BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 005481
         (694 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score = 1046 bits (2705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/686 (71%), Positives = 584/686 (85%), Gaps = 1/686 (0%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           +SERQRLA  LR CSKN L D G+Q+H A V MGF FDL++NNDLIDMY KC  ++ AC+
Sbjct: 1   MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VFD+MLERNVVSWTALMCG+LQ GNAK  L+L C+MG S VKPNEFT ST++KA G L  
Sbjct: 61  VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV 120

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           VENGMQIHGMC+KSGFEW  VVGN+ IDMYSKCGRI  A ++F+ MP ++L++WNAMIAG
Sbjct: 121 VENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAG 180

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +   G   K L+LF++MQ  GE+PDEFTFTSTLKACG+LG++ GGTQIH  LIT GFP S
Sbjct: 181 HTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPIS 240

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           ++ +IA ++VD Y KCG L EA++VFD IEQK++ISWS+LI G+AQE NL EAM+LFRQL
Sbjct: 241 IRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL 300

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           RE    VDGFVLS MMGVFAD ALVEQGKQ+H Y  KVPSGLD SV+NSI+DMYLKCGL 
Sbjct: 301 RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLT 360

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +EA  LF+EM V+NVV+WTV+ITGYGKHGL ++A+ LF +M LD +E D VAYLA+LSAC
Sbjct: 361 EEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGL+ ESQEYFSRLCN+ +MKP IEHY+C+VD LGRAG+L EAKNLIE+M +KP+  I
Sbjct: 421 SHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI 480

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           WQTLLSACRVHG+LE+GREVGEIL R+D DNPVNYVMMSNI+A+AG W ECER+RKL ++
Sbjct: 481 WQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKA 540

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           KGLKK AG+SWVE++KEIHFFYGGDDTHPLTEKIH++L EME+R+KEE+G+ YG+++ALH
Sbjct: 541 KGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALH 600

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EESKEE+LRVHSEKLAIGLALV  G+ E+ G VIRVFKNLRVCGDCHEFIKGLSKIL
Sbjct: 601 DVEEESKEENLRVHSEKLAIGLALVCDGM-EKKGGVIRVFKNLRVCGDCHEFIKGLSKIL 659

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           K VFVVRDA RFHRFE G+CSCGDYW
Sbjct: 660 KKVFVVRDANRFHRFEDGLCSCGDYW 685


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/654 (73%), Positives = 560/654 (85%), Gaps = 1/654 (0%)

Query: 41  MGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
           MGF FDLML+NDLI MY KCG +  AC VFD+ML+RNVVSWTALMCG +QNGN    L L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 101 FCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
           F +MG S VKPN+FT STN+KA G+L+ ++ G QIH +C+K+GF+   VVGNSIIDMYSK
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           CGRINEAA MF+VMP ++LI+WNAMIAGY +AG+ +K L+LF+KMQE G   DEFTFTST
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           LKAC  LG++  G QIH FLIT GF YSV T +AG+L+D YVKCG L  ARRVF  IE+K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            VISW++LILGYAQE NLAE+MELFRQLRE S+QVDGF+LSSMMGVFADFALV+QGKQ+H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           A+A KVPSG+D SV NSI+DMYLKCG+I+EA  LF+EMP +NV++WTV+ITGYGKHGL K
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ LF +M LD  EPD V YLAVL  CSHSGLVE+ QEYFSRLC+   +K R+EHY+C+
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           VD LGRAGRL EAKNL++SMP++ ++ IWQTLLSACRVHGDLELG+EVG ILLRLD +NP
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
           VNYVMMSNI+ADAG W ECER+R+L +SK LKK AGRSWVE+DKE+HFFYGGDDTHPLTE
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTE 540

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           KIH++L EME+RMKEELG+VYGVKYALHD++EESK ++LRVHSEKLAIGLALV GGL E+
Sbjct: 541 KIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGL-EE 599

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             KVIRVFKNLRVCGDCHEFIKGLSKIL++VFVVRDA RFHRFE G+CSC DYW
Sbjct: 600 GRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 233/447 (52%), Gaps = 20/447 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            + +L+ C     LD G Q+H   VK GF    ++ N +IDMY+KCG +N A  +F+ M 
Sbjct: 76  FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP 135

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN++SW A++ G+   G  +  L LF +M       +EFT ++ +KA   L +++ G Q
Sbjct: 136 VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQ 195

Query: 135 IHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           IH   +  GF +  N  V  ++ID+Y KCG++  A R+F  +  K +I+W A+I GY   
Sbjct: 196 IHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQE 255

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G   + + LFR+++E     D F  +S +        V  G Q+H F I    P  V   
Sbjct: 256 GNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK--VPSGVDIS 313

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  S++D Y+KCG + EA R+F  +  ++VISW+ +I GY +     EA+ LF +++  S
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS--GLDTSVSN--SIVDMYLKCGLI 368
            + D     +++   +   LVE+G++   Y +++ S  G+   V +   +VD+  + G +
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQE---YFSRLCSYHGIKARVEHYACMVDLLGRAGRL 430

Query: 369 DEATELFNEMPVK-NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            EA  L + MP++ NV  W  +++    HG   L KE  G+  +  LD   P  V Y+ +
Sbjct: 431 KEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLR--LDSENP--VNYVMM 486

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMK 451
            +  + +G  +E  E    L   K++K
Sbjct: 487 SNIYADAGYWKEC-ERIRELVKSKKLK 512


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/687 (61%), Positives = 525/687 (76%), Gaps = 3/687 (0%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++RQ L   LR C++  L D G Q+H  L+K G   +L+ +N LIDMY KC E   A  V
Sbjct: 4   NQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD M ERNVVSW+ALM G + NG+ K  LSLF +MG   + PNEFT STN+KA G+L+++
Sbjct: 64  FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G+QIHG C+K GFE    VGNS++DMYSKCGRINEA ++F  +  +SLI+WNAMIAG+
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183

Query: 190 VLAGYSDKGLLLFRKMQEHG--EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           V AGY  K L  F  MQE    E PDEFT TS LKAC S G +  G QIHGFL+ SGF  
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                I GSLVD YVKCG L  AR+ FD I++K++ISWSSLILGYAQE    EAM LF++
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+E + Q+D F LSS++GVFADFAL+ QGKQ+ A A K+PSGL+TSV NS+VDMYLKCGL
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +DEA + F EM +K+V++WTV+ITGYGKHGL K++V +F +ML  ++EPD V YLAVLSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSHSG+++E +E FS+L     +KPR+EHY+C+VD LGRAGRL EAK+LI++MP+KP++ 
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           IWQTLLS CRVHGD+ELG+EVG+ILLR+D  NP NYVMMSN++  AG WNE    R+L  
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGN 543

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            KGLKK AG SWVE+++E+HFF  G+D+HPLT  I + L E E+R++EELG+VYG+K+ L
Sbjct: 544 IKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL 603

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HDI +ESKEE+LR HSEKLAIGLAL  GGLN Q GK IRVFKNLRVC DCHEFIKGLSKI
Sbjct: 604 HDIDDESKEENLRAHSEKLAIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIKGLSKI 662

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K+ +VVRDA RFH FE G CSCGDYW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/654 (63%), Positives = 510/654 (77%), Gaps = 3/654 (0%)

Query: 42   GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF 101
            G   +L+ +N LIDMY KC E   A  VFD M ERNVVSWTALM G + NG+    LSLF
Sbjct: 399  GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 102  CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC 161
             +MG   + PNEFT STN+KA G+L+++E G+QIHG C+K GFE    VGNS++DMYSKC
Sbjct: 459  TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC 518

Query: 162  GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG--EIPDEFTFTS 219
            GRINEA ++F  M  +SLI+WNAMIAGYV AGY  + L  F  MQE    E PDEFT TS
Sbjct: 519  GRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578

Query: 220  TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
             LKAC S G +  G QIHGFL+ SGF       I GSLVD YVKCG L  AR+ FD I++
Sbjct: 579  LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638

Query: 280  KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
            K++ISWSSLILGYAQE +  EAM LF++L+E S Q+D FVLSS++GVFADFAL++QGKQ+
Sbjct: 639  KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQM 698

Query: 340  HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
             A   K+PSGL+TSVSNS+VDMYLKCGL+DEA + F EM +K+V++WTV+ITGYGKHGL 
Sbjct: 699  QALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLG 758

Query: 400  KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
            K+AV +F KML  ++EPD V YLAVLSACSHSG+++E +E FS+L   + +KPR+EHY+C
Sbjct: 759  KKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYAC 818

Query: 460  IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
            +VD LGRAGRL EAK+L+++MP+KP++ IWQTLLS CRVHGD+ELG+EVG+ILLR+DG N
Sbjct: 819  VVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKN 878

Query: 520  PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
            P NYVMMSN++  AG WNE    R+L   KGL+K AG SWVE+++E+HFF  G+D+HPLT
Sbjct: 879  PANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLT 938

Query: 580  EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
              I + L E+E+R++EELG+VYG+K+ LHDI +ESKEE+LR HSEKLAIGLAL  GGLN 
Sbjct: 939  LVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN- 997

Query: 640  QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
            Q GK IRVFKNLRVC DCHEFIKGLSKI K+ +VVRDA RFH FE G CSCGDY
Sbjct: 998  QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 220/409 (53%), Gaps = 19/409 (4%)

Query: 5   SFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           S SL +E  R          + +L+ C     L+ G+Q+HG  +K+GF   + + N L+D
Sbjct: 454 SLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 513

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK--PNE 113
           MY+KCG +N A  VF  M+ R+++SW A++ G++  G     L+ F  M  + +K  P+E
Sbjct: 514 MYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDE 573

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMF 171
           FTL++ +KA      +  G QIHG  ++SGF    +  +  S++D+Y KCG +  A + F
Sbjct: 574 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAF 633

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D +  K++I+W+++I GY   G   + + LF+++QE     D F  +S +        + 
Sbjct: 634 DQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQ 693

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G Q+   ++    P  ++T ++ SLVD Y+KCG + EA + F  ++ K VISW+ +I G
Sbjct: 694 QGKQMQALVVK--LPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           Y +     +A+ +F ++   +++ D     +++   +   ++++G+++ +   +   G+ 
Sbjct: 752 YGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET-QGIK 810

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
             V +   +VD+  + G + EA  L + MP+K NV  W  +++    HG
Sbjct: 811 PRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHG 859



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 256/492 (52%), Gaps = 35/492 (7%)

Query: 79  VSWTALMCGFLQNGNAKA-----CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           ++W  L C  L  G++++     CL  FCQ    S    +  +  N      +    +  
Sbjct: 336 MNWPNLGCNRLCAGSSESQTATLCLCSFCQHLLHSPTEEDSHVLENCYVLEFIIFTNSNF 395

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++ G    SG   N +  N +IDMY KC     A ++FD MP +++++W A+++G+VL G
Sbjct: 396 RLSG----SGL--NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNG 449

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             +  L LF +M   G  P+EFTF++ LKACG L ++  G QIHGF +  GF   V+  +
Sbjct: 450 DLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE--V 507

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLVD Y KCG + EA +VF  +  +S+ISW+++I GY      + A+  F  ++E  +
Sbjct: 508 GNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKI 567

Query: 314 Q--VDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGL 367
           +   D F L+S++   +   ++  GKQIH +  +     PS    +++ S+VD+Y+KCG 
Sbjct: 568 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS--SATITGSLVDLYVKCGN 625

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +  A + F+++  K +++W+ +I GY + G   EA+GLF+++     + D     +++  
Sbjct: 626 LFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGV 685

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEH--YSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            +   L+++ ++  + +    ++   +E    + +VD   + G +DEA+     M +K  
Sbjct: 686 FADFALLQQGKQMQALVV---KLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDV 742

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDN----PVNYVMMSNIHADAGSWNECER 541
           I+ W  +++    HG   LG++   I  ++   N     V Y+ + +  + +G   E E 
Sbjct: 743 IS-WTVMITGYGKHG---LGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 798

Query: 542 L-RKLARSKGLK 552
           L  KL  ++G+K
Sbjct: 799 LFSKLLETQGIK 810


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/651 (62%), Positives = 504/651 (77%), Gaps = 3/651 (0%)

Query: 45   FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
             +L+ +N LIDMY KC E   A  VFD M ERNVVSW+ALM G + NG+ K  LSLF +M
Sbjct: 410  LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 105  GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
            G   + PNEFT STN+KA G+L+++E G+QIHG C+K GFE    VGNS++DMYSKCGRI
Sbjct: 470  GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 165  NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG--EIPDEFTFTSTLK 222
            NEA ++F  +  +SLI+WNAMIAG+V AGY  K L  F  MQE    E PDEFT TS LK
Sbjct: 530  NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 223  ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            AC S G +  G QIHGFL+ SGF       I GSLVD YVKCG L  AR+ FD I++K++
Sbjct: 590  ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 283  ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
            ISWSSLILGYAQE    EAM LF++L+E + Q+D F LSS++GVFADFAL+ QGKQ+ A 
Sbjct: 650  ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 343  AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
            A K+PSGL+TSV NS+VDMYLKCGL+DEA + F EM +K+V++WTV+ITGYGKHGL K++
Sbjct: 710  AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 403  VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
            V +F +ML  ++EPD V YLAVLSACSHSG+++E +E FS+L     +KPR+EHY+C+VD
Sbjct: 770  VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 463  SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
             LGRAGRL EAK+LI++MP+KP++ IWQTLLS CRVHGD+ELG+EVG+ILLR+D  NP N
Sbjct: 830  LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889

Query: 523  YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
            YVMMSN++  AG WNE    R+L   KGLKK AG SWVE+++E+HFF  G+D+HPLT  I
Sbjct: 890  YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVI 949

Query: 583  HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
             + L E E+R++EELG+VYG+K+ LHDI +ESKEE+LR HSEKLAIGLAL  GGLN Q G
Sbjct: 950  QETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN-QKG 1008

Query: 643  KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
            K IRVFKNLRVC DCHEFIKGLSKI K+ +VVRDA RFH FE G CSCGDY
Sbjct: 1009 KTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 220/409 (53%), Gaps = 19/409 (4%)

Query: 5   SFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           S SL SE  R          + +L+ C     L+ G+Q+HG  +K+GF   + + N L+D
Sbjct: 462 SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 521

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK--PNE 113
           MY+KCG +N A  VF ++++R+++SW A++ GF+  G     L  F  M  +++K  P+E
Sbjct: 522 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 581

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMF 171
           FTL++ +KA      +  G QIHG  ++SGF    +  +  S++D+Y KCG +  A + F
Sbjct: 582 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 641

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D +  K++I+W+++I GY   G   + + LF+++QE     D F  +S +        + 
Sbjct: 642 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 701

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G Q+    +    P  ++T +  S+VD Y+KCG + EA + F  ++ K VISW+ +I G
Sbjct: 702 QGKQMQALAVK--LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 759

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           Y +     +++ +F ++   +++ D     +++   +   ++++G+++ +   +   G+ 
Sbjct: 760 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET-HGIK 818

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
             V +   +VD+  + G + EA  L + MP+K NV  W  +++    HG
Sbjct: 819 PRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/691 (57%), Positives = 504/691 (72%), Gaps = 9/691 (1%)

Query: 11  ERQRL-ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ER+R+ AD LR  ++   L  GVQLH AL+K+GF  D MLNN+LIDMYAKCG+++ A  V
Sbjct: 2   ERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEV 61

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD M ERNVVSWTALM GFL +G A+ CL LF +M  S   PNEFTLS  +KA G     
Sbjct: 62  FDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGT 119

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G+QIHG+C+++GFE + VV NS++ MYSK     +A R+FDV+P+++L TWN+MI+GY
Sbjct: 120 RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGY 179

Query: 190 VLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
             AG     LL+FR+MQ  H E PDEFTF S LKAC  LG+   G Q+H  +   G   +
Sbjct: 180 AHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++AG+L+D YVKC  L  A +VFD +E+++ I W+++I+G+AQE  + EAM LFR+ 
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRF 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++ DG VLSS++ VFADFALVEQGKQ+H Y AK P+GLD SV+NS+VDMYLKCGL 
Sbjct: 300 WSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLT 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            EA   F EMP +NVV+WT +I G GKHG  +EA+ LF +M  + VE D VAYLA+LSAC
Sbjct: 360 GEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGLV+E + YFSR+C D+RM+P+ EHY+C+VD LGRAG L EAK LI SMP++P++ +
Sbjct: 420 SHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 479

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           WQTLLSACRVH D+ +GREVG++LL +DGDNPVNYVM+SNI A+AG W EC+ +R   R 
Sbjct: 480 WQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRR 539

Query: 549 KGLKKVAGRSWVEVDKEIHFFY-GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
           KGL+K  G SW EVDKE+HFFY GGDD HP    I + L E+E RM+E LG+    + AL
Sbjct: 540 KGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCAL 599

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVR----GGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
           HD+ EES+ ESLR HSE+LA+GL L+R           G+V+RV+KNLRVCGDCHEF+KG
Sbjct: 600 HDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKG 659

Query: 664 LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LS +++ V VVRDA RFHRF+ G CSC DYW
Sbjct: 660 LSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/697 (56%), Positives = 505/697 (72%), Gaps = 8/697 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           + F  +  R+ +AD LR  ++   L  GVQLH AL+K+GF  D MLNN+LIDMYAKCG++
Sbjct: 192 LGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKL 251

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           + A  VFD M ERNVVSWTALM GFL +G A+ CL LF +M  S   PNEFTLS  +KA 
Sbjct: 252 HMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC 311

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
           G       G+QIHG+C+++GFE + VV NS++ MYSK     +A R+FDV+P+++L TWN
Sbjct: 312 G--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWN 369

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           +MI+GY  AG     LL+FR+MQ  H E PDEFTF S LKAC  LG+   G Q+H  +  
Sbjct: 370 SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAV 429

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G   +   ++AG+L+D YVKC  L  A +VFD +E+++ I W+++I+G+AQE  + EAM
Sbjct: 430 RGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAM 489

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            LFR+     ++ DG VLSS++ VFADFALVEQGKQ+H Y AK P+GLD SV+NS+VDMY
Sbjct: 490 CLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMY 549

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           LKCGL  EA   F EMP +NVV+WT +I G GKHG  +EA+ LF +M  + VE D VAYL
Sbjct: 550 LKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYL 609

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           A+LSACSHSGLV+E + YFSR+C D+RM+P+ EHY+C+VD LGRAG L EAK LI SMP+
Sbjct: 610 ALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPM 669

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +P++ +WQTLLSACRVH D+ +GREVG++LL +DGDNPVNYVM+SNI A+AG W EC+ +
Sbjct: 670 EPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGI 729

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFY-GGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           R   R KGL+K  G SW EVDKE+HFFY GGDD HP    I + L E+E RM+E LG+  
Sbjct: 730 RGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSG 789

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVR----GGLNEQPGKVIRVFKNLRVCGDC 657
             + ALHD+ EES+ ESLR HSE+LA+GL L+R           G+V+RV+KNLRVCGDC
Sbjct: 790 DARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDC 849

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HEF+KGLS +++ V VVRDA RFHRF+ G CSC DYW
Sbjct: 850 HEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/691 (57%), Positives = 504/691 (72%), Gaps = 9/691 (1%)

Query: 11  ERQRL-ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ER+R+ AD LR  ++   L  GVQLH AL+K+GF  D MLNN+LIDMYAKCG+++ A  V
Sbjct: 2   ERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEV 61

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD M ERNVVSWTALM GFL +G A+ CL LF +M  S   PNEFTLS  +KA G     
Sbjct: 62  FDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGT 119

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G+QIHG+C+++GFE + VV NS++ MYSK     +A R+FDV+P+++L TWN+MI+GY
Sbjct: 120 RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGY 179

Query: 190 VLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
             AG     LL+FR+MQ  H E PDEFTF S LKAC  LG+   G Q+H  +   G   +
Sbjct: 180 AHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++AG+L+D YVKC  L  A +VFD +E+++ I W+++I+G+AQE  + EAM LFR+ 
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRF 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++ DG VLSS++ VFADFALVEQGKQ+H Y AK P+GLD SV+NS+VDMYLKCGL 
Sbjct: 300 WSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLT 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            EA   F EMP +NVV+WT +I G GKHG  +EA+ LF +M  + VE D VAYLA+LSAC
Sbjct: 360 GEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGLV+E + YFSR+C D+RM+P+ EHY+C+VD LGRAG L EAK LI SMP++P++ +
Sbjct: 420 SHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 479

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           WQTLLSACRVH D+ +GREVG++LL +DGDNPVNYVM+SNI A+AG W EC+ +R   R 
Sbjct: 480 WQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRR 539

Query: 549 KGLKKVAGRSWVEVDKEIHFFY-GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
           KGL+K  G SW EVDKE+HFFY GGDD HP    I + L E+E RM+E LG+    + AL
Sbjct: 540 KGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCAL 599

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVR----GGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
           HD+ EES+ ESLR HSE+LA+GL L+R           G+V+RV+KNLRVCGDCHEF+KG
Sbjct: 600 HDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKG 659

Query: 664 LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LS +++ V VVRDA RFHRF+ G CSC DYW
Sbjct: 660 LSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/707 (55%), Positives = 508/707 (71%), Gaps = 21/707 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           +  R+ +AD LR  + +  +  G QLHGAL+K+GF  D ML N+LIDMYAKCGE+  A  
Sbjct: 1   MERRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGE 60

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLS 127
           VF  M ERNVVSWTALM GFL++G+A+ CL L   M S S V PNEFTLS ++KA GV+ 
Sbjct: 61  VFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVG 120

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            +  G+ IHG C+++GFE + VV NS++ +YSK GRI +A R+FD    ++L+TWNAMI+
Sbjct: 121 DMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMIS 180

Query: 188 GYVLAGYSDKGLLLFRKMQ-----EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           GY  AG+    LL+FR+MQ     E    PDEFTF S LKACGSLG+   G Q+H  ++ 
Sbjct: 181 GYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVI 240

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            G   +   ++AG+L+D YVKC CL+  A +VF+ +EQK+ I W+++I+G+AQE  + EA
Sbjct: 241 RGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEA 300

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           MELF +     ++ DG VLSS++GVFADFALVEQG+Q+H Y  K P+GLD SV+NS++DM
Sbjct: 301 MELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDM 360

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCGL DEA   F E+P +NVV+WT +I G GKHG  +EA+ +F +M  + VEPD VAY
Sbjct: 361 YHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAY 420

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           LA+LSACSHSGLVEE + YFS + +D+R++PR EHY+C+VD LGRAG L EAK+L+ +MP
Sbjct: 421 LALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMP 480

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           + P++ +WQTLLSACRVH ++ +GRE GE LL +DGDNPVNYVM+SNI A+AG W EC+R
Sbjct: 481 MAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQR 540

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFY-GGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           +R   R +GL+K  G SWVEV KE HFFY GGDD+HP    I  VL ++E+ M+E LG+ 
Sbjct: 541 VRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYS 600

Query: 601 YG-----VKYALHDIQEESKEESLRVHSEKLAIGLALV--------RGGLNEQPGKVIRV 647
            G      + ALHD+ EES+ ESLR HSE+LA+GL L+         G    +  +VIRV
Sbjct: 601 PGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRV 660

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +KNLRVCGDCHEF KGLS ++  V VVRDA RFHRFE GVCSC DYW
Sbjct: 661 YKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/567 (63%), Positives = 464/567 (81%), Gaps = 1/567 (0%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           ++ G Q+HG+  K GF+   VVGNS+IDMYSKCG + EAAR+F+ +P +++I+WNAMIAG
Sbjct: 20  LDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG 79

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y      ++ L LFR+M+E GE+PD +T++S+LKAC    + G G QIH  LI  GFPY 
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            ++ +AG+LVD YVKC  + EAR+VFD IE+KSV+SWS+LILGYAQE+NL EAM+LFR+L
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFREL 199

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGL 367
           RE   ++DGFVLSS++GVFADFAL+EQGKQ+HAY  KVP GL + SV+NS++DMY+KCGL
Sbjct: 200 RESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGL 259

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
             EA  LF EM  +NVV+WTV+ITGYGKHG+  +AV LF +M  + +EPD V YLAVLSA
Sbjct: 260 TVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSA 319

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSHSGL++E ++YFS LC+++++KP++EHY+C+VD LGR GRL EAKNLIE MP+KP++ 
Sbjct: 320 CSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVG 379

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           IWQTLLS CR+HGD+E+G++VGEILLR +G+NP NYVM+SN++A AG W E E++R+  +
Sbjct: 380 IWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLK 439

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            KGLKK AGRSWVE+DKEIH FY GD  HPL E+IH+VL EMEKR+KEE+G+V+ + ++L
Sbjct: 440 RKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSL 499

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD++EESK ESLRVHSEKLAIGL LVR GL  +  +VIR+FKNLRVCGDCH FIKGLSK+
Sbjct: 500 HDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKV 559

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LK+ FVVRDA RFHRFE G+CSCGDYW
Sbjct: 560 LKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 238/440 (54%), Gaps = 16/440 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           +SE + L   L  CSK  LLD G Q+HG + K+GF    ++ N +IDMY+KCG +  A  
Sbjct: 1   MSESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAAR 60

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VF+ +  RNV+SW A++ G+    N +  L+LF +M      P+ +T S+++KA     +
Sbjct: 61  VFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADA 120

Query: 129 VENGMQIHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
              GMQIH   ++ GF +     V  +++D+Y KC R+ EA ++FD +  KS+++W+ +I
Sbjct: 121 AGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLI 180

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY       + + LFR+++E     D F  +S +        +  G Q+H + I    P
Sbjct: 181 LGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIK--VP 238

Query: 247 YS-VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
           Y  ++  +A S++D Y+KCG  VEA  +F  + +++V+SW+ +I GY +     +A+ELF
Sbjct: 239 YGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ---IHAYAAKVPSGLDTSVSNSIVDMY 362
            +++E  ++ D     +++   +   L+++GK+   I     K+   ++      +VD+ 
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYA--CMVDLL 356

Query: 363 LKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK--EAVGLFRKMLLDDVEPDGV 419
            + G + EA  L  +MP+K NV  W  +++    HG  +  + VG   ++LL     +  
Sbjct: 357 GRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVG---EILLRREGNNPA 413

Query: 420 AYLAVLSACSHSGLVEESQE 439
            Y+ V +  +H+G  +ES++
Sbjct: 414 NYVMVSNMYAHAGYWKESEK 433



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 10/206 (4%)

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +L+ ++   +   L++QGKQ+H    K+   +   V NS++DMY KCG++ EA  +FN +
Sbjct: 6   LLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL 65

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           PV+NV++W  +I GY      +EA+ LFR+M      PDG  Y + L ACS +    E  
Sbjct: 66  PVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGM 125

Query: 439 EYFSRLCNDKRMKPRIEHYS---CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +  + L   +   P +   +    +VD   +  R+ EA+ + + +  K S+  W TL+  
Sbjct: 126 QIHAALI--RHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEK-SVMSWSTLILG 182

Query: 496 CRVHGDL----ELGREVGEILLRLDG 517
                +L    +L RE+ E   R+DG
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRMDG 208


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/714 (53%), Positives = 505/714 (70%), Gaps = 24/714 (3%)

Query: 2   NRVSFSL----VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMY 57
           N V+F      +  R+ +AD LR  +K   L  GVQLHGAL K+GF  D ML N+LIDMY
Sbjct: 203 NPVAFPFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMY 262

Query: 58  AKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTL 116
           AKCGE++ A  VF  M +RNVVSWTALM GFLQ+G+A  CL L  +M  +S   PNE+TL
Sbjct: 263 AKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTL 322

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP- 175
           S ++KA  V   +  G+ IHG+C+++G+E + VV +S++ +YSK GRI +A R+FD    
Sbjct: 323 SASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGL 382

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTSTLKACGSLGS 229
            + L TWNAMI+GY  AG+    LL+FR+M       E    PDEFTF S LKACG LG+
Sbjct: 383 GRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGA 442

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
              G Q+H  +  SGF  +   ++AG+LVD YVKCG L  A +VF+ +E+K+ I W++++
Sbjct: 443 PREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVV 502

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
           +G+AQE  + EA+ELFR+      + D  VLSS++GV ADFALVEQG+Q+H Y  K P+G
Sbjct: 503 VGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAG 562

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            D S  NSIVDMYLKCGL DEA  +F E+P +NVV+WT +I G GKHGL +EAV +F +M
Sbjct: 563 TDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEM 622

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
               VEPD V YLA+LSACSH+GLV+E + YFS +  D+ ++P+ EHY+C+VD LGRAG 
Sbjct: 623 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 682

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           L EA++LI +MP++P++ +WQTLLSACRVH D+ +GRE G++LL +DGDNPVNYV +SN+
Sbjct: 683 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNV 742

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD--THPLTEKIHQVLM 587
            A+AG+W EC ++R   R +GLKK  G SWVE+ KE+HFFYGG D   HP    I +VL 
Sbjct: 743 FAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLR 802

Query: 588 EMEKRMKEELGFVY-GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN------EQ 640
           ++E R++E+LG+    V++ALHD+ EES+ ESLR HSE+LA+GL L+R G++       Q
Sbjct: 803 DVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQ 862

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           P   IRV+KNLRVCGDCHEF KGLS +++   VVRDA RFHRFE G CSC DYW
Sbjct: 863 P---IRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/694 (54%), Positives = 501/694 (72%), Gaps = 10/694 (1%)

Query: 11  ERQRL-ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ERQ++ A  LR  +++  L  GVQLHGA+ KMGF  D ML N+LIDMY KCGE++ AC V
Sbjct: 2   ERQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEV 61

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSS 128
           F  M +RNVVSWTALM GFL++G+A  CL L  +M ++S   PNE+TLS ++KA  V+  
Sbjct: 62  FGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGD 121

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI-TWNAMIA 187
              G+ IHG+C+++G++ + VV +S++ +YSK GRI +A R+FD     S I TWNAM++
Sbjct: 122 TAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVS 181

Query: 188 GYVLAGYSDKGLLLFRKMQEH--GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           GY  AG+    LL+FR+M+ H     PDEFTF S LKAC  LG+   G Q+H  +  SGF
Sbjct: 182 GYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGF 241

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             +   ++AG+LVD YVKC  L  A +VF+ +E+K+VI W+++++G+AQE  + EA+ELF
Sbjct: 242 STASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELF 301

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           R+      + D  VLSS++GV ADFALVEQG+Q+H Y  K P+G D S  NSIVDMYLKC
Sbjct: 302 RRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKC 361

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           GL DEA  +F EM   NVV+WT ++ G GKHGL +EAV LF +M    VEPD V YLA+L
Sbjct: 362 GLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALL 421

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACSH+GLV+E + YFS +  D+ ++P+ EHY+C+VD LGRAG L EA++LI +MP++P+
Sbjct: 422 SACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPT 481

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
           + +WQTLLSACRVH D+ +GRE G++LL +DGDNPVNYV +SN+ A+AG W EC ++R  
Sbjct: 482 VGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDA 541

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGG---DDTHPLTEKIHQVLMEMEKRMKEELGF-VY 601
            R +GLKK  G SWVEV KE+HFFYGG   ++THP    I +VL +ME RM+E+LG+   
Sbjct: 542 MRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNAD 601

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN-EQPGKVIRVFKNLRVCGDCHEF 660
             ++ALHD+ EES+ ESLR HSE+LA+GL L+R G++    G+ IRV+KNLRVCGDCHEF
Sbjct: 602 DARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEF 661

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KGLS +++   VVRDA RFHRFE G CSC DYW
Sbjct: 662 FKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/648 (54%), Positives = 469/648 (72%), Gaps = 9/648 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEF 114
           MY KCGE++ AC VF  M +RNVVSWTALM GFL++G+A  CL L  +M ++S   PNE+
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           TLS ++KA  V+     G+ IHG+C+++G++ + VV +S++ +YSK GRI +A R+FD  
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 175 PAKSLI-TWNAMIAGYVLAGYSDKGLLLFRKMQEH--GEIPDEFTFTSTLKACGSLGSVG 231
              S I TWNAM++GY  AG+    LL+FR+M+ H     PDEFTF S LKAC  LG+  
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G Q+H  +  SGF  +   ++AG+LVD YVKC  L  A +VF+ +E+K+VI W+++++G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           +AQE  + EA+ELFR+      + D  VLSS++GV ADFALVEQG+Q+H Y  K P+G D
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            S  NSIVDMYLKCGL DEA  +F EM   NVV+WT ++ G GKHGL +EAV LF +M  
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             VEPD V YLA+LSACSH+GLV+E + YFS +  D+ ++P+ EHY+C+VD LGRAG L 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           EA++LI +MP++P++ +WQTLLSACRVH D+ +GRE G++LL +DGDNPVNYV +SN+ A
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG---DDTHPLTEKIHQVLME 588
           +AG W EC ++R   R +GLKK  G SWVEV KE+HFFYGG   ++THP    I +VL +
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 589 MEKRMKEELGF-VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN-EQPGKVIR 646
           ME RM+E+LG+     ++ALHD+ EES+ ESLR HSE+LA+GL L+R G++    G+ IR
Sbjct: 541 METRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIR 600

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V+KNLRVCGDCHEF KGLS +++   VVRDA RFHRFE G CSC DYW
Sbjct: 601 VYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 19/389 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
           L+ SL+ C        GV +HG  V+ G+    ++ + L+ +Y+K G +  A  VFD   
Sbjct: 62  LSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAG 121

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVEN 131
           L   + +W A++ G+   G+ +  L +F +M       +P+EFT ++ +KA   L +   
Sbjct: 122 LGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATRE 181

Query: 132 GMQIHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           G Q+H     SGF    N ++  +++DMY KC R+  A ++F+ +  K++I W A++ G+
Sbjct: 182 GAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGH 241

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G   + L LFR+    G  PD    +S +        V  G Q+H + I    P   
Sbjct: 242 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD--PTGT 299

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
                 S+VD Y+KCG   EA R+F  +   +V+SW++++ G  +     EA+ LF ++R
Sbjct: 300 DVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMR 359

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS------IVDMYL 363
              ++ D     +++   +   LV++ ++  +   +     D +V         +VD+  
Sbjct: 360 AGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR-----DRTVRPKAEHYACMVDLLG 414

Query: 364 KCGLIDEATELFNEMPVKNVV-TWTVIIT 391
           + G + EA +L   MP++  V  W  +++
Sbjct: 415 RAGELREARDLIRTMPMEPTVGVWQTLLS 443


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/678 (40%), Positives = 423/678 (62%), Gaps = 11/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C     L  G ++H  ++  GF  D+++   L  MY KCG +  A  VFD+M +R+V
Sbjct: 127 IKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDV 186

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW A++ G+ QNG     L+LF +M  + +KPN  TL + +     L ++E G QIH  
Sbjct: 187 VSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCY 246

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SG E + +V N +++MY+KCG +N A ++F+ MP + + +WNA+I GY L     + 
Sbjct: 247 AIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEA 306

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F +MQ  G  P+  T  S L AC  L ++  G QIHG+ I SGF      V+  +LV
Sbjct: 307 LAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF--ESNDVVGNALV 364

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KCG +  A ++F+ + +K+V++W+++I GY+Q  +  EA+ LF +++ + ++ D F
Sbjct: 365 NMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSF 424

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFN 376
            + S++   A F  +EQGKQIH Y  +  SG +++V     +VD+Y KCG ++ A +LF 
Sbjct: 425 AIVSVLPACAHFLALEQGKQIHGYTIR--SGFESNVVVGTGLVDIYAKCGNVNTAQKLFE 482

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            MP ++VV+WT +I  YG HG  ++A+ LF KM     + D +A+ A+L+ACSH+GLV++
Sbjct: 483 RMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQ 542

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +YF  + +D  + P++EHY+C+VD LGRAG LDEA  +I++M ++P   +W  LL AC
Sbjct: 543 GLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H ++ELG +  + L  LD DN   YV++SNI+A+A  W +  +LRK+ + KG+KK  G
Sbjct: 603 RIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPG 662

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S V V +++  F  GD THP +E+I+ +L  + ++M++  G+V     AL D++EE+KE
Sbjct: 663 CSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKA-GYVPNTNLALQDVEEEAKE 721

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLAI   ++    N  PG  IR+ KNLRVC DCH   K +SKI+    +VRD
Sbjct: 722 NILSSHSEKLAISFGII----NTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRD 777

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH  + G CSCGDYW
Sbjct: 778 ANRFHHVKNGFCSCGDYW 795



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/432 (32%), Positives = 241/432 (55%), Gaps = 8/432 (1%)

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           +  N V W   + G+++NG     L L+ QM  + + P++    + IKA G  S ++ G 
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +  GFE + +VG ++  MY+KCG +  A ++FD MP + +++WNA+IAGY   G
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L LF +MQ +G  P+  T  S +  C  L ++  G QIH + I SG    V  ++
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDV--LV 258

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              LV+ Y KCG +  A ++F+ +  + V SW+++I GY+      EA+  F +++ R +
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEA 371
           + +   + S++   A    +EQG+QIH YA +  SG +++  V N++V+MY KCG ++ A
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIR--SGFESNDVVGNALVNMYAKCGNVNSA 376

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            +LF  MP KNVV W  II+GY +HG   EA+ LF +M    ++PD  A ++VL AC+H 
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF 436

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             +E+ ++           +  +   + +VD   + G ++ A+ L E MP +  ++ W T
Sbjct: 437 LALEQGKQIHGYTIRSG-FESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS-WTT 494

Query: 492 LLSACRVHGDLE 503
           ++ A  +HG  E
Sbjct: 495 MILAYGIHGHGE 506



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 233/417 (55%), Gaps = 12/417 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+  L L+ G Q+H   ++ G   D+++ N L++MYAKCG +N A  +F++M 
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V SW A++ G+  N      L+ F +M    +KPN  T+ + + A   L ++E G Q
Sbjct: 284 IRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQ 343

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  ++SGFE N VVGN++++MY+KCG +N A ++F+ MP K+++ WNA+I+GY   G+
Sbjct: 344 IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGH 403

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +MQ  G  PD F   S L AC    ++  G QIHG+ I SGF  +V  V+ 
Sbjct: 404 PHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNV--VVG 461

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             LVD Y KCG +  A+++F+ + ++ V+SW+++IL Y    +  +A+ LF +++E   +
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTK 521

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
           +D    ++++   +   LV+QG Q +    K   GL   + +   +VD+  + G +DEA 
Sbjct: 522 LDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEAN 580

Query: 373 ELFNEM---PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +   M   P  NV  W  ++     H      +G      L +++PD   Y  +LS
Sbjct: 581 GIIKNMSLEPDANV--WGALLGACRIH--CNIELGEQAAKHLFELDPDNAGYYVLLS 633


>gi|223949281|gb|ACN28724.1| unknown [Zea mays]
          Length = 460

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/460 (56%), Positives = 342/460 (74%), Gaps = 5/460 (1%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +  SGF  +   ++AG+LVD YVKC  L  A +VF+ +E+K+VI W+++++G+AQE  + 
Sbjct: 1   MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 60

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+ELFR+      + D  VLSS++GV ADFALVEQG+Q+H Y  K P+G D S  NSIV
Sbjct: 61  EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 120

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMYLKCGL DEA  +F EM   NVV+WT ++ G GKHGL +EAV LF +M    VEPD V
Sbjct: 121 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 180

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            YLA+LSACSH+GLV+E + YFS +  D+ ++P+ EHY+C+VD LGRAG L EA++LI +
Sbjct: 181 TYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRT 240

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP++P++ +WQTLLSACRVH D+ +GRE G++LL +DGDNPVNYV +SN+ A+AG W EC
Sbjct: 241 MPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWREC 300

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG---DDTHPLTEKIHQVLMEMEKRMKEE 596
            ++R   R +GLKK  G SWVEV KE+HFFYGG   ++THP    I +VL +ME RM+E+
Sbjct: 301 HKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQ 360

Query: 597 LGF-VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN-EQPGKVIRVFKNLRVC 654
           LG+     ++ALHD+ EES+ ESLR HSE+LA+GL L+R G++    G+ IRV+KNLRVC
Sbjct: 361 LGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVC 420

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           GDCHEF KGLS +++   VVRDA RFHRFE G CSC DYW
Sbjct: 421 GDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 460



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 4/255 (1%)

Query: 38  LVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAK 95
           +   GFS   + +L   L+DMY KC  +  A  VF+++  +NV+ WTA++ G  Q G   
Sbjct: 1   MTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVT 60

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             L LF +   S  +P+   LS+ +      + VE G Q+H   +K     +   GNSI+
Sbjct: 61  EALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIV 120

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           DMY KCG  +EA RMF  M A ++++W  M+ G    G   + + LF +M+  G  PDE 
Sbjct: 121 DMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEV 180

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T+ + L AC   G V    +     I        K      +VD   + G L EAR +  
Sbjct: 181 TYLALLSACSHAGLVDECRRYFS-CIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIR 239

Query: 276 LIEQKSVIS-WSSLI 289
            +  +  +  W +L+
Sbjct: 240 TMPMEPTVGVWQTLL 254



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 4/164 (2%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L++ G Q+H   +K     D+   N ++DMY KCG  + A  +F +M   NVVSWT ++ 
Sbjct: 93  LVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVN 152

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G  ++G  +  ++LF +M +  V+P+E T    + A      V+   +    C++     
Sbjct: 153 GLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFS-CIRRDRTV 211

Query: 147 NPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLI-TWNAMIA 187
            P   +   ++D+  + G + EA  +   MP +  +  W  +++
Sbjct: 212 RPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLS 255


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/676 (38%), Positives = 419/676 (61%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L+ G ++H A++K G   +  L N L+ MYAKCG +  A  VFD + +RN+
Sbjct: 103 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNI 162

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++  F+           +  M  +  KP++ T  + + A      ++ G ++H  
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHME 222

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K+G E  P VG S++ MY+KCG I++A  +FD +P K+++TW  +IAGY   G  D  
Sbjct: 223 IAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVA 282

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L  KMQ+    P++ T+TS L+ C +  ++  G ++H ++I SG  Y  +  +  +L+
Sbjct: 283 LELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSG--YGREIWVVNALI 340

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG L EAR++F  +  + V++W++++ GYAQ     EA++LFR+++++ ++ D  
Sbjct: 341 TMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKM 400

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S +   +  A +++GK IH         LD  + +++V MY KCG +D+A  +FN+M
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQM 460

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +NVV WT +ITG  +HG  +EA+  F +M    ++PD V + +VLSAC+H GLVEE +
Sbjct: 461 SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           ++F  +  D  +KP +EHYSC VD LGRAG L+EA+N+I +MP +P  ++W  LLSACR+
Sbjct: 521 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRI 580

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D+E G    E +L+LD D+   YV +SNI+A AG + + E++R++   + + K  G+S
Sbjct: 581 HSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD ++H F+  D +HP  ++I+  L ++ +++KE+ G+V   ++ LHD+ EE K ++
Sbjct: 641 WIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQ-GYVPDTRFVLHDVDEEQKVQT 699

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L++      PG  IR+ KNLRVCGDCH   K +SK++    + RDA 
Sbjct: 700 LCSHSERLAITYGLMK----TPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAH 755

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  GVCSCGD+W
Sbjct: 756 RFHHFVDGVCSCGDFW 771



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 4/181 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++     +L  CS    L  G  +H  LV  G+S D+ L + L+ MYAKCG M+ A  VF
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVF 457

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           ++M ERNVV+WTA++ G  Q+G  +  L  F QM    +KP++ T ++ + A   +  VE
Sbjct: 458 NQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVE 517

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIA 187
            G + H   M   +   P+V +    +D+  + G + EA  +   MP +   + W A+++
Sbjct: 518 EGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576

Query: 188 G 188
            
Sbjct: 577 A 577



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 115/233 (49%), Gaps = 5/233 (2%)

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           ++  L EA+ +   +  +  +V   V   ++   A    +EQG+++HA   K     +  
Sbjct: 73  KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           + N+++ MY KCG + +A  +F+ +  +N+V+WT +I  +       EA   +  M L  
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDE 472
            +PD V ++++L+A ++  L++  Q+    +      ++PR+   + +V    + G + +
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISK 250

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD-GDNPVNYV 524
           A+ + + +P K ++  W  L++     G +++  E+ E + + +   N + Y 
Sbjct: 251 AQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYT 302


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/677 (39%), Positives = 419/677 (61%), Gaps = 8/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L+ G ++H A++K G   +  L N L+ MYAKCG +  A  VFD + +RN+
Sbjct: 54  LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNI 113

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++  F+           +  M  +  KP++ T  + + A      ++ G ++H  
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G E  P VG S++ MY+KCG I++A  +FD +P K+++TW  +IAGY   G  D  
Sbjct: 174 IVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVA 233

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L   MQ+    P++ TF S L+ C +  ++  G ++H ++I SG  Y  +  +  SL+
Sbjct: 234 LELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSG--YGRELWVVNSLI 291

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG L EAR++F  +  + V++W++++ GYAQ     EA+ LFR+++++ ++ D  
Sbjct: 292 TMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKM 351

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S++   +  A +++GK+IH         LD  + +++V MY KCG +D+A+ +FN+M
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQM 411

Query: 379 PVKNVVTWTVIITGY-GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
             +NVV WT IITG   +HG  +EA+  F +M    ++PD V + +VLSAC+H GLVEE 
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +++F  +  D  +KP +EHYSC VD LGRAG L+EA+N+I SMP  P  ++W  LLSACR
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           VH D+E G    E +L+LD D+   YV +S+I+A AG + + E++R++   + + K  G+
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 591

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+EVD ++H F+  D +HP +E+I+  L ++ +++K E+G+V   ++ LHD+ EE KE 
Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIK-EMGYVPDTRFVLHDVDEEQKER 650

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   L++      PG  IR+ KNLRVCGDCH   K +SK++    + RDA
Sbjct: 651 ILFSHSERLAITYGLMK----TPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDA 706

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F  GVCSCGD+W
Sbjct: 707 QRFHHFADGVCSCGDFW 723



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 142/263 (53%), Gaps = 6/263 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L+ C+    L++G ++H  +++ G+  +L + N LI MY KCG +  A  +F  + 
Sbjct: 252 FASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLP 311

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VV+WTA++ G+ Q G     ++LF +M    +KP++ T ++ + +    + ++ G +
Sbjct: 312 HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKR 371

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA-G 193
           IH   + +G+  +  + ++++ MY+KCG +++A+ +F+ M  ++++ W A+I G     G
Sbjct: 372 IHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHG 431

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L  F +M++ G  PD+ TFTS L AC  +G V  G +      +    Y +K ++
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK---HFRSMYLDYGIKPMV 488

Query: 254 A--GSLVDFYVKCGCLVEARRVF 274
                 VD   + G L EA  V 
Sbjct: 489 EHYSCFVDLLGRAGHLEEAENVI 511



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 108/216 (50%), Gaps = 4/216 (1%)

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           L EA+ +   +  +  +V   V   ++   A    +EQG+++HA   K     +  + N+
Sbjct: 28  LKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 87

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KCG + +A  +F+ +  +N+V+WT +I  +       EA   +  M L   +PD
Sbjct: 88  LLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
            V ++++L+A ++  L++  Q+    +      ++PR+   + +V    + G + +A+ +
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVI 205

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            + +P K ++  W  L++     G +++  E+ E +
Sbjct: 206 FDRLPEK-NVVTWTLLIAGYAQQGQVDVALELLETM 240


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/727 (38%), Positives = 406/727 (55%), Gaps = 48/727 (6%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR++F  +         L+ C+   +L+   ++H  +   G   D+ +   LI MY+KCG
Sbjct: 178 NRITFLSI---------LKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCG 228

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
           E++ AC +F KM ERNVVSWTA++    Q+        L+ +M  + + PN  T  + + 
Sbjct: 229 EISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLN 288

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           +     ++  G +IH    + G E + VV N++I MY KC  I +A   FD M  + +I+
Sbjct: 289 SCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVIS 348

Query: 182 WNAMIAGYVLAGYSDKGLL-----LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           W+AMIAGY  +GY DK  L     L  +M+  G  P++ TF S LKAC   G++  G QI
Sbjct: 349 WSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQI 408

Query: 237 HGFLITSGFP-------------------YSVKTVIA----------GSLVDFYVKCGCL 267
           H  +   GF                    Y  + V +           SL+  Y+KCG L
Sbjct: 409 HAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDL 468

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A +VF  +  ++V+SW+ +I GYAQ  ++A+  EL   ++    Q D   + S++   
Sbjct: 469 TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEAC 528

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              + +E+GK +HA A K+    DT V+ S++ MY KCG + EA  +F+++  ++ V W 
Sbjct: 529 GALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWN 588

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++ GYG+HG+  EAV LF++ML + V P+ + + AV+SAC  +GLV+E +E F  +  D
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED 648

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            RMKP  +HY C+VD LGRAGRL EA+  I+ MP +P I++W  LL AC+ H +++L   
Sbjct: 649 FRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEW 708

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
               +LRL+  N   YV +SNI+A AG W++  ++RK+   KGLKK  G S +E+D  IH
Sbjct: 709 AAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIH 768

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D  HP  + IH  L  + K MKE  G+   +++ LHD+ E  KE +L  HSEKLA
Sbjct: 769 TFVAEDCAHPEIDSIHAELEMLTKEMKEA-GYTPDMRFVLHDVDEVQKERALCHHSEKLA 827

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   L    L   PG  IR+ KNLRVCGDCH   K +SKI K   V RDA RFH F+ G 
Sbjct: 828 IAYGL----LKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGT 883

Query: 688 CSCGDYW 694
           CSCGD+W
Sbjct: 884 CSCGDFW 890



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 220/453 (48%), Gaps = 22/453 (4%)

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  K  + L   +    +  N  T    I+    L   E+G  +H    + G   +  +G
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           NS+I+ YSK G +    ++F  M  + ++TW++MIA Y    +  K    F +M++    
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P+  TF S LKAC +   +    +IH  +  SG    V   +A +L+  Y KCG +  A 
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDV--AVATALITMYSKCGEISLAC 234

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F  +++++V+SW+++I   AQ   L EA EL+ ++ +  +  +     S++       
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            + +G++IH++ ++     D  V+N+++ MY KC  I +A E F+ M  ++V++W+ +I 
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354

Query: 392 GYGKHGLA-----KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC- 445
           GY + G        E   L  +M  + V P+ V ++++L ACS  G +E+ ++  + +  
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414

Query: 446 ----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
               +D+ ++      + I +   + G + EA+ +   M  K  +A W +LL+     GD
Sbjct: 415 VGFESDRSLQ------TAIFNMYAKCGSIYEAEQVFSKMENKNVVA-WASLLTMYIKCGD 467

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           L    +V      +   N V++ +M   +A +G
Sbjct: 468 LTSAEKV---FSEMSTRNVVSWNLMIAGYAQSG 497



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           L EA++L   +++R L V+      ++   A     E GK +H    ++   +D  + NS
Sbjct: 59  LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +++ Y K G +    ++F  M +++VVTW+ +I  Y  +    +A   F +M   ++EP+
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + +L++L AC++  ++E+++E  + +     M+  +   + ++    + G +  A  + 
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHT-VVKASGMETDVAVATALITMYSKCGEISLACEIF 237

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD-GDNPVNYVMMSNIHADAGSW 536
           + M  + ++  W  ++ A   H  L    E+ E +L+     N V +V + N      + 
Sbjct: 238 QKMKER-NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296

Query: 537 NECERLRKLARSKGLK 552
           N   R+      +GL+
Sbjct: 297 NRGRRIHSHISERGLE 312


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/686 (39%), Positives = 415/686 (60%), Gaps = 13/686 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKC-GEMNGACAVFDK 72
            A + R CS    +  G  + G +VK G+   D+ +   LIDM+ K  G++  A  VF+K
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M ERN V+WT ++   +Q G A   + LF +M  S  +P+ FTLS  I A   +  +  G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGY 189
            Q+H   ++ G   +  VG  +I+MY+KC   G +  A ++FD +   ++ +W AMI GY
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350

Query: 190 VL-AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           V   GY ++ L LFR M     IP+ FTF+STLKAC +L ++  G Q+    +  GF  S
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGF--S 408

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +A SL+  Y + G + +AR+ FD++ +K++IS++++I  YA+  N  EA+ELF ++
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            ++ +    F  +S++   A    + +G+QIHA   K    L+ SV N+++ MY +CG I
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A ++F +M  +NV++WT IITG+ KHG A +A+ LF KML + V P+ V Y+AVLSAC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSAC 588

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLV E  ++F  +  +  + PR+EHY+C+VD LGR+G L EA   I SMP K    +
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALV 648

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W+T L ACRVHG+LELG+   ++++  +  +P  Y+++SN++A    W+E   +RK  + 
Sbjct: 649 WRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKE 708

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           K L K AG SWVEV+ ++H FY GD +HP   +I+  L  +  ++K +LG+V  + + LH
Sbjct: 709 KNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK-KLGYVPNLDFVLH 767

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EE KE+ L  HSEK+A+   L+    +    K IRVFKNLR+CGDCH  IK +S   
Sbjct: 768 DVEEEQKEKLLFQHSEKIAVAFGLI----STSKMKPIRVFKNLRICGDCHSAIKYISMAT 823

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
               +VRDA RFH  + G CSC +YW
Sbjct: 824 GREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 227/422 (53%), Gaps = 17/422 (4%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNGAC 67
           +R  L+  +  C+   LL  G QLH   ++ G + D  +   LI+MYAKC   G M  A 
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +FD++L+ NV SWTA++ G++Q G   +  L LF  M  + V PN FT S+ +KA   L
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++  G Q+    +K GF     V NS+I MY++ GRI++A + FD++  K+LI++N +I
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
             Y     S++ L LF ++++ G     FTF S L    S+G++G G QIH  +I SG  
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL- 508

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +   +  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+     +A+ELF 
Sbjct: 509 -KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           ++ E  ++ +     +++   +   LV +G + H  +     G+   + +   +VD+  +
Sbjct: 568 KMLEEGVRPNLVTYIAVLSACSHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACMVDILGR 626

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVA 420
            G + EA +  N MP K + + W   +     HG   L K A     KM+++    D  A
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA----KMIIEQEPHDPAA 682

Query: 421 YL 422
           Y+
Sbjct: 683 YI 684



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 261/529 (49%), Gaps = 14/529 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L+ C +    D G  +H  L +     D +  N LI +Y+KCG+   A ++F  M   R+
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           ++SW+A++  F  N      L  F  M  +   PNE+  +   +A      V  G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 138 MCMKSGFEWNPV-VGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             +K+G+  + V VG  +IDM+ K  G +  A ++F+ MP ++ +TW  MI   +  GY+
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + + LF +M   G  PD FT +  + AC ++  +  G Q+H   I  G   ++   +  
Sbjct: 253 GEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL--TLDRCVGC 310

Query: 256 SLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENL-AEAMELFRQLRER 311
            L++ Y KC   G +  AR++FD I   +V SW+++I GY Q+     EA++LFR +   
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  + F  SS +   A+ A +  G+Q+  +A K+       V+NS++ MY + G ID+A
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDA 430

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+ +  KN++++  +I  Y K+  ++EA+ LF ++    +      + ++LS  +  
Sbjct: 431 RKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASI 490

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G + + ++  +R+     +K      + ++    R G ++ A  + E M  +  I+ W +
Sbjct: 491 GTIGKGEQIHARVIKSG-LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTS 548

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNE 538
           +++    HG      E+   +L  +G  P  V Y+ + +  +  G  NE
Sbjct: 549 IITGFAKHGFATQALELFHKMLE-EGVRPNLVTYIAVLSACSHVGLVNE 596



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 217/417 (52%), Gaps = 17/417 (4%)

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + NG     +S    M      P+  T S  +K      S + G  +H    +S  + + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           V  NS+I +YSKCG+  +A  +F +M  ++ LI+W+AM++ +       + LL F  M E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC-GC 266
           +G  P+E+ F +  +AC +   V  G  I GF++ +G+  S   V  G L+D +VK  G 
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCG-LIDMFVKGRGD 220

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           LV A +VF+ + +++ ++W+ +I    Q     EA++LF ++     + D F LS ++  
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNV 383
            A+  L+  G+Q+H+ A +    LD  V   +++MY KC   G +  A ++F+++   NV
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340

Query: 384 VTWTVIITGY-GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            +WT +ITGY  K G  +EA+ LFR M+L  V P+   + + L AC++   +   ++ F+
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400

Query: 443 RLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
                  +K      +C+ +SL     R+GR+D+A+   + +  K  I+ + T++ A
Sbjct: 401 H-----AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLIS-YNTVIDA 451


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/686 (39%), Positives = 414/686 (60%), Gaps = 13/686 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKC-GEMNGACAVFDK 72
            A + R CS    +  G  + G ++K G+   D+ +   LIDM+ K  G++  A  VF+K
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M ERN V+WT ++   +Q G A   + LF  M  S  +P+ FTLS  I A   +  +  G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGY 189
            Q+H   ++ G   +  VG  +I+MY+KC   G +  A ++FD +   ++ +W AMI GY
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGY 350

Query: 190 VL-AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           V   GY ++ L LFR M     IP+ FTF+STLKAC +L ++  G Q+    +  GF  S
Sbjct: 351 VQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGF--S 408

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +A SL+  Y + G + +AR+ FD++ +K++IS++++I  YA+  N  EA+ELF ++
Sbjct: 409 SVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            ++ +    F  +S++   A    + +G+QIHA   K    L+ SV N+++ MY +CG I
Sbjct: 469 EDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI 528

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A ++F +M  +NV++WT IITG+ KHG A +A+ LF KML + V P+ V Y+AVLSAC
Sbjct: 529 ESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSAC 588

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLV E  ++F  +  +  + PR+EHY+CIVD LGR+G L EA   I SMP K    +
Sbjct: 589 SHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALV 648

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W+T L ACRVHG+LELG+   ++++  +  +P  Y+++SN++A    W+E   +RK  + 
Sbjct: 649 WRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKE 708

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           K L K AG SWVEV+ ++H FY GD +HP   +I+  L  +  ++K +LG+V  + + LH
Sbjct: 709 KXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK-KLGYVPNLDFVLH 767

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EE KE+ L  HSEK+A+   L+    +    K IRVFKNLR+CGDCH  IK +S   
Sbjct: 768 DVEEEQKEKLLFQHSEKIAVAFGLI----STSKMKPIRVFKNLRICGDCHSAIKYISMAT 823

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
               +VRDA RFH  + G CSC +YW
Sbjct: 824 GREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 227/422 (53%), Gaps = 17/422 (4%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNGAC 67
           +R  L+  +  C+   LL  G QLH   ++ G + D  +   LI+MYAKC   G M  A 
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +FD++L+ NV SWTA++ G++Q G   +  L LF  M  + V PN FT S+ +KA   L
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++  G Q+    +K GF     V NS+I MY++ GRI++A + FD++  K+LI++N +I
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
             Y     S++ L LF ++++ G     FTF S L    S+G++G G QIH  +I SG  
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL- 508

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +   +  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+     +A+ELF 
Sbjct: 509 -KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFH 567

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           ++ E  ++ +     +++   +   LV +G + H  +     G+   + +   IVD+  +
Sbjct: 568 KMLEEGVRPNEVTYIAVLSACSHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACIVDILGR 626

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVA 420
            G + EA +  N MP K + + W   +     HG   L K A     KM+++    D  A
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA----KMIIEQEPHDPAA 682

Query: 421 YL 422
           Y+
Sbjct: 683 YI 684



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 262/531 (49%), Gaps = 18/531 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L+ C +    D G  +H  L +     D +  N LI +Y+KCG+   A ++F  M   R+
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           ++SW+A++  F  N      L  F  M  +   PNE+  +   +A      V  G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 138 MCMKSGFEWNPV-VGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             +K+G+  + V VG  +IDM+ K  G +  A ++F+ MP ++ +TW  MI   +  GY+
Sbjct: 193 FVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + + LF  M   G  PD FT +  + AC ++  +  G Q+H   I  G   ++   +  
Sbjct: 253 GEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL--TLDRCVGC 310

Query: 256 SLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENL-AEAMELFRQLRER 311
            L++ Y KC   G +  AR++FD I   +V SW+++I GY Q+     EA++LFR +   
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  + F  SS +   A+ A +  G+Q+  +A K+       V+NS++ MY + G ID+A
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDA 430

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+ +  KN++++  +I  Y K+  ++EA+ LF ++    +      + ++LS  +  
Sbjct: 431 RKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASI 490

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G + + ++  +R+     +K      + ++    R G ++ A  + E M  +  I+ W +
Sbjct: 491 GTIGKGEQIHARVIKSG-LKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTS 548

Query: 492 LLSACRVHG----DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           +++    HG     LEL  ++ E  +R    N V Y+ + +  +  G  NE
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVR---PNEVTYIAVLSACSHVGLVNE 596



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 216/417 (51%), Gaps = 17/417 (4%)

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + NG     +S    M      P+  T S  +K      S + G  +H    +S  + + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           V  NS+I +YSKCG+  +A  +F +M  ++ LI+W+AM++ +       + LL F  M E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC-GC 266
           +G  P+E+ F +  +AC +   V  G  I GF+I +G+  S   V  G L+D +VK  G 
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCG-LIDMFVKGRGD 220

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           LV A +VF+ + +++ ++W+ +I    Q     EA++LF  +     + D F LS ++  
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNV 383
            A+  L+  G+Q+H+ A +    LD  V   +++MY KC   G +  A ++F+++   NV
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340

Query: 384 VTWTVIITGY-GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            +WT +ITGY  K G  +EA+ LFR M+L  V P+   + + L AC++   +   ++ F+
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400

Query: 443 RLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
                  +K      +C+ +SL     R+GR+D+A+   + +  K  I+ + T++ A
Sbjct: 401 H-----AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLIS-YNTVIDA 451


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 265/682 (38%), Positives = 414/682 (60%), Gaps = 13/682 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAK-CGEMNGACAVFDKMLER 76
            R CS    +  G  + G L+K G F  D+ +   LIDM+ K  G++  A  VFD+M +R
Sbjct: 49  FRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR 108

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVV+WT ++  F Q G ++  + LF  M  S   P+ FTLS  + A   +  +  G Q H
Sbjct: 109 NVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFH 168

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            + MKSG + +  VG S++DMY+KC   G +++A ++FD MP  ++++W A+I GYV +G
Sbjct: 169 CLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG 228

Query: 194 YSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             D+  + LF +M +    P+ FTF+S LKAC +L  +  G Q++  ++      +    
Sbjct: 229 GCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVK--MRLASINC 286

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL+  Y +CG +  AR+ FD++ +K+++S+++++  YA+  N  EA ELF ++    
Sbjct: 287 VGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG 346

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
             V+ F  +S++   +    + +G+QIH+   K     +  + N+++ MY +CG I+ A 
Sbjct: 347 TGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAF 406

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           ++FNEM   NV++WT +ITG+ KHG A  A+  F KML   V P+ V Y+AVLSACSH G
Sbjct: 407 QVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVG 466

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           L+ E  ++F  +  +  + PR+EHY+C+VD LGR+G L+EA  L+ SMP K    + +T 
Sbjct: 467 LISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTF 526

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           L ACRVHG+++LG+   E++L  D  +P  Y+++SN+HA AG W E   +RK  + + L 
Sbjct: 527 LGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLT 586

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           K AG SW+EV+ ++H FY GD +HP  ++I+  L ++  ++K ELG++    + LHD++E
Sbjct: 587 KEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIK-ELGYIPSTDFVLHDVEE 645

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
           E KE+ L  HSEK+A+      G ++    + IRVFKNLRVCGDCH   K  S + +   
Sbjct: 646 EQKEQYLFQHSEKIAVAY----GFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEI 701

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
           V+RDA RFH F+ G CSC DYW
Sbjct: 702 VLRDANRFHHFKDGTCSCNDYW 723



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/455 (31%), Positives = 242/455 (53%), Gaps = 23/455 (5%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNG 65
           V +R  L+  +  C++  LL  G Q H  ++K G   D+ +   L+DMYAKC   G ++ 
Sbjct: 142 VPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDD 201

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           A  VFD+M   NV+SWTA++ G++Q+G   +  + LF +M    VKPN FT S+ +KA  
Sbjct: 202 ARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACA 261

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS +  G Q++ + +K        VGNS+I MYS+CG +  A + FDV+  K+L+++N 
Sbjct: 262 NLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNT 321

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++  Y  +  S++   LF +++  G   + FTF S L    S+G++G G QIH  ++ SG
Sbjct: 322 IVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSG 381

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F  ++   I  +L+  Y +CG +  A +VF+ +   +VISW+S+I G+A+      A+E 
Sbjct: 382 FKSNLH--ICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALET 439

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++ E  +  +     +++   +   L+ +G + H  + KV  G+   + +   +VD+ 
Sbjct: 440 FHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMKVEHGIVPRMEHYACVVDLL 498

Query: 363 LKCGLIDEATELFNEMPVKN----VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
            + G ++EA EL N MP K     + T+      +G   L K A     +M+L+    D 
Sbjct: 499 GRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAA----EMILEQDPHDP 554

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            AY+ + +  + +G  EE  E        K+MK R
Sbjct: 555 AAYILLSNLHASAGQWEEVAEI------RKKMKER 583



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 222/432 (51%), Gaps = 10/432 (2%)

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R++VSW+AL+  +  N  A   +S F  M      PNE+  +   +A     ++  G  
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 135 IHGMCMKSG-FEWNPVVGNSIIDMYSK-CGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           I G  +K+G FE +  VG ++IDM+ K  G +  A ++FD MP ++++TW  MI  +   
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G+S   + LF  M   G +PD FT +  + AC  +G +  G Q H  ++ SG    V   
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV--C 181

Query: 253 IAGSLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENL-AEAMELFRQL 308
           +  SLVD Y KC   G + +AR+VFD +   +V+SW+++I GY Q      EA+ELF ++
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  ++ + F  SS++   A+ + +  G+Q++A   K+       V NS++ MY +CG +
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A + F+ +  KN+V++  I+  Y K   ++EA  LF ++       +   + ++LS  
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S  G + + ++  SR+      K  +   + ++    R G ++ A  +   M     I+ 
Sbjct: 362 SSIGAIGKGEQIHSRILKSG-FKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVIS- 419

Query: 489 WQTLLSACRVHG 500
           W ++++    HG
Sbjct: 420 WTSMITGFAKHG 431


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/727 (37%), Positives = 406/727 (55%), Gaps = 48/727 (6%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR++F  +         L+ C+   +L+ G ++H  +  MG   D+ +   LI MY+KCG
Sbjct: 156 NRITFLSI---------LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCG 206

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
           E++ AC VF KM ERNVVSWTA++    Q+        L+ QM  + + PN  T  + + 
Sbjct: 207 EISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLN 266

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           +     ++  G +IH    + G E + +V N++I MY KC  + EA  +FD M  + +I+
Sbjct: 267 SCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS 326

Query: 182 WNAMIAGYVLAGYSDKGLL-----LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           W+AMIAGY  +GY DK  +     L  +M+  G  P++ TF S L+AC + G++  G QI
Sbjct: 327 WSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI 386

Query: 237 HGFLITSGF----------------------------PYSVKTVIA-GSLVDFYVKCGCL 267
           H  L   GF                              + K V+A  S +  Y+KCG L
Sbjct: 387 HAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDL 446

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A +VF  +  ++V+SW+ +I GYAQ  ++ +  EL   ++    Q D   + +++   
Sbjct: 447 SSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEAC 506

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              A +E+GK +HA A K+    DT V+ S++ MY KCG + EA  +F++M  ++ V W 
Sbjct: 507 GALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWN 566

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++ GYG+HG   EAV LF++ML + V P+ +   AV+SACS +GLV+E +E F  +  D
Sbjct: 567 AMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED 626

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            +M PR +HY C+VD LGRAGRL EA+  I+SMP +P I++W  LL AC+ H +++L   
Sbjct: 627 FKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAER 686

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
               +L L+      Y+ +SNI+A AG W++  ++R++   +GLKK  G S +E+D  IH
Sbjct: 687 AAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIH 746

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D  HP  + IH  L  + K MKE  G+   +++ LHD+ +  KE++L  HSEKLA
Sbjct: 747 TFVAEDCAHPEIDAIHAELETLTKEMKEA-GYTPDMRFVLHDVDDVQKEKALCHHSEKLA 805

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   L    L    G  IR+ KNLRVCGDCH   K +SKI K   V RDA RFH F  G 
Sbjct: 806 IAYGL----LKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGT 861

Query: 688 CSCGDYW 694
           CSCGD+W
Sbjct: 862 CSCGDFW 868



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 259/520 (49%), Gaps = 48/520 (9%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K    + G  +H  L ++G   D+ L N LI+ Y+K  ++  A  VF +M  R+VV+W
Sbjct: 66  CAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTW 125

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ++++  +  N +       F +M  ++++PN  T  + +KA    S +E G +IH +   
Sbjct: 126 SSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKA 185

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G E +  V  ++I MYSKCG I+ A  +F  M  +++++W A+I         ++   L
Sbjct: 186 MGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFEL 245

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           + +M + G  P+  TF S L +C +  ++  G +IH  +   G    +  ++A +L+  Y
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDM--IVANALITMY 303

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ-----EENLAEAMELFRQLRERSLQVD 316
            KC  + EAR +FD + ++ VISWS++I GYAQ     +E++ E  +L  ++R   +  +
Sbjct: 304 CKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPN 363

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE--- 373
                S++        +EQG+QIHA  +KV   LD S+  +I +MY KCG I EA +   
Sbjct: 364 KVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFS 423

Query: 374 ----------------------------LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                                       +F+EMP +NVV+W ++I GY ++G   +   L
Sbjct: 424 KMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFEL 483

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL- 464
              M  +  +PD V  + +L AC     +E       +L + + +K  +E  + +  SL 
Sbjct: 484 LSSMKAEGFQPDRVTVITILEACGALAGLER-----GKLVHAEAVKLGLESDTVVATSLI 538

Query: 465 ---GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
               + G++ EA+ + + M  + ++A W  +L+    HGD
Sbjct: 539 GMYSKCGQVAEARTVFDKMSNRDTVA-WNAMLAGYGQHGD 577



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 120/256 (46%), Gaps = 3/256 (1%)

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           L EA++L   +++R L V+      ++   A     E GK +H    ++   +D  + NS
Sbjct: 37  LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +++ Y K   +  A ++F  M +++VVTW+ +I  Y  +    +A   F +M   ++EP+
Sbjct: 97  LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + +L++L AC++  ++E+ ++  + +     M+  +   + ++    + G +  A  + 
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHT-IVKAMGMETDVAVATALITMYSKCGEISVACEVF 215

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD-GDNPVNYVMMSNIHADAGSW 536
             M  + ++  W  ++ A   H  L    E+ E +L+     N V +V + N      + 
Sbjct: 216 HKM-TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274

Query: 537 NECERLRKLARSKGLK 552
           N   R+      +GL+
Sbjct: 275 NRGRRIHSHISERGLE 290


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/664 (40%), Positives = 394/664 (59%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLH  ++KMG S DL++   L+D+Y KC ++  A   F      NVV W  ++  + Q
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            GN      +F QM    + PN++T  + ++    L +++ G QIH   +KSGF++N  V
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            + +IDMY+K G ++ A  +   +  + +++W AMIAGY       + L LF++M+  G 
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D   F+S + AC  + ++  G QIH     SG  YS    I  +LV  Y +CG   +A
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISG--YSEDLSIGNALVSLYARCGRAQDA 570

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
              F+ I+ K  ISW++LI G+AQ  +  EA+++F Q+ +  ++ + F   S +   A+ 
Sbjct: 571 YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANT 630

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A ++QGKQIHA   K     +T  SN ++ +Y KCG I++A   F EMP KNVV+W  +I
Sbjct: 631 ANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMI 690

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           TGY +HG   EAV LF +M    + P+ V ++ VLSACSH GLV E   YF  +  +  +
Sbjct: 691 TGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGL 750

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P+ EHY C+VD LGRA  L  A+  IE MP++P   IW+TLLSAC VH ++E+G     
Sbjct: 751 VPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAAR 810

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            LL L+ ++   YV++SN++A +G W+  +R R++ + +G+KK  GRSW+EV   IH F+
Sbjct: 811 HLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFF 870

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD  HPL E+I++ + ++ +R   E+G+V      L+D+++E K+ +  +HSEKLA+  
Sbjct: 871 VGDRLHPLAEQIYEYIDDLNERAG-EIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAF 929

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    N  P   IRV KNLRVC DCH +IK +SKI     VVRDA RFH FEGGVCSC
Sbjct: 930 GLL-SLTNTMP---IRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSC 985

Query: 691 GDYW 694
            DYW
Sbjct: 986 KDYW 989



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/511 (29%), Positives = 257/511 (50%), Gaps = 15/511 (2%)

Query: 4   VSFSLVSERQRLADSLRCCSK-NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           ++ ++  +    A  LR CS          Q+H  ++  GF    ++ N LID+Y+K G 
Sbjct: 103 ITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGH 162

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           ++ A  VF+++  ++ VSW A++ G  QNG     + LFCQM  S+V P  +  S+ + A
Sbjct: 163 VDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSA 222

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              +   + G Q+HG  +K G      V N+++ +YS+ G +  A ++F  M  +  I++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I+G    G+SD+ L LF KMQ     PD  T  S L AC S+G+   G Q+H ++I 
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIK 342

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G   S   +I GSL+D YVKC  +  A   F   E ++V+ W+ +++ Y Q  NL+E+ 
Sbjct: 343 MGM--SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESY 400

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            +F Q++   L  + +   S++        ++ G+QIH    K     +  V + ++DMY
Sbjct: 401 WIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMY 460

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            K G +D A  +   +  ++VV+WT +I GY +H L  EA+ LF++M    +  D + + 
Sbjct: 461 AKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFS 520

Query: 423 AVLSACS-----HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
           + +SAC+     + G    +Q Y S    D  +       + +V    R GR  +A    
Sbjct: 521 SAISACAGIQALNQGQQIHAQSYISGYSEDLSIG------NALVSLYARCGRAQDAYLAF 574

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           E +  K +I+ W  L+S     G  E   +V
Sbjct: 575 EKIDAKDNIS-WNALISGFAQSGHCEEALQV 604



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 254/480 (52%), Gaps = 6/480 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C +   LLD   +LH  + K GF  + +L + LID+Y   GE++ A  +FD +   NV  
Sbjct: 20  CFNSGSLLD-AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF 78

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMC 139
           W  ++ G L    A   L LF  M + +V P+E T ++ ++A SG  +  +   QIH   
Sbjct: 79  WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +  GF  +P+V N +ID+YSK G ++ A  +F+ +  K  ++W AMI+G    G  D+ +
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           LLF +M +   IP  + F+S L AC  +     G Q+HGF++  G   S +T +  +LV 
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL--SSETFVCNALVT 256

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y + G L+ A ++F  + ++  IS++SLI G AQ      A++LF +++   ++ D   
Sbjct: 257 LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVT 316

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           ++S++   A      +GKQ+H+Y  K+    D  +  S++D+Y+KC  I+ A E F    
Sbjct: 317 VASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE 376

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            +NVV W V++  YG+ G   E+  +F +M ++ + P+   Y ++L  C+  G ++  ++
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +++      +  +   S ++D   + G LD A+ +++ +  +  +  W  +++    H
Sbjct: 437 IHTQVIKSG-FQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 223/411 (54%), Gaps = 8/411 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C+    LD G Q+H  ++K GF F++ + + LIDMYAK GE++ A  +  ++ E +V
Sbjct: 422 LRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDV 481

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G+ Q+      L LF +M +  ++ +    S+ I A   + ++  G QIH  
Sbjct: 482 VSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              SG+  +  +GN+++ +Y++CGR  +A   F+ + AK  I+WNA+I+G+  +G+ ++ 
Sbjct: 542 SYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEA 601

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F +M + G   + FTF S + A  +  ++  G QIH  +I +G  Y  +T  +  L+
Sbjct: 602 LQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTG--YDSETEASNVLI 659

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG + +A+R F  + +K+V+SW+++I GY+Q    +EA+ LF ++++  L  +  
Sbjct: 660 TLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHV 719

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   +   LV +G       +K   GL     +   +VD+  +  L+  A E   
Sbjct: 720 TFVGVLSACSHVGLVNEGLSYFRSMSK-EHGLVPKPEHYVCVVDLLGRAALLCCAREFIE 778

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           EMP++ + + W  +++    H      +G F    L ++EP+  A   +LS
Sbjct: 779 EMPIEPDAMIWRTLLSACTVH--KNIEIGEFAARHLLELEPEDSATYVLLS 827



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 127/219 (57%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            + ++  C+    L+ G Q+H      G+S DL + N L+ +YA+CG    A   F+K+ 
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID 578

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ +SW AL+ GF Q+G+ +  L +F QM  + V+ N FT  + + A+   ++++ G Q
Sbjct: 579 AKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ 638

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH M +K+G++      N +I +YSKCG I +A R F  MP K++++WNAMI GY   GY
Sbjct: 639 IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGY 698

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
             + + LF +M++ G +P+  TF   L AC  +G V  G
Sbjct: 699 GSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEG 737



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 44/349 (12%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M+E G   +  T+    + C + GS+    ++H  +  SGF    + V+   L+D Y+  
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGF--DGEDVLGSRLIDIYLAH 58

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G +  A ++FD I   +V  W+ +I G   ++  ++ + LF  +   ++  D    +S++
Sbjct: 59  GEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118

Query: 325 ----GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
               G  A F + E   QIHA       G    V N ++D+Y K G +D A  +F  + +
Sbjct: 119 RACSGGKAPFQVTE---QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFL 175

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS----------- 429
           K+ V+W  +I+G  ++G   EA+ LF +M    V P    + +VLSAC+           
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL 235

Query: 430 HSGLVEESQEYFSRLCN--------------------DKRMKPRIEHYSCIVDSLGRAGR 469
           H  +V+      + +CN                        + RI  Y+ ++  L + G 
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS-YNSLISGLAQRGF 294

Query: 470 LDEAKNLIESMPV---KPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            D A  L E M +   KP      +LLSAC   G    G+++   ++++
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 265/686 (38%), Positives = 418/686 (60%), Gaps = 13/686 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAK-CGEMNGACAVFDK 72
            A  +R CS       G  ++G +VK G+   D+ +  +LIDM+ K  G++  A  VFDK
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M ERN+V+WT ++  F Q G A+  + LF  M  S   P+ FT S+ + A   L  +  G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGY 189
            Q+H   ++ G   +  VG S++DMY+KC   G ++++ ++F+ MP  ++++W A+I  Y
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310

Query: 190 VLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           V +G  DK  + LF KM      P+ F+F+S LKACG+L     G Q++ + +  G   S
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-S 369

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           V  V   SL+  Y + G + +AR+ FD++ +K+++S+++++ GYA+     EA  LF ++
Sbjct: 370 VNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 428

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  + +  F  +S++   A    + +G+QIH    K     +  + N+++ MY +CG I
Sbjct: 429 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 488

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A ++FNEM  +NV++WT +ITG+ KHG A  A+ +F KML    +P+ + Y+AVLSAC
Sbjct: 489 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 548

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH G++ E Q++F+ +  +  + PR+EHY+C+VD LGR+G L EA   I SMP+     +
Sbjct: 549 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 608

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W+TLL ACRVHG+ ELGR   E++L  + D+P  Y+++SN+HA AG W +  ++RK  + 
Sbjct: 609 WRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKE 668

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           + L K AG SW+EV+  +H F+ G+ +HP   +I+Q L ++  ++K E+G++    + LH
Sbjct: 669 RNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK-EMGYIPDTDFVLH 727

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           DI+EE KE+ L  HSEK+A+   L+    +    K IR+FKNLRVCGDCH  IK +S   
Sbjct: 728 DIEEEQKEQFLFQHSEKIAVAFGLI----STSQSKPIRIFKNLRVCGDCHTAIKYISMAT 783

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
               VVRD+ RFH  + GVCSC DYW
Sbjct: 784 GREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 235/425 (55%), Gaps = 12/425 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNG 65
           V +R   +  L  C++  LL  G QLH  ++++G + D+ +   L+DMYAKC   G ++ 
Sbjct: 228 VPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDD 287

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           +  VF++M E NV+SWTA++  ++Q+G   K  + LFC+M S  ++PN F+ S+ +KA G
Sbjct: 288 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 347

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS    G Q++   +K G      VGNS+I MY++ GR+ +A + FD++  K+L+++NA
Sbjct: 348 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 407

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GY     S++  LLF ++ + G     FTF S L    S+G++G G QIHG L+  G
Sbjct: 408 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 467

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             Y     I  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+      A+E+
Sbjct: 468 --YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 525

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++ E   + +     +++   +   ++ +G Q H  +     G+   + +   +VD+ 
Sbjct: 526 FHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLL 584

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            + GL+ EA E  N MP+  + + W  ++     HG     +G     ++ + EPD  A 
Sbjct: 585 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAEMILEQEPDDPAA 642

Query: 422 LAVLS 426
             +LS
Sbjct: 643 YILLS 647



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 256/493 (51%), Gaps = 19/493 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L+ C +      G  +H  L++ G   D ++ N LI +Y+KCG+   A  +F+ M  +R+
Sbjct: 33  LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRD 92

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW+A++  F  N      +  F  M      PNE+  +  I+A    +    G  I+G
Sbjct: 93  LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 152

Query: 138 MCMKSGF-EWNPVVGNSIIDMYSK-CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             +K+G+ E +  VG  +IDM+ K  G +  A ++FD MP ++L+TW  MI  +   G +
Sbjct: 153 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 212

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              + LF  M+  G +PD FT++S L AC  LG +  G Q+H  +I  G    V   +  
Sbjct: 213 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV--CVGC 270

Query: 256 SLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQE-ENLAEAMELFRQLRER 311
           SLVD Y KC   G + ++R+VF+ + + +V+SW+++I  Y Q  E   EA+ELF ++   
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ + F  SS++    + +    G+Q+++YA K+       V NS++ MY + G +++A
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+ +  KN+V++  I+ GY K+  ++EA  LF ++    +      + ++LS  +  
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIA 487
           G + + ++   RL     +K   +   CI ++L     R G ++ A  +   M  +  I+
Sbjct: 451 GAMGKGEQIHGRL-----LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 488 IWQTLLSACRVHG 500
            W ++++    HG
Sbjct: 506 -WTSMITGFAKHG 517



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 201/381 (52%), Gaps = 16/381 (4%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M   +  P+  T S  +K+     + + G  +H   M+SG E + VV N++I +YSKCG 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 164 INEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
              A  +F+ M  K  L++W+AM++ +       + +  F  M E G  P+E+ F + ++
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK-CGCLVEARRVFDLIEQKS 281
           AC +      G  I+GF++ +G+       +   L+D +VK  G L  A +VFD + +++
Sbjct: 137 ACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +++W+ +I  +AQ     +A++LF  +       D F  SS++    +  L+  GKQ+H+
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNVVTWTVIITGYGKHG- 397
              ++   LD  V  S+VDMY KC   G +D++ ++F +MP  NV++WT IIT Y + G 
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 315

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             KEA+ LF KM+   + P+  ++ +VL AC +      S  Y         +K  I   
Sbjct: 316 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASV 370

Query: 458 SCIVDSL----GRAGRLDEAK 474
           +C+ +SL     R+GR+++A+
Sbjct: 371 NCVGNSLISMYARSGRMEDAR 391


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 265/686 (38%), Positives = 418/686 (60%), Gaps = 13/686 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAK-CGEMNGACAVFDK 72
            A  +R CS       G  ++G +VK G+   D+ +  +LIDM+ K  G++  A  VFDK
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M ERN+V+WT ++  F Q G A+  + LF  M  S   P+ FT S+ + A   L  +  G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGY 189
            Q+H   ++ G   +  VG S++DMY+KC   G ++++ ++F+ MP  ++++W A+I  Y
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328

Query: 190 VLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           V +G  DK  + LF KM      P+ F+F+S LKACG+L     G Q++ + +  G   S
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-S 387

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           V  V   SL+  Y + G + +AR+ FD++ +K+++S+++++ GYA+     EA  LF ++
Sbjct: 388 VNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 446

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  + +  F  +S++   A    + +G+QIH    K     +  + N+++ MY +CG I
Sbjct: 447 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 506

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A ++FNEM  +NV++WT +ITG+ KHG A  A+ +F KML    +P+ + Y+AVLSAC
Sbjct: 507 EAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC 566

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH G++ E Q++F+ +  +  + PR+EHY+C+VD LGR+G L EA   I SMP+     +
Sbjct: 567 SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALV 626

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W+TLL ACRVHG+ ELGR   E++L  + D+P  Y+++SN+HA AG W +  ++RK  + 
Sbjct: 627 WRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKE 686

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           + L K AG SW+EV+  +H F+ G+ +HP   +I+Q L ++  ++K E+G++    + LH
Sbjct: 687 RNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK-EMGYIPDTDFVLH 745

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           DI+EE KE+ L  HSEK+A+   L+    +    K IR+FKNLRVCGDCH  IK +S   
Sbjct: 746 DIEEEQKEQFLFQHSEKIAVAFGLI----STSQSKPIRIFKNLRVCGDCHTAIKYISMAT 801

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
               VVRD+ RFH  + GVCSC DYW
Sbjct: 802 GREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 235/425 (55%), Gaps = 12/425 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNG 65
           V +R   +  L  C++  LL  G QLH  ++++G + D+ +   L+DMYAKC   G ++ 
Sbjct: 246 VPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDD 305

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           +  VF++M E NV+SWTA++  ++Q+G   K  + LFC+M S  ++PN F+ S+ +KA G
Sbjct: 306 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 365

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS    G Q++   +K G      VGNS+I MY++ GR+ +A + FD++  K+L+++NA
Sbjct: 366 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 425

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GY     S++  LLF ++ + G     FTF S L    S+G++G G QIHG L+  G
Sbjct: 426 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 485

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             Y     I  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+      A+E+
Sbjct: 486 --YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 543

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++ E   + +     +++   +   ++ +G Q H  +     G+   + +   +VD+ 
Sbjct: 544 FHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLL 602

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            + GL+ EA E  N MP+  + + W  ++     HG     +G     ++ + EPD  A 
Sbjct: 603 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAEMILEQEPDDPAA 660

Query: 422 LAVLS 426
             +LS
Sbjct: 661 YILLS 665



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 256/493 (51%), Gaps = 19/493 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L+ C +      G  +H  L++ G   D ++ N LI +Y+KCG+   A  +F+ M  +R+
Sbjct: 51  LKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRD 110

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW+A++  F  N      +  F  M      PNE+  +  I+A    +    G  I+G
Sbjct: 111 LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 170

Query: 138 MCMKSGF-EWNPVVGNSIIDMYSK-CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             +K+G+ E +  VG  +IDM+ K  G +  A ++FD MP ++L+TW  MI  +   G +
Sbjct: 171 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 230

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              + LF  M+  G +PD FT++S L AC  LG +  G Q+H  +I  G    V   +  
Sbjct: 231 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV--CVGC 288

Query: 256 SLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQE-ENLAEAMELFRQLRER 311
           SLVD Y KC   G + ++R+VF+ + + +V+SW+++I  Y Q  E   EA+ELF ++   
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ + F  SS++    + +    G+Q+++YA K+       V NS++ MY + G +++A
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+ +  KN+V++  I+ GY K+  ++EA  LF ++    +      + ++LS  +  
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIA 487
           G + + ++   RL     +K   +   CI ++L     R G ++ A  +   M  +  I+
Sbjct: 469 GAMGKGEQIHGRL-----LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 488 IWQTLLSACRVHG 500
            W ++++    HG
Sbjct: 524 -WTSMITGFAKHG 535



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 201/381 (52%), Gaps = 16/381 (4%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M   +  P+  T S  +K+     + + G  +H   M+SG E + VV N++I +YSKCG 
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 164 INEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
              A  +F+ M  K  L++W+AM++ +       + +  F  M E G  P+E+ F + ++
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 154

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK-CGCLVEARRVFDLIEQKS 281
           AC +      G  I+GF++ +G+       +   L+D +VK  G L  A +VFD + +++
Sbjct: 155 ACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +++W+ +I  +AQ     +A++LF  +       D F  SS++    +  L+  GKQ+H+
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNVVTWTVIITGYGKHG- 397
              ++   LD  V  S+VDMY KC   G +D++ ++F +MP  NV++WT IIT Y + G 
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 333

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             KEA+ LF KM+   + P+  ++ +VL AC +      S  Y         +K  I   
Sbjct: 334 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL-----SDPYTGEQVYSYAVKLGIASV 388

Query: 458 SCIVDSL----GRAGRLDEAK 474
           +C+ +SL     R+GR+++A+
Sbjct: 389 NCVGNSLISMYARSGRMEDAR 409


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/680 (37%), Positives = 404/680 (59%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    L+ G QLH  L+K G S D ++   L+D+Y KCG +  A  +F    
Sbjct: 247 IASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD 306

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             NVV W  ++  + Q  +      LFCQM ++ V+PNEFT    ++       +  G Q
Sbjct: 307 RTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQ 366

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+GFE +  V   +IDMYSK G +++A R+ +V+ AK +++W +MIAGYV   +
Sbjct: 367 IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEF 426

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L  F+ MQ  G  PD     S + AC  + ++  G QIH  +  SG  YS    I 
Sbjct: 427 CKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG--YSADVSIW 484

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV+ Y +CG   EA  +F+ IE K  I+W+ ++ G+AQ     EA+E+F ++ +  ++
Sbjct: 485 NALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVK 544

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F   S +   A+ A ++QGKQIHA   K     +T V+N+++ +Y KCG I++A   
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQ 604

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EM  +N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLV
Sbjct: 605 FFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE   YF  + ++  + PR +HY+C+VD LGRAG+LD A+  +E MPV  +  +W+TLLS
Sbjct: 665 EEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVH ++E+G    + LL L+  +  +YV++SN +A  G W   + +RK+ + +G++K 
Sbjct: 725 ACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKE 784

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSW+EV   +H F+ GD  HPL  +I++ L +++ R+  ++G++ G  +  H+ ++E 
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLA-KIGYIQGNYFLFHEKEKEQ 843

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ +  VHSEKLA+   L    ++  P   +RV KNLRVC DCH ++K  S+++    V+
Sbjct: 844 KDPTAFVHSEKLAVAFGL----MSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVL 899

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F  G CSCGD+W
Sbjct: 900 RDVYRFHHFNNGNCSCGDFW 919



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/475 (31%), Positives = 248/475 (52%), Gaps = 4/475 (0%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H   +  G   D +  N LID+YAK G +  A  VF+++  R+ VSW A++ G+ +NG 
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  + L+ QM  S V P  + LS+ + A    +  E G  +H    K G     VVGN+
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +I +Y + G ++ A R+F  MP    +T+N +I+ +   G  +  L +F +M+  G  PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  S L AC S+G +  G Q+H +L+ +G   S   +I GSL+D YVKCG +VEA  +
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGM--SPDYIIEGSLLDLYVKCGVIVEALEI 301

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F   ++ +V+ W+ +++ Y Q  +LA++ +LF Q+    ++ + F    ++        +
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
             G+QIH  + K     D  VS  ++DMY K G +D+A  +   +  K+VV+WT +I GY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            +H   KEA+  F+ M L  + PD +   + +SAC+    + + Q+  SR+         
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG-YSAD 480

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           +  ++ +V+   R GR  EA +L E++  K  I  W  ++S     G  E   EV
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAIEHKDKIT-WNGMVSGFAQSGLYEEALEV 534



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 254/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L + G  +H  + K G   + ++ N LI +Y + G ++ A  VF +M 
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V++  L+    Q GN ++ L +F +M  S   P+  T+++ + A   +  +  G Q
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G   + ++  S++D+Y KCG I EA  +F      +++ WN M+  Y     
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   LF +M   G  P+EFT+   L+ C   G +  G QIH   I +GF   +   ++
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +ARR+ +++E K V+SW+S+I GY Q E   EA+E F+ ++   + 
Sbjct: 384 GVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    + QG+QIH+         D S+ N++V++Y +CG   EA  L
Sbjct: 444 PDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSL 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +  K+ +TW  +++G+ + GL +EA+ +F KM    V+ +   +++ +SA ++   +
Sbjct: 504 FEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  + +          E  + ++   G+ G +++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHATVIKTG-CTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVS-WNTIIT 621

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 622 SCSQHG 627



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 124/228 (54%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F +  +   LA ++  C+    +  G Q+H  +   G+S D+ + N L+++YA+CG    
Sbjct: 440 FGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKE 499

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A ++F+ +  ++ ++W  ++ GF Q+G  +  L +F +M  + VK N FT  ++I AS  
Sbjct: 500 AFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASAN 559

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L+ ++ G QIH   +K+G      V N++I +Y KCG I +A   F  M  ++ ++WN +
Sbjct: 560 LADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTI 619

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           I      G+  + L LF +M++ G  P++ TF   L AC  +G V  G
Sbjct: 620 ITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 667


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/687 (37%), Positives = 408/687 (59%), Gaps = 7/687 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V+     A +L+ C  +  +  G+Q+H A++K G   D+ + N L+ MY + G+M  A 
Sbjct: 156 VVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAA 215

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F  +  +++V+W +++ GF+QNG     L  F  + ++ +KP++ ++ + I ASG L 
Sbjct: 216 VIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG 275

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            + NG +IH   +K+GF+ N +VGN++IDMY+KC  ++   R FD+M  K LI+W    A
Sbjct: 276 YLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAA 335

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY       + L L R++Q  G   D     S L AC  L  +G   +IHG+ I  G   
Sbjct: 336 GYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS- 394

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
               V+  +++D Y +CG +  A R+F+ IE K V+SW+S+I  Y       +A+E+F  
Sbjct: 395 --DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSS 452

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           ++E  L+ D   L S++      + +++GK+IH +  +    L+ S+SN++VDMY +CG 
Sbjct: 453 MKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGS 512

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +++A ++F     +N++ WT +I+ YG HG  + AV LF +M  + + PD + +LA+L A
Sbjct: 513 VEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYA 572

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSHSGLV E + +   +  + +++P  EHY+C+VD LGR   L+EA  +++SM  +P+  
Sbjct: 573 CSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPE 632

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL ACR+H + E+G    E LL LD DNP NYV++SN+ A  G W + E +R   +
Sbjct: 633 VWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMK 692

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
             GL K  G SW+EV  +IH F   D  HP  +KI+Q L ++ +++K E G+V   K+ L
Sbjct: 693 GSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVL 752

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           H++ EE K + L  HSE+LAI   L    L    G  IRV KNLRVCGDCH F   +S+ 
Sbjct: 753 HNVGEEEKVQMLYGHSERLAIAYGL----LATAEGTPIRVTKNLRVCGDCHSFCTLVSRF 808

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +   +VRDA+RFH F+ G+CSCGD+W
Sbjct: 809 FERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 272/494 (55%), Gaps = 13/494 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN-VVSWTALMCGFL 89
           G ++HG  +K G    + + N L+ +YAKC ++NGA  +FD+M  RN VVSW +++  + 
Sbjct: 77  GAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYS 136

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG     L LF +M  + V  N +T +  ++A    S ++ GMQIH   +KSG   +  
Sbjct: 137 GNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVY 196

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+++ MY + G++ EAA +F  +  K ++TWN+M+ G++  G   + L  F  +Q   
Sbjct: 197 VANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNAD 256

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+ +  S + A G LG +  G +IH + I +GF  ++  ++  +L+D Y KC C+  
Sbjct: 257 LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI--LVGNTLIDMYAKCCCMSY 314

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
             R FDL+  K +ISW++   GYAQ +   +A+EL RQL+   + VD  ++ S++     
Sbjct: 315 GGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRG 374

Query: 330 FALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              + + K+IH Y   +  GL D  + N+I+D+Y +CG+ID A  +F  +  K+VV+WT 
Sbjct: 375 LNCLGKIKEIHGYT--IRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTS 432

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA-CSHSGLVEESQEYFSRLCND 447
           +I+ Y  +GLA +A+ +F  M    +EPD V  +++LSA CS S L +  + +   +   
Sbjct: 433 MISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKG 492

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             ++  I +   +VD   R G +++A  +      + ++ +W  ++SA  +HG    G  
Sbjct: 493 FILEGSISN--TLVDMYARCGSVEDAYKIFTCTKNR-NLILWTAMISAYGMHG---YGEA 546

Query: 508 VGEILLRLDGDNPV 521
             E+ +R+  +  +
Sbjct: 547 AVELFMRMKDEKII 560



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 244/450 (54%), Gaps = 11/450 (2%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY KCG +  A  +FDKM ER++ +W A+M G++ NG A   L ++ +M    V  + +T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               +KA G++  +  G +IHG+ +K G +    V NS++ +Y+KC  IN A ++FD M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 176 AKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
            ++ +++WN++I+ Y   G   + L LF +M + G + + +TF + L+AC     +  G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  ++ SG    V   +A +LV  YV+ G + EA  +F  +E K +++W+S++ G+ Q
Sbjct: 181 QIHAAILKSGRVLDV--YVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS- 353
               +EA+E F  L+   L+ D   + S++        +  GK+IHAYA K  +G D++ 
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIK--NGFDSNI 296

Query: 354 -VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V N+++DMY KC  +      F+ M  K++++WT    GY ++    +A+ L R++ ++
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            ++ D     ++L AC     + + +E            P +++   I+D  G  G +D 
Sbjct: 357 GMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDY 414

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           A  + ES+  K  ++ W +++S C VH  L
Sbjct: 415 AVRIFESIECKDVVS-WTSMIS-CYVHNGL 442


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/690 (38%), Positives = 413/690 (59%), Gaps = 9/690 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S V +   L   L  C+    ++ G+ +HG  VK+G + +LM+NN LIDMY+KC  ++ A
Sbjct: 199 SFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEA 258

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNIKASG 124
             +FDK  ++N+VSW +++ G+ +  +      L  +M +  + +K +EFT+   +    
Sbjct: 259 QLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCL 318

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
             S +++  ++HG   + G + N +V N+ I  Y++CG +  + R+FD+M  K++ +WNA
Sbjct: 319 ERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNA 378

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GY       K L L+ +M + G  PD FT  S L AC  + S+  G +IHGF + +G
Sbjct: 379 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 438

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
              +V   I  SL+  Y+ CG    A+ +FD +E +S++SW+ +I GY+Q     EA+ L
Sbjct: 439 L--AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINL 496

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           FRQ+    +Q     +  + G  +  + +  GK++H +A K     D  VS+SI+DMY K
Sbjct: 497 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 556

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            G I  +  +F+ +  K+V +W VII GYG HG  KEA+ LF KML   ++PD   +  +
Sbjct: 557 GGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 616

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L ACSH+GLVE+  EYF+++ N   ++P++EHY+C+VD LGRAGR+D+A  LIE MP  P
Sbjct: 617 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP 676

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
              IW +LLS+CR+HG+L LG +V   LL L+ + P NYV++SN+ A +G W++  R+R 
Sbjct: 677 DSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRG 736

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
             +  GL+K AG SW+EV  ++H F  GD+  P  E++ +    +E ++   +G+     
Sbjct: 737 RMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKIS-SIGYTPDTG 795

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             LHD++EE K   LR HSEKLAI   L    LN   G  +RV+KNLR+CGDCH   K +
Sbjct: 796 SVLHDLEEEDKIGILRGHSEKLAISFGL----LNTAKGLPVRVYKNLRICGDCHNAAKFI 851

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK++    VVRD  RFH F  G+CSCGDYW
Sbjct: 852 SKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 227/417 (54%), Gaps = 8/417 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L+ C +   ++ G +LH  +     F  D +LN  +I MY+ CG  + +  VFDK+  +N
Sbjct: 5   LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +  W A++  + +N   +  +S+F ++ S +  KP+ FTL   IKA   L  +  G  IH
Sbjct: 65  LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           GM  K     +  VGN++I MY KCG + EA ++F+ MP ++L++WN++I G+   G+  
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184

Query: 197 KGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           +    FR+M   E   +PD  T  + L  C     +  G  +HG  +  G   + + ++ 
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGL--NEELMVN 242

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR--QLRERS 312
            SL+D Y KC  L EA+ +FD  ++K+++SW+S+I GYA+EE++     L +  Q  +  
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ D F + +++ V  + + ++  K++H Y+ +     +  V+N+ +  Y +CG +  + 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            +F+ M  K V +W  ++ GY ++   ++A+ L+ +M    ++PD     ++L ACS
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 88/174 (50%), Gaps = 6/174 (3%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           +E G+++H   +      +  V N+ I+ MY  CG   ++  +F+++  KN+  W  I++
Sbjct: 14  IEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVS 73

Query: 392 GYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEES-QEYFSRLCNDKR 449
            Y ++ L ++A+ +F +++ + + +PD      V+ AC+  GL++    +    +     
Sbjct: 74  AYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQIIHGMATKMD 131

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +   +   + ++   G+ G ++EA  + E MP + ++  W +++     +G L+
Sbjct: 132 LVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER-NLVSWNSIICGFSENGFLQ 184


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/687 (37%), Positives = 407/687 (59%), Gaps = 7/687 (1%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            +V  R    + L   S    L +G  +H  ++  G   DL +   L+ MYAKCG      
Sbjct: 341  VVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCR 400

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
             VF+K++ R++++W  ++ G  + GN +    ++ QM    + PN+ T    + A    +
Sbjct: 401  QVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPT 460

Query: 128  SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            ++  G +IH   +K GF ++  V N++I MY++CG I +A  +F+ M  K +I+W AMI 
Sbjct: 461  ALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIG 520

Query: 188  GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            G   +G   + L +F+ MQ+ G  P+  T+TS L AC S  ++  G +IH  +I +G   
Sbjct: 521  GLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL-- 578

Query: 248  SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +    +A +LV+ Y  CG + +AR+VFD + Q+ +++++++I GYA      EA++LF +
Sbjct: 579  ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638

Query: 308  LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
            L+E  L+ D     +M+   A+   +E  K+IH+   K     DTS+ N++V  Y KCG 
Sbjct: 639  LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGS 698

Query: 368  IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
              +A  +F++M  +NV++W  II G  +HG  ++ + LF +M ++ ++PD V ++++LSA
Sbjct: 699  FSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758

Query: 428  CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            CSH+GL+EE + YF  +  D  + P IEHY C+VD LGRAG+LDE + LI++MP + +  
Sbjct: 759  CSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTR 818

Query: 488  IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            IW  LL ACR+HG++ +     E  L+LD DN   YV +S+++A AG W+   +LRKL  
Sbjct: 819  IWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLME 878

Query: 548  SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
             +G+ K  GRSW+EV  ++H+F   D +HP +EKI+  L ++   MK E G+V   +  +
Sbjct: 879  QRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKME-GYVPDTRSVM 937

Query: 608  HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            HD+ E  KE ++  HSE+LAI   L+    +  PG  IR+FKNLRVC DCH   K ++KI
Sbjct: 938  HDVDEGEKENAVCHHSERLAIAYGLI----STLPGTPIRIFKNLRVCPDCHTATKFITKI 993

Query: 668  LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +    V RD  RFH F+ GVCSCGDYW
Sbjct: 994  VDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 161/561 (28%), Positives = 292/561 (52%), Gaps = 37/561 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G ++H   +K    FD+ + N +++MYAKCG ++ A  VFDKM  ++V
Sbjct: 251 LSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSV 310

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT ++ G+   G+++    +F +M    V PN  T    + A    ++++ G  +H  
Sbjct: 311 VSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSH 370

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +G E +  VG +++ MY+KCG   +  ++F+ +  + LI WN MI G    G  ++ 
Sbjct: 371 ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEA 430

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             ++ +MQ  G +P++ T+   L AC +  ++  G +IH  ++  GF + +   +  +L+
Sbjct: 431 SEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS--VQNALI 488

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +CG + +AR +F+ + +K +ISW+++I G A+    AEA+ +F+ +++  L+ +  
Sbjct: 489 SMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRV 548

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S++   +  A ++ G++IH    +     D  V+N++V+MY  CG + +A ++F+ M
Sbjct: 549 TYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRM 608

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +++V +  +I GY  H L KEA+ LF ++  + ++PD V Y+ +L+AC++SG +E ++
Sbjct: 609 TQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK 668

Query: 439 EYFS------------------------------RLCNDKRMKPRIEHYSCIVDSLGRAG 468
           E  S                               L  DK MK  +  ++ I+    + G
Sbjct: 669 EIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHG 728

Query: 469 RLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NY 523
           R  +   L E M    +KP I  + +LLSAC   G LE GR     + R  G  P   +Y
Sbjct: 729 RGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHY 788

Query: 524 VMMSNIHADAGSWNECERLRK 544
             M ++   AG  +E E L K
Sbjct: 789 GCMVDLLGRAGQLDEVEALIK 809



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 271/526 (51%), Gaps = 13/526 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGF 88
           G ++H  +++     D    N LI+MY +CG +  A  V++K+   ER V SW A++ G+
Sbjct: 160 GREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGY 219

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           +Q G  +  L L  +M    +     T    + +    S++E G +IH   MK+   ++ 
Sbjct: 220 VQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDV 279

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N I++MY+KCG I+EA  +FD M  KS+++W  +I GY   G+S+    +F+KMQ+ 
Sbjct: 280 NVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQE 339

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G +P+  T+ + L A     ++  G  +H  ++ +G  +     +  +LV  Y KCG   
Sbjct: 340 GVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAG--HESDLAVGTALVKMYAKCGSYK 397

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           + R+VF+ +  + +I+W+++I G A+  N  EA E++ Q++   +  +      ++    
Sbjct: 398 DCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACV 457

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           +   +  G++IH+   K     D SV N+++ MY +CG I +A  LFN+M  K++++WT 
Sbjct: 458 NPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTA 517

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I G  K GL  EA+ +F+ M    ++P+ V Y ++L+ACS    ++  +    ++  + 
Sbjct: 518 MIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI-EA 576

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            +       + +V+     G + +A+ + + M  +  +A +  ++     H    LG+E 
Sbjct: 577 GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVA-YNAMIGGYAAHN---LGKEA 632

Query: 509 GEILLRL--DGDNP--VNYVMMSNIHADAGSWNECERLRKLARSKG 550
            ++  RL  +G  P  V Y+ M N  A++GS    + +  L    G
Sbjct: 633 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDG 678



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 177/337 (52%), Gaps = 9/337 (2%)

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           D+ + + + +Q+ G   +   +   LK C  +  +  G ++H  +I         TV A 
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA- 181

Query: 256 SLVDFYVKCGCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            L++ Y++CG + EAR+V++ +   +++V SW+++++GY Q   + EA++L R++++  L
Sbjct: 182 -LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            +       ++      + +E G++IH  A K     D +V+N I++MY KCG I EA E
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F++M  K+VV+WT+II GY   G ++ A  +F+KM  + V P+ + Y+ VL+A S    
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++  +   S + N    +  +   + +V    + G   + + + E +  +  IA W T++
Sbjct: 361 LKWGKTVHSHILNAGH-ESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-WNTMI 418

Query: 494 SACRVHGDLELGREVGEILLRLDG--DNPVNYVMMSN 528
                 G+ E   E+   + R +G   N + YV++ N
Sbjct: 419 GGLAEGGNWEEASEIYHQMQR-EGMMPNKITYVILLN 454


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 400/676 (59%), Gaps = 7/676 (1%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            L  C+ +     G  +H  +++ G   +  L N L++MY +CG +  A  VF+    R++
Sbjct: 493  LSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDI 552

Query: 79   VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +SW +++ G  Q+G+ +A   LF +M    ++P++ T ++ +       ++E G QIH +
Sbjct: 553  ISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612

Query: 139  CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             ++SG + +  +GN++I+MY +CG + +A  +F  +  +++++W AMI G+   G   K 
Sbjct: 613  IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672

Query: 199  LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              LF +MQ  G  P + TF+S LKAC S   +  G ++   ++ SG  Y + T +  +L+
Sbjct: 673  FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG--YELDTGVGNALI 730

Query: 259  DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
              Y K G + +AR+VFD +  + ++SW+ +I GYAQ      A++   Q++E+ + ++ F
Sbjct: 731  SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790

Query: 319  VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               S++   + F+ +E+GK++HA   K     D  V  +++ MY KCG ++EA E+F+  
Sbjct: 791  SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850

Query: 379  PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              KNVVTW  +I  Y +HGLA +A+  F  M  + ++PDG  + ++LSAC+HSGLV E  
Sbjct: 851  TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGN 910

Query: 439  EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
              FS L +   + P IEHY C+V  LGRAGR  EA+ LI  MP  P  A+W+TLL ACR+
Sbjct: 911  RIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRI 970

Query: 499  HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
            HG++ L        L+L+  NP  YV++SN++A AG W++  ++R++   +G++K  GRS
Sbjct: 971  HGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030

Query: 559  WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            W+EVD  IH F   D +HP T +I++ L  +   M E  G+    +Y LH++ +E +E S
Sbjct: 1031 WIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEM-ERAGYSPDTQYVLHNLDKEHQETS 1089

Query: 619  LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
            L  HSE+LAI   L    L   PG  IR+FKNLR+CGDCH   K +SK++    + RD+ 
Sbjct: 1090 LCTHSERLAIAYGL----LKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSN 1145

Query: 679  RFHRFEGGVCSCGDYW 694
            RFH F+ G CSC D+W
Sbjct: 1146 RFHTFKNGKCSCEDFW 1161



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 270/493 (54%), Gaps = 4/493 (0%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V  R      L  CS +  L  G  +H  + ++G S D+ + N LI MYA+CG++  A 
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+ M +R+++SW A++ G+ +  +    + L+ QM S  VKP   T    + A    S
Sbjct: 441 ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSS 500

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +  +G  IH   ++SG + N  + N++++MY +CG I EA  +F+   A+ +I+WN+MIA
Sbjct: 501 AYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIA 560

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G+   G  +    LF +M++ G  PD+ TF S L  C +  ++  G QIH  +I SG   
Sbjct: 561 GHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQL 620

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V   +  +L++ Y++CG L +A  VF  +  ++V+SW+++I G+A +    +A ELF Q
Sbjct: 621 DVN--LGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQ 678

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           ++    +      SS++      A +++GK++ A+       LDT V N+++  Y K G 
Sbjct: 679 MQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGS 738

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           + +A ++F++MP +++++W  +I GY ++GL   A+    +M    V  +  +++++L+A
Sbjct: 739 MTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNA 798

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CS    +EE +   + +   ++M+  +   + ++    + G L+EA+ + ++   K ++ 
Sbjct: 799 CSSFSALEEGKRVHAEIVK-RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK-NVV 856

Query: 488 IWQTLLSACRVHG 500
            W  +++A   HG
Sbjct: 857 TWNAMINAYAQHG 869



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 252/474 (53%), Gaps = 4/474 (0%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +LD G ++H   V  G + D+ +   L  M+ +CG++ GA    +   +R+VV + AL+ 
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
              Q+G+ +     + QM S  V  N  T  + + A     ++  G  IH    + G   
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSS 418

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  +GNS+I MY++CG +  A  +F+ MP + LI+WNA+IAGY       + + L+++MQ
Sbjct: 419 DVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQ 478

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P   TF   L AC +  +   G  IH  ++ SG   +    +A +L++ Y +CG 
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGH--LANALMNMYRRCGS 536

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           ++EA+ VF+    + +ISW+S+I G+AQ  +   A +LF ++++  L+ D    +S++  
Sbjct: 537 IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVG 596

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             +   +E G+QIH    +    LD ++ N++++MY++CG + +A E+F+ +  +NV++W
Sbjct: 597 CKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSW 656

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           T +I G+   G  ++A  LF +M  D  +P    + ++L AC  S  ++E ++  + + N
Sbjct: 657 TAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILN 716

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
               +      + ++ +  ++G + +A+ + + MP +  I  W  +++    +G
Sbjct: 717 SG-YELDTGVGNALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGYAQNG 768



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 262/498 (52%), Gaps = 12/498 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           + R    D ++ C++   L    ++H  +V+ G   D+ L+N LI+MY KC  ++ A  V
Sbjct: 80  TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F KM  R+V+SW +L+  + Q G  K    LF +M ++   P++ T  + + A    + +
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G +IH   +++G++ +P V NS+++MY KC  +  A ++F  +  + ++++N M+  Y
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
               Y ++ + LF +M   G  PD+ T+ + L A  +   +  G +IH   +  G    +
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI 319

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +  +  +L   +V+CG +  A++  +    + V+ +++LI   AQ  +  EA E + Q+R
Sbjct: 320 R--VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              + ++     S++   +    +  G+ IH++ ++V    D  + NS++ MY +CG + 
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A ELFN MP +++++W  II GY +     EA+ L+++M  + V+P  V +L +LSAC+
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPS 485
           +S    +      ++ ++  ++  I+    + ++L     R G + EA+N+ E    +  
Sbjct: 498 NSSAYSD-----GKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDI 552

Query: 486 IAIWQTLLSACRVHGDLE 503
           I+ W ++++    HG  E
Sbjct: 553 IS-WNSMIAGHAQHGSYE 569



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 208/393 (52%), Gaps = 6/393 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  ++   A  L  C     L+ G Q+H  +++ G   D+ L N LI+MY +CG +  A 
Sbjct: 583 LEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAY 642

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF  +  RNV+SWTA++ GF   G  +    LF QM +   KP + T S+ +KA    +
Sbjct: 643 EVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSA 702

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            ++ G ++    + SG+E +  VGN++I  YSK G + +A ++FD MP + +++WN MIA
Sbjct: 703 CLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIA 762

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G     L    +MQE G + ++F+F S L AC S  ++  G ++H  ++      
Sbjct: 763 GYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQG 822

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V+  +  +L+  Y KCG L EA+ VFD   +K+V++W+++I  YAQ    ++A++ F  
Sbjct: 823 DVR--VGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNC 880

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKC 365
           + +  ++ DG   +S++       LV +G +I + + +   GL  ++ +   +V +  + 
Sbjct: 881 MDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFS-SLESQHGLSPTIEHYGCLVGLLGRA 939

Query: 366 GLIDEATELFNEMPV-KNVVTWTVIITGYGKHG 397
           G   EA  L N+MP   +   W  ++     HG
Sbjct: 940 GRFQEAETLINQMPFPPDAAVWETLLGACRIHG 972



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 231/500 (46%), Gaps = 52/500 (10%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+    +IH   +++G   +  + N +I+MY KC  +++A ++F  MP + +I+WN++I+
Sbjct: 97  SLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLIS 156

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            Y   G+  K   LF +MQ  G IP + T+ S L AC S   +  G +IH  +I +G  Y
Sbjct: 157 CYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAG--Y 214

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SL++ Y KC  L  AR+VF  I ++ V+S+++++  YAQ+  + E + LF Q
Sbjct: 215 QRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQ 274

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +    +  D     +++  F   +++++GK+IH  A       D  V  ++  M+++CG 
Sbjct: 275 MSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGD 334

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +  A +       ++VV +  +I    +HG  +EA   + +M  D V  +   YL+VL+A
Sbjct: 335 VAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNA 394

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP------ 481
           CS S  +   +   S + ++      ++  + ++    R G L  A+ L  +MP      
Sbjct: 395 CSTSKALGAGELIHSHI-SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLIS 453

Query: 482 ----------------------------VKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
                                       VKP    +  LLSAC        G+ + E +L
Sbjct: 454 WNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDIL 513

Query: 514 R--LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           R  +  +  +   +M N++   GS  E + + +  R++ +      SW       +    
Sbjct: 514 RSGIKSNGHLANALM-NMYRRCGSIMEAQNVFEGTRARDII-----SW-------NSMIA 560

Query: 572 GDDTHPLTEKIHQVLMEMEK 591
           G   H   E  +++ +EM+K
Sbjct: 561 GHAQHGSYEAAYKLFLEMKK 580


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 272/679 (40%), Positives = 403/679 (59%), Gaps = 10/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L+ C +   ++ G +LH  +     F  D +LN  +I MY+ CG  + +  VFDK+  +N
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +  W A++  + +N   +  +S+F ++ S +  KP+ FTL   IKA   L  +  G  IH
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA-RMFDVMPAKSLITWNAMIAGYVLAGYS 195
           GM  K     +  VGN++I MY KCG + EA  R+FD+M  K++ +WNA++ GY      
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L L+ +M + G  PD FT  S L AC  + S+  G +IHGF + +G   +V   I  
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL--AVDPFIGI 349

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           SL+  Y+ CG    A+ +FD +E +S++SW+ +I GY+Q     EA+ LFRQ+    +Q 
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
               +  + G  +  + +  GK++H +A K     D  VS+SI+DMY K G I  +  +F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + +  K+V +W VII GYG HG  KEA+ LF KML   ++PD   +  +L ACSH+GLVE
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +  EYF+++ N   ++P++EHY+C+VD LGRAGR+D+A  LIE MP  P   IW +LLS+
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+HG+L LG +V   LL L+ + P NYV++SN+ A +G W++  R+R   +  GL+K A
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EV  ++H F  GD+  P  E++ +    +E ++   +G+       LHD++EE K
Sbjct: 650 GCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKI-SSIGYTPDTGSVLHDLEEEDK 708

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
              LR HSEKLAI   L    LN   G  +RV+KNLR+CGDCH   K +SK++    VVR
Sbjct: 709 IGILRGHSEKLAISFGL----LNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVR 764

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F  G+CSCGDYW
Sbjct: 765 DNKRFHHFRDGICSCGDYW 783


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 256/687 (37%), Positives = 404/687 (58%), Gaps = 7/687 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V  R      L   S    L +G  +H  ++  G   D  +   L+ MYAKCG      
Sbjct: 223 VVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCR 282

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF+K++ R++++W  ++ G  + G  +    ++ QM    V PN+ T    + A    +
Sbjct: 283 QVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSA 342

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G +IH    K+GF  +  V N++I MYS+CG I +A  +FD M  K +I+W AMI 
Sbjct: 343 ALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIG 402

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G   +G+  + L ++++MQ+ G  P+  T+TS L AC S  ++  G +IH  ++ +G   
Sbjct: 403 GLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL-- 460

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           +    +  +LV+ Y  CG + +AR+VFD + Q+ +++++++I GYA      EA++LF +
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+E  L+ D     +M+   A+   +E  ++IH    K     DTSV N++V  Y KCG 
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGS 580

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
             +A+ +F +M  +NV++W  II G  +HG  ++A+ LF +M ++ V+PD V ++++LSA
Sbjct: 581 FSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSA 640

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GL+EE + YF  +  D  + P IEHY C+VD LGRAG+LDEA+ LI++MP + +  
Sbjct: 641 CSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTR 700

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           IW  LL ACR+HG++ +     E  L+LD DN V YV +S+++A AG W+   +LRKL  
Sbjct: 701 IWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLME 760

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+ K  GRSW++V  ++H+F   D +HP +EKI+  L  +   MK + G+V   +  +
Sbjct: 761 QRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMK-GYVPDTRSVM 819

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD+ E  KE ++  HSE+LAI   L+    +  PG  I +FKNLRVC DCH   K +SKI
Sbjct: 820 HDVDEGEKENAVCHHSERLAIAYGLI----STPPGTRIHIFKNLRVCPDCHTATKFISKI 875

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +    + RD  RFH F+ GVCSCGDYW
Sbjct: 876 VDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 283/532 (53%), Gaps = 35/532 (6%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  +R  +   L  C     L++G ++H   ++ G  FD+ + N +++MYAKCG +  A 
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFDKM +++VVSWT  + G+   G ++    +F +M    V PN  T  + + A    +
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +++ G  +H   + +G E +  VG +++ MY+KCG   +  ++F+ +  + LI WN MI 
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    GY ++   ++ +MQ  G +P++ T+   L AC +  ++  G +IH  +  +GF  
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +   +  +L+  Y +CG + +AR VFD + +K VISW+++I G A+    AEA+ ++++
Sbjct: 362 DIG--VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +++  ++ +    +S++   +  A +E G++IH    +     D  V N++V+MY  CG 
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS 479

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           + +A ++F+ M  +++V +  +I GY  H L KEA+ LF ++  + ++PD V Y+ +L+A
Sbjct: 480 VKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 539

Query: 428 CSHSGLVEESQE---------YFS---------------------RLCNDKRMKPRIEHY 457
           C++SG +E ++E         +FS                      +  +K  K  +  +
Sbjct: 540 CANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISW 599

Query: 458 SCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGR 506
           + I+    + GR  +A  L E M    VKP I  + +LLSAC   G LE GR
Sbjct: 600 NAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGR 651



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 279/539 (51%), Gaps = 13/539 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LER 76
           L+ C +   L  G Q+H  +++     D    N LI+MY +CG +  A  V+ K+  +ER
Sbjct: 30  LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMER 89

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            V SW A++ G++Q G  +  L L  QM    + P+  T+ + + +     ++E G +IH
Sbjct: 90  TVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIH 149

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              M++G  ++  V N I++MY+KCG I EA  +FD M  KS+++W   I GY   G S+
Sbjct: 150 FQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSE 209

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
               +F+KM++ G +P+  T+ S L A  S  ++  G  +H  ++ +G  +   T +  +
Sbjct: 210 TAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAG--HESDTAVGTA 267

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LV  Y KCG   + R+VF+ +  + +I+W+++I G A+     EA E++ Q++   +  +
Sbjct: 268 LVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPN 327

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                 ++    + A +  GK+IH+  AK     D  V N+++ MY +CG I +A  +F+
Sbjct: 328 KITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +M  K+V++WT +I G  K G   EA+ ++++M    VEP+ V Y ++L+ACS    +E 
Sbjct: 388 KMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEW 447

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +    ++  +  +       + +V+     G + +A+ + + M ++  I  +  ++   
Sbjct: 448 GRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGY 505

Query: 497 RVHGDLELGREVGEILLRL--DGDNP--VNYVMMSNIHADAGSWNECERLRKLARSKGL 551
             H    LG+E  ++  RL  +G  P  V Y+ M N  A++GS      +  L R  G 
Sbjct: 506 AAH---NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 174/337 (51%), Gaps = 9/337 (2%)

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           D  + + + +Q+ G   +   +   LK C  +  +  G Q+H  +I         TV A 
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA- 63

Query: 256 SLVDFYVKCGCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            L++ Y++CG + EAR+V+  +   +++V SW+++++GY Q   + +A++L RQ+++  L
Sbjct: 64  -LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   + S +        +E G++IH  A +     D  V+N I++MY KCG I+EA E
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F++M  K+VV+WT+ I GY   G ++ A  +F+KM  + V P+ + Y++VL+A S    
Sbjct: 183 VFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++  +   SR+ N    +      + +V    + G   + + + E +  +  IA W T++
Sbjct: 243 LKWGKAVHSRILNAGH-ESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-WNTMI 300

Query: 494 SACRVHGDLELGREVGEILLRLDG--DNPVNYVMMSN 528
                 G  E   EV   + R +G   N + YV++ N
Sbjct: 301 GGLAEGGYWEEASEVYNQMQR-EGVMPNKITYVILLN 336


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/694 (38%), Positives = 406/694 (58%), Gaps = 18/694 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           + R  LA  L+ C  +  L     +HG  +K+G  +D+ ++  L+++Y+KCG M  A  +
Sbjct: 181 TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 240

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL--- 126
           FD M ER+VV W  ++ G++Q G  K    LF +   S ++P+EF  S  +  +G L   
Sbjct: 241 FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEF--SVQLILNGCLWAG 298

Query: 127 -SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
              +E G Q+HG+ +KSG + +  V NS+++MYSK G    A  +F+ M    LI+WN+M
Sbjct: 299 TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 358

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS-----TLKACGSLGSVGGGTQIHGFL 240
           I+    +   ++ + LF  +   G  PD FT  S       KACG L  +  G QIH   
Sbjct: 359 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHA 418

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           I +GF   +   +   ++D Y+KCG +V A  VF+ I     ++W+S+I G     N  +
Sbjct: 419 IKAGFDSDLH--VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQ 476

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ ++ ++R+  +  D +  ++++   +    +EQG+Q+HA   K+    D  V  S+VD
Sbjct: 477 ALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVD 536

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG I++A  LF +M V+N+  W  ++ G  +HG A+EAV LF+ M    +EPD V+
Sbjct: 537 MYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVS 596

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           ++ +LSACSH+GL  E+ EY   + ND  ++P IEHYSC+VD+LGRAG + EA  +IE+M
Sbjct: 597 FIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 656

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P K S +I + LL ACR+ GD+E G+ V   L  L+  +   YV++SNI+A A  W++  
Sbjct: 657 PFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 716

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
             RK+ + K +KK  G SW++V   +H F   D +HP  + I+  + EM K ++E+ G+V
Sbjct: 717 DARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED-GYV 775

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
              ++ L D+++E KE SL  HSEKLAI   L+    +      IRV KNLRVCGDCH  
Sbjct: 776 PDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI----STPASTTIRVIKNLRVCGDCHNA 831

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IK +SK+ +   V+RDA RFH F  GVCSCGDYW
Sbjct: 832 IKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 163/497 (32%), Positives = 261/497 (52%), Gaps = 26/497 (5%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           + NLLL  G   H  +V  G + D  L+N+L+ MY+KCG ++ A  VFD   ER++V+W 
Sbjct: 90  THNLLL--GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWN 147

Query: 83  ALMCGFL-----QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK---ASGVLSSVENGMQ 134
           A++  +       +GNA+  L LF  + +S       TL+  +K    SG L + E    
Sbjct: 148 AILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--- 204

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +K G EW+  V  +++++YSKCGR+ +A  +FD M  + ++ WN M+ GYV  G 
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 264

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQIHGFLITSGFPYSVKTV 252
             +   LF +    G  PDEF+    L  C   G+  +  G Q+HG  + SG    V   
Sbjct: 265 EKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS-- 322

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +A SLV+ Y K GC   AR VF+ ++   +ISW+S+I   AQ     E++ LF  L    
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382

Query: 313 LQVDGFVLSSMMGVFADFA-----LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+ D F L+S+    A  A     L++QGKQIHA+A K     D  V++ I+DMY+KCG 
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +  A  +FN +   + V WT +I+G   +G   +A+ ++ +M    V PD   +  ++ A
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 502

Query: 428 CSHSGLVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            S    +E+ ++  + +   D    P +   + +VD   + G +++A  L + M V+ +I
Sbjct: 503 SSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NI 559

Query: 487 AIWQTLLSACRVHGDLE 503
           A+W  +L     HG+ E
Sbjct: 560 ALWNAMLVGLAQHGNAE 576


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/676 (38%), Positives = 402/676 (59%), Gaps = 9/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +NL L  G ++HG ++  GF  +L +   ++ +YAKC +++ A  +F++M  +++
Sbjct: 152 LQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDL 211

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT L+ G+ QNG+AK  L L  QM  +  KP+  TL + + A   + ++  G  IHG 
Sbjct: 212 VSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGY 271

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +SGFE    V N+++DMY KCG    A  +F  M +K++++WN MI G    G S++ 
Sbjct: 272 AFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEA 331

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F KM + GE+P   T    L AC +LG +  G  +H  L       +V   +  SL+
Sbjct: 332 FATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS--VMNSLI 389

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F+ +E K+ ++W+++ILGYAQ   + EA+ LF  ++ + +++D F
Sbjct: 390 SMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCF 448

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L  ++   ADF++  Q K IH  A +     +  VS ++VDMY KCG I  A +LF+ M
Sbjct: 449 TLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMM 508

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GYG HG+ KE + LF +M    V+P+ + +L+V+SACSHSG VEE  
Sbjct: 509 QERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGL 568

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
             F  +  D  ++P ++HYS +VD LGRAG+LD+A N I+ MP+KP I++   +L AC++
Sbjct: 569 LLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKI 628

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG +  + L +LD D    +V+++NI+A    W++  ++R     KGL K  G S
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  EIH FY G   HP ++KI+  L  +   +K   G+V     ++HD++E+ K++ 
Sbjct: 689 WVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAA-GYVPDPD-SIHDVEEDVKKQL 746

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L    LN  PG  + + KNLRVCGDCH+  K +S +     +VRD  
Sbjct: 747 LSSHSERLAIAFGL----LNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLR 802

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 803 RFHHFKNGSCSCGDYW 818



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 182/354 (51%), Gaps = 17/354 (4%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QI    +K+GF    +    +I ++ K G  +EAAR+F+ +  K  + ++ M+ GY    
Sbjct: 65  QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124

Query: 194 YSDKGLLLFRKMQEHGEIPDEF-----TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
                L  F +M     + DE       +   L+ CG    +  G +IHG +IT+GF  +
Sbjct: 125 SLGDALCFFLRM-----MCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESN 179

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +  + A  ++  Y KC  +  A ++F+ ++ K ++SW++L+ GYAQ  +   A++L  Q+
Sbjct: 180 LFVMTA--VMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQM 237

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCG 366
           +E   + D   L S++   AD   +  G+ IH YA +  SG ++  +V+N+++DMY KCG
Sbjct: 238 QEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFR--SGFESLVNVTNALLDMYFKCG 295

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
               A  +F  M  K VV+W  +I G  ++G ++EA   F KML +   P  V  + VL 
Sbjct: 296 SARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLL 355

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           AC++ G +E    +  +L +  ++   +   + ++    +  R+D A ++  ++
Sbjct: 356 ACANLGDLERGW-FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL 408



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 123/225 (54%), Gaps = 1/225 (0%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           V  R  +   L  C+    L+ G  +H  L K+    ++ + N LI MY+KC  ++ A +
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAAS 403

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F+  LE+  V+W A++ G+ QNG  K  L+LFC M S  +K + FTL   I A    S 
Sbjct: 404 IFNN-LEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSV 462

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
                 IHG+ +++  + N  V  +++DMY+KCG I  A ++FD+M  + +ITWNAMI G
Sbjct: 463 NRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           Y   G   + L LF +MQ+    P++ TF S + AC   G V  G
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG 567


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 247/676 (36%), Positives = 402/676 (59%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C+    L+ G ++H  + ++G+  ++ +   ++ MY KCG M  A  VFD +  RNV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ GF Q+G        F +M  S ++PN  T  + + A    S+++ G QI   
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V  +++ MY+KCG + +A R+F+ +  ++++ WNAMI  YV     D  
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNA 498

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F+ + + G  P+  TFTS L  C S  S+  G  +H  ++ +G    +   ++ +LV
Sbjct: 499 LATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH--VSNALV 556

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             +V CG L+ A+ +F+ + ++ ++SW+++I G+ Q      A + F+ ++E  ++ D  
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             + ++   A    + +G+++HA   +     D  V   ++ MY KCG I++A ++F+++
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KNV +WT +ITGY +HG  KEA+ LF +M  + V+PD + ++  LSAC+H+GL+EE  
Sbjct: 677 PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  +  ++PR+EHY C+VD  GRAG L+EA   I  M V+P   +W  LL AC+V
Sbjct: 737 HHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++EL  +  +  L LD ++   +V++SNI+A AG W E  ++RK+   +G+ K  G+S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD ++H FY  D THP TE+IH  L  +   M+ +LG+V   +Y LHD+++  KE++
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR-QLGYVPDTRYVLHDVEDNEKEQA 914

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L    L   P   I + KNLRVCGDCH   K +SKI K   + RD+ 
Sbjct: 915 LFYHSERLAITYGL----LKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSN 970

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGD+W
Sbjct: 971 RFHHFKDGVCSCGDFW 986



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 274/512 (53%), Gaps = 7/512 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           V  S+  +++     L  C+    +D G +L+  ++K G+  DL +   LI+M+ KCG++
Sbjct: 203 VQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDI 262

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  VFD +  R++V+WT+++ G  ++G  K   +LF +M    V+P++    + ++A 
Sbjct: 263 GDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
               ++E G ++H    + G++    VG +I+ MY+KCG + +A  +FD++  +++++W 
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           AMIAG+   G  D+  L F KM E G  P+  TF S L AC S  ++  G QI   +I +
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G  Y     +  +L+  Y KCG L +A RVF+ I +++V++W+++I  Y Q E    A+ 
Sbjct: 443 G--YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            F+ L +  ++ +    +S++ V      +E GK +H    K     D  VSN++V M++
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            CG +  A  LFN+MP +++V+W  II G+ +HG  + A   F+ M    ++PD + +  
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           +L+AC+    + E +   + L  +      +   + ++    + G +++A  +   +P K
Sbjct: 621 LLNACASPEALTEGRRLHA-LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-K 678

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            ++  W ++++    HG    G+E  E+  ++
Sbjct: 679 KNVYSWTSMITGYAQHGR---GKEALELFYQM 707



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 284/536 (52%), Gaps = 7/536 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           RQ  +  L+ C K   L  G +++  + K G   D+ + N LI+MYAKCG    A  +FD
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD 169

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            M E++V SW  L+ G++Q+G  +    L  QM   SVKP++ T  + + A     +V+ 
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G +++ + +K+G++ +  VG ++I+M+ KCG I +A ++FD +P + L+TW +MI G   
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   +   LF++M+E G  PD+  F S L+AC    ++  G ++H  +   G  +  + 
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG--WDTEI 347

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +++  Y KCG + +A  VFDL++ ++V+SW+++I G+AQ   + EA   F ++ E 
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ +     S++G  +  + +++G+QI  +  +   G D  V  +++ MY KCG + +A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F ++  +NVV W  +IT Y +H     A+  F+ +L + ++P+   + ++L+ C  S
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             +E  + +   L     ++  +   + +V      G L  AKNL   MP K  +  W T
Sbjct: 528 DSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNT 585

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERLRKL 545
           +++    HG  ++  +  + +++  G  P  + +  + N  A   +  E  RL  L
Sbjct: 586 IIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFTGLLNACASPEALTEGRRLHAL 640



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 236/461 (51%), Gaps = 17/461 (3%)

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           G C VF  +  ++     A++    + G     + +  ++ SS ++    T S  ++   
Sbjct: 64  GRCVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCI 121

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
              ++ +G +I+    KSG + +  + N++I+MY+KCG    A ++FD M  K + +WN 
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GYV  G  ++   L  +M +    PD+ TF S L AC    +V  G +++  ++ +G
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +     +  +L++ ++KCG + +A +VFD +  + +++W+S+I G A+     +A  L
Sbjct: 242 --WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNL 299

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F+++ E  +Q D     S++        +EQGK++HA   +V    +  V  +I+ MY K
Sbjct: 300 FQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTK 359

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +++A E+F+ +  +NVV+WT +I G+ +HG   EA   F KM+   +EP+ V ++++
Sbjct: 360 CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSI 419

Query: 425 LSACSHSGLVEESQEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           L ACS    ++  Q+    +      +D R++      + ++    + G L +A  + E 
Sbjct: 420 LGACSSPSALKRGQQIQDHIIEAGYGSDDRVR------TALLSMYAKCGSLKDAHRVFEK 473

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +  K ++  W  +++A   H   +      + LL+ +G  P
Sbjct: 474 IS-KQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKP 512


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/683 (38%), Positives = 410/683 (60%), Gaps = 13/683 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR CS   L+  G  +HG +VK GF  ++ +   L+DMYAKC  ++ A  +F K L
Sbjct: 165 LGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLF-KGL 223

Query: 75  E---RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           E   +N V WTA++ G+ QNG+    +  F  M +  V+ N++T  T + A   + +   
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+HG  +KSGF  N  V ++++DMY+KCG +  A  M + M    +++WN+++ G+V 
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  ++ L LF+ M       D++TF S L  C  +GS+   + +HG +I +GF      
Sbjct: 344 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC-VVGSINPKS-VHGLIIKTGF--ENYK 399

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +++ +LVD Y K G +  A  VF+ + +K VISW+SL+ GYAQ  +  E++++F  +R  
Sbjct: 400 LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  D F+++S++   A+  L+E GKQ+H    K       SV NS+V MY KCG +D+A
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 519

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F  M VK+V+TWT II GY ++G  + ++  +  M+     PD + ++ +L ACSH+
Sbjct: 520 DAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 579

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E ++YF ++     +KP  EHY+C++D  GR+G+LDEAK L++ M VKP   +W++
Sbjct: 580 GLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKS 639

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLSACRVH +LEL       L  L+  N + YVM+SN+++ +  WN+  ++RKL +SKG+
Sbjct: 640 LLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
            K  G SW+E++  ++ F   D  HP   +I+  + E+  R+KE  G+V  + ++LHD+ 
Sbjct: 700 VKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEA-GYVPDMSFSLHDMD 758

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E KE  L  HSEKLA+   L    L   P   IR+FKNLRVCGDCH  +K +S++    
Sbjct: 759 KEGKEVGLAYHSEKLAVAFGL----LAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRH 814

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            ++RD+  FH F  G CSCGDYW
Sbjct: 815 IILRDSNCFHHFREGECSCGDYW 837



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 240/478 (50%), Gaps = 41/478 (8%)

Query: 50  NNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-------- 101
            N L++  +K G++N A  +FDKM +++  SW  ++  ++  G       LF        
Sbjct: 68  TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127

Query: 102 ----------CQMGSS-------------SVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
                     C+ G                 K ++FTL + ++    L  ++ G  IHG 
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSD 196
            +K+GFE N  V   ++DMY+KC  ++EA  +F  +    K+ + W AM+ GY   G   
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K +  FR M   G   +++TF + L AC S+ +   G Q+HGF++ SGF  +V   +  +
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV--YVQSA 305

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y KCG L  A+ + + +E   V+SW+SL++G+ +     EA+ LF+ +  R++++D
Sbjct: 306 LVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKID 365

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            +   S++      ++    K +H    K        VSN++VDMY K G +D A  +F 
Sbjct: 366 DYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFE 423

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE- 435
           +M  K+V++WT ++TGY ++   +E++ +F  M +  V PD     ++LSAC+   L+E 
Sbjct: 424 KMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEF 483

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
             Q +   + +  R    +  Y+ +V    + G LD+A  +  SM VK  I  W  ++
Sbjct: 484 GKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDADAIFVSMQVKDVIT-WTAII 538



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 48/419 (11%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM-------------------------- 185
           N +++  SK G++N+A ++FD MP K   +WN M                          
Sbjct: 69  NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128

Query: 186 -----IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
                I+GY   G   +   LFR M+  G    +FT  S L+ C SLG +  G  IHGF+
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE--QKSVISWSSLILGYAQEENL 298
           + +GF  +V  V    LVD Y KC C+ EA  +F  +E  +K+ + W++++ GYAQ  + 
Sbjct: 189 VKNGFEGNVFVVTG--LVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDG 246

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            +A+E FR +  + ++ + +   +++   +       G+Q+H +  K   G +  V +++
Sbjct: 247 YKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSAL 306

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           VDMY KCG +  A  +   M   +VV+W  ++ G+ +HGL +EA+ LF+ M   +++ D 
Sbjct: 307 VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD 366

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIVDSLGRAGRLDEAK 474
             + +VL+ C    +  +S        +   +K   E+Y    + +VD   + G +D A 
Sbjct: 367 YTFPSVLNCCVVGSINPKS-------VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAY 419

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
            + E M  K  I+ W +L++    +   E   ++    +R+ G NP  +++ S + A A
Sbjct: 420 TVFEKMLEKDVIS-WTSLVTGYAQNNSHEESLKIF-CDMRVTGVNPDQFIVASILSACA 476


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/680 (38%), Positives = 392/680 (57%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+ N  L  G QLH  ++K G S D+++   L+D+Y  C ++  A  +F    
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             NVV W  ++  F +  N      +F QM    + PN+FT  + ++    + +++ G Q
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+GF++N  V + +IDMY+K G+++ A  +   +    +++W A+I+GY     
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L  F++M   G   D   F+S + AC  + ++  G QIH     SG  YS    I 
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSG--YSEDLSIG 554

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  Y +CG + EA   F+ I+ K  ISW+ LI G+AQ     +A+++F Q+    L+
Sbjct: 555 NALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLE 614

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              F   S +   A+ A ++QGKQIHA   K     D  VSN+++  Y KCG I++A   
Sbjct: 615 ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EMP KN V+W  +ITGY +HG   EAV LF KM      P+ V ++ VLSACSH GLV
Sbjct: 675 FCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLV 734

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +   YF  +  +  + P+  HY+C+VD + RAG L  A+  IE MP++P   IW+TLLS
Sbjct: 735 TKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLS 794

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC VH ++E+G    + LL L+ ++   YV++SN++A +G W+  ++ R++ R++G+KK 
Sbjct: 795 ACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSW+EV   +H FY GD  HPL +KI++ L E+ K+   E+G+       L+D+++E 
Sbjct: 855 PGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKK-AAEIGYFQDRYSLLNDVEQEQ 913

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ ++ +HSEKLAI   L    L+      I V KNLRVC DCH +IK +SKI     +V
Sbjct: 914 KDPTVYIHSEKLAITFGL----LSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIV 969

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFH FEGG+CSC DYW
Sbjct: 970 RDAYRFHHFEGGICSCKDYW 989



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 253/486 (52%), Gaps = 15/486 (3%)

Query: 15  LADSLRCCSKNLL-LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A  LR CS + + + Y  Q+H  ++  G     +++N LI +YAK G +  A  VFD +
Sbjct: 114 FASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL 173

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             ++ VSW A++ GF QNG  +  + LFC+M ++ + P  +  S+ +     +   + G 
Sbjct: 174 CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE 233

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H +  K G      V N+++ +YS+      A ++F  M +K  +++N++I+G    G
Sbjct: 234 QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQG 293

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +SD  L LF KM+     PD  T  S L AC S G++  G Q+H ++I +G   S   ++
Sbjct: 294 FSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI--SSDMIV 351

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            G+L+D YV C  +  A  +F   + ++V+ W+ +++ + + +NL+E+  +FRQ++ + L
Sbjct: 352 EGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGL 411

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             + F   S++        ++ G+QIH    K     +  V + ++DMY K G +D A  
Sbjct: 412 IPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHV 471

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   +   +VV+WT +I+GY +H L  EA+  F++ML   ++ D + + + +SAC+    
Sbjct: 472 ILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQA 531

Query: 430 -HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
            + G    +Q Y S    D  +       + +V    R GR+ EA    E +  K SI+ 
Sbjct: 532 LNQGRQIHAQSYVSGYSEDLSIG------NALVSLYARCGRIKEAYLEFEKIDAKDSIS- 584

Query: 489 WQTLLS 494
           W  L+S
Sbjct: 585 WNGLIS 590



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 252/482 (52%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K  L D G QLH  + K G S +  + N L+ +Y++      A  VF KM  ++ 
Sbjct: 220 LSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE 279

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+ +L+ G  Q G +   L LF +M    +KP+  T+++ + A     ++  G Q+H  
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+G   + +V  +++D+Y  C  I  A  MF     ++++ WN M+  +       + 
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSES 399

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +FR+MQ  G IP++FT+ S L+ C S+G++  G QIH  +I +GF ++V   +   L+
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV--YVCSVLI 457

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A  +   + +  V+SW++LI GYAQ    AEA++ F+++  R +Q D  
Sbjct: 458 DMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNI 517

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             SS +   A    + QG+QIHA +       D S+ N++V +Y +CG I EA   F ++
Sbjct: 518 GFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKI 577

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ ++W  +I+G+ + G  ++A+ +F +M    +E     + + +SA ++   +++ +
Sbjct: 578 DAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGK 637

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  + +   +     IE  + ++    + G +++A+     MP K  ++ W  +++    
Sbjct: 638 QIHAMIIK-RGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQ 695

Query: 499 HG 500
           HG
Sbjct: 696 HG 697



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 246/470 (52%), Gaps = 9/470 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LHG ++K+GF  + +L N L+D+Y   G+++G   VF+ M  R+V SW  ++ GF++  
Sbjct: 31  KLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKK 90

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
            +   L LF  M   +V P E + ++ ++A SG    +    QIH   +  G   +P++ 
Sbjct: 91  MSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS 150

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N +I +Y+K G I  A ++FD +  K  ++W AMI+G+   GY ++ + LF +M   G  
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P  + F+S L  C  +     G Q+H  +   G   S++T +  +LV  Y +    V A 
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG--SSLETYVCNALVTLYSRMPNFVSAE 268

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           +VF  ++ K  +S++SLI G AQ+     A+ELF +++   L+ D   ++S++   A   
Sbjct: 269 KVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNG 328

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            + +G+Q+H+Y  K     D  V  +++D+Y+ C  I  A E+F     +NVV W V++ 
Sbjct: 329 ALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLV 388

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            +GK     E+  +FR+M +  + P+   Y ++L  C+  G ++  ++  +++    +  
Sbjct: 389 AFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVI---KTG 445

Query: 452 PRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            +   Y C  ++D   + G+LD A  ++ ++  +  +  W  L+S    H
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTL-TEDDVVSWTALISGYAQH 494



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 90/166 (54%), Gaps = 5/166 (3%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           K++H    K+  G ++ + N +VD+Y   G +D   ++F +MP ++V +W  II+G+ + 
Sbjct: 30  KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEK 89

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-HSGLVEESQEYFSR-LCNDKRMKPRI 454
            ++   + LF  M+ ++V P  +++ +VL ACS H   +  +++  +R +C+     P I
Sbjct: 90  KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + ++    + G +  A+ + +++  K S++ W  ++S    +G
Sbjct: 150 S--NPLIGLYAKNGLIISARKVFDNLCTKDSVS-WVAMISGFSQNG 192


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/676 (36%), Positives = 396/676 (58%), Gaps = 7/676 (1%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            L  C+ +     G  +H  +++ G   +  L N L++MY +CG +  A  VF+    R+V
Sbjct: 438  LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497

Query: 79   VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +SW +++ G  Q+G+ +    LF +M +  ++P+  T ++ +       ++E G QIHG 
Sbjct: 498  ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557

Query: 139  CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              +SG + +  +GN++I+MY +CG + +A  +F  +  + +++W AMI G    G   K 
Sbjct: 558  ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKA 617

Query: 199  LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
            + LF +MQ  G  P + TF+S LK C S   +  G ++  +++ SG  Y + T +  +L+
Sbjct: 618  IELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSG--YELDTGVGNALI 675

Query: 259  DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
              Y K G + +AR VFD +  + ++SW+ +I GYAQ      A+E   Q++E+ +  + F
Sbjct: 676  SAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKF 735

Query: 319  VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               S++   + F+ +E+GK++HA   K     D  V  +++ MY KCG   EA E+F+ +
Sbjct: 736  SFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI 795

Query: 379  PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              KNVVTW  +I  Y +HGLA +A+G F  M  + ++PDG  + ++LSAC+H+GLV E  
Sbjct: 796  IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGY 855

Query: 439  EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            + FS + ++  + P IEHY C+V  LGRA R  EA+ LI  MP  P  A+W+TLL ACR+
Sbjct: 856  QIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRI 915

Query: 499  HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
            HG++ L        L+L+  NP  Y+++SN++A AG W++  ++R++   +G++K  GRS
Sbjct: 916  HGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975

Query: 559  WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            W+EVD  IH F   D +HP T +I+  L  +   M EE G+    ++ LHD+ +  +E S
Sbjct: 976  WIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM-EEAGYFPDTQHVLHDLGKAHQETS 1034

Query: 619  LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
            L  HSE+LAI   L++      PG  IR+FKNLR+CGDCH   K +SK++    + RD+ 
Sbjct: 1035 LCTHSERLAIAYGLIK----TPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSN 1090

Query: 679  RFHRFEGGVCSCGDYW 694
            RFH F+ G CSC DYW
Sbjct: 1091 RFHSFKNGKCSCEDYW 1106



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 269/482 (55%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS +  L+ G  +H  + + G S D+ + N LI MYA+CG++  A  +F  M +R++
Sbjct: 337 LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDL 396

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +  +    + L+ QM S  VKP   T    + A    S+  +G  IH  
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHED 456

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SG + N  + N++++MY +CG + EA  +F+   A+ +I+WN+MIAG+   G  +  
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF++MQ     PD  TF S L  C +  ++  G QIHG +  SG    V   +  +L+
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN--LGNALI 574

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y++CG L +AR VF  ++ + V+SW+++I G A +    +A+ELF Q++    +    
Sbjct: 575 NMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKS 634

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             SS++ V    A +++GK++ AY       LDT V N+++  Y K G + +A E+F++M
Sbjct: 635 TFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKM 694

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P +++V+W  II GY ++GL + AV    +M   DV P+  +++++L+ACS    +EE +
Sbjct: 695 PSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGK 754

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
              + +   ++++  +   + ++    + G   EA+ + +++ ++ ++  W  +++A   
Sbjct: 755 RVHAEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQ 812

Query: 499 HG 500
           HG
Sbjct: 813 HG 814



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 261/498 (52%), Gaps = 12/498 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           +ER      L+ C++  LL    ++H  +V+     D+ L+N LI+MY KC  +  A  V
Sbjct: 25  TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F +M  R+V+SW +L+  + Q G  K    LF +M ++   PN+ T  + + A    + +
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           ENG +IH   +K+G++ +P V NS++ MY KCG +  A ++F  +  + ++++N M+  Y
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
               Y  + L LF +M   G  PD+ T+ + L A  +   +  G +IH   +  G    +
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +  +  +LV   V+CG +  A++ F     + V+ +++LI   AQ  +  EA E + ++R
Sbjct: 265 R--VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              + ++     S++   +    +E GK IH++ ++     D  + N+++ MY +CG + 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A ELF  MP +++++W  II GY +     EA+ L+++M  + V+P  V +L +LSAC+
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPS 485
           +S    +      ++ ++  ++  I+    + ++L     R G L EA+N+ E    +  
Sbjct: 443 NSSAYAD-----GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497

Query: 486 IAIWQTLLSACRVHGDLE 503
           I+ W ++++    HG  E
Sbjct: 498 IS-WNSMIAGHAQHGSYE 514



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 201/386 (52%), Gaps = 6/386 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C     L+ G Q+HG + + G   D+ L N LI+MY +CG +  A  VF  + 
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ 594

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V+SWTA++ G    G     + LF QM +   +P + T S+ +K     + ++ G +
Sbjct: 595 HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKK 654

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +    + SG+E +  VGN++I  YSK G + +A  +FD MP++ +++WN +IAGY   G 
Sbjct: 655 VIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGL 714

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               +    +MQE   +P++F+F S L AC S  ++  G ++H  ++       V+  + 
Sbjct: 715 GQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVR--VG 772

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y KCG   EA+ VFD I +K+V++W+++I  YAQ    ++A+  F  + +  ++
Sbjct: 773 AALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIK 832

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            DG   +S++       LV +G QI + + +   G+  ++ +   +V +  +     EA 
Sbjct: 833 PDGSTFTSILSACNHAGLVLEGYQIFS-SMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 891

Query: 373 ELFNEMPV-KNVVTWTVIITGYGKHG 397
            L N+MP   +   W  ++     HG
Sbjct: 892 TLINQMPFPPDAAVWETLLGACRIHG 917



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 197/415 (47%), Gaps = 37/415 (8%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           +IH   +++    +  + N +I+MY KC  + +A ++F  MP + +I+WN++I+ Y   G
Sbjct: 48  RIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQG 107

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  K   LF +MQ  G IP++ T+ S L AC S   +  G +IH  +I +G  Y     +
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG--YQRDPRV 165

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SL+  Y KCG L  AR+VF  I  + V+S+++++  YAQ+  + E + LF Q+    +
Sbjct: 166 QNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D     +++  F   +++++GK+IH    +     D  V  ++V M ++CG +D A +
Sbjct: 226 SPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQ 285

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F     ++VV +  +I    +HG   EA   + +M  D V  +   YL++L+ACS S  
Sbjct: 286 AFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKA 345

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP------------ 481
           +E  +   S +  D      ++  + ++    R G L +A+ L  +MP            
Sbjct: 346 LEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIA 404

Query: 482 ----------------------VKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
                                 VKP    +  LLSAC        G+ + E +LR
Sbjct: 405 GYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/676 (36%), Positives = 401/676 (59%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C+    L+ G ++H  + ++G+  ++ +   ++ MY KCG M  A  VFD +  RNV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ GF Q+G        F +M  S ++PN  T  + + A    S+++ G QI   
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V  +++ MY+KCG + +A R+F+ +  ++++ WNAMI  YV     D  
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNA 498

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F+ + + G  P+  TFTS L  C S  S+  G  +H  ++ +G    +   ++ +LV
Sbjct: 499 LATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH--VSNALV 556

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             +V CG L+ A+ +F+ + ++ ++SW+++I G+ Q      A + F+ ++E  ++ D  
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             + ++   A    + +G+++HA   +     D  V   ++ MY KCG I++A ++F+++
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KNV +WT +I GY +HG  KEA+ LF +M  + V+PD + ++  LSAC+H+GL+EE  
Sbjct: 677 PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  +  ++PR+EHY C+VD  GRAG L+EA   I  M V+P   +W  LL AC+V
Sbjct: 737 HHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++EL  +  +  L LD ++   +V++SNI+A AG W E  ++RK+   +G+ K  G+S
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD ++H FY  D THP TE+IH  L  +   M+ +LG+V   +Y LHD+++  KE++
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMR-QLGYVPDTRYVLHDVEDNEKEQA 914

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L    L   P   I + KNLRVCGDCH   K +SKI K   + RD+ 
Sbjct: 915 LFYHSERLAITYGL----LKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSN 970

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGD+W
Sbjct: 971 RFHHFKDGVCSCGDFW 986



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 274/512 (53%), Gaps = 7/512 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           V  S+  +++     L  C+    +D G +L+  ++K G+  DL +   LI+M+ KCG++
Sbjct: 203 VQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDI 262

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  VFD +  R++V+WT+++ G  ++G  K   +LF +M    V+P++    + ++A 
Sbjct: 263 GDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
               ++E G ++H    + G++    VG +I+ MY+KCG + +A  +FD++  +++++W 
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           AMIAG+   G  D+  L F KM E G  P+  TF S L AC S  ++  G QI   +I +
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G  Y     +  +L+  Y KCG L +A RVF+ I +++V++W+++I  Y Q E    A+ 
Sbjct: 443 G--YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            F+ L +  ++ +    +S++ V      +E GK +H    K     D  VSN++V M++
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            CG +  A  LFN+MP +++V+W  II G+ +HG  + A   F+ M    ++PD + +  
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           +L+AC+    + E +   + L  +      +   + ++    + G +++A  +   +P K
Sbjct: 621 LLNACASPEALTEGRRLHA-LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-K 678

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            ++  W ++++    HG    G+E  E+  ++
Sbjct: 679 KNVYSWTSMIAGYAQHGR---GKEALELFYQM 707



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 284/536 (52%), Gaps = 7/536 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           RQ  +  L+ C K   L  G +++  + K G   D+ + N LI+MYAKCG    A  +FD
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFD 169

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            M E++V SW  L+ G++Q+G  +    L  QM   SVKP++ T  + + A     +V+ 
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G +++ + +K+G++ +  VG ++I+M+ KCG I +A ++FD +P + L+TW +MI G   
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   +   LF++M+E G  PD+  F S L+AC    ++  G ++H  +   G  +  + 
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG--WDTEI 347

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +++  Y KCG + +A  VFDL++ ++V+SW+++I G+AQ   + EA   F ++ E 
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ +     S++G  +  + +++G+QI  +  +   G D  V  +++ MY KCG + +A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F ++  +NVV W  +IT Y +H     A+  F+ +L + ++P+   + ++L+ C  S
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             +E  + +   L     ++  +   + +V      G L  AKNL   MP K  +  W T
Sbjct: 528 DSLELGK-WVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNT 585

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERLRKL 545
           +++    HG  ++  +  + +++  G  P  + +  + N  A   +  E  RL  L
Sbjct: 586 IIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFTGLLNACASPEALTEGRRLHAL 640



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 236/461 (51%), Gaps = 17/461 (3%)

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           G C VF  +  ++     A++    + G     + +  ++ SS ++    T S  ++   
Sbjct: 64  GRCVVFADI--KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCI 121

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
              ++ +G +I+    KSG + +  + N++I+MY+KCG    A ++FD M  K + +WN 
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GYV  G  ++   L  +M +    PD+ TF S L AC    +V  G +++  ++ +G
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +     +  +L++ ++KCG + +A +VFD +  + +++W+S+I G A+     +A  L
Sbjct: 242 --WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNL 299

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F+++ E  +Q D     S++        +EQGK++HA   +V    +  V  +I+ MY K
Sbjct: 300 FQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTK 359

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +++A E+F+ +  +NVV+WT +I G+ +HG   EA   F KM+   +EP+ V ++++
Sbjct: 360 CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSI 419

Query: 425 LSACSHSGLVEESQEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           L ACS    ++  Q+    +      +D R++      + ++    + G L +A  + E 
Sbjct: 420 LGACSSPSALKRGQQIQDHIIEAGYGSDDRVR------TALLSMYAKCGSLKDAHRVFEK 473

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +  K ++  W  +++A   H   +      + LL+ +G  P
Sbjct: 474 IS-KQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKP 512


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 400/680 (58%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    L  G QLH  L+K G SFD +    L+D+Y KCG++  A  +F+   
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             NVV W  ++  + Q  +      +F QM ++ + PN+FT    ++       +E G Q
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQ 367

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+GFE +  V   +IDMYSK G +++A ++ +++  + +++W +MIAGYV   +
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L  F++MQ+ G  PD     S   AC  + ++  G QIH  +  SG  Y+    I 
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG--YAADISIW 485

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV+ Y +CG   EA  +F  IE K  I+W+ LI G+ Q     +A+ +F ++ +   +
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAK 545

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F   S +   A+ A ++QGKQ+H  A K     +T V+N+++ +Y KCG I++A  +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+EM ++N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE   YF  + N   + P  +HY+C+VD LGRAG+LD A+  ++ MP+  +  IW+TLLS
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC+VH ++E+G    + LL L+  +  +YV++SN +A  G W   +++RK+ + +G++K 
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSW+EV   +H F+ GD  HPL+++I++ L E+  R+  ++G+        H+ ++E 
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL-SKIGYKQENPNLFHEKEQEQ 844

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ +  VHSEKLA+   L    +   P   +RV KNLRVC DCH ++K  S++ +   V+
Sbjct: 845 KDPTAFVHSEKLAVAFGL----MTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVL 900

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F  G CSCGDYW
Sbjct: 901 RDVYRFHHFNSGSCSCGDYW 920



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 257/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H  + K  F  +  + N LI +Y   G    A  VF  ML
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V++  L+ G  Q G+ +  L +F +M  S ++P+  T+++ + A   +  ++ G Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G  ++ +   S++D+Y KCG I  A  +F++    +++ WN M+  Y     
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   +F +MQ  G  P++FT+   L+ C   G +  G QIH   I +GF   +   ++
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM--YVS 384

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K GCL +AR++ +++E++ V+SW+S+I GY Q +   EA+  F+++++  + 
Sbjct: 385 GVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S     A    + QG QIHA         D S+ N++V++Y +CG  +EA  L
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E+  K+ +TW  +I+G+G+  L K+A+ +F KM     + +   +++ +SA ++   +
Sbjct: 505 FREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADI 564

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++   R           E  + ++   G+ G +++AK +   M ++  ++ W T+++
Sbjct: 565 KQGKQVHGRAVKTGHTS-ETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIIT 622

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 623 SCSQHG 628



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 266/532 (50%), Gaps = 25/532 (4%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +++H   V  G   D ++ N LID+YAK G +  A  VF ++  R+ VSW A++ G+ Q+
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  K    L+ QM  ++V P  + LS+ + A         G  IH    K  F     VG
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++I +Y   G    A R+F  M     +T+N +I+G+   G+ +  L +F +MQ  G  
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD  T  S L AC S+G +  G Q+H +L+ +G  +    +  GSL+D YVKCG +  A 
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY--ITEGSLLDLYVKCGDIETAH 300

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F+L ++ +V+ W+ +++ Y Q  +LA++ E+F Q++   +  + F    ++       
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E G+QIH+ + K     D  VS  ++DMY K G +D+A ++   +  ++VV+WT +I 
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIA 420

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVEESQEYFSRLCN 446
           GY +H   +EA+  F++M    V PD +   +  SAC+       GL   ++ Y S    
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           D      I  ++ +V+   R GR +EA +L   +  K  I  W  L+S     G   L +
Sbjct: 481 D------ISIWNTLVNLYARCGRSEEAFSLFREIEHKDEIT-WNGLISG---FGQSRLYK 530

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           +   + +++ G     Y + + I A +        L  LA  K  K+V GR+
Sbjct: 531 QALMVFMKM-GQAGAKYNVFTFISAISA-------LANLADIKQGKQVHGRA 574


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/666 (38%), Positives = 408/666 (61%), Gaps = 7/666 (1%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           +YG+++HG L+K+G+  D    N L+DMYAK G    A AVF ++ + ++VSW A++ G 
Sbjct: 205 NYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGC 264

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + +      L L  +MGS  V P+ FTLS+ +KA   +  V+ G Q+H   MK   E + 
Sbjct: 265 VLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDS 324

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG  +IDMYSKCG + +A  +FD+MP K +I WN++I+GY   GY  + + LF  M + 
Sbjct: 325 FVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE 384

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G   ++ T ++ LK+     + G   Q+H   I SG+ Y     +A SL+D Y KC  L 
Sbjct: 385 GLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYD--GYVANSLLDSYGKCCLLE 442

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A +VF++   + +++++S+I  Y+Q     EA++++ ++++R ++ D F+ SS+    A
Sbjct: 443 DAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACA 502

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + +  EQGKQIH +  K     D    NS+V+MY KCG ID+A+ +FNE+  + +V+W+ 
Sbjct: 503 NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSA 562

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I G  +HG  ++A+ LF +ML + + P+ +  ++VLSAC+H+GLV E++ +F  +    
Sbjct: 563 MIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLF 622

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P  EHY+C+VD LGR GRLDEA  L++ MP + S A+W  LL A R+H ++ELGR  
Sbjct: 623 GITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHA 682

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E+LL L+ +    +++++NI+A  G W+   ++R+  ++  +KK  G SW+E+  +++ 
Sbjct: 683 AEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYT 742

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +HP +++I+  L ++ +R+    G+V  ++  LHD+++  KE+ L  HSEKLA+
Sbjct: 743 FIVGDRSHPRSKEIYVKLDDLRERLTSA-GYVPMIETDLHDVEQIEKEQLLWHHSEKLAV 801

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+       PG  IRV KNLRVC DCH   K +SK+     +VRD  RFH F  G C
Sbjct: 802 AFGLIA----TPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSC 857

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 858 SCGDYW 863



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 263/533 (49%), Gaps = 51/533 (9%)

Query: 54  IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA------------------- 94
           +++Y+KC     A  +     E ++VSW+AL+ G++QNG                     
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 95  -------KAC--------------LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
                  K C              ++L  +M S+ + PNEF+LST + A   L     GM
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++HG  +K G++ +P   N+++DMY+K G    A  +F  +P   +++WNA+IAG VL  
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            +D  L L  KM  +   P  FT +S LKAC ++G V  G Q+H  L+         + +
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK--MDMEPDSFV 326

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              L+D Y KCG L +AR VFDL+  K VI W+S+I GY+      EAM LF  + +  L
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + +   LS+++   A        +Q+H  + K     D  V+NS++D Y KC L+++A +
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F   P +++V +T +IT Y ++GL +EA+ ++ +M   D++PD   + ++ +AC++   
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            E+ ++    +     +       S +V+   + G +D+A  +   +  +  I  W  ++
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNS-LVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMI 564

Query: 494 SACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHA--DAGSWNECERL 542
                HG    GR+  ++  ++  +G  P +  ++S + A   AG   E  R 
Sbjct: 565 GGLAQHGH---GRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRF 614



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 212/391 (54%), Gaps = 10/391 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S+ +      L+ +L+ C+   L+  G QLH AL+KM    D  +   LIDMY+KCG + 
Sbjct: 282 SYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQ 341

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFD M  ++V+ W +++ G+   G     +SLF  M    ++ N+ TLST +K++ 
Sbjct: 342 DARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA 401

Query: 125 VLSSVENGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              S  NG   Q+H + +KSG++++  V NS++D Y KC  + +AA++F+V PA+ L+ +
Sbjct: 402 --GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAY 459

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            +MI  Y   G  ++ L ++ +MQ+    PD F F+S   AC +L +   G QIH  ++ 
Sbjct: 460 TSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLK 519

Query: 243 SGFPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            G    +  V AG SLV+ Y KCG + +A  +F+ I  + ++SWS++I G AQ  +  +A
Sbjct: 520 CGL---LSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKA 576

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IVD 360
           ++LF Q+ +  +  +   L S++       LV + ++      K+     T    + +VD
Sbjct: 577 LQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVD 636

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
           +  + G +DEA  L  EMP + +   W  ++
Sbjct: 637 ILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 85/476 (17%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V +GM IH   ++ G      + N ++++YSKC     A ++        L++W+A+I+G
Sbjct: 66  VSSGMAIHARIIRLGLL---GLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISG 122

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK-------------------------- 222
           YV  G  ++ LL + +M   G   +EFTF+S LK                          
Sbjct: 123 YVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIST 182

Query: 223 --------------ACGSLGSVGGGTQIHGFLITSGF---PYSVKTVIAGSLVDFYVKCG 265
                         AC  L     G ++HG+LI  G+   P+S     A +L+D Y K G
Sbjct: 183 GISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFS-----ANALLDMYAKSG 237

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           C   A  VF  I +  ++SW+++I G    E    A++L  ++    +    F LSS + 
Sbjct: 238 CPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALK 297

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A   LV+ G+Q+H+   K+    D+ V   ++DMY KCGL+ +A  +F+ MP K+V+ 
Sbjct: 298 ACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIV 357

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLV 434
           W  II+GY   G   EA+ LF  M  + +E +      +L + +           H+  +
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +   +Y   + N             ++DS G+   L++A  + E  P +  +A + ++++
Sbjct: 418 KSGYQYDGYVANS------------LLDSYGKCCLLEDAAKVFEVCPAEDLVA-YTSMIT 464

Query: 495 ACRVHGDLELGREVGEILLRL-DGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           A   +G   LG E  ++ LR+ D D   +  + S++      +N C  L    + K
Sbjct: 465 AYSQYG---LGEEALKMYLRMQDRDIKPDAFIFSSL------FNACANLSAYEQGK 511


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 394/676 (58%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  N  L  G ++HG L+   F+ ++     +++MYAKC +++ A  +FD+M ER++
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ GF QNG AK  L L  +M     +P+  TL T + A+  +  +  G  IHG 
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++GF     +  ++ DMYSKCG +  A  +FD M  K++++WN+M+ GYV  G  +K 
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F KM E G  P   T    L AC  LG +  G  +H F+        +   +  SL+
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS--VMNSLI 391

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F+ +  ++ +SW+++ILGYAQ   ++EA+  F +++   ++ D F
Sbjct: 392 SMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + S++   A+ ++    K IH    +     +  V+ ++VDMY KCG I  A +LF+ +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GYG HGL + A+ LF KM    VEP+ + YL+V+SACSHSGLV+E  
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  D  ++P ++HY  +VD LGRAGR+ EA + IE+MP+ P I ++  +L AC++
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKI 631

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G +  + L  L+ D    +V+++NI+A    W++   +RK    KGLKK  G S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H FY G  THP +++I+  L E+   +K   G+V      L D++++ +E+ 
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAA-GYVPDTNLIL-DVEDDVQEQL 749

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L    LN  PG  I V KNLRVCGDCH   K +S +     +VRD  
Sbjct: 750 LNSHSEKLAIAFGL----LNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 805

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G+CSCGDYW
Sbjct: 806 RFHHFKNGICSCGDYW 821



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 264/512 (51%), Gaps = 19/512 (3%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGV------QLHGALVKMGFSFDLMLNNDLIDMY 57
           + F  +SER  +   +      +LL+         Q+   ++K G   + +    L+ ++
Sbjct: 32  LPFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLF 91

Query: 58  AKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLS 117
           +K G +N A  VF+ + ++    +  ++ G+ +N + +  L+  C+M    VKP  +  +
Sbjct: 92  SKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFT 151

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
             +K  G  + ++ G +IHG  + + F  N      +++MY+KC +I++A +MFD MP +
Sbjct: 152 YLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER 211

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            L++WN +IAG+   G++ K L L  +MQ+ G+ PD  T  + L A   +G +  G  IH
Sbjct: 212 DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIH 271

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G+ I +GF   V   I+ +L D Y KCG +  AR +FD ++QK+V+SW+S++ GY Q   
Sbjct: 272 GYAIRAGFAKLVN--ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             +A+ +F ++ E  +   G  +   +   AD   +E+GK +H +  ++  G D SV NS
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS 389

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KC  +D A+++FN +  +  V+W  +I GY ++G   EA+  F +M    ++PD
Sbjct: 390 LISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPD 449

Query: 418 GVAYLAVLSACSHSGLVEESQEYFS---RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
               ++V+ A +   +   ++       R C DK     I   + +VD   + G +  A+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK----NIFVTTALVDMYSKCGAIHMAR 505

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            L + +  +  I  W  ++     HG   LGR
Sbjct: 506 KLFDMISDRHVIT-WNAMIDGYGTHG---LGR 533



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 142/268 (52%), Gaps = 4/268 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           + ++L  C+    L+ G  +H  + ++    D+ + N LI MY+KC  ++ A  +F+ + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R  VSW A++ G+ QNG     L+ F +M S  +KP+ FT+ + I A   LS   +   
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+ ++S  + N  V  +++DMYSKCG I+ A ++FD++  + +ITWNAMI GY   G 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               L LF KM++    P++ T+ S + AC   G V  G + H   +   +         
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHY 590

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           G++VD   + G + EA   +D IE   +
Sbjct: 591 GAMVDLLGRAGRIKEA---WDFIENMPI 615


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/702 (38%), Positives = 410/702 (58%), Gaps = 47/702 (6%)

Query: 31   GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            G +LHG LV+   + D++L + L+DMY+KCG +  A  VF  +LERN VS+ AL+ G++Q
Sbjct: 396  GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ 455

Query: 91   NGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G A+  L L+  M S   ++P++FT +T +       +   G QIH   +++    N +
Sbjct: 456  EGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 515

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            V   ++ MYS+CGR+N A  +F+ M  ++  +WN+MI GY   G + + L LF++MQ +G
Sbjct: 516  VETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 575

Query: 210  EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL-- 267
              PD F+ +S L +C SL     G ++H F++ +      + ++   LVD Y KCG +  
Sbjct: 576  IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM--EEEGILQVVLVDMYAKCGSMDY 633

Query: 268  -----------------------------VEARRVFDLIEQKSVISWSSLILGYAQEENL 298
                                          +A+ +FD +EQ++   W+S++ GYA +   
Sbjct: 634  AWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLK 693

Query: 299  AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SN 356
             E+   F ++ E  ++ D   + +++ + +    +E G Q+H+   K    ++ SV    
Sbjct: 694  KESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIK-KGFVNCSVVLET 752

Query: 357  SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            ++VDMY KCG I +A  +F+ M  KN+V+W  +I+GY KHG +KEA+ L+ +M    + P
Sbjct: 753  ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYP 812

Query: 417  DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
            + V +LA+LSACSH+GLVEE    F+ +  D  ++ + EHY+C+VD LGRAGRL++AK  
Sbjct: 813  NEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEF 872

Query: 477  IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
            +E MP++P ++ W  LL ACRVH D+++GR   + L  LD  NP  YV+MSNI+A AG W
Sbjct: 873  VEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRW 932

Query: 537  NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
             E E +R++ + KG+KK  G SW+E++ EI  F+ G  THP TE+I+  L  +  + K  
Sbjct: 933  KEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSK-G 991

Query: 597  LGFVYGVKYALH---DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLR 652
            LG++    + L    DI+EE +EE L  HSE+LA+ L L+       P K  IRVFKNLR
Sbjct: 992  LGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLI-----SLPKKSTIRVFKNLR 1046

Query: 653  VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +CGDCH   K +SKI     + RD  RFH FE G CSCGDYW
Sbjct: 1047 ICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 266/518 (51%), Gaps = 35/518 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +LR C      D G Q+H  L+  GF  D  + N LIDMYAKC +      VFD+M 
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG 338

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ERN V+W +++    Q G+    L LF +M  S  K N F L + + AS  L+ +  G +
Sbjct: 339 ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRE 398

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +++    + ++G++++DMYSKCG + EA ++F  +  ++ +++NA++AGYV  G 
Sbjct: 399 LHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGK 458

Query: 195 SDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +++ L L+  MQ E G  PD+FTFT+ L  C +  +   G QIH  LI +    ++  ++
Sbjct: 459 AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI--IV 516

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              LV  Y +CG L  A+ +F+ + +++  SW+S+I GY Q     EA+ LF+Q++   +
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 576

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID---- 369
           + D F LSSM+      +  ++G+++H +  +     +  +   +VDMY KCG +D    
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636

Query: 370 ---------------------------EATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
                                      +A  LF++M  +N   W  I+ GY   GL KE+
Sbjct: 637 VYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKES 696

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
              F +ML  D+E D +  + +++ CS    +E   +  S +     +   +   + +VD
Sbjct: 697 FNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVD 756

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + G + +A+ + ++M  K +I  W  ++S    HG
Sbjct: 757 MYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG 793



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 267/493 (54%), Gaps = 34/493 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QL  ++VK G + +L +   L+D YA+ G M+ A    D++   +VV+W A++ G+++  
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +    +F +M    V P+ FT ++ ++  G L S + G Q+H   +  GF+ +  VGN
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++IDMY+KC       ++FD M  ++ +TWN++I+     G+ +  L+LF +MQE G   
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           + F   S L A   L  +G G ++HG L+ +     +  ++  +LVD Y KCG + EA +
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI--ILGSALVDMYSKCGMVEEAHQ 433

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFA 331
           VF  + +++ +S+++L+ GY QE    EA+EL+  ++ E  +Q D F  ++++ + A+  
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
              QG+QIHA+  +     +  V   +V MY +CG ++ A E+FN M  +N  +W  +I 
Sbjct: 494 NDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIE 553

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEESQEY 440
           GY ++G  +EA+ LF++M L+ ++PD  +  ++LS+C            H+ +V  + E 
Sbjct: 554 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 613

Query: 441 -------------------FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
                              ++    D+ +K  +   + +V +   +GR ++AKNL + M 
Sbjct: 614 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME 673

Query: 482 VKPSIAIWQTLLS 494
            + + A+W ++L+
Sbjct: 674 QR-NTALWNSILA 685



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 254/477 (53%), Gaps = 8/477 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC---AVFDKMLERNVVSWTALMCG 87
           G  +H  ++  G++ D  L   ++ +YA+ G ++  C    +F++M ERN+ +W  ++  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + +  +    L L+ +M  S    ++FT  + IKA   +  +    Q+    +K+G   N
Sbjct: 150 YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN 209

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG +++D Y++ G +++A    D +   S++TWNA+IAGYV     ++   +F +M +
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK 269

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD FTF S L+ CG+L S  GG Q+H  LI  GF     T +  +L+D Y KC   
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF--KGDTFVGNALIDMYAKCDDE 327

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
               +VFD + +++ ++W+S+I   AQ  +  +A+ LF +++E   + + F L S++   
Sbjct: 328 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS 387

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A  A + +G+++H +  +     D  + +++VDMY KCG+++EA ++F  +  +N V++ 
Sbjct: 388 AGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYN 447

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
            ++ GY + G A+EA+ L+  M  +D ++PD   +  +L+ C++     + ++  + L  
Sbjct: 448 ALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 507

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
               K  I     +V      GRL+ AK +   M  + + + W +++   + +G+ +
Sbjct: 508 ANITKNIIVETE-LVHMYSECGRLNYAKEIFNRMAERNAYS-WNSMIEGYQQNGETQ 562



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 7/264 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +DY  +++   +K     D++LNN ++  +   G  N A  +FD+M +RN   W +++ G
Sbjct: 631 MDYAWKVYDQTIKK----DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAG 686

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF-EW 146
           +   G  K   + F +M  S ++ +  T+ T +     L ++E+G Q+H + +K GF   
Sbjct: 687 YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNC 746

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           + V+  +++DMYSKCG I +A  +FD M  K++++WNAMI+GY   G S + L+L+ +M 
Sbjct: 747 SVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 806

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           + G  P+E TF + L AC   G V  G +I   +    +    K      +VD   + G 
Sbjct: 807 KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM-QEDYNIEAKAEHYTCMVDLLGRAGR 865

Query: 267 LVEARRVFDLIE-QKSVISWSSLI 289
           L +A+   + +  +  V +W +L+
Sbjct: 866 LEDAKEFVEKMPIEPEVSTWGALL 889



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 4/208 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CS    L++G QLH  ++K GF +  ++L   L+DMY+KCG +  A  VFD M  +N+VS
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS 781

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH-GMC 139
           W A++ G+ ++G +K  L L+ +M    + PNE T    + A      VE G++I   M 
Sbjct: 782 WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQ 841

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI-TWNAMIAGYVLAGYSDKG 198
                E        ++D+  + GR+ +A    + MP +  + TW A++    +    D G
Sbjct: 842 EDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMG 901

Query: 199 LLLFRKMQE-HGEIPDEFTFTSTLKACG 225
            L  +++ E   + P  +   S + A  
Sbjct: 902 RLAAQRLFELDPQNPGPYVIMSNIYAAA 929



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE---A 371
           V+    SS++    D    ++GK IH          D  +   I+ +Y + G +D+   A
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            +LF EMP +N+  W  +I  Y +     E + L+ +M       D   + +V+ AC
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/669 (39%), Positives = 402/669 (60%), Gaps = 14/669 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   +K GF  D+ +   L+DMY K   +     VFD+M  +NVVSWT+L+ G+ Q
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L LF QM    +KPN FT +  +       +VE G+Q+H M +KSG +    V
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GNS+++MYSK   +++A  +FD M  ++ ++WN+MIAG+V  G   +   LF +M+  G 
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG--FPYSVKTVIAGSLVDFYVKCGCLV 268
              +  F + +K C ++  +    Q+H  +I +G  F  ++KT    +L+  Y KC  + 
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT----ALMVAYSKCSEID 346

Query: 269 EARRVFDLIEQ-KSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGV 326
           +A ++F ++   ++V+SW+++I GY Q      AM LF Q+R E  ++ + F  SS++  
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406

Query: 327 -FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A  A VEQGKQ H+ + K        VS+++V MY K G I+ A E+F     +++V+
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 466

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I+GY +HG  K+++ +F +M   ++E DG+ ++ V+SAC+H+GLV E Q YF  + 
Sbjct: 467 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 526

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  + P +EHYSC+VD   RAG L++A +LI  MP      IW+TLL+ACRVH +++LG
Sbjct: 527 KDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLG 586

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               E L+ L   +   YV++SNI+A AG+W E  ++RKL   K +KK AG SW+EV  +
Sbjct: 587 ELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNK 646

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
              F  GD +HP +++I+  L E+  R+K+  G+    KY LHD++EE KE  L  HSE+
Sbjct: 647 TFSFMAGDLSHPQSDRIYLKLEELSIRLKDA-GYYPDTKYVLHDVEEEHKEVILSQHSER 705

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI   L+       PG  I++ KNLRVCGDCH  IK +SKI     VVRD+ RFH F+G
Sbjct: 706 LAIAFGLIA----TPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 762 GSCSCGDYW 770



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 256/484 (52%), Gaps = 22/484 (4%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD+  ++ +     L+  F +N   K  L+LF  +  S    +  +LS  +K  G L  
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G Q+H  C+K GF  +  VG S++DMY K   + +  R+FD M  K++++W +++AG
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G +++ L LF +MQ  G  P+ FTF + L    + G+V  G Q+H  +I SG   +
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  S+V+ Y K   + +A+ VFD +E ++ +SW+S+I G+       EA ELF ++
Sbjct: 228 I--FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R   +++   + ++++ + A+   +   KQ+H    K  S  D ++  +++  Y KC  I
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 369 DEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLS 426
           D+A +LF  M  V+NVV+WT II+GY ++G    A+ LF +M  ++ VEP+   + +VL+
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLN 405

Query: 427 AC-SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMP 481
           AC + +  VE+ +++ S  C+   +K    +  C+  +L     + G ++ A N +    
Sbjct: 406 ACAAPTASVEQGKQFHS--CS---IKSGFSNALCVSSALVTMYAKRGNIESA-NEVFKRQ 459

Query: 482 VKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           V   +  W +++S    HG     L++  E+    L LDG   + ++ + +    AG  N
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG---ITFIGVISACTHAGLVN 516

Query: 538 ECER 541
           E +R
Sbjct: 517 EGQR 520



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 207/377 (54%), Gaps = 13/377 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           ++ GVQ+H  ++K G    + + N +++MY+K   ++ A AVFD M  RN VSW +++ G
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F+ NG       LF +M    VK  +   +T IK    +  +    Q+H   +K+G +++
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFD 328

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKM- 205
             +  +++  YSKC  I++A ++F +M   +++++W A+I+GYV  G +D+ + LF +M 
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 206 QEHGEIPDEFTFTSTLKACGS-LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           +E G  P+EFTF+S L AC +   SV  G Q H   I SGF  ++   ++ +LV  Y K 
Sbjct: 389 REEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNAL--CVSSALVTMYAKR 446

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G +  A  VF     + ++SW+S+I GYAQ     +++++F ++R ++L++DG     ++
Sbjct: 447 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 506

Query: 325 GVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
                  LV +G++      K    VP+    S    +VD+Y + G++++A +L N+MP 
Sbjct: 507 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC---MVDLYSRAGMLEKAMDLINKMPF 563

Query: 381 KNVVT-WTVIITGYGKH 396
               T W  ++     H
Sbjct: 564 PAGATIWRTLLAACRVH 580



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 140/270 (51%), Gaps = 11/270 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  ++ C+    + +  QLH  ++K G  FDL +   L+  Y+KC E++ A  +F  M 
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH 356

Query: 75  E-RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKA-SGVLSSVEN 131
             +NVVSWTA++ G++QNG     ++LFCQM     V+PNEFT S+ + A +   +SVE 
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQ 416

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q H   +KSGF     V ++++ MY+K G I  A  +F     + L++WN+MI+GY  
Sbjct: 417 GKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQ 476

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   K L +F +M+      D  TF   + AC   G V  G +    ++     Y +  
Sbjct: 477 HGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKD---YHIVP 533

Query: 252 VIA--GSLVDFYVKCGCLVEARRVFDLIEQ 279
            +     +VD Y + G L +A    DLI +
Sbjct: 534 TMEHYSCMVDLYSRAGMLEKA---MDLINK 560



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 4/171 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C +    ++ G Q H   +K GFS  L +++ L+ MYAK G +  A  VF + ++R++VS
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVS 466

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W +++ G+ Q+G  K  L +F +M S +++ +  T    I A      V  G +   + +
Sbjct: 467 WNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMV 526

Query: 141 KSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           K  +   P + +   ++D+YS+ G + +A  + + MP  +  T W  ++A 
Sbjct: 527 KD-YHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/676 (37%), Positives = 397/676 (58%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  N  L  G ++H  L+  GF+ ++     +++MYAKC  +  A  +FD+M ER++
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDL 241

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++ G+ QNG  K  L L  +M     +P+  T+ + + A   + S+  G  IHG 
Sbjct: 242 VCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGY 301

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M++GFE    V  +++DMYSKCG +  A  +FD M  K++++WN+MI GYV  G     
Sbjct: 302 SMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAA 361

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F+KM +        T    L AC  LG V  G  +H  L            +  SL+
Sbjct: 362 MEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLL--DQLELGSDVSVMNSLI 419

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F+ ++ K+++SW+++ILGYAQ   + EA++ F +++ ++++ D F
Sbjct: 420 SMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSF 479

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + S++   A+ +++ Q K IH    +     +  V+ ++VDMY KCG +  A +LF+ M
Sbjct: 480 TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMM 539

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V TW  +I GYG HGL K A+ LF KM  + ++P+ V +L VLSACSHSGLVEE  
Sbjct: 540 DERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGF 599

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +YF  +  D  ++P ++HY  +VD LGRA RL+EA + I+ MP++P+I+++  +L ACR+
Sbjct: 600 QYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRI 659

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG +    +  LD D+   +V+++NI+A A  W++  R+R     KG++K  G S
Sbjct: 660 HKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWS 719

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H FY G  +HP  +KI+  L  +  R+K   G++     ++HD+++  KE+ 
Sbjct: 720 VVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAA-GYMPDTN-SVHDVEDVVKEQL 777

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI  +L    LN  PG  I + KNLRVCGDCH   K +S + K   +VRD  
Sbjct: 778 LNSHSEKLAIAFSL----LNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMR 833

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 834 RFHHFKDGTCSCGDYW 849



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 251/481 (52%), Gaps = 13/481 (2%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           ++K G   + +    L+ ++ K G ++ A  VF  + ++    +  ++ G+ +N +    
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +S FC+M    V+P  +  +  +K  G  + +  G +IH   + +GF  N      +++M
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNM 219

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y+KC  + EA +MFD MP + L+ WN +I+GY   G+    L L  +MQE G+ PD  T 
Sbjct: 220 YAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITI 279

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S L A   +GS+  G  IHG+ + +GF   V   ++ +LVD Y KCG +  AR +FD +
Sbjct: 280 VSILPAVADVGSLRIGRSIHGYSMRAGFESFVN--VSTALVDMYSKCGSVGTARLIFDRM 337

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K+V+SW+S+I GY Q  +   AME+F+++ +  +++    +   +   AD   VEQG+
Sbjct: 338 TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
            +H    ++  G D SV NS++ MY KC  +D A E+F  +  K +V+W  +I GY ++G
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNG 457

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCNDKRMKPRI 454
              EA+  F KM L +++PD    ++V+ A +   ++ +++       R C DK     +
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDK----NV 513

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
              + +VD   + G +  A+ L + M  +  +  W  ++     HG   LG+   E+  +
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDMMDER-HVTTWNAMIDGYGTHG---LGKAALELFEK 569

Query: 515 L 515
           +
Sbjct: 570 M 570



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 205/409 (50%), Gaps = 9/409 (2%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S++   Q   + +K+G     +    ++ ++ K G ++EAAR+F  +  K    ++ M+
Sbjct: 88  TSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTML 147

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY      D  +  F +M+  G  P  + FT  LK CG    +  G +IH  LI +GF 
Sbjct: 148 KGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFA 207

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +V  +    +V+ Y KC  + EA ++FD + ++ ++ W+++I GYAQ      A+EL  
Sbjct: 208 SNVFAMTG--VVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVL 265

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +++E   + D   + S++   AD   +  G+ IH Y+ +       +VS ++VDMY KCG
Sbjct: 266 RMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCG 325

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +  A  +F+ M  K VV+W  +I GY ++G    A+ +F+KM+ + VE   V  +  L 
Sbjct: 326 SVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALH 385

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           AC+  G VE+ + +  +L +   +   +   + ++    +  R+D A  + E++  K ++
Sbjct: 386 ACADLGDVEQGR-FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK-TL 443

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDN--PVNYVMMSNIHADA 533
             W  ++     +G +    E  +   ++   N  P ++ M+S I A A
Sbjct: 444 VSWNAMILGYAQNGRIN---EAIDYFCKMQLQNIKPDSFTMVSVIPALA 489



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 8/267 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    ++ G  +H  L ++    D+ + N LI MY+KC  ++ A  +F+ +  + 
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT 442

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW A++ G+ QNG     +  FC+M   ++KP+ FT+ + I A   LS +     IHG
Sbjct: 443 LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHG 502

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +++  + N  V  +++DMY+KCG ++ A ++FD+M  + + TWNAMI GY   G    
Sbjct: 503 LVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKA 562

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            L LF KM++    P+E TF   L AC   G V  G Q  G +      Y ++  +   G
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKD---YGLEPAMDHYG 619

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSV 282
           ++VD   +   L EA   +D I++  +
Sbjct: 620 AMVDLLGRANRLNEA---WDFIQKMPI 643


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 394/676 (58%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G ++H  + ++G   ++ +   L+ MY KCG M  A  VF+ +  RNV
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ GF Q+G  +     F +M  S ++PN  T  + + A    S+++ G QIH  
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDR 432

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+G+  +  V  +++ MY+KCG + +A  +F+ +  ++++ WNAMI  YV     D  
Sbjct: 433 IIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F+ + + G  PD  TFTS L  C S  ++  G  +   +I +GF   +   I  +LV
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH--IRNALV 550

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             +V CG L+ A  +F+ + ++ ++SW+++I G+ Q      A + F+ ++E  ++ D  
Sbjct: 551 SMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQI 610

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             + ++   A    + +G+++HA   +     D  V   ++ MY KCG ID+A  +F+ +
Sbjct: 611 TFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNL 670

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KNV +WT +ITGY +HG  KEA+ LF +M  + V+PD + ++  LSAC+H+GL++E  
Sbjct: 671 PKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGL 730

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  D  ++PR+EHY C+VD  GRAG L EA   I  M VKP   +W  LL AC+V
Sbjct: 731 HHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQV 789

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D+EL  +V +  L LD ++   YV++SNI+A AG W E  ++RK+   +G+ K  G+S
Sbjct: 790 HLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQS 849

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD  +H F   D THP  E+IH  L  +   MK +LG+V   +Y LHD+++  KE +
Sbjct: 850 WIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMK-KLGYVPDTRYVLHDVEDSEKEHA 908

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L    L   P   I + KNLRVCGDCH   K +SKI K   + RD+ 
Sbjct: 909 LCHHSERLAIAYGL----LKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSN 964

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGD+W
Sbjct: 965 RFHHFKDGVCSCGDFW 980



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 136/497 (27%), Positives = 265/497 (53%), Gaps = 7/497 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    +D G +L   ++  G+  DL +   LI+M+ KCG ++ A  VF+ +  R++
Sbjct: 212 LNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDL 271

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++WT+++ G  ++   K   +LF  M    V+P++    + +KA     ++E G ++H  
Sbjct: 272 ITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHAR 331

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             + G +    VG +++ MY+KCG + +A  +F+++  +++++W AMIAG+   G  ++ 
Sbjct: 332 MKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEA 391

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
            L F KM E G  P+  TF S L AC    ++  G QIH  +I +G  Y     +  +L+
Sbjct: 392 FLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG--YITDDRVRTALL 449

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG L++AR VF+ I +++V++W+++I  Y Q E    A+  F+ L +  ++ D  
Sbjct: 450 SMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSS 509

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S++ V      +E GK + +   +     D  + N++V M++ CG +  A  LFN+M
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM 569

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P +++V+W  II G+ +HG  + A   F+ M    V+PD + +  +L+AC+    + E +
Sbjct: 570 PERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
              + L  +  +   +   + ++    + G +D+A  +  ++P K ++  W ++++    
Sbjct: 630 RLHA-LITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQ 687

Query: 499 HGDLELGREVGEILLRL 515
           HG    G+E  E+  ++
Sbjct: 688 HGR---GKEALELFCQM 701



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 275/543 (50%), Gaps = 7/543 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
            RQ  +  L+ C K+  L  G ++H  +       D+ + N LI MYAKCG  N A  +F
Sbjct: 103 HRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIF 162

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M +++V SW  L+ G++Q+   +    L  QM    VKP+++T    + A     +V+
Sbjct: 163 DEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD 222

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G ++  + + +G++ +  VG ++I+M+ KCG +++A ++F+ +P + LITW +MI G  
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                 +   LF+ M+E G  PD+  F S LKAC    ++  G ++H  +   G     +
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGL--DTE 340

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +  +L+  Y KCG + +A  VF+L++ ++V+SW+++I G+AQ   + EA   F ++ E
Sbjct: 341 IYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++ +     S++G  +  + ++QG+QIH    K     D  V  +++ MY KCG + +
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F  +  +NVV W  +IT Y +H     AV  F+ +L + ++PD   + ++L+ C  
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              +E  + +   L      +  +   + +V      G L  A NL   MP +  ++ W 
Sbjct: 521 PDALELGK-WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVS-WN 578

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERLRKLARS 548
           T+++    HG+ +   +  + +++  G  P  + +  + N  A   +  E  RL  L   
Sbjct: 579 TIIAGFVQHGENQFAFDYFK-MMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITE 637

Query: 549 KGL 551
             L
Sbjct: 638 AAL 640



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 250/498 (50%), Gaps = 26/498 (5%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +N     A +    + G     + +   + S  ++ +  T S+ ++      ++ +G +I
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H     S  + +  + N +I MY+KCG  N A ++FD MP K + +WN ++ GYV     
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++   L  +M + G  PD++TF   L AC    +V  G ++   ++ +G  +     +  
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAG--WDTDLFVGT 244

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L++ ++KCG + +A +VF+ + ++ +I+W+S+I G A+     +A  LF+ + E  +Q 
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATE 373
           D     S++        +EQGK++HA   +V  GLDT   V  +++ MY KCG +++A E
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEV--GLDTEIYVGTALLSMYTKCGSMEDALE 362

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +FN +  +NVV+WT +I G+ +HG  +EA   F KM+   +EP+ V ++++L ACS    
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422

Query: 434 VEESQEYFSRL-----CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +++ ++   R+       D R++      + ++    + G L +A+N+ E +  K ++  
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVR------TALLSMYAKCGSLMDARNVFERIS-KQNVVA 475

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  +++A   H   +      + LL+ +G  P +    S +       N C+    L   
Sbjct: 476 WNAMITAYVQHEKYDNAVATFQALLK-EGIKPDSSTFTSIL-------NVCKSPDALELG 527

Query: 549 KGLKKVAGRSWVEVDKEI 566
           K ++ +  R+  E D  I
Sbjct: 528 KWVQSLIIRAGFESDLHI 545


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/668 (38%), Positives = 394/668 (58%), Gaps = 8/668 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L+ G Q+HG  VK G   D+ + N L++MY+K G    A  VF+ M   +++SW +++  
Sbjct: 920  LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS 979

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEW 146
              Q+   +  ++LF  +    +KP+ FTL++ ++A S ++  +    QIH   +K+G   
Sbjct: 980  CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIA 1039

Query: 147  NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            +  V  ++ID+YSK G++ EA  +F       L  WNAM+ GY++     K L LF  + 
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099

Query: 207  EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            + GE  D+ T  +  KACG L  +  G QIH   I +GF   +   +   ++D Y+KCG 
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH--VNSGILDMYIKCGD 1157

Query: 267  LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            +V A  VF+ I     ++W+S+I G     N  +A+ ++ ++R+  +  D +  ++++  
Sbjct: 1158 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 1217

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             +    +EQG+Q+HA   K+    D  V  S+VDMY KCG I++A  LF +M V+N+  W
Sbjct: 1218 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 1277

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
              ++ G  +HG A+EAV LF+ M    +EPD V+++ +LSACSH+GL  E+ EY   + N
Sbjct: 1278 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 1337

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            D  ++P IEHYSC+VD+LGRAG + EA  +IE+MP K S +I + LL ACR+ GD+E G+
Sbjct: 1338 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGK 1397

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
             V   L  L+  +   YV++SNI+A A  W++    RK+ + K +KK  G SW++V   +
Sbjct: 1398 RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNML 1457

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F   D +HP  + I+  + EM K ++E+ G+V   ++ L D+++E KE SL  HSEKL
Sbjct: 1458 HLFVVDDRSHPQADIIYDKVEEMMKTIRED-GYVPDTEFVLLDVEDEEKERSLYYHSEKL 1516

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            AI   L+    +      IRV KNLRVCGDCH  IK +SK+ +   V+RDA RFH F  G
Sbjct: 1517 AIAYGLI----STPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDG 1572

Query: 687  VCSCGDYW 694
            VCSCGDYW
Sbjct: 1573 VCSCGDYW 1580



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 213/429 (49%), Gaps = 7/429 (1%)

Query: 77   NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +V  W   +   L  G+    +  F  M   ++  +  TL   + A      +E G Q+H
Sbjct: 868  DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927

Query: 137  GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            G+ +KSG + +  V NS+++MYSK G    A  +F+ M    LI+WN+MI+    +   +
Sbjct: 928  GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987

Query: 197  KGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + + LF  +   G  PD FT  S L+AC SL   +    QIH   + +G      + +A 
Sbjct: 988  ESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG--NIADSFVAT 1045

Query: 256  SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            +L+D Y K G + EA  +F   +   +  W++++ GY    +  +A+ELF  + +   + 
Sbjct: 1046 TLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS 1105

Query: 316  DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
            D   L++         L++QGKQIHA+A K     D  V++ I+DMY+KCG +  A  +F
Sbjct: 1106 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 1165

Query: 376  NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            N +   + V WT +I+G   +G   +A+ ++ +M    V PD   +  ++ A S    +E
Sbjct: 1166 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 1225

Query: 436  ESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + ++  + +   D    P +   + +VD   + G +++A  L + M V+ +IA+W  +L 
Sbjct: 1226 QGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLV 1282

Query: 495  ACRVHGDLE 503
                HG+ E
Sbjct: 1283 GLAQHGNAE 1291



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 165/294 (56%), Gaps = 11/294 (3%)

Query: 6    FSLV------SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
            FSL+      S++  LA + + C   +LLD G Q+H   +K GF  DL +N+ ++DMY K
Sbjct: 1095 FSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 1154

Query: 60   CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
            CG+M  A  VF+ +   + V+WT+++ G + NGN    L ++ +M  S V P+E+T +T 
Sbjct: 1155 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 1214

Query: 120  IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            IKAS  ++++E G Q+H   +K     +P VG S++DMY+KCG I +A R+F  M  +++
Sbjct: 1215 IKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 1274

Query: 180  ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
              WNAM+ G    G +++ + LF+ M+ HG  PD  +F   L AC   G     ++ + +
Sbjct: 1275 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT---SEAYEY 1331

Query: 240  LITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            L +    Y ++  I     LVD   + G + EA +V + +  K+  S +  +LG
Sbjct: 1332 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 231/483 (47%), Gaps = 49/483 (10%)

Query: 23   SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
            + NLLL  G   H  +V  G + D  L+N+L+ MY+KCG ++ A  VFD   ER++V+W 
Sbjct: 634  THNLLL--GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWN 691

Query: 83   ALMCGFL-----QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK---ASGVLSSVENGMQ 134
            A++  +       +GNA+  L LF  + +S       TL+  +K    SG L + E    
Sbjct: 692  AILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEG--- 748

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            +HG  +K G EW+  V  +++++YSKCGR+ +A  +FD M  + ++ WN M+ GYV  G 
Sbjct: 749  VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
              +   LF +    G  PDEF+    L     +    G      +L      Y+ K  ++
Sbjct: 809  EKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEG-----KWLADQVQAYAAKLSLS 863

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
                D             VF   ++ S   W+    G         A+E F  +   ++ 
Sbjct: 864  DDNPD-------------VFCWNKKLSECLWAGDNWG---------AIECFVNMNGLNID 901

Query: 315  VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEAT 372
             D   L  ++   A    +E GKQ+H  A K  SGLD+  SV+NS+V+MY K G    A 
Sbjct: 902  YDAVTLLVVLAAVAGTDDLELGKQVHGIAVK--SGLDSDVSVANSLVNMYSKMGCAYFAR 959

Query: 373  ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-- 430
            E+FN+M   ++++W  +I+   +  L +E+V LF  +L + ++PD     +VL ACS   
Sbjct: 960  EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLI 1019

Query: 431  SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
             GL    Q +   L         +   + ++D   ++G+++EA+ L ++      +A W 
Sbjct: 1020 DGLNISRQIHVHALKTGNIADSFVA--TTLIDVYSKSGKMEEAEFLFQNKD-DLDLACWN 1076

Query: 491  TLL 493
             ++
Sbjct: 1077 AMM 1079



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 223/495 (45%), Gaps = 34/495 (6%)

Query: 10   SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
            + R  LA  L+ C  +  L     +HG  +K+G  +D+ ++  L+++Y+KCG M  A  +
Sbjct: 725  TTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLL 784

Query: 70   FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
            FD M ER+VV W  ++ G++Q G  K    LF +   S ++P+EF++            +
Sbjct: 785  FDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQL----------I 834

Query: 130  ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             NG+        S   W+   G  + D          AA++        +  WN  ++  
Sbjct: 835  LNGV--------SEVNWDE--GKWLADQVQAY-----AAKLSLSDDNPDVFCWNKKLSEC 879

Query: 190  VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
            + AG +   +  F  M       D  T    L A      +  G Q+HG  + SG    V
Sbjct: 880  LWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDV 939

Query: 250  KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
               +A SLV+ Y K GC   AR VF+ ++   +ISW+S+I   AQ     E++ LF  L 
Sbjct: 940  S--VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLL 997

Query: 310  ERSLQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
               L+ D F L+S++   +  +L++     +QIH +A K  +  D+ V+ +++D+Y K G
Sbjct: 998  HEGLKPDHFTLASVLRACS--SLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSG 1055

Query: 367  LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             ++EA  LF      ++  W  ++ GY      K+A+ LF  +     + D +       
Sbjct: 1056 KMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAK 1115

Query: 427  ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            AC    L+++ ++  +           +   S I+D   + G +  A  +   +     +
Sbjct: 1116 ACGCLVLLDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV 1174

Query: 487  AIWQTLLSACRVHGD 501
            A W +++S C  +G+
Sbjct: 1175 A-WTSMISGCVDNGN 1188


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 401/676 (59%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  N  L  G ++HG+++  GFS++L     +++MYAKC ++N A  +FD+M ER++
Sbjct: 37  LKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDL 96

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++ G+ QNG AK  L L  +M     +P+  T+ + + A      +  GM +HG 
Sbjct: 97  VCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGY 156

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++GFE    V  +++DMYSKCG ++ A  +FD M  +++++WN+MI GYV +G ++  
Sbjct: 157 VLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGA 216

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +L+F+KM + G  P   T    L AC  LG +  G  +H  +        V   +  SL+
Sbjct: 217 MLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVS--VMNSLI 274

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F  +  K+++SW+++ILGYAQ   + EA+  F +++ R+++ D F
Sbjct: 275 SMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSF 334

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + S++   A+ ++  Q K IH    +     +  V  ++VDMY KCG I  A +LF+ M
Sbjct: 335 TMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GYG HGL K +V LF++M    ++P+ + +L  LSACSHSGLVEE  
Sbjct: 395 NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL 454

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  D  ++P ++HY  +VD LGRAGRL++A + I+ MP+KP I ++  +L AC++
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKI 514

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H +++LG +    + +L+ D+   +V+++NI+A A  W +  ++R +    GL+K  G S
Sbjct: 515 HKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCS 574

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H FY G  +HP ++KI+  L  +   ++   G+V     ++HD++++ K + 
Sbjct: 575 LVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAA-GYVPDTN-SIHDVEDDVKVQL 632

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L    LN   G  I + KNLRVCGDCH   K +S +     +VRD  
Sbjct: 633 LNTHSEKLAIAFGL----LNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 688

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGDYW
Sbjct: 689 RFHLFKDGVCSCGDYW 704



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 222/417 (53%), Gaps = 4/417 (0%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           ++ G+ ++ +  + LS F +M   SV+P  +  +  +K  G  S ++ G +IHG  + SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F WN      +++MY+KC +IN+A  MFD MP + L+ WN MI+GY   G++   L+L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M E G  PD  T  S L A      +  G  +HG+++ +GF   V   ++ +LVD Y K
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVN--VSTALVDMYSK 178

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG +  AR +FD ++ ++V+SW+S+I GY Q  +   AM +F+++ +  +Q     +   
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +   AD   +E+GK +H    ++    D SV NS++ MY KC  +D A ++F  +  K +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+W  +I GY ++G   EA+  F +M   +++PD    ++V+ A +   +  +++ +   
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAK-WIHG 357

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           L   + +   +   + +VD   + G +  A+ L + M  +  I  W  ++     HG
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVIT-WNAMIDGYGTHG 413



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 185/379 (48%), Gaps = 34/379 (8%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L+ G  +H  + ++    D+ + N LI MY+KC  ++ A  +F  +  + 
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW A++ G+ QNG     L+ FC+M S ++KP+ FT+ + I A   LS       IHG
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHG 357

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + ++   + N  V  +++DMY+KCG I+ A ++FD+M A+ +ITWNAMI GY   G    
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            + LF++M++    P++ TF   L AC   G V  G     F  +    Y ++  +   G
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL---CFFESMKKDYGIEPTMDHYG 474

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA---QEENLAE--AMELFRQLRE 310
           ++VD   + G L +A      +  K  I+    +LG     +  +L E  A E+F+   +
Sbjct: 475 AMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPD 534

Query: 311 ----RSLQVDGFVLSSMMGVFADF---------------ALVEQGKQIHAYAAKVPSGLD 351
                 L  + +  +SM G  A                 +LVE G ++H++     SG  
Sbjct: 535 DGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFY----SGTT 590

Query: 352 TSVSNSIVDMYLKCGLIDE 370
           +   +  +  YL+  L+DE
Sbjct: 591 SHPQSKKIYSYLET-LVDE 608


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/680 (38%), Positives = 390/680 (57%), Gaps = 7/680 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            +A  L  CS    L  G Q H   +K G S D++L   L+D+Y KC ++  A   F    
Sbjct: 375  VASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE 434

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              NVV W  ++  +    N      +F QM    ++PN+FT  + ++    L +V+ G Q
Sbjct: 435  TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K+GF++N  V + +IDMY+K G+++ A ++F  +  K +++W AMIAGY     
Sbjct: 495  IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
              + L LF++MQ+ G   D   F S + AC  + ++  G QIH     SG  YS    + 
Sbjct: 555  FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG--YSDDLSVG 612

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +LV  Y +CG + +A   FD I  K  ISW+SLI G+AQ  +  EA+ LF Q+ +   +
Sbjct: 613  NALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQE 672

Query: 315  VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            ++ F     +   A+ A V+ GKQIHA   K     +T VSN ++ +Y KCG ID+A   
Sbjct: 673  INSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQ 732

Query: 375  FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
            F EMP KN ++W  ++TGY +HG   +A+ LF  M    V P+ V ++ VLSACSH GLV
Sbjct: 733  FFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLV 792

Query: 435  EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +E  +YF  +     + P+ EHY+C+VD LGR+G L  A+  +E MP++P   + +TLLS
Sbjct: 793  DEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852

Query: 495  ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            AC VH ++++G      LL L+  +   YV++SN++A  G W   +R R++ + +G+KK 
Sbjct: 853  ACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKE 912

Query: 555  AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
             GRSW+EV+  +H F+ GD  HP  +KI++ L ++ + +  E G++      L+D +   
Sbjct: 913  PGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNE-LAAENGYIPQTNSLLNDAERRQ 971

Query: 615  KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
            K  +  +HSEKLAI   L    L+      I VFKNLRVCGDCH +IK +SKI   V VV
Sbjct: 972  KGPTQIIHSEKLAIAFGL----LSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVV 1027

Query: 675  RDATRFHRFEGGVCSCGDYW 694
            RD+ RFH F+GG+CSC DYW
Sbjct: 1028 RDSYRFHHFKGGICSCKDYW 1047



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 252/471 (53%), Gaps = 4/471 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   +  G+   L + N LID+Y K G +N A  VFD + +R+ VSW A++ G  Q+G
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + LFCQM +S V P  +  S+ + A   +   + G Q+HG+ +K GF     V N
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCN 310

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++ +YS+ G    A ++F+ M  +  +++N++I+G    GYSDK L LF+KM      P
Sbjct: 311 ALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKP 370

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L AC S+G++  G Q H + I +G   S   ++ G+L+D YVKC  +  A  
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGM--SSDIILEGALLDLYVKCSDIKTAHE 428

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F   E ++V+ W+ +++ Y   +NL E+ ++F Q++   ++ + F   S++   +    
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           V+ G+QIH    K     +  VS+ ++DMY K G +D A ++F  +  K+VV+WT +I G
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y +H    EA+ LF++M    +  D + + + +SAC+    + + Q+  ++ C       
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG-YSD 607

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +   + +V    R G++ +A    + +  K +I+ W +L+S     G  E
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNIS-WNSLISGFAQSGHCE 657



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 259/482 (53%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K      G QLHG ++K GFS +  + N L+ +Y++ G    A  VF+ ML+R+ 
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+ +L+ G  Q G +   L LF +M    +KP+  T+++ + A   + ++  G Q H  
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSY 397

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+G   + ++  +++D+Y KC  I  A   F     ++++ WN M+  Y L    ++ 
Sbjct: 398 AIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNES 457

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F +MQ  G  P++FT+ S L+ C SL +V  G QIH  ++ +GF ++V   ++  L+
Sbjct: 458 FKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV--YVSSVLI 515

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A ++F  +++K V+SW+++I GYAQ E  AEA+ LF++++++ +  D  
Sbjct: 516 DMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNI 575

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S +   A    + QG+QIHA A       D SV N++V +Y +CG + +A   F+++
Sbjct: 576 GFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI 635

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ ++W  +I+G+ + G  +EA+ LF +M     E +   +   +SA ++   V+  +
Sbjct: 636 FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGK 695

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  + +          E  + ++    + G +D+A+     MP K  I+ W  +L+    
Sbjct: 696 QIHAMIIKTGH-DSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQ 753

Query: 499 HG 500
           HG
Sbjct: 754 HG 755



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 252/483 (52%), Gaps = 12/483 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C S     D G +LHG ++KMGF  +++L   L+D+Y   G+++GA  VFD+M  R +  
Sbjct: 78  CLSSGWFSD-GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSC 136

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG----VLSSVENGMQIH 136
           W  ++  F+    A   L LF +M    VKP+E T +  ++  G        VE   +IH
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE---KIH 193

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +  G+E +  V N +ID+Y K G +N A ++FD +  +  ++W AM++G   +G  +
Sbjct: 194 ARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEE 253

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + +LLF +M   G  P  + F+S L AC  +     G Q+HG ++  GF  S++T +  +
Sbjct: 254 EAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF--SLETYVCNA 311

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LV  Y + G  + A +VF+ + Q+  +S++SLI G +Q+    +A+ELF+++    L+ D
Sbjct: 312 LVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              ++S++   +    +  GKQ H+YA K     D  +  +++D+Y+KC  I  A E F 
Sbjct: 372 CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFL 431

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
               +NVV W V++  YG      E+  +F +M ++ +EP+   Y ++L  CS    V+ 
Sbjct: 432 STETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDL 491

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++  +++      +  +   S ++D   + G+LD A  +   +  K  ++ W  +++  
Sbjct: 492 GEQIHTQVLKTG-FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS-WTAMIAGY 549

Query: 497 RVH 499
             H
Sbjct: 550 AQH 552



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 191/381 (50%), Gaps = 21/381 (5%)

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS- 128
           F K LE N    TAL   +  +      ++    M    V+ N  T    +   G LSS 
Sbjct: 29  FQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLL--DGCLSSG 82

Query: 129 -VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
              +G ++HG  +K GF    V+   ++D+Y   G ++ A  +FD MP + L  WN ++ 
Sbjct: 83  WFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLH 142

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT------QIHGFLI 241
            +V    + + L LFR+M +    PDE T+   L+ CG     GG        +IH   I
Sbjct: 143 RFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG-----GGDVPFHCVEKIHARTI 197

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
           T G+  S+   +   L+D Y K G L  A++VFD ++++  +SW +++ G +Q     EA
Sbjct: 198 THGYENSL--FVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEA 255

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LF Q+    +    ++ SS++         + G+Q+H    K    L+T V N++V +
Sbjct: 256 VLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTL 315

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y + G    A ++FN M  ++ V++  +I+G  + G + +A+ LF+KM LD ++PD V  
Sbjct: 316 YSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTV 375

Query: 422 LAVLSACSHSGLVEESQEYFS 442
            ++LSACS  G +   +++ S
Sbjct: 376 ASLLSACSSVGALLVGKQFHS 396


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 392/676 (57%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  N  L  G ++HG L+   F+ ++     +++MYAKC +++ A  +FD+M ER++
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDL 213

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ GF QNG AK  L L  +M     +P+  TL T + A+  +  +  G  IHG 
Sbjct: 214 VSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGY 273

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++GF     +  ++ DMYSKCG +  A  +FD M  K++++WN+M+ GYV  G  +K 
Sbjct: 274 AIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F KM E G  P   T    L AC  LG +  G  +H F+        +   +  SL+
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDIS--VMNSLI 391

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F+ +  ++ +SW+++ILGYAQ   ++EA+  F +++   ++ D F
Sbjct: 392 SMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + S++   A+ ++    K IH    +     +  V+ ++VDMY KCG I  A +LF+ +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GYG HGL + A+ LF KM    VEP+ + YL+V+SACSHSGLV+E  
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  D  ++P ++HY  +VD LGRAGR+ EA + IE+MP+ P I ++     AC++
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKI 631

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G +  + L  L+ D    +V+++NI+A    W++   +RK    KGLKK  G S
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H FY G  THP +++I+  L E+   +K   G+V      L D++++ +E+ 
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAA-GYVPDTNLIL-DVEDDVQEQL 749

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L    LN  PG  I V KNLRVCGDCH   K +S +     +VRD  
Sbjct: 750 LNSHSEKLAIAFGL----LNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQ 805

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G+CSCGDYW
Sbjct: 806 RFHHFKNGICSCGDYW 821



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 263/512 (51%), Gaps = 19/512 (3%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGV------QLHGALVKMGFSFDLMLNNDLIDMY 57
           + F  +SER  +   +      +LL+         Q+   ++K G   + +    L+ ++
Sbjct: 32  LPFHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLF 91

Query: 58  AKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLS 117
           +K G +N A  VF+ + ++    +  ++ G+ +N + +  L+  C+M    VKP  +  +
Sbjct: 92  SKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFT 151

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
             +K  G  + ++ G +IHG  + + F  N      +++MY+KC +I++A +MFD MP +
Sbjct: 152 YLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER 211

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            L++WN +IAG+   G++ K L L  +MQ+ G+ PD  T  + L A   +G +  G  IH
Sbjct: 212 DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIH 271

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G+ I +GF   V   I+ +L D Y KCG +  AR +FD ++QK+V+SW+S++ GY Q   
Sbjct: 272 GYAIRAGFAKLVN--ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGE 329

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             +A+ +F ++ E  +   G  +   +   AD   +E+GK +H +  ++  G D SV NS
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNS 389

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KC  +D A+++FN +  +  V+W  +I GY ++G   EA+  F +M    ++PD
Sbjct: 390 LISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPD 449

Query: 418 GVAYLAVLSACSHSGLVEESQEYFS---RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
               ++V+ A +   +   ++       R C DK     I   + +VD   + G +  A+
Sbjct: 450 SFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK----NIFVTTALVDMYSKCGAIHMAR 505

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            L + M     +  W  ++     HG   LGR
Sbjct: 506 KLFD-MISDRHVITWNAMIDGYGTHG---LGR 533



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 142/268 (52%), Gaps = 4/268 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           + ++L  C+    L+ G  +H  + ++    D+ + N LI MY+KC  ++ A  +F+ + 
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLN 411

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R  VSW A++ G+ QNG     L+ F +M S  +KP+ FT+ + I A   LS   +   
Sbjct: 412 GRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+ ++S  + N  V  +++DMYSKCG I+ A ++FD++  + +ITWNAMI GY   G 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               L LF KM++    P++ T+ S + AC   G V  G + H   +   +         
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHY 590

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           G++VD   + G + EA   +D IE   +
Sbjct: 591 GAMVDLLGRAGRIKEA---WDFIENMPI 615


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/633 (39%), Positives = 390/633 (61%), Gaps = 11/633 (1%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFDKM ERN+V+WT ++  F Q G A+  + LF  M  S   P+ FT S+ + A   
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITW 182
           L  +  G Q+H   ++ G   +  VG S++DMY+KC   G ++++ ++F+ MP  ++++W
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 183 NAMIAGYVLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
            A+I  Y  +G  DK  + LF KM      P+ F+F+S LKACG+L     G Q++ + +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G   SV  V   SL+  Y + G + +AR+ FD++ +K+++S+++++ GYA+     EA
Sbjct: 184 KLGIA-SVNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             LF ++ +  + +  F  +S++   A    + +G+QIH    K     +  + N+++ M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y +CG I+ A ++FNEM  +NV++WT +ITG+ KHG A  A+ +F KML    +P+ + Y
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           +AVLSACSH G++ E Q++F+ +  +  + PR+EHY+C+VD LGR+G L EA   I SMP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           +     +W+TLL ACRVHG+ ELGR   E++L  + D+P  Y+++SN+HA AG W +  +
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +RK  + + L K AG SW+EV+  +H F+ G+ +HP   +I+Q L ++  ++K E+G++ 
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK-EMGYIP 540

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
              + LHDI+EE KE+ L  HSEK+A+   L+    +    K IR+FKNLRVCGDCH  I
Sbjct: 541 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLI----STSQSKPIRIFKNLRVCGDCHTAI 596

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +S       VVRD+ RFH  + GVCSC DYW
Sbjct: 597 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 234/425 (55%), Gaps = 12/425 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNG 65
           V +R   +  L  C++  LL  G QLH  ++++G + D+ +   L+DMYAKC   G ++ 
Sbjct: 48  VPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDD 107

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           +  VF++M E NV+SWTA++  + Q+G   K  + LFC+M S  ++PN F+ S+ +KA G
Sbjct: 108 SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 167

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS    G Q++   +K G      VGNS+I MY++ GR+ +A + FD++  K+L+++NA
Sbjct: 168 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 227

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GY     S++  LLF ++ + G     FTF S L    S+G++G G QIHG L+  G
Sbjct: 228 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 287

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             Y     I  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+      A+E+
Sbjct: 288 --YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 345

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++ E   + +     +++   +   ++ +G Q H  +     G+   + +   +VD+ 
Sbjct: 346 FHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLL 404

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            + GL+ EA E  N MP+  + + W  ++     HG     +G     ++ + EPD  A 
Sbjct: 405 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAEMILEQEPDDPAA 462

Query: 422 LAVLS 426
             +LS
Sbjct: 463 YILLS 467



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 13/290 (4%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDY-GVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           N  SFS V         L+ C  NL   Y G Q++   VK+G +    + N LI MYA+ 
Sbjct: 155 NHFSFSSV---------LKACG-NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 204

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A   FD + E+N+VS+ A++ G+ +N  ++    LF ++  + +  + FT ++ +
Sbjct: 205 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 264

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
             +  + ++  G QIHG  +K G++ N  + N++I MYS+CG I  A ++F+ M  +++I
Sbjct: 265 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 324

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W +MI G+   G++ + L +F KM E G  P+E T+ + L AC  +G +  G Q H   
Sbjct: 325 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNS 383

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           +        +      +VD   + G LVEA    + +      + W +L+
Sbjct: 384 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/677 (37%), Positives = 408/677 (60%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+C +    ++ G Q+HG + K+GF+    + N LI  Y    ++  A  +FD++ +R+V
Sbjct: 258 LKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDV 317

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++ G+++NG     + +F +M    V  +  T+     A   + ++  G  +H  
Sbjct: 318 ISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSY 377

Query: 139 CMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
            +K+   +      N+++DMYSKCG +N A R+F+ M  K++++W +MI GYV  G SD 
Sbjct: 378 SIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDG 437

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + LF +M+  G +PD +  TS L AC   G++  G  +H ++  +       + ++ +L
Sbjct: 438 AIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNL--ETNSFVSNAL 495

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
            D Y KCG + +A  VF  +++K VISW+++I GY +     EA+ LF ++ +R  + DG
Sbjct: 496 TDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDG 554

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             ++ ++   A  A +++G++IH YA +     D  V+N++VDMY+KCGL+  A  LF+ 
Sbjct: 555 TTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDM 614

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P K++V+WTV+I GYG HG   EA+  F +M +  +EPD V+++++L ACSHSGL++E 
Sbjct: 615 IPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEG 674

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            + F+ +  + +++P +EHY+C+VD L R G L +A   I++MP+KP   IW  LL  CR
Sbjct: 675 WKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCR 734

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H D++L  +V E +  L+ +N   YV+++NI+A+A  W E ++LRK    +GLKK  G 
Sbjct: 735 IHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGC 794

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+E+  +I+ F  GD + P  +KI  +L  +  +MKEE G+     YAL +  E  KE 
Sbjct: 795 SWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEE-GYSPKTAYALLNADEREKEV 853

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L  HSEKLA+      G LN  PGK IRV KNLRVCGDCHE  K +SK      ++RD+
Sbjct: 854 ALCGHSEKLAMAF----GMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDS 909

Query: 678 TRFHRFEGGVCSCGDYW 694
           +RFH F+ G CSC  YW
Sbjct: 910 SRFHHFKDGSCSCRGYW 926



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 272/515 (52%), Gaps = 9/515 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   +  G ++   +   G   D +L   L+ MY KCG++     VFDK+ E  +
Sbjct: 157 LQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKI 216

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  ++  +  +GN    ++LF QM    +KPN +T S+ +K    ++ VE G Q+HG+
Sbjct: 217 FLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGL 276

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K GF     V NS+I  Y    ++  A ++FD +  + +I+WN+MI+GYV  G  D+G
Sbjct: 277 ICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRG 336

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F KM   G   D  T  +   AC ++G++  G  +H + I +      +     +L+
Sbjct: 337 IEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA-TLDREVRFNNTLL 395

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L  A RVF+ +++K+V+SW+S+I GY +E     A++LF +++ R +  D +
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A    ++ GK +H Y  +     ++ VSN++ DMY KCG + +A ++F+ M
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V++W  +I GY K+ L  EA+ LF +M  +  +PDG     +L AC+    +++ +
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGR 574

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E       +   + +    + +VD   + G L  A++L + +P K  ++ W  +++   +
Sbjct: 575 EIHGYALRNGYSEDKYVT-NAVVDMYVKCGLLVLARSLFDMIPNKDLVS-WTVMIAGYGM 632

Query: 499 HGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHA 531
           HG    G E       +R+ G  P     +S ++A
Sbjct: 633 HG---YGSEAINTFNQMRMTGIEPDEVSFISILYA 664



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 108/229 (47%), Gaps = 16/229 (6%)

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S  I+ + +  +L  AMEL    +  +  +  +   S++ + A+   +  G+++ +    
Sbjct: 121 SRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRSIIES 178

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               +D  +   +V MY+KCG + E   +F+++    +  W ++I+ Y   G   E++ L
Sbjct: 179 SGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINL 238

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL- 464
           F++ML   ++P+   + ++L   +    VEE ++    +C     K     Y+ +V+SL 
Sbjct: 239 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLIC-----KLGFNSYNTVVNSLI 293

Query: 465 -----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                GR  R   A+ L + +  +  I+ W +++S    +G  + G E+
Sbjct: 294 SFYFVGRKVRC--AQKLFDELTDRDVIS-WNSMISGYVKNGLDDRGIEI 339


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/671 (38%), Positives = 397/671 (59%), Gaps = 14/671 (2%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L+ G Q+HG +++ G    + + N LI+MY K G ++ A +VF +M E +++SW  ++ G
Sbjct: 951  LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG----MQIHGMCMKSG 143
               +G  +  + +F  +   S+ P++FT+++ ++A    SS+E G     QIH   MK+G
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRA---CSSLEGGYYLATQIHACAMKAG 1067

Query: 144  FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
               +  V  ++ID+YSK G++ EA  +F       L +WNA++ GY+++G   K L L+ 
Sbjct: 1068 VVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYI 1127

Query: 204  KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
             MQE GE  D+ T  +  KA G L  +  G QIH  ++  GF  ++   +   ++D Y+K
Sbjct: 1128 LMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGF--NLDLFVTSGVLDMYLK 1185

Query: 264  CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            CG +  ARRVF  I     ++W+++I G  +      A+  + Q+R   +Q D +  +++
Sbjct: 1186 CGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATL 1245

Query: 324  MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
            +   +    +EQG+QIHA   K+    D  V  S+VDMY KCG I++A  LF     + +
Sbjct: 1246 VKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRI 1305

Query: 384  VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
             +W  +I G  +HG AKEA+  F+ M    V PD V ++ VLSACSHSGLV E+ E F  
Sbjct: 1306 ASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYS 1365

Query: 444  LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +  +  ++P IEHYSC+VD+L RAGR++EA+ +I SMP + S ++++TLL+ACRV  D E
Sbjct: 1366 MQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRE 1425

Query: 504  LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
             G+ V E LL L+  +   YV++SN++A A  W      R + R   +KK  G SWV++ 
Sbjct: 1426 TGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLK 1485

Query: 564  KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
             ++H F  GD +H  T+ I+  +  + KR++EE G+V    +AL D++EE KE SL  HS
Sbjct: 1486 NKVHLFVAGDRSHEETDVIYNKVEYIMKRIREE-GYVPDTDFALVDVEEEDKECSLYYHS 1544

Query: 624  EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
            EKLAI   L++      P   +RV KNLRVCGDCH  IK +SK+ K   V+RDA RFH F
Sbjct: 1545 EKLAIAYGLMK----TPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHF 1600

Query: 684  EGGVCSCGDYW 694
              G+CSCGDYW
Sbjct: 1601 RNGICSCGDYW 1611



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 220/427 (51%), Gaps = 7/427 (1%)

Query: 77   NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +V+ W   +  FLQ G A   +  F  M +S V  +  T    +     L+ +E G QIH
Sbjct: 899  DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958

Query: 137  GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            G+ M+SG +    VGN +I+MY K G ++ A  +F  M    LI+WN MI+G  L+G  +
Sbjct: 959  GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018

Query: 197  KGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              + +F  +     +PD+FT  S L+AC SL G     TQIH   + +G    + + ++ 
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGV--VLDSFVST 1076

Query: 256  SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            +L+D Y K G + EA  +F   +   + SW++++ GY    +  +A+ L+  ++E   + 
Sbjct: 1077 ALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERS 1136

Query: 316  DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
            D   L +          ++QGKQIHA   K    LD  V++ ++DMYLKCG ++ A  +F
Sbjct: 1137 DQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVF 1196

Query: 376  NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            +E+P  + V WT +I+G  ++G  + A+  + +M L  V+PD   +  ++ ACS    +E
Sbjct: 1197 SEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALE 1256

Query: 436  ESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + ++  + +   +    P +   + +VD   + G +++A+ L +    +  IA W  ++ 
Sbjct: 1257 QGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTR-RIASWNAMIV 1313

Query: 495  ACRVHGD 501
                HG+
Sbjct: 1314 GLAQHGN 1320



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 215/485 (44%), Gaps = 47/485 (9%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALM 85
            L  G + H  ++  G   D  + N+LI MYAKCG ++ A  +FD   +  R++V+W A++
Sbjct: 672  LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731

Query: 86   CGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
                 + + +     LF  +  S V     TL+   K   + +S      +HG  +K G 
Sbjct: 732  SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791

Query: 145  EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
            +W+  V  +++++Y+K G I EA  +FD M  + ++ WN M+  YV      + +LLF +
Sbjct: 792  QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851

Query: 205  MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
                G  PD+ T  +  +      ++    Q   +                         
Sbjct: 852  FHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAY------------------------- 886

Query: 265  GCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
                 A ++F   +  S VI W+  +  + Q     EA++ F  +    +  DG     M
Sbjct: 887  -----ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVM 941

Query: 324  MGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
            + V A    +E GKQIH    +  SGLD   SV N +++MY+K G +  A  +F +M   
Sbjct: 942  LTVVAGLNCLELGKQIHGIVMR--SGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV 999

Query: 382  NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
            ++++W  +I+G    GL + +VG+F  +L D + PD     +VL ACS      E   Y 
Sbjct: 1000 DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYL 1055

Query: 442  SRLCNDKRMKPRIEHYS----CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            +   +   MK  +   S     ++D   + G+++EA+ L  +      +A W  ++    
Sbjct: 1056 ATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQD-GFDLASWNAIMHGYI 1114

Query: 498  VHGDL 502
            V GD 
Sbjct: 1115 VSGDF 1119



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 214/500 (42%), Gaps = 42/500 (8%)

Query: 10   SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
            + R  LA   + C  +        LHG  VK+G  +D+ +   L+++YAK G +  A  +
Sbjct: 758  TTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVL 817

Query: 70   FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
            FD M  R+VV W  +M  ++        + LF +   +  +P++ TL T       LS V
Sbjct: 818  FDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRT-------LSRV 870

Query: 130  ENGMQIHGMCMKSGFEWNPVVGNSI-IDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
                     C K+  E       +  + MY   G                +I WN  ++ 
Sbjct: 871  VK-------CKKNILELKQFKAYATKLFMYDDDG--------------SDVIVWNKALSR 909

Query: 189  YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
            ++  G + + +  F  M       D  TF   L     L  +  G QIHG ++ SG    
Sbjct: 910  FLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQV 969

Query: 249  VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            V   +   L++ YVK G +  AR VF  + +  +ISW+++I G         ++ +F  L
Sbjct: 970  VS--VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHL 1027

Query: 309  RERSLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
               SL  D F ++S++   +    +E G     QIHA A K    LD+ VS +++D+Y K
Sbjct: 1028 LRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK 1084

Query: 365  CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             G ++EA  LF      ++ +W  I+ GY   G   +A+ L+  M       D +    V
Sbjct: 1085 RGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITL--V 1142

Query: 425  LSACSHSGLVEESQ-EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
             +A +  GLV   Q +    +   +     +   S ++D   + G ++ A+ +   +P  
Sbjct: 1143 NAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-S 1201

Query: 484  PSIAIWQTLLSACRVHGDLE 503
            P    W T++S C  +G  E
Sbjct: 1202 PDDVAWTTMISGCVENGQEE 1221



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 5/204 (2%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S L+   +   +  G + H  ++TSG  +     +  +L+  Y KCG L  AR++FD   
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSG--HHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718

Query: 279 --QKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
              + +++W++++   A   + + +   LFR LR   +      L+ +  +    A    
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
            + +H YA K+    D  V+ ++V++Y K GLI EA  LF+ M V++VV W V++  Y  
Sbjct: 779 SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGV 419
             L  EA+ LF +       PD V
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPDDV 862


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/680 (36%), Positives = 399/680 (58%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    L  G QLH  L+K G SFD +    L+D+Y KCG++  A  +F+   
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             NVV W  ++  + Q  +      +F QM ++ + PN+FT    ++       +E G Q
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQ 367

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+GFE +  V   +IDMYSK   +++A ++ +++  + +++W +MIAGYV   +
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L  F++MQ+ G  PD     S   AC  + ++  G QIH  +  SG  Y+    I 
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG--YAADISIW 485

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV+ Y +CG   EA  +F  I+ K  I+W+ LI G+ Q     +A+ +F ++ +   +
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAK 545

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F   S +   A+ A ++QGKQ+H  A K     +T V+N+++ +Y KCG I++A  +
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMI 605

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+EM ++N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLV
Sbjct: 606 FSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE   YF  + N   + P  +HY+C+VD LGRAG+LD A+  ++ MP+  +  IW+TLLS
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC+VH ++E+G    + LL L+  +  +YV++SN +A  G W   +++RK+ + +G++K 
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSW+EV   +H F+ GD  HPL+++I++ L E+  R+  ++G+        H+ ++E 
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL-SKIGYKQENPNLFHEKEQEQ 844

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ +  VHSEKLA+   L    +   P   +RV KNLRVC DCH ++K  S++ +   V+
Sbjct: 845 KDPTAFVHSEKLAVAFGL----MTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVL 900

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F  G CSCGDYW
Sbjct: 901 RDVYRFHHFNSGSCSCGDYW 920



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 256/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H  + K  F  +  + N LI +Y   G    A  VF  ML
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V++  L+ G  Q G+ +  L +F +M  S ++P+  T+++ + A   +  ++ G Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G  ++ +   S++D+Y KCG I  A  +F++    +++ WN M+  Y     
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   +F +MQ  G  P++FT+   L+ C   G +  G QIH   I +GF   +   ++
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM--YVS 384

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K  CL +AR++ +++E++ V+SW+S+I GY Q +   EA+  F+++++  + 
Sbjct: 385 GVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S     A    + QG QIHA         D S+ N++V++Y +CG  +EA  L
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E+  K+ +TW  +I+G+G+  L ++A+ +F KM     + +   +++ +SA ++   +
Sbjct: 505 FREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADI 564

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++   R           E  + ++   G+ G +++AK +   M ++  ++ W T+++
Sbjct: 565 KQGKQVHGRAVKTGHTS-ETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIIT 622

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 623 SCSQHG 628



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 239/468 (51%), Gaps = 14/468 (2%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +++H   V  G   D ++ N LID+YAK G +  A  VF ++  R+ VSW A++ G+ Q 
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  K    L+ QM  ++V P  + LS+ + A         G  IH    K  F     VG
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++I +Y   G    A R+F  M     +T+N +I+G+   G+ +  L +F +MQ  G  
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD  T  S L AC S+G +  G Q+H +L+ +G  +    +  GSL+D YVKCG +  A 
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDY--ITEGSLLDLYVKCGDIETAH 300

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F+L ++ +V+ W+ +++ Y Q  +LA++ E+F Q++   +  + F    ++       
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E G+QIH+ + K     D  VS  ++DMY K   +D+A ++   +  ++VV+WT +I 
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVEESQEYFSRLCN 446
           GY +H   +EA+  F++M    V PD +   +  SAC+       GL   ++ Y S    
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA 480

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           D      I  ++ +V+   R GR +EA +L   +  K  I  W  L+S
Sbjct: 481 D------ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEIT-WNGLIS 521


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/633 (39%), Positives = 390/633 (61%), Gaps = 11/633 (1%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFDKM ERN+V+WT ++  F Q G A+  + LF  M  S   P+ FT S+ + A   
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITW 182
           L  +  G Q+H   ++ G   +  VG S++DMY+KC   G ++++ ++F+ MP  ++++W
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 183 NAMIAGYVLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
            A+I  Y  +G  DK  + LF KM      P+ F+F+S LKACG+L     G Q++ + +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G   SV  V   SL+  Y + G + +AR+ FD++ +K+++S+++++ GYA+     EA
Sbjct: 189 KLGIA-SVNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             LF ++ +  + +  F  +S++   A    + +G+QIH    K     +  + N+++ M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y +CG I+ A ++FNEM  +NV++WT +ITG+ KHG A  A+ +F KML    +P+ + Y
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           +AVLSACSH G++ E Q++F+ +  +  + PR+EHY+C+VD LGR+G L EA   I SMP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           +     +W+TLL ACRVHG+ ELGR   E++L  + D+P  Y+++SN+HA AG W +  +
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +RK  + + L K AG SW+EV+  +H F+ G+ +HP   +I+Q L ++  ++K E+G++ 
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK-EMGYIP 545

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
              + LHDI+EE KE+ L  HSEK+A+   L+    +    K IR+FKNLRVCGDCH  I
Sbjct: 546 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLI----STSQSKPIRIFKNLRVCGDCHTAI 601

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +S       VVRD+ RFH  + GVCSC DYW
Sbjct: 602 KYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 234/425 (55%), Gaps = 12/425 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNG 65
           V +R   +  L  C++  LL  G QLH  ++++G + D+ +   L+DMYAKC   G ++ 
Sbjct: 53  VPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDD 112

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
           +  VF++M E NV+SWTA++  + Q+G   K  + LFC+M S  ++PN F+ S+ +KA G
Sbjct: 113 SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 172

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS    G Q++   +K G      VGNS+I MY++ GR+ +A + FD++  K+L+++NA
Sbjct: 173 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 232

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++ GY     S++  LLF ++ + G     FTF S L    S+G++G G QIHG L+  G
Sbjct: 233 IVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG 292

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             Y     I  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G+A+      A+E+
Sbjct: 293 --YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 350

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++ E   + +     +++   +   ++ +G Q H  +     G+   + +   +VD+ 
Sbjct: 351 FHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLL 409

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            + GL+ EA E  N MP+  + + W  ++     HG     +G     ++ + EPD  A 
Sbjct: 410 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAAEMILEQEPDDPAA 467

Query: 422 LAVLS 426
             +LS
Sbjct: 468 YILLS 472



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 150/290 (51%), Gaps = 13/290 (4%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDY-GVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           N  SFS V         L+ C  NL   Y G Q++   VK+G +    + N LI MYA+ 
Sbjct: 160 NHFSFSSV---------LKACG-NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 209

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A   FD + E+N+VS+ A++ G+ +N  ++    LF ++  + +  + FT ++ +
Sbjct: 210 GRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLL 269

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
             +  + ++  G QIHG  +K G++ N  + N++I MYS+CG I  A ++F+ M  +++I
Sbjct: 270 SGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 329

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W +MI G+   G++ + L +F KM E G  P+E T+ + L AC  +G +  G Q H   
Sbjct: 330 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNS 388

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           +        +      +VD   + G LVEA    + +      + W +L+
Sbjct: 389 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 396/676 (58%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+   +NL L  G ++HG ++  GF  +L     ++++YAKC ++  A  +F++M +R++
Sbjct: 149 LQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDL 208

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+ QNG A+  + +  QM  +  KP+  TL + + A   L ++  G  IHG 
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGY 268

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             ++GFE+   V  +++D Y KCG +  A  +F  M ++++++WN MI GY   G S++ 
Sbjct: 269 AFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEA 328

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F KM + G  P   +    L AC +LG +  G  +H  L      + V   +  SL+
Sbjct: 329 FATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS--VMNSLI 386

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  VF  ++ K+V++W+++ILGYAQ   + EA+ LF +++   ++ D F
Sbjct: 387 SMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSF 446

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   AD ++  Q K IH  A +     +  V  +++D + KCG I  A +LF+ M
Sbjct: 447 TLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLM 506

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GYG +G  +EA+ LF +M    V+P+ + +L+V++ACSHSGLVEE  
Sbjct: 507 QERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGM 566

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +  +  ++P ++HY  +VD LGRAGRLD+A   I+ MPVKP I +   +L ACR+
Sbjct: 567 YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRI 626

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG +  + L  LD D+   +V+++N++A A  W++  R+R     KG++K  G S
Sbjct: 627 HKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCS 686

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H FY G   HP +++I+  L  +   MK   G+V     ++HD++E+ KE+ 
Sbjct: 687 LVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAA-GYVPDTN-SIHDVEEDVKEQL 744

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L    LN + G  I + KNLRVCGDCHE  K +S +     +VRD  
Sbjct: 745 LSSHSERLAIAFGL----LNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLR 800

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G+CSCGDYW
Sbjct: 801 RFHHFKNGICSCGDYW 816



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 248/480 (51%), Gaps = 7/480 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+   ++K GF  + +    LI ++ K   +  A  VF+ +  +  V +  ++ G+ +N 
Sbjct: 62  QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNS 121

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  +  + +M    V P  +  +  ++ SG    +  G +IHGM + +GF+ N     
Sbjct: 122 TLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMT 181

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++++Y+KC +I +A +MF+ MP + L++WN ++AGY   G++ + + +  +MQE G+ P
Sbjct: 182 AVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKP 241

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L A   L ++  G  IHG+   +GF Y V   +A +++D Y KCG +  AR 
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVN--VATAMLDTYFKCGSVRSARL 299

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF  +  ++V+SW+++I GYAQ     EA   F ++ +  ++     +   +   A+   
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E+G+ +H    +   G D SV NS++ MY KC  +D A  +F  +  K VVTW  +I G
Sbjct: 360 LERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILG 419

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y ++G   EA+ LF +M   D++PD    ++V++A +   +  +++ +   L     M  
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK-WIHGLAIRTLMDK 478

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +   + ++D+  + G +  A+ L + M  +  I  W  ++     +G    GRE  ++ 
Sbjct: 479 NVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-WNAMIDGYGTNGH---GREALDLF 534



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 196/367 (53%), Gaps = 4/367 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S++   QI  + +K+GF    +    +I ++ K   I EAAR+F+ +  K  + ++ M+
Sbjct: 55  TSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTML 114

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY         +  + +M+    +P  + FT  L+  G    +  G +IHG +IT+GF 
Sbjct: 115 KGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQ 174

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            ++  + A  +V+ Y KC  + +A ++F+ + Q+ ++SW++++ GYAQ      A+++  
Sbjct: 175 SNLFAMTA--VVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVL 232

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           Q++E   + D   L S++   AD   +  G+ IH YA +       +V+ +++D Y KCG
Sbjct: 233 QMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCG 292

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +  A  +F  M  +NVV+W  +I GY ++G ++EA   F KML + VEP  V+ +  L 
Sbjct: 293 SVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALH 352

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           AC++ G +E  + Y  RL ++K++   +   + ++    +  R+D A ++  ++  K ++
Sbjct: 353 ACANLGDLERGR-YVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHK-TV 410

Query: 487 AIWQTLL 493
             W  ++
Sbjct: 411 VTWNAMI 417



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 5/276 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L+ G  +H  L +    FD+ + N LI MY+KC  ++ A +VF  +  + 
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKT 409

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VV+W A++ G+ QNG     L+LFC+M S  +KP+ FTL + I A   LS       IHG
Sbjct: 410 VVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHG 469

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +++  + N  V  ++ID ++KCG I  A ++FD+M  + +ITWNAMI GY   G+  +
Sbjct: 470 LAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGRE 529

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            L LF +MQ     P+E TF S + AC   G V  G     +  +    Y ++  +   G
Sbjct: 530 ALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMY---YFESMKENYGLEPTMDHYG 586

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
           ++VD   + G L +A +    +  K  I+    +LG
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLG 622


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/676 (38%), Positives = 390/676 (57%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C     L  G  +H  + K G   D  +   L+DMY KC E+  A  +FDKM ER++
Sbjct: 37  IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDL 96

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT ++ G+ + G A   L LF +M    V P++  + T + A   L ++     I   
Sbjct: 97  VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 156

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +  F+ + ++G ++IDMY+KCG +  A  +FD M  K++I+W+AMIA Y   G   K 
Sbjct: 157 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 216

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LFR M   G +PD+ T  S L AC  L ++  G  IH   I   F   +   +  +LV
Sbjct: 217 LDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHH--IVYKFGLDLDHFVCAALV 274

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  + +AR +FD + ++ +++W+ +I GYA+  N  E++ LF ++RE  +  D  
Sbjct: 275 DMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 334

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + +++   A    + + + I  Y  +    LD  +  +++DM+ KCG ++ A E+F+ M
Sbjct: 335 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 394

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             KNV++W+ +I  YG HG  ++A+ LF  ML   + P+ +  +++L ACSH+GLVEE  
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +FS +  D  ++  ++HY+C+VD LGRAGRLDEA  LIESM V+    +W   L ACR 
Sbjct: 455 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 514

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D+ L  +    LL L   NP +Y+++SNI+A+AG W +  + R L   + LKK+ G +
Sbjct: 515 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD + H F  GD THP +++I+++L  +  ++ E +G+V    + LHD+ EE K   
Sbjct: 575 WIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL-ELVGYVPDTNFVLHDVDEELKIGI 633

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L+       P   IR+ KNLRVCGDCH F K +S I   V +VRDA 
Sbjct: 634 LYSHSEKLAIAFGLI-ATPEHTP---IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDAN 689

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 690 RFHHFKEGACSCGDYW 705



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 244/448 (54%), Gaps = 11/448 (2%)

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           GF + G+   C   F ++     +P+ +TL   I+A   L +++ G  IH +  K G + 
Sbjct: 4   GFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 63

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V  +++DMY KC  I +A  +FD M  + L+TW  MI GY   G +++ L+LF KM+
Sbjct: 64  DHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR 123

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E G +PD+    + + AC  LG++     I  ++    F   V  ++  +++D Y KCGC
Sbjct: 124 EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV--ILGTAMIDMYAKCGC 181

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR +FD +E+K+VISWS++I  Y       +A++LFR +    +  D   L+S++  
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            +D   ++ G+ IH    K    LD  V  ++VDMY KC  I++A  LF++MP +++VTW
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ---EYFSR 443
           TV+I GY + G A E++ LF KM  + V PD VA + V+ AC+  G + +++   +Y  R
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
               K+ +  +   + ++D   + G ++ A+ + + M  K  I+ W  +++A   HG   
Sbjct: 362 ----KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHGQGR 416

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHA 531
              ++  ++LR  G  P    ++S ++A
Sbjct: 417 KALDLFPMMLR-SGILPNKITLVSLLYA 443



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 143/281 (50%), Gaps = 8/281 (2%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  ++ ++  LA  L  CS    L  G  +H  + K G   D  +   L+DMY KC E+
Sbjct: 224 LSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREI 283

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  +FDKM ER++V+WT ++ G+ + GNA   L LF +M    V P++  + T + A 
Sbjct: 284 EDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC 343

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             L ++     I     +  F+ + ++G ++IDM++KCG +  A  +FD M  K++I+W+
Sbjct: 344 AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWS 403

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           AMIA Y   G   K L LF  M   G +P++ T  S L AC   G V  G +    +   
Sbjct: 404 AMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED 463

Query: 244 GFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSV 282
              YSV+  +     +VD   + G L EA +   LIE  +V
Sbjct: 464 ---YSVRADVKHYTCVVDLLGRAGRLDEALK---LIESMTV 498



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 115/216 (53%), Gaps = 8/216 (3%)

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           ++ G+A+  +       FR+L     + D + L  ++    D   ++ G+ IH    K  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
             LD  V  ++VDMY+KC  I++A  LF++M  +++VTWTV+I GY + G A E++ LF 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQ---EYFSRLCNDKRMKPRIEHYSCIVDSL 464
           KM  + V PD VA + V+ AC+  G + +++   +Y  R    K+ +  +   + ++D  
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR----KKFQLDVILGTAMIDMY 176

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            + G ++ A+ + + M  K  I+ W  +++A   HG
Sbjct: 177 AKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHG 211


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 406/688 (59%), Gaps = 8/688 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +   L   L  C++ + +  G+++HG  VK+G S D+ +NN L+DMY+KCG +  A 
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVL 126
            +FDK   +N VSW  ++ G    G      +LF +M     ++ NE T+   + A   +
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           S + +  ++HG  ++ GF+++ +V N  +  Y+KCG +  A R+F  M  K++ +WNA+I
Sbjct: 250 SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G    G   K L L+ +M   G +PD FT  S L A   L S+  G ++HGF++  G  
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGL- 368

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             + + I  SL+  Y+ CG    AR +FD +E+KS +SW+++I GY+Q     +A+ LFR
Sbjct: 369 -EIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFR 427

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +L     Q     + S++G  +  + +  GK+ H YA K     D  V+ S +DMY K G
Sbjct: 428 KLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSG 487

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            I E+  +F+ +  K++ +W  II  YG HG  +E++ LF +M      PDG  ++ +L+
Sbjct: 488 CIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILT 547

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            CSH+GLVEE  +YF+ + N   ++P++EHY+C++D LGRAGRLD+A  L+  MP +P  
Sbjct: 548 VCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDS 607

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            +W +LLS CR  G+LE+G+ V E LL L+  N  NYV +SN++A +G W++  R+R++ 
Sbjct: 608 RVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMI 667

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           +  GL+K AG SW+E+  ++H F  GD+  P ++++     ++EK+M  ++G+       
Sbjct: 668 KDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMC-KIGYKPNTSAV 726

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           LHD+ EE K E LR HSEKLAI   L    LN   G  +R+FKNLR+C DCH   K +S+
Sbjct: 727 LHDVDEEKKIEKLRGHSEKLAICFGL----LNTTKGTTLRIFKNLRICVDCHNASKFMSE 782

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +     ++RD  RFH F+ G+CSCGDYW
Sbjct: 783 VTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 270/500 (54%), Gaps = 10/500 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+ +L    G  +HG ++KMG   D+ + N LI MY K G ++ A  VF  M  RN+
Sbjct: 38  IKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNL 97

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSW +++ GF +NG +K C  +  +M  G   + P+  TL T +        V+ G++IH
Sbjct: 98  VSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIH 157

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G+ +K G   +  V NS++DMYSKCG + EA  +FD    K+ ++WN MI G    GY  
Sbjct: 158 GLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIF 217

Query: 197 KGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +   LFR+MQ   +I  +E T  + L AC  +  +    ++HG+ I  GF Y    ++A 
Sbjct: 218 EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYD--ELVAN 275

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
             V  Y KCG L+ A RVF  +E K+V SW++LI G AQ  +  +A+ L+ Q+    L  
Sbjct: 276 GFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVP 335

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F + S++   A    +  GK++H +  +    +D+ +  S++ +Y+ CG    A  LF
Sbjct: 336 DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF 395

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  K+ V+W  +I+GY ++GL ++A+ LFRK++ D  +P  +A ++VL ACS    + 
Sbjct: 396 DGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALR 455

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             +E          M+      S I D   ++G + E++++ + +  K  +A W  +++A
Sbjct: 456 LGKETHCYALKALLMEDVFVACSTI-DMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAA 513

Query: 496 CRVHGDLELGREVGEILLRL 515
             VHGD   G E  E+  R+
Sbjct: 514 YGVHGD---GEESIELFERM 530



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 155/316 (49%), Gaps = 17/316 (5%)

Query: 194 YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           YSD  + +F K+    E   D FTF   +KAC      G G  IHG +I  G    V   
Sbjct: 11  YSD-AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV--F 67

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR--E 310
           +  +L+  Y K G +  A +VF  +  ++++SW+S+I G+++     +  ++  ++   E
Sbjct: 68  VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L  D   L +++ V A    V+ G +IH  A K+    D  V+NS+VDMY KCG + E
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACS 429
           A  LF++   KN V+W  +I G    G   EA  LFR+M + +D+E + V  L +L AC 
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC- 246

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIESMPVKPS 485
               +E SQ    +  +   ++   ++   +    V +  + G L  A+ +  SM  K +
Sbjct: 247 ----LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK-T 301

Query: 486 IAIWQTLLSACRVHGD 501
           +  W  L+  C  +GD
Sbjct: 302 VNSWNALIGGCAQNGD 317


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 404/688 (58%), Gaps = 7/688 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL         +L+ C  +  +  G+ +H  ++K  +  ++ + N LI MYA+ G+M  A
Sbjct: 313 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 372

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  M + + +SW +++ GF+QNG     L  + +M  +  KP+   + + I AS   
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 432

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +  NGMQIH   MK+G + +  VGNS++DMY+K   +     +FD MP K +++W  +I
Sbjct: 433 GNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 492

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AG+   G   + L LFR++Q  G   D    +S L AC  L  +    +IH ++I  G  
Sbjct: 493 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS 552

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                V+   +VD Y +CG +  A R+F+LIE K V+SW+S+I  Y       EA+ELF 
Sbjct: 553 ---DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 609

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            ++E  ++ D   L S++   A  + +++GK+IH +  +    L+ S+++++VDMY +CG
Sbjct: 610 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 669

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            ++++  +FN +  K++V WT +I  YG HG  + A+ LFR+M  + + PD +A++AVL 
Sbjct: 670 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 729

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACSHSGL+ E + +   +  + +++P  EHY C+VD LGRA  L+EA   ++ M V+P+ 
Sbjct: 730 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTA 789

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            +W  LL AC++H + ELG    + LL +D +NP NYV++SN++A    W + E +R   
Sbjct: 790 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRM 849

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           ++ GLKK  G SW+EV  ++H F   D +HP + +I+  L ++ +++ +E G+V   K+ 
Sbjct: 850 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 909

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           LH+ +EE K + L  HSE+LAI      G L    G  +R+ KNLRVCGDCH F K +SK
Sbjct: 910 LHNAKEEEKVQMLYGHSERLAIAY----GMLTTPEGASLRITKNLRVCGDCHNFCKLISK 965

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +   V+RDA RFH F+GGVCSCGD W
Sbjct: 966 FFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 287/518 (55%), Gaps = 15/518 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-NVVSWTALMCGFL 89
           G ++HG  +K G+   + + N ++ MY KC ++NGA  +FD+M E+ +VVSW +++  + 
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG +   L LF +M  +S+ PN +T    ++A    S ++ GM IH   +KS +  N  
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N++I MY++ G++ EAA +F  M     I+WN+M++G+V  G   + L  + +M++ G
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           + PD     S + A    G+   G QIH + + +G    ++  +  SLVD Y K   +  
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQ--VGNSLVDMYAKFCSMKY 472

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
              +FD +  K V+SW+++I G+AQ  + + A+ELFR+++   + +D  ++SS++   + 
Sbjct: 473 MDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSG 532

Query: 330 FALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             L+   K+IH+Y  +   GL D  + N IVD+Y +CG +D A  +F  +  K+VV+WT 
Sbjct: 533 LKLISSVKEIHSYIIR--KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTS 590

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+ Y  +GLA EA+ LF  M    VEPD ++ +++LSA +    +++ +E    L   K
Sbjct: 591 MISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR-K 649

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                    S +VD   R G L++++N+   +  K  + +W ++++A  +HG    GR  
Sbjct: 650 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHG---CGRAA 705

Query: 509 GEILLRLDGDN--PVNYVMMSNIHA--DAGSWNECERL 542
            ++  R++ ++  P +   ++ ++A   +G  NE  R 
Sbjct: 706 IDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 743



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 253/486 (52%), Gaps = 8/486 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L  C     L  G Q+H  ++     F+ + L+  L+ MY KCG +  A  +FD M  + 
Sbjct: 121 LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 180

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           + +W A++  ++ NG     L L+ +M  S +  +  T    +KA G+L     G ++HG
Sbjct: 181 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHG 240

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSD 196
           + +K G+     V NSI+ MY+KC  +N A ++FD MP K  +++WN+MI+ Y   G S 
Sbjct: 241 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 300

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF +MQ+    P+ +TF + L+AC     +  G  IH  ++ S   Y +   +A +
Sbjct: 301 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS--YYINVFVANA 358

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y + G + EA  +F  ++    ISW+S++ G+ Q     EA++ + ++R+   + D
Sbjct: 359 LIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 418

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   A       G QIHAYA K     D  V NS+VDMY K   +     +F+
Sbjct: 419 LVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +MP K+VV+WT II G+ ++G    A+ LFR++ L+ ++ D +   ++L ACS   L+  
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 538

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +E  S +         ++  + IVD  G  G +D A  + E +  K  ++ W +++S C
Sbjct: 539 VKEIHSYIIRKGLSDLVLQ--NGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMIS-C 594

Query: 497 RVHGDL 502
            VH  L
Sbjct: 595 YVHNGL 600



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 163/335 (48%), Gaps = 17/335 (5%)

Query: 212 PDEFT----FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           P +F+    ++S L+ CGS  ++  G Q+H  +ITS   ++    ++  LV  Y KCGCL
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFN-SVFLSTRLVFMYGKCGCL 166

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           V+A ++FD +  K++ +W+++I  Y        ++EL+R++R   + +D      ++   
Sbjct: 167 VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 226

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
                   G ++H  A K        V+NSIV MY KC  ++ A +LF+ MP K +VV+W
Sbjct: 227 GLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 286

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+ Y  +G + EA+ LF +M    + P+   ++A L AC  S  +++   +      
Sbjct: 287 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM-FIHATVL 345

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC----RVHGDL 502
                  +   + ++    R G++ EA N+  +M    +I+ W ++LS        H  L
Sbjct: 346 KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSGFVQNGLYHEAL 404

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           +   E     +R  G  P    ++S I A A S N
Sbjct: 405 QFYHE-----MRDAGQKPDLVAVISIIAASARSGN 434


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 397/676 (58%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L+ G +LH AL+K G   ++  N  L+ MY KCG ++ A  VF ++ E++ 
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDY 331

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++  ++QNG     +    +M     +P+   + +   A G L  + NG ++H  
Sbjct: 332 ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K   + +  VGN+++DMY KC  I  +A +FD M  K  I+W  +I  Y  +    + 
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEA 451

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +FR+ Q+ G   D     S L+AC  L ++    Q+H + I +G    +  V+   ++
Sbjct: 452 LEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL---LDLVVKNRII 508

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y +CG +  + ++F+ +EQK +++W+S+I  YA    L EA+ LF +++   +Q D  
Sbjct: 509 DIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSV 568

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++G     + + +GK++H +  +    ++ ++ +S+VDMY  CG +  A ++FN +
Sbjct: 569 ALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAV 628

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K++V WT +I   G HG  K+A+ LF++ML   V PD V++LA+L ACSHS LV E +
Sbjct: 629 KCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGK 688

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            Y   + +  R++P  EHY+C+VD LGR+G+ +EA   I+SMP+KP   +W +LL ACRV
Sbjct: 689 CYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRV 748

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H + EL       LL L+ DNP NYV++SN+ A+ G WN  + +R     +GL+K    S
Sbjct: 749 HKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACS 808

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+E+   +H F   D++H   E+I+  L E+ +R+++E G+    +  LHD+ EE K + 
Sbjct: 809 WIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDV 868

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L+    N +PG  +R+ KNLRVCGDCHEF K +SK+     VVRDA 
Sbjct: 869 LHRHSERLAISFGLI----NTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDAN 924

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F GG CSCGD+W
Sbjct: 925 RFHHFSGGSCSCGDFW 940



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 247/470 (52%), Gaps = 12/470 (2%)

Query: 31  GVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           GVQ+H   V  G     D  L   L+ MY KCG +  A  +FD M  R V SW AL+  +
Sbjct: 77  GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136

Query: 89  LQNGNAKACLSLFCQM---GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           L +G+A   L ++  M    +S V P+  TL++ +KASGV      G ++HG+ +K G +
Sbjct: 137 LSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLD 196

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
            +  V N++I MY+KCG ++ A R+F++M   + + +WN+MI+G +  G   + L LFR 
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           MQ      + +T    L+ C  L  +  G ++H  L+ SG   +++     +L+  Y KC
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ---CNALLVMYTKC 313

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G +  A RVF  I++K  ISW+S++  Y Q    AEA+E   ++     Q D   + S+ 
Sbjct: 314 GRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLS 373

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
                   +  GK++HAYA K     DT V N+++DMY+KC  I+ +  +F+ M +K+ +
Sbjct: 374 SAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHI 433

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +WT IIT Y +     EA+ +FR+   + ++ D +   ++L ACS    +  +++     
Sbjct: 434 SWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYA 493

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             +  +   +++   I+D  G  G +  +  + E++  K  I  W ++++
Sbjct: 494 IRNGLLDLVVKNR--IIDIYGECGEVYHSLKMFETVEQK-DIVTWTSMIN 540



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 12/303 (3%)

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           Q  G  P +  +   L    +  +V  G Q+H   + +G        +A  L+  Y KCG
Sbjct: 50  QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCG 109

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR---ERSLQVDGFVLSS 322
            + +AR +FD +  ++V SW++LI  Y    +  EA+ ++R +R      +  DG  L+S
Sbjct: 110 RVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLAS 169

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEM-P 379
           ++           G ++H  A K   GLD S  V+N+++ MY KCG++D A  +F  M  
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVK--HGLDRSTFVANALIAMYAKCGILDSAMRVFELMHD 227

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++V +W  +I+G  ++G+  +A+ LFR M    +  +    + VL  C+    +   +E
Sbjct: 228 GRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRE 287

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             + L      +  I+  + +V    + GR+D A  +   +  K  I+ W ++LS C V 
Sbjct: 288 LHAALLKSGS-EVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYIS-WNSMLS-CYVQ 343

Query: 500 GDL 502
             L
Sbjct: 344 NGL 346


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 251/688 (36%), Positives = 405/688 (58%), Gaps = 7/688 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL         +L+ C  +  +  G+ +H  ++K  +  ++ + N LI MYA+ G+M  A
Sbjct: 277 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 336

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  M + + +SW +++ GF+QNG     L  + +M  +  KP+   + + I AS   
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 396

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +  +GMQIH   MK+G + +  VGNS++DMY+K   +     +FD MP K +++W  +I
Sbjct: 397 GNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 456

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AG+   G   + L LFR++Q  G   D    +S L AC  L  +    +IH ++I  G  
Sbjct: 457 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS 516

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                V+   +VD Y +CG +  A R+F+LIE K V+SW+S+I  Y       EA+ELF 
Sbjct: 517 ---DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 573

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            ++E  ++ D   L S++   A  + +++GK+IH +  +    L+ S+++++VDMY +CG
Sbjct: 574 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 633

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            ++++  +FN +  K++V WT +I  YG HG  + A+ LFR+M  + + PD +A++AVL 
Sbjct: 634 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 693

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACSHSGL+ E + +   +  + +++P  EHY+C+VD LGRA  L+EA   ++ M V+P+ 
Sbjct: 694 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTA 753

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            +W  LL AC++H + ELG    + LL +D +NP NYV++SN+++    W + E +R   
Sbjct: 754 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRM 813

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           ++ GLKK  G SW+EV  ++H F   D +HP + +I+  L ++ +++ +E G+V   K+ 
Sbjct: 814 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 873

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           LH+ +EE K + L  HSE+LAI      G L    G  +R+ KNLRVCGDCH F K +SK
Sbjct: 874 LHNAKEEEKVQMLYGHSERLAIAY----GMLTTPEGASLRITKNLRVCGDCHNFCKLISK 929

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +   V+RDA RFH F+GGVCSCGD W
Sbjct: 930 FFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 288/519 (55%), Gaps = 15/519 (2%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-NVVSWTALMCGF 88
           YG ++HG  +K G+   + + N ++ MY KC ++NGA  +FD+M E+ +VVSW +++  +
Sbjct: 198 YGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAY 257

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             NG +   L LF +M  +S+ PN +T    ++A    S ++ GM IH   +KS +  N 
Sbjct: 258 SSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV 317

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N++I MY++ G++ EAA +F  M     I+WN+M++G+V  G   + L  + +M++ 
Sbjct: 318 FVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 377

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G+ PD     S + A    G+   G QIH + + +G    ++  +  SLVD Y K   + 
Sbjct: 378 GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQ--VGNSLVDMYAKFCSMK 435

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
               +FD +  K V+SW+++I G+AQ  + + A+ELFR+++   + +D  ++SS++   +
Sbjct: 436 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 495

Query: 329 DFALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              L+   K+IH+Y  +   GL D  + N IVD+Y +CG +D A  +F  +  K+VV+WT
Sbjct: 496 GLKLISSVKEIHSYIIR--KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWT 553

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I+ Y  +GLA EA+ LF  M    VEPD ++ +++LSA +    +++ +E    L   
Sbjct: 554 SMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR- 612

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           K         S +VD   R G L++++N+   +  K  + +W ++++A  +HG    GR 
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHG---CGRA 668

Query: 508 VGEILLRLDGDN--PVNYVMMSNIHA--DAGSWNECERL 542
             ++  R++ ++  P +   ++ ++A   +G  NE  R 
Sbjct: 669 AIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 707



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 253/486 (52%), Gaps = 8/486 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L  C     L  G Q+H  ++     F+ + L+  L+ MY KCG +  A  +FD M  + 
Sbjct: 85  LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 144

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           + +W A++  ++ NG     L L+ +M  S +  +  T    +KA G+L     G ++HG
Sbjct: 145 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHG 204

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSD 196
           + +K G+     V NSI+ MY+KC  +N A ++FD MP K  +++WN+MI+ Y   G S 
Sbjct: 205 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 264

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF +MQ+    P+ +TF + L+AC     +  G  IH  ++ S   Y +   +A +
Sbjct: 265 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSS--YYINVFVANA 322

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y + G + EA  +F  ++    ISW+S++ G+ Q     EA++ + ++R+   + D
Sbjct: 323 LIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 382

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   A       G QIHAYA K     D  V NS+VDMY K   +     +F+
Sbjct: 383 LVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +MP K+VV+WT II G+ ++G    A+ LFR++ L+ ++ D +   ++L ACS   L+  
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 502

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +E  S +         ++  + IVD  G  G +D A  + E +  K  ++ W +++S C
Sbjct: 503 VKEIHSYIIRKGLSDLVLQ--NGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMIS-C 558

Query: 497 RVHGDL 502
            VH  L
Sbjct: 559 YVHNGL 564



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 163/335 (48%), Gaps = 17/335 (5%)

Query: 212 PDEFT----FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           P +F+    ++S L+ CGS  ++  G Q+H  +ITS   ++    ++  LV  Y KCGCL
Sbjct: 72  PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFN-SVFLSTRLVFMYGKCGCL 130

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           V+A ++FD +  K++ +W+++I  Y        ++EL+R++R   + +D      ++   
Sbjct: 131 VDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 190

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
                   G ++H  A K        V+NSIV MY KC  ++ A +LF+ MP K +VV+W
Sbjct: 191 GLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 250

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+ Y  +G + EA+ LF +M    + P+   ++A L AC  S  +++   +      
Sbjct: 251 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGM-FIHATVL 309

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC----RVHGDL 502
                  +   + ++    R G++ EA N+  +M    +I+ W ++LS        H  L
Sbjct: 310 KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTIS-WNSMLSGFVQNGLYHEAL 368

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           +   E     +R  G  P    ++S I A A S N
Sbjct: 369 QFYHE-----MRDAGQKPDLVAVISIIAASARSGN 398


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/697 (38%), Positives = 413/697 (59%), Gaps = 24/697 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           ++V+F LV     LA ++R  S    L  G Q+H   +K+G    L ++N LI+MY K  
Sbjct: 321 DQVTFILV-----LATAVRLDS----LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 371

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
           ++  A  VF+ M ER+++SW +++ G  Q+      + LF Q+    +KP+ +T+++ +K
Sbjct: 372 KIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLK 431

Query: 122 ASGVLSSVENGM----QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           A+   SS+  G+    QIH   +K+    +  V  ++ID YS+   + EA  +F      
Sbjct: 432 AA---SSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG-RNNF 487

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            L+ WNAM++GY  +    K L LF  M + GE  D+FT  + LK CG L ++  G Q+H
Sbjct: 488 DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
            + I SG  Y +   ++  ++D YVKCG +  A+  FD I     ++W++LI G  +   
Sbjct: 548 AYAIKSG--YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGE 605

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
              A+ +F Q+R   +  D F ++++    +    +EQG+QIHA A K+    D  V  S
Sbjct: 606 EERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTS 665

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +VDMY KCG ID+A  LF  + + N+  W  ++ G  +HG  KEA+ LF++M    ++PD
Sbjct: 666 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPD 725

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            V ++ VLSACSHSGLV E+ +Y   +  D  +KP IEHYSC+ D+LGRAG + EA+NLI
Sbjct: 726 KVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLI 785

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           +SM ++ S ++++TLL+ACRV GD E G+ V   LL L+  +   YV++SN++A A  W+
Sbjct: 786 DSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWD 845

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E +  R + +   +KK  G SW+EV  +IH F   D ++P TE I++ + +M + +K+E 
Sbjct: 846 EMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQE- 904

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+V    + L D++EE KE +L  HSEKLA+   L    L+  P   IRV KNLRVCGDC
Sbjct: 905 GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL----LSTPPSTPIRVIKNLRVCGDC 960

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  +K +SK+     V+RDA RFHRF+ G+CSCGDYW
Sbjct: 961 HNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 250/488 (51%), Gaps = 28/488 (5%)

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           ++S   ++ G+L  G   A L  F  M  S ++ ++ T    +  +  L S+  G Q+H 
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           M +K G +    V NS+I+MY K  +I  A  +F+ M  + LI+WN++IAG   +    +
Sbjct: 347 MALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVE 406

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVIAGS 256
            + LF ++   G  PD +T TS LKA  SL   +    QIH   I +       + ++ +
Sbjct: 407 AVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTN--NVADSFVSTA 464

Query: 257 LVDFYVKCGCLVEA-----RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           L+D Y +  C+ EA     R  FDL      ++W++++ GY Q  +  + +ELF  + ++
Sbjct: 465 LIDAYSRNRCMKEAEVLFGRNNFDL------VAWNAMMSGYTQSHDGHKTLELFALMHKQ 518

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
             + D F L++++        + QGKQ+HAYA K    LD  VS+ I+DMY+KCG +  A
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD--GVAYLAVLSACS 429
              F+ +PV + V WT +I+G  ++G  + A+ +F +M L  V PD   +A LA  S+C 
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
            + L +  Q + + L  +    P +   + +VD   + G +D+A  L + + +  +I  W
Sbjct: 639 -TALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAW 694

Query: 490 QTLLSACRVHGDLELGREVGEILLRLD--GDNP--VNYVMMSNIHADAGSWNECER-LRK 544
             +L     HG+   G+E  ++  +++  G  P  V ++ + +  + +G  +E  + +R 
Sbjct: 695 NAMLVGLAQHGE---GKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRS 751

Query: 545 LARSKGLK 552
           + R  G+K
Sbjct: 752 MHRDYGIK 759



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 184/403 (45%), Gaps = 45/403 (11%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG-- 92
           H  ++ +  + +  L N+LI MY+KCG +  A  VFDKM ER++VSW +++  + Q+   
Sbjct: 69  HARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEG 128

Query: 93  ---NAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFEW 146
              N K    LF  +    V  +  TLS  +K    SG + + E+    HG   K G + 
Sbjct: 129 VVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASES---FHGYACKIGLDG 185

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V  +++++Y K G++ E   +F+ MP + ++ WN M+  Y+  G+ ++ + L     
Sbjct: 186 DDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 245

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P+E T     +  G     G                 VK+   G+          
Sbjct: 246 TSGLHPNEITLRLLSRISGDDSEAG----------------QVKSFENGN---------- 279

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
             +A  V ++I +  ++S      GY      +  ++ F  + E  L+ D      ++  
Sbjct: 280 --DASAVSEIISRNKILS------GYLHAGQYSALLKCFMDMVESDLECDQVTFILVLAT 331

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                 +  G+Q+H  A K+   L  +VSNS+++MY K   I  A  +FN M  +++++W
Sbjct: 332 AVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISW 391

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
             +I G  +  L  EAV LF ++L   ++PD     +VL A S
Sbjct: 392 NSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 43/259 (16%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GK  HA    +    +  + N+++ MY KCG +  A  +F++MP +++V+W  I+  Y +
Sbjct: 65  GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124

Query: 396 HGL-----AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN---- 446
                    KEA  LFR +  D V    +    +L  C HSG V  S+ +    C     
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184

Query: 447 -DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  +         +V+   + G++ E + L E MP +  + +W  +L A      LE+G
Sbjct: 185 GDDFVA------GALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKAY-----LEMG 232

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
            +   I L             S  H      NE   LR L+R  G    AG        +
Sbjct: 233 FKEEAIDLS------------SAFHTSGLHPNEIT-LRLLSRISGDDSEAG--------Q 271

Query: 566 IHFFYGGDDTHPLTEKIHQ 584
           +  F  G+D   ++E I +
Sbjct: 272 VKSFENGNDASAVSEIISR 290


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/676 (36%), Positives = 395/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS   +L++G ++H  +++ G + D  + N LI MYAKCG +  A  VFD M  R+ 
Sbjct: 136 LSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE 195

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT L   + ++G  +  L  +  M    V+P+  T    + A G L+++E G QIH  
Sbjct: 196 VSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAH 255

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++S +  +  V  ++  MY KCG   +A  +F+ +  + +I WN MI G+V +G  ++ 
Sbjct: 256 IVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEA 315

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F +M E G  PD  T+T+ L AC   G +  G +IH      G    V+     +L+
Sbjct: 316 HGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR--FGNALI 373

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K G + +AR+VFD + ++ V+SW++L+  YA  + + E+   F+Q+ ++ ++ +  
Sbjct: 374 NMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKI 433

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++   ++   ++ GK+IHA   K     D +V+N+++ MY KCG +++A  +F  M
Sbjct: 434 TYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM 493

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            +++VVTW  +I G G++G   EA+  +  M  + + P+   ++ VLSAC    LVEE +
Sbjct: 494 SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR 553

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
             F+ +  D  + P  +HY+C+VD L RAG L EA+++I ++P+KPS A+W  LL+ACR+
Sbjct: 554 RQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRI 613

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G    E  L+L+  N   YV +S I+A AG W +  +LRK  + +G+KK  GRS
Sbjct: 614 HCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRS 673

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+E+  E+H F   D +HP T++I+  L  ++K+MK  LG+V   ++ +HD+ +E KE +
Sbjct: 674 WIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMK-SLGYVPDTRFVMHDLDDEGKERA 732

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           +  HSEKLAI   L+    +  PG  IR+ KNLRVC DCH   K +SKI K   + RDA 
Sbjct: 733 VCHHSEKLAIAYGLI----STPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAH 788

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 789 RFHHFKNGECSCGDYW 804



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 282/558 (50%), Gaps = 39/558 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C K   L  G Q+H  +++ G   ++ + N L+ +YA CG +N A  +FDK   ++V
Sbjct: 35  LQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSV 94

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+   G A+   +LF  M    ++P++FT  + + A    + +  G +IH  
Sbjct: 95  VSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVR 154

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M++G   +  VGN++I MY+KCG + +A R+FD M ++  ++W  +   Y  +GY ++ 
Sbjct: 155 VMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEES 214

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  +  M +    P   T+ + L ACGSL ++  G QIH  ++ S +   V+  ++ +L 
Sbjct: 215 LKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVR--VSTALT 272

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y+KCG   +AR VF+ +  + VI+W+++I G+     L EA   F ++ E  +  D  
Sbjct: 273 KMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRA 332

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             ++++   A    + +GK+IHA AAK     D    N++++MY K G + +A ++F+ M
Sbjct: 333 TYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 392

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P ++VV+WT ++  Y       E+   F++ML   V+ + + Y+ VL ACS+   ++  +
Sbjct: 393 PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGK 452

Query: 439 E-----------------------YFS--------RLCNDKRMKPRIEHYSCIVDSLGRA 467
           E                       YF         R+     M+  +  ++ ++  LG+ 
Sbjct: 453 EIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVT-WNTLIGGLGQN 511

Query: 468 GRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--N 522
           GR  EA    E M    ++P+ A +  +LSACRV   +E GR     + +  G  P   +
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKH 571

Query: 523 YVMMSNIHADAGSWNECE 540
           Y  M +I A AG   E E
Sbjct: 572 YACMVDILARAGHLREAE 589



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 42/379 (11%)

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           + + +   G   D + +   L++C     +  G Q+H  ++  G   +V   I  +L+  
Sbjct: 15  VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNV--YITNTLLKL 72

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y  CG + EAR++FD    KSV+SW+ +I GYA      EA  LF  +++  L+ D F  
Sbjct: 73  YAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++   +  A++  G++IH    +     DT+V N+++ MY KCG + +A  +F+ M  
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           ++ V+WT +   Y + G  +E++  +  ML + V P  + Y+ VLSAC     +E+ ++ 
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252

Query: 441 FSRLC-----NDKRM--------------KPRIEHYSCI-----------VDSLGRAGRL 470
            + +      +D R+              K   E + C+           +     +G+L
Sbjct: 253 HAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQL 312

Query: 471 DEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV--- 524
           +EA      M    V P  A + T+LSAC   G L  G+   EI  R   D  V+ V   
Sbjct: 313 EEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGK---EIHARAAKDGLVSDVRFG 369

Query: 525 -MMSNIHADAGSWNECERL 542
             + N+++ AGS  +  ++
Sbjct: 370 NALINMYSKAGSMKDARQV 388



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 132/283 (46%), Gaps = 2/283 (0%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +  +R      L  C++   L  G ++H    K G   D+   N LI+MY+K G M  A 
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD+M +R+VVSWT L+  +          + F QM    VK N+ T    +KA     
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +++ G +IH   +K+G   +  V N+++ MY KCG + +A R+F+ M  + ++TWN +I 
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    G   + L  +  M+  G  P+  TF + L AC     V  G +   F+ +  +  
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFM-SKDYGI 565

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLI 289
                    +VD   + G L EA  V   I  K S   W +L+
Sbjct: 566 VPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALL 608


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/681 (37%), Positives = 393/681 (57%), Gaps = 9/681 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  CS    L  G QLH  L+K G S D ++   L+D+Y K G++  A  +FD   
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD 306

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             NVV W  ++  + Q  +      +F +M ++ V+PN+FT    ++       +  G Q
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ 366

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+GF+ +  V   +IDMYSK G +++A R+ D++  K +++W +MIAGYV   +
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEF 426

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L  F++MQ  G  PD     S + AC  + +V  G+QIH  +  SG  YS    I 
Sbjct: 427 CKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSG--YSADVSIW 484

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             LV  Y +CG   EA   F+ IE K  I+W+ LI G+AQ     EA+++F ++ +   +
Sbjct: 485 NGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F   S +   A+ A ++QGKQIHA   K     +T +SN+++ +Y KCG I++A   
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EM  +N V+W  IIT   +HG   EA+ LF +M    ++P  V ++ VL+ACSH GLV
Sbjct: 605 FFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLV 664

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE   YF  + N+  + PR +HY+C+VD LGRAG+LD AK  +E MP+     +W+TLLS
Sbjct: 665 EEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLS 724

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC+VH +LE+G    + LL L+  +  +YV++SN +A  G W   +++RK+ + +G++K 
Sbjct: 725 ACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSW+EV   +H F+ GD  HPL ++I+  L  +  R+  ++G+     +  H+ ++E 
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLY-KIGYKQENYHLFHEKEKEG 843

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
           K+ +  VHSEKLA+       GL   P  + +RV KNLRVC DCH ++K  S ++    V
Sbjct: 844 KDPTAFVHSEKLAVAF-----GLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIV 898

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           +RD  RFH F  G CSCGDYW
Sbjct: 899 LRDVYRFHHFNNGSCSCGDYW 919



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 250/486 (51%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H  + K GF  +  + N LI +Y +C     A  VF  ML
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDML 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V++  L+ G  Q G+    L +F +M  S + P+  T+++ + A   +  +  G Q
Sbjct: 206 YCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G   + ++  S++D+Y K G I EA ++FD     +++ WN M+  Y     
Sbjct: 266 LHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDD 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   +F +M   G  P++FT+   L+ C   G +G G QIH   I +GF   +   ++
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +A+R+ D+IE+K V+SW+S+I GY Q E   EA+E F++++   + 
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    V QG QIHA         D S+ N +V +Y +CG+  EA   
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSS 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +  K  +TW  +I+G+ + GL +EA+ +F KM     + +   +++ +SA ++   +
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  +R+          E  + ++   G+ G +++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHARVIKTG-YTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS-WNTIIT 621

Query: 495 ACRVHG 500
            C  HG
Sbjct: 622 CCSQHG 627



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 262/508 (51%), Gaps = 19/508 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   +  G S   ++ N LID+YAK G +  A  VF+++  R+ VSW A++ G+ QNG
Sbjct: 63  EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + L+ +M  S V P  + LS+ + A       + G  IH    K GF     VGN
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++I +Y +C     A R+F  M     +T+N +I+G+   G+ D+ L +F +MQ  G  P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L AC ++G +  G Q+H +L+ +G   S+  ++ GSL+D YVK G + EA +
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGM--SLDYIMEGSLLDLYVKSGDIEEALQ 300

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD  ++ +V+ W+ +++ Y Q ++LA++ ++F ++    ++ + F    M+        
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  G+QIH+   K     D  VS  ++DMY K G +D+A  + + +  K+VV+WT +I G
Sbjct: 361 IGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAG 420

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVEESQEYFSRLCND 447
           Y +H   KEA+  F++M    + PD +   + +SAC+     H G    ++ Y S    D
Sbjct: 421 YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSAD 480

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
                 +  ++ +V    R G   EA +  E++  K  I  W  L+S     G   L  E
Sbjct: 481 ------VSIWNGLVYLYARCGISKEAFSSFEAIEHKEGIT-WNGLISGFAQSG---LYEE 530

Query: 508 VGEILLRLD--GDNPVNYVMMSNIHADA 533
             ++ +++D  G     +  +S+I A A
Sbjct: 531 ALKVFMKMDQAGAKYNVFTFVSSISASA 558



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 5/323 (1%)

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGG 232
           M  +   ++N  +AG++     +K L LF        +     F   L+AC GS      
Sbjct: 1   MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
             +IH   I  G   S   +I   L+D Y K G +  ARRVF+ +  +  +SW +++ GY
Sbjct: 61  VPEIHAKAIICGL--SGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGY 118

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           AQ     EA+ L+R++    +    +VLSS++       L + G+ IH    K     +T
Sbjct: 119 AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSET 178

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V N+++ +YL+C     A  +F +M   + VT+  +I+G+ + G    A+G+F +M L 
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLS 238

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            + PD V   ++L+ACS  G + + ++  S L         I   S ++D   ++G ++E
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS-LLDLYVKSGDIEE 297

Query: 473 AKNLIESMPVKPSIAIWQTLLSA 495
           A  + +S   + ++ +W  +L A
Sbjct: 298 ALQIFDSGD-RTNVVLWNLMLVA 319


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/668 (38%), Positives = 394/668 (58%), Gaps = 8/668 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G Q+HGA+V+ G+   + + N  I+MY K G +N A  +F +M E +++SW  ++ G
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEW 146
             ++G  +  L LF  +  S + P++FT+++ ++A S +  S   G Q+H   +K+G   
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVL 432

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V  ++ID+YSK G++ EA  +F       L +WNAM+ G+ ++    + L LF  M 
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E GE  D+ TF +  KA G L  +  G QIH  +I   F Y +  VI+G ++D Y+KCG 
Sbjct: 493 ERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL-FVISG-ILDMYLKCGE 550

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR+VF+ I     ++W+++I G  +     +A+  + Q+R   +Q D +  ++++  
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            +    +EQGKQIHA   K+    D  V  S+VDMY KCG I++A  LF  M  ++V  W
Sbjct: 611 CSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALW 670

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I G  +HG A+EA+  F +M    V PD V ++ VLSACSHSGL  ++ + F  +  
Sbjct: 671 NAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQK 730

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              ++P IEHYSC+VD+L RAG + EA+ ++ SMP + S  +++TLL+ACRV GD E G 
Sbjct: 731 TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGE 790

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
            V E L  +D  +   YV++SNI+A A  W      R + +   +KK  G SW+++  ++
Sbjct: 791 RVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKV 850

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
           H F  GD +H  T+ I+  +  + KR+KEE G+V   ++AL DI+EE KE +L  HSEKL
Sbjct: 851 HLFVAGDRSHEETDLIYNKVEYVMKRIKEE-GYVPDTEFALVDIEEEDKESALSYHSEKL 909

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           AI   L++      P   +RV KNLRVCGDCH  IK +S + +   V+RDA RFH F  G
Sbjct: 910 AIAYGLMK----TPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSG 965

Query: 687 VCSCGDYW 694
           +CSCGDYW
Sbjct: 966 ICSCGDYW 973



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 221/431 (51%), Gaps = 7/431 (1%)

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + +V  W   +  +LQ G     +  F  M  S V  +  T    +     L+ +E G Q
Sbjct: 259 DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQ 318

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  ++ G++    V NS I+MY K G +N A RMF  M    LI+WN +I+G   +G 
Sbjct: 319 IHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGL 378

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFLITSGFPYSVKTVI 253
            +  L LF  +   G +PD+FT TS L+AC SL  S   G Q+H   + +G    + + +
Sbjct: 379 EECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI--VLDSFV 436

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           + +L+D Y K G + EA  +F   +   + SW++++ G+   +N  EA+ LF  + ER  
Sbjct: 437 STALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE 496

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D    ++          ++QGKQIHA   K+    D  V + I+DMYLKCG +  A +
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARK 556

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +FN++P  + V WT +I+G  ++G  ++A+  + +M L  V+PD   +  ++ ACS    
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616

Query: 434 VEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +E+ ++  + +   +    P +   + +VD   + G +++A  L   M  + S+A+W  +
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAM 673

Query: 493 LSACRVHGDLE 503
           +     HG+ E
Sbjct: 674 IVGLAQHGNAE 684



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 188/426 (44%), Gaps = 45/426 (10%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  +ADS      +L+L  G + H  +V  G + D  + N+LI MYAKCG +  A  +FD
Sbjct: 21  RHAIADS------DLIL--GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFD 72

Query: 72  --KMLERNVVSWTALMCGFLQNG------NAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
                +R++V++ A++  +   G             +F  +  S +     TLS   K  
Sbjct: 73  ITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
            +  S      + G  +K G +W+  V  +++++Y+K  RI EA  +FD MP + ++ WN
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            M+  YV  G  D+ L LF      G  PD  +  + L   G                  
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK----------------- 235

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
                 KTV    L            A ++F   +   V  W+  +  Y Q     EA++
Sbjct: 236 ------KTVFERELEQVRAY------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVD 283

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            FR + +  +  D      ++ V A    +E GKQIH    +       SV+NS ++MY+
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           K G ++ A  +F +M   ++++W  +I+G  + GL + ++ LF  +L   + PD     +
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403

Query: 424 VLSACS 429
           VL ACS
Sbjct: 404 VLRACS 409



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 52/391 (13%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +S  C +  SS+ P  F++  +  A    S +  G + H + + SG   +  V N++I M
Sbjct: 1   MSRKCSVSPSSLLPQWFSILRHAIAD---SDLILGKRTHAVIVTSGLNPDRYVTNNLITM 57

Query: 158 YSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAG------YSDKGLLLFRKMQEHG 209
           Y+KCG +  A ++FD+ P   + L+T+NA++A Y   G       + +   +FR +++  
Sbjct: 58  YAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSV 117

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +    T +   K C   GS      + G+ +  G  + V   +AG+LV+ Y K   + E
Sbjct: 118 MLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDV--FVAGALVNIYAKFQRIRE 175

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF-VLSSMMGVFA 328
           AR +FD +  + V+ W+ ++  Y +     E + LF       L+ D   V + +MGV  
Sbjct: 176 ARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK 235

Query: 329 DFALVEQGKQIHAYAAKV---PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV-- 383
                 + +Q+ AYA K+       D +V N  +  YL+ G   EA + F +M    V  
Sbjct: 236 KTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPC 295

Query: 384 --VTWTVIIT----------GYGKHG------------LAKEAVGLF---------RKML 410
             +T+ VI++          G   HG            +A  A+ ++         R+M 
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
               E D +++  V+S C+ SGL E S   F
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLF 386



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 25/329 (7%)

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLIL 290
           G + H  ++TSG   +    +  +L+  Y KCG L  AR++FD+  Q  + ++++++++ 
Sbjct: 32  GKRTHAVIVTSGL--NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILA 89

Query: 291 GYAQE------ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
            YA        E   EA  +FR LR+  +      LS +  +   +      + +  YA 
Sbjct: 90  AYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV 149

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           K+    D  V+ ++V++Y K   I EA  LF+ MPV++VV W V++  Y + G   E +G
Sbjct: 150 KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLG 209

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE----YFSRL--CNDKRMKPRIEHYS 458
           LF       + PD V+   +L       + E   E    Y ++L  C+D      +  ++
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDD---DSDVTVWN 266

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIA----IWQTLLSACRVHGDLELGREVGEILLR 514
             + S  +AG   EA +    M +K  +      +  +LS       LELG+++   ++R
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR 325

Query: 515 LDGDNPVNYVMMS-NIHADAGSWNECERL 542
              D  V+    + N++  AGS N   R+
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRM 354



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  ++ CS    L+ G Q+H  ++K+  +FD  +   L+DMYAKCG +  A  +F +M 
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMN 663

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVEN 131
            R+V  W A++ G  Q+GNA+  L+ F +M S  V P+  T    + A   SG+ S    
Sbjct: 664 TRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK 723

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
                 M    G E      + ++D  S+ G I EA ++   MP ++  T
Sbjct: 724 NFD--SMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASAT 771


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/695 (37%), Positives = 413/695 (59%), Gaps = 17/695 (2%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+  +FS VS+      SLR       ++ G QLHG ++K GF     + N L+  Y K 
Sbjct: 193 MDSYTFSCVSKS---FSSLRS------VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN 243

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
             ++ A  VFD+M ER+V+SW +++ G++ NG A+  LS+F QM  S ++ +  T+ +  
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF 303

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
                   +  G  +H   +K+ F       N+++DMYSKCG ++ A  +F  M  +S++
Sbjct: 304 AGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVV 363

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           ++ +MIAGY   G + + + LF +M+E G  PD +T T+ L  C     +  G ++H ++
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
             +   + +   ++ +L+D Y KCG + EA  VF  +  K +ISW+++I GY++     E
Sbjct: 424 KENDMGFDI--FVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481

Query: 301 AMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           A+ LF  L  E+    D   ++ ++   A  +  ++G++IH Y  +     D  V+NS+V
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY KCG +  A  LF+++  K++V+WTV+I GYG HG  KEA+ LF +M    +EPD +
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           +++++L ACSHSGLV+E   +F+ + ++ +++P +EHY+CIVD L R G L +A   IE+
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIEN 661

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP+ P   IW  LL  CR+H D++L   V E +  L+ +N   YV+M+NI+A+A  W E 
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEV 721

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
           +RLRK    +GL+K  G SW+E+   ++ F  GD ++P TEKI   L  +  RM EE G+
Sbjct: 722 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEE-GY 780

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
               KYAL D +E  KEE+L  HSEKLA+ L ++  G     GK+IRV KNLRVCGDCHE
Sbjct: 781 SPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSG----HGKIIRVTKNLRVCGDCHE 836

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SK+ +   V+RD+ RFH+F+ G CSC  +W
Sbjct: 837 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/522 (30%), Positives = 272/522 (52%), Gaps = 10/522 (1%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + L   L+ C+ +  L  G ++   +   GF  D  L + L  MY  CG++  A  VFD+
Sbjct: 95  RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQ 154

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           +     + W  LM    ++G+    + LF +M SS V+ + +T S   K+   L SV  G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+HG  +KSGF     VGNS++  Y K  R++ A ++FD M  + +I+WN++I GYV  
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G ++KGL +F +M   G   D  T  S    C     +  G  +H F + + F  S +  
Sbjct: 275 GLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF--SREDR 332

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +L+D Y KCG L  A+ VF  +  +SV+S++S+I GYA+E    EA++LF ++ E  
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           +  D + +++++   A   L+++GK++H +  +   G D  VSN+++DMY KCG + EA 
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHS 431
            +F+EM VK++++W  +I GY K+  A EA+ LF  +L++    PD      VL AC+  
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
              ++ +E    +  +     R    S +VD   + G L  A+ L + +  K  ++ W  
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLARLLFDDITSKDLVS-WTV 570

Query: 492 LLSACRVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHA 531
           +++   +HG    G+E   +   +R  G  P     +S ++A
Sbjct: 571 MIAGYGMHG---FGKEAIALFNQMRQAGIEPDEISFVSLLYA 609



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 220/420 (52%), Gaps = 6/420 (1%)

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
            +R+V      +  F ++GN K  + L    G   + P   TL + ++      S+++G 
Sbjct: 57  FDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++      +GF  +  +G+ +  MY+ CG + EA+R+FD +  +  + WN ++     +G
Sbjct: 115 EVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSG 174

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                + LF+KM   G   D +TF+   K+  SL SV GG Q+HG+++ SGF    +  +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGF--GERNSV 232

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLV FY+K   +  AR+VFD + ++ VISW+S+I GY       + + +F Q+    +
Sbjct: 233 GNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI 292

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           ++D   + S+    AD  L+  G+ +H +  K     +    N+++DMY KCG +D A  
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKV 352

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F EM  ++VV++T +I GY + GLA EAV LF +M  + + PD     AVL+ C+ + L
Sbjct: 353 VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++E +     +  +  M   I   + ++D   + G + EA+ +   M VK  I+ W T++
Sbjct: 413 LDEGKRVHEWI-KENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIIS-WNTVI 470


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/671 (38%), Positives = 409/671 (60%), Gaps = 17/671 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           ++ GVQ+H  ++K G    + + N +++MY+K   ++ A AVFD M  RN VSW +++ G
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAG 268

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F+ NG       LF +M    VK  +   +T IK    +  +    Q+H   +K+G +++
Sbjct: 269 FVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFD 328

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             +  +++  YSKC  I++A ++F +M   +++++W A+I+GYV  G +D+ + LF +M+
Sbjct: 329 LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMR 388

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P+ FT+++ L A  ++      +QIH  ++ + +  S    +  +L D Y K G 
Sbjct: 389 REGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPS--VGTALSDSYSKIGD 442

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
             EA ++F+LI++K +++WS+++ GYAQ  ++  A+++F QL +  ++ + F  SS++  
Sbjct: 443 ANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNA 502

Query: 327 -FADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
             A  A VEQGKQ H+ + K  SG   +  VS+++V MY K G I+ A E+F     +++
Sbjct: 503 CAAPTASVEQGKQFHSCSIK--SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 560

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+W  +I+GY +HG  K+++ +F +M   ++E DG+ ++ V+SAC+H+GLV E Q YF  
Sbjct: 561 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 620

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +  D  + P +EHYSC+VD   RAG L++A +LI  MP      IW+TLL+ACRVH +++
Sbjct: 621 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQ 680

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           LG    E L+ L   +   YV++SNI+A AG+W E  ++RKL   K +KK AG SW+EV 
Sbjct: 681 LGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK 740

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
            +   F  GD +HP +++I+  L E+  R+K+  G+    KY LHD++EE KE  L  HS
Sbjct: 741 NKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA-GYYPDTKYVLHDVEEEHKEVILSQHS 799

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           E+LAI   L+       PG  I++ KNLRVCGDCH  IK +SKI     VVRD+ RFH F
Sbjct: 800 ERLAIAFGLIA----TPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHF 855

Query: 684 EGGVCSCGDYW 694
           +GG CSCGDYW
Sbjct: 856 KGGSCSCGDYW 866



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 277/523 (52%), Gaps = 29/523 (5%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   +K GF  D+ +   L+DMY K   +     VFD+M  +NVVSWT+L+ G+ Q
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQ 170

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L LF QM    +KPN FT +  +       +VE G+Q+H M +KSG +    V
Sbjct: 171 NGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GNS+++MYSK   +++A  +FD M  ++ ++WN+MIAG+V  G   +   LF +M+  G 
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG--FPYSVKTVIAGSLVDFYVKCGCLV 268
              +  F + +K C ++  +    Q+H  +I +G  F  ++KT    +L+  Y KC  + 
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKT----ALMVAYSKCSEID 346

Query: 269 EARRVFDLIEQ-KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           +A ++F ++   ++V+SW+++I GY Q      AM LF Q+R   ++ + F  S+++   
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A  +      QIHA   K       SV  ++ D Y K G  +EA ++F  +  K++V W+
Sbjct: 407 AAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCN 446
            +++GY + G  + AV +F ++  + VEP+   + +VL+AC + +  VE+ +++ S  C+
Sbjct: 463 AMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS--CS 520

Query: 447 DKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-- 500
              +K    +  C+  +L     + G ++ A  + +   V   +  W +++S    HG  
Sbjct: 521 ---IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQHGCG 576

Query: 501 --DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
              L++  E+    L LDG   + ++ + +    AG  NE +R
Sbjct: 577 KKSLKIFEEMRSKNLELDG---ITFIGVISACTHAGLVNEGQR 616



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 217/389 (55%), Gaps = 16/389 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  ++ C+    + +  QLH  ++K G  FDL +   L+  Y+KC E++ A  +F  M 
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMH 356

Query: 75  E-RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             +NVVSWTA++ G++QNG     ++LFCQM    V+PN FT ST + A+  +S      
Sbjct: 357 GVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----S 412

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QIH + +K+ +E +P VG ++ D YSK G  NEAA++F+++  K ++ W+AM++GY   G
Sbjct: 413 QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMG 472

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS-LGSVGGGTQIHGFLITSGFPYSVKTV 252
             +  + +F ++ + G  P+EFTF+S L AC +   SV  G Q H   I SGF  ++   
Sbjct: 473 DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNAL--C 530

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           ++ +LV  Y K G +  A  VF     + ++SW+S+I GYAQ     +++++F ++R ++
Sbjct: 531 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 590

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLI 368
           L++DG     ++       LV +G++      K    VP+    S    +VD+Y + G++
Sbjct: 591 LELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC---MVDLYSRAGML 647

Query: 369 DEATELFNEMPVKNVVT-WTVIITGYGKH 396
           ++A +L N+MP     T W  ++     H
Sbjct: 648 EKAMDLINKMPFPAGATIWRTLLAACRVH 676



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 248/480 (51%), Gaps = 14/480 (2%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD+  ++ +     L+  F +N   K  L+LF  +  S    +  +LS  +K  G L  
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G Q+H  C+K GF  +  VG S++DMY K   + +  R+FD M  K++++W +++AG
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G +++ L LF +MQ  G  P+ FTF + L    + G+V  G Q+H  +I SG   +
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  S+V+ Y K   + +A+ VFD +E ++ +SW+S+I G+       EA ELF ++
Sbjct: 228 I--FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R   +++   + ++++ + A+   +   KQ+H    K  S  D ++  +++  Y KC  I
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 369 DEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           D+A +LF  M  V+NVV+WT II+GY ++G    A+ LF +M  + V P+   Y  +L+A
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
              +  V  SQ +   +  +    P +   + + DS  + G  +EA  + E +  K  +A
Sbjct: 406 ---NAAVSPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELIDEKDIVA 460

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAGSWNECERLRKL 545
            W  +LS     GD+E      +I L+L  +G  P  +   S ++A A      E+ ++ 
Sbjct: 461 -WSAMLSGYAQMGDIE---GAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQF 516


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/688 (37%), Positives = 386/688 (56%), Gaps = 9/688 (1%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            L  +   LA  +  CS +  L  G QLH    K+GF+ +  +   L+++YAKC ++  A 
Sbjct: 368  LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETAL 427

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
              F +    NVV W  ++  +    + +    +F QM    + PN++T  + +K    L 
Sbjct: 428  NYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 487

Query: 128  SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
             +E G QIH   +K+ F+ N  V + +IDMY+K G+++ A  +      K +++W  MIA
Sbjct: 488  DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 188  GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            GY    + DK L  FR+M + G   DE   T+ + AC  L ++  G QIH     SGF  
Sbjct: 548  GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-- 605

Query: 248  SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            S       +LV  Y KCG + EA   F+  E    I+W++L+ G+ Q  N  EA+ +F +
Sbjct: 606  SSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFAR 665

Query: 308  LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
            +    +  + F   S +   ++ A ++QGKQ+HA   K     +T V N+I+ MY KCG 
Sbjct: 666  MNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGS 725

Query: 368  IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            I +A + F E+ +KN V+W  +I  Y KHG   EA+  F +M+  +V P+ V  + VLSA
Sbjct: 726  ISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 785

Query: 428  CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            CSH GLV++  EYF  +  +  + P+ EHY C+VD L RAG L  AK+ I  MP++P   
Sbjct: 786  CSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDAL 845

Query: 488  IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            +W+TLLSAC VH ++E+G      LL L+ ++   YV++SN++A    W+  +  R+  +
Sbjct: 846  VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMK 905

Query: 548  SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
             KG+KK  G+SW+EV   IH FY GD  HPL ++IH+   ++ KR   E+G+V      L
Sbjct: 906  EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKR-ASEIGYVQDCFSLL 964

Query: 608  HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSK 666
             ++Q+E K+ ++ +HSEKLAI       GL   P  + I V KNLRVC DCH++IK +SK
Sbjct: 965  SELQQEQKDPTIFIHSEKLAISF-----GLLSLPATMPINVMKNLRVCNDCHDWIKFVSK 1019

Query: 667  ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +     +VRDA RFH FEGG CSC DYW
Sbjct: 1020 VSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 249/483 (51%), Gaps = 21/483 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   N  LD G +LH  ++K+GF  +  L+  L+D Y   G+++GA  VFD+M ER + +
Sbjct: 77  CLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFT 136

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM------- 133
           W  ++        +     LF +M + +V PNE T       SGVL +   G        
Sbjct: 137 WNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTF------SGVLEACRGGSVAFDVVE 190

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QIH   +  G   + +V N +ID+YS+ G ++ A R+FD +  K   +W AMI+G     
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + + LF  M   G +P  + F+S L AC  + S+  G Q+HG ++  GF  S  T +
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYV 308

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LV  Y   G L+ A  +F  + Q+  +++++LI G +Q     +AMELF++++   L
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL 368

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D   L+S++   +    +  G+Q+HAY  K+    +  +  +++++Y KC  I+ A  
Sbjct: 369 EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN 428

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F E  V+NVV W V++  YG     + +  +FR+M ++++ P+   Y ++L  C   G 
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           +E  ++  S++    +   ++  Y C  ++D   + G+LD A +++     K  ++ W T
Sbjct: 489 LELGEQIHSQII---KTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTT 544

Query: 492 LLS 494
           +++
Sbjct: 545 MIA 547



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 255/517 (49%), Gaps = 5/517 (0%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   ++  D   Q+H  ++  G     ++ N LID+Y++ G ++ A  VFD +  ++  S
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G  +N      + LFC M    + P  +  S+ + A   + S+E G Q+HG+ +
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF  +  V N+++ +Y   G +  A  +F  M  +  +T+N +I G    GY +K + 
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 358

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF++MQ  G  PD  T  S + AC S G++  G Q+H +    GF  + K  I G+L++ 
Sbjct: 359 LFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDK--IEGALLNL 416

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KC  +  A   F   E ++V+ W+ +++ Y   ++L  +  +FRQ++   +  + +  
Sbjct: 417 YAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 476

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +E G+QIH+   K    L+  V + ++DMY K G +D A ++      
Sbjct: 477 PSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 536

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K+VV+WT +I GY ++    +A+  FR+ML   +  D V     +SAC+    ++E Q+ 
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++ C        +   + +V    + G ++EA    E      +IA W  L+S  +  G
Sbjct: 597 HAQACVSG-FSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIA-WNALVSGFQQSG 654

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           + E    V   + R +G +  N+   S + A + + N
Sbjct: 655 NNEEALRVFARMNR-EGIDSNNFTFGSAVKAASETAN 690



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 242/482 (50%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C K   L+ G QLHG ++K+GFS D  + N L+ +Y   G +  A  +F  M +R+ 
Sbjct: 278 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDA 337

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V++  L+ G  Q G  +  + LF +M    ++P+  TL++ + A     ++ +G Q+H  
Sbjct: 338 VTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAY 397

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K GF  N  +  +++++Y+KC  I  A   F     ++++ WN M+  Y L       
Sbjct: 398 TTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNS 457

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +FR+MQ    +P+++T+ S LK C  LG +  G QIH  +I + F   +   +   L+
Sbjct: 458 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF--QLNAYVCSVLI 515

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A  +      K V+SW+++I GY Q     +A+  FRQ+ +R ++ D  
Sbjct: 516 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 575

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L++ +   A    +++G+QIHA A       D    N++V +Y KCG I+EA   F + 
Sbjct: 576 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQT 635

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              + + W  +++G+ + G  +EA+ +F +M  + ++ +   + + + A S +  +++ +
Sbjct: 636 EAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGK 695

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  + +          E  + I+    + G + +AK     + +K  ++ W  +++A   
Sbjct: 696 QVHA-VITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSK 753

Query: 499 HG 500
           HG
Sbjct: 754 HG 755



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 45/445 (10%)

Query: 109 VKPNEFTLS----TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
           ++PN  TL       +K +G   S++ G ++H   +K GF+ N  +   ++D Y   G +
Sbjct: 63  IRPNHQTLKWLLEGCLKTNG---SLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDL 119

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           + A ++FD MP +++ TWN MI        S K   LF +M      P+E TF+  L+AC
Sbjct: 120 DGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC 179

Query: 225 GSLGSVGGGT--QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
              GSV      QIH  +I  G   S  T++   L+D Y + G +  ARRVFD +  K  
Sbjct: 180 RG-GSVAFDVVEQIHARIIYQGLGKS--TIVCNPLIDLYSRNGFVDRARRVFDGLYLKDH 236

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
            SW ++I G ++ E   EA+ LF  +    +    +  SS++        +E G+Q+H  
Sbjct: 237 SSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 296

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
             K+    DT V N++V +Y   G +  A  +F+ M  ++ VT+  +I G  + G  ++A
Sbjct: 297 VLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 356

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE---YFSRL---CNDKRMKPRIEH 456
           + LF++M LD +EPD     +++ ACS  G +   Q+   Y ++L    NDK     +  
Sbjct: 357 MELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNL 416

Query: 457 YSCIVD---------------------SLGRAGRLDEAKN---LIESMPVK---PSIAIW 489
           Y+   D                      L   G LD+ +N   +   M ++   P+   +
Sbjct: 417 YAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 476

Query: 490 QTLLSACRVHGDLELGREVGEILLR 514
            ++L  C   GDLELG ++   +++
Sbjct: 477 PSILKTCIRLGDLELGEQIHSQIIK 501


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/676 (36%), Positives = 392/676 (57%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L++G ++H  +++ G + +  + N LI MYAKCG +  A  VFD M  R+ 
Sbjct: 152 LSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDE 211

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT L   + ++G A+  L  +  M    V+P+  T    + A G L+++E G QIH  
Sbjct: 212 VSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQ 271

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++S    +  V  ++  MY KCG + +A  +F+ +P + +I WN MI G V +G  ++ 
Sbjct: 272 IVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEA 331

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F +M +    PD  T+ + L AC   G +  G +IH   +  G    V+     +L+
Sbjct: 332 HGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR--FGNALI 389

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K G + +AR+VFD + ++ V+SW++L+ GYA    + E+   F+++ ++ ++ +  
Sbjct: 390 NMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKI 449

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++   ++   ++ GK+IHA   K     D +V+N+++ MY KCG +++A  +   M
Sbjct: 450 TYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGM 509

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++VVTW  +I G  ++G   EA+  F  M  +++ P+   ++ V+SAC    LVEE +
Sbjct: 510 STRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGR 569

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
             F+ +  D  + P  +HY+C+VD L RAG L EA+++I +MP KPS A+W  LL+ACR 
Sbjct: 570 RQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRA 629

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG++E+G +  E  L+L+  N   YV +S I+A AG W +  +LRKL + +G+KK  GRS
Sbjct: 630 HGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRS 689

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV  E+H F  GD +HP TE+I+  L  + K++K  LG+V   ++ +HD+ +E KE +
Sbjct: 690 WIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIK-SLGYVPDTRFVMHDLDQEGKERA 748

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           +  HSEKLAI   L+    +  P   IRV KNLRVC DCH   K +SKI     + RDA 
Sbjct: 749 VCHHSEKLAIAYGLI----STPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAH 804

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 805 RFHHFKNGECSCGDYW 820



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 157/557 (28%), Positives = 277/557 (49%), Gaps = 37/557 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C K   L  G Q+H  +++ G   ++ + N L+ +Y  CG +N A  +FDK   ++V
Sbjct: 51  LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSV 110

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+   G  +   +LF  M    ++P++FT  + + A    +++  G ++H  
Sbjct: 111 VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVR 170

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M++G   N  VGN++I MY+KCG + +A R+FD M ++  ++W  +   Y  +GY+ + 
Sbjct: 171 VMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQES 230

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  +  M + G  P   T+ + L ACGSL ++  G QIH  ++ S     V+  ++ +L 
Sbjct: 231 LKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR--VSTALT 288

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y+KCG + +AR VF+ +  + VI+W+++I G      L EA  +F ++ +  +  D  
Sbjct: 289 KMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRV 348

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              +++   A    +  GK+IHA A K     D    N++++MY K G + +A ++F+ M
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P ++VV+WT ++ GY   G   E+   F+KML   VE + + Y+ VL ACS+   ++  +
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGK 468

Query: 439 EYFSRL---------------------CNDKRMKPRIEH---------YSCIVDSLGRAG 468
           E  + +                     C       R+           ++ ++  L + G
Sbjct: 469 EIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNG 528

Query: 469 RLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NY 523
           R  EA    E M    ++P+   +  ++SACRV   +E GR     + +  G  P   +Y
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHY 588

Query: 524 VMMSNIHADAGSWNECE 540
             M +I A AG   E E
Sbjct: 589 ACMVDILARAGHLGEAE 605



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 164/332 (49%), Gaps = 18/332 (5%)

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           S +  ++MI       Y+   +L +  + + G   D + +   L++C     +  G Q+H
Sbjct: 10  SRVDKSSMIPTSTDGWYAPADVLQY--LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVH 67

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
             ++  G   +V   I  +L+  YV CG + EARR+FD    KSV+SW+ +I GYA    
Sbjct: 68  EHILRFGMKPNV--YIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGL 125

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             EA  LF  +++  L+ D F   S++   +  A +  G+++H    +     + +V N+
Sbjct: 126 GQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNA 185

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KCG + +A  +F+ M  ++ V+WT +   Y + G A+E++  +  ML + V P 
Sbjct: 186 LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPS 245

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG------RAGRLD 471
            + Y+ VLSAC     +E+ ++  +++          EH+S +  S        + G + 
Sbjct: 246 RITYMNVLSACGSLAALEKGKQIHAQIVES-------EHHSDVRVSTALTKMYIKCGAVK 298

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +A+ + E +P +  IA W T++      G LE
Sbjct: 299 DAREVFECLPNRDVIA-WNTMIGGLVDSGQLE 329


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/665 (38%), Positives = 401/665 (60%), Gaps = 8/665 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG ++K GF     + N L+  Y K   ++ A  VFD+M ER+V+SW +++ G++ 
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG A+  LS+F QM  S ++ +  T+ +          +  G  +H + +K+ F      
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++DMYSKCG ++ A  +F  M  +S++++ +MIAGY   G + + + LF +M+E G 
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD +T T+ L  C     +  G ++H ++  +   + +   ++ +L+D Y KCG + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEA 451

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFAD 329
             VF  +  K +ISW+++I GY++     EA+ LF  L  E+    D   ++ ++   A 
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +  ++G++IH Y  +     D  V+NS+VDMY KCG +  A  LF+++  K++V+WTV+
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I GYG HG  KEA+ LF +M    +E D ++++++L ACSHSGLV+E   +F+ + ++ +
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++P +EHY+CIVD L R G L +A   IE+MP+ P   IW  LL  CR+H D++L  +V 
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 691

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E +  L+ +N   YV+M+NI+A+A  W + +RLRK    +GL+K  G SW+E+   ++ F
Sbjct: 692 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD ++P TE I   L ++  RM EE G+    KYAL D +E  KEE+L  HSEKLA+ 
Sbjct: 752 VAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           L ++  G     GK+IRV KNLRVCGDCHE  K +SK+ +   V+RD+ RFH+F+ G CS
Sbjct: 811 LGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866

Query: 690 CGDYW 694
           C  +W
Sbjct: 867 CRGFW 871



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 154/489 (31%), Positives = 257/489 (52%), Gaps = 5/489 (1%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + L   L+ C+ +  L  G ++   +   GF  D  L + L  MY  CG++  A  VFD+
Sbjct: 95  RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           +     + W  LM    ++G+    + LF +M SS V+ + +T S   K+   L SV  G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+HG  +KSGF     VGNS++  Y K  R++ A ++FD M  + +I+WN++I GYV  
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G ++KGL +F +M   G   D  T  S    C     +  G  +H   + + F  S +  
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF--SREDR 332

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +L+D Y KCG L  A+ VF  +  +SV+S++S+I GYA+E    EA++LF ++ E  
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           +  D + +++++   A + L+++GK++H +  +   G D  VSN+++DMY KCG + EA 
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHS 431
            +F+EM VK++++W  II GY K+  A EA+ LF  +L +    PD      VL AC+  
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
              ++ +E    +  +     R    S +VD   + G L  A  L + +  K  ++ W  
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLAHMLFDDIASKDLVS-WTV 570

Query: 492 LLSACRVHG 500
           +++   +HG
Sbjct: 571 MIAGYGMHG 579



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 220/420 (52%), Gaps = 6/420 (1%)

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
            +R+V      +  F ++GN +  + L C  G   + P   TL + ++      S+++G 
Sbjct: 57  FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++      +GF  +  +G+ +  MY+ CG + EA+R+FD +  +  + WN ++     +G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                + LF+KM   G   D +TF+   K+  SL SV GG Q+HGF++ SGF    +  +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF--GERNSV 232

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLV FY+K   +  AR+VFD + ++ VISW+S+I GY       + + +F Q+    +
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           ++D   + S+    AD  L+  G+ +H+   K     +    N+++DMY KCG +D A  
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F EM  ++VV++T +I GY + GLA EAV LF +M  + + PD     AVL+ C+   L
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++E +     +  +  +   I   + ++D   + G + EA+ +   M VK  I+ W T++
Sbjct: 413 LDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTII 470



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 6   FSLVSERQRLADSLR-------CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
           F+L+ E +R +   R        C+     D G ++HG +++ G+  D  + N L+DMYA
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           KCG +  A  +FD +  +++VSWT ++ G+  +G  K  ++LF QM  + ++ +E +  +
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA 176
            + A      V+ G +   + M+   +  P V +   I+DM ++ G + +A R  + MP 
Sbjct: 606 LLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 664

Query: 177 KSLIT-WNAMIAG 188
               T W A++ G
Sbjct: 665 PPDATIWGALLCG 677


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/662 (37%), Positives = 397/662 (59%), Gaps = 8/662 (1%)

Query: 33   QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            ++HG + K+GF     + N LI  Y K GE++ A  +FD++ +R+VVSW +++ G + NG
Sbjct: 574  RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633

Query: 93   NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             + + L  F QM    V  +  TL  ++ A   + S+  G  +HG  +K+ F    +  N
Sbjct: 634  FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693

Query: 153  SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +++DMYSKCG +N+A + F+ M  K++++W ++IA YV  G  D  + LF +M+  G  P
Sbjct: 694  TLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSP 753

Query: 213  DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            D ++ TS L AC    S+  G  +H ++  +     +   ++ +L+D Y KCG + EA  
Sbjct: 754  DVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLP--VSNALMDMYAKCGSMEEAYL 811

Query: 273  VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            VF  I  K ++SW+++I GY++     EA++LF ++++ S + DG  ++ ++      A 
Sbjct: 812  VFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAA 870

Query: 333  VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            +E G+ IH    +     +  V+N+++DMY+KCG +  A  LF+ +P K+++TWTV+I+G
Sbjct: 871  LEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG 930

Query: 393  YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             G HGL  EA+  F+KM +  ++PD + + ++L ACSHSGL+ E   +F+ + ++  M+P
Sbjct: 931  CGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEP 990

Query: 453  RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++EHY+C+VD L R G L +A NLIE+MP+KP   IW  LL  CR+H D+EL  +V E +
Sbjct: 991  KLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHV 1050

Query: 513  LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
              L+ DN   YV+++NI+A+A  W E ++LR+    +GLKK  G SW+EV  +   F   
Sbjct: 1051 FELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSA 1110

Query: 573  DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
            D  HP  + I  +L  +  +MK E G    ++YAL +  +  KE +L  HSEKLA+    
Sbjct: 1111 DTAHPQAKSIFSLLNNLRIKMKNE-GHSPKMRYALINAGDMEKEVALCGHSEKLAMAF-- 1167

Query: 633  VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
              G LN   G+ IRV KNLRVC DCHE  K +SK  +   ++RD+ RFH F+ G CSC D
Sbjct: 1168 --GILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRD 1225

Query: 693  YW 694
            +W
Sbjct: 1226 FW 1227



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 265/516 (51%), Gaps = 11/516 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN- 77
           L+ C+++  L  G  +H  +   G   + +L   L+ MY  CG +     +FD +L  N 
Sbjct: 458 LQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNK 517

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V  W  +M  + + G+ +  + LF +M    +  N +T S  +K    L  V    +IHG
Sbjct: 518 VFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHG 577

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              K GF     V NS+I  Y K G ++ A ++FD +  + +++WN+MI+G V+ G+S  
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L  F +M       D  T  +++ AC ++GS+  G  +HG  + + F  S + +   +L
Sbjct: 638 ALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACF--SREVMFNNTL 695

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L +A + F+ + QK+V+SW+SLI  Y +E    +A+ LF ++  + +  D 
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           + ++S++   A    +++G+ +H Y  K    L   VSN+++DMY KCG ++EA  +F++
Sbjct: 756 YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 815

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +PVK++V+W  +I GY K+ L  EA+ LF +M   +  PDG+    +L AC     +E  
Sbjct: 816 IPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAALEIG 874

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +     +  +      +   + ++D   + G L  A+ L + +P K  I  W  ++S C 
Sbjct: 875 RGIHGCILRNG-YSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLIT-WTVMISGCG 932

Query: 498 VHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHA 531
           +HG   LG E       +R+ G  P      S ++A
Sbjct: 933 MHG---LGNEAIATFQKMRIAGIKPDEITFTSILYA 965



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 222/414 (53%), Gaps = 7/414 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            L +S+  C+    L  G  LHG  VK  FS ++M NN L+DMY+KCG +N A   F+KM 
Sbjct: 657  LVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG 716

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VVSWT+L+  +++ G     + LF +M S  V P+ +++++ + A    +S++ G  
Sbjct: 717  QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRD 776

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            +H    K+       V N+++DMY+KCG + EA  +F  +P K +++WN MI GY     
Sbjct: 777  VHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSL 836

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             ++ L LF +MQ+    PD  T    L ACGSL ++  G  IHG ++ +G  YS +  +A
Sbjct: 837  PNEALKLFAEMQKESR-PDGITMACLLPACGSLAALEIGRGIHGCILRNG--YSSELHVA 893

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +L+D YVKCG LV AR +FD+I +K +I+W+ +I G        EA+  F+++R   ++
Sbjct: 894  NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 953

Query: 315  VDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D    +S++   +   L+ +G    ++  ++            +VD+  + G + +A  
Sbjct: 954  PDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYN 1013

Query: 374  LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            L   MP+K +   W  ++ G   H   + A  +   +   ++EPD   Y  +L+
Sbjct: 1014 LIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF--ELEPDNAGYYVLLA 1065



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 168/337 (49%), Gaps = 19/337 (5%)

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M +  E+ D   ++S L+ C     +  G  +H  + ++G P  ++ V+   LV  YV 
Sbjct: 442 RMSQKSEL-DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIP--IEGVLGAKLVFMYVS 498

Query: 264 CGCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           CG L E RR+FD ++    V  W+ ++  YA+  +  E++ LF+++++  +  + +  S 
Sbjct: 499 CGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSC 558

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++  FA    V + K+IH    K+  G   +V NS++  Y K G +D A +LF+E+  ++
Sbjct: 559 ILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRD 618

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           VV+W  +I+G   +G +  A+  F +ML+  V  D    +  ++AC++ G +        
Sbjct: 619 VVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLS-----LG 673

Query: 443 RLCNDKRMKP----RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           R  + + +K      +   + ++D   + G L++A    E M  K ++  W +L++A   
Sbjct: 674 RALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK-TVVSWTSLIAAYVR 732

Query: 499 HGDLELGREVGEILLRLD--GDNPVNYVMMSNIHADA 533
            G   L  +   +   ++  G +P  Y M S +HA A
Sbjct: 733 EG---LYDDAIRLFYEMESKGVSPDVYSMTSVLHACA 766


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/688 (38%), Positives = 395/688 (57%), Gaps = 41/688 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +LR C      D G Q+H  L+  GF  D  + N LIDMYAKC +      VFD+M 
Sbjct: 178 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG 237

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS--VKPNEFTLSTNIKASGVLSSVENG 132
           ERN V+W +++    Q G+    L LF +M  S   ++P++FT +T +       +   G
Sbjct: 238 ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQG 297

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            QIH   +++    N +V   ++ MYS+CGR+N A  +F+ M  ++  +WN+MI GY   
Sbjct: 298 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 357

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G + + L LF++MQ +G  PD F+ +S L +C SL     G ++H F++ +      + +
Sbjct: 358 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM--EEEGI 415

Query: 253 IAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           +   LVD Y KCG +  A +V+D  + + ++   W+S++ GYA +    E+   F ++ E
Sbjct: 416 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLE 475

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++ D   + +++ +                           +  ++VDMY KCG I +
Sbjct: 476 SDIEYDVLTMVTIVNLLV-------------------------LETALVDMYSKCGAITK 510

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+ M  KN+V+W  +I+GY KHG +KEA+ L+ +M    + P+ V +LA+LSACSH
Sbjct: 511 ARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH 570

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVEE    F+ +  D  ++ + EHY+C+VD LGRAGRL++AK  +E MP++P ++ W 
Sbjct: 571 TGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWG 630

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
            LL ACRVH D+++GR   + L  LD  NP  YV+MSNI+A AG W E E +R++ + KG
Sbjct: 631 ALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKG 690

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH-- 608
           +KK  G SW+E++ EI  F+ G  THP TE+I+  L  +  + K  LG++    + L   
Sbjct: 691 VKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSK-GLGYIPDTSFILQNV 749

Query: 609 -DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSK 666
            DI+EE +EE L  HSE+LA+ L L+       P K  IRVFKNLR+CGDCH   K +SK
Sbjct: 750 KDIKEEEEEEYLLQHSERLALSLGLI-----SLPKKSTIRVFKNLRICGDCHTATKFISK 804

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           I     + RD  RFH FE G CSCGDYW
Sbjct: 805 ITGRRIIARDTNRFHHFENGKCSCGDYW 832



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 257/498 (51%), Gaps = 27/498 (5%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC---AVFDKMLERNVVSWTALMCG 87
           G  +H  ++  G++ D  L   ++ +YA+ G ++  C    +F++M ERN+ +W  ++  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + +  +      +F +M    V P+ FT ++ ++  G L S + G Q+H   +  GF+ +
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ- 206
             VGN++IDMY+KC       ++FD M  ++ +TWN++I+     G+ +  L+LF +MQ 
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269

Query: 207 -EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            E G  PD+FTFT+ L  C +  +   G QIH  LI +    ++  ++   LV  Y +CG
Sbjct: 270 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI--IVETELVHMYSECG 327

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L  A+ +F+ + +++  SW+S+I GY Q     EA+ LF+Q++   ++ D F LSSM+ 
Sbjct: 328 RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 387

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NV 383
                +  ++G+++H +  +     +  +   +VDMY KCG +D A +++++   K  N 
Sbjct: 388 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNT 447

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL----------AVLSACSHSGL 433
             W  I+ GY   GL KE+   F +ML  D+E D +  +          A++   S  G 
Sbjct: 448 ALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGA 507

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK---PSIAIWQ 490
           + +++  F  + N K     I  ++ ++    + G   EA  L E MP K   P+   + 
Sbjct: 508 ITKARTVFDNM-NGK----NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFL 562

Query: 491 TLLSACRVHGDLELGREV 508
            +LSAC   G +E G  +
Sbjct: 563 AILSACSHTGLVEEGLRI 580



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 38/240 (15%)

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE---A 371
           V+    SS++    D    ++GK IH          D  +   I+ +Y + G +D+   A
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            +LF EMP +N+  W  +I  Y +     EA G+F +ML   V PD   + + L  C   
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188

Query: 432 GLVEESQEYFSRL---------------------CNDK--------RMKPRIE-HYSCIV 461
              +  ++  S+L                     C+D+         M  R +  ++ I+
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248

Query: 462 DSLGRAGRLDEAKNLIESMP-----VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
            +  + G  ++A  L   M      ++P    + TLL+ C    +   GR++   L+R +
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/665 (38%), Positives = 401/665 (60%), Gaps = 8/665 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG ++K GF     + N L+  Y K   ++ A  VFD+M ER+V+SW +++ G++ 
Sbjct: 63  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG A+  LS+F QM  S ++ +  T+ +          +  G  +H + +K+ F      
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++DMYSKCG ++ A  +F  M  +S++++ +MIAGY   G + + + LF +M+E G 
Sbjct: 183 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 242

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD +T T+ L  C     +  G ++H ++  +   + +   ++ +L+D Y KCG + EA
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEA 300

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFAD 329
             VF  +  K +ISW+++I GY++     EA+ LF  L  E+    D   ++ ++   A 
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +  ++G++IH Y  +     D  V+NS+VDMY KCG +  A  LF+++  K++V+WTV+
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I GYG HG  KEA+ LF +M    +E D ++++++L ACSHSGLV+E   +F+ + ++ +
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++P +EHY+CIVD L R G L +A   IE+MP+ P   IW  LL  CR+H D++L  +V 
Sbjct: 481 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 540

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E +  L+ +N   YV+M+NI+A+A  W + +RLRK    +GL+K  G SW+E+   ++ F
Sbjct: 541 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 600

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD ++P TE I   L ++  RM EE G+    KYAL D +E  KEE+L  HSEKLA+ 
Sbjct: 601 VAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 659

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           L ++  G     GK+IRV KNLRVCGDCHE  K +SK+ +   V+RD+ RFH+F+ G CS
Sbjct: 660 LGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 715

Query: 690 CGDYW 694
           C  +W
Sbjct: 716 CRGFW 720



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 231/432 (53%), Gaps = 5/432 (1%)

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD++     + W  LM    ++G+    + LF +M SS V+ + +T S   K+   L SV
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G Q+HG  +KSGF     VGNS++  Y K  R++ A ++FD M  + +I+WN++I GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V  G ++KGL +F +M   G   D  T  S    C     +  G  +H   + + F  S 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF--SR 178

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +     +L+D Y KCG L  A+ VF  +  +SV+S++S+I GYA+E    EA++LF ++ 
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
           E  +  D + +++++   A + L+++GK++H +  +   G D  VSN+++DMY KCG + 
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSAC 428
           EA  +F+EM VK++++W  II GY K+  A EA+ LF  +L +    PD      VL AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +     ++ +E    +  +     R    S +VD   + G L  A  L + +  K  ++ 
Sbjct: 359 ASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLAHMLFDDIASKDLVS- 416

Query: 489 WQTLLSACRVHG 500
           W  +++   +HG
Sbjct: 417 WTVMIAGYGMHG 428



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 219/410 (53%), Gaps = 11/410 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ + L+  G  +H   VK  FS +    N L+DMY+KCG+++ A AVF +M +R+VVS+
Sbjct: 155 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 214

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ + G A   + LF +M    + P+ +T++  +        ++ G ++H    +
Sbjct: 215 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 274

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +   ++  V N+++DMY+KCG + EA  +F  M  K +I+WN +I GY    Y+++ L L
Sbjct: 275 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 334

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F  + E     PDE T    L AC SL +   G +IHG+++ +G+ +S + V A SLVD 
Sbjct: 335 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHV-ANSLVDM 392

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG L+ A  +FD I  K ++SW+ +I GY       EA+ LF Q+R+  ++ D    
Sbjct: 393 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 452

Query: 321 SSMMGVFADFALVEQGKQ---IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
            S++   +   LV++G +   I  +  K+   ++      IVDM  + G + +A      
Sbjct: 453 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA--CIVDMLARTGDLIKAYRFIEN 510

Query: 378 MPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           MP+  +   W  ++ G   H   K A  +  K+   ++EP+   Y  +++
Sbjct: 511 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF--ELEPENTGYYVLMA 558



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 174/326 (53%), Gaps = 10/326 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L CC++  LLD G ++H  + +    FD+ ++N L+DMYAKCG M  A  VF +M  +++
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 312

Query: 79  VSWTALMCGFLQNGNAKACLSLF-CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +SW  ++ G+ +N  A   LSLF   +      P+E T++  + A   LS+ + G +IHG
Sbjct: 313 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             M++G+  +  V NS++DMY+KCG +  A  +FD + +K L++W  MIAGY + G+  +
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            + LF +M++ G   DE +F S L AC   G V  G +   F         ++  +    
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR---FFNIMRHECKIEPTVEHYA 489

Query: 256 SLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            +VD   + G L++A R  +   I   + I W +L+ G     ++  A ++  ++ E   
Sbjct: 490 CIVDMLARTGDLIKAYRFIENMPIPPDATI-WGALLCGCRIHHDVKLAEKVAEKVFELEP 548

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQI 339
           +  G+ +  M  ++A+    EQ K++
Sbjct: 549 ENTGYYV-LMANIYAEAEKWEQVKRL 573



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 6   FSLVSERQRLADSLR-------CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
           F+L+ E +R +   R        C+     D G ++HG +++ G+  D  + N L+DMYA
Sbjct: 335 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 394

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           KCG +  A  +FD +  +++VSWT ++ G+  +G  K  ++LF QM  + ++ +E +  +
Sbjct: 395 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 454

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA 176
            + A      V+ G +   + M+   +  P V +   I+DM ++ G + +A R  + MP 
Sbjct: 455 LLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 513

Query: 177 KSLIT-WNAMIAG 188
               T W A++ G
Sbjct: 514 PPDATIWGALLCG 526


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/688 (37%), Positives = 384/688 (55%), Gaps = 9/688 (1%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            L  +   LA  +  CS +  L  G QLH    K+GF+ +  +   L+++YAKC ++  A 
Sbjct: 385  LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
              F +    NVV W  ++  +    + +    +F QM    + PN++T  + +K    L 
Sbjct: 445  DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504

Query: 128  SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
             +E G QIH   +K+ F+ N  V + +IDMY+K G+++ A  +      K +++W  MIA
Sbjct: 505  DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 188  GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            GY    + DK L  FR+M + G   DE   T+ + AC  L ++  G QIH     SGF  
Sbjct: 565  GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-- 622

Query: 248  SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            S       +LV  Y +CG + E+   F+  E    I+W++L+ G+ Q  N  EA+ +F +
Sbjct: 623  SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682

Query: 308  LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
            +    +  + F   S +   ++ A ++QGKQ+HA   K     +T V N+++ MY KCG 
Sbjct: 683  MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742

Query: 368  IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            I +A + F E+  KN V+W  II  Y KHG   EA+  F +M+  +V P+ V  + VLSA
Sbjct: 743  ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802

Query: 428  CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            CSH GLV++   YF  + ++  + P+ EHY C+VD L RAG L  AK  I+ MP+KP   
Sbjct: 803  CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862

Query: 488  IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            +W+TLLSAC VH ++E+G      LL L+ ++   YV++SN++A +  W+  +  R+  +
Sbjct: 863  VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922

Query: 548  SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
             KG+KK  G+SW+EV   IH FY GD  HPL ++IH+   ++ KR   E+G+V      L
Sbjct: 923  EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLL 981

Query: 608  HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSK 666
            +++Q E K+  + +HSEKLAI       GL   P  V I V KNLRVC DCH +IK +SK
Sbjct: 982  NELQHEQKDPIIFIHSEKLAISF-----GLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1036

Query: 667  ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +     +VRDA RFH FEGG CSC DYW
Sbjct: 1037 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 246/483 (50%), Gaps = 21/483 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   N  LD G +LH  ++K+G   +  L+  L D Y   G++ GA  VFD+M ER + +
Sbjct: 94  CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM------- 133
           W  ++              LF +M S +V PNE T       SGVL +   G        
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF------SGVLEACRGGSVAFDVVE 207

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QIH   +  G   + VV N +ID+YS+ G ++ A R+FD +  K   +W AMI+G     
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + + LF  M   G +P  + F+S L AC  + S+  G Q+HG ++  GF  S  T +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYV 325

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LV  Y   G L+ A  +F  + Q+  +++++LI G +Q     +AMELF+++    L
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D   L+S++   +    + +G+Q+HAY  K+    +  +  +++++Y KC  I+ A +
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F E  V+NVV W V++  YG     + +  +FR+M ++++ P+   Y ++L  C   G 
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           +E  ++  S++    +   ++  Y C  ++D   + G+LD A +++     K  ++ W T
Sbjct: 506 LELGEQIHSQII---KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTT 561

Query: 492 LLS 494
           +++
Sbjct: 562 MIA 564



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 257/519 (49%), Gaps = 9/519 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   ++  D   Q+H  ++  G     ++ N LID+Y++ G ++ A  VFD +  ++  S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G  +N      + LFC M    + P  +  S+ + A   + S+E G Q+HG+ +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF  +  V N+++ +Y   G +  A  +F  M  +  +T+N +I G    GY +K + 
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF++M   G  PD  T  S + AC + G++  G Q+H +    GF  + K  I G+L++ 
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK--IEGALLNL 433

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KC  +  A   F   E ++V+ W+ +++ Y   ++L  +  +FRQ++   +  + +  
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +E G+QIH+   K    L+  V + ++DMY K G +D A ++      
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K+VV+WT +I GY ++    +A+  FR+ML   +  D V     +SAC+    ++E Q+ 
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++ C        +   + +V    R G+++E+    E      +IA W  L+S  +  G
Sbjct: 614 HAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSG 671

Query: 501 DLELGREVGEILLRL--DGDNPVNYVMMSNIHADAGSWN 537
           + E   E   + +R+  +G +  N+   S + A + + N
Sbjct: 672 NNE---EALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 240/482 (49%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C K   L+ G QLHG ++K+GFS D  + N L+ +Y   G +  A  +F  M +R+ 
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V++  L+ G  Q G  +  + LF +M    ++P+  TL++ + A     ++  G Q+H  
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K GF  N  +  +++++Y+KC  I  A   F     ++++ WN M+  Y L       
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +FR+MQ    +P+++T+ S LK C  LG +  G QIH  +I + F   +   +   L+
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVCSVLI 532

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A  +      K V+SW+++I GY Q     +A+  FRQ+ +R ++ D  
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L++ +   A    +++G+QIHA A       D    N++V +Y +CG I+E+   F + 
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              + + W  +++G+ + G  +EA+ +F +M  + ++ +   + + + A S +  +++ +
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  + +          E  + ++    + G + +A+     +  K  ++ W  +++A   
Sbjct: 713 QVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSK 770

Query: 499 HG 500
           HG
Sbjct: 771 HG 772


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/688 (37%), Positives = 384/688 (55%), Gaps = 9/688 (1%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            L  +   LA  +  CS +  L  G QLH    K+GF+ +  +   L+++YAKC ++  A 
Sbjct: 345  LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 404

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
              F +    NVV W  ++  +    + +    +F QM    + PN++T  + +K    L 
Sbjct: 405  DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 464

Query: 128  SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
             +E G QIH   +K+ F+ N  V + +IDMY+K G+++ A  +      K +++W  MIA
Sbjct: 465  DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 524

Query: 188  GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            GY    + DK L  FR+M + G   DE   T+ + AC  L ++  G QIH     SGF  
Sbjct: 525  GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-- 582

Query: 248  SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            S       +LV  Y +CG + E+   F+  E    I+W++L+ G+ Q  N  EA+ +F +
Sbjct: 583  SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642

Query: 308  LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
            +    +  + F   S +   ++ A ++QGKQ+HA   K     +T V N+++ MY KCG 
Sbjct: 643  MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 702

Query: 368  IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            I +A + F E+  KN V+W  II  Y KHG   EA+  F +M+  +V P+ V  + VLSA
Sbjct: 703  ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 762

Query: 428  CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            CSH GLV++   YF  + ++  + P+ EHY C+VD L RAG L  AK  I+ MP+KP   
Sbjct: 763  CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 822

Query: 488  IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            +W+TLLSAC VH ++E+G      LL L+ ++   YV++SN++A +  W+  +  R+  +
Sbjct: 823  VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 882

Query: 548  SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
             KG+KK  G+SW+EV   IH FY GD  HPL ++IH+   ++ KR   E+G+V      L
Sbjct: 883  EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLL 941

Query: 608  HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSK 666
            +++Q E K+  + +HSEKLAI       GL   P  V I V KNLRVC DCH +IK +SK
Sbjct: 942  NELQHEQKDPIIFIHSEKLAISF-----GLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 996

Query: 667  ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +     +VRDA RFH FEGG CSC DYW
Sbjct: 997  VSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 246/483 (50%), Gaps = 21/483 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   N  LD G +LH  ++K+G   +  L+  L D Y   G++ GA  VFD+M ER + +
Sbjct: 54  CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 113

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM------- 133
           W  ++              LF +M S +V PNE T       SGVL +   G        
Sbjct: 114 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF------SGVLEACRGGSVAFDVVE 167

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QIH   +  G   + VV N +ID+YS+ G ++ A R+FD +  K   +W AMI+G     
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + + LF  M   G +P  + F+S L AC  + S+  G Q+HG ++  GF  S  T +
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYV 285

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LV  Y   G L+ A  +F  + Q+  +++++LI G +Q     +AMELF+++    L
Sbjct: 286 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 345

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D   L+S++   +    + +G+Q+HAY  K+    +  +  +++++Y KC  I+ A +
Sbjct: 346 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 405

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F E  V+NVV W V++  YG     + +  +FR+M ++++ P+   Y ++L  C   G 
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 465

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           +E  ++  S++    +   ++  Y C  ++D   + G+LD A +++     K  ++ W T
Sbjct: 466 LELGEQIHSQII---KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTT 521

Query: 492 LLS 494
           +++
Sbjct: 522 MIA 524



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 257/519 (49%), Gaps = 9/519 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   ++  D   Q+H  ++  G     ++ N LID+Y++ G ++ A  VFD +  ++  S
Sbjct: 156 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G  +N      + LFC M    + P  +  S+ + A   + S+E G Q+HG+ +
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF  +  V N+++ +Y   G +  A  +F  M  +  +T+N +I G    GY +K + 
Sbjct: 276 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 335

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF++M   G  PD  T  S + AC + G++  G Q+H +    GF  + K  I G+L++ 
Sbjct: 336 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK--IEGALLNL 393

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KC  +  A   F   E ++V+ W+ +++ Y   ++L  +  +FRQ++   +  + +  
Sbjct: 394 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 453

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +E G+QIH+   K    L+  V + ++DMY K G +D A ++      
Sbjct: 454 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 513

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K+VV+WT +I GY ++    +A+  FR+ML   +  D V     +SAC+    ++E Q+ 
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++ C        +   + +V    R G+++E+    E      +IA W  L+S  +  G
Sbjct: 574 HAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSG 631

Query: 501 DLELGREVGEILLRL--DGDNPVNYVMMSNIHADAGSWN 537
           + E   E   + +R+  +G +  N+   S + A + + N
Sbjct: 632 NNE---EALRVFVRMNREGIDNNNFTFGSAVKAASETAN 667



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 240/482 (49%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C K   L+ G QLHG ++K+GFS D  + N L+ +Y   G +  A  +F  M +R+ 
Sbjct: 255 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 314

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V++  L+ G  Q G  +  + LF +M    ++P+  TL++ + A     ++  G Q+H  
Sbjct: 315 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 374

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K GF  N  +  +++++Y+KC  I  A   F     ++++ WN M+  Y L       
Sbjct: 375 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 434

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +FR+MQ    +P+++T+ S LK C  LG +  G QIH  +I + F   +   +   L+
Sbjct: 435 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVCSVLI 492

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A  +      K V+SW+++I GY Q     +A+  FRQ+ +R ++ D  
Sbjct: 493 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 552

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L++ +   A    +++G+QIHA A       D    N++V +Y +CG I+E+   F + 
Sbjct: 553 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 612

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              + + W  +++G+ + G  +EA+ +F +M  + ++ +   + + + A S +  +++ +
Sbjct: 613 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 672

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  + +          E  + ++    + G + +A+     +  K  ++ W  +++A   
Sbjct: 673 QVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSK 730

Query: 499 HG 500
           HG
Sbjct: 731 HG 732


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/679 (37%), Positives = 396/679 (58%), Gaps = 18/679 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           C  + L    G  + G ++K GF   D+ +   LIDM+A+ G++  A  VFD ++ER  V
Sbjct: 153 CFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSV 212

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
            WT L+  ++Q G A   + LF  M     +P+ +++S+ I A   L SV  G Q+H + 
Sbjct: 213 VWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVA 272

Query: 140 MKSGFEWNPVVGNSIIDMYSKCG---RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           ++ G   +  V   ++DMY+K      +  A ++F  MP  ++++W A+I+GYV +G  +
Sbjct: 273 LRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQE 332

Query: 197 KGLL-LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
             ++ LFR+M      P+  T+++ LKAC +L     G QIH  ++ +   +    V+  
Sbjct: 333 NNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHV--NVVGN 390

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y + GC+ EAR+ FD + + +++S S  +     E N A        + +    V
Sbjct: 391 ALVSMYAESGCMEEARKAFDQLYETNILSMSPDV---ETERNNASCSSKIEGMDD---GV 444

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
             F  +S++   A   L+ +G+++HA + K     D  +SNS+V MY +CG +++A   F
Sbjct: 445 STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAF 504

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +EM   NV++WT II+G  KHG AK+A+ +F  M+L  V+P+ V Y+AVLSACSH GLV+
Sbjct: 505 DEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVK 564

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E +E+F  +  D  + PR+EHY+CIVD L R+G ++EA+  I  MP K    +W+TLLSA
Sbjct: 565 EGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR +G+ E+G      ++ L+  +P  YV++SN++ADAG W+E  R+R L R K L K  
Sbjct: 625 CRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKET 684

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW++V   IH F  GD +HPL   I+  L+ + + +K ++G+V      LHD+ EE K
Sbjct: 685 GLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIK-DIGYVPDTSIVLHDMSEELK 743

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEK+A+   L+         K +R+FKNLRVC DCH  IK +SK      ++R
Sbjct: 744 EQYLLQHSEKIAVAFGLI----TTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILR 799

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+ RFHR + G+CSCG+YW
Sbjct: 800 DSNRFHRMKDGICSCGEYW 818



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 255/528 (48%), Gaps = 63/528 (11%)

Query: 28  LDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALM 85
           L  G  LH  L++      D ++ N L+ MY+KCG +  A  VFD+M   R++VSWTA+ 
Sbjct: 56  LRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMA 115

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA--SGVLSSVENGMQIHGMCMKSG 143
               +NG  +  L L  +M    ++PN FTL    +A     L  +  G+ + G  +K+G
Sbjct: 116 SCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV-VLGFVLKTG 174

Query: 144 FEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           F    V VG ++IDM+++ G +  A R+FD +  ++ + W  +I  YV AG + K + LF
Sbjct: 175 FWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELF 234

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
             M + G  PD ++ +S + AC  LGSV  G Q+H   +  G      + ++  LVD Y 
Sbjct: 235 LHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSD--SCVSCGLVDMYA 292

Query: 263 KCG---CLVEARRVFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQVD 316
           K      +  AR+VF  + + +V+SW++LI GY Q   +EN    M LFR++   S++ +
Sbjct: 293 KLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQEN--NVMALFREMLNESIRPN 350

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               S+++   A+ +  + G+QIHA+  K        V N++V MY + G ++EA + F+
Sbjct: 351 HITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFD 410

Query: 377 EMPVKNVVTWTVII-TGYGKHGLAKEAVGLFRKMLLDDVEPDGVA---YLAVLSACSHSG 432
           ++   N+++ +  + T       + +  G+           DGV+   + ++LSA +  G
Sbjct: 411 QLYETNILSMSPDVETERNNASCSSKIEGM----------DDGVSTFTFASLLSAAASVG 460

Query: 433 LVEESQE----------------------------YFSRLCN--DKRMKPRIEHYSCIVD 462
           L+ + Q+                            Y    C   D+     +  ++ I+ 
Sbjct: 461 LLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIIS 520

Query: 463 SLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGRE 507
            L + G   +A ++   M    VKP+   +  +LSAC   G ++ G+E
Sbjct: 521 GLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE 568



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 8/272 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+     D G Q+H  ++K   +   ++ N L+ MYA+ G M  A   FD++ E N+
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNI 417

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +S +          N  +C S    M       + FT ++ + A+  +  +  G ++H +
Sbjct: 418 LSMSP---DVETERNNASCSSKIEGMDDG---VSTFTFASLLSAAASVGLLTKGQKLHAL 471

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            MK+GF  +  + NS++ MY++CG + +A R FD M   ++I+W ++I+G    GY+ + 
Sbjct: 472 SMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQA 531

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F  M   G  P++ T+ + L AC  +G V  G + H   +        +      +V
Sbjct: 532 LSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLLPRMEHYACIV 590

Query: 259 DFYVKCGCLVEARRVFDLIEQKS-VISWSSLI 289
           D   + G + EAR+  + +  K+  + W +L+
Sbjct: 591 DLLARSGLVEEARQFINEMPCKADALVWKTLL 622


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/671 (38%), Positives = 397/671 (59%), Gaps = 15/671 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G Q+H   +K+G    L ++N LI+MY K  +   A  VFD M ER+++SW +++ G
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM----QIHGMCMKSG 143
             QNG     + LF Q+    +KP+++T+++ +KA+   SS+  G+    Q+H   +K  
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA---SSLPEGLSLSKQVHVHAIKIN 447

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
              +  V  ++ID YS+   + EA  +F+      L+ WNAM+AGY  +    K L LF 
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFA 506

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            M + GE  D+FT  +  K CG L ++  G Q+H + I SG  Y +   ++  ++D YVK
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG--YDLDLWVSSGILDMYVK 564

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG +  A+  FD I     ++W+++I G  +      A  +F Q+R   +  D F ++++
Sbjct: 565 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 624

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
               +    +EQG+QIHA A K+    D  V  S+VDMY KCG ID+A  LF  + + N+
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
             W  ++ G  +HG  KE + LF++M    ++PD V ++ VLSACSHSGLV E+ ++   
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 744

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +  D  +KP IEHYSC+ D+LGRAG + +A+NLIESM ++ S ++++TLL+ACRV GD E
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
            G+ V   LL L+  +   YV++SN++A A  W+E +  R + +   +KK  G SW+EV 
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 864

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
            +IH F   D ++  TE I++ + +M + +K+E G+V    + L D++EE KE +L  HS
Sbjct: 865 NKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERALYYHS 923

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLA+   L    L+  P   IRV KNLRVCGDCH  +K ++K+     V+RDA RFHRF
Sbjct: 924 EKLAVAFGL----LSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979

Query: 684 EGGVCSCGDYW 694
           + G+CSCGDYW
Sbjct: 980 KDGICSCGDYW 990



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 239/486 (49%), Gaps = 32/486 (6%)

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +L +G   A L  F  M  S V+ ++ T    +  +  + S+  G Q+H M +K G +  
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V NS+I+MY K  +   A  +FD M  + LI+WN++IAG    G   + + LF ++  
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409

Query: 208 HGEIPDEFTFTSTLKACGSLG---SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            G  PD++T TS LKA  SL    S+     +H   I +       + ++ +L+D Y + 
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN----VSDSFVSTALIDAYSRN 465

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            C+ EA  +F+      +++W++++ GY Q  +  + ++LF  + ++  + D F L+++ 
Sbjct: 466 RCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
                   + QGKQ+HAYA K    LD  VS+ I+DMY+KCG +  A   F+ +PV + V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD--GVAYLAVLSACSHSGLVEESQEYFS 442
            WT +I+G  ++G  + A  +F +M L  V PD   +A LA  S+C  + L +  Q + +
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHAN 643

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD- 501
            L  +    P +   + +VD   + G +D+A  L + + +  +I  W  +L     HG+ 
Sbjct: 644 ALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEG 700

Query: 502 ---LELGREVGEILLRLDGDNPVN--------------YVMMSNIHADAGSWNECERLRK 544
              L+L +++  + ++ D    +               Y  M ++H D G   E E    
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760

Query: 545 LARSKG 550
           LA + G
Sbjct: 761 LADALG 766



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 123/217 (56%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA   + C     ++ G Q+H   +K G+  DL +++ ++DMY KCG+M+ A   FD + 
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V+WT ++ G ++NG  +    +F QM    V P+EFT++T  KAS  L+++E G Q
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K     +P VG S++DMY+KCG I++A  +F  +   ++  WNAM+ G    G 
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
             + L LF++M+  G  PD+ TF   L AC   G V 
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 47/415 (11%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           S +L+L  G   H  ++    + +  L N+LI MY+KCG +  A  VFDKM +R++VSW 
Sbjct: 52  SSDLML--GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN 109

Query: 83  ALMCGFLQNG-----NAKACLSLFCQMGSSSVKPNEFTLSTNIK---ASGVLSSVENGMQ 134
           +++  + Q+      N +    LF  +    V  +  TLS  +K    SG + + E+   
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES--- 166

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG   K G + +  V  +++++Y K G++ E   +F+ MP + ++ WN M+  Y+  G+
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ + L       G  P+E T     +  G     G                 VK+   
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG----------------QVKSFAN 270

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G+            +A  V ++I +   +S       Y      +  ++ F  + E  ++
Sbjct: 271 GN------------DASSVSEIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVE 312

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D      M+        +  G+Q+H  A K+   L  +VSNS+++MY K      A  +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           F+ M  +++++W  +I G  ++GL  EAV LF ++L   ++PD     +VL A S
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 217/519 (41%), Gaps = 39/519 (7%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           + R  L+  L+ C  +  +      HG   K+G   D  +   L+++Y K G++     +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F++M  R+VV W  ++  +L+ G  +  + L     SS + PNE TL    + SG  S  
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDA 262

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
                                           G++   A   D      +I  N  ++ Y
Sbjct: 263 --------------------------------GQVKSFANGNDASSVSEIIFRNKGLSEY 290

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           + +G     L  F  M E     D+ TF   L     + S+  G Q+H   +  G    +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL--DL 348

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              ++ SL++ Y K      AR VFD + ++ +ISW+S+I G AQ     EA+ LF QL 
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408

Query: 310 ERSLQVDGFVLSSMMGVFADFAL-VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
              L+ D + ++S++   +     +   KQ+H +A K+ +  D+ VS +++D Y +   +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            EA  LF E    ++V W  ++ GY +     + + LF  M       D      V   C
Sbjct: 469 KEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
                + + ++  +           +   S I+D   + G +  A+   +S+PV   +A 
Sbjct: 528 GFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA- 585

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           W T++S C  +G+ E    V    +RL G  P  + + +
Sbjct: 586 WTTMISGCIENGEEERAFHVFS-QMRLMGVLPDEFTIAT 623



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 43/257 (16%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GK  HA         +  + N+++ MY KCG +  A  +F++MP +++V+W  I+  Y +
Sbjct: 58  GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117

Query: 396 HGLA-----KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN---- 446
                    ++A  LFR +  D V    +    +L  C HSG V  S+ +    C     
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177

Query: 447 -DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D+ +         +V+   + G++ E K L E MP +  + +W  +L A      LE+G
Sbjct: 178 GDEFVA------GALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAY-----LEMG 225

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
            +   I L             S  H+   + NE   LR LAR  G    AG        +
Sbjct: 226 FKEEAIDLS------------SAFHSSGLNPNEIT-LRLLARISGDDSDAG--------Q 264

Query: 566 IHFFYGGDDTHPLTEKI 582
           +  F  G+D   ++E I
Sbjct: 265 VKSFANGNDASSVSEII 281


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/694 (36%), Positives = 408/694 (58%), Gaps = 7/694 (1%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MNR+   L+++     + L+ C K   L    Q+H  ++K     +  + N+L+ +Y +C
Sbjct: 17  MNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIEC 76

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VFD +++++  SW A++ G++++ +A+  + LF +M    V+PN  T    +
Sbjct: 77  GRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIIL 136

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   LS+++ G ++H      G E +  VG +++ MY KCG INEA R+FD +    +I
Sbjct: 137 KACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDII 196

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W  MI  Y  +G   +   L  +M++ G  P+  T+ S L AC S G++    ++H   
Sbjct: 197 SWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHA 256

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           + +G    V+  +  +LV  Y K G + +AR VFD ++ + V+SW+ +I  +A+     E
Sbjct: 257 LDAGLELDVR--VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE 314

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A +LF Q++    + D  +  S++   A    +E  K+IH +A      +D  V  ++V 
Sbjct: 315 AYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVH 374

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY K G ID+A  +F+ M V+NVV+W  +I+G  +HGL ++A+ +FR+M    V+PD V 
Sbjct: 375 MYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVT 434

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           ++AVLSACSH+GLV+E +  +  +     ++P + H +C+VD LGRAGRL EAK  I++M
Sbjct: 435 FVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNM 494

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
            V P  A W  LL +CR +G++ELG  V +  L+LD  N   YV++SNI+A+AG W+   
Sbjct: 495 AVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVS 554

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            +R + R +G++K  GRSW+EVD +IH F   D +HP  ++I++   ++ +++K E G++
Sbjct: 555 WVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAE-GYI 613

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
              +  L +   + KE  +  HSEKLAI    V G ++  PG  IRVFKNLRVC DCH  
Sbjct: 614 PDTRLVLKNKNMKDKELDICSHSEKLAI----VYGLMHTPPGNPIRVFKNLRVCTDCHGA 669

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K +SK+     +VRDA RFH F+ GVCSCGDYW
Sbjct: 670 TKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 187/362 (51%), Gaps = 12/362 (3%)

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S+  ++L  ++Q  G I D F +   LK C     +    Q+H  +I S    +    + 
Sbjct: 10  SEAIVVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAH--VM 66

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y++CG L EAR VFD + +KS  SW+++I GY + ++  +AM LFR++    +Q
Sbjct: 67  NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +      ++   A  + ++ GK++HA         D  V  +++ MY KCG I+EA  +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+ +   ++++WTV+I  Y + G  KEA  L  +M  +  +P+ + Y+++L+AC+  G +
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +  +    R   D  ++  +   + +V    ++G +D+A+ + + M V+  ++ W  ++ 
Sbjct: 247 KWVKR-VHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WNVMIG 304

Query: 495 ACRVHGDLELGREVGEILLRLDGD----NPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           A   HG    G E  ++ L++  +    + + ++ + N  A AG+    +++ + A   G
Sbjct: 305 AFAEHGR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSG 361

Query: 551 LK 552
           L+
Sbjct: 362 LE 363


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/676 (37%), Positives = 398/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  ++ G Q+H  +V+MG+  D+   N L+DMY K G ++ A  +F+KM + +V
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL+ G + NG+    + L  QM  S + PN FTLS+ +KA     + + G QIHG 
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + +  +G  ++DMY+K   +++A ++FD M  + LI  NA+I+G    G  D+ 
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF ++++ G   +  T  + LK+  SL +     Q+H   +  GF +    V    L+
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV--NGLI 446

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL +A RVF+      +I+ +S+I   +Q ++   A++LF ++  + L+ D F
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           VLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+ +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P + VV+W+ +I G  +HG  K A+ LF +M+ + + P+ +   +VL AC+H+GLV+E++
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF+ +     +    EHYSC++D LGRAG+LD+A  L+ SMP + + +IW  LL A RV
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D ELG+   E L  L+ +    +V+++N +A AG WNE  ++RKL +   +KK    S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV  ++H F  GD +HP+T++I+  L+E+   M +  GFV  V   LHD+    KE  
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA-GFVPNVDVDLHDLDRSEKELL 805

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+  AL    L+  PG  IRV KNLR+C DCH   K +SKI+    ++RD  
Sbjct: 806 LSHHSERLAVAFAL----LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDIN 861

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 862 RFHHFRDGTCSCGDYW 877



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 264/502 (52%), Gaps = 11/502 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGFL 89
           G Q+H   +  GF  D+ + N L+ MY   G M+ A  VF++   ERN VSW  LM  ++
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +N      + +F +M  S ++P EF  S  + A     ++E G Q+H M ++ G++ +  
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             N+++DMY K GR++ A+ +F+ MP   +++WNA+I+G VL G+  + + L  +M+  G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +P+ FT +S LKAC   G+   G QIHGF+I +         I   LVD Y K   L +
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN--ADSDDYIGVGLVDMYAKNHFLDD 356

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VFD +  + +I  ++LI G +      EA+ LF +LR+  L V+   L++++   A 
Sbjct: 357 ARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTAS 416

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                  +Q+HA A K+    D  V N ++D Y KC  + +A  +F E    +++  T +
Sbjct: 417 LEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSM 476

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           IT   +    + A+ LF +ML   +EPD     ++L+AC+     E+ ++  + L   + 
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           M       + +V +  + G +++A+    S+P +  ++ W  ++     HG    G+   
Sbjct: 537 MSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRAL 591

Query: 510 EILLRL--DGDNPVNYVMMSNI 529
           E+  R+  +G NP N++ M+++
Sbjct: 592 ELFGRMVDEGINP-NHITMTSV 612



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 8/393 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV     L+  L+ CS     D G Q+HG ++K     D  +   L+DMYAK   ++ A 
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD M  R+++   AL+ G    G     LSLF ++    +  N  TL+  +K++  L 
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +     Q+H + +K GF ++  V N +ID Y KC  +++A R+F+   +  +I   +MI 
Sbjct: 419 AASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT 478

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
                 + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI   F  
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF-- 536

Query: 248 SVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +    AG +LV  Y KCG + +A   F  + ++ V+SWS++I G AQ  +   A+ELF 
Sbjct: 537 -MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           ++ +  +  +   ++S++       LV++ K+ +  + K   G+D +  +   ++D+  +
Sbjct: 596 RMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            G +D+A EL N MP + N   W  ++     H
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 12/402 (2%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  LH +L+K G   SF     N LI  Y+KC     A  VFD++ +   VSW++L+  +
Sbjct: 23  GAHLHASLLKSGSLASF----RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAY 78

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             NG  ++ +  F  M +  V  NEF L   +K    +     G Q+H M M +GF  + 
Sbjct: 79  SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSDV 135

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            V N+++ MY   G +++A R+F+   + ++ ++WN +++ YV        + +F +M  
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW 195

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P EF F+  + AC    ++  G Q+H  ++  G+   V T  A +LVD Y+K G +
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT--ANALVDMYMKMGRV 253

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A  +F+ +    V+SW++LI G     +   A+EL  Q++   L  + F LSS++   
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +     + G+QIH +  K  +  D  +   +VDMY K   +D+A ++F+ M  ++++   
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            +I+G    G   EA+ LF ++  + +  +     AVL + +
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 22/300 (7%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M+  G I  + T  +  +A      +  G  +H  L+ SG   S +      L+ FY KC
Sbjct: 1   MRSAGTISQQLTRYAAAQA------LLPGAHLHASLLKSGSLASFRN----HLISFYSKC 50

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
                ARRVFD I     +SWSSL+  Y+       A++ F  +R   +  + F L  ++
Sbjct: 51  RRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNV 383
               D  L   G Q+HA A     G D  V+N++V MY   G +D+A  +FNE    +N 
Sbjct: 111 KCVPDARL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNA 167

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS- 442
           V+W  +++ Y K+    +A+ +F +M+   ++P    +  V++AC+ S  +E  ++  + 
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAM 227

Query: 443 --RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R+  DK     +   + +VD   + GR+D A  + E MP    +  W  L+S C ++G
Sbjct: 228 VVRMGYDK----DVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNG 282


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/688 (37%), Positives = 400/688 (58%), Gaps = 8/688 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++ +   LA  ++  +K   L  G QLH  L+  G++    L N L++MY+KCGE++ A 
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD M +RN+VSWTA++ G  QN      +  FC M      P +F  S+ I+A   L 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+E G Q+H + +K G      VG+++ DMYSKCG + +A ++F+ MP K  ++W AMI 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G  ++ LL F+KM +     D+    STL ACG+L +   G  +H  ++  GF  
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDL-IEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +   +  +L D Y K G +  A  VF +  E ++V+S++ LI GY + E + + + +F 
Sbjct: 241 DI--FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 298

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +LR + ++ + F  SS++   A+ A +EQG Q+HA   K+    D  VS+ +VDMY KCG
Sbjct: 299 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG 358

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L+++A + F+E+     + W  +++ +G+HGL K+A+ +F +M+   V+P+ + ++++L+
Sbjct: 359 LLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLT 418

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            CSH+GLVEE  +YF  +     + P  EHYSC++D LGRAGRL EAK  I  MP +P+ 
Sbjct: 419 GCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNA 478

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
             W + L ACR+HGD E+G+   E L++L+  N    V++SNI+A+   W +   +R   
Sbjct: 479 FGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRM 538

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           R   +KK+ G SWV+V  + H F   D +HP    I++ L  +  ++K   G+V      
Sbjct: 539 RDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAA-GYVPRTDSV 597

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
             D+ +  KE+ L  HSE++A+  AL+   +    GK I V KNLRVC DCH  IK +SK
Sbjct: 598 PLDMDDSMKEKLLHRHSERIAVAFALISMPI----GKPIIVKKNLRVCVDCHSAIKFISK 653

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +     +VRD +RFH F  G CSCGDYW
Sbjct: 654 VTGRKIIVRDNSRFHHFTDGSCSCGDYW 681


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/676 (37%), Positives = 398/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  ++ G Q+H  +V+MG+  D+   N L+DMY K G ++ A  +F+KM + +V
Sbjct: 209 VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL+ G + NG+    + L  QM  S + PN FTLS+ +KA     + + G QIHG 
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + +  +G  ++DMY+K   +++A ++FD M  + LI  NA+I+G    G  D+ 
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEA 388

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF ++++ G   +  T  + LK+  SL +     Q+H   +  GF +    V    L+
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV--NGLI 446

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL +A RVF+      +I+ +S+I   +Q ++   A++LF ++  + L+ D F
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           VLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+ +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P + VV+W+ +I G  +HG  K A+ LF +M+ + + P+ +   +VL AC+H+GLV+E++
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF+ +     +    EHYSC++D LGRAG+LD+A  L+ SMP + + +IW  LL A RV
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D ELG+   E L  L+ +    +V+++N +A AG WNE  ++RKL +   +KK    S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV  ++H F  GD +HP+T++I+  L+E+   M +  GFV  V   LHD+    KE  
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA-GFVPNVDVDLHDLDRSEKELL 805

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+  AL    L+  PG  IRV KNLR+C DCH   K +SKI+    ++RD  
Sbjct: 806 LSHHSERLAVAFAL----LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDIN 861

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 862 RFHHFRDGTCSCGDYW 877



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 264/502 (52%), Gaps = 11/502 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGFL 89
           G Q+H   +  GF  D+ + N L+ MY   G M+ A  VF++   ERN VSW  LM  ++
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +N      + +F +M  S ++P EF  S  + A     ++E G Q+H M ++ G++ +  
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             N+++DMY K GR++ A+ +F+ MP   +++WNA+I+G VL G+  + + L  +M+  G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +P+ FT +S LKAC   G+   G QIHGF+I +         I   LVD Y K   L +
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKAN--ADSDDYIGVGLVDMYAKNHFLDD 356

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VFD +  + +I  ++LI G +      EA+ LF +LR+  L V+   L++++   A 
Sbjct: 357 ARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTAS 416

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                  +Q+HA A K+    D  V N ++D Y KC  + +A  +F E    +++  T +
Sbjct: 417 LEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSM 476

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           IT   +    + A+ LF +ML   +EPD     ++L+AC+     E+ ++  + L   + 
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           M       + +V +  + G +++A+    S+P +  ++ W  ++     HG    G+   
Sbjct: 537 MSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRAL 591

Query: 510 EILLRL--DGDNPVNYVMMSNI 529
           E+  R+  +G NP N++ M+++
Sbjct: 592 ELFGRMVDEGINP-NHITMTSV 612



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 8/393 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV     L+  L+ CS     D G Q+HG ++K     D  +   L+DMYAK   ++ A 
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD M  R+++   AL+ G    G     LSLF ++    +  N  TL+  +K++  L 
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +     Q+H + +K GF ++  V N +ID Y KC  +++A R+F+   +  +I   +MI 
Sbjct: 419 AASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT 478

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
                 + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI   F  
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF-- 536

Query: 248 SVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +    AG +LV  Y KCG + +A   F  + ++ V+SWS++I G AQ  +   A+ELF 
Sbjct: 537 -MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFG 595

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           ++ +  +  +   ++S++       LV++ K+ +  + K   G+D +  +   ++D+  +
Sbjct: 596 RMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDLLGR 654

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            G +D+A EL N MP + N   W  ++     H
Sbjct: 655 AGKLDDAMELVNSMPFQANASIWGALLGASRVH 687



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 202/402 (50%), Gaps = 12/402 (2%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  LH +L+K G   SF     N LI  Y+KC     A   FD++ +   VSW++L+  +
Sbjct: 23  GAHLHASLLKSGSLASF----RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAY 78

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             NG  ++ +  F  M +  V  NEF L   +K    +     G Q+H M M +GF  + 
Sbjct: 79  SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSDV 135

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            V N+++ MY   G +++A R+F+   + ++ ++WN +++ YV        + +F +M  
Sbjct: 136 FVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW 195

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P EF F+  + AC    ++  G Q+H  ++  G+   V T  A +LVD Y+K G +
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT--ANALVDMYMKMGRV 253

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A  +F+ +    V+SW++LI G     +   A+EL  Q++   L  + F LSS++   
Sbjct: 254 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +     + G+QIH +  K  +  D  +   +VDMY K   +D+A ++F+ M  ++++   
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCN 373

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            +I+G    G   EA+ LF ++  + +  +     AVL + +
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 157/319 (49%), Gaps = 8/319 (2%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           T+S  +       ++  G  +H   +KSG   +    N +I  YSKC R   A R FD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEI 63

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P    ++W++++  Y   G     +  F  M+  G   +EF     LK    +     G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGA 120

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYA 293
           Q+H   + +GF   V   +A +LV  Y   G + +ARRVF+  + +++ +SW+ L+  Y 
Sbjct: 121 QVHAMAMATGFGSDV--FVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           + +   +A+++F ++    +Q   F  S ++        +E G+Q+HA   ++    D  
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
            +N++VDMY+K G +D A+ +F +MP  +VV+W  +I+G   +G    A+ L  +M    
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298

Query: 414 VEPDGVAYLAVLSACSHSG 432
           + P+     ++L ACS +G
Sbjct: 299 LVPNVFTLSSILKACSGAG 317



 Score = 45.8 bits (107), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 4/156 (2%)

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H +A+ + SG   S  N ++  Y KC     A   F+E+P    V+W+ ++T Y  +GL 
Sbjct: 25  HLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLP 84

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           + A+  F  M  + V  +  A   VL     + L  +       +         +   + 
Sbjct: 85  RSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHA----MAMATGFGSDVFVANA 140

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +V   G  G +D+A+ +      + +   W  L+SA
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/680 (36%), Positives = 399/680 (58%), Gaps = 9/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C   + +  GV +HG + K+G + D+++ N L+ MY K   +  A  VF KM 
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ V+W  ++CG+ Q G  +A + LF  M    V P+  ++++ I+A G    ++ G  
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKF 343

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   + SGFE + V  N +IDMY+KCG +  A  +FD    K  +TWN++I GY  +GY
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             +GL  F+ M+   + PD  TF   L     L  +  G  IH  +I  GF    + +I 
Sbjct: 404 YKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF--EAELIIG 460

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SL+D Y KCG + +  +VF  +    +ISW+++I      ++     ++  ++R   L 
Sbjct: 461 NSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLM 520

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   +  ++ + +  A+  QGK+IH Y  K     +  + N++++MY KCG ++   ++
Sbjct: 521 PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKV 580

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  M  K+VVTWT +I+ +G +G  K+A+  F+ M L  V PD VA++A + ACSHSG+V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E   +F R+  D  ++PR+EHY+C+VD L R+G L +A+  I SMP+KP  ++W  LLS
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR  G+  + + V + +L L+ D+   YV++SNI+A  G W++ + +R   ++KGLKK 
Sbjct: 701 ACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKE 760

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+E+ K ++ F  GD +    +K+  +L  + + M +E G+V  +++ALHD++E+ 
Sbjct: 761 PGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKE-GYVADLQFALHDVEEDD 819

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K + L  HSE+LAI   L    LN +PG  + V KNLRVCGDCH   K ++KI++   +V
Sbjct: 820 KRDMLCGHSERLAIAFGL----LNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILV 875

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFHRF+ G CSCGD+W
Sbjct: 876 RDANRFHRFKDGACSCGDHW 895



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 255/484 (52%), Gaps = 8/484 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C++ L L+ G  +H   ++MGF  DL + N LIDMY++  +++ A  VF++M  R+ 
Sbjct: 128 INSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS 187

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+  NG  +  L ++ +   + + P+ FT+S+ + A G L +V+ G+ +HG+
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV 247

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K G   + ++GN ++ MY K  R+ EA R+F  M  K  +TWN MI GY   G  +  
Sbjct: 248 IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEAS 307

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF  M + G +PD  + TST++ACG  G +  G  +H +LI SGF     TV    L+
Sbjct: 308 VKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF--ECDTVACNILI 364

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDG 317
           D Y KCG L+ A+ VFD  + K  ++W+SLI GY Q     E +E F+ ++ ER      
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVT 424

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           FVL  ++ +F+  A + QG+ IH    K     +  + NS++D+Y KCG +D+  ++F+ 
Sbjct: 425 FVL--LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSY 482

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M   ++++W  +I              +  +M  + + PD    L +L  CS   +  + 
Sbjct: 483 MSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG 542

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +E    +      +  +   + +++   + G L+    + + M  K  +  W  L+SA  
Sbjct: 543 KEIHGYIFKSG-FESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFG 600

Query: 498 VHGD 501
           ++G+
Sbjct: 601 MYGE 604



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 235/476 (49%), Gaps = 22/476 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGFLQNG 92
           +H  ++  G S  ++ +  LI  YA+  +   + +VF  +    NV  W +++     NG
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L  + +M    ++P+ FT  + I +   +  +E G  +H   M+ GFE +  +GN
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++IDMYS+   ++ A  +F+ M  +  ++WN++I+GY   G+ +  L ++ K +  G +P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT +S L ACGSL +V  G  +HG +   G    V  +I   L+  Y K   L EARR
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV--IIGNGLLSMYFKFERLREARR 278

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV-----LSSMMGVF 327
           VF  +  K  ++W+++I GYAQ      +++LF  +      +DGFV     ++S +   
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM------IDGFVPDMLSITSTIRAC 332

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                ++ GK +H Y        DT   N ++DMY KCG +  A E+F+    K+ VTW 
Sbjct: 333 GQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWN 392

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I GY + G  KE +  F+ M ++  +PD V ++ +LS  S    + + +      C+ 
Sbjct: 393 SLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIH---CDV 448

Query: 448 KRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            +     E    + ++D   + G +D+   +   M     I+ W T++ A  VH D
Sbjct: 449 IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVI-ASSVHFD 502



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 9/422 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            V +   +  ++R C ++  L  G  +H  L+  GF  D +  N LIDMYAKCG++  A 
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD    ++ V+W +L+ G+ Q+G  K  L  F +M     KP+  T    +     L+
Sbjct: 378 EVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLA 436

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            +  G  IH   +K GFE   ++GNS++D+Y+KCG +++  ++F  M A  +I+WN +IA
Sbjct: 437 DINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
             V       G  +  +M+  G +PDE T    L  C  L     G +IHG++  SGF  
Sbjct: 497 SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFES 556

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           +V   I  +L++ Y KCG L    +VF  +++K V++W++LI  +       +A++ F+ 
Sbjct: 557 NVP--IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKC 365
           +    +  D     + +   +   +V++G +      K    L+  + +   +VD+  + 
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD-RMKTDYNLEPRMEHYACVVDLLARS 673

Query: 366 GLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           GL+ +A E    MP+K +   W  +++     G    A  + +K+L  ++  D   Y  +
Sbjct: 674 GLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL--ELNSDDTGYYVL 731

Query: 425 LS 426
           +S
Sbjct: 732 VS 733



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 209/445 (46%), Gaps = 17/445 (3%)

Query: 101 FCQMGSSSVKPN-EFTLSTNIKASGVLSSVENGMQ---IHGMCMKSGFEWNPVVGNSIID 156
           FC   +++ +P+ EF  S+ +K    LSS +N  Q   +H + + SG   + +    +I 
Sbjct: 6   FCSNFNNTPEPSQEFLRSSLLKT---LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLIS 62

Query: 157 MYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
            Y++      +  +F  + P  ++  WN++I      G   + L  + +M+E    PD F
Sbjct: 63  KYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAF 122

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           TF S + +C  +  +  G  +H   +  GF   +   I  +L+D Y +   L  AR VF+
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDL--YIGNALIDMYSRFVDLDNARYVFE 180

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  +  +SW+SLI GY       +A++++ + R   +  D F +SS++        V++
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G  +H    K+    D  + N ++ MY K   + EA  +F++M VK+ VTW  +I GY +
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
            G  + +V LF  M +D   PD ++  + + AC  SG ++  +     L          +
Sbjct: 301 LGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF---ECD 356

Query: 456 HYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
             +C  ++D   + G L  A+ + ++   K S+  W +L++     G  + G E  +++ 
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT-WNSLINGYTQSGYYKEGLESFKMMK 415

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNE 538
                + V +V++ +I +     N+
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQ 440


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/727 (35%), Positives = 424/727 (58%), Gaps = 56/727 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           L+ C +   L +G  +H  +   G   ++ + N ++ MY +CG ++ A  +FD++LER  
Sbjct: 134 LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI 193

Query: 77  -NVVSWTALMCGFLQNGNAKACLSLFCQMG---SSSVKPNEFTLSTNIKASGVLSSVENG 132
            ++VSW +++  ++Q G ++  L +  +MG   S  ++P+  TL   + A   + ++++G
Sbjct: 194 EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHG 253

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--- 189
            Q+HG  +++G   +  VGN+++ MY+KC ++NEA ++F+ +  K +++WNAM+ GY   
Sbjct: 254 KQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313

Query: 190 ---------------------------VLAGYSDKG-----LLLFRKMQEHGEIPDEFTF 217
                                      V+AGY+ KG     L +FR+MQ +G  P+  T 
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITS--GFPYSVKT---VIAGSLVDFYVKCGCLVEARR 272
            S L  C S+G++  G Q H ++I +     ++ K    ++   L+D Y KC     AR 
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433

Query: 273 VFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQL--RERSLQVDGFVLSSMMGVFA 328
           +FD IE   K+V++W+ +I GYAQ     +A++LF Q+  ++ SL+ + F LS  +   A
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493

Query: 329 DFALVEQGKQIHAYAAKVPSGLDT-SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
               +  G+Q+HAYA +  +  +   V N ++DMY K G ID A  +F+ M ++NVV+WT
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWT 553

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++TGYG HG  +EA+ LF +M       DG+ +L VL ACSHSG+V++   YF  +   
Sbjct: 554 SLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKG 613

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P  EHY+C+VD LGRAGRL+EA  LI++M ++P+  +W  LLSA R+H ++ELG  
Sbjct: 614 FGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEY 673

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
               L  L  +N  +Y ++SN++A+A  W +  R+R L +  G++K  G SW++  K   
Sbjct: 674 AASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTT 733

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F+ GD +HP +E+I+ +L+++ KR+K ++G+V    +ALHD+ +E K + L  HSEKLA
Sbjct: 734 TFFVGDRSHPESEQIYNLLLDLIKRIK-DMGYVPQTSFALHDVDDEEKGDLLFEHSEKLA 792

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +      G L   PG+ IR+ KNLR+CGDCH  +  +S I+    V+RD++RFH F+ G 
Sbjct: 793 VAY----GILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGS 848

Query: 688 CSCGDYW 694
           CSC  YW
Sbjct: 849 CSCRSYW 855



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 249/501 (49%), Gaps = 57/501 (11%)

Query: 54  IDMYAKCGEMNGACAVFDKMLERN--VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
           +  Y +CG    A ++  +++  +  V  W AL+   ++ G     L  +CQM      P
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           + +T    +KA G + S+ +G  +H +   +G   N  + NSI+ MY +CG +++A +MF
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 172 D-VMPAK--SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI---PDEFTFTSTLKACG 225
           D V+  K   +++WN+++A YV  G S   L +  +M  H  +   PD  T  + L AC 
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           S+ ++  G Q+HGF + +G    V   +  +LV  Y KC  + EA +VF+ I++K V+SW
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDV--FVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSW 303

Query: 286 SSLILGYA---------------QEENLA--------------------EAMELFRQLRE 310
           ++++ GY+               QEE++                     EA+++FRQ++ 
Sbjct: 304 NAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQL 363

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL-------DTSVSNSIVDMYL 363
             L+ +   L+S++   A    +  GKQ HAY  K    L       D  V N ++DMY 
Sbjct: 364 YGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYA 423

Query: 364 KCGLIDEATELFN--EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD--DVEPDGV 419
           KC     A  +F+  E   KNVVTWTV+I GY +HG A +A+ LF ++      ++P+  
Sbjct: 424 KCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAF 483

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
                L AC+  G +   ++  +    ++     +   +C++D   ++G +D A+ + ++
Sbjct: 484 TLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDN 543

Query: 480 MPVKPSIAIWQTLLSACRVHG 500
           M ++ ++  W +L++   +HG
Sbjct: 544 MKLR-NVVSWTSLMTGYGMHG 563



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 208/445 (46%), Gaps = 51/445 (11%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N  S  L  +   L + L  C+    L +G Q+HG  V+ G   D+ + N L+ MYAKC 
Sbjct: 224 NHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCS 283

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK----------- 110
           +MN A  VF+ + +++VVSW A++ G+ Q G+  + LSLF  M    +K           
Sbjct: 284 KMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIA 343

Query: 111 ------------------------PNEFTLSTNIKASGVLSSVENGMQIHGMCMKS--GF 144
                                   PN  TL++ +     + ++  G Q H   +K+    
Sbjct: 344 GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 403

Query: 145 EWNP-----VVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDK 197
            WN      +V N +IDMY+KC     A  +FD +    K+++TW  MI GY   G ++ 
Sbjct: 404 NWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEAND 463

Query: 198 GLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            L LF ++  Q+    P+ FT +  L AC  LG +  G Q+H + + +     V   +  
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEV-LYVGN 522

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            L+D Y K G +  AR VFD ++ ++V+SW+SL+ GY       EA+ LF Q+++    V
Sbjct: 523 CLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAV 582

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           DG     ++   +   +V+QG  I+ +      G+     +   +VD+  + G ++EA E
Sbjct: 583 DGITFLVVLYACSHSGMVDQG-MIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAME 641

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHG 397
           L   M ++   V W  +++    H 
Sbjct: 642 LIKNMSMEPTAVVWVALLSASRIHA 666


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/680 (38%), Positives = 389/680 (57%), Gaps = 7/680 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            +A  L  C+    L  G+QLH   +K G S D++L   L+D+Y+KC ++  A   F    
Sbjct: 365  VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE 424

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              N+V W  ++  + Q  N      +F QM    + PN+FT  + ++    L ++  G Q
Sbjct: 425  TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K+GF+ N  V + +IDMY+K G++  A R+   +P   +++W AMIAGYV    
Sbjct: 485  IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
              + L LF +M+  G   D   F S + AC  + ++  G QIH     +GF   +   I 
Sbjct: 545  FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS--IN 602

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +L+  Y +CG + EA   F+ I  K+ ISW+SL+ G AQ     EA+++F ++     +
Sbjct: 603  NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662

Query: 315  VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            V+ F   S +   A  A ++QG+QIH+   K     +  VSNS++ +Y K G I +A   
Sbjct: 663  VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722

Query: 375  FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
            FN+M  +NV++W  +ITGY +HG   EA+ LF +M +  + P+ V ++ VLSACSH GLV
Sbjct: 723  FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782

Query: 435  EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +E  +YF  +     + P+ EHY C+VD LGRAG+LD A   I+ MP+     IW+TLLS
Sbjct: 783  KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842

Query: 495  ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            AC +H ++E+G      LL L+ ++   YV++SNI+A +  W   +  RKL + +G+KK 
Sbjct: 843  ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 902

Query: 555  AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
             GRSW+EV   +H FY GD  HPLT +I++ +  + +R   E+G+V      L++ ++  
Sbjct: 903  PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR-TSEIGYVQDSFSLLNESEQGQ 961

Query: 615  KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
            K+    VHSEKLAI   L+  G N  P   IRV KNLRVC DCH +IK +SKI     +V
Sbjct: 962  KDPITHVHSEKLAIAFGLLSLG-NNIP---IRVMKNLRVCNDCHNWIKYVSKISNRSIIV 1017

Query: 675  RDATRFHRFEGGVCSCGDYW 694
            RDA RFH F+GGVCSC D+W
Sbjct: 1018 RDAHRFHHFDGGVCSCKDFW 1037



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 262/503 (52%), Gaps = 14/503 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   ++  +Y  Q+H      GF    ++ N LID+Y+K G +  A  VF+ +  +++V+
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G  QNG  +  + LFC M +S + P  + LS+ + AS  +   E G Q+H + +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF     V N ++ +YS+  ++  A R+F  M ++  +++N++I+G V  G+SD+ L 
Sbjct: 289 KWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALE 348

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF KMQ     PD  T  S L AC S+G++  G Q+H   I +G   S   ++ GSL+D 
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGM--SADIILEGSLLDL 406

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KC  +  A + F   E ++++ W+ +++ Y Q +NL+++ E+FRQ++   +  + F  
Sbjct: 407 YSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +  G+QIH +  K    L+  V + ++DMY K G +  A  +   +P 
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVE 435
            +VV+WT +I GY +H +  EA+ LF +M    ++ D + + + +SAC+       G   
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
            +Q Y +    D  +       + ++    R GR+ EA    E +  K +I+ W +L+S 
Sbjct: 587 HAQSYAAGFGADLSIN------NALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639

Query: 496 CRVHGDLELGREVGEILLRLDGD 518
               G  E   +V   +LR + +
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAE 662



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 258/486 (53%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   +K  L + G QLH  ++K GF  +  + N L+ +Y++  ++  A  +F  M 
Sbjct: 264 LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ VS+ +L+ G +Q G +   L LF +M    +KP+  T+++ + A   + ++  GMQ
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G   + ++  S++D+YSKC  +  A + F     ++++ WN M+  Y     
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDN 443

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
                 +FR+MQ  G IP++FT+ S L+ C SLG++  G QIH  +I +GF  +V   + 
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV--YVC 501

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y K G L  A R+   + +  V+SW+++I GY Q +  +EA++LF ++  R +Q
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D    +S +   A    + QG+QIHA +     G D S++N+++ +Y +CG I EA   
Sbjct: 562 FDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLA 621

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F ++  KN ++W  +++G  + G  +EA+ +F +ML  + E +   Y + +SA +    +
Sbjct: 622 FEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANI 681

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ Q+  S +        R E  + ++    ++G + +A      M  +  I+ W  +++
Sbjct: 682 KQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREFNDMSERNVIS-WNAMIT 739

Query: 495 ACRVHG 500
               HG
Sbjct: 740 GYSQHG 745



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 237/471 (50%), Gaps = 9/471 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           ++LH  + K GF  + +L + L+D Y + G+ +GA  VFD+   R+V SW  ++  F+  
Sbjct: 78  MRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS-GVLSSVENGMQIHGMCMKSGFEWNPVV 150
            +      LF +M +  + PN +T +  +KA  G   +     Q+H      GF+ +P+V
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLV 197

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N +ID+YSK G I  A ++F+ +  K ++TW AMI+G    G  ++ +LLF  M     
Sbjct: 198 ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEI 257

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P  +  +S L A   +     G Q+H  +I  GF    +T +   LV  Y +   L+ A
Sbjct: 258 FPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF--HSETYVCNGLVALYSRSRKLISA 315

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F  +  +  +S++SLI G  Q+     A+ELF +++   L+ D   ++S++   A  
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASV 375

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             + +G Q+H++A K     D  +  S++D+Y KC  ++ A + F     +N+V W V++
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVML 435

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             YG+     ++  +FR+M ++ + P+   Y ++L  C+  G +   ++  + +    + 
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI---KT 492

Query: 451 KPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             ++  Y C  ++D   + G+L  A  ++  +P +  +  W  +++    H
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K + L   M+E G   +   +   L+ C + GS+    ++H  +  SGF    + ++  S
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF--DGEPLLIDS 98

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y + G    A +VFD    +SV SW+ +I  +  +++  +   LFR++    +  +
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158

Query: 317 GFVLSSMMG--VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEAT 372
           G+  + ++   V  D A     KQ+H  +     G D+S  V+N ++D+Y K G I+ A 
Sbjct: 159 GYTFAGVLKACVGGDIAF-NYVKQVH--SRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           ++FN + +K++VTW  +I+G  ++GL +EA+ LF  M   ++ P      +VLSA +   
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275

Query: 433 LVE--------------ESQEY--------FSR---LCNDKRMKPRIE-----HYSCIVD 462
           L E               S+ Y        +SR   L + +R+   +       Y+ ++ 
Sbjct: 276 LFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLIS 335

Query: 463 SLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREV 508
            L + G  D A  L   M    +KP      +LLSAC   G L  G ++
Sbjct: 336 GLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/685 (38%), Positives = 403/685 (58%), Gaps = 17/685 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD--LMLNNDLIDMYAK---CGEMNGACAVFDKM 73
           +R C K      G+ L G ++K G+ FD  + +  +LIDM+ K     ++  A  VFDKM
Sbjct: 163 IRACLKGGFFKTGLCLFGFVLKTGY-FDSHVCVGCELIDMFVKGCSLADLESARKVFDKM 221

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENG 132
            E+NVV+WT ++    Q G     + LF +M  SS   P+ FTL+  I     +  +  G
Sbjct: 222 REKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLG 281

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            ++H   ++SG   +  VG S++DMY+KCG + EA ++FD M   ++++W A++ GYV  
Sbjct: 282 KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRG 341

Query: 193 G--YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           G  Y  + + +F  M   G + P+ FTF+  LKAC SL     G Q+HG  I  G   S 
Sbjct: 342 GGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGL--SA 399

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              +   LV  Y K G +  AR+ FD++ +K+++S + +     ++ NL    +L R++ 
Sbjct: 400 IDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVE 459

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
                V  F  +S++   A    + +G+QIHA   K+    D SV+N+++ MY KCG  +
Sbjct: 460 YVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKE 519

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A ++FN+M   NV+TWT II G+ KHG A +A+ LF  ML   V+P+ V Y+AVLSACS
Sbjct: 520 AALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACS 579

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H GL++E+ ++F+ + ++  + PR+EHY+C+VD LGR+G L EA   I SMP      +W
Sbjct: 580 HVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVW 639

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           +T L +CRVH + +LG    +++L  +  +P  Y+++SN++A  G W +   +RK  + K
Sbjct: 640 RTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQK 699

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            + K AG SW+EV+ ++H F+ GD  HP  ++I++ L E+  ++K  +G+V    + LHD
Sbjct: 700 QITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIK-NVGYVPNTDFVLHD 758

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           +++E KE+ L  HSEKLA+  AL+    N +P   IRVFKNLRVCGDCH  IK +S +  
Sbjct: 759 VEDEQKEQYLFQHSEKLAVAFALISTP-NPKP---IRVFKNLRVCGDCHTAIKYISMVSG 814

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              VVRDA RFH  + G CSC DYW
Sbjct: 815 REIVVRDANRFHHMKDGTCSCNDYW 839



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 216/433 (49%), Gaps = 19/433 (4%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           VS   V +R  L   +  C++   L  G +LH  +++ G   DL +   L+DMYAKCG +
Sbjct: 254 VSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLV 313

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNA--KACLSLFCQM-GSSSVKPNEFTLSTNI 120
             A  VFD M E NV+SWTAL+ G+++ G    +  + +F  M     V PN FT S  +
Sbjct: 314 QEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVL 373

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L   + G Q+HG  +K G      VGN ++ +Y+K GR+  A + FDV+  K+L+
Sbjct: 374 KACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLV 433

Query: 181 TWNAM----IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +   +    +  + L    D    L R+++  G     FT+ S L     +G++G G QI
Sbjct: 434 SETVVDDTNVKDFNLNSEQD----LDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQI 489

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  ++  GF   +   +  +L+  Y KCG    A +VF+ +E  +VI+W+S+I G+A+  
Sbjct: 490 HAMVVKIGFRTDLS--VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHG 547

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
             ++A+ELF  + E  ++ +     +++   +   L+++  + H  + +   G+   + +
Sbjct: 548 FASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-HFTSMRDNHGIVPRMEH 606

Query: 357 --SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
              +VD+  + GL+ EA E  N MP   + + W   +     H   K  +G     ++ +
Sbjct: 607 YACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTK--LGEHAAKMILE 664

Query: 414 VEPDGVAYLAVLS 426
            EP   A   +LS
Sbjct: 665 REPHDPATYILLS 677



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 194/382 (50%), Gaps = 13/382 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LER 76
           L+ C +      G  LH  L       D +L N LI +Y+K  +   A ++F  M   +R
Sbjct: 59  LKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKR 118

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +VVS+++++  F  N N    + +F Q+     V PNE+  +  I+A       + G+ +
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178

Query: 136 HGMCMKSG-FEWNPVVGNSIIDMYSK---CGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
            G  +K+G F+ +  VG  +IDM+ K      +  A ++FD M  K+++TW  MI     
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQ 238

Query: 192 AGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            GY+D+ + LF +M    G +PD FT T  +  C  +  +  G ++H ++I SG    + 
Sbjct: 239 YGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL- 297

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN--LAEAMELFRQ- 307
             +  SLVD Y KCG + EAR+VFD + + +V+SW++L+ GY +       EAM +F   
Sbjct: 298 -CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNM 356

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L +  +  + F  S ++   A     + G+Q+H    K+       V N +V +Y K G 
Sbjct: 357 LLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGR 416

Query: 368 IDEATELFNEMPVKNVVTWTVI 389
           ++ A + F+ +  KN+V+ TV+
Sbjct: 417 MESARKCFDVLFEKNLVSETVV 438



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 203/395 (51%), Gaps = 25/395 (6%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGY 189
           G  +H     S    + ++ NS+I +YSK      A  +F  M    + +++++++I+ +
Sbjct: 71  GKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130

Query: 190 VLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
                  K + +F ++  + G  P+E+ FT+ ++AC   G    G  + GF++ +G+ + 
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGY-FD 189

Query: 249 VKTVIAGSLVDFYVKCGC----LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               +   L+D +VK GC    L  AR+VFD + +K+V++W+ +I   AQ     EA++L
Sbjct: 190 SHVCVGCELIDMFVK-GCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDL 248

Query: 305 FRQLRERSLQV-DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           F ++   S  V D F L+ ++ V A+   +  GK++H++  +    LD  V  S+VDMY 
Sbjct: 249 FLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYA 308

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGY--GKHGLAKEAVGLFRKMLLD-DVEPDGVA 420
           KCGL+ EA ++F+ M   NV++WT ++ GY  G  G  +EA+ +F  MLL   V P+   
Sbjct: 309 KCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFT 368

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNL 476
           +  VL AC+     +     F    + + +K  +    C+ + L     ++GR++ A+  
Sbjct: 369 FSGVLKACASLPDFD-----FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKC 423

Query: 477 IESMPVKPSIA---IWQTLLSACRVHGDLELGREV 508
            + +  K  ++   +  T +    ++ + +L REV
Sbjct: 424 FDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREV 458


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/680 (38%), Positives = 388/680 (57%), Gaps = 7/680 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            +A  L  C+    L  G+QLH   +K G S D++L   L+D+Y+KC ++  A   F    
Sbjct: 365  VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE 424

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              N+V W  ++  + Q  N      +F QM    + PN+FT  + ++    L ++  G Q
Sbjct: 425  TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K+GF+ N  V + +IDMY+K G++  A R+   +P   +++W AMIAGYV    
Sbjct: 485  IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
              + L LF +M+  G   D   F S + AC  + ++  G QIH     +GF   +   I 
Sbjct: 545  FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS--IN 602

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +L+  Y +CG + EA   F+ I  K+ ISW+SL+ G AQ     EA+++F ++     +
Sbjct: 603  NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662

Query: 315  VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            V+ F   S +   A  A ++QG+QIH+   K     +  VSNS++ +Y K G I +A   
Sbjct: 663  VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWRE 722

Query: 375  FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
            FN+M  +NV++W  +ITGY +HG   EA+ LF +M +  + P+ V ++ VLSACSH GLV
Sbjct: 723  FNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782

Query: 435  EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +E  +YF  +     + P+ EHY C+VD LGRAG+LD A   I+ MP+     IW+TLLS
Sbjct: 783  KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842

Query: 495  ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            AC +H ++E+G      LL L+ ++   YV++SNI+A +  W   +  RKL +  G+KK 
Sbjct: 843  ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKE 902

Query: 555  AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
             GRSW+EV   +H FY GD  HPLT +I++ +  + +R   E+G+V      L++ ++  
Sbjct: 903  PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR-TSEIGYVQDSFSLLNESEQGQ 961

Query: 615  KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
            K+    VHSEKLAI   L+  G N  P   IRV KNLRVC DCH +IK +SKI     +V
Sbjct: 962  KDPITHVHSEKLAIAFGLLSLG-NNIP---IRVMKNLRVCNDCHNWIKYVSKISNRSIIV 1017

Query: 675  RDATRFHRFEGGVCSCGDYW 694
            RDA RFH F+GGVCSC D+W
Sbjct: 1018 RDAHRFHHFDGGVCSCKDFW 1037



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 262/503 (52%), Gaps = 14/503 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   ++  +Y  Q+H      GF    ++ N LID+Y+K G +  A  VF+ +  +++V+
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G  QNG  +  + LFC M +S + P  + LS+ + AS  +   E G Q+H + +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF     V N ++ +YS+  ++  A R+F  M ++  +++N++I+G V  G+SD+ L 
Sbjct: 289 KWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALE 348

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF KMQ     PD  T  S L AC S+G++  G Q+H   I +G   S   ++ GSL+D 
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGM--SADIILEGSLLDL 406

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KC  +  A + F   E ++++ W+ +++ Y Q +NL+++ E+FRQ++   +  + F  
Sbjct: 407 YSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +  G+QIH +  K    L+  V + ++DMY K G +  A  +   +P 
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVE 435
            +VV+WT +I GY +H +  EA+ LF +M    ++ D + + + +SAC+       G   
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
            +Q Y +    D  +       + ++    R GR+ EA    E +  K +I+ W +L+S 
Sbjct: 587 HAQSYAAGFGADLSIN------NALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639

Query: 496 CRVHGDLELGREVGEILLRLDGD 518
               G  E   +V   +LR + +
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAE 662



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 258/486 (53%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   +K  L + G QLH  ++K GF  +  + N L+ +Y++  ++  A  +F  M 
Sbjct: 264 LSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ VS+ +L+ G +Q G +   L LF +M    +KP+  T+++ + A   + ++  GMQ
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G   + ++  S++D+YSKC  +  A + F     ++++ WN M+  Y     
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDN 443

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
                 +FR+MQ  G IP++FT+ S L+ C SLG++  G QIH  +I +GF  +V   + 
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV--YVC 501

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y K G L  A R+   + +  V+SW+++I GY Q +  +EA++LF ++  R +Q
Sbjct: 502 SVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQ 561

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D    +S +   A    + QG+QIHA +     G D S++N+++ +Y +CG I EA   
Sbjct: 562 FDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLA 621

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F ++  KN ++W  +++G  + G  +EA+ +F +ML  + E +   Y + +SA +    +
Sbjct: 622 FEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANI 681

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ Q+  S +        R E  + ++    ++G + +A      M  +  I+ W  +++
Sbjct: 682 KQGQQIHSMVLKTGYDSER-EVSNSLISLYAKSGSISDAWREFNDMSERNVIS-WNAMIT 739

Query: 495 ACRVHG 500
               HG
Sbjct: 740 GYSQHG 745



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 237/471 (50%), Gaps = 9/471 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           ++LH  + K GF  + +L + L+D Y + G+ +GA  VFD+   R+V SW  ++  F+  
Sbjct: 78  MRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS-GVLSSVENGMQIHGMCMKSGFEWNPVV 150
            +      LF +M +  + PN +T +  +KA  G   +     Q+H      GF+ +P+V
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLV 197

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N +ID+YSK G I  A ++F+ +  K ++TW AMI+G    G  ++ +LLF  M     
Sbjct: 198 ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEI 257

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P  +  +S L A   +     G Q+H  +I  GF    +T +   LV  Y +   L+ A
Sbjct: 258 FPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGF--HSETYVCNGLVALYSRSRKLISA 315

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F  +  +  +S++SLI G  Q+     A+ELF +++   L+ D   ++S++   A  
Sbjct: 316 ERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASV 375

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             + +G Q+H++A K     D  +  S++D+Y KC  ++ A + F     +N+V W V++
Sbjct: 376 GALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVML 435

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             YG+     ++  +FR+M ++ + P+   Y ++L  C+  G +   ++  + +    + 
Sbjct: 436 VAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVI---KT 492

Query: 451 KPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             ++  Y C  ++D   + G+L  A  ++  +P +  +  W  +++    H
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K + L   M+E G   +   +   L+ C + GS+    ++H  +  SGF    + ++  S
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGF--DGEPLLIDS 98

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y + G    A +VFD    +SV SW+ +I  +  +++  +   LFR++    +  +
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158

Query: 317 GFVLSSMMG--VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEAT 372
           G+  + ++   V  D A     KQ+H  +     G D+S  V+N ++D+Y K G I+ A 
Sbjct: 159 GYTFAGVLKACVGGDIAF-NYVKQVH--SRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           ++FN + +K++VTW  +I+G  ++GL +EA+ LF  M   ++ P      +VLSA +   
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275

Query: 433 LVE--------------ESQEY--------FSR---LCNDKRMKPRIE-----HYSCIVD 462
           L E               S+ Y        +SR   L + +R+   +       Y+ ++ 
Sbjct: 276 LFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLIS 335

Query: 463 SLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREV 508
            L + G  D A  L   M    +KP      +LLSAC   G L  G ++
Sbjct: 336 GLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/664 (38%), Positives = 396/664 (59%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG L+K+G+ +D    N L+DMYAK G++  A +VF+K+ + ++VSW A++ G + 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + + +  L L  QM  S + PN FTLS+ +KA   +   E G Q+H   MK   E +  V
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
              ++DMYSKC  + +A   F+++P K LI WNA+I+GY       + L LF +M + G 
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++ T ++ LK+   L  V    Q+HG  + SGF   +  V   SL+D Y KC  + +A
Sbjct: 457 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV--NSLIDSYGKCSHVEDA 514

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F+      ++S++S+I  YAQ     EA++LF ++++  L+ D FV SS++   A+ 
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 574

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           +  EQGKQ+H +  K    LD    NS+V+MY KCG ID+A   F+E+  + +V+W+ +I
Sbjct: 575 SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 634

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G  +HG  ++A+ LF +ML + V P+ +  ++VL AC+H+GLV E++ YF  +      
Sbjct: 635 GGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 694

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           KP  EHY+C++D LGRAG+++EA  L+  MP + + ++W  LL A R+H D+ELGR   E
Sbjct: 695 KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 754

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           +L  L+ +    +V+++NI+A AG W     +R+L R   +KK  G SW+EV  +++ F 
Sbjct: 755 MLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFL 814

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +H  +++I+  L E+   M ++ G+V  V+  LHD+++  KE  L  HSEKLA+  
Sbjct: 815 VGDRSHYRSQEIYAKLDELSDLM-DKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 873

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+        G  IRV KNLRVC DCH   K + KI+    +VRD  RFH F+ G CSC
Sbjct: 874 GLIA----TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSC 929

Query: 691 GDYW 694
           GDYW
Sbjct: 930 GDYW 933



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 277/520 (53%), Gaps = 27/520 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  G Q+HG +V  GF  D+ + N L+ MYAKC E   +  +FD++ ERNV
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL   ++Q       + LF +M  S +KPNEF+LS+ + A   L     G  IHG 
Sbjct: 224 VSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGY 283

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G++W+P   N+++DMY+K G + +A  +F+ +    +++WNA+IAG VL  + ++ 
Sbjct: 284 LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L  +M+  G  P+ FT +S LKAC  +G    G Q+H  L+       +   ++  LV
Sbjct: 344 LELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDL--FVSVGLV 401

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  L +AR  F+L+ +K +I+W+++I GY+Q     EA+ LF ++ +  +  +  
Sbjct: 402 DMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQT 461

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            LS+++   A   +V   +Q+H  + K     D  V NS++D Y KC  +++A  +F E 
Sbjct: 462 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 521

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            + ++V++T +IT Y ++G  +EA+ LF +M   +++PD     ++L+AC++    E+  
Sbjct: 522 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG- 580

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSL---------GRAGRLDEAKNLIESMPVKPSIAIW 489
                    K++   I  Y  ++D            + G +D+A      +  +  I  W
Sbjct: 581 ---------KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSW 630

Query: 490 QTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMS 527
             ++     HG    GR+  ++  ++  +G +P +  ++S
Sbjct: 631 SAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVS 667



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 275/504 (54%), Gaps = 15/504 (2%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           +CC+   L   G+Q+H  + K G S D  + N LI++Y+KC     A  + D+  E ++V
Sbjct: 65  QCCTTKSLRP-GLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLV 123

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           SW+AL+ G+ QNG     L  F +M    VK NEFT S+ +KA  ++  +  G Q+HG+ 
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV 183

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           + SGFE +  V N+++ MY+KC    ++ R+FD +P +++++WNA+ + YV   +  + +
Sbjct: 184 VVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAV 243

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF---PYSVKTVIAGS 256
            LF +M   G  P+EF+ +S + AC  L     G  IHG+LI  G+   P+S     A +
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS-----ANA 298

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y K G L +A  VF+ I+Q  ++SW+++I G    E+  +A+EL  Q++   +  +
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN 358

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F LSS +   A   L E G+Q+H+   K+    D  VS  +VDMY KC L+++A   FN
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFN 418

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +P K+++ W  II+GY ++    EA+ LF +M  + +  +      +L + +   +V  
Sbjct: 419 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 478

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++    L         I   + ++DS G+   +++A+ + E   +   ++ + ++++A 
Sbjct: 479 CRQVHG-LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS-FTSMITAY 536

Query: 497 RVHGD----LELGREVGEILLRLD 516
             +G     L+L  E+ ++ L+ D
Sbjct: 537 AQYGQGEEALKLFLEMQDMELKPD 560



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 234/443 (52%), Gaps = 14/443 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L+ C+   L + G QLH +L+KM    DL ++  L+DMY+KC  +  A   F+ + 
Sbjct: 362 LSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP 421

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+++++W A++ G+ Q       LSLF +M    +  N+ TLST +K++  L  V    Q
Sbjct: 422 EKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQ 481

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG+ +KSGF  +  V NS+ID Y KC  + +A R+F+      L+++ +MI  Y   G 
Sbjct: 482 VHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQ 541

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF +MQ+    PD F  +S L AC +L +   G Q+H  ++  GF   V  + A
Sbjct: 542 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGF---VLDIFA 598

Query: 255 G-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           G SLV+ Y KCG + +A R F  + ++ ++SWS++I G AQ  +  +A++LF Q+ +  +
Sbjct: 599 GNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 658

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
             +   L S++G      LV + K ++  + +   G      +   ++D+  + G I+EA
Sbjct: 659 SPNHITLVSVLGACNHAGLVTEAK-LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEA 717

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKM--LLDDVEPDGVAYLAVLSAC 428
            EL N+MP + N   W  ++     H    + V L R+   +L  +EP+      +L+  
Sbjct: 718 VELVNKMPFEANASVWGALLGAARIH----KDVELGRRAAEMLFILEPEKSGTHVLLANI 773

Query: 429 SHSGLVEESQEYFSRLCNDKRMK 451
             S    E+     RL  D ++K
Sbjct: 774 YASAGKWENVAEVRRLMRDSKVK 796



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 205/407 (50%), Gaps = 7/407 (1%)

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F Q+    A L+L   +   +  P   + S  +       S+  G+QIH    KSG   +
Sbjct: 34  FSQDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P + N +I++YSKC     A ++ D      L++W+A+I+GY   G     L+ F +M  
Sbjct: 91  PSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G   +EFTF+S LKAC  +  +  G Q+HG ++ SGF   V   +A +LV  Y KC   
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV--FVANTLVVMYAKCDEF 208

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           ++++R+FD I +++V+SW++L   Y Q +   EA+ LF ++    ++ + F LSSM+   
Sbjct: 209 LDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC 268

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                  +GK IH Y  K+    D   +N++VDMY K G + +A  +F ++   ++V+W 
Sbjct: 269 TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWN 328

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I G   H   ++A+ L  +M    + P+     + L AC+  GL E  ++  S L   
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK- 387

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             M+  +     +VD   +   L++A+     +P K  IA W  ++S
Sbjct: 388 MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIA-WNAIIS 433


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 386/670 (57%), Gaps = 9/670 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            LD G Q+H  ++K  F+  + ++N L++MY+K G +  A   F    E +++SW  ++  
Sbjct: 910  LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSGF 144
            + QN      +  F  +    +KP++FTL++ ++A       E    G Q+H   +K G 
Sbjct: 970  YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029

Query: 145  EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
              +  V  ++ID+YSK G+++EA  +        L +WNA++ GY+ +  S K L  F  
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089

Query: 205  MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            M E G   DE T  + +KA G L ++  G QI  + I  GF   +   ++  ++D Y+KC
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL--WVSSGVLDMYIKC 1147

Query: 265  GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            G +  A  +F  I +   ++W+++I GY +  +   A+ ++  +R   +Q D +  ++++
Sbjct: 1148 GDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLI 1207

Query: 325  GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
               +    +EQGKQIHA   K+   LD  V  S+VDMY KCG + +A  +F +M V+ VV
Sbjct: 1208 KASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267

Query: 385  TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
             W  ++ G  +HG   EA+ LFR M  + ++PD V ++ VLSACSHSGL  E+ +YF  +
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327

Query: 445  CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                 + P IEHYSC+VD+LGRAGR+ EA+N+I SMP K S ++++ LL ACR  GD E 
Sbjct: 1328 FKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAET 1387

Query: 505  GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
             + V + LL LD  +   YV++SNI+A +  W++    R + + K +KK  G SW++V  
Sbjct: 1388 AKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKN 1447

Query: 565  EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            ++H F   D +HP    I++ + ++ KR++EE  +V    + L D++EE KE +L  HSE
Sbjct: 1448 KVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507

Query: 625  KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
            KLAI   L+    +  P   IRV KNLRVCGDCH  IK +SK+ +   V+RDA RFH F 
Sbjct: 1508 KLAIAFGLI----STPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563

Query: 685  GGVCSCGDYW 694
             G CSCGDYW
Sbjct: 1564 NGTCSCGDYW 1573



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 241/503 (47%), Gaps = 27/503 (5%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLM--------LNNDLIDMYAKCGEMNGACAV- 69
            L+   +N   D  ++   A  + GF  D          +N+D+ +   +  E   A A+ 
Sbjct: 790  LKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK 849

Query: 70   ---FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
               FD+    N+ +W   +  FL  G   A +  F  +  S++  +  TL   + A+   
Sbjct: 850  MFPFDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGA 907

Query: 127  SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
              ++ G QIH + +KS F     V NS+++MYSK G +  A + F   P   LI+WN MI
Sbjct: 908  DDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMI 967

Query: 187  AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLIT 242
            + Y       + +  FR +   G  PD+FT  S L+AC S G  G     G+Q+H + I 
Sbjct: 968  SSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQVHVYAIK 1026

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
             G      + ++ +L+D Y K G + EA  +        + SW++++ GY +     +A+
Sbjct: 1027 CGIIND--SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084

Query: 303  ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            E F  + E  + +D   L++ +        ++QGKQI AYA K+    D  VS+ ++DMY
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMY 1144

Query: 363  LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            +KCG +  A ELF E+   + V WT +I+GY ++G    A+ ++  M +  V+PD   + 
Sbjct: 1145 IKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFA 1204

Query: 423  AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESM 480
             ++ A S    +E+ ++  + +    ++   ++H+  + +VD   + G + +A  +   M
Sbjct: 1205 TLIKASSCLTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261

Query: 481  PVKPSIAIWQTLLSACRVHGDLE 503
             V+  +  W  +L     HG ++
Sbjct: 1262 DVR-KVVFWNAMLLGLAQHGHVD 1283



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 5/288 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            LA +++     + L  G Q+    +K+GF+ DL +++ ++DMY KCG+M  A  +F ++ 
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              + V+WT ++ G+++NG+    LS++  M  S V+P+E+T +T IKAS  L+++E G Q
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ 1221

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K  +  +  VG S++DMY KCG + +A R+F  M  + ++ WNAM+ G    G+
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             D+ L LFR MQ +G  PD+ TF   L AC   G      +    +  +   Y +   I 
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKT---YGITPEIE 1338

Query: 255  --GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
                LVD   + G + EA  V   +  K+  S    +LG  + +  AE
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 208/471 (44%), Gaps = 62/471 (13%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L  G + H  +V  G   D  L N+LI MY+KCG +  A  VFDK  +R++V+W +++  
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 88   FLQNGNAK--------ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
            + Q  ++             L  + G S  +     L      SG +   E    +HG  
Sbjct: 687  YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET---VHGYA 743

Query: 140  MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
            +K GFE +  V  +++++Y K G + +A  +FD MP +  + WN M+  YV   + D+ L
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 200  LLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F      G  PD   F++     G + S V    + H   + +   Y++K        
Sbjct: 804  RFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKA---YAMK-------- 849

Query: 259  DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
                          +F   +  ++ +W+  +  +     +  A++ F+ L   ++  D  
Sbjct: 850  --------------MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 319  VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             L  ++        ++ G+QIHA   K        VSNS+++MY K G++  A + F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 379  PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            P  ++++W  +I+ Y ++ L  EA+  FR +L D ++PD     +VL ACS      +  
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEG 1011

Query: 439  EYFSR------------LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            EYF+             + ND  +       + ++D   + G++DEA+ L+
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVS------TALIDLYSKGGKMDEAEFLL 1056



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 219/514 (42%), Gaps = 55/514 (10%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            +HG  VK+GF  DL ++  L+++Y K G +  A  +FDKM ER+ V W  ++  +++N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                L  F     S   P+   L   I   GV S V N  + H   +K+           
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVI--GGVNSDVSNNRKRHAEQVKA----------- 845

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
                         A +MF      ++  WN  +  ++ AG     +  F+ +       D
Sbjct: 846  ------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 214  EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
              T    L A      +  G QIH  +I S F   V   ++ SL++ Y K G +  A + 
Sbjct: 894  SVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVP--VSNSLMNMYSKAGVVYAAEKT 951

Query: 274  FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD---- 329
            F    +  +ISW+++I  YAQ     EA+  FR L    L+ D F L+S++   +     
Sbjct: 952  FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011

Query: 330  --FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              F L   G Q+H YA K     D+ VS +++D+Y K G +DEA  L +     ++ +W 
Sbjct: 1012 EYFTL---GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWN 1068

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV------EESQEYF 441
             I+ GY K   +++A+  F  M    +  D +     + A   SG +      ++ Q Y 
Sbjct: 1069 AIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA---SGCLINLKQGKQIQAYA 1125

Query: 442  SRL--CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +L   ND  +       S ++D   + G +  A  L   +  +P    W T++S    +
Sbjct: 1126 IKLGFNNDLWVS------SGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIEN 1178

Query: 500  GDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
            GD +    V   L+R+ G  P  Y   + I A +
Sbjct: 1179 GDEDHALSVYH-LMRVSGVQPDEYTFATLIKASS 1211



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 200/474 (42%), Gaps = 59/474 (12%)

Query: 72   KMLER------NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
            KML R      ++ S T+  C FL          LFC+  S S         + ++++  
Sbjct: 576  KMLLRAHLKVPSISSRTSFACPFL----------LFCRFSSLSSS--SSQWFSLLRSAIA 623

Query: 126  LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
            ++ ++ G + H   + SG   +  + N++I MYSKCG +  A ++FD    + L+TWN++
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 186  IAGYVLAGYSD-------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
            +A Y  A ++D       +G  LF  ++E G      T    LK C   G V     +HG
Sbjct: 684  LAAY--AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741

Query: 239  FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + +  GF   +   ++G+LV+ Y K G + +AR +FD + ++  + W+ ++  Y +    
Sbjct: 742  YAVKIGF--ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799

Query: 299  AEAMELFRQLRERSLQVDGFVLSSMM-GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             EA+  F          D   L  ++ GV +D   V   ++ HA   K            
Sbjct: 800  DEALRFFSAFHRSGFXPDFSNLHCVIGGVNSD---VSNNRKRHAEQVKA----------- 845

Query: 358  IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
                         A ++F      N+  W   +T +   G    A+  F+ +L   +  D
Sbjct: 846  ------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 418  GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
             V  + +LSA   +  ++  ++  + L       P +   + +++   +AG +  A+   
Sbjct: 894  SVTLVIILSAAVGADDLDLGEQIHA-LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 478  ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
             + P    I+ W T++S+     +LE+        L  DG  P  + + S + A
Sbjct: 953  INSPELDLIS-WNTMISSY-AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 394/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  +D G Q+H  +V+MG+  D+   N L+DMY K G ++ A  +F+KM + +V
Sbjct: 116 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 175

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL+ G + NG+    + L  QM SS + PN F LS+ +KA     + + G QIHG 
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + +  +G  ++DMY+K   +++A ++FD M  + LI WNA+I+G    G  D+ 
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F  +++ G   +  T  + LK+  SL +     Q+H      GF +    V    L+
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV--NGLI 353

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL +A RVF+      +I+ +S+I   +Q ++   A++LF ++  + L+ D F
Sbjct: 354 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 413

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           VLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+ +
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P + VV+W+ +I G  +HG  K A+ LF +M+ + + P+ +   +VL AC+H+GLV+E++
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF+ +     +    EHYSC++D LGRAG+LD+A  L+ SMP + + ++W  LL A RV
Sbjct: 534 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 593

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D ELG+   E L  L+ +    +V+++N +A +G WNE  ++RKL +   +KK    S
Sbjct: 594 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F  GD +HP+T++I+  L E+   M +  G++  V   LHD+    KE  
Sbjct: 654 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKA-GYIPNVDVDLHDLDRSEKELL 712

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+  AL    L+  PG  IRV KNLR+C DCH   K +S I+    ++RD  
Sbjct: 713 LSHHSERLAVAFAL----LSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDIN 768

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 769 RFHHFRDGTCSCGDYW 784



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 265/514 (51%), Gaps = 14/514 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L+C     L   G Q+H   +  GF  D+ + N L+ MY   G M+ A  VFD+   ERN
Sbjct: 17  LKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERN 73

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSW  LM  +++N      + +F +M  S ++P EF  S  + A     +++ G Q+H 
Sbjct: 74  AVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA 133

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           M ++ G+E +    N+++DMY K GR++ A+ +F+ MP   +++WNA+I+G VL G+  +
Sbjct: 134 MVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHR 193

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + L  +M+  G +P+ F  +S LKAC   G+   G QIHGF+I +         I   L
Sbjct: 194 AIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN--ADSDDYIGVGL 251

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y K   L +A +VFD +  + +I W++LI G +      EA  +F  LR+  L V+ 
Sbjct: 252 VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 311

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L++++   A        +Q+HA A K+    D  V N ++D Y KC  + +A  +F E
Sbjct: 312 TTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 371

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
               +++  T +IT   +    + A+ LF +ML   +EPD     ++L+AC+     E+ 
Sbjct: 372 CSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 431

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           ++  + L   + M       + +V +  + G +++A+    S+P +  ++ W  ++    
Sbjct: 432 KQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLA 489

Query: 498 VHGDLELGREVGEILLRL--DGDNPVNYVMMSNI 529
            HG    G+   E+  R+  +G NP N++ M+++
Sbjct: 490 QHGH---GKRALELFGRMVDEGINP-NHITMTSV 519



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 194/390 (49%), Gaps = 8/390 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  LV     L+  L+ C+     D G Q+HG ++K     D  +   L+DMYAK   ++
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFD M  R+++ W AL+ G    G      S+F  +    +  N  TL+  +K++ 
Sbjct: 263 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L +     Q+H +  K GF ++  V N +ID Y KC  +++A R+F+   +  +I   +
Sbjct: 323 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 382

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI       + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI   
Sbjct: 383 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 442

Query: 245 FPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           F   +    AG +LV  Y KCG + +A   F  + ++ V+SWS++I G AQ  +   A+E
Sbjct: 443 F---MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 499

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDM 361
           LF ++ +  +  +   ++S++       LV++ K+ +  + K   G+D +  +   ++D+
Sbjct: 500 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDL 558

Query: 362 YLKCGLIDEATELFNEMPVK-NVVTWTVII 390
             + G +D+A EL N MP + N   W  ++
Sbjct: 559 LGRAGKLDDAMELVNSMPFQANASVWGALL 588


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/685 (37%), Positives = 389/685 (56%), Gaps = 7/685 (1%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S       +L+ C     +  G  +H  ++K     D+ ++N LI MYA CG+M  A  V
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F  ML ++ VSW  L+ G +QN      ++ F  M  S  KP++ ++   I ASG  +++
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANL 368

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             GM++H   +K G + N  +GNS+IDMY KC  +      F+ MP K LI+W  +IAGY
Sbjct: 369 LAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGY 428

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
                    L L RK+Q      D     S L AC  L S     +IHG+++  G     
Sbjct: 429 AQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL---A 485

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
             +I  ++V+ Y +   +  AR VF+ I  K ++SW+S+I          EA+ELF  L 
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
           E +++ D   L S++   A  + +++GK+IH +  +    L+  ++NS+VDMY +CG ++
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A  +FN +  ++++ WT +I   G HG  K+A+ LF KM  ++V PD + +LA+L ACS
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           HSGLV E +++F  + N+ +++P  EHY+C+VD L R+  L+EA + + +MP++PS  +W
Sbjct: 666 HSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             LL ACR+H + +LG    + LL+L+ +N  NYV++SN  A  G WN+ E +R + +  
Sbjct: 726 CALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            LKK  G SW+EV+ +IH F   D +HP    I+  L +  K +KE+ G+    K   HD
Sbjct: 786 KLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHD 845

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           + EE K + L  HSE+LA+G  L    L    G  +R+ KNLR+C DCH F K  S+I +
Sbjct: 846 VCEEEKTQMLYGHSERLALGYGL----LVTSKGTCLRITKNLRICDDCHAFFKIASEISQ 901

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              VVRDA+RFH FE G+CSCGD+W
Sbjct: 902 RTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 265/492 (53%), Gaps = 12/492 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK--MLERNVVSWTALMCGF 88
           G ++HG  VK G+   + + N LI MYAKCG++ GA  +FD   M + + VSW +++   
Sbjct: 167 GCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAH 226

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           +  G +   LSLF +M    V+ N +T  + ++A    + ++ G  IH + +KS    + 
Sbjct: 227 VGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDV 286

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N++I MY+ CG++ +A R+F  M  K  ++WN +++G V        +  F+ MQ+ 
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G+ PD+ +  + + A G   ++  G ++H + I  G   ++   I  SL+D Y KC C+ 
Sbjct: 347 GQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMH--IGNSLIDMYGKCCCVK 404

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
                F+ + +K +ISW+++I GYAQ E   +A+ L R+++   + VD  ++ S++   +
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464

Query: 329 DFALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                +  K+IH Y  K   GL D  + N+IV++Y +  L+D A  +F  +  K++V+WT
Sbjct: 465 GLKSEKLIKEIHGYVLK--GGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWT 522

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +IT    +GLA EA+ LF  ++  ++EPD +  ++VL A +    +++ +E    L   
Sbjct: 523 SMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK 582

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
                 +   S +VD   R G ++ A+N+   +  +  I +W ++++A  +HG    G++
Sbjct: 583 GFFLEGLIANS-LVDMYARCGTMENARNIFNYVKQRDLI-LWTSMINANGMHG---CGKD 637

Query: 508 VGEILLRLDGDN 519
             ++  ++  +N
Sbjct: 638 AIDLFSKMTDEN 649



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 256/501 (51%), Gaps = 19/501 (3%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVF 70
           +Q  + +L  C+ +  L  G QLH   +K     D + L+   + MY KCG    A  VF
Sbjct: 46  QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           DKM ER + +W A++   +  G     + L+ +M    V  + FT    +KA G      
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERR 165

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAG 188
            G +IHG+ +K G+     V N++I MY+KCG +  A  +FD  +M     ++WN++I+ 
Sbjct: 166 LGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISA 225

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +V  G S + L LFR+MQE G   + +TF S L+AC     +  G  IH  ++ S   + 
Sbjct: 226 HVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSN--HF 283

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               ++ +L+  Y  CG + +A RVF  +  K  +SW++L+ G  Q +  ++A+  F+ +
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCG 366
           ++   + D   + +M+      A +  G ++HAYA K   G+D++  + NS++DMY KC 
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIK--HGIDSNMHIGNSLIDMYGKCC 401

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +      F  MP K++++WT II GY ++    +A+ L RK+ L+ ++ D +   ++L 
Sbjct: 402 CVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILL 461

Query: 427 ACS---HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           ACS      L++E   Y       K     I   + IV+  G    +D A+++ ES+  K
Sbjct: 462 ACSGLKSEKLIKEIHGYVL-----KGGLADILIQNAIVNVYGELALVDYARHVFESINSK 516

Query: 484 PSIAIWQTLLSACRVHGDLEL 504
             I  W ++++ C VH  L +
Sbjct: 517 -DIVSWTSMITCC-VHNGLAI 535


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/666 (37%), Positives = 402/666 (60%), Gaps = 13/666 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q+H  +VK+GF  + ++ N LI M +K G +  A  VFD M  ++ VSW +++ G + 
Sbjct: 222 GMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVI 281

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG        F  M  +  KP   T ++ IK+   L  +     +H   +KSG   N  V
Sbjct: 282 NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNV 341

Query: 151 GNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             +++   +KC  I++A  +F +M   +S+++W AMI+GY+  G +D+ + LF  M+  G
Sbjct: 342 LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+ FT+++ L    ++      ++IH  +I + +  S  + +  +L+D +VK G + +
Sbjct: 402 VKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEKS--SSVGTALLDAFVKIGNISD 455

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV-FA 328
           A +VF+LIE K VI+WS+++ GYAQ     EA ++F QL    ++ + F   S++    A
Sbjct: 456 AVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTA 515

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             A VEQGKQ HAYA K+       VS+S+V +Y K G I+ A E+F     +++V+W  
Sbjct: 516 PTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNS 575

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+GY +HG AK+A+ +F +M   ++E D + ++ V+SAC+H+GLV + Q YF+ + ND 
Sbjct: 576 MISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDH 635

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P +EHYSC++D   RAG L +A ++I  MP  P+  +W+ +L+A RVH ++ELG+  
Sbjct: 636 HINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLA 695

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E ++ L+  +   YV++SNI+A AG+W+E   +RKL   + +KK  G SW+EV  + + 
Sbjct: 696 AEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYS 755

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +HPL++ I+  L E+  R++ ++G+     Y  HDI++E KE  L  HSE+LAI
Sbjct: 756 FLAGDLSHPLSDHIYSKLSELNTRLR-DVGYQPDTNYVFHDIEDEQKETILSHHSERLAI 814

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+   L E P   +++ KNLRVCGDCH FIK +S + K   VVRD+ RFH F+GG+C
Sbjct: 815 AFGLI-ATLPEIP---LQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLC 870

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 871 SCGDYW 876



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 258/498 (51%), Gaps = 18/498 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+ +     G Q+H   VK G    L + N L+DMY K G +     VFD+M +R+V
Sbjct: 109 LSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDV 168

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+  N        LFC M     +P+ +T+ST I A     +V  GMQIH +
Sbjct: 169 VSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHAL 228

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GFE   +V NS+I M SK G + +A  +FD M  K  ++WN+MIAG+V+ G   + 
Sbjct: 229 VVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEA 288

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F  MQ  G  P   TF S +K+C SL  +G    +H   + SG   S    +  +L+
Sbjct: 289 FETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGL--STNQNVLTALM 346

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
               KC  + +A  +F L+   +SV+SW+++I GY Q  +  +A+ LF  +R   ++ + 
Sbjct: 347 VALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNH 406

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F  S+++ V     + E    IHA   K      +SV  +++D ++K G I +A ++F  
Sbjct: 407 FTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-HSGLVEE 436
           +  K+V+ W+ ++ GY + G  +EA  +F ++  + ++P+   + ++++AC+  +  VE+
Sbjct: 463 IETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQ 522

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            +++ +       +K R+ +  C+  SL     + G ++ A  + +    +  ++ W ++
Sbjct: 523 GKQFHAY-----AIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS-WNSM 576

Query: 493 LSACRVHGDLELGREVGE 510
           +S    HG  +   EV E
Sbjct: 577 ISGYAQHGQAKKALEVFE 594



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 180/386 (46%), Gaps = 33/386 (8%)

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A ++FD  P + L   N ++  Y     + + L LF  +   G  PD +T +  L  C  
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA- 113

Query: 227 LGSVGG--GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            GS  G  G Q+H   +  G  + +   +  SLVD Y K G + + RRVFD +  + V+S
Sbjct: 114 -GSFNGTVGEQVHCQCVKCGLVHHLS--VGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVS 170

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+SL+ GY+      +  ELF  ++    + D + +S+++   A+   V  G QIHA   
Sbjct: 171 WNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVV 230

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           K+    +  V NS++ M  K G++ +A  +F+ M  K+ V+W  +I G+  +G   EA  
Sbjct: 231 KLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFE 290

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACS---HSGLVEESQEYFSRLCNDKRMKPRIEH----Y 457
            F  M L   +P    + +V+ +C+     GLV        R+ + K +K  +       
Sbjct: 291 TFNNMQLAGAKPTHATFASVIKSCASLKELGLV--------RVLHCKTLKSGLSTNQNVL 342

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           + ++ +L +   +D+A +L   M    S+  W  ++S    +GD +    +   L+R +G
Sbjct: 343 TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFS-LMRREG 401

Query: 518 DNPVNY-----------VMMSNIHAD 532
             P ++           V +S IHA+
Sbjct: 402 VKPNHFTYSTILTVQHAVFISEIHAE 427



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 10/174 (5%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C +    ++ G Q H   +K+  +  L +++ L+ +YAK G +  A  +F +  ER++VS
Sbjct: 513 CTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS 572

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHG 137
           W +++ G+ Q+G AK  L +F +M   +++ +  T    I A   +G++   +N   I  
Sbjct: 573 WNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNI-- 630

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
             M +    NP + +   +ID+YS+ G + +A  + + MP     T W  ++A 
Sbjct: 631 --MINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAA 682


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 386/670 (57%), Gaps = 9/670 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            LD G Q+H  ++K  F+  + ++N L++MY+K G +  A   F    E +++SW  ++  
Sbjct: 910  LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSGF 144
            + QN      +  F  +    +KP++FTL++ ++A       E    G Q+H   +K G 
Sbjct: 970  YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029

Query: 145  EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
              +  V  ++ID+YSK G+++EA  +        L +WNA++ GY+ +  S K L  F  
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089

Query: 205  MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            M E G   DE T  + +KA G L ++  G QI  + I  GF   +   ++  ++D Y+KC
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL--WVSSGVLDMYIKC 1147

Query: 265  GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            G +  A  +F  I +   ++W+++I GY +  +   A+ ++  +R   +Q D +  ++++
Sbjct: 1148 GDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLI 1207

Query: 325  GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
               +    +EQGKQIHA   K+   LD  V  S+VDMY KCG + +A  +F +M V+ VV
Sbjct: 1208 KASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267

Query: 385  TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
             W  ++ G  +HG   EA+ LFR M  + ++PD V ++ VLSACSHSGL  E+ +YF  +
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327

Query: 445  CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                 + P IEHYSC+VD+LGRAGR+ EA+N+I SMP K S ++++ LL ACR  GD E 
Sbjct: 1328 FKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAET 1387

Query: 505  GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
             + V + LL LD  +   YV++SNI+A +  W++    R + + K +KK  G SW++V  
Sbjct: 1388 AKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKN 1447

Query: 565  EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            ++H F   D +HP    I++ + ++ KR++EE  +V    + L D++EE KE +L  HSE
Sbjct: 1448 KVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507

Query: 625  KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
            KLAI   L+    +  P   IRV KNLRVCGDCH  IK +SK+ +   V+RDA RFH F 
Sbjct: 1508 KLAIAFGLI----STPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFR 1563

Query: 685  GGVCSCGDYW 694
             G CSCGDYW
Sbjct: 1564 NGTCSCGDYW 1573



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 241/503 (47%), Gaps = 27/503 (5%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLM--------LNNDLIDMYAKCGEMNGACAV- 69
            L+   +N   D  ++   A  + GF  D          +N+D+ +   +  E   A A+ 
Sbjct: 790  LKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK 849

Query: 70   ---FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
               FD+    N+ +W   +  FL  G   A +  F  +  S++  +  TL   + A+   
Sbjct: 850  MFPFDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGA 907

Query: 127  SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
              ++ G QIH + +KS F     V NS+++MYSK G +  A + F   P   LI+WN MI
Sbjct: 908  DDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMI 967

Query: 187  AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLIT 242
            + Y       + +  FR +   G  PD+FT  S L+AC S G  G     G+Q+H + I 
Sbjct: 968  SSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQVHVYAIK 1026

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
             G      + ++ +L+D Y K G + EA  +        + SW++++ GY +     +A+
Sbjct: 1027 CGIIND--SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084

Query: 303  ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            E F  + E  + +D   L++ +        ++QGKQI AYA K+    D  VS+ ++DMY
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMY 1144

Query: 363  LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            +KCG +  A ELF E+   + V WT +I+GY ++G    A+ ++  M +  V+PD   + 
Sbjct: 1145 IKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFA 1204

Query: 423  AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESM 480
             ++ A S    +E+ ++  + +    ++   ++H+  + +VD   + G + +A  +   M
Sbjct: 1205 TLIKASSCLTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM 1261

Query: 481  PVKPSIAIWQTLLSACRVHGDLE 503
             V+  +  W  +L     HG ++
Sbjct: 1262 DVR-KVVFWNAMLLGLAQHGHVD 1283



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 156/288 (54%), Gaps = 5/288 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            LA +++     + L  G Q+    +K+GF+ DL +++ ++DMY KCG+M  A  +F ++ 
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              + V+WT ++ G+++NG+    LS++  M  S V+P+E+T +T IKAS  L+++E G Q
Sbjct: 1162 RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQ 1221

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K  +  +  VG S++DMY KCG + +A R+F  M  + ++ WNAM+ G    G+
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             D+ L LFR MQ +G  PD+ TF   L AC   G      +    +  +   Y +   I 
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKT---YGITPEIE 1338

Query: 255  --GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
                LVD   + G + EA  V   +  K+  S    +LG  + +  AE
Sbjct: 1339 HYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAE 1386



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 208/471 (44%), Gaps = 62/471 (13%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L  G + H  +V  G   D  L N+LI MY+KCG +  A  VFDK  +R++V+W +++  
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 88   FLQNGNAK--------ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
            + Q  ++             L  + G S  +     L      SG +   E    +HG  
Sbjct: 687  YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET---VHGYA 743

Query: 140  MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
            +K GFE +  V  +++++Y K G + +A  +FD MP +  + WN M+  YV   + D+ L
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 200  LLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F      G  PD   F++     G + S V    + H   + +   Y++K        
Sbjct: 804  RFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKA---YAMK-------- 849

Query: 259  DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
                          +F   +  ++ +W+  +  +     +  A++ F+ L   ++  D  
Sbjct: 850  --------------MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 319  VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             L  ++        ++ G+QIHA   K        VSNS+++MY K G++  A + F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 379  PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            P  ++++W  +I+ Y ++ L  EA+  FR +L D ++PD     +VL ACS      +  
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEG 1011

Query: 439  EYFSR------------LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            EYF+             + ND  +       + ++D   + G++DEA+ L+
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVS------TALIDLYSKGGKMDEAEFLL 1056



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 219/514 (42%), Gaps = 55/514 (10%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            +HG  VK+GF  DL ++  L+++Y K G +  A  +FDKM ER+ V W  ++  +++N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                L  F     S   P+   L   I   GV S V N  + H   +K+           
Sbjct: 799  QDEALRFFSAFHRSGFFPDFSNLHCVI--GGVNSDVSNNRKRHAEQVKA----------- 845

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
                         A +MF      ++  WN  +  ++ AG     +  F+ +       D
Sbjct: 846  ------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893

Query: 214  EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
              T    L A      +  G QIH  +I S F   V   ++ SL++ Y K G +  A + 
Sbjct: 894  SVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVP--VSNSLMNMYSKAGVVYAAEKT 951

Query: 274  FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD---- 329
            F    +  +ISW+++I  YAQ     EA+  FR L    L+ D F L+S++   +     
Sbjct: 952  FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011

Query: 330  --FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              F L   G Q+H YA K     D+ VS +++D+Y K G +DEA  L +     ++ +W 
Sbjct: 1012 EYFTL---GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWN 1068

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV------EESQEYF 441
             I+ GY K   +++A+  F  M    +  D +     + A   SG +      ++ Q Y 
Sbjct: 1069 AIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA---SGCLINLKQGKQIQAYA 1125

Query: 442  SRL--CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +L   ND  +       S ++D   + G +  A  L   +  +P    W T++S    +
Sbjct: 1126 IKLGFNNDLWVS------SGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIEN 1178

Query: 500  GDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
            GD +    V   L+R+ G  P  Y   + I A +
Sbjct: 1179 GDEDHALSVYH-LMRVSGVQPDEYTFATLIKASS 1211



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 203/473 (42%), Gaps = 57/473 (12%)

Query: 72   KMLER------NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
            KML R      ++ S T+  C FL          LFC+  S S         + ++++  
Sbjct: 576  KMLLRAHLKVPSISSRTSFACPFL----------LFCRFSSLSSS--SSQWFSLLRSAIA 623

Query: 126  LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
            ++ ++ G + H   + SG   +  + N++I MYSKCG +  A ++FD    + L+TWN++
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 186  IAGYVLAGYSD-------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
            +A Y  A ++D       +G  LF  ++E G      T    LK C   G V     +HG
Sbjct: 684  LAAY--AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741

Query: 239  FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + +  GF   +   ++G+LV+ Y K G + +AR +FD + ++  + W+ ++  Y +    
Sbjct: 742  YAVKIGF--ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799

Query: 299  AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
             EA+  F                   G F DF+       +H     V  G+++ VSN+ 
Sbjct: 800  DEALRFFSAFHRS-------------GFFPDFS------NLHC----VIGGVNSDVSNNR 836

Query: 359  VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
                 +      A ++F      N+  W   +T +   G    A+  F+ +L   +  D 
Sbjct: 837  KRHAEQVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894

Query: 419  VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
            V  + +LSA   +  ++  ++  + L       P +   + +++   +AG +  A+    
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHA-LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI 953

Query: 479  SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
            + P    I+ W T++S+     +LE+        L  DG  P  + + S + A
Sbjct: 954  NSPELDLIS-WNTMISSY-AQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 394/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  +D G Q+H  +V+MG+  D+   N L+DMY K G ++ A  +F+KM + +V
Sbjct: 209 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL+ G + NG+    + L  QM SS + PN F LS+ +KA     + + G QIHG 
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 328

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + +  +G  ++DMY+K   +++A ++FD M  + LI WNA+I+G    G  D+ 
Sbjct: 329 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 388

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F  +++ G   +  T  + LK+  SL +     Q+H      GF +    V    L+
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV--NGLI 446

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL +A RVF+      +I+ +S+I   +Q ++   A++LF ++  + L+ D F
Sbjct: 447 DSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           VLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+ +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P + VV+W+ +I G  +HG  K A+ LF +M+ + + P+ +   +VL AC+H+GLV+E++
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF+ +     +    EHYSC++D LGRAG+LD+A  L+ SMP + + ++W  LL A RV
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 686

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D ELG+   E L  L+ +    +V+++N +A +G WNE  ++RKL +   +KK    S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F  GD +HP+T++I+  L E+   M +  G++  V   LHD+    KE  
Sbjct: 747 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKA-GYIPNVDVDLHDLDRSEKELL 805

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+  AL    L+  PG  IRV KNLR+C DCH   K +S I+    ++RD  
Sbjct: 806 LSHHSERLAVAFAL----LSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDIN 861

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 862 RFHHFRDGTCSCGDYW 877



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 261/502 (51%), Gaps = 11/502 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGFL 89
           G Q+H   +  GF  D+ + N L+ MY   G M+ A  VFD+   ERN VSW  LM  ++
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +N      + +F +M  S ++P EF  S  + A     +++ G Q+H M ++ G+E +  
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             N+++DMY K GR++ A+ +F+ MP   +++WNA+I+G VL G+  + + L  +M+  G
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 298

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +P+ F  +S LKAC   G+   G QIHGF+I +         I   LVD Y K   L +
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN--ADSDDYIGVGLVDMYAKNHFLDD 356

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A +VFD +  + +I W++LI G +      EA  +F  LR+  L V+   L++++   A 
Sbjct: 357 AMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTAS 416

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                  +Q+HA A K+    D  V N ++D Y KC  + +A  +F E    +++  T +
Sbjct: 417 LEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSM 476

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           IT   +    + A+ LF +ML   +EPD     ++L+AC+     E+ ++  + L   + 
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           M       + +V +  + G +++A+    S+P +  ++ W  ++     HG    G+   
Sbjct: 537 MSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGH---GKRAL 591

Query: 510 EILLRL--DGDNPVNYVMMSNI 529
           E+  R+  +G NP N++ M+++
Sbjct: 592 ELFGRMVDEGINP-NHITMTSV 612



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH  L+K GF   L   N LI  Y+KC     A  VFD++ +   VSW++L+  +  
Sbjct: 23  GAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  ++ +  F  M +  V  NEF L   +K    +   + G Q+H M M +GF  +  V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFV 137

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            N+++ MY   G +++A R+FD   + ++ ++WN +++ YV        + +F +M   G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P EF F+  + AC    ++  G Q+H  ++  G+   V T  A +LVD YVK G +  
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT--ANALVDMYVKMGRVDI 255

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  +F+ +    V+SW++LI G     +   A+EL  Q++   L  + F+LSS++   A 
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAG 315

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               + G+QIH +  K  +  D  +   +VDMY K   +D+A ++F+ M  ++++ W  +
Sbjct: 316 AGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNAL 375

Query: 390 ITGYGKHGLAKEAVGLF 406
           I+G    G   EA  +F
Sbjct: 376 ISGCSHGGRHDEAFSIF 392



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 195/396 (49%), Gaps = 8/396 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  LV     L+  L+ C+     D G Q+HG ++K     D  +   L+DMYAK   ++
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFD M  R+++ W AL+ G    G      S+F  +    +  N  TL+  +K++ 
Sbjct: 356 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L +     Q+H +  K GF ++  V N +ID Y KC  +++A R+F+   +  +I   +
Sbjct: 416 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 475

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI       + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI   
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 245 FPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           F   +    AG +LV  Y KCG + +A   F  + ++ V+SWS++I G AQ  +   A+E
Sbjct: 536 F---MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDM 361
           LF ++ +  +  +   ++S++       LV++ K+ +  + K   G+D +  +   ++D+
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIDRTEEHYSCMIDL 651

Query: 362 YLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
             + G +D+A EL N MP + N   W  ++     H
Sbjct: 652 LGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 4/156 (2%)

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H +A  + SG   S+ N ++  Y KC     A  +F+E+P    V+W+ ++T Y  +GL 
Sbjct: 25  HLHANLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLP 84

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           + A+  F  M  + V  +  A   VL     + L  +       +         +   + 
Sbjct: 85  RSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHA----MAMATGFGSDVFVANA 140

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +V   G  G +D+A+ + +    + +   W  L+SA
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/680 (37%), Positives = 397/680 (58%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L+ C  +     G+++H A++K     D+ + N L+ M+ + G+M+ A  +FD++ 
Sbjct: 115 LVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E++ ++W +++ GF QNG     L  FC +  +++KP+E +L + + ASG L  + NG +
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   MK+  + N  +GN++IDMYSKC  +  A  +FD M  K LI+W  +IA Y     
Sbjct: 235 IHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNC 294

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L L RK+Q  G   D     STL AC  L  +    ++HG+ +  G       ++ 
Sbjct: 295 HTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS---DLMMQ 351

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             ++D Y  CG +  A R+F+ I+ K V+SW+S+I  Y       EA+ +F  ++E S++
Sbjct: 352 NMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L S++   A  + + +GK+IH +  +    L+ S  NS+VDMY  CG ++ A ++
Sbjct: 412 PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKV 471

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F     K++V WT +I  YG HG  K AV LF  M    + PD + +LA+L ACSHSGL+
Sbjct: 472 FICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLI 531

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            E +     +    +++P  EHY+C+VD LGRA  L+EA + ++SM ++P+  +W   L 
Sbjct: 532 NEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLG 591

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR+H + +LG    + LL LD D+P +YV++SN+ A +G W + E +R   +  GLKK 
Sbjct: 592 ACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKN 651

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+EV  ++H F   D +HP + KI+Q L ++ +++++E G+V   K  LH++ +E 
Sbjct: 652 PGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEE 711

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K + L  HSE+LAI   L    ++   G  IR+ KNLRVC DCH F K +SK  +   +V
Sbjct: 712 KVQMLYGHSERLAIAYGL----MSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIV 767

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA+RFH FE GVCSCGD+W
Sbjct: 768 RDASRFHHFEDGVCSCGDFW 787



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/523 (31%), Positives = 283/523 (54%), Gaps = 11/523 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN-VVSWTALMCGFL 89
           G ++HG ++K G+   + + N L+ MYAKC ++ GA  +FD+M ERN VVSW +++  + 
Sbjct: 29  GAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYS 88

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG     L LF +M  + V  N +TL   ++A    S  + GM+IH   +KS    +  
Sbjct: 89  LNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVY 148

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+++ M+ + G+++ AAR+FD +  K  ITWN+MIAG+   G  ++ L  F  +Q+  
Sbjct: 149 VANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN 208

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PDE +  S L A G LG +  G +IH + + +    +++  I  +L+D Y KC C+  
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLR--IGNTLIDMYSKCCCVAY 266

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  VFD +  K +ISW+++I  YAQ     EA++L R+++ + + VD  ++ S +   + 
Sbjct: 267 AGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSG 326

Query: 330 FALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              +   K++H Y  K   GL D  + N I+D+Y  CG I+ AT +F  +  K+VV+WT 
Sbjct: 327 LRCLSHAKEVHGYTLK--RGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTS 384

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+ Y  +GLA EA+G+F  M    VEPD +  +++LSA +    + + +E    +    
Sbjct: 385 MISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKG 444

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            M       + +VD     G L+ A  +      K S+ +W T+++A  +HG  +   E+
Sbjct: 445 FMLEG-STVNSLVDMYACCGSLENAYKVFICTRSK-SLVLWTTMINAYGMHGRGKAAVEL 502

Query: 509 GEIL--LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             I+   +L  D+ + ++ +    + +G  NE +RL +  + K
Sbjct: 503 FSIMEDQKLIPDH-ITFLALLYACSHSGLINEGKRLLETMKCK 544



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 211/395 (53%), Gaps = 7/395 (1%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V  + FT    +KA GV+  +  G +IHG+ +K G++    V NS++ MY+KC  I  A 
Sbjct: 6   VPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR 65

Query: 169 RMFDVMPAKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           ++FD M  ++ +++WN++I+ Y L G   + L LFR+MQ+ G   + +T  + L+AC   
Sbjct: 66  KLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDS 125

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                G +IH  ++ S     V   +A +LV  +V+ G +  A R+FD +++K  I+W+S
Sbjct: 126 SFKKLGMEIHAAILKSNQVLDV--YVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I G+ Q     EA++ F  L++ +L+ D   L S++        +  GK+IHAYA K  
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              +  + N+++DMY KC  +  A  +F++M  K++++WT +I  Y ++    EA+ L R
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           K+    ++ D +   + L ACS    +  ++E        KR    +   + I+D     
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTL--KRGLSDLMMQNMIIDVYADC 361

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           G ++ A  + ES+  K  ++ W +++S C VH  L
Sbjct: 362 GNINYATRMFESIKCKDVVS-WTSMIS-CYVHNGL 394



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +R   +  D F    ++        + +G +IH    K        V+NS+V MY KC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 368 IDEATELFNEMPVKN-VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           I  A +LF+ M  +N VV+W  II+ Y  +G   EA+GLFR+M    V  +    +A L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           AC  S   +   E  + +    ++   +   + +V    R G++  A  + + +  K +I
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLD-VYVANALVAMHVRFGKMSYAARIFDELDEKDNI 179

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRL-DGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             W ++++    +G   L  E  +    L D +   + V + +I A +G      RL  L
Sbjct: 180 T-WNSMIAGFTQNG---LYNEALQFFCGLQDANLKPDEVSLISILAASG------RLGYL 229

Query: 546 ARSKGLKKVAGRSWVEVDKEI 566
              K +   A ++W++ +  I
Sbjct: 230 LNGKEIHAYAMKNWLDSNLRI 250


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/701 (37%), Positives = 400/701 (57%), Gaps = 55/701 (7%)

Query: 42  GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF 101
           GF  ++ + N L+ MY++CG ++ A  VFD+M   +VVSW +++  + + G  K  L +F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216

Query: 102 CQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
            +M +    +P++ TL   +     + +   G Q HG  + S    N  VGN ++DMY+K
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH------------ 208
            G ++EA  +F  MP K +++WNAM+AGY   G  +  + LF +MQE             
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336

Query: 209 -----------------------GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
                                  G  P+E T  S L  C S+G++  G +IH + I   +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--Y 394

Query: 246 PYSVK-------TVIAGSLVDFYVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEE 296
           P  ++        ++   L+D Y KC  +  AR +FD +  +++ V++W+ +I GY+Q  
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHG 454

Query: 297 NLAEAMELFRQLRERSLQV--DGFVLSSMMGVFADFALVEQGKQIHAYAAK-VPSGLDTS 353
           +  +A+EL  ++ E   Q   + F +S  +   A  A +  GKQIHAYA +   + +   
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           VSN ++DMY KCG I +A  +F+ M  KN VTWT ++TGYG HG  +EA+G+F +M    
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIG 574

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
            + DGV  L VL ACSHSG++++  EYF+R+  D  + P  EHY+C+VD LGRAGRL+ A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAA 634

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
             LIE MP++P   +W  LLS CR+HG +ELG    + +  L  +N  +Y ++SN++A+A
Sbjct: 635 LRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANA 694

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G W +  R+R L R KG+KK  G SWVE  K    F+ GD THP  ++I+QVL +  +R+
Sbjct: 695 GRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRI 754

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           K ++G+V    +ALHD+ +E K++ L  HSEK    LAL  G L    G  IR+ KNLRV
Sbjct: 755 K-DIGYVPETGFALHDVDDEEKDDLLFEHSEK----LALAYGILTTPQGAAIRITKNLRV 809

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CGDCH     +S+I+    ++RD++RFH F+ G+CSC  YW
Sbjct: 810 CGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 262/538 (48%), Gaps = 59/538 (10%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN--VVSWTALMCGFLQN 91
           +H  L+  G    L L + LI  Y   G ++ A ++  +    +  V  W +L+  +  N
Sbjct: 47  IHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNN 105

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G A  CLS FC M S S  P+ +T     KA G +SSV  G   H +   +GF  N  VG
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVG 165

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGE 210
           N+++ MYS+CG +++A ++FD MP   +++WN++I  Y   G     L +F KM  E G 
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
            PD+ T  + L  C S+G+   G Q HGF +TS     ++ +  G+ LVD Y K G + E
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEM---IQNMFVGNCLVDMYAKFGMMDE 282

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  VF  +  K V+SW++++ GY+Q     +A+ LF Q++E  +++D    S+ +  +A 
Sbjct: 283 ANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQ 342

Query: 330 FAL-----------------------------------VEQGKQIHAYAAKVP------- 347
             L                                   +  GK+IH YA K P       
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNG 402

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKHGLAKEAVGL 405
            G +  V N ++DMY KC  +D A  +F+ +  K  +VVTWTV+I GY +HG A +A+ L
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462

Query: 406 FRKMLLDDVE--PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             +M  +D +  P+       L AC+    +   ++  +    +++    +   +C++D 
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDM 522

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDG 517
             + G + +A+ + ++M  K  +  W +L++   +HG     L +  E+  I  +LDG
Sbjct: 523 YAKCGDIGDARLVFDNMMEKNEVT-WTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDG 579



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 208/443 (46%), Gaps = 55/443 (12%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F    +   L + L  C+       G Q HG  V      ++ + N L+DMYAK G M+ 
Sbjct: 223 FGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDE 282

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-------------------- 105
           A  VF  M  ++VVSW A++ G+ Q G  +  + LF QM                     
Sbjct: 283 ANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQ 342

Query: 106 ---------------SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM-------KSG 143
                          SS +KPNE TL + +     + ++ +G +IH   +       K+G
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNG 402

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK--SLITWNAMIAGYVLAGYSDKGLLL 201
                +V N +IDMY+KC +++ A  MFD +  K   ++TW  MI GY   G ++K L L
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462

Query: 202 FRKMQEHG--EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
             +M E      P+ FT +  L AC SL ++  G QIH + + +    +V   ++  L+D
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQ-QNAVPLFVSNCLID 521

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG + +AR VFD + +K+ ++W+SL+ GY       EA+ +F ++R    ++DG  
Sbjct: 522 MYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVT 581

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCGLIDEATELF 375
           L  ++   +   +++QG +   Y  ++ +    S        +VD+  + G ++ A  L 
Sbjct: 582 LLVVLYACSHSGMIDQGME---YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638

Query: 376 NEMPVK-NVVTWTVIITGYGKHG 397
            EMP++   V W  +++    HG
Sbjct: 639 EEMPMEPPPVVWVALLSCCRIHG 661



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHG-ALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           +L  C+    L  G Q+H  AL     +  L ++N LIDMYAKCG++  A  VFD M+E+
Sbjct: 483 ALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEK 542

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N V+WT+LM G+  +G  +  L +F +M     K +  TL   + A      ++ GM+  
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 137 GMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAG 193
              MK+ F  +P   +   ++D+  + GR+N A R+ + MP +   + W A+++   + G
Sbjct: 603 NR-MKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHG 661

Query: 194 YSDKGLLLFRKMQEHGEIPD-EFTFTSTLKA 223
             + G    +K+ E     D  +T  S + A
Sbjct: 662 KVELGEYAAKKITELASNNDGSYTLLSNMYA 692


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/666 (37%), Positives = 398/666 (59%), Gaps = 7/666 (1%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           D G ++HG ++KMG   D    N L+DMY+K GE+ GA AVF  +   +VVSW A++ G 
Sbjct: 200 DLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGC 259

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + +      L L  +M  S  +PN FTLS+ +KA   +   E G Q+H   +K     + 
Sbjct: 260 VLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDL 319

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
                ++DMYSKC  +++A R +D MP K +I WNA+I+GY   G     + LF KM   
Sbjct: 320 FAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSE 379

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               ++ T ++ LK+  SL ++    QIH   I SG  YS   VI  SL+D Y KC  + 
Sbjct: 380 DIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGI-YSDFYVI-NSLLDTYGKCNHID 437

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA ++F+    + +++++S+I  Y+Q  +  EA++L+ Q+++  ++ D F+ SS++   A
Sbjct: 438 EASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + +  EQGKQ+H +A K     D   SNS+V+MY KCG I++A   F+E+P + +V+W+ 
Sbjct: 498 NLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSA 557

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I GY +HG  KEA+ LF +ML D V P+ +  ++VL AC+H+GLV E ++YF ++    
Sbjct: 558 MIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF 617

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            +KP  EHY+C++D LGR+G+L+EA  L+ S+P +    +W  LL A R+H ++ELG++ 
Sbjct: 618 GIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKA 677

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            ++L  L+ +    +V+++NI+A AG W    ++RK  +   +KK  G SW+E+  +++ 
Sbjct: 678 AKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYT 737

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +H  +++I+  L ++   + +  G+   V+  +H++ +  KE+ L  HSEKLA+
Sbjct: 738 FIVGDRSHSRSDEIYAKLDQLGDLLSKA-GYSSIVEIDIHNVDKSEKEKLLYHHSEKLAV 796

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+       PG  IRV KNLR+C DCH F K + KI+    +VRD  RFH F+ G C
Sbjct: 797 AFGLIA----TPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSC 852

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 853 SCGDYW 858



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 282/528 (53%), Gaps = 19/528 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L+ G ++HG  V  GF  D  + N L+ MYAKCG ++ +  +F  ++ERNV
Sbjct: 89  LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNV 148

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL   ++Q+      + LF +M  S + PNEF++S  + A   L   + G +IHG+
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGL 208

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G + +    N+++DMYSK G I  A  +F  +    +++WNA+IAG VL   +D  
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L+L  +M+  G  P+ FT +S LKAC ++G    G Q+H  LI       +   +   LV
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG--LV 326

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  + +ARR +D + +K +I+W++LI GY+Q  +  +A+ LF ++    +  +  
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            LS+++   A    ++  KQIH  + K     D  V NS++D Y KC  IDEA+++F E 
Sbjct: 387 TLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEER 446

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +++V +T +IT Y ++G  +EA+ L+ +M   D++PD     ++L+AC++    E+ +
Sbjct: 447 TWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGK 506

Query: 439 EY------FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +       F  +C+       I   + +V+   + G +++A      +P +  I  W  +
Sbjct: 507 QLHVHAIKFGFMCD-------IFASNSLVNMYAKCGSIEDADRAFSEIPNR-GIVSWSAM 558

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA--DAGSWNE 538
           +     HG  +    +   +LR DG  P +  ++S + A   AG  NE
Sbjct: 559 IGGYAQHGHGKEALRLFNQMLR-DGVPPNHITLVSVLCACNHAGLVNE 605



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 272/504 (53%), Gaps = 9/504 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           ++LH  L+K GFS D  L N L+ +Y+KC     A  + D+  E +VVSW++L+ G++QN
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  +  L +F +M    VK NEFT  + +KA  +   +  G ++HGM + +GFE +  V 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++ MY+KCG ++++ R+F  +  +++++WNA+ + YV +    + + LF++M   G +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P+EF+ +  L AC  L     G +IHG ++  G    +    A +LVD Y K G +  A 
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGL--DLDQFSANALVDMYSKAGEIEGAV 238

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VF  I    V+SW+++I G    +    A+ L  +++    + + F LSS +   A   
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             E G+Q+H+   K+ +  D   +  +VDMY KC ++D+A   ++ MP K+++ W  +I+
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY + G   +AV LF KM  +D++ +      VL + +    ++  ++  + +     + 
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHT-ISIKSGIY 417

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
                 + ++D+ G+   +DEA  + E    +  +A + ++++A   +GD   G E  ++
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVA-YTSMITAYSQYGD---GEEALKL 473

Query: 512 LLRL-DGD-NPVNYVMMSNIHADA 533
            L++ D D  P  ++  S ++A A
Sbjct: 474 YLQMQDADIKPDPFICSSLLNACA 497



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 233/443 (52%), Gaps = 14/443 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L+ C+     + G QLH +L+KM    DL     L+DMY+KC  M+ A   +D M 
Sbjct: 287 LSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP 346

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++++++W AL+ G+ Q G+    +SLF +M S  +  N+ TLST +K+   L +++   Q
Sbjct: 347 KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ 406

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +KSG   +  V NS++D Y KC  I+EA+++F+    + L+ + +MI  Y   G 
Sbjct: 407 IHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGD 466

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L L+ +MQ+    PD F  +S L AC +L +   G Q+H   I  GF   +    +
Sbjct: 467 GEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDI--FAS 524

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SLV+ Y KCG + +A R F  I  + ++SWS++I GYAQ  +  EA+ LF Q+    + 
Sbjct: 525 NSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVP 584

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            +   L S++       LV +GKQ +    +V  G+  +  +   ++D+  + G ++EA 
Sbjct: 585 PNHITLVSVLCACNHAGLVNEGKQ-YFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAV 643

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           EL N +P + +   W  ++     H    L ++A     KML  D+EP+      +L+  
Sbjct: 644 ELVNSIPFEADGFVWGALLGAARIHKNIELGQKAA----KMLF-DLEPEKSGTHVLLANI 698

Query: 429 SHSGLVEESQEYFSRLCNDKRMK 451
             S  + E+     +   D ++K
Sbjct: 699 YASAGMWENVAKVRKFMKDSKVK 721


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 263/677 (38%), Positives = 400/677 (59%), Gaps = 10/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C   L L  G ++H  ++KMGF  D+ +   LI +Y++ G +  A  VF  M  R+V
Sbjct: 157 LKAC---LSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDV 213

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW A++ GF QNGN    L +  +M +  VK +  T+S+ +      + V  G+ +H  
Sbjct: 214 GSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLY 273

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E +  V N++I+MYSK GR+ +A R+FD M  + L++WN++IA Y         
Sbjct: 274 VIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F++M   G  PD  T  S     G L     G  +HGF++   +   V  VI  +LV
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRW-LEVDIVIGNALV 392

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDG 317
           + Y K G +  AR VF+ +  + VISW++LI GYAQ    +EA++ +  + E R++  + 
Sbjct: 393 NMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQ 452

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               S++  ++    ++QG +IH    K    LD  V+  ++DMY KCG +++A  LF E
Sbjct: 453 GTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYE 512

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P +  V W  II+  G HG  ++A+ LF+ M  D V+ D + ++++LSACSHSGLV+E+
Sbjct: 513 IPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEA 572

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           Q  F  +  + R+KP ++HY C+VD  GRAG L++A NL+ +MP++   +IW TLL+ACR
Sbjct: 573 QWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACR 632

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG+ ELG    + LL +D +N   YV++SNI+A+ G W    ++R LAR +GL+K  G 
Sbjct: 633 IHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S V V   +  FY G+ +HP   +I++ L  +  +MK  LG+V    + L D++E+ KEE
Sbjct: 693 SSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMK-SLGYVPDYSFVLQDVEEDEKEE 751

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI    V G ++  P   IR+FKNLRVCGDCH   K +SKI +   +VRD+
Sbjct: 752 ILTSHSERLAI----VFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDS 807

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G+CSCGDYW
Sbjct: 808 NRFHHFKDGICSCGDYW 824



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 262/485 (54%), Gaps = 13/485 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            R C+    ++   QLH  L+ +G + D++L   L+ +YA  G+++ +   F  +  +N+
Sbjct: 58  FRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNI 114

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW +++  +++ G  +  +    ++ S S V+P+ +T    +KA     S+ +G ++H 
Sbjct: 115 FSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHC 171

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K GFE +  V  S+I +YS+ G +  A ++F  MP + + +WNAMI+G+   G   +
Sbjct: 172 WVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAE 231

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L +  +M+      D  T +S L  C     V GG  +H ++I  G    V   ++ +L
Sbjct: 232 ALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDV--FVSNAL 289

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y K G L +A+RVFD +E + ++SW+S+I  Y Q ++   A+  F+++    ++ D 
Sbjct: 290 INMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDL 349

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFN 376
             + S+  +F   +    G+ +H +  +     +D  + N++V+MY K G ID A  +F 
Sbjct: 350 LTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFE 409

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGLVE 435
           ++P ++V++W  +ITGY ++GLA EA+  +  M     + P+   ++++L A SH G ++
Sbjct: 410 QLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +  +   RL  +  +   +   +C++D  G+ GRL++A +L   +P + S+  W  ++S+
Sbjct: 470 QGMKIHGRLIKNC-LFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISS 527

Query: 496 CRVHG 500
             +HG
Sbjct: 528 LGIHG 532



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 14/174 (8%)

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           VF     +   KQ+HA    +    D  +   +V +Y   G +  ++  F  +  KN+ +
Sbjct: 57  VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116

Query: 386 WTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           W  +++ Y + G  ++++    ++L L  V PD   +  VL AC      E+   +    
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWV--- 173

Query: 445 CNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
                +K   EH   +  SL     R G ++ A  +   MPV+  +  W  ++S
Sbjct: 174 -----LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMIS 221


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/664 (37%), Positives = 384/664 (57%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+ +HGA +K     D+ + N LI MYAKCG M  A  VF  ML R+ VSW  L+ G +Q
Sbjct: 267 GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQ 326

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  L+ F  M +S+ KP++ ++   I ASG   ++ NG ++H   +++G + N  +
Sbjct: 327 NELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQI 386

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN++IDMY+KC  +      F+ M  K LI+W  +IAGY       + + LFRK+Q  G 
Sbjct: 387 GNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGM 446

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D     S L+AC  L S     +IHG++           ++  ++V+ Y + G    A
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL---ADIMLQNAIVNVYGEVGHRDYA 503

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RR F+ I  K ++SW+S+I          EA+ELF  L++ ++Q D   + S +   A+ 
Sbjct: 504 RRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANL 563

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           + +++GK+IH +  +    L+  +++S+VDMY  CG ++ + ++F+ +  ++++ WT +I
Sbjct: 564 SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMI 623

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
              G HG   EA+ LF+KM  ++V PD + +LA+L ACSHSGL+ E + +F  +    ++
Sbjct: 624 NANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQL 683

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C+VD L R+  L+EA   + SMP+KPS  +W  LL AC +H + ELG    +
Sbjct: 684 EPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAK 743

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            LL+ D  N   Y ++SNI A  G WN+ E +R   +  GLKK  G SW+EVD +IH F 
Sbjct: 744 ELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D +HP T+ I+  L +  K + ++ G++   K+  H++ EE K + L  HSE+LA+G 
Sbjct: 804 ARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGY 863

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L    L    G  IR+ KNLR+C DCH F K  S++ +   VVRDA RFH FE G+CSC
Sbjct: 864 GL----LVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSC 919

Query: 691 GDYW 694
           GD+W
Sbjct: 920 GDFW 923



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 259/493 (52%), Gaps = 10/493 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGF 88
           G ++HG  VK GF   + + N LI MY KCG++ GA  +FD ++  + + VSW +++   
Sbjct: 164 GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           +  G     LSLF +M    V  N +T    ++     S V+ GM IHG  +KS    + 
Sbjct: 224 VTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADV 283

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N++I MY+KCGR+ +A R+F  M  +  ++WN +++G V        L  FR MQ  
Sbjct: 284 YVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNS 343

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            + PD+ +  + + A G  G++  G ++H + I +G   +++  I  +L+D Y KC C+ 
Sbjct: 344 AQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQ--IGNTLIDMYAKCCCVK 401

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
                F+ + +K +ISW+++I GYAQ E   EA+ LFR+++ + + VD  ++ S++   +
Sbjct: 402 HMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                   ++IH Y  K     D  + N+IV++Y + G  D A   F  +  K++V+WT 
Sbjct: 462 GLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTS 520

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +IT    +GL  EA+ LF  +   +++PD +A ++ LSA ++   +++ +E    L   K
Sbjct: 521 MITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR-K 579

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                    S +VD     G ++ ++ +  S+  +  I +W ++++A  +HG    G E 
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI-LWTSMINANGMHG---CGNEA 635

Query: 509 GEILLRLDGDNPV 521
             +  ++  +N +
Sbjct: 636 IALFKKMTDENVI 648



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 261/516 (50%), Gaps = 26/516 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G QLH  L+K   S    L   L+ MY KCG +  A  VFD+M ER + +W A+M  
Sbjct: 62  LPQGQQLHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGA 119

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F+ +G     + L+ +M    V  +  T  + +KA G L     G +IHG+ +K GF   
Sbjct: 120 FVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEF 179

Query: 148 PVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
             V N++I MY KCG +  A  +FD  +M  +  ++WN++I+ +V  G   + L LFR+M
Sbjct: 180 VFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRM 239

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           QE G   + +TF + L+       V  G  IHG  + S   +     +A +L+  Y KCG
Sbjct: 240 QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSN--HFADVYVANALIAMYAKCG 297

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            + +A RVF  +  +  +SW++L+ G  Q E   +A+  FR ++  + + D   + +++ 
Sbjct: 298 RMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIA 357

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
                  +  GK++HAYA  + +GLD++  + N+++DMY KC  +      F  M  K++
Sbjct: 358 ASGRSGNLLNGKEVHAYA--IRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDL 415

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---HSGLVEESQEY 440
           ++WT II GY ++    EA+ LFRK+ +  ++ D +   +VL ACS       + E   Y
Sbjct: 416 ISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGY 475

Query: 441 -FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            F R   D  ++      + IV+  G  G  D A+   ES+  K  I  W ++++ C VH
Sbjct: 476 VFKRDLADIMLQ------NAIVNVYGEVGHRDYARRAFESIRSK-DIVSWTSMITCC-VH 527

Query: 500 GDLELGREVGEILLRLDGDN--PVNYVMMSNIHADA 533
             L +  E  E+   L   N  P +  ++S + A A
Sbjct: 528 NGLPV--EALELFYSLKQTNIQPDSIAIISALSATA 561



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 10/167 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++HG L++ GF  +  + + L+DMYA CG +  +  +F  + +R+++ WT+++  
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGF 144
              +G     ++LF +M   +V P+  T    + A   SG++   +   +I    MK G+
Sbjct: 626 NGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEI----MKYGY 681

Query: 145 EWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           +  P   +   ++D+ S+   + EA +    MP K S   W A++  
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGA 728


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/668 (38%), Positives = 389/668 (58%), Gaps = 8/668 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L+ G Q+HG +V+ G    + + N LI+MY K G ++ A  VF +M E ++VSW  ++ G
Sbjct: 922  LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEW 146
               +G  +  + +F  +    + P++FT+++ ++A S +        QIH   MK+G   
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 147  NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            +  V  ++ID+YSK G++ EA  +F       L +WNAM+ GY+++G   K L L+  MQ
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101

Query: 207  EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            E GE  ++ T  +  KA G L  +  G QI   ++  GF   +  VI+G L D Y+KCG 
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL-FVISGVL-DMYLKCGE 1159

Query: 267  LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            +  ARR+F+ I     ++W+++I G  +      A+  +  +R   +Q D +  ++++  
Sbjct: 1160 MESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKA 1219

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             +    +EQG+QIHA   K+    D  V  S+VDMY KCG I++A  LF       + +W
Sbjct: 1220 CSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASW 1279

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
              +I G  +HG A+EA+  F +M    V PD V ++ VLSACSHSGLV E+ E F  +  
Sbjct: 1280 NAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1339

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
               ++P IEHYSC+VD+L RAGR+ EA+ +I SMP + S ++++TLL+ACRV  D E G+
Sbjct: 1340 IYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGK 1399

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
             V E LL L+  +   YV++SN++A A  W      R + R   +KK  G SWV++  ++
Sbjct: 1400 RVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKV 1459

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F  GD +H  T+ I+  +  + KR++EE G++    +AL D++EE KE SL  HSEKL
Sbjct: 1460 HLFVAGDRSHEETDVIYNKVEYIMKRIREE-GYLPDTDFALVDVEEEDKECSLYYHSEKL 1518

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            AI   L++      P   +RV KNLRVCGDCH  IK +SK+ +   V+RDA RFH F  G
Sbjct: 1519 AIAYGLMK----TPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSG 1574

Query: 687  VCSCGDYW 694
            VCSCGDYW
Sbjct: 1575 VCSCGDYW 1582



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 222/432 (51%), Gaps = 13/432 (3%)

Query: 77   NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +V++W   +  FLQ G     +  F  M +S V  +  T    +     L+ +E G QIH
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929

Query: 137  GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            G+ ++SG +    VGN +I+MY K G ++ A  +F  M    L++WN MI+G  L+G  +
Sbjct: 930  GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989

Query: 197  KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKTVI 253
              + +F  +   G +PD+FT  S L+AC SLG  GG    TQIH   + +G    + + +
Sbjct: 990  CSVGMFVDLLRGGLLPDQFTVASVLRACSSLG--GGCHLATQIHACAMKAGV--VLDSFV 1045

Query: 254  AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            + +L+D Y K G + EA  +F   +   + SW++++ GY    +  +A+ L+  ++E   
Sbjct: 1046 STTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGE 1105

Query: 314  QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            + +   L++          ++QGKQI A   K    LD  V + ++DMYLKCG ++ A  
Sbjct: 1106 RANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR 1165

Query: 374  LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            +FNE+P  + V WT +I+G  ++G  + A+  +  M L  V+PD   +  ++ ACS    
Sbjct: 1166 IFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTA 1225

Query: 434  VEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
            +E+ ++  +   N  ++    + +  + +VD   + G +++A+ L +       IA W  
Sbjct: 1226 LEQGRQIHA---NTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTS-RIASWNA 1281

Query: 492  LLSACRVHGDLE 503
            ++     HG+ E
Sbjct: 1282 MIVGLAQHGNAE 1293



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 234/516 (45%), Gaps = 46/516 (8%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALM 85
            L  G + H  ++  G   D  L N+LI MY+KCG ++ A  +FD   +  R++V+W A++
Sbjct: 642  LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 86   CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
                    A+    LF  +  S V     TL+   K   + +S      +HG  +K G +
Sbjct: 702  SA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759

Query: 146  WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            W+  V  +++++Y+K GRI EA  +FD M  + ++ WN M+  YV  G   + LLLF + 
Sbjct: 760  WDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819

Query: 206  QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKC 264
               G  PD+ T  +  +   S  +V                + +K + A G+ +  Y   
Sbjct: 820  NRTGLRPDDVTLCTLARVVKSKQNV--------------LEWQLKQLKAYGTKLFMYDD- 864

Query: 265  GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
                         +   VI+W+  +  + Q     EA++ F  +    +  DG     M+
Sbjct: 865  -----------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVML 913

Query: 325  GVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
             V A    +E GKQIH     V SGLD   SV N +++MY+K G +  A  +F +M   +
Sbjct: 914  SVVAGLNCLELGKQIHGIV--VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVD 971

Query: 383  VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            +V+W  +I+G    GL + +VG+F  +L   + PD     +VL ACS  G       + +
Sbjct: 972  LVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG----GGCHLA 1027

Query: 443  RLCNDKRMKPRIEHYS----CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
               +   MK  +   S     ++D   ++G+++EA+ L  +      +A W  ++    V
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQD-GFDLASWNAMMHGYIV 1086

Query: 499  HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             GD      +  IL++  G+   N + ++N    AG
Sbjct: 1087 SGDFPKALRL-YILMQESGER-ANQITLANAAKAAG 1120



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 5/262 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            LA++ +     + L  G Q+   +VK GF+ DL + + ++DMY KCGEM  A  +F+++ 
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              + V+WT ++ G ++NG  +  L  +  M  S V+P+E+T +T +KA  +L+++E G Q
Sbjct: 1172 SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1231

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH   +K    ++P V  S++DMY+KCG I +A  +F       + +WNAMI G    G 
Sbjct: 1232 IHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGN 1291

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            +++ L  F +M+  G  PD  TF   L AC   G V   ++ +    +    Y ++  I 
Sbjct: 1292 AEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLV---SEAYENFYSMQKIYGIEPEIE 1348

Query: 255  --GSLVDFYVKCGCLVEARRVF 274
                LVD   + G + EA +V 
Sbjct: 1349 HYSCLVDALSRAGRIREAEKVI 1370



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 220/503 (43%), Gaps = 31/503 (6%)

Query: 3    RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
            R SF + + R  LA   + C  +        LHG  VK+G  +D+ +   L+++YAK G 
Sbjct: 719  RRSF-VSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGR 777

Query: 63   MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
            +  A  +FD M  R+VV W  +M  ++  G     L LF +   + ++P++ TL T  + 
Sbjct: 778  IREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLAR- 836

Query: 123  SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              V+ S +N ++     +K+        G  +  MY                    +I W
Sbjct: 837  --VVKSKQNVLEWQLKQLKA-------YGTKLF-MYDD------------DDDGSDVIAW 874

Query: 183  NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            N  ++ ++  G + + +  F  M       D  TF   L     L  +  G QIHG ++ 
Sbjct: 875  NKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVR 934

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            SG    V   +   L++ YVK G +  AR VF  + +  ++SW+++I G A       ++
Sbjct: 935  SGLDQVVS--VGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSV 992

Query: 303  ELFRQLRERSLQVDGFVLSSMMGVFADF-ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             +F  L    L  D F ++S++   +          QIHA A K    LD+ VS +++D+
Sbjct: 993  GMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDV 1052

Query: 362  YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            Y K G ++EA  LF      ++ +W  ++ GY   G   +A+ L+  +L+ +        
Sbjct: 1053 YSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY--ILMQESGERANQI 1110

Query: 422  LAVLSACSHSGLVEESQ-EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
                +A +  GLV   Q +    +   +     +   S ++D   + G ++ A+ +   +
Sbjct: 1111 TLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170

Query: 481  PVKPSIAIWQTLLSACRVHGDLE 503
            P  P    W T++S C  +G  E
Sbjct: 1171 P-SPDDVAWTTMISGCVENGQEE 1192


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/688 (37%), Positives = 397/688 (57%), Gaps = 8/688 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++ +   LA  ++  +K   L  G QLH  L+  G++    L N L++MY+KCGE++ A 
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD M +RN+VSWTA++ G  QN      +  FC M      P +F  S+ I+A   L 
Sbjct: 61  KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+E G Q+H + +K G      VG+++ DMYSKCG + +A ++F+ MP K  ++W AMI 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G  ++ LL F+KM +     D+    STL ACG+L +   G  +H  ++  GF  
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDL-IEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +   +  +L D Y K G +  A  VF +  E ++V+S++ LI GY + E + + + +F 
Sbjct: 241 DI--FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 298

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +LR + ++ + F  SS++   A+ A +EQG Q+HA   K+    D  VS+ +VDMY KCG
Sbjct: 299 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG 358

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L++ A + F+E+     + W  +++ +G+HGL K+A+  F +M+   V+P+ + ++++L+
Sbjct: 359 LLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLT 418

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            CSH+GLVEE  +YF  +     + P  EHYSC++D LGRAGRL EAK  I  MP +P+ 
Sbjct: 419 GCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNA 478

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
             W + L ACR+HGD E+G+   E L++L+  N    V++SNI+A+   W +   +R   
Sbjct: 479 FGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRM 538

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           R   +KK+ G SWV+V  + H F   D +H     I++ L  +  ++K   G+V      
Sbjct: 539 RDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAA-GYVPXTDSV 597

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
             D+ +  KE+ L  HSE++A+  AL+   +    GK I V KNLRVC DCH  IK +SK
Sbjct: 598 PLDMDDXMKEKLLHRHSERIAVAFALISMPI----GKPIIVKKNLRVCVDCHSAIKFISK 653

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +     +VRD +RFH F  G CSCGDYW
Sbjct: 654 VTGRKIIVRDNSRFHHFTDGSCSCGDYW 681


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/664 (36%), Positives = 387/664 (58%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+ +HGA++K     D+ + N LI MYAKCG M  A  VF+ ML R+ VSW  L+ G +Q
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N      L+ F  M +S  KP++ ++   I ASG   ++  G ++H   +++G + N  +
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++DMY+KC  +      F+ M  K LI+W  +IAGY    +  + + LFRK+Q  G 
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D     S L+AC  L S     +IHG++           ++  ++V+ Y + G +  A
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL---ADIMLQNAIVNVYGEVGHIDYA 503

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RR F+ I  K ++SW+S+I          EA+ELF  L++ ++Q D   + S +   A+ 
Sbjct: 504 RRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANL 563

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           + +++GK+IH +  +    L+  +++S+VDMY  CG ++ + ++F+ +  ++++ WT +I
Sbjct: 564 SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMI 623

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
              G HG   +A+ LF+KM   +V PD + +LA+L ACSHSGL+ E + +F  +    ++
Sbjct: 624 NANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQL 683

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C+VD L R+  L+EA + + +MP+KPS  IW  LL AC +H + ELG    +
Sbjct: 684 EPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAK 743

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            LL+ D +N   Y ++SNI A  G WN+ E +R   +  GLKK  G SW+EVD +IH F 
Sbjct: 744 ELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D +HP T+ I+  L +  K ++++ G++   K+  H++ EE K + L  HSE+LA+G 
Sbjct: 804 ARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGY 863

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L    L    G  IR+ KNLR+C DCH F K  S++ +   VVRDA RFH FE G+CSC
Sbjct: 864 GL----LVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSC 919

Query: 691 GDYW 694
           GD+W
Sbjct: 920 GDFW 923



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 255/472 (54%), Gaps = 7/472 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGF 88
           G ++HG  VK G+   + + N LI MY KCG++ GA  +FD ++  + + VSW +++   
Sbjct: 164 GAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           +  GN    LSLF +M    V  N +T    ++     S V+ GM IHG  +KS    + 
Sbjct: 224 VAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADV 283

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N++I MY+KCGR+ +A R+F+ M  +  ++WN +++G V        L  FR MQ  
Sbjct: 284 YVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNS 343

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G+ PD+ +  + + A G  G++  G ++H + I +G   +++  I  +LVD Y KC C+ 
Sbjct: 344 GQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQ--IGNTLVDMYAKCCCVK 401

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
                F+ + +K +ISW+++I GYAQ E   EA+ LFR+++ + + VD  ++ S++   +
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                   ++IH Y  K     D  + N+IV++Y + G ID A   F  +  K++V+WT 
Sbjct: 462 GLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTS 520

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +IT    +GL  EA+ LF  +   +++PD +A ++ LSA ++   +++ +E    L   K
Sbjct: 521 MITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR-K 579

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
                    S +VD     G ++ ++ +  S+  +  I +W ++++A  +HG
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI-LWTSMINANGMHG 630



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 164/525 (31%), Positives = 266/525 (50%), Gaps = 26/525 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L  G QLH  L+K   S    L   L+ MY KCG +  A  VFD+M ER +
Sbjct: 53  LDLCVAAKALPQGQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSERTI 110

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW ALM  F+ +G     + L+  M    V  +  T  + +KA G L     G +IHG+
Sbjct: 111 FSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSD 196
            +K G+     V N++I MY KCG +  A  +FD  +M  +  ++WN++I+ +V  G   
Sbjct: 171 AVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCL 230

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LFR+MQE G   + +TF + L+       V  G  IHG ++ S   +     +A +
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSN--HFADVYVANA 288

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG + +A RVF+ +  +  +SW++L+ G  Q E  ++A+  FR ++    + D
Sbjct: 289 LIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPD 348

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATEL 374
              + +++        + +GK++HAYA  + +GLD++  + N++VDMY KC  +      
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKEVHAYA--IRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---HS 431
           F  M  K++++WT II GY ++    EA+ LFRK+ +  ++ D +   +VL ACS     
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466

Query: 432 GLVEESQEY-FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
             + E   Y F R   D  ++      + IV+  G  G +D A+   ES+  K  I  W 
Sbjct: 467 NFIREIHGYVFKRDLADIMLQ------NAIVNVYGEVGHIDYARRAFESIRSK-DIVSWT 519

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDN--PVNYVMMSNIHADA 533
           ++++ C VH  L +  E  E+   L   N  P +  ++S + A A
Sbjct: 520 SMITCC-VHNGLPV--EALELFYSLKQTNIQPDSIAIISALSATA 561



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 10/167 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++HG L++ GF  +  + + L+DMYA CG +  +  +F  + +R+++ WT+++  
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGF 144
              +G     ++LF +M   +V P+  T    + A   SG++   +   +I    MK G+
Sbjct: 626 NGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEI----MKYGY 681

Query: 145 EWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           +  P   +   ++D+ S+   + EA      MP K S   W A++  
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGA 728


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/677 (36%), Positives = 400/677 (59%), Gaps = 11/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    L+D G ++H  + K+GF +D+ +   LI MY++ G +  A ++FD M  R++
Sbjct: 182 LKACQT--LVD-GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDM 238

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW A++ G +QNGNA   L +  +M    +  +  T+++ +     L  +     IH  
Sbjct: 239 GSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY 298

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E+   V N++I+MY+K G + +A ++F  M  + +++WN++IA Y         
Sbjct: 299 VIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTA 358

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F KMQ +G  PD  T  S                +HGF++  G+      VI  +++
Sbjct: 359 RGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA-VVIGNAVM 417

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDG 317
           D Y K G +  A +VF+LI  K V+SW++LI GY Q    +EA+E++R + E R ++++ 
Sbjct: 418 DMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQ 477

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               S++  +A    ++QG +IH +  K    LD  V   ++D+Y KCG + +A  LF +
Sbjct: 478 GTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQ 537

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P ++ V W  II+ +G HG  ++A+ LFR+M  + V+PD V ++++LSACSHSGLV+E 
Sbjct: 538 VPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG 597

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           + +F  L  +  +KP ++HY C+VD LGRAG L+ A + I+ MP+ P  +IW  LL ACR
Sbjct: 598 KWFF-HLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACR 656

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG++ELG+   + L  +D +N   YV++SNI+A+ G W   +++R LAR +GLKK  G 
Sbjct: 657 IHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 716

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +EV++ +  FY G+ +HP  ++I+  L  +  +MK  LG++    + L D++E+ KE 
Sbjct: 717 SSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMK-SLGYIPDYSFVLQDVEEDEKEH 775

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   ++    +  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+
Sbjct: 776 ILTSHSERLAIAFGII----STPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDS 831

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G+CSCGDYW
Sbjct: 832 KRFHHFKNGICSCGDYW 848



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 278/529 (52%), Gaps = 29/529 (5%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K LL     +LH  LV  G      ++  L+++YA  G+++ +   FD++  ++V +W
Sbjct: 86  CTKTLL---AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTW 142

Query: 82  TALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            +++  +++NG+ +  +  F Q+   +  + + +T    +KA   L    +G +IH    
Sbjct: 143 NSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWVF 199

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GF+W+  V  S+I MYS+ G +  A  +FD MP + + +WNAMI+G +  G + + L 
Sbjct: 200 KLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 259

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +  +M+  G   D  T  S L  C  LG +   T IH ++I  G  + +   ++ +L++ 
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL--FVSNALINM 317

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y K G L +A++VF  +  + V+SW+S+I  Y Q ++   A   F +++   L+ D   L
Sbjct: 318 YAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTL 377

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV-SNSIVDMYLKCGLIDEATELFNEMP 379
            S+  + A     +  + +H +  +    ++  V  N+++DMY K G+ID A ++FN +P
Sbjct: 378 VSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIP 437

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           VK+VV+W  +I+GY ++GLA EA+ ++R M    +++ +   ++++L+A +H G +++  
Sbjct: 438 VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGM 497

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
                L     +   +   +C++D  G+ GRL +A  L   +P + S+  W  ++S   +
Sbjct: 498 RIHGHLIK-TNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP-WNAIISCHGI 555

Query: 499 HGD----LELGREVGEILLRLDGDNPVNYVMMSNIHA-------DAGSW 536
           HG     L+L RE+ +     +G  P +   +S + A       D G W
Sbjct: 556 HGHGEKALKLFREMQD-----EGVKPDHVTFISLLSACSHSGLVDEGKW 599



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 223/417 (53%), Gaps = 11/417 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C++   +     +H  ++K G  F+L ++N LI+MYAK G +  A  VF +M 
Sbjct: 276 VASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMF 335

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSW +++  + QN +       F +M  + ++P+  TL +    +      +N   
Sbjct: 336 LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRS 395

Query: 135 IHGMCMKSGFEWNPVV-GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           +HG  M+ G+    VV GN+++DMY+K G I+ A ++F+++P K +++WN +I+GY   G
Sbjct: 396 VHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNG 455

Query: 194 YSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            + + + ++R M+E  EI  ++ T+ S L A   +G++  G +IHG LI +     V   
Sbjct: 456 LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDV--F 513

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +   L+D Y KCG LV+A  +F  + ++S + W+++I  +    +  +A++LFR++++  
Sbjct: 514 VGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEG 573

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
           ++ D     S++   +   LV++GK    +      G+  S+ +   +VD+  + G ++ 
Sbjct: 574 VKPDHVTFISLLSACSHSGLVDEGKWF--FHLMQEYGIKPSLKHYGCMVDLLGRAGFLEM 631

Query: 371 ATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           A +   +MP+  +   W  ++     HG  +  +G F    L +V+ + V Y  +LS
Sbjct: 632 AYDFIKDMPLHPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSENVGYYVLLS 686


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 253/679 (37%), Positives = 401/679 (59%), Gaps = 13/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD--LMLNNDLIDMYAKCG-EMNGACAVFDKMLE 75
           LR CS  L    G+ +   L+K G+ FD  + +   LIDM+ K G ++  A  VFDKM  
Sbjct: 152 LRSCSNPLFFTTGLAIFAFLLKTGY-FDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH 210

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +N+V+WT ++  + Q G     + LFC++  S   P++FTL++ + A   L     G Q+
Sbjct: 211 KNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQL 270

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   ++SG   +  VG +++DMY+K   +  + ++F+ M   ++++W A+I+GYV +   
Sbjct: 271 HSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQE 330

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + + LF  M      P+ FTF+S LKAC SL   G G Q+HG  I  G   S    +  
Sbjct: 331 QEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGL--STINCVGN 388

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           SL++ Y + G +  AR+ F+++ +K++IS+++     A+  +  E+     ++    +  
Sbjct: 389 SLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGA 446

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
             F  + ++   A    + +G+QIHA   K   G +  ++N+++ MY KCG  + A ++F
Sbjct: 447 SPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVF 506

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           N+M  +NV+TWT II+G+ KHG A +A+ LF +ML   V+P+ V Y+AVLSACSH GL++
Sbjct: 507 NDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLID 566

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E+ ++F+ +  +  + PR+EHY+C+VD LGR+G L EA   I SMP      +W+T L +
Sbjct: 567 EAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS 626

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CRVH + +LG    + +L  +  +P  Y+++SN++A  G W++   LRK  + K L K  
Sbjct: 627 CRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKET 686

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EVD ++H F+ GD +HP   KI+  L E+  ++K  LG++    + LHD+++E K
Sbjct: 687 GYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIK-NLGYIPNTDFVLHDVEDEQK 745

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEK+A+  AL+      +P K IRVFKNLRVCGDCH  IK +S +     VVR
Sbjct: 746 EQYLFQHSEKIAVAYALIS---TPKP-KPIRVFKNLRVCGDCHTAIKYISIVTGREIVVR 801

Query: 676 DATRFHRFEGGVCSCGDYW 694
           DA RFH  + G CSC DYW
Sbjct: 802 DANRFHHIKDGKCSCNDYW 820



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 260/544 (47%), Gaps = 38/544 (6%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           ++R+  +  S   + +  L+ C ++  L+ G  LH  L+  G   D +L N LI +Y+KC
Sbjct: 28  ISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKC 87

Query: 61  GEMNGACAVFDKM--LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS---VKPNEFT 115
           G+   A ++F  M   +R++VSW+A++  F  N      L  F  M   S   + PNE+ 
Sbjct: 88  GDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYC 147

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARM-FDV 173
            +  +++         G+ I    +K+G F+ +  VG ++IDM++K G   ++ARM FD 
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           M  K+L+TW  MI  Y   G  D  + LF ++      PD+FT TS L AC  L     G
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLG 267

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            Q+H ++I SG    V   +  +LVD Y K   +  +R++F+ +   +V+SW++LI GY 
Sbjct: 268 KQLHSWVIRSGLASDV--FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYV 325

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           Q     EA++LF  +    +  + F  SS++   A       GKQ+H    K+       
Sbjct: 326 QSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC 385

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V NS+++MY + G ++ A + FN +  KN++++        K   + E+          +
Sbjct: 386 VGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN-------HE 438

Query: 414 VEPDGV-----AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL---- 464
           VE  GV      Y  +LS  +  G + + ++  + +     +K       CI ++L    
Sbjct: 439 VEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALI-----VKSGFGTNLCINNALISMY 493

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDGDNP 520
            + G  + A  +   M  + ++  W +++S    HG     LEL  E+ EI ++    N 
Sbjct: 494 SKCGNKEAALQVFNDMGYR-NVITWTSIISGFAKHGFATKALELFYEMLEIGVK---PNE 549

Query: 521 VNYV 524
           V Y+
Sbjct: 550 VTYI 553



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 16/427 (3%)

Query: 8   LVSE----RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           LVSE    +  L   L  C +      G QLH  +++ G + D+ +   L+DMYAK   +
Sbjct: 240 LVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAV 299

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             +  +F+ ML  NV+SWTAL+ G++Q+   +  + LFC M    V PN FT S+ +KA 
Sbjct: 300 ENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC 359

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             L     G Q+HG  +K G      VGNS+I+MY++ G +  A + F+++  K+LI++N
Sbjct: 360 ASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYN 419

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
                   A  SD+    F    EH  +    FT+   L     +G++  G QIH  ++ 
Sbjct: 420 TAADANAKALDSDES---FNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVK 476

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           SGF       I  +L+  Y KCG    A +VF+ +  ++VI+W+S+I G+A+     +A+
Sbjct: 477 SGF--GTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKAL 534

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           ELF ++ E  ++ +     +++   +   L+++  + H  +      +   + +   +VD
Sbjct: 535 ELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWK-HFNSMHYNHSISPRMEHYACMVD 593

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           +  + GL+ EA E  N MP   + + W   +     H   K      +K+L  + EP   
Sbjct: 594 LLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKIL--EREPHDP 651

Query: 420 AYLAVLS 426
           A   +LS
Sbjct: 652 ATYILLS 658


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/666 (37%), Positives = 402/666 (60%), Gaps = 13/666 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q+H  +VK GF   + + N LI +Y++ G +  A  VFDKM  R+ V+W +++ G+++
Sbjct: 213 GLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG       +F +M  + VKP   T ++ IK+   L  +     +    +KSGF  + +V
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332

Query: 151 GNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             +++   SKC  +++A  +F +M   K++++W AMI+G +  G +D+ + LF +M+  G
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+ FT+++ L     +      +++H  +I + +  S  + +  +L+D YVK G  ++
Sbjct: 393 VKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERS--SSVGTALLDAYVKLGNTID 446

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A +VF++IE K +++WS+++ GYAQ     EA +LF QL +  ++ + F  SS++   A 
Sbjct: 447 AVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACAS 506

Query: 330 -FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             A  EQGKQ HAYA K+       VS+++V MY K G ID A E+F     +++V+W  
Sbjct: 507 PTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNS 566

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+GY +HG AK+A+ +F +M   +++ D V ++ V++AC+H+GLVE+ Q+YF+ + ND 
Sbjct: 567 MISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDH 626

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P ++HYSC++D   RAG L++A  +I  MP  P   +W+TLL A RVH ++ELG   
Sbjct: 627 HINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELA 686

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L+ L  ++   YV++SN++A AG+W E   +RKL   + +KK  G SW+EV  + + 
Sbjct: 687 AEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYS 746

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD THPL+ +I+  L E+  R+K+  G+    K   HDI++E KE  L  HSE+LAI
Sbjct: 747 FLAGDLTHPLSNQIYSKLSELSIRLKDA-GYQPDTKNVFHDIEDEQKETILSHHSERLAI 805

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+       P   I++ KNLRVCGDCH F K +S + +   VVRD+ RFH F+ G+C
Sbjct: 806 AFGLIA----TPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLC 861

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 862 SCGDYW 867



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 262/513 (51%), Gaps = 8/513 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  +   L+     C+ +L    G Q+H   VK G    + +   L+DMY K   +N  
Sbjct: 88  SLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDG 147

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VFD+M ERNVVSWT+L+ G+  NG       LFCQM    V PN +T+ST I A    
Sbjct: 148 RRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNE 207

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             V  G+Q+H M +K GFE    V NS+I +YS+ G + +A  +FD M  +  +TWN+MI
Sbjct: 208 GVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMI 267

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AGYV  G   +   +F KMQ  G  P   TF S +K+C SL  +     +    + SGF 
Sbjct: 268 AGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGF- 326

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ-KSVISWSSLILGYAQEENLAEAMELF 305
            +   ++  +L+    KC  + +A  +F L+E+ K+V+SW+++I G  Q     +A+ LF
Sbjct: 327 -TTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLF 385

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            Q+R   ++ + F  S+++ V     + E    +HA   K      +SV  +++D Y+K 
Sbjct: 386 SQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKL 441

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G   +A ++F  +  K+++ W+ ++ GY + G  +EA  LF +++ + ++P+   + +V+
Sbjct: 442 GNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVI 501

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           +AC+      E  + F       R+   +   S +V    + G +D A  + +    +  
Sbjct: 502 NACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDL 561

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
           ++ W +++S    HG  +   EV + + + + D
Sbjct: 562 VS-WNSMISGYSQHGQAKKALEVFDEMQKRNMD 593



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 243/492 (49%), Gaps = 30/492 (6%)

Query: 66  ACAVFDKMLERNVV--SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST--NIK 121
           A  +FDK+  R         L+  + ++   K  L+LF  +  SS++P+E TLS   NI 
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A  +   +  G Q+H  C+K G   +  VG S++DMY K   +N+  R+FD M  +++++
Sbjct: 104 AGSLDGKL--GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W +++AGY   G       LF +MQ  G +P+ +T ++ + A  + G VG G Q+H  ++
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             GF  ++   +  SL+  Y + G L +AR VFD +E +  ++W+S+I GY +     E 
Sbjct: 222 KHGFEEAIP--VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEV 279

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
            E+F +++   ++      +S++   A    +   K +   A K     D  V  +++  
Sbjct: 280 FEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVA 339

Query: 362 YLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
             KC  +D+A  LF+ M   KNVV+WT +I+G  ++G   +AV LF +M  + V+P+   
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399

Query: 421 YLAVLS-------ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           Y A+L+       +  H+ +++ + E  S +             + ++D+  + G   +A
Sbjct: 400 YSAILTVHYPVFVSEMHAEVIKTNYERSSSVG------------TALLDAYVKLGNTIDA 447

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
             + E +  K  +A W  +L+     G+ E   ++   L++ +G  P  +   S I+A A
Sbjct: 448 VKVFEIIEAKDLMA-WSAMLAGYAQTGETEEAAKLFHQLIK-EGIKPNEFTFSSVINACA 505

Query: 534 GSWNECERLRKL 545
                 E+ ++ 
Sbjct: 506 SPTAAAEQGKQF 517



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 144/300 (48%), Gaps = 18/300 (6%)

Query: 270 ARRVFDLIEQK--SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           A  +FD I  +  ++   + L+  Y++++   EA+ LF  L   SLQ D   LS +  + 
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A     + G+Q+H    K       SV  S+VDMY+K   +++   +F+EM  +NVV+WT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++ GY  +GL      LF +M  + V P+      V++A  + G+V    +  + +   
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-DLELGR 506
              +  I  ++ ++    R G L +A+++ + M ++  +  W ++++    +G DL    
Sbjct: 224 G-FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVT-WNSMIAGYVRNGQDL---- 277

Query: 507 EVGEIL--LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           EV EI   ++L G  P +    S I +       C  LR+LA  K ++  A +S    D+
Sbjct: 278 EVFEIFNKMQLAGVKPTHMTFASVIKS-------CASLRELALVKLMQCKALKSGFTTDQ 330



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 3/157 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C S     + G Q H   +KM  +  L +++ L+ MYAK G ++ A  VF +  ER++VS
Sbjct: 504 CASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVS 563

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W +++ G+ Q+G AK  L +F +M   ++  +  T    I A      VE G Q +   M
Sbjct: 564 WNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKG-QKYFNSM 622

Query: 141 KSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
            +    NP + +   +ID+YS+ G + +A  + + MP
Sbjct: 623 INDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/680 (37%), Positives = 393/680 (57%), Gaps = 14/680 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS  L ++ GV++H      G   D+ +   L+D YAKCG +  A  +F  M  R+V
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G    G     + L  QM    + PN  T+   +   G   ++ +G  +HG 
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           C++  F+   VVG  ++DMY+KC  +  A ++FDVM  ++ ++W+AMI GYV +    + 
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA 295

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           L LF +M     + P   T  S L+AC  L  +  G ++H ++I  G    +  ++  +L
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI--LLGNTL 353

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG + +A R FD +  K  +S+S+++ G  Q  N A A+ +FR ++   +  D 
Sbjct: 354 LSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD- 412

Query: 318 FVLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
             L++M+GV    +  A ++ G   H Y        DT + N+++DMY KCG I  A E+
Sbjct: 413 --LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN M   ++V+W  +I GYG HGL  EA+GLF  +L   ++PD + ++ +LS+CSHSGLV
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            E + +F  +  D  + PR+EH  C+VD LGRAG +DEA + I +MP +P + IW  LLS
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 590

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR+H ++ELG EV + +  L  ++  N+V++SNI++ AG W++   +R   +  GLKK+
Sbjct: 591 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+E++  +H F GGD +H    +I++ L E+   MK  LG+     +   D++EE 
Sbjct: 651 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK-RLGYQAECSFVFQDVEEEE 709

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           KE+ L  HSEKLAI      G LN + G+ I V KNLRVCGDCH  IK ++ I K    V
Sbjct: 710 KEQILLYHSEKLAIAF----GILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITV 765

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFH F+ G C+CGD+W
Sbjct: 766 RDANRFHHFKNGTCNCGDFW 785



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 252/494 (51%), Gaps = 27/494 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C ++  L    ++H   +K   + D  + + L  +Y  C ++  A  +FD++   +V
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           + W  ++  +  NG     + L+  M    V+PN++T    +KA   L ++E+G++IH  
Sbjct: 75  ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
               G E +  V  +++D Y+KCG + EA R+F  M  + ++ WNAMIAG  L G  D  
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L  +MQE G  P+  T    L   G   ++G G  +HG+ +   F   V  V+   L+
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV--VVGTGLL 252

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDG 317
           D Y KC CL+ AR++FD++  ++ +SWS++I GY   + + EA+ELF Q+  + ++    
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTP 312

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L S++   A    + +G+++H Y  K+   LD  + N+++ MY KCG+ID+A   F+ 
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDX 372

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE- 436
           M  K+ V+++ I++G  ++G A  A+ +FR M L  ++PD    L VL ACSH   ++  
Sbjct: 373 MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432

Query: 437 --SQEYF--------SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
             S  Y         + +CN             ++D   + G++  A+ +   M  +  I
Sbjct: 433 FCSHGYLIVRGFATDTLICN------------ALIDMYSKCGKISFAREVFNRMD-RHDI 479

Query: 487 AIWQTLLSACRVHG 500
             W  ++    +HG
Sbjct: 480 VSWNAMIIGYGIHG 493



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 166/310 (53%), Gaps = 3/310 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR C+K   L  G +LH  ++K+G   D++L N L+ MYAKCG ++ A   FD M 
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++A++ G +QNGNA   LS+F  M  S + P+  T+   + A   L+++++G  
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  GF  + ++ N++IDMYSKCG+I+ A  +F+ M    +++WNAMI GY + G 
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF  +   G  PD+ TF   L +C   G V  G ++    ++  F    +    
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG-RLWFDAMSRDFSIVPRMEHC 553

Query: 255 GSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +VD   + G + EA   + ++  +  V  WS+L+      +N+    E+ ++++    
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 314 QVDG-FVLSS 322
           +  G FVL S
Sbjct: 614 ESTGNFVLLS 623


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/681 (38%), Positives = 395/681 (58%), Gaps = 16/681 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS  L ++ GV++H      G   D+ +   L+D YAKCG +  A  +F  M  R+V
Sbjct: 116 LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G    G     + L  QM    + PN  T+   +   G   ++ +G  +HG 
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGY 235

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           C++  F+   VVG  ++DMY+KC  +  A ++FDVM  ++ ++W+AMI GYV +    + 
Sbjct: 236 CVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 295

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-S 256
           L LF +M     + P   T  S L+AC  L  +  G ++H ++I  G   SV  ++ G +
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLG---SVLDILLGNT 352

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG + +A R FD +  K  +S+S+++ G  Q  N A A+ +FR ++   +  D
Sbjct: 353 LLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412

Query: 317 GFVLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
              L++M+GV    +  A ++ G   H Y        DT + N+++DMY KCG I  A E
Sbjct: 413 ---LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFARE 469

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +FN M   ++V+W  +I GYG HGL  EA+GLF  +L   ++PD + ++ +LS+CSHSGL
Sbjct: 470 VFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGL 529

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V E + +F  +  D  + PR+EH  C+VD LGRAG +DEA + I +MP +P + IW  LL
Sbjct: 530 VMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALL 589

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           SACR+H ++ELG EV + +  L  ++  N+V++SNI++ AG W++   +R   +  GLKK
Sbjct: 590 SACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKK 649

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
           + G SW+E++  +H F GGD +H    +I++ L E+   MK  LG+     +   D++EE
Sbjct: 650 IPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK-RLGYQAECSFVFQDVEEE 708

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KE+ L  HSEKLAI      G LN + G+ I V KNLRVCGDCH  IK ++ I K    
Sbjct: 709 EKEQILLYHSEKLAIAF----GILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREIT 764

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRDA RFH F+ G C+CGD+W
Sbjct: 765 VRDANRFHHFKNGTCNCGDFW 785



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 254/494 (51%), Gaps = 27/494 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C ++  L    ++H   +K   + D  + + L  +Y  C ++  A  +FD++   +V
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           + W  ++  +  NG     + L+  M    V+PN++T    +KA   L ++E+G++IH  
Sbjct: 75  ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
               G E +  V  +++D Y+KCG + EA R+F  M  + ++ WNAMIAG  L G  D  
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L  +MQE G  P+  T    L   G   ++G G  +HG+ +   F   V  V+   L+
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV--VVGTGLL 252

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDG 317
           D Y KC CL+ AR++FD++  ++ +SWS++I GY   + + EA+ELF Q+  + ++    
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTP 312

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L S++   A    + +G+++H Y  K+ S LD  + N+++ MY KCG+ID+A   F+E
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDE 372

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE- 436
           M  K+ V+++ I++G  ++G A  A+ +FR M L  ++PD    L VL ACSH   ++  
Sbjct: 373 MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432

Query: 437 --SQEYF--------SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
             S  Y         + +CN             ++D   + G++  A+ +   M  +  I
Sbjct: 433 FCSHGYLIVRGFATDTLICN------------ALIDMYSKCGKISFAREVFNRMD-RHDI 479

Query: 487 AIWQTLLSACRVHG 500
             W  ++    +HG
Sbjct: 480 VSWNAMIIGYGIHG 493



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 167/310 (53%), Gaps = 3/310 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR C+K   L  G +LH  ++K+G   D++L N L+ MYAKCG ++ A   FD+M 
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++A++ G +QNGNA   LS+F  M  S + P+  T+   + A   L+++++G  
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  GF  + ++ N++IDMYSKCG+I+ A  +F+ M    +++WNAMI GY + G 
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF  +   G  PD+ TF   L +C   G V  G ++    ++  F    +    
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG-RLWFDAMSRDFSIVPRMEHC 553

Query: 255 GSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +VD   + G + EA   + ++  +  V  WS+L+      +N+    E+ ++++    
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGP 613

Query: 314 QVDG-FVLSS 322
           +  G FVL S
Sbjct: 614 ESTGNFVLLS 623


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/677 (37%), Positives = 399/677 (58%), Gaps = 11/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    L+D G ++H    K+GF +++ +   LI MY++ G    A ++FD M  R++
Sbjct: 225 LKACGT--LVD-GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 281

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW A++ G +QNGNA   L +  +M    +K N  T+ + +     L  +   M IH  
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY 341

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E++  V N++I+MY+K G + +A + F  M    +++WN++IA Y         
Sbjct: 342 VIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F KMQ +G  PD  T  S                +HGF++  G+      VI  ++V
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLME-DVVIGNAVV 460

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDG 317
           D Y K G L  A +VF++I  K VISW++LI GYAQ    +EA+E+++ + E + +  + 
Sbjct: 461 DMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQ 520

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               S++  +A    ++QG +IH    K    LD  V+  ++D+Y KCG + +A  LF +
Sbjct: 521 GTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P ++ VTW  II+ +G HG A++ + LF +ML + V+PD V ++++LSACSHSG VEE 
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +  F RL  +  +KP ++HY C+VD LGRAG L+ A + I+ MP++P  +IW  LL ACR
Sbjct: 641 KWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG++ELG+   + L  +D  N   YV++SNI+A+ G W   +++R LAR +GLKK  G 
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +EV++++  FY G+ +HP  ++I++ L  +  +MK  LG++    + L D++E+ KE 
Sbjct: 760 STIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK-SLGYIPDYSFVLQDVEEDEKEH 818

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   ++    +  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+
Sbjct: 819 ILTSHSERLAIAFGII----STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDS 874

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G+CSCGDYW
Sbjct: 875 NRFHHFKDGICSCGDYW 891



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 277/523 (52%), Gaps = 11/523 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  LV  G    + ++  L+++YA  G+++ +   FD++ +++V +W +++  ++ NG+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 94  AKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               +  F Q+   S ++P+ +T    +KA G L    +G +IH    K GF+WN  V  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAA 254

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I MYS+ G    A  +FD MP + + +WNAMI+G +  G + + L +  +M+  G   
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  T  S L  C  LG +     IH ++I  G  + +   ++ +L++ Y K G L +AR+
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL--FVSNALINMYAKFGNLEDARK 372

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F  +    V+SW+S+I  Y Q ++   A   F +++    Q D   L S+  + A    
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 333 VEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  + +H +  +    + D  + N++VDMY K GL+D A ++F  +PVK+V++W  +IT
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492

Query: 392 GYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           GY ++GLA EA+ +++ M    ++ P+   ++++L A +H G +++  +   R+     +
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIK-TNL 551

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV-G 509
              +   +C++D  G+ GRL +A +L   +P + S+  W  ++S   +HG  E   ++ G
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFG 610

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           E+L      + V +V + +  + +G   E +   +L +  G+K
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 653


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/676 (35%), Positives = 399/676 (59%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L++G +LH AL+K G  F++  N  L+ MYA+CG ++ A  VF ++ +++ 
Sbjct: 272 LQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDY 330

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++  ++QN      +  F +M  +   P+   + + + A G L  + NG ++H  
Sbjct: 331 ISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAY 390

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K   + +  + N+++DMY KC  +  +AR+FD M  K  ++W  +IA Y  +    + 
Sbjct: 391 AVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEA 450

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  FR  Q+ G   D     S L+AC  L S+    Q+H + I +G    +  ++   ++
Sbjct: 451 IGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL---LDLILKNRII 507

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y +CG +  A  +F+++++K +++W+S++  +A+   L EA+ LF ++    +Q D  
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L  ++G  A  + + +GK+IH +  +    ++ +V +S+VDMY  CG ++ A ++F+E 
Sbjct: 568 ALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEA 627

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV WT +I   G HG  K+A+ +F++ML   V PD V++LA+L ACSHS LV+E +
Sbjct: 628 KCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGK 687

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            Y   + +  +++P  EHY+C+VD LGR+G+ +EA   I+SMP++P   +W  LL ACR+
Sbjct: 688 FYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRI 747

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H + EL     + LL L+ DNP NYV++SN+ A+ G WN  + +R     +GL+K    S
Sbjct: 748 HKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACS 807

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+E+   +H F   D +H  ++ IH  L E+ ++++ E  +V    + LHD+ EE K + 
Sbjct: 808 WIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDL 867

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LAI   L+    +   G  +R+ KNLRVCGDCHEF K +SK+ +   VVRDA 
Sbjct: 868 LHRHSERLAISFGLI----STASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDAN 923

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F GG CSCGD+W
Sbjct: 924 RFHHFSGGTCSCGDFW 939



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 242/476 (50%), Gaps = 22/476 (4%)

Query: 31  GVQLHGALVKMGFSFDL---MLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           G QLH   V  G   D     L   L+ MY KCG +  A  +FD M  R V SW AL+  
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133

Query: 88  FLQNGNAKACLSLFCQMGSSS----VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
            L +G A   + ++  M +S       P+  TL++ +KA G       G ++HG+ +KSG
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLF 202
            + + +V N+++ MY+KCG ++ A R+F+ M   + + +WN+ I+G V  G   + L LF
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           R+MQ  G   + +T    L+ C  L  +  G ++H  L+  G  ++++     +L+  Y 
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQ---CNALLVMYA 310

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           +CG +  A RVF  I  K  ISW+S++  Y Q    AEA++ F ++ +     D   + S
Sbjct: 311 RCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVS 370

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++        +  G+++HAYA K     D  ++N+++DMY+KC  ++ +  +F+ M +K+
Sbjct: 371 LLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKD 430

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---HSGLVEESQE 439
            V+WT II  Y +     EA+G FR    + ++ D +   ++L ACS      L+++   
Sbjct: 431 HVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHS 490

Query: 440 YFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           Y  R    D  +K R      I+D  G  G +  A N+ E M  K  I  W ++++
Sbjct: 491 YAIRNGLLDLILKNR------IIDIYGECGEVCYALNIFE-MLDKKDIVTWTSMVN 539


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/679 (36%), Positives = 394/679 (58%), Gaps = 12/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+ + + +   Q+   ++K+G+   L++ N L+D Y K   ++ AC +F +M E + 
Sbjct: 156 LSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDS 215

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+ A++ G+ ++G  +  ++LF +M +S +KP EFT +  + A+  L  +  G QIH  
Sbjct: 216 VSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSF 275

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+ F WN  V N+++D YSK   + +A ++FD MP +  +++N +I+GY   G     
Sbjct: 276 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 335

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LFR++Q       +F F + L    +      G QIH   I +     +  ++  SLV
Sbjct: 336 FDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI--LVGNSLV 393

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG   EA  +F  +  +S + W+++I  Y Q+    E ++LF ++R+ S+  D  
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 453

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFN 376
             +S++   A  A +  GKQ+H++  K  SG  ++V   ++++D+Y KCG I +A + F 
Sbjct: 454 TFASLLRASASIASLSLGKQLHSFIIK--SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 511

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EMP +N+V+W  +I+ Y ++G A+  +  F++M+L  ++PD V++L VLSACSHSGLVEE
Sbjct: 512 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 571

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              +F+ +    ++ PR EHY+ +VD L R+GR +EA+ L+  MP+ P   +W ++L+AC
Sbjct: 572 GLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 631

Query: 497 RVHGDLELGREVGEILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           R+H + EL R   + L  ++   +   YV MSNI+A AG W    ++ K  R +G+KK+ 
Sbjct: 632 RIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLP 691

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
             SWVE+  E H F   D  HP  E+I + +  + K M EELG+      ALH+  E+ K
Sbjct: 692 AYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM-EELGYKPDTSCALHNEDEKFK 750

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
            ESL+ HSE+LAI  AL+    +   G  I V KNLR C DCH  IK +SKI+     VR
Sbjct: 751 VESLKYHSERLAIAFALI----STPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVR 806

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+TRFH F  G CSCGD+W
Sbjct: 807 DSTRFHHFRDGFCSCGDFW 825



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 233/453 (51%), Gaps = 4/453 (0%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +I  Y K G +  A  +FD M+ER  V+WT L+ G+ Q    K    LF QM     +
Sbjct: 87  NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P+  T  T +             Q+    +K G++   +VGN+++D Y K  R++ A ++
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  MP    +++NAMI GY   G  +K + LF +MQ  G  P EFTF + L A   L  +
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G QIH F+I + F ++V   ++ +L+DFY K   +++AR++FD + ++  +S++ +I 
Sbjct: 267 VLGQQIHSFVIKTNFVWNV--FVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYA +     A +LFR+L+  +     F  ++M+ + ++    E G+QIHA      +  
Sbjct: 325 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 384

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +  V NS+VDMY KCG  +EA  +F  +  ++ V WT +I+ Y + G  +E + LF KM 
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
              V  D   + ++L A +    +   ++  S +     M   +   S ++D   + G +
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS-NVFSGSALLDVYAKCGSI 503

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +A    + MP + +I  W  ++SA   +G+ E
Sbjct: 504 KDAVQTFQEMPDR-NIVSWNAMISAYAQNGEAE 535



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 3/339 (0%)

Query: 4   VSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           + F+    +Q   A  L   S  L  + G Q+H   +      ++++ N L+DMYAKCG+
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGK 401

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
              A  +F  +  R+ V WTA++  ++Q G  +  L LF +M  +SV  ++ T ++ ++A
Sbjct: 402 FEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRA 461

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S  ++S+  G Q+H   +KSGF  N   G++++D+Y+KCG I +A + F  MP +++++W
Sbjct: 462 SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSW 521

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NAMI+ Y   G ++  L  F++M   G  PD  +F   L AC   G V  G   H   +T
Sbjct: 522 NAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMT 580

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEA 301
             +    +     S+VD   + G   EA ++  ++      I WSS++      +N   A
Sbjct: 581 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELA 640

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
                QL       D     +M  ++A     E   ++H
Sbjct: 641 RRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 679



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 178/362 (49%), Gaps = 4/362 (1%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N V  N +I  Y K G + EA ++FD M  ++ +TW  +I GY       +   LF +MQ
Sbjct: 82  NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PD  TF + L  C         TQ+   +I  G  Y  + ++  +LVD Y K   
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG--YDSRLIVGNTLVDSYCKSNR 199

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A ++F  + +   +S++++I GY+++    +A+ LF +++   L+   F  ++++  
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                 +  G+QIH++  K     +  VSN+++D Y K   + +A +LF+EMP ++ V++
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 319

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
            VII+GY   G  K A  LFR++     +     +  +LS  S++   E  ++  ++   
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 379

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
                  I   + +VD   + G+ +EA+ +  ++  + ++  W  ++SA    G  E G 
Sbjct: 380 -TTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP-WTAMISAYVQKGFYEEGL 437

Query: 507 EV 508
           ++
Sbjct: 438 QL 439



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 33/204 (16%)

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQV 315
           ++K G L +AR++F+ +  K+ +S + +I GY +  NL EA +LF  + ER     ++ +
Sbjct: 62  FLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILI 121

Query: 316 DG-------------FVLSSMMGVFADFALV----------EQGKQIHAYAAKVPS-GLD 351
            G             FV     G   D+             E G QI     ++   G D
Sbjct: 122 GGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYD 181

Query: 352 TS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           +   V N++VD Y K   +D A +LF EMP  + V++  +ITGY K GL ++AV LF +M
Sbjct: 182 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM 241

Query: 410 LLDDVEPDGVAYLAVLSACSHSGL 433
               ++P    + AVL  C++ GL
Sbjct: 242 QNSGLKPTEFTFAAVL--CANIGL 263



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 38/183 (20%)

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV--------------- 383
           I A   K     DTS SN  V  +LK G + +A +LF +MP KN                
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 384 ----------------VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
                           VTWT++I GY +    KEA  LF +M     EPD V ++ +LS 
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 428 CSHSGL---VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           C+   +   + + Q    +L  D R+       + +VDS  ++ RLD A  L + MP   
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVG----NTLVDSYCKSNRLDLACQLFKEMPEID 214

Query: 485 SIA 487
           S++
Sbjct: 215 SVS 217


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/680 (34%), Positives = 401/680 (58%), Gaps = 7/680 (1%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            L+  L+ C+ +  L  G  +H   +++G   D  ++  L+DMY+KCG    A  VF ++ 
Sbjct: 333  LSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE 392

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            + +VVSW+A++    Q G ++    +F +M  S V PN+FTL++ + A+  L  +  G  
Sbjct: 393  DPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGES 452

Query: 135  IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            IH    K GFE++  V N+++ MY K G + +  R+F+    + LI+WNA+++G+     
Sbjct: 453  IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNET 512

Query: 195  SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             D GL +F +M   G  P+ +TF S L++C SL  V  G Q+H  ++ +         + 
Sbjct: 513  CDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL--DGNDFVG 570

Query: 255  GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +LVD Y K   L +A  +F+ + ++ + +W+ ++ GYAQ+    +A++ F Q++   ++
Sbjct: 571  TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 630

Query: 315  VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
             + F L+S +   +  A ++ G+Q+H+ A K     D  V++++VDMY KCG +++A  +
Sbjct: 631  PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 690

Query: 375  FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
            F+ +  ++ V+W  II GY +HG   +A+  F  ML +   PD V ++ VLSACSH GL+
Sbjct: 691  FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750

Query: 435  EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            EE +++F+ L     + P IEHY+C+VD LGRAG+  E ++ IE M +  ++ IW+T+L 
Sbjct: 751  EEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 810

Query: 495  ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            AC++HG++E G      L  L+ +   NY+++SN+ A  G W++   +R L  ++G+KK 
Sbjct: 811  ACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKE 870

Query: 555  AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
             G SWVEV+ ++H F   D +HP   +IH  L ++ +++   +G+     + LH++ +  
Sbjct: 871  PGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLM-SVGYTPNTDHVLHNVSDRE 929

Query: 615  KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
            K+E L  HSE+LA+  AL    L+    K IR+FKNLR+CGDCH+F+K +S+I     VV
Sbjct: 930  KQELLFYHSERLALAFAL----LSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVV 985

Query: 675  RDATRFHRFEGGVCSCGDYW 694
            RD   FH F+ G CSC ++W
Sbjct: 986  RDINCFHHFKNGSCSCQNFW 1005



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 282/537 (52%), Gaps = 12/537 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C+    L+ G  +HG ++K G + D  L N L+++YAKCG  N AC VF ++ ER+V
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTAL+ GF+  G     ++LFC+M    V+ NEFT +T +KA  +   +E G Q+H  
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAE 254

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G   +  VG++++D+Y+KCG +  A R+F  MP ++ ++WNA++ G+   G ++K 
Sbjct: 255 AIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKV 314

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +M        +FT ++ LK C + G++  G  +H   I  G    +   I+  LV
Sbjct: 315 LNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIG--CELDEFISCCLV 372

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG   +A +VF  IE   V+SWS++I    Q+    EA E+F+++R   +  + F
Sbjct: 373 DMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQF 432

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L+S++    D   +  G+ IHA   K     D +V N++V MY+K G + +   +F   
Sbjct: 433 TLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT 492

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +++++W  +++G+  +      + +F +ML +   P+   ++++L +CS    V+  +
Sbjct: 493 TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 552

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  +++  +  +       + +VD   +   L++A+ +   + +K  +  W  +++    
Sbjct: 553 QVHAQIVKNS-LDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQ 610

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
            G  E   +   I ++ +G  P  + + S++         C R+  L   + L  +A
Sbjct: 611 DGQGEKAVKCF-IQMQREGVKPNEFTLASSLSG-------CSRIATLDSGRQLHSMA 659



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 258/485 (53%), Gaps = 4/485 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A +L+ CS  L L++G Q+H   +K+G   DL + + L+D+YAKCGEM  A  VF  M +
Sbjct: 233 ATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK 292

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +N VSW AL+ GF Q G+A+  L+LFC+M  S +  ++FTLST +K      ++  G  +
Sbjct: 293 QNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIV 352

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H + ++ G E +  +   ++DMYSKCG   +A ++F  +    +++W+A+I      G S
Sbjct: 353 HSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQS 412

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            +   +F++M+  G IP++FT  S + A   LG +  G  IH  +   GF Y     +  
Sbjct: 413 REAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYD--NTVCN 470

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y+K G + +  RVF+    + +ISW++L+ G+   E     + +F Q+       
Sbjct: 471 ALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNP 530

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           + +   S++   +  + V+ GKQ+HA   K     +  V  ++VDMY K   +++A  +F
Sbjct: 531 NMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 590

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           N +  +++  WTVI+ GY + G  ++AV  F +M  + V+P+     + LS CS    ++
Sbjct: 591 NRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLD 650

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             ++  S      +        S +VD   + G +++A+ + + +  + +++ W T++  
Sbjct: 651 SGRQLHSMAIKAGQSGDMFV-ASALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICG 708

Query: 496 CRVHG 500
              HG
Sbjct: 709 YSQHG 713


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/678 (38%), Positives = 396/678 (58%), Gaps = 9/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  L+ G Q+HGA+V+ G+  D+   N L+DMY+K G++  A  VF+KM   +V
Sbjct: 212 VNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADV 271

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW A + G + +G+    L L  QM SS + PN FTLS+ +KA     +   G QIHG 
Sbjct: 272 VSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGF 331

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  +++  V   ++DMY+K G +++A ++FD MP + LI WNA+I+G    G   + 
Sbjct: 332 MVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEV 391

Query: 199 LLLFRKMQEHGEIPD--EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           L LF +M++ G   D    T  S LK+  S  ++    Q+H      G   S   VI G 
Sbjct: 392 LSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL-LSDSHVING- 449

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KCG L  A +VF       +IS ++++   +Q ++  +A++LF Q+  + L+ D
Sbjct: 450 LIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            FVLSS++      +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFS 569

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +P + +V+W+ +I G  +HG  K A+ LF +ML + V P+ +   +VLSAC+H+GLV++
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           +++YF  +     +    EHY+C++D LGRAG+L++A  L+ +MP + + A+W  LL A 
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGAS 689

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RVH D ELGR   E L  L+ +    +V+++N +A AG W+E  ++RKL +   +KK   
Sbjct: 690 RVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPA 749

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWVE+  ++H F  GD +HP+T  I+  L E+   M +  G+V  V+  LHD+    KE
Sbjct: 750 MSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKA-GYVPNVEVDLHDVDRSEKE 808

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSE+LA+  AL+    +   G  IRV KNLR+C DCH   K +SKI+    ++RD
Sbjct: 809 LLLSHHSERLAVAFALI----STPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRD 864

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSCGDYW
Sbjct: 865 INRFHHFTNGTCSCGDYW 882



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 269/507 (53%), Gaps = 14/507 (2%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML----ERNVVSWTALM 85
           +G Q+H   V      D+ + N L+ +Y   G ++ A  +FD+ +    ERN VSW  ++
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
             +++N  +   + +F +M  S  +PNEF  S  + A      +E G Q+HG  +++G+E
Sbjct: 178 SAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE 237

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +    N+++DMYSK G I  AA +F+ MPA  +++WNA I+G V  G+  + L L  +M
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM 297

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +  G +P+ FT +S LKAC   G+   G QIHGF++ +   +     +A  LVD Y K G
Sbjct: 298 KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFD--EFVAVGLVDMYAKHG 355

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD--GFVLSSM 323
            L +AR+VFD + ++ +I W++LI G + +    E + LF ++R+  L +D     L+S+
Sbjct: 356 FLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASV 415

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +   A    +   +Q+HA A K+    D+ V N ++D Y KCG +D A ++F E    ++
Sbjct: 416 LKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDI 475

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           ++ T ++T   +    ++A+ LF +ML   +EPD     ++L+AC+     E+ ++  + 
Sbjct: 476 ISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAH 535

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           L   ++    +   + +V +  + G +++A      +P +  I  W  ++     HG   
Sbjct: 536 LIK-RQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPER-GIVSWSAMIGGLAQHGH-- 591

Query: 504 LGREVGEILLR-LDGDNPVNYVMMSNI 529
            G+   ++  R LD     N++ ++++
Sbjct: 592 -GKRALDLFHRMLDEGVAPNHITLTSV 617



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 227/449 (50%), Gaps = 14/449 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH  L+K G       +N L+ +Y++C   + A AVFD++ +   VSW++L+  +  
Sbjct: 23  GAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L  F  M    V  NEF L   +K +     V  G Q+H + + +    +  V
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCA---PDVRFGAQVHALAVATRLVHDVFV 137

Query: 151 GNSIIDMYSKCGRINEAARMFD----VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            N+++ +Y   G ++EA RMFD    V   ++ ++WN MI+ YV    S   + +FR+M 
Sbjct: 138 ANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMV 197

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             GE P+EF F+  + AC     +  G Q+HG ++ +G+   V T  A +LVD Y K G 
Sbjct: 198 WSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT--ANALVDMYSKLGD 255

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  A  VF+ +    V+SW++ I G     +   A+EL  Q++   L  + F LSS++  
Sbjct: 256 IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKA 315

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A       G+QIH +  K  +  D  V+  +VDMY K G +D+A ++F+ MP ++++ W
Sbjct: 316 CAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILW 375

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLD--DVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
             +I+G    G   E + LF +M  +  D++ +     +VL + + S  +  +++  + L
Sbjct: 376 NALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHA-L 434

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
                +       + ++DS  + G+LD A
Sbjct: 435 AEKIGLLSDSHVINGLIDSYWKCGQLDYA 463



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 198/392 (50%), Gaps = 10/392 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  LV     L+  L+ C+     + G Q+HG +VK    FD  +   L+DMYAK G ++
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS--SVKPNEFTLSTNIKA 122
            A  VFD M  R+++ W AL+ G   +G     LSLF +M      +  N  TL++ +K+
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           +    ++ +  Q+H +  K G   +  V N +ID Y KCG+++ A ++F    +  +I+ 
Sbjct: 419 TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISS 478

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
             M+       + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI 
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK 538

Query: 243 SGFPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             F      V AG +LV  Y KCG + +A   F  + ++ ++SWS++I G AQ  +   A
Sbjct: 539 RQF---TSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRA 595

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIV 359
           ++LF ++ +  +  +   L+S++       LV+  K+ +  + K   G+D +  +   ++
Sbjct: 596 LDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKK-YFESMKETFGIDRTEEHYACMI 654

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
           D+  + G +++A EL N MP + N   W  ++
Sbjct: 655 DILGRAGKLEDAMELVNNMPFQANAAVWGALL 686



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 118/230 (51%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M +    L   R  LA  L+  + +  + +  Q+H    K+G   D  + N LID Y KC
Sbjct: 398 MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G+++ A  VF +    +++S T +M    Q  + +  + LF QM    ++P+ F LS+ +
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            A   LS+ E G Q+H   +K  F  +   GN+++  Y+KCG I +A   F  +P + ++
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIV 577

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           +W+AMI G    G+  + L LF +M + G  P+  T TS L AC   G V
Sbjct: 578 SWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLV 627



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 15/166 (9%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G  +H++  K  SGL    SN ++ +Y +C L   A  +F+E+P    V+W+ ++T Y  
Sbjct: 23  GAHLHSHLLK--SGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS---GLVEESQEYFSRLCNDKRMKP 452
           +G+ ++A+  FR M    V  +  A L V+  C+     G    +    +RL +D  +  
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFA-LPVVLKCAPDVRFGAQVHALAVATRLVHDVFVA- 138

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIES---MPVKPSIAIWQTLLSA 495
                + +V   G  G +DEA+ + +    +  + +   W T++SA
Sbjct: 139 -----NALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/688 (36%), Positives = 401/688 (58%), Gaps = 10/688 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L S+       +R C     LD G ++H  ++K+GF  D+ +    I  Y++ G ++ AC
Sbjct: 138 LQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLAC 194

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD M+ R++ +W A++ GF  NG     L +F +M   SV  +  T+S+ +     L 
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            + +G+ IH   +K G E++  V N++I+MY+K G +  A  +F+ M  + +++WN+++A
Sbjct: 255 DIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLA 314

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L ++ KM   G +PD  T  S       LG+      IHGF +T    +
Sbjct: 315 AFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGF-VTRRCWF 373

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  +++D Y K G +  AR+VF+ +  K VISW+SLI GY+Q     EA++++  
Sbjct: 374 LHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSS 433

Query: 308 LRERSLQV-DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +R  S  V +     S++   +    ++QG + H    K     D  VS  +VDMY KCG
Sbjct: 434 MRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCG 493

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            + +A  LF E+P ++ V+W  II+ +G HG   +AV LF++M  + V+PD + ++++LS
Sbjct: 494 KLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLS 553

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACSHSGLV+E Q  F  +     ++P ++HY C+VD  GRAG L++A N +++MPV+P +
Sbjct: 554 ACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDV 613

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
           ++W  LL ACR+H ++EL R V + LL+++ +N   YV++SNI+A  G W   + +R LA
Sbjct: 614 SVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLA 673

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           R +GLKK  G S +EVDK+I  FY G+ THP  E+I+  L  +  +MK  +G+V    + 
Sbjct: 674 RDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMK-SIGYVPDYNFV 732

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           L D++++ KE  L  HSE+LA+   ++    +  P   +++FKNLRVCGDCH   K +SK
Sbjct: 733 LQDVEDDEKENILTSHSERLAMAFGII----STPPKTTLQIFKNLRVCGDCHNATKFISK 788

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           I +   +VRD+ RFH F+ GVCSCGDYW
Sbjct: 789 ITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 253/471 (53%), Gaps = 10/471 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH  LV  G +  + L+  LI+ YA  G++  A   FD++  ++V +W +++  + + G
Sbjct: 61  QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIG 120

Query: 93  NAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           +  A +  F +  S+S ++ + +T    I+A G   ++++G ++H + +K GFE +  + 
Sbjct: 121 HFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFECDVYIA 177

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
            S I  YS+ G ++ A  +FD M  + + TWNAMI+G+ L G   + L +F +M+     
Sbjct: 178 ASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVS 237

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D  T +S L  C  L  +  G  IH + I  G  + +   +  +L++ Y K G L  A 
Sbjct: 238 MDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDL--FVCNALINMYAKFGELRSAE 295

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F+ ++ + ++SW+SL+  + Q +    A+ ++ ++    +  D   L S+  V A+  
Sbjct: 296 TIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELG 355

Query: 332 LVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
                + IH +  +    L D ++ N+I+DMY K G ID A ++F  +PVK+V++W  +I
Sbjct: 356 NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLI 415

Query: 391 TGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           TGY ++GLA EA+ ++  M       P+   ++++L+A S  G +++  +   +L  +  
Sbjct: 416 TGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKN-F 474

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +   I   +C+VD  G+ G+L +A +L   +P + S++ W  ++S   +HG
Sbjct: 475 LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLHG 524



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 188/375 (50%), Gaps = 7/375 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           + V    Q+H + + SG   +  +   +I+ Y+  G I  A   FD +  K + TWN+MI
Sbjct: 54  TKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMI 113

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           + Y   G+    +  F +      +  D +TF   ++ACG+L     G ++H  ++  GF
Sbjct: 114 SAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGF 170

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   IA S + FY + G +  A  +FD +  + + +W+++I G+     +AEA+E+F
Sbjct: 171 ECDV--YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVF 228

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R +S+ +D   +SS++ +      +  G  IH YA K+    D  V N++++MY K 
Sbjct: 229 DEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKF 288

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +  A  +FN+M V+++V+W  ++  + ++     A+G++ KM    V PD +  +++ 
Sbjct: 289 GELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           S  +  G    S+     +         I   + I+D   + G +D A+ + E +PVK  
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDV 408

Query: 486 IAIWQTLLSACRVHG 500
           I+ W +L++    +G
Sbjct: 409 IS-WNSLITGYSQNG 422



 Score = 45.4 bits (106), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 22/185 (11%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           V   KQ+HA    V SG   S+  S  +++ Y   G I  A   F+++  K+V TW  +I
Sbjct: 56  VHLAKQLHALL--VVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMI 113

Query: 391 TGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
           + Y + G    AV  F + L    ++ D   +  V+ AC   G +++ ++    +     
Sbjct: 114 SAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGF 170

Query: 445 -CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            C+       I  YS       R G +  A NL ++M ++  I  W  ++S   ++G + 
Sbjct: 171 ECDVYIAASFIHFYS-------RFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGKVA 222

Query: 504 LGREV 508
              EV
Sbjct: 223 EALEV 227


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/716 (36%), Positives = 393/716 (54%), Gaps = 52/716 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L  G  +HG  +K G   ++ ++N L+++Y  C  +  A AVFD M  RNV
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308

Query: 79  VSWTALM-----CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           ++W +L      CGF Q G     L++F +MG + VKP+   +S+ + A   L  +++G 
Sbjct: 309 ITWNSLASCYVNCGFPQKG-----LNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGK 363

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IHG  +K G   +  V  +++++Y+ C  + EA  +FD+MP ++++TWN++ + YV  G
Sbjct: 364 TIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCG 423

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  KGL +FR+M  +G  PD  T  S L AC  L  +  G  IHGF +  G    V   +
Sbjct: 424 FPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV--FV 481

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSV------------------------------- 282
             +L+  Y KC C+ EA+ VFDLI  + V                               
Sbjct: 482 CNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEV 541

Query: 283 ----ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
               I+WS +I G  +   + EAME+FR+++    + D   + S++   +    +  GK+
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKE 601

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH Y  +     D + +N++VDMY KCG +  +  +F+ MP+K+V +W  +I   G HG 
Sbjct: 602 IHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGN 661

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            KEA+ LF KMLL  V+PD   +  VLSACSHS LVEE  + F+ +  D  ++P  EHY+
Sbjct: 662 GKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYT 721

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
           C+VD   RAG L+EA   I+ MP++P+   W+  L+ CRV+ ++EL +   + L  +D +
Sbjct: 722 CVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPN 781

Query: 519 NPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPL 578
              NYV + NI   A  W+E  ++RKL + +G+ K  G SW  V   +H F  GD ++  
Sbjct: 782 GSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNME 841

Query: 579 TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN 638
           ++KI+  L E+  ++K   G+     Y LHDI +E K ESL  HSEKLA+      G LN
Sbjct: 842 SDKIYNFLDELFAKIKAA-GYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAF----GILN 896

Query: 639 EQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
                 IRVFKNLR+CGDCH  IK +S ++ +  VVRD+ RFH F+ G CSC D+W
Sbjct: 897 LNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/519 (29%), Positives = 264/519 (50%), Gaps = 47/519 (9%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS    L  G ++HG +V+ G   D+ +++  ++ YAKC  +  A  VFD M  R+VV+W
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTW 210

Query: 82  TALM-----CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +L      CGF Q G     L++F +M    VKP+  T+S  + A   L  +++G  IH
Sbjct: 211 NSLSSCYVNCGFPQKG-----LNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIH 265

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G  +K G   N  V N+++++Y  C  + EA  +FD+MP +++ITWN++ + YV  G+  
Sbjct: 266 GFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQ 325

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           KGL +FR+M  +G  PD    +S L AC  L  +  G  IHGF +  G    V   +  +
Sbjct: 326 KGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDV--FVCTA 383

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LV+ Y  C C+ EA+ VFDL+  ++V++W+SL   Y       + + +FR++    ++ D
Sbjct: 384 LVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPD 443

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   +D   ++ GK IH +A +     D  V N+++ +Y KC  + EA  +F+
Sbjct: 444 LVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFD 503

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +P + V +W  I+T Y  +   ++ + +F +M  D+V+ D + +  V+  C  +  +EE
Sbjct: 504 LIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEE 563

Query: 437 SQEYFS------------------RLCNDK---RMKPRIEHY-------------SCIVD 462
           + E F                   R C+     RM   I  Y             + +VD
Sbjct: 564 AMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVD 623

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
              + G L  ++N+ + MP+K  +  W T++ A  +HG+
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN 661



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 223/402 (55%), Gaps = 12/402 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM-----CG 87
           Q H    + G   D+ + N  I  Y KC  + GA  VFD ++ R+VV+W +L      CG
Sbjct: 61  QFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCG 120

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F Q G     L++F +MG + VK N  T+S+ +     L  +++G +IHG  ++ G   +
Sbjct: 121 FPQQG-----LNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED 175

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V ++ ++ Y+KC  + EA  +FD+MP + ++TWN++ + YV  G+  KGL +FR+M  
Sbjct: 176 VFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL 235

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  T +  L AC  L  +  G  IHGF +  G   +V   ++ +LV+ Y  C C+
Sbjct: 236 DGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENV--FVSNALVNLYESCLCV 293

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA+ VFDL+  ++VI+W+SL   Y       + + +FR++    ++ D   +SS++   
Sbjct: 294 REAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPAC 353

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +    ++ GK IH +A K     D  V  ++V++Y  C  + EA  +F+ MP +NVVTW 
Sbjct: 354 SQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWN 413

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            + + Y   G  ++ + +FR+M+L+ V+PD V  L++L ACS
Sbjct: 414 SLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACS 455



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 232/470 (49%), Gaps = 14/470 (2%)

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + +G     + ++    +  +KP++       KA           Q H    + G   + 
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            +GN+ I  Y KC  +  A R+FD + A+ ++TWN++ A YV  G+  +GL +FRKM  +
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               +  T +S L  C  L  +  G +IHGF++  G    V   ++ + V+FY KC C+ 
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDV--FVSSAFVNFYAKCLCVR 193

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA+ VFDL+  + V++W+SL   Y       + + +FR++    ++ D   +S ++   +
Sbjct: 194 EAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           D   ++ GK IH +A K     +  VSN++V++Y  C  + EA  +F+ MP +NV+TW  
Sbjct: 254 DLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNS 313

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           + + Y   G  ++ + +FR+M L+ V+PD +A  ++L ACS    + +S +         
Sbjct: 314 LASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL-KSGKTIHGFAVKH 372

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH-GDLELGRE 507
            M   +   + +V+       + EA+ + + MP + ++  W + LS+C V+ G  + G  
Sbjct: 373 GMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSCYVNCGFPQKGLN 430

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           V   ++ L+G  P    M+S +HA       C  L+ L   K +   A R
Sbjct: 431 VFREMV-LNGVKPDLVTMLSILHA-------CSDLQDLKSGKVIHGFAVR 472



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 211/457 (46%), Gaps = 59/457 (12%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  CS+   L  G  +HG  VK G   D+ +   L+++YA C  +  A  VFD M 
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405

Query: 75  ERNVVSWTALM-----CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
            RNVV+W +L      CGF Q G     L++F +M  + VKP+  T+ + + A   L  +
Sbjct: 406 HRNVVTWNSLSSCYVNCGFPQKG-----LNVFREMVLNGVKPDLVTMLSILHACSDLQDL 460

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           ++G  IHG  ++ G   +  V N+++ +Y+KC  + EA  +FD++P + + +WN ++  Y
Sbjct: 461 KSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAY 520

Query: 190 VLAGYSDKGLLL-----------------------------------FRKMQEHGEIPDE 214
                 +KGL +                                   FRKMQ  G  PDE
Sbjct: 521 FTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDE 580

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  S L+AC     +  G +IH ++      + +      +LVD Y KCG L  +R VF
Sbjct: 581 TTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLAR--TNALVDMYAKCGGLSLSRNVF 638

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D++  K V SW+++I       N  EA+ LF ++    ++ D    + ++   +   LVE
Sbjct: 639 DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVE 698

Query: 335 QGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG 392
           +G QI ++ +       +      +VD+Y + G ++EA      MP++   + W   + G
Sbjct: 699 EGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758

Query: 393 ---YGKHGLAK-EAVGLFRKMLLDDVEPDGVAYLAVL 425
              Y    LAK  A  LF      +++P+G A    L
Sbjct: 759 CRVYKNVELAKISAKKLF------EIDPNGSANYVTL 789


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/695 (36%), Positives = 403/695 (57%), Gaps = 18/695 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDY-GVQLHGALVKMGFS-FDLMLNNDLIDMYAKCGEMNG 65
            +  R     ++R C +++L    G Q+HG  ++ G +   + + N LI+MYAKCG+++ 
Sbjct: 97  FLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDH 156

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF  M++++ VSW +++ G  QN   +  +  +  M  + + P+ F L + + +   
Sbjct: 157 ARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCAS 216

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L  +  G Q HG  +K G + +  V N+++ +Y++  R+ E  ++F  M  +  ++WN +
Sbjct: 217 LGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTV 276

Query: 186 IAGYVLAGYS-DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I     +G S  + + +F +M   G  P+  TF + L    SL +     QIH  ++   
Sbjct: 277 IGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL--- 333

Query: 245 FPYSVK--TVIAGSLVDFYVKCGCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEA 301
             Y+VK    I  +L+  Y K G +     +F  + E++  +SW+S+I GY   E L +A
Sbjct: 334 -KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKA 392

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           M+L   + +R  ++D F  ++++   A  A +E G ++HA A +     D  + +++VDM
Sbjct: 393 MDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDM 452

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ID A+  FN MPV+N+ +W  +I+GY +HG    A+ LF +M L    PD + +
Sbjct: 453 YSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITF 512

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           + VLSACSH GLV+E  EYF  +     + PR+EHYSC+VD LGRAG LD+ +N I  MP
Sbjct: 513 VGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMP 572

Query: 482 VKPSIAIWQTLLSA-CRVHG-DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           +KP+I IW+T+L A CR +G   ELGR   E+L  +D  N VNYV++SN++A  G W + 
Sbjct: 573 IKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDM 632

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            R R+  R   +KK AG SWV +   +H F  GD++HP    I+  L E++K++++  G+
Sbjct: 633 ARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDA-GY 691

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V  +K+AL+D++ E+KEE L  HSEKLA+   L R       G  IR+ KNLRVCGDCH 
Sbjct: 692 VPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTR-----NSGLPIRIMKNLRVCGDCHS 746

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SK++    V+RD+ RFH FE G CSC DYW
Sbjct: 747 AFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 234/474 (49%), Gaps = 14/474 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            H  ++K GF  DL L N LI++Y + G+   A  +FD+M +RN V+W  L+ G+ QNG 
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEWNPV-VG 151
            +    +  +M      PN F   + I+A    +     G Q+HG  +++G     V VG
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N +I+MY+KCG I+ A  +F +M  K  ++WN+MI G       +  +  +  M++ G +
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P  F   S L +C SLG +  G Q HG  I  G    V   ++ +L+  Y +   L E +
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS--VSNTLLALYAETSRLAECQ 259

Query: 272 RVFDLIEQKSVISWSSLILGYAQE-ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +VF  + ++  +SW+++I   A    +++EA+E+F ++       +     +++   +  
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVI 389
           +  +   QIHA   K     D ++ N+++  Y K G ++   E+F+ M   ++ V+W  +
Sbjct: 320 STSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 379

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCN 446
           I+GY  + L  +A+ L   M+      D   +  VLSAC+    +E   E  +   R C 
Sbjct: 380 ISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC- 438

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              ++  +   S +VD   + GR+D A      MPV+ ++  W +++S    HG
Sbjct: 439 ---LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHG 488


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/677 (37%), Positives = 398/677 (58%), Gaps = 11/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    L+D G ++H    K+GF +++ +   LI MY++ G    A ++FD M  R++
Sbjct: 225 LKACGT--LVD-GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 281

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW A++ G +QNGNA   L +  +M    +K N  T+ + +     L  +   M IH  
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY 341

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E++  V N++I+MY+K G + +A + F  M    +++WN++IA Y         
Sbjct: 342 VIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F KMQ +G  PD  T  S                +HGF++  G+      VI  ++V
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLME-DVVIGNAVV 460

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDG 317
           D Y K G L  A +VF++I  K VISW++LI GYAQ    +EA+E+++ + E + +  + 
Sbjct: 461 DMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQ 520

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               S++  +A    ++QG +IH    K    LD  V+  ++D+Y KCG + +A  LF +
Sbjct: 521 GTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P ++ VTW  II+ +G HG A++ + LF +ML + V+PD V ++++LSACSHSG VEE 
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +  F RL  +  +KP ++HY C+VD LGRAG L+ A   I+ MP++P  +IW  LL ACR
Sbjct: 641 KWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG++ELG+   + L  +D  N   YV++SNI+A+ G W   +++R LAR +GLKK  G 
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +EV++++  FY G+ +HP  ++I++ L  +  +MK  LG++    + L D++E+ KE 
Sbjct: 760 STIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK-SLGYIPDYSFVLQDVEEDEKEH 818

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   ++    +  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+
Sbjct: 819 ILTSHSERLAIAFGII----STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDS 874

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G+CSCGDYW
Sbjct: 875 NRFHHFKDGICSCGDYW 891



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 275/523 (52%), Gaps = 11/523 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  LV  G    + ++  L+++YA  G+++ +   FD++ +++V +W +++  ++ NG+
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 94  AKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               +  F Q+   S ++P+ +T    +KA G L    +G +IH    K GF+WN  V  
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNVFVAA 254

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I MYS+ G    A  +FD MP + + +WNAMI+G +  G + + L +  +M+  G   
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  T  S L  C  LG +     IH ++I  G  + +   ++ +L++ Y K G L +AR+
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL--FVSNALINMYAKFGNLEDARK 372

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F  +    V+SW+S+I  Y Q ++   A   F +++    Q D   L S+  + A    
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 333 VEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  + +H +  +    + D  + N++VDMY K GL+D A ++F  + VK+V++W  +IT
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492

Query: 392 GYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           GY ++GLA EA+ +++ M    ++ P+   ++++L A +H G +++      R+     +
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIK-TNL 551

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV-G 509
              +   +C++D  G+ GRL +A +L   +P + S+  W  ++S   +HG  E   ++ G
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFG 610

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           E+L      + V +V + +  + +G   E +   +L +  G+K
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK 653


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/738 (36%), Positives = 406/738 (55%), Gaps = 55/738 (7%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S S   +        + C +   +  G   H   +  GF  ++ + N L+ MY++C  ++
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKAS 123
            A  VFD+M   +VVSW +++  + + G  K  L +F +M +    +P+  TL   +   
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             L +   G Q+H   + S    N  VGN ++DMY+KCG ++EA  +F  M  K +++WN
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEH----------------------------------- 208
           AM+AGY   G  +  + LF KMQE                                    
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK-------TVIAGSLVDFY 261
           G  P+E T  S L  C S+G++  G +IH + I   +P  ++        ++   L+D Y
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMY 417

Query: 262 VKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DG 317
            KC  +  AR +FD +  +++ V++W+ +I GY+Q  +  +A+EL  ++ E   Q   + 
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAK-VPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
           F +S  +   A  A +  GKQIHAYA +   + +   VSN ++DMY KCG I +A  +F+
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  KN VTWT ++TGYG HG  +EA+G+F +M     + DGV  L VL ACSHSG++++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             EYF+R+     + P  EHY+C+VD LGRAGRL+ A  LIE MP++P   +W   LS C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+HG +ELG    E +  L  ++  +Y ++SN++A+AG W +  R+R L R KG+KK  G
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWVE  K    F+ GD THP  ++I+QVL++  +R+K ++G+V    +ALHD+ +E K+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK-DIGYVPETGFALHDVDDEEKD 776

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + L  HSEK    LAL  G L    G  IR+ KNLRVCGDCH     +S+I+    ++RD
Sbjct: 777 DLLFEHSEK----LALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRD 832

Query: 677 ATRFHRFEGGVCSCGDYW 694
           ++RFH F+ G CSC  YW
Sbjct: 833 SSRFHHFKNGSCSCKGYW 850



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 260/538 (48%), Gaps = 59/538 (10%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN--VVSWTALMCGFLQN 91
           +H  L+  G    L L + LI  Y   G ++ A ++  +    +  V  W +L+  +  N
Sbjct: 47  IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G A  CL LF  M S S  P+ +T     KA G +SSV  G   H + + +GF  N  VG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGE 210
           N+++ MYS+C  +++A ++FD M    +++WN++I  Y   G     L +F +M  E G 
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
            PD  T  + L  C SLG+   G Q+H F +TS     ++ +  G+ LVD Y KCG + E
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM---IQNMFVGNCLVDMYAKCGMMDE 282

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  VF  +  K V+SW++++ GY+Q     +A+ LF +++E  +++D    S+ +  +A 
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342

Query: 330 FAL-----------------------------------VEQGKQIHAYAAKVP------- 347
             L                                   +  GK+IH YA K P       
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKHGLAKEAVGL 405
            G +  V N ++DMY KC  +D A  +F+ +  K  +VVTWTV+I GY +HG A +A+ L
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462

Query: 406 FRKMLLDDVE--PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             +M  +D +  P+       L AC+    +   ++  +    +++    +   +C++D 
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDM 522

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDG 517
             + G + +A+ + ++M  K  +  W +L++   +HG     L +  E+  I  +LDG
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDG 579


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 402/687 (58%), Gaps = 8/687 (1%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           +S+ + +A  ++  ++   L+ G QLH  L++ G   +  L+N  +++Y+KCGE++    
Sbjct: 72  LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FDKM +RN+VSWT+++ GF  N   +  LS FCQM        +F LS+ ++A   L +
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           ++ G Q+H + +K GF     VG+++ DMYSKCG +++A + F+ MP K  + W +MI G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +V  G   K L  + KM       D+    STL AC +L +   G  +H  ++  GF Y 
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEY- 310

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ-KSVISWSSLILGYAQEENLAEAMELFRQ 307
            +T I  +L D Y K G +V A  VF +     S++S +++I GY + + + +A+  F  
Sbjct: 311 -ETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVD 369

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           LR R ++ + F  +S++   A+ A +E G Q+H    K     D  VS+++VDMY KCGL
Sbjct: 370 LRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGL 429

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            D + +LF+E+   + + W  ++  + +HGL + A+  F  M+   ++P+ V ++ +L  
Sbjct: 430 FDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKG 489

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+G+VE+   YFS +     + P+ EHYSC++D LGRAG+L EA++ I +MP +P++ 
Sbjct: 490 CSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVF 549

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W + L AC++HGD+E  +   + L++L+ +N   +V++SNI+A    W + + LRK+ +
Sbjct: 550 GWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIK 609

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
              + K+ G SWV++  + H F   D +HP  ++I++ L  +  ++K  +G+V   +  L
Sbjct: 610 DGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIK-RIGYVPQTESVL 668

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            D+ +  KE+ L  HSE++A+  +L    L    G  I V KNLRVC DCH  +K +SK+
Sbjct: 669 IDMDDNLKEKLLHYHSERIAVAFSL----LTCPTGMPIIVKKNLRVCSDCHSALKFISKV 724

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +   +VRD +RFH F  G CSCGDYW
Sbjct: 725 TERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 122/234 (52%), Gaps = 1/234 (0%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M  V+  +  ++  L  +L  CS      +G  LH  ++K+GF ++  + N L DMY+K 
Sbjct: 266 MKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKS 325

Query: 61  GEMNGACAVFDKMLE-RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           G+M  A  VF    +  ++VS TA++ G+++    +  LS F  +    ++PNEFT ++ 
Sbjct: 326 GDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL 385

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           IKA    + +E+G Q+HG  +K  F+ +P V ++++DMY KCG  + + ++FD +     
Sbjct: 386 IKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE 445

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           I WN ++  +   G     +  F  M   G  P+  TF + LK C   G V  G
Sbjct: 446 IAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG 499


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/738 (35%), Positives = 412/738 (55%), Gaps = 63/738 (8%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C +      G   HG +   GF  ++ + N L+ MY++CG +  A  +FD++ 
Sbjct: 158 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 217

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMG------SSSVKPNEFTLSTNIKASGV 125
           +R   +V+SW +++   +++ NA   L LF +M        ++ + +  ++   + A G 
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L +V    ++HG  +++G   +  VGN++ID Y+KCG +  A ++F++M  K +++WNAM
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           +AGY                              V+AGYS +G     L LFR+M   G 
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGF-----LITSGFPYSVKT---VIAGSLVDFYV 262
           +P+  T  S L AC SLG+   GT+IH +     L+T    +  +    ++  +L+D Y 
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457

Query: 263 KCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DGF 318
           KC     AR +FD I  E+++V++W+ +I G+AQ  +  +A++LF ++      V  + +
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFN 376
            +S ++   A  A +  GKQIHAY  +      ++  V+N ++DMY KCG +D A  +F+
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+ ++WT ++TGYG HG   EA+ +F KM      PD + +L VL ACSH G+V++
Sbjct: 578 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 637

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              YF  +  D  + PR EHY+C +D L R+GRLD+A   ++ MP++P+  +W  LLSAC
Sbjct: 638 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RVH ++EL       L+ ++ +N  +Y ++SNI+A AG W +  R+R L +  G+KK  G
Sbjct: 698 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 757

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ EE K 
Sbjct: 758 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK-AMGYVPETNFALHDVDEEEKN 816

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    VVRD
Sbjct: 817 NLLVEHSEKLALAYGL----LTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRD 872

Query: 677 ATRFHRFEGGVCSCGDYW 694
            +RFH F+ G CSCG YW
Sbjct: 873 PSRFHHFKNGSCSCGGYW 890



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 259/524 (49%), Gaps = 64/524 (12%)

Query: 37  ALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKA 96
           AL    F     L   ++  Y  CG  + A  V +++     V W  L+   ++ G   +
Sbjct: 79  ALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDS 138

Query: 97  CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIID 156
            +++ C+M  +  +P+ FTL   +KA G L S   G   HG+   +GFE N  + N+++ 
Sbjct: 139 AINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVA 198

Query: 157 MYSKCGRINEAARMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QE 207
           MYS+CG + EA+ +FD +  + +   I+WN++++ +V +  +   L LF KM      + 
Sbjct: 199 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 258

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG-FPYSVKTVIAGSLVDFYVKCGC 266
             E  D  +  + L ACGSL +V    ++HG  I +G FP      +  +L+D Y KCG 
Sbjct: 259 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP---DVFVGNALIDAYAKCGL 315

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD---------G 317
           +  A +VF+++E K V+SW++++ GY+Q  N   A ELF+ +R+ ++ +D         G
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 375

Query: 318 F--------------------------VLSSMMGVFADFALVEQGKQIHAYAAKV----- 346
           +                           + S++   A      QG +IHAY+ K      
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 435

Query: 347 -----PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLA 399
                    D  V N+++DMY KC     A  +F+++P+  +NVVTWTV+I G+ ++G +
Sbjct: 436 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 495

Query: 400 KEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            +A+ LF +M+ +   V P+      +L AC+H   +   ++  + +    R +      
Sbjct: 496 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 555

Query: 458 S-CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           + C++D   + G +D A+++ +SM  K +I+ W ++++   +HG
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG 598



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 32/319 (10%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGF------------------PYSVKTVIAGSLV 258
           F S LK C S  +V    QIH  +I SG                   P+     +   +V
Sbjct: 40  FASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 96

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y+ CG    A  V + +     + W+ LI  + ++  L  A+ +  ++     + D F
Sbjct: 97  ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 156

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L  ++    +      G   H          +  + N++V MY +CG ++EA+ +F+E+
Sbjct: 157 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 216

Query: 379 P---VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL------DDVEPDGVAYLAVLSACS 429
               + +V++W  I++ + K   A  A+ LF KM L       +   D ++ + +L AC 
Sbjct: 217 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 276

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
               V +++E       +    P +   + ++D+  + G ++ A  +   M  K  ++ W
Sbjct: 277 SLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS-W 334

Query: 490 QTLLSACRVHGDLELGREV 508
             +++     G+ E   E+
Sbjct: 335 NAMVAGYSQSGNFEAAFEL 353


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/668 (36%), Positives = 382/668 (57%), Gaps = 8/668 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L+ G ++HG  ++     D+++   L+ MYAKCGE   A  +F  +  R++V+W+A++  
Sbjct: 345  LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             +Q G  +  LSLF +M +  +KPN  TL + + A   LS ++ G  IH   +K+  + +
Sbjct: 405  LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 148  PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
               G +++ MY+KCG    A   F+ M ++ ++TWN++I GY   G     + +F K++ 
Sbjct: 465  LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 208  HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
                PD  T    + AC  L  +  GT IHG ++  GF       +  +L+D Y KCG L
Sbjct: 525  SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH--VKNALIDMYAKCGSL 582

Query: 268  VEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
              A  +F+  +  K  ++W+ +I  Y Q  +  EA+  F Q+R  +   +     S++  
Sbjct: 583  PSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA 642

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A  A   +G   HA   ++    +T V NS++DMY KCG +D + +LFNEM  K+ V+W
Sbjct: 643  AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSW 702

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
              +++GY  HG    A+ LF  M    V+ D V++++VLSAC H+GLVEE ++ F  + +
Sbjct: 703  NAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSD 762

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
               +KP +EHY+C+VD LGRAG  DE    I+ MPV+P   +W  LL +CR+H +++LG 
Sbjct: 763  KYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGE 822

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
               + L++L+  NP ++V++S+I+A +G W +  + R      GLKK  G SWVE+  ++
Sbjct: 823  VALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKV 882

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F  GD +HP  E +H +   + ++M E++G+V      L +++EE KE  L  HSE+L
Sbjct: 883  HAFRVGDKSHPQLESMHLLWNTLLEKM-EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERL 941

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            AI  AL    LN  PG  I++ KNLRVC DCH   K +SKI     +VRDATRFH FE G
Sbjct: 942  AITFAL----LNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997

Query: 687  VCSCGDYW 694
            +CSC DYW
Sbjct: 998  ICSCNDYW 1005



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 253/471 (53%), Gaps = 13/471 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG + +  FS    ++N LID+Y+KCG+++ A  VFD+M++++ VSW  +M G+  NG 
Sbjct: 252 IHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF +M   +V+ N+ +  +   A+     +E G +IHG  ++   + + +V   
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++ MY+KCG   +A ++F  +  + L+ W+A+IA  V  GY ++ L LF++MQ     P+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  S L AC  L  +  G  IH F + +     + T  A  LV  Y KCG    A   
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA--LVSMYAKCGFFTAALTT 487

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL- 332
           F+ +  + +++W+SLI GYAQ  +   A+++F +LR  ++  D     +M+GV    AL 
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDA---GTMVGVVPACALL 544

Query: 333 --VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVI 389
             ++QG  IH    K+    D  V N+++DMY KCG +  A  LFN+    K+ VTW VI
Sbjct: 545 NDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I  Y ++G AKEA+  F +M L++  P+ V +++VL A ++     E   + + +     
Sbjct: 605 IAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGF 664

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +   +   S ++D   + G+LD ++ L   M  K +++ W  +LS   VHG
Sbjct: 665 LSNTLVGNS-LIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHG 713



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 213/411 (51%), Gaps = 4/411 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+  L L  GV  HG + + G   D+ +   L+DMY+K G++  A  VFDKM +R+V
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDV 195

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G  Q+ +    +  F  M    V+P+  +L         LS++E    IHG 
Sbjct: 196 VAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGY 255

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +  F  +  V N +ID+YSKCG ++ A R+FD M  +  ++W  M+AGY   G   + 
Sbjct: 256 VFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEV 313

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF KM+      ++ +  S   A      +  G +IHG  +       +  ++A  L+
Sbjct: 314 LELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI--LVATPLM 371

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG   +A+++F  ++ + +++WS++I    Q     EA+ LF++++ + ++ +  
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   AD +L++ GK IH +  K     D S   ++V MY KCG    A   FN M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
             +++VTW  +I GY + G    A+ +F K+ L  + PD    + V+ AC+
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  L   L  C+   LL  G  +H   VK     DL     L+ MYAKCG    A   F+
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +M  R++V+W +L+ G+ Q G+    + +F ++  S++ P+  T+   + A  +L+ ++ 
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYV 190
           G  IHG+ +K GFE +  V N++IDMY+KCG +  A  +F+     K  +TWN +IA Y+
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G++ + +  F +M+     P+  TF S L A   L +   G   H  +I  GF  +  
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN-- 667

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           T++  SL+D Y KCG L  + ++F+ ++ K  +SW++++ GYA   +   A+ LF  ++E
Sbjct: 668 TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
             +Q+D     S++       LVE+G++I H+ + K     D      +VD+  + GL D
Sbjct: 728 SQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787

Query: 370 EATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           E       MPV+ +   W  ++     H   K  +G      L  +EP   A+  VLS+
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK--LGEVALDHLVKLEPRNPAHFVVLSS 844



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 241/495 (48%), Gaps = 20/495 (4%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q+H  ++  GF     + + LI++Y+   + + A +VFD     + + W +++  + ++
Sbjct: 49  LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                 L ++  M    ++P+++T +  +KA     +++ G+  HG   + G E +  +G
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
             ++DMYSK G +  A  +FD MP + ++ WNAMIAG   +    + +  FR MQ  G  
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P   +  +       L ++     IHG++    F     + ++  L+D Y KCG +  AR
Sbjct: 228 PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF----SSAVSNGLIDLYSKCGDVDVAR 283

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           RVFD +  +  +SW +++ GYA      E +ELF +++  +++++     S     A+  
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E+GK+IH  A +     D  V+  ++ MY KCG  ++A +LF  +  +++V W+ II 
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE--ESQEYFSRLCNDKR 449
              + G  +EA+ LF++M    ++P+ V  +++L AC+   L++  +S   F+   +   
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD--- 460

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           M   +   + +V    + G    A      M  +  I  W +L     ++G  ++G    
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSL-----INGYAQIGDPYN 514

Query: 510 EI----LLRLDGDNP 520
            I     LRL   NP
Sbjct: 515 AIDMFYKLRLSAINP 529


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/681 (37%), Positives = 409/681 (60%), Gaps = 22/681 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C++   +  G+  HG  +K+G   +L +N+ L+DMY+KCG +  A  +FD   E+NV+SW
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN-EKNVISW 367

Query: 82  TALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQ------ 134
            +++ G+ ++ + +    L  +M     VK NE TL        VL   E  +Q      
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLN------VLPVCEEEIQFLKLKE 421

Query: 135 IHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           IHG  ++ GF + + +V N+ +  Y+KCG ++ A  +F  M +K + +WNA+I G+V  G
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  K L L+  M+  G  PD FT  S L AC  L S+  G +IHG ++ +GF   +   I
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF--ELDEFI 539

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLV  YV+CG ++ A+  FD +E+K+++ W+++I G++Q E   +A+++F Q+    +
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKI 599

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   +   +G  +  + +  GK++H +A K      + V+ S++DMY KCG ++++  
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ + +K  VTW V+ITGYG HG  ++A+ LF+ M      PD V ++A+L+AC+H+GL
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V E  EY  ++ +   +KP++EHY+C+VD LGRAGRL+EA  L+  +P KP   IW +LL
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           S+CR + DL++G +V   LL L  D   NYV++SN +A  G W+E  ++R+  +  GL+K
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
            AG SW+E+  ++  F  GD++   + KI Q  +E+EK++  ++G+       LH+++E+
Sbjct: 840 DAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKI-NKIGYKPDTSCVLHELEED 898

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            K + LR HSEKLAI   L    LN   G  +RV KNLR+C DCH  IK +SKI K   +
Sbjct: 899 EKIKILRNHSEKLAISFGL----LNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREII 954

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD  RFH F+ G CSCGDYW
Sbjct: 955 VRDNKRFHHFKNGFCSCGDYW 975



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 258/502 (51%), Gaps = 19/502 (3%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGE 62
           VS S    +Q +   L+ C +   ++ G ++H  +     F  D++L   L+ MY+ C  
Sbjct: 85  VSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDS 144

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIK 121
              +C VF+    +N+  W AL+ G+L+N   +  + +F +M S +   P+ FTL   IK
Sbjct: 145 PYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIK 204

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A   +  V  G  +HG  +K+    +  VGN++I MY K G +  A ++FD MP ++L++
Sbjct: 205 ACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVS 264

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           WN+++   +  G  ++   LF+ +   + G +PD  T  + +  C   G V  G   HG 
Sbjct: 265 WNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGL 324

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            +  G    +K  +  SL+D Y KCG L EAR +FD   +K+VISW+S+I GY+++ +  
Sbjct: 325 ALKLGLCGELK--VNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFR 381

Query: 300 EAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVS 355
            A EL R+++ E  ++V+   L +++ V  +     + K+IH YA +   + S  D  V+
Sbjct: 382 GAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQS--DELVA 439

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+ V  Y KCG +  A  +F  M  K V +W  +I G+ ++G  ++A+ L+  M    +E
Sbjct: 440 NAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE 499

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI--VDSLGRAGRLDEA 473
           PD     ++LSAC+    +   +E    +    R    ++ + CI  V    + G++  A
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSML---RNGFELDEFICISLVSLYVQCGKILLA 556

Query: 474 KNLIESMPVKPSIAIWQTLLSA 495
           K   ++M  K ++  W T+++ 
Sbjct: 557 KLFFDNMEEK-NLVCWNTMING 577



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 2/276 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C++   L  G ++HG++++ GF  D  +   L+ +Y +CG++  A   FD M 
Sbjct: 505 IASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME 564

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+N+V W  ++ GF QN      L +F QM SS + P+E ++   + A   +S++  G +
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +KS    +  V  S+IDMY+KCG + ++  +FD +  K  +TWN +I GY + G+
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGH 684

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K + LF+ MQ  G  PD  TF + L AC   G V  G +  G  + S F    K    
Sbjct: 685 GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLG-QMQSLFGIKPKLEHY 743

Query: 255 GSLVDFYVKCGCLVEA-RRVFDLIEQKSVISWSSLI 289
             +VD   + G L EA   V +L ++     WSSL+
Sbjct: 744 ACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 246/664 (37%), Positives = 397/664 (59%), Gaps = 9/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           ++H  L+K        +  +L++  A      M+ A ++F ++ E +  ++  ++ GF  
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
             +    + LF +M  +SV+P+EFT    +K    L ++  G QIH + MK GF  +  V
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I MY+ CG +  A R+FD M  +++ TWN+M AGY  +G  ++ + LF +M E   
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             DE T  S L ACG L  +  G  I+ ++   G   +    +  SLVD Y KCG +  A
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN--PTLITSLVDMYAKCGQVDTA 279

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RR+FD ++++ V++WS++I GY+Q     EA++LF ++++ ++  +   + S++   A  
Sbjct: 280 RRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVL 339

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +E GK +H +  K    L  ++  +++D Y KCG ++ + E+F +MPVKNV++WTV+I
Sbjct: 340 GALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLI 399

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G   +G  K+A+  F  ML  +VEP+ V ++ VLSACSH+GLV+E ++ F  +  D  +
Sbjct: 400 QGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGI 459

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +PRIEHY C+VD LGRAG ++EA   I++MP++P+  IW+TLL++C+VH ++E+G E  +
Sbjct: 460 EPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLK 519

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ L+  +  +Y+++SNI+A  G W +  ++R   + KG+KK  G S +E+D  IH F+
Sbjct: 520 QLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFF 579

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D+ H  +E+I+  + +M K++K   G+V     A  D +E+ KE S+  HSEKLAI  
Sbjct: 580 AEDNVHSQSEEIYNAIEDMMKQIKSA-GYVPNTAEARLDAEEDDKESSVSHHSEKLAIAF 638

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L++      PG  IR+ KNLRVC DCH   K +SK+     VVRD TRFH F+ G CSC
Sbjct: 639 GLIKS----PPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSC 694

Query: 691 GDYW 694
            DYW
Sbjct: 695 NDYW 698



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 210/381 (55%), Gaps = 6/381 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS+   L  G Q+H  ++K GF     + N LI MYA CGE+  A  VFD+M ERNV
Sbjct: 131 LKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNV 190

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +W ++  G+ ++GN +  + LF +M    ++ +E TL + + A G L+ +E G  I+  
Sbjct: 191 RTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRY 250

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             + G + NP +  S++DMY+KCG+++ A R+FD M  + ++ W+AMI+GY  A    + 
Sbjct: 251 VEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREA 310

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +MQ+    P+E T  S L +C  LG++  G  +H F+       +V   +  +L+
Sbjct: 311 LDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTV--TLGTALM 368

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           DFY KCG +  +  VF  +  K+V+SW+ LI G A      +A+E F  + E++++ +  
Sbjct: 369 DFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDV 428

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   +   LV++G+ +    ++   G++  + +   +VD+  + GLI+EA +   
Sbjct: 429 TFIGVLSACSHAGLVDEGRDLFVSMSR-DFGIEPRIEHYGCMVDILGRAGLIEEAFQFIK 487

Query: 377 EMPVK-NVVTWTVIITGYGKH 396
            MP++ N V W  ++     H
Sbjct: 488 NMPIQPNAVIWRTLLASCKVH 508



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 2/295 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C +   L+ G  ++  + + G   +  L   L+DMYAKCG+++ A  +FD+M 
Sbjct: 228 LVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD 287

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VV+W+A++ G+ Q    +  L LF +M  +++ PNE T+ + + +  VL ++E G  
Sbjct: 288 RRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKW 347

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K   +    +G +++D Y+KCG +  +  +F  MP K++++W  +I G    G 
Sbjct: 348 VHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQ 407

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K L  F  M E    P++ TF   L AC   G V  G  +    ++  F    +    
Sbjct: 408 GKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLF-VSMSRDFGIEPRIEHY 466

Query: 255 GSLVDFYVKCGCLVEA-RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           G +VD   + G + EA + + ++  Q + + W +L+      +N+    E  +QL
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/688 (35%), Positives = 403/688 (58%), Gaps = 8/688 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV +   +   +  C+    +  G+ +HG   K+G + ++ +NN L+DMY+KCG +  A 
Sbjct: 295 LVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEAR 354

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVL 126
           A+FD    +NVVSW  ++ G+ + G+ +    L  +M     V+ NE T+   + A    
Sbjct: 355 ALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGE 414

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             + +  +IHG   + GF  + +V N+ +  Y+KC  ++ A R+F  M  K++ +WNA+I
Sbjct: 415 HQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALI 474

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
             +   G+  K L LF  M + G  PD FT  S L AC  L  +  G +IHGF++ +G  
Sbjct: 475 GAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGL- 533

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +   I  SL+  Y++C  ++  + +FD +E KS++ W+ +I G++Q E   EA++ FR
Sbjct: 534 -ELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFR 592

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           Q+    ++     ++ ++G  +  + +  GK++H++A K     D  V+ +++DMY KCG
Sbjct: 593 QMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCG 652

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            ++++  +F+ +  K+   W VII GYG HG   +A+ LF  M      PD   +L VL 
Sbjct: 653 CMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLI 712

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           AC+H+GLV E  +Y  ++ N   +KP++EHY+C+VD LGRAG+L EA  L+  MP +P  
Sbjct: 713 ACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDS 772

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            IW +LLS+CR +GDLE+G EV + LL L+ +   NYV++SN++A  G W+E  ++R+  
Sbjct: 773 GIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRM 832

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           +  GL K AG SW+E+   ++ F   D +   ++KI Q  +++EK++  ++G+       
Sbjct: 833 KENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKI-SKIGYKPDTSCV 891

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           LH+++EE K + L+ HSEKLAI   L    LN   G  +RV KNLR+C DCH  IK +SK
Sbjct: 892 LHELEEEGKIKILKSHSEKLAISFGL----LNTAKGTTLRVCKNLRICVDCHNAIKLVSK 947

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           ++K   +VRD  RFH F+ G+C+CGD+W
Sbjct: 948 VVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 258/512 (50%), Gaps = 11/512 (2%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           + C+    ++ G  +H   +K G   D  + N LI MY KCG +  A  VF+ M  RN+V
Sbjct: 203 KACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLV 262

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSS---VKPNEFTLSTNIKASGVLSSVENGMQIH 136
           SW ++M    +NG    C  +F ++  S    + P+  T+ T I A   +  V  GM +H
Sbjct: 263 SWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVH 322

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G+  K G      V NS++DMYSKCG + EA  +FD+   K++++WN +I GY   G   
Sbjct: 323 GLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFR 382

Query: 197 KGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
               L ++MQ   ++  +E T  + L AC     +    +IHG+    GF      ++A 
Sbjct: 383 GVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKD--ELVAN 440

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           + V  Y KC  L  A RVF  +E K+V SW++LI  +AQ     ++++LF  + +  +  
Sbjct: 441 AFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDP 500

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F + S++   A    +  GK+IH +  +    LD  +  S++ +Y++C  +     +F
Sbjct: 501 DRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIF 560

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           ++M  K++V W V+ITG+ ++ L  EA+  FR+ML   ++P  +A   VL ACS    + 
Sbjct: 561 DKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALR 620

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             +E  S     K         +C ++D   + G +++++N+ + +  K   A+W  +++
Sbjct: 621 LGKEVHSFAL--KAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDE-AVWNVIIA 677

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
              +HG      E+ E L++  G  P ++  +
Sbjct: 678 GYGIHGHGLKAIELFE-LMQNKGGRPDSFTFL 708



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 227/418 (54%), Gaps = 10/418 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           LR C  +  +  G ++H ALV        D++L+  +I MY+ CG  + +  VFD   E+
Sbjct: 99  LRACGHHKNIHVGRKVH-ALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQI 135
           ++  + AL+ G+ +N   +  +SLF ++ S++ + P+ FTL    KA   ++ VE G  +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H + +K+G   +  VGN++I MY KCG +  A ++F+ M  ++L++WN+++      G  
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 196 DKGLLLFRKM---QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            +   +F+++   +E G +PD  T  + + AC ++G V  G  +HG     G    V   
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV--T 335

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RER 311
           +  SLVD Y KCG L EAR +FD+   K+V+SW+++I GY++E +     EL +++ RE 
Sbjct: 336 VNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREE 395

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++V+   + +++   +    +   K+IH YA +     D  V+N+ V  Y KC  +D A
Sbjct: 396 KVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCA 455

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
             +F  M  K V +W  +I  + ++G   +++ LF  M+   ++PD     ++L AC+
Sbjct: 456 ERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 12/315 (3%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L+ACG   ++  G ++H  L+++        V++  ++  Y  CG   ++R VFD  ++K
Sbjct: 99  LRACGHHKNIHVGRKVHA-LVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQI 339
            +  +++L+ GY++     +A+ LF +L   + L  D F L  +    A  A VE G+ +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           HA A K     D  V N+++ MY KCG ++ A ++F  M  +N+V+W  ++    ++G  
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 400 KEAVGLFRKMLLDDVE---PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
            E  G+F+++L+ + E   PD    + V+ AC+  G V         L     +   +  
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHGLAFKLGITEEVTV 336

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
            + +VD   + G L EA+ L + M    ++  W T++      GD    R V E+L  + 
Sbjct: 337 NNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGDF---RGVFELLQEMQ 392

Query: 517 GDNP--VNYVMMSNI 529
            +    VN V + N+
Sbjct: 393 REEKVRVNEVTVLNV 407


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/676 (36%), Positives = 388/676 (57%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C     L  G ++HG LVK GFS DL     L +MYAKC ++N A  VFD+M ER++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+ QNG A+  L +   M   ++KP+  T+ + + A   L  +  G +IHG 
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M+SGF+    +  +++DMY+KCG +  A ++FD M  +++++WN+MI  YV      + 
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +L+F+KM + G  P + +    L AC  LG +  G  IH   +  G   +V  V   SL+
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV--NSLI 379

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F  ++ ++++SW+++ILG+AQ     +A+  F Q+R R+++ D F
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S++   A+ ++    K IH    +     +  V+ ++VDMY KCG I  A  +F+ M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V TW  +I GYG HG  K A+ LF +M    ++P+GV +L+V+SACSHSGLVE   
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           + F  +  +  ++  ++HY  +VD LGRAGRL+EA + I  MPVKP++ ++  +L AC++
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++    +  E L  L+ D+   +V+++NI+  A  W +  ++R     +GL+K  G S
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H F+ G   HP ++KI+  L ++   +KE  G+V      L  ++ + KE+ 
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA-GYVPDTNLVL-GVENDVKEQL 737

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L    LN   G  I V KNLRVC DCH   K +S +     VVRD  
Sbjct: 738 LSTHSEKLAISFGL----LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 252/492 (51%), Gaps = 14/492 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+   + K G   +      L+ ++ + G ++ A  VF+ +  +  V +  ++ GF +  
Sbjct: 55  QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +    L  F +M    V+P  +  +  +K  G  + +  G +IHG+ +KSGF  +     
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            + +MY+KC ++NEA ++FD MP + L++WN ++AGY   G +   L + + M E    P
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
              T  S L A  +L  +  G +IHG+ + SGF   V   I+ +LVD Y KCG L  AR+
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQ 292

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++V+SW+S+I  Y Q EN  EAM +F+++ +  ++     +   +   AD   
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E+G+ IH  + ++    + SV NS++ MY KC  +D A  +F ++  + +V+W  +I G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCNDKR 449
           + ++G   +A+  F +M    V+PD   Y++V++A +   +   ++       R C DK 
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK- 471

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELG 505
               +   + +VD   + G +  A+ LI  M  +  +  W  ++     HG     LEL 
Sbjct: 472 ---NVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527

Query: 506 REVGEILLRLDG 517
            E+ +  ++ +G
Sbjct: 528 EEMQKGTIKPNG 539



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 176/314 (56%), Gaps = 6/314 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           SS++   QI  +  K+G          ++ ++ + G ++EAAR+F+ + +K  + ++ M+
Sbjct: 48  SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G+      DK L  F +M+     P  + FT  LK CG    +  G +IHG L+ SGF 
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF- 166

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+       L + Y KC  + EAR+VFD + ++ ++SW++++ GY+Q      A+E+ +
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLK 364
            + E +L+     + S++   +   L+  GK+IH YA +  SG D+  ++S ++VDMY K
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR--SGFDSLVNISTALVDMYAK 283

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ++ A +LF+ M  +NVV+W  +I  Y ++   KEA+ +F+KML + V+P  V+ +  
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343

Query: 425 LSACSHSGLVEESQ 438
           L AC+  G +E  +
Sbjct: 344 LHACADLGDLERGR 357



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 4/265 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L+ G  +H   V++G   ++ + N LI MY KC E++ A ++F K+  R 
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW A++ GF QNG     L+ F QM S +VKP+ FT  + I A   LS   +   IHG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + M+S  + N  V  +++DMY+KCG I  A  +FD+M  + + TWNAMI GY   G+   
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF +MQ+    P+  TF S + AC   G V  G +   +++   +   +     G++
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAM 581

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSV 282
           VD   + G L EA   +D I Q  V
Sbjct: 582 VDLLGRAGRLNEA---WDFIMQMPV 603


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/690 (36%), Positives = 408/690 (59%), Gaps = 9/690 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           +  +V +   ++  LR C     ++ G  +HG + K+G   D+++NN L+ MY K   + 
Sbjct: 209 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 268

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
               +FDKM+ R+ VSW  ++CG+ Q G  +  + LF +M  +  KP+  T+++ ++A G
Sbjct: 269 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACG 327

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L  +E G  +H   + SG+E +    N +I+MY+KCG +  +  +F  M  K  ++WN+
Sbjct: 328 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 387

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI  Y+  G  D+ + LF+ M+   + PD  T+   L     LG +  G ++H  L   G
Sbjct: 388 MINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMG 446

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F  ++  V++ +LVD Y KCG + ++ +VF+ ++ + +I+W+++I      E+    + +
Sbjct: 447 FNSNI--VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 504

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
             ++R   +  D   + S++ V +  A   QGK+IH    K+    D  V N +++MY K
Sbjct: 505 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 564

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +  + ++F  M  K+VVTWT +I+  G +G  K+AV  F +M    + PD VA++A+
Sbjct: 565 CGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAI 624

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           + ACSHSGLVEE   YF R+  D +++PRIEHY+C+VD L R+  LD+A++ I SMP+KP
Sbjct: 625 IFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 684

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
             +IW  LLSACR+ GD E+   V E ++ L+ D+   YV++SNI+A  G W++   +RK
Sbjct: 685 DSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRK 744

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
             +++GLKK  G SW+E+  +++ F  G       E+++++L  +   M +E G++  ++
Sbjct: 745 SIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE-GYIANLQ 803

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + LHDI E+ K + L  HSE+LAI   L    LN +PG  ++V KNLRVC DCH   K +
Sbjct: 804 FVLHDIDEDEKRDILCGHSERLAIAFGL----LNTKPGTPLQVMKNLRVCEDCHTVTKYI 859

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SKI++   +VRDA RFH F+ G CSCGDYW
Sbjct: 860 SKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 264/509 (51%), Gaps = 21/509 (4%)

Query: 5   SFSLVSERQRL---------ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           + SL SE QR+            +  C+  L  +    +H  ++ MGF  DL + N LID
Sbjct: 99  ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALID 158

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY +  +++ A  VF++M  R+VVSW +L+ G+  NG     L ++ +  +  V P+ +T
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 218

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +S+ ++A G L SVE G  IHG+  K G + + +V N ++ MY K   + +  R+FD M 
Sbjct: 219 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 278

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            +  ++WN MI GY   G  ++ + LF +M    + PD  T TS L+ACG LG +  G  
Sbjct: 279 LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDLEFGKY 337

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H ++ITSG  Y   T  +  L++ Y KCG L+ ++ VF  ++ K  +SW+S+I  Y Q 
Sbjct: 338 VHDYMITSG--YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQN 395

Query: 296 ENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
            +  EAM+LF+ ++   +   V   +L SM     D  L   GK++H   AK+    +  
Sbjct: 396 GSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHL---GKELHCDLAKMGFNSNIV 452

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           VSN++VDMY KCG + ++ ++F  M  ++++TW  II            + +  +M  + 
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 512

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDE 472
           V PD    L++L  CS      + +E     C  K  ++  +   + +++   + G L  
Sbjct: 513 VTPDMATMLSILPVCSLLAAKRQGKEIHG--CIFKLGLESDVPVGNVLIEMYSKCGSLRN 570

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           +  + + M  K  +  W  L+SAC ++G+
Sbjct: 571 SFQVFKLMKTK-DVVTWTALISACGMYGE 598



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 259/499 (51%), Gaps = 14/499 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD-KMLERNVVSWTALMCGFLQN 91
           +LH  ++ +G    ++ +  LI  YA   +   + +VF       NV  W +++     N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     LSL+ +     ++P+ +T  + I A   L   E    IH   +  GF  +  +G
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++IDMY +   +++A ++F+ MP + +++WN++I+GY   GY ++ L ++ + +  G +
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD +T +S L+ACG LGSV  G  IHG +   G    V  ++   L+  Y K   L++ R
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV--IVNNGLLSMYCKFNGLIDGR 271

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           R+FD +  +  +SW+++I GY+Q     E+++LF ++  +  + D   ++S++       
Sbjct: 272 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLG 330

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E GK +H Y        DT+ SN +++MY KCG +  + E+F+ M  K+ V+W  +I 
Sbjct: 331 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 390

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM- 450
            Y ++G   EA+ LF KM+  DV+PD V Y+ +LS  +  G +   +E     C+  +M 
Sbjct: 391 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELH---CDLAKMG 446

Query: 451 -KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG-REV 508
               I   + +VD   + G + ++  + E+M  +  I  W T++++C    D  LG R +
Sbjct: 447 FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMI 505

Query: 509 GEILLRLDGDNPVNYVMMS 527
               +R +G  P    M+S
Sbjct: 506 SR--MRTEGVTPDMATMLS 522



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 38/361 (10%)

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E   +  F+S  +A  S  +     ++H  +IT G  +SV  + +  L+  Y        
Sbjct: 9   ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSV--IFSAKLIAKYAHFRDPTS 66

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +  VF L     +V  W+S+I         +EA+ L+ + +   LQ D +   S++   A
Sbjct: 67  SFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA 126

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                E  K IH     +  G D  + N+++DMY +   +D+A ++F EMP+++VV+W  
Sbjct: 127 GLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 186

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE------------ 436
           +I+GY  +G   EA+ ++ +     V PD     +VL AC   G VEE            
Sbjct: 187 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 246

Query: 437 -------SQEYFSRLCN-----------DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
                  +    S  C            DK +      ++ ++    + G  +E+  L  
Sbjct: 247 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM 306

Query: 479 SM--PVKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDNPVNYVMMSNIHADAG 534
            M    KP +    ++L AC   GDLE G+ V + ++    + D   + +++ N++A  G
Sbjct: 307 EMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMYAKCG 365

Query: 535 S 535
           +
Sbjct: 366 N 366


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/680 (37%), Positives = 389/680 (57%), Gaps = 47/680 (6%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSV 109
           N L+  Y+K G +     VFD M   +VVSW +L+ G+  NG     + ++  M    SV
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             N  T ST +  S     V+ G QIHG   K G++    VG+ ++DMY+K G IN+A R
Sbjct: 135 NLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANR 194

Query: 170 MFDVMPAKSLITWNAMIAGY--------------------------VLAGYSDKGLLL-- 201
           +F+ +P K+++ +N MI G                           ++ G +  GL    
Sbjct: 195 IFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEA 254

Query: 202 ---FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
              F++M   G   D+FTF S L ACG   ++  G QIH ++I +   Y     +  +L+
Sbjct: 255 VDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD--YQDNIFVGSALL 312

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A  VF  +  K+VISW+++++GY Q     EA+ +F  ++   +  D F
Sbjct: 313 DMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDF 372

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFN 376
            L S++   A+ A +E+G Q H  A  + SGL    +VSN+++ +Y KCG ++ A +LF+
Sbjct: 373 TLGSVISSCANLASLEEGAQFHGQA--LASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM +++ V+WT +++GY + G A E + LF  ML   + PDGV ++ VLSACS +GLVE+
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              YF  +  + R+ P  +HY+C++D L RAGRL+EAKN I  MP  P    W TLLS+C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R++G+LE+G+   E L +L+  NP +Y+++S+I+A  G W++  +LRK  R  G+KK  G
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW++   ++H F   D + P +++I+  L  +  +M EE G+V  + + LHD+++  K 
Sbjct: 611 HSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEE-GYVPDMSFVLHDVEKSEKI 669

Query: 617 ESLRVHSEKLAI--GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           + L  HSEKLAI  GL  +  GL       IRV KNLRVCGDCH   K +S+I +   +V
Sbjct: 670 KMLNHHSEKLAIAFGLLFIPDGLQ------IRVVKNLRVCGDCHNATKYISRITQREILV 723

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFH F+ GVCSCGD+W
Sbjct: 724 RDAVRFHLFKDGVCSCGDFW 743



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 50/462 (10%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR++FS +         L   S    +D G Q+HG + K G+   L + + L+DMYAK 
Sbjct: 136 LNRITFSTM---------LILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT 186

Query: 61  GEMNGACAVFDKMLERNVV-------------------------------SWTALMCGFL 89
           G +N A  +F+++ E+N+V                               SWT ++ G  
Sbjct: 187 GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLT 246

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG  K  +  F +MG      ++FT  + + A G   +++ G QIH   +++ ++ N  
Sbjct: 247 QNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG++++DMY KC  +  A  +F  M  K++I+W AM+ GY   GYS++ + +F  MQ + 
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+FT  S + +C +L S+  G Q HG  + SG    V   ++ +L+  Y KCG L  
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFV--TVSNALITLYGKCGSLEH 424

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A ++F  ++ +  +SW++L+ GYAQ     E + LF  +    +  DG     ++   + 
Sbjct: 425 AHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR 484

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNS---IVDMYLKCGLIDEATELFNEMPVK-NVVT 385
             LVE+G   H +   V     T + +    ++D+  + G ++EA    N+MP   + + 
Sbjct: 485 AGLVEKG--YHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIG 542

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           W  +++    +G     +G +    L  +EP   A   +LS+
Sbjct: 543 WATLLSSCRLNG--NLEIGKWAAESLHKLEPQNPASYILLSS 582



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 216/489 (44%), Gaps = 100/489 (20%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY---------------------- 189
           N++I+ Y K G +  A  +FD +P  +L +WN +++ Y                      
Sbjct: 44  NNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVV 103

Query: 190 ----VLAGYSDKGLL-----LFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGF 239
               +L+GY+  GL+     ++  M + G +  +  TF++ L    + G V  G QIHG 
Sbjct: 104 SWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQ 163

Query: 240 LITSGFPYSVKTVIAGSLVDFYVK-------------------------------CGCLV 268
           +    F Y     +   LVD Y K                               C  +V
Sbjct: 164 IFK--FGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIV 221

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA ++FD + +K  ISW+++I G  Q     EA++ F+++      +D F   S++    
Sbjct: 222 EAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACG 281

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            F  +++GKQIHAY  +     +  V ++++DMY KC  +  A  +F +M  KNV++WT 
Sbjct: 282 GFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTA 341

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY-------- 440
           ++ GYG++G ++EAV +F  M  +++ PD     +V+S+C++   +EE  ++        
Sbjct: 342 MLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASG 401

Query: 441 ---FSRLCND------------------KRMKPRIE-HYSCIVDSLGRAGRLDEAKNLIE 478
              F  + N                     MK R E  ++ +V    + G+ +E  +L E
Sbjct: 402 LICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFE 461

Query: 479 SM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NYVMMSNIHADA 533
           +M    + P    +  +LSAC   G +E G    E +++     P+  +Y  M ++ + A
Sbjct: 462 TMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRA 521

Query: 534 GSWNECERL 542
           G   E +  
Sbjct: 522 GRLEEAKNF 530



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 38/260 (14%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           +T+ LK C    +     ++H  +I +    + +T +  +L++ Y K G L  AR VFD 
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRT--LTNPETFLYNNLINTYGKLGDLKNARNVFDH 65

Query: 277 IEQKS-------------------------------VISWSSLILGYAQEENLAEAMELF 305
           I Q +                               V+SW+SL+ GYA    ++E++ ++
Sbjct: 66  IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY 125

Query: 306 R-QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
              L++ S+ ++    S+M+ + ++   V+ G+QIH    K        V + +VDMY K
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAK 185

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            G I++A  +F E+P KN+V +  +ITG  +     EA  LF  M     E D +++  +
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNM----PEKDSISWTTI 241

Query: 425 LSACSHSGLVEESQEYFSRL 444
           ++  + +GL +E+ + F  +
Sbjct: 242 ITGLTQNGLFKEAVDKFKEM 261



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 91/201 (45%), Gaps = 43/201 (21%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           Q K++H    +  +  +T + N++++ Y K G +  A  +F+ +P  N+ +W  +++ Y 
Sbjct: 23  QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYS 82

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND------- 447
           K G  ++   +F  M   DV    V++ ++LS  + +GL+ ES   ++ +  D       
Sbjct: 83  KLGYLQDMQRVFDSMPNHDV----VSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNR 138

Query: 448 -------------------KRMKPRIEHY---------SCIVDSLGRAGRLDEAKNLIES 479
                              +++  +I  +         S +VD   + G +++A  + E 
Sbjct: 139 ITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198

Query: 480 MPVKPSIAIWQTLLSA---CR 497
           +P K +I ++ T+++    CR
Sbjct: 199 IPEK-NIVVYNTMITGLLRCR 218


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/738 (35%), Positives = 412/738 (55%), Gaps = 63/738 (8%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C +      G   HG +   GF  ++ + N L+ MY++CG +  A  +FD++ 
Sbjct: 165 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 224

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMG------SSSVKPNEFTLSTNIKASGV 125
           +R   +V+SW +++   +++ NA   L LF +M        ++ + +  ++   + A G 
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L +V    ++HG  +++G   +  VGN++ID Y+KCG +  A ++F++M  K +++WNAM
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           +AGY                              V+AGYS +G     L LFR+M   G 
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGF-----LITSGFPYSVKT---VIAGSLVDFYV 262
           +P+  T  S L AC SLG+   GT+IH +     L+T    +  +    ++  +L+D Y 
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464

Query: 263 KCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DGF 318
           KC     AR +FD I  E+++V++W+ +I G+AQ  +  +A++LF ++      V  + +
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFN 376
            +S ++   A  A +  GKQIHAY  +      ++  V+N ++DMY KCG +D A  +F+
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+ ++WT ++TGYG HG   EA+ +F KM      PD + +L VL ACSH G+V++
Sbjct: 585 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 644

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              YF  +  D  + PR EHY+C +D L R+GRLD+A   ++ MP++P+  +W  LLSAC
Sbjct: 645 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RVH ++EL       L+ ++ +N  +Y ++SNI+A AG W +  R+R L +  G+KK  G
Sbjct: 705 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 764

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ EE K 
Sbjct: 765 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK-AMGYVPETNFALHDVDEEEKN 823

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    VVRD
Sbjct: 824 NLLVEHSEKLALAYGL----LTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRD 879

Query: 677 ATRFHRFEGGVCSCGDYW 694
            +RFH F+ G CSCG YW
Sbjct: 880 PSRFHHFKNGSCSCGGYW 897



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 259/524 (49%), Gaps = 64/524 (12%)

Query: 37  ALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKA 96
           AL    F     L   ++  Y  CG  + A  V +++     V W  L+   ++ G   +
Sbjct: 86  ALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDS 145

Query: 97  CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIID 156
            +++ C+M  +  +P+ FTL   +KA G L S   G   HG+   +GFE N  + N+++ 
Sbjct: 146 AINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVA 205

Query: 157 MYSKCGRINEAARMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QE 207
           MYS+CG + EA+ +FD +  + +   I+WN++++ +V +  +   L LF KM      + 
Sbjct: 206 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 265

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG-FPYSVKTVIAGSLVDFYVKCGC 266
             E  D  +  + L ACGSL +V    ++HG  I +G FP      +  +L+D Y KCG 
Sbjct: 266 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP---DVFVGNALIDAYAKCGL 322

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD---------G 317
           +  A +VF+++E K V+SW++++ GY+Q  N   A ELF+ +R+ ++ +D         G
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 382

Query: 318 F--------------------------VLSSMMGVFADFALVEQGKQIHAYAAKV----- 346
           +                           + S++   A      QG +IHAY+ K      
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 442

Query: 347 -----PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLA 399
                    D  V N+++DMY KC     A  +F+++P+  +NVVTWTV+I G+ ++G +
Sbjct: 443 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 502

Query: 400 KEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            +A+ LF +M+ +   V P+      +L AC+H   +   ++  + +    R +      
Sbjct: 503 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV 562

Query: 458 S-CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           + C++D   + G +D A+++ +SM  K +I+ W ++++   +HG
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG 605



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 32/319 (10%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGF------------------PYSVKTVIAGSLV 258
           F S LK C S  +V    QIH  +I SG                   P+     +   +V
Sbjct: 47  FASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVV 103

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y+ CG    A  V + +     + W+ LI  + ++  L  A+ +  ++     + D F
Sbjct: 104 ASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 163

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L  ++    +      G   H          +  + N++V MY +CG ++EA+ +F+E+
Sbjct: 164 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 223

Query: 379 P---VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL------DDVEPDGVAYLAVLSACS 429
               + +V++W  I++ + K   A  A+ LF KM L       +   D ++ + +L AC 
Sbjct: 224 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACG 283

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
               V +++E       +    P +   + ++D+  + G ++ A  +   M  K  ++ W
Sbjct: 284 SLKAVPQTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS-W 341

Query: 490 QTLLSACRVHGDLELGREV 508
             +++     G+ E   E+
Sbjct: 342 NAMVAGYSQSGNFEAAFEL 360


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/669 (35%), Positives = 388/669 (57%), Gaps = 8/669 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +LD G ++H   V+ G + D+ +   L+ M  +CG+++ A   F  + +R+VV + AL+ 
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIA 303

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
              Q+G+       + +M S  V  N  T  + + A     ++E G  IH    + G   
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSS 363

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  +GN++I MY++CG + +A  +F  MP + LI+WNA+IAGY       + + L+++MQ
Sbjct: 364 DVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQ 423

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P   TF   L AC +  +   G  IH  ++ SG   +    +A +L++ Y +CG 
Sbjct: 424 SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH--LANALMNMYRRCGS 481

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L+EA+ VF+  + + VISW+S+I G+AQ  +   A +LF++++   L+ D    +S++  
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             +   +E GKQIH    +    LD ++ N++++MY++CG + +A  +F+ +  ++V++W
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSW 601

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           T +I G    G   +A+ LF +M  +   P DG  + ++LSAC+H+GLV E  + FS + 
Sbjct: 602 TAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSME 661

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           ++  + P IEHY C+V  LGRA R  EA+ LI  MP  P  A+W+TLL ACR+HG++ L 
Sbjct: 662 SEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALA 721

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
                  L+L+  NP  Y+++SN++A AG W++  ++R++   +G++K  GRSW+EVD  
Sbjct: 722 EHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNI 781

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F   D +HP T +I+  L  +   M EE G+    ++ LHD+ +  +E SL  HSE+
Sbjct: 782 IHEFIAADRSHPETAEIYAELKRLSVEM-EEAGYFPDTQHVLHDLGKAHQETSLCTHSER 840

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI   L++      PG  IR+FKNLR+CGDCH   K +SK++    + RD+ RFH F+ 
Sbjct: 841 LAIAYGLIK----TPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKN 896

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 897 GKCSCEDYW 905



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 263/498 (52%), Gaps = 12/498 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++R      L+ C++  LL    ++H  +V+ G   D+ L+N LI+MY KC  +  A  V
Sbjct: 25  TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F +M  R+V+SW +L+  + Q G  K    LF +M ++   PN+ T  + + A    + +
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           ENG +IH   +K+G++ +P V NS++ MY KCG +  A ++F  +  + ++++N M+  Y
Sbjct: 145 ENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
               Y  + L LF +M   G  PD+ T+ + L A  +   +  G +IH   +  G    +
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +  +  +LV   V+CG +  A++ F  I  + V+ +++LI   AQ  +  EA E + ++R
Sbjct: 265 R--VGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              + ++     S++   +    +E GK IH++ ++     D  + N+++ MY +CG + 
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP 382

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A ELF  MP +++++W  II GY +     EA+ L+++M  + V+P  V +L +LSAC+
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPS 485
           +S    +      ++ ++  ++  I+    + ++L     R G L EA+N+ E    +  
Sbjct: 443 NSSAYAD-----GKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497

Query: 486 IAIWQTLLSACRVHGDLE 503
           I+ W ++++    HG  E
Sbjct: 498 IS-WNSMIAGHAQHGSYE 514



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 203/383 (53%), Gaps = 7/383 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS +  L+ G  +H  + + G S D+ + N LI MYA+CG++  A  +F  M +R++
Sbjct: 337 LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDL 396

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +  +    + L+ QM S  VKP   T    + A    S+  +G  IH  
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHED 456

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SG + N  + N++++MY +CG + EA  +F+   A+ +I+WN+MIAG+   G  +  
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF++MQ     PD  TF S L  C +  ++  G QIHG +  SG    V   +  +L+
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN--LGNALI 574

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ-VDG 317
           + Y++CG L +AR VF  ++ + V+SW+++I G A +    +A+ELF Q++    +  DG
Sbjct: 575 NMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDG 634

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
              +S++       LV +G QI + + +   G+  ++ +   +V +  +     EA  L 
Sbjct: 635 STFTSILSACNHAGLVLEGYQIFS-SMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLI 693

Query: 376 NEMPV-KNVVTWTVIITGYGKHG 397
           N+MP   +   W  ++     HG
Sbjct: 694 NQMPFPPDAAVWETLLGACRIHG 716



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 5/183 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C     L+ G Q+HG + + G   D+ L N LI+MY +CG +  A  VF  + 
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ 594

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI-KASGVLSSVENGM 133
            R+V+SWTA++ G    G     + LF QM +   +P + +  T+I  A      V  G 
Sbjct: 595 HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGY 654

Query: 134 QIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYV 190
           QI    M+S +   P + +   ++ +  +  R  EA  + + MP       W  ++    
Sbjct: 655 QIFS-SMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 713

Query: 191 LAG 193
           + G
Sbjct: 714 IHG 716


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/678 (36%), Positives = 396/678 (58%), Gaps = 9/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +      G ++HG ++K G   D+ + N L+ MY +C  +  A  VFDKM+ER+V
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+ ++    +N      L L  +M    V+P+E  + + +      +++  G  +H  
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAY 220

Query: 139 CMKSGFEWNPVVGNS--IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            +++    +  V  +  ++DMY+KCG +  A ++F+ +  K++++W AMIAG + +   +
Sbjct: 221 VIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 280

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           +G  LF +MQE    P+E T  S +  CG  G++  G Q+H +++ +GF  SV   +A +
Sbjct: 281 EGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF--SVSLALATA 338

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y KC  +  AR +FD  + + V+ W++++  YAQ   + +A  LF Q+R   ++  
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++ + A    ++ GK +H+Y  K    +D  ++ ++VDMY KCG I+ A  LF 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           E   +++  W  IITG+  HG  +EA+ +F +M    V+P+ + ++ +L ACSH+GLV E
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++ F ++ +   + P+IEHY C+VD LGRAG LDEA  +I+SMP+KP+  +W  L++AC
Sbjct: 519 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H + +LG      LL ++ +N    V+MSNI+A A  W++   +RK  ++ G+KK  G
Sbjct: 579 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPG 638

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S +EV+  +H F  GD +HP   +I+++L EM +++ E  G+V      L +I EE KE
Sbjct: 639 HSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEA-GYVPDTSTVLLNIDEEEKE 697

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            +L  HSEKLA+   L+    +  P   IR+ KNLRVC DCH   K LSKI   V +VRD
Sbjct: 698 TALTYHSEKLAMAFGLI----STAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 753

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSCGDYW
Sbjct: 754 RNRFHHFREGYCSCGDYW 771



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 221/444 (49%), Gaps = 12/444 (2%)

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
           F   + +KA G +S  + G +IHG  +K G + +  VGN+++ MY +C  +  A  +FD 
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           M  + +++W+ MI         D  L L R+M      P E    S +       ++  G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             +H ++I +     +      +L+D Y KCG L  AR++F+ + QK+V+SW+++I G  
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           +   L E  +LF +++E ++  +   + S++        ++ GKQ+HAY  +    +  +
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           ++ ++VDMY KC  I  A  LF+    ++V+ WT +++ Y +     +A  LF +M    
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           V P  V  +++LS C+ +G ++  +   S + + +R++      + +VD   + G ++ A
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYI-DKERVEVDCILNTALVDMYAKCGDINAA 453

Query: 474 KNL-IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD--GDNPVNYVMMSNIH 530
             L IE+  +   I +W  +++   +HG    G E  +I   ++  G  P +   +  +H
Sbjct: 454 GRLFIEA--ISRDICMWNAIITGFAMHG---YGEEALDIFAEMERQGVKPNDITFIGLLH 508

Query: 531 A--DAGSWNECERL-RKLARSKGL 551
           A   AG   E ++L  K+  + GL
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGL 532


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/696 (36%), Positives = 400/696 (57%), Gaps = 15/696 (2%)

Query: 6   FSLVSERQRLADSLRC------CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
           F L+  R    DS  C      C+ +L  + G+++  + V+ G   +  + + +I    K
Sbjct: 118 FGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVK 177

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
            G++  A  VFD M  ++VV W +++ G++Q G       LF +M  S +KP+  T+++ 
Sbjct: 178 FGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSL 237

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           I+A G + +++ G  +HG  +  G   + +V  S +DMYSK G I  A  +F  MP ++L
Sbjct: 238 IQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNL 297

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+G V  G   +   LF ++       D  T  S L+ C    S+  G  +HG 
Sbjct: 298 VSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGC 357

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            I S   +    +++ ++VD Y KCG L +A  VF+ ++ ++VI+W+++++G AQ  +  
Sbjct: 358 AIRS---FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAE 414

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           +A+ LF Q++E  +  +     S++   A    +++G+ IH +  ++    D     ++V
Sbjct: 415 DALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALV 474

Query: 360 DMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           DMY KCG I+ A  +F+   + K+VV W  +ITGYG HG   +AVG++ KM+ + ++P+ 
Sbjct: 475 DMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQ 534

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
             +L++LSACSHS LVE+    F+ +  D  ++P  +HY+C+VD L RAGR +EA+ LIE
Sbjct: 535 TTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIE 594

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
            MP +P  A+ + LLS CR H ++ LG +  + LL LD  NP  Y+M+SNI+A+A  W++
Sbjct: 595 KMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDK 654

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
            + +R L R++GLKK  G S VE    +H F+ GD++HP  E+I+  L E  +   E  G
Sbjct: 655 VDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFL-ESLRSAVETSG 713

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +V      L D+ EE K   L  HSE+LAI   L    L    G +IR+ KNLRVCGDCH
Sbjct: 714 YVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGL----LTTPAGSLIRITKNLRVCGDCH 769

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              K +SKI+K   +VRDA RFH F  G CSCGDYW
Sbjct: 770 TVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 254/482 (52%), Gaps = 6/482 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR  SKNL+  +    H  ++    S D  +   L+  Y+    +  A  VFD+  +   
Sbjct: 38  LRESSKNLI--WVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKG 95

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +   A++CG+LQ+G  +  L LF  M S +++ +  + +  +KA       E GM+I   
Sbjct: 96  LLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISS 155

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ G E N  VG+S+I    K G+I EA R+FD MP K ++ WN++I GYV AG  D  
Sbjct: 156 AVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVA 215

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF +M   G  P   T TS ++ACG +G++  G  +HG+++  G    +  ++  S V
Sbjct: 216 FQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDI--LVLTSFV 273

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G +  AR VF  +  ++++SW+++I G  +   + E+ +LF +L   S   D  
Sbjct: 274 DMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLT 333

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            + S++   +  A +  GK +H  A +     +  +S +IVD+Y KCG + +AT +FN M
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAIRSFES-NLILSTAIVDLYSKCGSLKQATFVFNRM 392

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +NV+TWT ++ G  ++G A++A+ LF +M  + +  + V +++++ +C+H G ++  +
Sbjct: 393 KDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
                L         I + + +VD   + G+++ A+ +     +   + +W ++++   +
Sbjct: 453 SIHGHLFR-LGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGM 511

Query: 499 HG 500
           HG
Sbjct: 512 HG 513


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/664 (36%), Positives = 398/664 (59%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++HG L+K+G+  D    N L+DMYAK G +  A +VFD++ + ++VSW A++ G + 
Sbjct: 130 GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL 189

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +      L L  +M  S + PN FTLS+ +KA   ++  E G Q+H   +K     +  +
Sbjct: 190 HEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFL 249

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G  +IDMYSKC  +++A  +F +MP + +I WNA+I+G+      ++   LF  M   G 
Sbjct: 250 GVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGI 309

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++ T ++ LK+  +L +     QIH   + SGF +     +  SL+D Y KCG + +A
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFD--NYVVNSLIDTYGKCGHVEDA 367

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            RVF+      ++ ++SL+  YAQ+    EA+ L+ ++++R ++ D FV SS++   A  
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           +  EQGKQ+H +  K     D    NS+V+MY KCG I++A+  F+ +PV+ +V+W+ +I
Sbjct: 428 SAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMI 487

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G  +HG  KEA+ LF++ML   V P+ +  ++VL AC+H+GLV E++ YF+ +     +
Sbjct: 488 GGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGI 547

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C++D LGRAG+L+ A  L+  MP + +  +W  LL A R+H +++LG +  E
Sbjct: 548 EPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAE 607

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           +LL L+ +    +V+++NI+A  G W++  R+R+L +   +KK  G SW+EV  +++ F 
Sbjct: 608 MLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFI 667

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +H  + +I+  L E+   +K+  G+V  V+  LHD++   KE+ L  HSEKLA+  
Sbjct: 668 VGDRSHSRSTEIYAKLDELSDLLKKA-GYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAF 726

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+       PG  IRV KNLR+C DCH  +K +SKI+    +VRD  RFH F  G CSC
Sbjct: 727 GLIA----TPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSC 782

Query: 691 GDYW 694
           G+YW
Sbjct: 783 GEYW 786



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/512 (30%), Positives = 270/512 (52%), Gaps = 8/512 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G Q+HG +V  GF  D  + N L+ +YAKCG    A ++FD + +R+V
Sbjct: 17  LKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSV 76

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL   ++ +      +SLF  M  S ++PNEF+LS+ I     L     G +IHG 
Sbjct: 77  VSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGY 136

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G++ +    N+++DMY+K G + +A+ +FD +    +++WNA+IAG VL  Y  + 
Sbjct: 137 LIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRA 196

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L R+M + G  P+ FT +S LKAC  +     G Q+H  LI         + +   L+
Sbjct: 197 LELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK--MDMGSDSFLGVGLI 254

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  + +AR VF L+ ++ +I+W+++I G++Q E   EA  LF  +    +  +  
Sbjct: 255 DMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQT 314

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            LS+++   A        +QIHA + K     D  V NS++D Y KCG +++AT +F E 
Sbjct: 315 TLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEES 374

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P+ ++V +T ++T Y + G  +EA+ L+ +M    ++PD     ++L+AC+     E+ +
Sbjct: 375 PIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGK 434

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +    +     M       S +V+   + G +++A      +PV+  I  W  ++     
Sbjct: 435 QVHVHILKFGFMSDIFAGNS-LVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQ 492

Query: 499 HGDLELGREVGEILLR-LDGDNPVNYVMMSNI 529
           HG    G+E  ++  + L    P N++ + ++
Sbjct: 493 HG---YGKEALQLFKQMLKVGVPPNHITLVSV 521



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 210/380 (55%), Gaps = 8/380 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L+ C+   L + G QLH +L+KM    D  L   LIDMY+KC  M+ A  VF  M 
Sbjct: 215 LSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMP 274

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER++++W A++ G  QN   +   SLF  M +  +  N+ TLST +K+   L +     Q
Sbjct: 275 ERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQ 334

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +KSGFE++  V NS+ID Y KCG + +A R+F+  P   L+ + +++  Y   G 
Sbjct: 335 IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQ 394

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L L+ +MQ+ G  PD F  +S L AC SL +   G Q+H  ++  GF   +  + A
Sbjct: 395 GEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGF---MSDIFA 451

Query: 255 G-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           G SLV+ Y KCG + +A   F  I  + ++SWS++I G AQ     EA++LF+Q+ +  +
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV 511

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
             +   L S++       LV + K  +  + K+  G++    +   ++D+  + G ++ A
Sbjct: 512 PPNHITLVSVLCACNHAGLVAEAKH-YFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAA 570

Query: 372 TELFNEMPVK-NVVTWTVII 390
            EL N+MP + N + W  ++
Sbjct: 571 MELVNKMPFQANALVWGALL 590



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 17/431 (3%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           +K NEF   + +KA  V   +  G Q+HG+ + +GF+ +  V NS++ +Y+KCG   +A 
Sbjct: 6   IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD +P +S+++WNA+ + YV +    + + LF  M   G  P+EF+ +S +  C  L 
Sbjct: 66  SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
               G +IHG+LI  G  Y      A +LVD Y K G L +A  VFD I +  ++SW+++
Sbjct: 126 DSVQGRKIHGYLIKLG--YDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I G    E    A+EL R++ +  +  + F LSS +   A  AL E G+Q+H+   K+  
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
           G D+ +   ++DMY KC  +D+A  +F  MP ++++ W  +I+G+ ++   +EA  LF  
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL---- 464
           M       +G+ +     +     +      Y  R  +   +K   E  + +V+SL    
Sbjct: 304 M-----HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD--GDNPVN 522
           G+ G +++A  + E  P+   + ++ +L++A    G    G E   + L +   G  P +
Sbjct: 359 GKCGHVEDATRVFEESPI-VDLVLFTSLVTAYAQDGQ---GEEALRLYLEMQDRGIKPDS 414

Query: 523 YVMMSNIHADA 533
           +V  S ++A A
Sbjct: 415 FVCSSLLNACA 425


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/690 (36%), Positives = 408/690 (59%), Gaps = 9/690 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           +  +V +   ++  LR C     ++ G  +HG + K+G   D+++NN L+ MY K   + 
Sbjct: 268 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
               +FDKM+ R+ VSW  ++CG+ Q G  +  + LF +M  +  KP+  T+++ ++A G
Sbjct: 328 DGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACG 386

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L  +E G  +H   + SG+E +    N +I+MY+KCG +  +  +F  M  K  ++WN+
Sbjct: 387 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 446

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI  Y+  G  D+ + LF+ M+   + PD  T+   L     LG +  G ++H  L   G
Sbjct: 447 MINVYIQNGSFDEAMKLFKMMKTDVK-PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMG 505

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F  ++  V++ +LVD Y KCG + ++ +VF+ ++ + +I+W+++I      E+    + +
Sbjct: 506 FNSNI--VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 563

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
             ++R   +  D   + S++ V +  A   QGK+IH    K+    D  V N +++MY K
Sbjct: 564 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 623

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +  + ++F  M  K+VVTWT +I+  G +G  K+AV  F +M    + PD VA++A+
Sbjct: 624 CGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAI 683

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           + ACSHSGLVEE   YF R+  D +++PRIEHY+C+VD L R+  LD+A++ I SMP+KP
Sbjct: 684 IFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 743

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
             +IW  LLSACR+ GD E+ + V E ++ L+ D+   YV++SN++A  G W++   +RK
Sbjct: 744 DSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRK 803

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
             +++GLKK  G SW+E+  +++ F  G       E+++++L  +   M +E G++  ++
Sbjct: 804 SIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKE-GYIANLQ 862

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + LHDI E+ K + L  HSE+LAI   L    LN +PG  ++V KNLRVC DCH   K +
Sbjct: 863 FVLHDIDEDEKRDILCGHSERLAIAFGL----LNTKPGTPLQVMKNLRVCEDCHTVTKYI 918

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SKI +   +VRDA RFH F+ G CSCGDYW
Sbjct: 919 SKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 264/509 (51%), Gaps = 21/509 (4%)

Query: 5   SFSLVSERQRL---------ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           + SL SE QR+            +  C+  L  +    +H  ++ MGF  DL + N LID
Sbjct: 158 ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALID 217

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY +  +++ A  VF++M  R+VVSW +L+ G+  NG     L ++ +  +  V P+ +T
Sbjct: 218 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYT 277

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +S+ ++A G L SVE G  IHG+  K G + + +V N ++ MY K   + +  R+FD M 
Sbjct: 278 MSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMV 337

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            +  ++WN MI GY   G  ++ + LF +M    + PD  T TS L+ACG LG +  G  
Sbjct: 338 LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDLEFGKY 396

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H ++ITSG  Y   T  +  L++ Y KCG L+ ++ VF  ++ K  +SW+S+I  Y Q 
Sbjct: 397 VHDYMITSG--YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQN 454

Query: 296 ENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
            +  EAM+LF+ ++   +   V   +L SM     D  L   GK++H   AK+    +  
Sbjct: 455 GSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXL---GKELHCDLAKMGFNSNIV 511

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           VSN++VDMY KCG + ++ ++F  M  ++++TW  II            + +  +M  + 
Sbjct: 512 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEG 571

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDE 472
           V PD    L++L  CS      + +E     C  K  ++  +   + +++   + G L  
Sbjct: 572 VTPDMATMLSILPVCSLLAAKRQGKEIHG--CIFKLGLESDVPVGNVLIEMYSKCGSLRN 629

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           +  + + M  K  +  W  L+SAC ++G+
Sbjct: 630 SFQVFKLMKTK-DVVTWTALISACGMYGE 657



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 259/499 (51%), Gaps = 14/499 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD-KMLERNVVSWTALMCGFLQN 91
           +LH  ++ +G    ++ +  LI  YA   +   + +VF       NV  W +++     N
Sbjct: 93  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     LSL+ +     ++P+ +T  + I A   L   E    IH   +  GF  +  +G
Sbjct: 153 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++IDMY +   +++A ++F+ MP + +++WN++I+GY   GY ++ L ++ + +  G +
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD +T +S L+ACG LGSV  G  IHG +   G    V  ++   L+  Y K   L++ R
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDV--IVNNGLLSMYCKFNGLIDGR 330

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           R+FD +  +  +SW+++I GY+Q     E+++LF ++  +  + D   ++S++       
Sbjct: 331 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLG 389

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E GK +H Y        DT+ SN +++MY KCG +  + E+F+ M  K+ V+W  +I 
Sbjct: 390 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 449

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM- 450
            Y ++G   EA+ LF KM+  DV+PD V Y+ +LS  +  G +   +E     C+  +M 
Sbjct: 450 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH---CDLAKMG 505

Query: 451 -KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG-REV 508
               I   + +VD   + G + ++  + E+M  +  I  W T++++C    D  LG R +
Sbjct: 506 FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMI 564

Query: 509 GEILLRLDGDNPVNYVMMS 527
               +R +G  P    M+S
Sbjct: 565 SR--MRTEGVTPDMATMLS 581



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 38/361 (10%)

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E   +  F+S  +A  S  +     ++H  +IT G  +SV  + +  L+  Y        
Sbjct: 68  ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSV--IFSAKLIAKYAHFRDPTS 125

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +  VF L     +V  W+S+I         +EA+ L+ + +   LQ D +   S++   A
Sbjct: 126 SFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA 185

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                E  K IH     +  G D  + N+++DMY +   +D+A ++F EMP+++VV+W  
Sbjct: 186 GLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 245

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE------------ 436
           +I+GY  +G   EA+ ++ +     V PD     +VL AC   G VEE            
Sbjct: 246 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG 305

Query: 437 -------SQEYFSRLCN-----------DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
                  +    S  C            DK +      ++ ++    + G  +E+  L  
Sbjct: 306 IKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFM 365

Query: 479 SM--PVKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDNPVNYVMMSNIHADAG 534
            M    KP +    ++L AC   GDLE G+ V + ++    + D   + +++ N++A  G
Sbjct: 366 EMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMYAKCG 424

Query: 535 S 535
           +
Sbjct: 425 N 425


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/678 (37%), Positives = 394/678 (58%), Gaps = 12/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    +  G ++H  +++ GF  D+ + N LI MY KCG+++ A  +FDKM +R+ 
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR 264

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +NG     L LF  M   SV P+  T++T   A  +L +   G  +HG 
Sbjct: 265 ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGY 324

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  +  + NS+I MYS  GR+ EA  +F  M +K +++W AMIA  V      K 
Sbjct: 325 VVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKA 384

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  ++ M+  G +PDE T  S L AC  +G +  G ++H   I +G    V  +++ SL+
Sbjct: 385 VETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV--IVSNSLI 442

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC C+  A  VF  I  K+V+SW+SLILG        EA+  FRQ++E S++ +  
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSV 501

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    + +GK+IHA+A +   G D  + N+I+DMY++CG    A   FN  
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ 561

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V  W +++TGY + G AK AV LF KML  ++ PD + ++++L ACS SG+V E  
Sbjct: 562 K-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGL 620

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF+ + N   + P ++HY+C+VD LGRAG+LD+A + I+ MP++P  AIW  LL+ACR+
Sbjct: 621 EYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRI 680

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG    + +   D  +   Y+++ N++A  G+W++  ++R L R +GL    G S
Sbjct: 681 HRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCS 740

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  ++H F  GD++H  +++I+ VL     +MKE  GF   +K +     E S+ + 
Sbjct: 741 WVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN-GF-GNLKSSFTSEIESSRADI 798

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+ AI   L+    N  PG  I V KNL +C  CH  +K +S I++    VRD  
Sbjct: 799 FCGHSERQAIAFGLI----NTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVE 854

Query: 679 RFHRFEGGVCSCGD--YW 694
            +H F+ GVCSCGD  YW
Sbjct: 855 EYHHFKDGVCSCGDEGYW 872



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 253/500 (50%), Gaps = 10/500 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C      D G +++  +        + L N L+ M+ + G +  A  VF KM ER+V
Sbjct: 104 LRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDV 163

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  L+ G+ + G     L+L+ +M  + ++PN +T  + +K    +S +  G +IH  
Sbjct: 164 FSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAH 223

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  VGN++I MY KCG I+ A  +FD MP +  I+WNAMI+GY   G   +G
Sbjct: 224 VIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG 283

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M+E    PD  T T+   AC  L +   G  +HG+++ S F   +   +  SL+
Sbjct: 284 LELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS--MNNSLI 341

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y   G L EA  VF  +E K V+SW+++I      +   +A+E ++ +    +  D  
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEI 401

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    ++ G ++H  A K        VSNS++DMY KC  +D A E+F  +
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             KNVV+WT +I G   +  + EA+  FR+M  + ++P+ V  ++VLSAC+  G +   +
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGK 520

Query: 439 EYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           E  +      R     + +  + I+D   R GR   A N   S   K  +  W  LL+  
Sbjct: 521 EIHAHAL---RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGY 575

Query: 497 RVHGDLELGREVGEILLRLD 516
              G  +L  E+ + +L L+
Sbjct: 576 AQQGQAKLAVELFDKMLELE 595



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 2/221 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G++LH   +K G    ++++N LIDMY+KC  ++ A  VF  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSWT+L+ G   N  +   L  F QM   S+KPN  TL + + A   + ++  G +
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKE 521

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +++G  ++  + N+I+DMY +CGR   A   F+    K +  WN ++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQ 580

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           +   + LF KM E    PDE TF S L AC   G V  G +
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE 621


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/678 (37%), Positives = 394/678 (58%), Gaps = 12/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    +  G ++H  +++ GF  D+ + N LI MY KCG+++ A  +FDKM +R+ 
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR 264

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +NG     L LF  M   SV P+  T++T   A  +L +   G  +HG 
Sbjct: 265 ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGY 324

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  +  + NS+I MYS  GR+ EA  +F  M +K +++W AMIA  V      K 
Sbjct: 325 VVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKA 384

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  ++ M+  G +PDE T  S L AC  +G +  G ++H   I +G    V  +++ SL+
Sbjct: 385 VETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHV--IVSNSLI 442

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC C+  A  VF  I  K+V+SW+SLILG        EA+  FRQ++E S++ +  
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSV 501

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    + +GK+IHA+A +   G D  + N+I+DMY++CG    A   FN  
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ 561

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V  W +++TGY + G AK AV LF KML  ++ PD + ++++L ACS SG+V E  
Sbjct: 562 K-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGL 620

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF+ + N   + P ++HY+C+VD LGRAG+LD+A + I+ MP++P  AIW  LL+ACR+
Sbjct: 621 EYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRI 680

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG    + +   D  +   Y+++ N++A  G+W++  ++R L R +GL    G S
Sbjct: 681 HRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCS 740

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  ++H F  GD++H  +++I+ VL     +MKE  GF   +K +     E S+ + 
Sbjct: 741 WVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN-GF-GNLKSSFTSEIESSRADI 798

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+ AI   L+    N  PG  I V KNL +C  CH  +K +S I++    VRD  
Sbjct: 799 FCGHSERQAIAFGLI----NTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVE 854

Query: 679 RFHRFEGGVCSCGD--YW 694
            +H F+ GVCSCGD  YW
Sbjct: 855 EYHHFKDGVCSCGDEGYW 872



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 253/500 (50%), Gaps = 10/500 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C      D G +++  +        + L N L+ M+ + G +  A  VF KM ER+V
Sbjct: 104 LRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDV 163

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  L+ G+ + G     L+L+ +M  + ++PN +T  + +K    +S +  G +IH  
Sbjct: 164 FSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAH 223

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  VGN++I MY KCG I+ A  +FD MP +  I+WNAMI+GY   G   +G
Sbjct: 224 VIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEG 283

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M+E    PD  T T+   AC  L +   G  +HG+++ S F   +   +  SL+
Sbjct: 284 LELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS--MNNSLI 341

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y   G L EA  VF  +E K V+SW+++I      +   +A+E ++ +    +  D  
Sbjct: 342 QMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEI 401

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    ++ G ++H  A K        VSNS++DMY KC  +D A E+F  +
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             KNVV+WT +I G   +  + EA+  FR+M  + ++P+ V  ++VLSAC+  G +   +
Sbjct: 462 SGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGK 520

Query: 439 EYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           E  +      R     + +  + I+D   R GR   A N   S   K  +  W  LL+  
Sbjct: 521 EIHAHAL---RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGY 575

Query: 497 RVHGDLELGREVGEILLRLD 516
              G  +L  E+ + +L L+
Sbjct: 576 AQQGQAKLAVELFDKMLELE 595



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 2/221 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G++LH   +K G    ++++N LIDMY+KC  ++ A  VF  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSWT+L+ G   N  +   L  F QM   S+KPN  TL + + A   + ++  G +
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKE 521

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +++G  ++  + N+I+DMY +CGR   A   F+    K +  WN ++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQ 580

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           +   + LF KM E    PDE TF S L AC   G V  G +
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLE 621


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/678 (37%), Positives = 395/678 (58%), Gaps = 43/678 (6%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSSSV 109
           N ++ +Y+K G ++    +F+ M  R+ VSW   + G+   G+    + ++   +  +++
Sbjct: 75  NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             N  T ST +        V+ G QI+G  +K GF  +  VG+ ++DMY+K G I +A R
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194

Query: 170 MFDVMPAKSL-------------------------------ITWNAMIAGYVLAGYSDKG 198
            FD MP +++                               I+W  MI G +  G   + 
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +FR+M+  G   D+FTF S L ACGSL ++G G QIH ++I +    +V   +  +LV
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV--FVGSALV 312

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A  VF  + QK+VISW+++++GY Q     EA+++F +++   ++ D F
Sbjct: 313 DMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDF 372

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFN 376
            L S++   A+ A +E+G Q H  A  + SGL +  +VSN+++ +Y KCG  + +  LF 
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCRA--LVSGLISFITVSNALITLYGKCGSTENSHRLFT 430

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM +++ V+WT ++ GY + G A E +GLF +ML   ++PDGV ++ VLSACS +GLVE+
Sbjct: 431 EMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEK 490

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +YF  +  +  + P ++H +CI+D LGRAGRL+EA+N I +MP  P +  W TLLS+C
Sbjct: 491 GLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSC 550

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RVHGD+E+G+   + L+ L+  NP +YV++S+++A  G W++  +LR+  R K ++K  G
Sbjct: 551 RVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPG 610

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW++   ++H F   D + P   +I+  L ++  +M EE G+V  +   LHD++E  K 
Sbjct: 611 YSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEE-GYVPDMSSVLHDVEESEKI 669

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + L  HSEKLAI   L+       PG  IRV KNLRVCGDCH   K +SKI +   +VRD
Sbjct: 670 KMLNHHSEKLAIAFGLIF----VPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRD 725

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH F+ G CSCGD+W
Sbjct: 726 AVRFHLFKDGTCSCGDFW 743



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 237/485 (48%), Gaps = 48/485 (9%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR++FS +         L  CSK   +D G Q++G ++K GF  D+ + + L+DMY K 
Sbjct: 136 LNRITFSTM---------LILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKL 186

Query: 61  GEMNGACAVFDKMLERNVV-------------------------------SWTALMCGFL 89
           G +  A   FD+M ERNVV                               SWT ++ G +
Sbjct: 187 GLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLM 246

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG  +  L +F +M  +    ++FT  + + A G L ++  G QIH   +++  + N  
Sbjct: 247 QNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVF 306

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG++++DMYSKC  I  A  +F  MP K++I+W AM+ GY   G+S++ + +F +MQ +G
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNG 366

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+FT  S + +C +L S+  G Q H   + SG    +   ++ +L+  Y KCG    
Sbjct: 367 VEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFI--TVSNALITLYGKCGSTEN 424

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + R+F  +  +  +SW++L+ GYAQ     E + LF ++    L+ DG     ++   + 
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTW 386
             LVE+G Q      K   G+   V +   I+D+  + G ++EA    N MP   +VV W
Sbjct: 485 AGLVEKGLQYFESMIK-EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +++    HG     +G +    L  +EP   A   +LS+   S    +      R   
Sbjct: 544 ATLLSSCRVHG--DMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMR 601

Query: 447 DKRMK 451
           DKR++
Sbjct: 602 DKRVR 606



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 82/443 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           + S LK C    +     ++H  ++ +      +T ++ +L+  Y K G L  A  VFD 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKT--IKQPETFLSNNLITAYYKLGNLAYAHHVFDH 65

Query: 277 IEQKSVISWSSL-------------------------------ILGYAQEENLAEAMELF 305
           I Q ++ SW+++                               I GYA   + ++A+ ++
Sbjct: 66  IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125

Query: 306 R-QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           +  L++ ++ ++    S+M+ + + F  V+ G+QI+    K   G D  V + +VDMY K
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 365 CGLIDEATELFNEMPVKNVV-------------------------------TWTVIITGY 393
            GLI +A   F+EMP +NVV                               +WT++ITG 
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            ++GL +EA+ +FR+M L     D   + +VL+AC     + E ++  + +      K  
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH-KDN 304

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +   S +VD   +   +  A+ + + MP K  I+ W  +L     +G      E  +I  
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVIS-WTAMLVG---YGQNGFSEEAVKIFF 360

Query: 514 RL--DGDNPVNYVMMSNIH--ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
            +  +G  P ++ + S I   A+  S  E  +    A   GL      S++ V   +   
Sbjct: 361 EMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI-----SFITVSNALITL 415

Query: 570 YGGDDTHPLTEKIHQVLMEMEKR 592
           YG   +   TE  H++  EM  R
Sbjct: 416 YGKCGS---TENSHRLFTEMNIR 435


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/668 (36%), Positives = 380/668 (56%), Gaps = 8/668 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L+ G ++HG  ++     D+++   L+ MYAKCGE   A  +F  +  R++V+W+A++  
Sbjct: 345  LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             +Q G  +  LSLF +M +  +KPN  TL + + A   LS ++ G  IH   +K+  + +
Sbjct: 405  LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 148  PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
               G +++ MY+KCG    A   F+ M ++ ++TWN++I GY   G     + +F K++ 
Sbjct: 465  LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 208  HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
                PD  T    + AC  L  +  GT IHG ++  GF       +  +L+D Y KCG L
Sbjct: 525  SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH--VKNALIDMYAKCGSL 582

Query: 268  VEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
              A  +F+  +  K  ++W+ +I  Y Q  +  EA+  F Q+R  +   +     S++  
Sbjct: 583  PSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA 642

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A  A   +G   HA   ++    +T V NS++DMY KCG +  + +LFNEM  K+ V+W
Sbjct: 643  AAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSW 702

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
              +++GY  HG    A+ LF  M    V+ D V++++VLSAC H GLVEE ++ F  + +
Sbjct: 703  NAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSD 762

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
               +KP +EHY+C+VD LGRAG  DE    I+ MPV+P   +W  LL +CR+H +++LG 
Sbjct: 763  KYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGE 822

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
               + L++L+  NP ++V++S+I+A +G W +  + R      GLKK  G SWVE+  ++
Sbjct: 823  VALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKV 882

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F  GD +HP  E +H +   + ++M E++G+V      L +++EE KE  L  HSE+L
Sbjct: 883  HAFRVGDKSHPQLESMHLLWNTLLEKM-EKIGYVPDRSCVLQNVEEEDKEMFLYSHSERL 941

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            AI  AL    LN  PG  I++ KNLRVC DCH   K +SKI     +VRDATRFH FE G
Sbjct: 942  AITFAL----LNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997

Query: 687  VCSCGDYW 694
            +CSC DYW
Sbjct: 998  ICSCNDYW 1005



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 252/471 (53%), Gaps = 13/471 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG + +  FS    ++N LID+Y+KCG+++ A  VFD+M++++ VSW  +M G+  NG 
Sbjct: 252 IHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF +M   +V+ N+ +  +   A+     +E G +IHG  ++   + + +V   
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++ MY+KCG   +A ++F  +  + L+ W+A+IA  V  GY ++ L LF++MQ     P+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  S L AC  L  +  G  IH F + +     + T  A  LV  Y KCG    A   
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA--LVSMYAKCGFFTAALTT 487

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL- 332
           F+ +  + +++W+SLI GYAQ  +   A+++F +LR  ++  D     +M+GV    AL 
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDA---GTMVGVVPACALL 544

Query: 333 --VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVI 389
             ++QG  IH    K+    D  V N+++DMY KCG +  A  LFN+    K+ VTW VI
Sbjct: 545 NDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVI 604

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I  Y ++G AKEA+  F +M L++  P+ V +++VL A ++     E   + + +     
Sbjct: 605 IAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGF 664

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +   +   S ++D   + G+L  ++ L   M  K +++ W  +LS   VHG
Sbjct: 665 LSNTLVGNS-LIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHG 713



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 213/411 (51%), Gaps = 4/411 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+  L L  GV  HG + + G   D+ +   L+DMY+K G++  A  VFDKM +R+V
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDV 195

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G  Q+ +    +  F  M    V+P+  +L         LS++E    IHG 
Sbjct: 196 VAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGY 255

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +  F  +  V N +ID+YSKCG ++ A R+FD M  +  ++W  M+AGY   G   + 
Sbjct: 256 VFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEV 313

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF KM+      ++ +  S   A      +  G +IHG  +       +  ++A  L+
Sbjct: 314 LELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI--LVATPLM 371

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG   +A+++F  ++ + +++WS++I    Q     EA+ LF++++ + ++ +  
Sbjct: 372 VMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   AD +L++ GK IH +  K     D S   ++V MY KCG    A   FN M
Sbjct: 432 TLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
             +++VTW  +I GY + G    A+ +F K+ L  + PD    + V+ AC+
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  L   L  C+   LL  G  +H   VK     DL     L+ MYAKCG    A   F+
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFN 489

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +M  R++V+W +L+ G+ Q G+    + +F ++  S++ P+  T+   + A  +L+ ++ 
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYV 190
           G  IHG+ +K GFE +  V N++IDMY+KCG +  A  +F+     K  +TWN +IA Y+
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G++ + +  F +M+     P+  TF S L A   L +   G   H  +I  GF  +  
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN-- 667

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           T++  SL+D Y KCG L  + ++F+ ++ K  +SW++++ GYA   +   A+ LF  ++E
Sbjct: 668 TLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
             +Q+D     S++       LVE+G++I H+ + K     D      +VD+  + GL D
Sbjct: 728 SQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787

Query: 370 EATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           E       MPV+ +   W  ++     H   K  +G      L  +EP   A+  VLS+
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK--LGEVALDHLVKLEPRNPAHFVVLSS 844



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 241/495 (48%), Gaps = 20/495 (4%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q+H  ++  GF     + + LI++Y+   + + A +VFD     + + W +++  + ++
Sbjct: 49  LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 107

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                 L ++  M    ++P+++T +  +KA     +++ G+  HG   + G E +  +G
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
             ++DMYSK G +  A  +FD MP + ++ WNAMIAG   +    + +  FR MQ  G  
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P   +  +       L ++     IHG++    F     + ++  L+D Y KCG +  AR
Sbjct: 228 PSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF----SSAVSNGLIDLYSKCGDVDVAR 283

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           RVFD +  +  +SW +++ GYA      E +ELF +++  +++++     S     A+  
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E+GK+IH  A +     D  V+  ++ MY KCG  ++A +LF  +  +++V W+ II 
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE--ESQEYFSRLCNDKR 449
              + G  +EA+ LF++M    ++P+ V  +++L AC+   L++  +S   F+   +   
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD--- 460

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           M   +   + +V    + G    A      M  +  I  W +L     ++G  ++G    
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSL-----INGYAQIGDPYN 514

Query: 510 EI----LLRLDGDNP 520
            I     LRL   NP
Sbjct: 515 AIDMFYKLRLSAINP 529


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/680 (35%), Positives = 389/680 (57%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+ C+    L  G  LH   ++ G   D  L   L+DMY+KCG +  A  VF K+ 
Sbjct: 54  LSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR 113

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             +VV+W+A++ G  Q G+ +    LF  M     +PN+FTLS+ +  +  +  +  G  
Sbjct: 114 NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQS 173

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG   K GFE + +V N +I MY K   + +  ++F+ M    L++WNA+++G+  +  
Sbjct: 174 IHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT 233

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             +G  +F +M   G  P+ FTF S L++C SL     G Q+H  +I +         + 
Sbjct: 234 CGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNS--SDDDDFVG 291

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LVD Y K  CL +A   FD +  + + SW+ +I GYAQ +   +A++ FRQ++   ++
Sbjct: 292 TALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIK 351

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + + L+S +   +  A +E G+Q+HA A K     D  V +++VD+Y KCG ++ A  +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +  +++V+W  II+GY +HG  ++A+  FR ML + + PD   ++ VLSACS  GLV
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLV 471

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE ++ F  +     + P IEHY+C+VD LGRAG+ +E K  IE M + P   IW+T+L 
Sbjct: 472 EEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLG 531

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC++HG+++ G +  + L  ++     +Y+++SNI A  G W++   +R L  S+G+KK 
Sbjct: 532 ACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKE 591

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SWVEVD ++H F   D +HP   +I+  L ++ + +   +G+V   +  LH++  + 
Sbjct: 592 PGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLM-SIGYVPKTEVVLHNVSNKE 650

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K E L  HSE+LA+  AL    L+    K IR+FKNLR+C DCH+F+K +S I     VV
Sbjct: 651 KMEHLYYHSERLALSFAL----LSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVV 706

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F+ G CSC D W
Sbjct: 707 RDIRRFHHFKRGTCSCQDRW 726



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 234/451 (51%), Gaps = 16/451 (3%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F  M E+N VSW AL+ G+ Q G+ K  L LFC+M     K ++FTLST +K      S
Sbjct: 7   LFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGS 66

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +  G  +H + ++SG E +  +G S++DMYSKCG + +A ++F  +    ++ W+AMI G
Sbjct: 67  LREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITG 126

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
               G+  +   LF  M+  G  P++FT +S +    ++G +  G  IHG +   GF   
Sbjct: 127 LDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF--E 184

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
              +++  L+  Y+K  C+ +  +VF+ +    ++SW++L+ G+   +       +F Q+
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
                + + F   S++   +     E GKQ+HA+  K  S  D  V  ++VDMY K   +
Sbjct: 245 LLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCL 304

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           ++A   F+ +  +++ +WTVII+GY +   A++AV  FR+M  + ++P+     + LS C
Sbjct: 305 EDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGC 364

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHY------SCIVDSLGRAGRLDEAKNLIESMPV 482
           SH   +E  ++  +       +  +  H+      S +VD  G+ G ++ A+ + + + +
Sbjct: 365 SHMATLENGRQLHA-------VAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-I 416

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILL 513
              I  W T++S    HG  E   E   ++L
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMML 447



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 35/381 (9%)

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A R+F  MP K+ ++WNA++ GY   G   K L LF KM+E      +FT ++ LK C +
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
            GS+  G  +H   + SG    +   +  SLVD Y KCG + +A +VF  I    V++WS
Sbjct: 64  TGSLREGKVLHALALRSG--CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWS 121

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I G  Q+ +  EA ELF  +R +  + + F LSS++    +   +  G+ IH    K 
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY 181

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
               D  VSN ++ MY+K   +++  ++F  M   ++V+W  +++G+           +F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 407 RKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEESQE------------YFSR 443
            +MLL+  +P+   +++VL +CS           H+ +++ S +            Y   
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 444 LC-------NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLL 493
            C        D+ +   I  ++ I+    +  + ++A      M    +KP+     + L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 494 SACRVHGDLELGREVGEILLR 514
           S C     LE GR++  + ++
Sbjct: 362 SGCSHMATLENGRQLHAVAVK 382


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/680 (37%), Positives = 375/680 (55%), Gaps = 35/680 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    L  G Q H   +K G + D+++   L+D+Y KC ++  A   F    
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---- 410

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
                    L  G L N N      +F QM    + PN+FT  + +K    L + + G Q
Sbjct: 411 ---------LCYGQLDNLNKS--FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 459

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+GF++N  V + +IDMY+K G+++ A ++F  +    +++W AMIAGY     
Sbjct: 460 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 519

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF++MQ+ G   D   F S + AC  + ++  G QIH     SG  YS    I 
Sbjct: 520 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG--YSDDLSIG 577

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  Y +CG + EA   FD I  K  +SW+SL+ G+AQ     EA+ +F Q+ +  L+
Sbjct: 578 NALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLE 637

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
           ++ F   S +   A+ A V  GKQIH    K     +T VSN+++ +Y KCG ID+    
Sbjct: 638 INSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD---- 693

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
                    ++W  +ITGY +HG   EA+ LF  M   DV P+ V ++ VLSACSH GLV
Sbjct: 694 ---------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLV 744

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E   YF  +     + P+ EHY+C+VD LGR+G L  AK  +E MP++P   +W+TLLS
Sbjct: 745 DEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLS 804

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC VH ++++G      LL L+  +   YV++SN++A +G W+  +R R++ + +G+KK 
Sbjct: 805 ACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKE 864

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            GRSWVEVD  +H F+ GD  HP  + I++ L  ++ R  E  G+V      L D +   
Sbjct: 865 PGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAEN-GYVPRCNSLLSDAEIRQ 923

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ +  +HSE+LAI   L    L+      + VFKNLRVC DCH +IK +SKI   V +V
Sbjct: 924 KDPTEIIHSERLAIAFGL----LSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIV 979

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD+ RFH F+ G CSC DYW
Sbjct: 980 RDSYRFHHFKVGSCSCKDYW 999



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 242/486 (49%), Gaps = 34/486 (6%)

Query: 19  LRCCSKNLL-LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           LR CS N +   +  Q+H   +  GF     + N LID+Y K G ++ A  VF+ +  R+
Sbjct: 170 LRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARD 229

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSW A++ G  QNG  +  + LFCQ+  S+    EF               E G Q+HG
Sbjct: 230 SVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEF--------------FEFGKQLHG 275

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K GF     V N+++ +YS+ G ++ A ++F  M  +  +++N++I+G    GY ++
Sbjct: 276 LVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINR 335

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF+KM    + PD  T  S L AC S+G++  G Q H + I +G    +  V+ GSL
Sbjct: 336 ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI--VVEGSL 393

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D YVKC  +  A   F               L Y Q +NL ++ ++F Q++   +  + 
Sbjct: 394 LDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQ 438

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F   S++         + G+QIH    K     +  VS+ ++DMY K G +D A ++F  
Sbjct: 439 FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRR 498

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +   +VV+WT +I GY +H    EA+ LF++M    ++ D + + + +SAC+    +++ 
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           ++  ++ C        +   + +V    R G++ EA    + +  K +++ W +L+S   
Sbjct: 559 RQIHAQSCLSG-YSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLVSGFA 616

Query: 498 VHGDLE 503
             G  E
Sbjct: 617 QSGYFE 622



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 226/412 (54%), Gaps = 17/412 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K    ++G QLHG ++K GFS +  + N L+ +Y++ G ++ A  +F  M +R+ 
Sbjct: 258 LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR 317

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+ +L+ G  Q G     L+LF +M     KP+  T+++ + A   + ++ NG Q H  
Sbjct: 318 VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY 377

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+G   + VV  S++D+Y KC  I  A   F                 Y      +K 
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKS 422

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F +MQ  G +P++FT+ S LK C +LG+   G QIH  ++ +GF ++V   ++  L+
Sbjct: 423 FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV--YVSSVLI 480

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G L  A ++F  +++  V+SW+++I GY Q +   EA+ LF++++++ ++ D  
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S +   A    ++QG+QIHA +       D S+ N++V +Y +CG + EA   F+++
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 600

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
             K+ V+W  +++G+ + G  +EA+ +F +M    +E +   + + +SA ++
Sbjct: 601 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAAN 652



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 213/448 (47%), Gaps = 34/448 (7%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LID Y   G++N A  VFD+M  R++  W  +   F+          LF +M + +V+ +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 113 EFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           E   +  ++  SG   S     QIH   + SGFE +  + N +ID+Y K G ++ A ++F
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           + + A+  ++W AMI+G    GY ++ +LLF ++               L AC  +    
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G Q+HG ++  GF  S +T +  +LV  Y + G L  A ++F  + Q+  +S++SLI G
Sbjct: 269 FGKQLHGLVLKQGF--SSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
            AQ+  +  A+ LF+++     + D   ++S++   A    +  GKQ H+YA K     D
Sbjct: 327 LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD 386

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V  S++D+Y+KC  I  A E F                 YG+     ++  +F +M +
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQI 431

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
           + + P+   Y ++L  C+  G  +  ++  +++      +  +   S ++D   + G+LD
Sbjct: 432 EGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKHGKLD 490

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVH 499
            A  +   +  +  +  W  +++    H
Sbjct: 491 HALKIFRRLK-ENDVVSWTAMIAGYTQH 517



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 47/389 (12%)

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G  +ID Y   G +N A  +FD MP +SL  WN +   ++      +   LFR+M     
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 211 IPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             DE  F   L+ C G+  S     QIH   ITSGF  S  T I   L+D Y K G L  
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESS--TFICNPLIDLYFKNGFLSS 217

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A++VF+ ++ +  +SW ++I G +Q     EAM LF Q+          VLS+   V   
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI----------VLSACTKV--- 264

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               E GKQ+H    K     +T V N++V +Y + G +  A ++F+ M  ++ V++  +
Sbjct: 265 -EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
           I+G  + G    A+ LF+KM LD  +PD V   ++LSAC+  G +   +++ S       
Sbjct: 324 ISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383

Query: 445 ----------------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK---PS 485
                           C+D  +K   E + C     G+   L+++  +   M ++   P+
Sbjct: 384 TSDIVVEGSLLDLYVKCSD--IKTAHEFFLC----YGQLDNLNKSFQIFTQMQIEGIVPN 437

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLR 514
              + ++L  C   G  +LG ++   +L+
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLK 466


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/676 (36%), Positives = 387/676 (57%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++  LL  G +LH AL+K G   ++  N  L+ MYAK G ++ A  VF ++ E++ 
Sbjct: 274 LQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDY 332

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++  ++QN      +  F +M     +P+   + +   A G LS + NG + H  
Sbjct: 333 ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAY 392

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K     +  VGN+++DMY KCG I  +A++F+ M  +  I+W  ++A +  +    + 
Sbjct: 393 AIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEA 452

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +  ++Q+ G + D     S L+ C  L S+    Q+H + I +G    +  ++   L+
Sbjct: 453 LEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL---LDLILENRLI 509

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y +CG    +  +F  +E+K ++SW+S+I        L  A+ LF ++++ ++Q D  
Sbjct: 510 DIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSV 569

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A  + + +GKQ+H +  +    ++  V +S+VDMY  CG ++ A  +F   
Sbjct: 570 ALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERA 629

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV WT +I   G HG  K+A+ LF++ML   + PD V++LA+L ACSHS LVEE +
Sbjct: 630 KCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGK 689

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            Y   + +  R+KP  EHY+C+VD LGR+G+ +EA   I++MP+ P  A+W  LL ACRV
Sbjct: 690 HYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRV 749

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H +  L       LL L+ DNP NY+++SN+ A+ G WN  +  R     +GL+K    S
Sbjct: 750 HRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACS 809

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+E+   IH F  GD  H  +E IH  L E+ + ++ E G+V   ++ LHD  EE K + 
Sbjct: 810 WIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDM 869

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE++AI   L+    + +PG  IR+ KNLRVCGDCHEF K +SK+ +   VVRDA 
Sbjct: 870 LHKHSERIAIAFGLI----STRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDAN 925

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F GG CSC D+W
Sbjct: 926 RFHHFSGGSCSCEDFW 941



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 247/480 (51%), Gaps = 14/480 (2%)

Query: 31  GVQLHGALVKMGF---SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           G Q+H   V  G      D  L   L+ MY +CG ++ A  +F+ M  R V SW AL+  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 88  FLQNGNAKACLSLFCQMGSSSVK---PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           +L +G+A   + ++  M +S+     P+  TL++ +KA G       G ++HG+ +K G 
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLF 202
           + + +V N++I MY+KCG ++ A R+F+ +   A+ + +WN++++G V  G + + L LF
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           R MQ  G   + +T  + L+ C  LG +  G ++H  L+  G   +++     +L+  Y 
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ---CNALLVMYA 312

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           K G +  A RVF  I +K  ISW+S++  Y Q    AEA++ F ++ +   Q D   + S
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           +       + +  G++ HAYA K     D  V N+++DMY+KCG I+ + ++F  M +++
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD 432

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            ++WT I+  + +     EA+ +  ++  + +  D +   ++L  C     +   ++   
Sbjct: 433 HISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC 492

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
               +  +   +E+   ++D  G  G  D + NL + +  K  I  W ++++ C  +G L
Sbjct: 493 YAIRNGLLDLILENR--LIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRL 549


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/676 (35%), Positives = 383/676 (56%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L  G + H  ++K+GF  D  +   L+ MY K G M+GA  VFD + +R+V
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDV 228

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            ++  ++ G+ ++G+ +    LF +M     KPN  +  + +       ++  G  +H  
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQ 288

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           CM +G   +  V  ++I MY  CG I  A R+FD M  + +++W  MI GY      +  
Sbjct: 289 CMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDA 348

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF  MQE G  PD  T+   + AC S   +    +IH  ++ +GF      ++  +LV
Sbjct: 349 FGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGF--GTDLLVDTALV 406

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG + +AR+VFD + ++ V+SWS++I  Y +     EA E F  ++  +++ D  
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              +++        ++ G +I+  A K        V N++++M +K G I+ A  +F  M
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM 526

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++VVTW V+I GY  HG A+EA+ LF +ML +   P+ V ++ VLSACS +G VEE +
Sbjct: 527 VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGR 586

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +FS L + + + P +E Y C+VD LGRAG LDEA+ LI  MP+KP+ +IW TLL+ACR+
Sbjct: 587 RFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           +G+L++     E  L  +  +   YV +S+++A AG W    ++RK+  S+G++K  G +
Sbjct: 647 YGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCT 706

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV+ ++H F   D +HP   +I+  L  +   +K E G++   +  LH++ E+ KEE+
Sbjct: 707 WIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKRE-GYIPVTQNVLHNVGEQEKEEA 765

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           +  HSEKLAI      G L+   G  IR+FKNLRVCGDCH   K +SK+     + RDA+
Sbjct: 766 ISYHSEKLAIAY----GVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDAS 821

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGDYW
Sbjct: 822 RFHHFKNGVCSCGDYW 837



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 271/516 (52%), Gaps = 11/516 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+   +++ G   ++   N LI +++ CG M  A   FD +  + VV+W A++ G+ Q
Sbjct: 80  GKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQ 139

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G+ K   +LF QM   +++P+  T    + A    + ++ G + H   +K GF  +  +
Sbjct: 140 LGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRI 199

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G +++ MY K G ++ A ++FD +  + + T+N MI GY  +G  +K   LF +MQ+ G 
Sbjct: 200 GTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGF 259

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+  +F S L  C +  ++  G  +H   + +G    V+  +A +L+  Y+ CG +  A
Sbjct: 260 KPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR--VATALIRMYMGCGSIEGA 317

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RRVFD ++ + V+SW+ +I GYA+  N+ +A  LF  ++E  +Q D      ++   A  
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +   ++IH+   +   G D  V  ++V MY KCG I +A ++F+ M  ++VV+W+ +I
Sbjct: 378 ADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMI 437

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G  +EA   F  M  ++VEPD V Y+ +L+AC H G ++   E +++      +
Sbjct: 438 GAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKAD-L 496

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
              I   + +++   + G ++ A+ + E+M V+  +  W  ++    +HG+    RE  +
Sbjct: 497 VSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGN---AREALD 552

Query: 511 ILLRLDGD----NPVNYVMMSNIHADAGSWNECERL 542
           +  R+  +    N V +V + +  + AG   E  R 
Sbjct: 553 LFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRF 588


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 237/680 (34%), Positives = 391/680 (57%), Gaps = 7/680 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C+ +  L  G  +H  ++K G+  +  +   L+DMY+KCG    A  VF  + 
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + ++V W+AL+    Q G ++  + LF  M      PN++T+ + + A+    +++ G  
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH    K GFE +  V N+++ MY K G +++  ++++ M  + LI+WNA ++G    G 
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D+ L +F  M E G IP+ +TF S L +C  L  V  G Q+H  +I +         + 
Sbjct: 497 YDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL--DDNNFVC 554

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KC  L +A   F+ +  + + +W+ +I  YAQ     +A+  FRQ+++  ++
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F L+  +   +  A +E G+Q+H+   K     D  V +++VDMY KCG ++EA  L
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +  ++ + W  II GY ++G   +A+  FR ML + + PDGV +  +LSACSH GLV
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE +E+F+ +  D  + P ++H +C+VD LGR G+ DE ++ I+ M +  +  IW+T+L 
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           A ++H +L LG +    L  L  +   +Y+++SNI A  G W++ +R+R L  SKG+KK 
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SWVE + ++H F   D +HP  ++IH  L E+++ +   + +V   +Y LH++ E  
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELA-SIQYVPKTEYVLHNVGETE 913

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+E+LR HSE+LA+G AL+    +    K IR+FKNLR+C DCH+ +K +S I     VV
Sbjct: 914 KKENLRFHSERLALGFALI----STSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVV 969

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F+ G CSC D+W
Sbjct: 970 RDVRRFHHFKNGACSCNDFW 989



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 253/479 (52%), Gaps = 4/479 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L+ CS  + LD G Q+H    K+G   DL + + L+D+YAKCGE+  A  +F  M 
Sbjct: 216 LATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP 275

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+N V+W  L+ G+ Q G+    L LFC M    VK NEFTL+T +K      +++ G  
Sbjct: 276 EQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQV 335

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K G+E N  +G  ++DMYSKCG   +A  +F  +    ++ W+A+I      G 
Sbjct: 336 IHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQ 395

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S++ + LF  M+    +P+++T  S L A  + G++  G  IH  +   GF   V   ++
Sbjct: 396 SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDV--AVS 453

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  Y+K GC+ +  ++++ +  + +ISW++ + G          + +F  + E    
Sbjct: 454 NALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI 513

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + +   S++G  +    V  G+Q+HA+  K     +  V  +++DMY KC  +++A   
Sbjct: 514 PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVA 573

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN + V+++ TWTVIIT Y +    ++A+  FR+M  + V+P+       LS CS    +
Sbjct: 574 FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL 633

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           E  Q+  S +     +       S +VD   + G ++EA+ L E++  + +IA W T++
Sbjct: 634 EGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEALIRRDTIA-WNTII 690



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 229/428 (53%), Gaps = 2/428 (0%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+V +S   + +  +  LR C+    L     +HG +VK   + D  L   L+++YAKC 
Sbjct: 102 NQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR 161

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
               A  V  KM +R+VVSWTAL+ G +  G A   + LF +M +  + PNEFTL+T +K
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A  +  +++ G Q+H    K G   +  VG++++D+Y+KCG I  A++MF  MP ++ +T
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN ++ GY   G     L LF  M E     +EFT T+ LK C +  ++  G  IH  +I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G  Y     I   LVD Y KCG  ++A  VF  I++  ++ WS+LI    Q+    E+
Sbjct: 342 KCG--YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           ++LF  +R      + + + S++    +   ++ G+ IHA   K     D +VSN++V M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y+K G + + T+L+  M  +++++W   ++G    G+    + +F  ML +   P+   +
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 422 LAVLSACS 429
           +++L +CS
Sbjct: 520 ISILGSCS 527



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 7/322 (2%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           ++S L+ C S  S+G    IHG ++      +  + +  SLV+ Y KC     AR V   
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVI--NPDSHLWVSLVNVYAKCRYSAYARLVLAK 172

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  + V+SW++LI G   E    +++ LF++++   +  + F L++ +   +    ++ G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           KQ+HA A K+   LD  V +++VD+Y KCG I+ A+++F  MP +N VTW V++ GY + 
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G     + LF  M+  DV+ +      VL  C++S  +++ Q   S +   K      E 
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII--KCGYEGNEF 350

Query: 457 YSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
             C +VD   + G   +A  + +++  KP I +W  L++     G  E   ++   L+RL
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFH-LMRL 408

Query: 516 DGDNPVNYVMMSNIHADAGSWN 537
               P  Y + S + A   + N
Sbjct: 409 GDTLPNQYTICSLLSAATNTGN 430


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/640 (38%), Positives = 379/640 (59%), Gaps = 16/640 (2%)

Query: 64   NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
            N A   +  + + NV SW +++    + G++   L  F  +    + P   +    IK+ 
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025

Query: 124  GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
              L  + +G   H      GFE +  V +++IDMYSKCG++ +A  +FD +P +++++W 
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085

Query: 184  AMIAGYVLAGYSDKGLLLFR-------KMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQ 235
            +MI GYV    +D  LLLF+       ++++   +P D     S L AC  +   G    
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145

Query: 236  IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
            +HGF++  GF  S+   +  +L+D Y KCG  + +++VFD +E+K  ISW+S+I  YAQ 
Sbjct: 2146 VHGFVVKKGFDGSIG--VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 2203

Query: 296  ENLAEAMELFR-QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA+E+F   +R   ++ +   LS+++   A    +  GK IH    K+    +  V
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 2263

Query: 355  SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
              SI+DMY KCG ++ A + F+ M  KNV +WT ++ GYG HG AKEA+ +F KM+   V
Sbjct: 2264 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGV 2323

Query: 415  EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            +P+ + +++VL+ACSH+GLVEE   +F+ + +   ++P IEHY C+VD  GRAG L+EA 
Sbjct: 2324 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 2383

Query: 475  NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            NLI+ M +KP   +W +LL ACR+H +++LG    + L  LD DN   YV++SN++ADAG
Sbjct: 2384 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 2443

Query: 535  SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
             W + ER+R L +++ L K  G S VE+   +H F  GD  HP  E I++ L ++   + 
Sbjct: 2444 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLEL- 2502

Query: 595  EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
            +++G+V  +   LHD+ EE KE  LRVHSEKLA+      G +N  PG  I + KNLRVC
Sbjct: 2503 QKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAF----GVMNSAPGTTINIIKNLRVC 2558

Query: 655  GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            GDCH  IK +SK++   FVVRD+ RFH F+ GVCSCGDYW
Sbjct: 2559 GDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 217/431 (50%), Gaps = 44/431 (10%)

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG------MQIHGMCMKSGFEWNPV 149
            CLS    +  S   P   T   NI+A   L  ++N        QIH   ++SG   + +
Sbjct: 3   PCLSYTHDVFPSKNIP--LTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           +   +I +YS  GRI  A  +F  +      TWN +I    + G S++ L+L++ M   G
Sbjct: 61  LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG---- 265
              D+FTF   +KAC +  S+  G  +HG LI  GF  S    +  +L+DFY KCG    
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF--SGDVFVQNNLIDFYFKCGHTRF 178

Query: 266 -------------------------C--LVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
                                    C  L EARR+FD I  K+V+SW+++I GY + +  
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+ELF++++  ++  + + + S++    +  ++  G+ IH YA K    +   +  ++
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG I +A E+F  MP K++ TW  +IT  G HGL +EA+ LF +M   +V+PD 
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA---KN 475
           + ++ VL AC H   V+E   YF+R+     + P  EHY C+ +   R+  LDEA     
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418

Query: 476 LIESMPVKPSI 486
            + S+   PSI
Sbjct: 419 EVGSLANSPSI 429



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 221/432 (51%), Gaps = 19/432 (4%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            L+  R     +++ CS    L  G   H      GF  DL +++ LIDMY+KCG++  A 
Sbjct: 2011 LIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDAR 2070

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--------GSSSVKPNEFTLSTN 119
            A+FD++  RNVVSWT+++ G++QN  A   L LF             ++V  +   + + 
Sbjct: 2071 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 2130

Query: 120  IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            + A   +S       +HG  +K GF+ +  VGN+++D Y+KCG+   + ++FD M  K  
Sbjct: 2131 LSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD 2190

Query: 180  ITWNAMIAGYVLAGYSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
            I+WN+MIA Y  +G S + L +F  M  H G   +  T ++ L AC   G++  G  IH 
Sbjct: 2191 ISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHD 2250

Query: 239  FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
             +I     Y+V   +  S++D Y KCG +  A++ FD +++K+V SW++++ GY      
Sbjct: 2251 QVIKMDLEYNV--CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRA 2308

Query: 299  AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY-AAKVPSGLDTSVSN- 356
             EA+++F ++    ++ +     S++   +   LVE+G   H + A K    ++  + + 
Sbjct: 2309 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG--WHWFNAMKHKYDIEPGIEHY 2366

Query: 357  -SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
              +VD++ + G ++EA  L   M +K + V W  ++     H      +G      L ++
Sbjct: 2367 GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIH--KNVDLGEIAAQKLFEL 2424

Query: 415  EPDGVAYLAVLS 426
            +PD   Y  +LS
Sbjct: 2425 DPDNCGYYVLLS 2436



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 31/246 (12%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+  L +D G  +HG+L+K GFS D+ + N+LID Y KCG    A  VF+KM  RNV
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191

Query: 79  VSWT-------------------------------ALMCGFLQNGNAKACLSLFCQMGSS 107
           VSWT                               A++ G+++N   +  L LF +M + 
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE 251

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           ++ PNE+T+ + IKA   +  +  G  IH   +K+  E    +G ++IDMYSKCG I +A
Sbjct: 252 NIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDA 311

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ MP KSL TWN+MI    + G   + L LF +M+     PD  TF   L AC  +
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371

Query: 228 GSVGGG 233
            +V  G
Sbjct: 372 KNVKEG 377



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 44/376 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  +++ G S D +L   LI +Y+  G +  A  +F ++      +W  ++     NG
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            ++  L L+  M    +  ++FT    IKA     S++ G  +HG  +K GF  +  V N
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 153 SIIDMYSKCGR-------------------------------INEAARMFDVMPAKSLIT 181
           ++ID Y KCG                                + EA R+FD +P+K++++
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W AMI GY+     ++ L LF++MQ     P+E+T  S +KAC  +G +  G  IH + I
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +     V   +  +L+D Y KCG + +A  VF+ + +KS+ +W+S+I          EA
Sbjct: 285 KNCIEIGV--YLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG------KQIHAYAAKVPSGLDTSVS 355
           + LF ++   +++ D      ++        V++G         H   A +P   +    
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYEC--- 399

Query: 356 NSIVDMYLKCGLIDEA 371
             + ++Y +   +DEA
Sbjct: 400 --MTELYARSNNLDEA 413



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 46/308 (14%)

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  +I SG   S   ++   L+  Y   G +  A  +F  I+     +W+ +I     
Sbjct: 45  QIHAKIIRSGL--SNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                +A+ L++ +  + +  D F    ++    +F  ++ GK +H    K     D  V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 355 SNSIVDMYLKCGL-------------------------------IDEATELFNEMPVKNV 383
            N+++D Y KCG                                + EA  +F+E+P KNV
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+WT +I GY ++   +EA+ LF++M  +++ P+    ++++ AC+  G++        R
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILT-----LGR 277

Query: 444 LCNDKRMKPRIE----HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +D  +K  IE      + ++D   + G + +A  + E+MP K S+  W +++++  VH
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336

Query: 500 GDLELGRE 507
           G   LG+E
Sbjct: 337 G---LGQE 341



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 1/152 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++  +L  G  +H   +K      + L   LIDMY+KCG +  A  VF+ M  +++
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHG 137
            +W +++     +G  +  L+LF +M   +VKP+  T    + A   + +V+ G      
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTR 383

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           M    G    P     + ++Y++   ++EA +
Sbjct: 384 MTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 43/258 (16%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +QIHA   +     D  ++  ++ +Y   G I  A  LF ++      TW +II     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGL----------VE 435
           GL+++A+ L++ M+   +  D   +  V+ AC+           H  L          V+
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 436 ESQEYFSRLCNDKRM------KPRIEH---YSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            +   F   C   R       K R+ +   ++ ++  L   G L EA+ + + +P K ++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-NV 222

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDN--PVNYVMMSNIHADAGSWNECERLRK 544
             W  +++    +   E   E  E+  R+  +N  P  Y M+S I A       C  +  
Sbjct: 223 VSWTAMINGYIRNQQPE---EALELFKRMQAENIFPNEYTMVSLIKA-------CTEMGI 272

Query: 545 LARSKGLKKVAGRSWVEV 562
           L   +G+   A ++ +E+
Sbjct: 273 LTLGRGIHDYAIKNCIEI 290


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/640 (38%), Positives = 379/640 (59%), Gaps = 16/640 (2%)

Query: 64   NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
            N A   +  + + NV SW +++    + G++   L  F  +    + P   +    IK+ 
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 124  GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
              L  + +G   H      GFE +  V +++IDMYSKCG++ +A  +FD +P +++++W 
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 184  AMIAGYVLAGYSDKGLLLFR-------KMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQ 235
            +MI GYV    +D  LLLF+       ++++   +P D     S L AC  +   G    
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272

Query: 236  IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
            +HGF++  GF  S+   +  +L+D Y KCG  + +++VFD +E+K  ISW+S+I  YAQ 
Sbjct: 1273 VHGFVVKKGFDGSIG--VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 1330

Query: 296  ENLAEAMELFR-QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA+E+F   +R   ++ +   LS+++   A    +  GK IH    K+    +  V
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390

Query: 355  SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
              SI+DMY KCG ++ A + F+ M  KNV +WT ++ GYG HG AKEA+ +F KM+   V
Sbjct: 1391 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGV 1450

Query: 415  EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            +P+ + +++VL+ACSH+GLVEE   +F+ + +   ++P IEHY C+VD  GRAG L+EA 
Sbjct: 1451 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 1510

Query: 475  NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            NLI+ M +KP   +W +LL ACR+H +++LG    + L  LD DN   YV++SN++ADAG
Sbjct: 1511 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570

Query: 535  SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
             W + ER+R L +++ L K  G S VE+   +H F  GD  HP  E I++ L ++   + 
Sbjct: 1571 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLEL- 1629

Query: 595  EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
            +++G+V  +   LHD+ EE KE  LRVHSEKLA+      G +N  PG  I + KNLRVC
Sbjct: 1630 QKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAF----GVMNSAPGTTINIIKNLRVC 1685

Query: 655  GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            GDCH  IK +SK++   FVVRD+ RFH F+ GVCSCGDYW
Sbjct: 1686 GDCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/431 (32%), Positives = 217/431 (50%), Gaps = 44/431 (10%)

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG------MQIHGMCMKSGFEWNPV 149
            CLS    +  S   P   T   NI+A   L  ++N        QIH   ++SG   + +
Sbjct: 3   PCLSYTHDVFPSKNIP--LTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           +   +I +YS  GRI  A  +F  +      TWN +I    + G S++ L+L++ M   G
Sbjct: 61  LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG---- 265
              D+FTF   +KAC +  S+  G  +HG LI  GF  S    +  +L+DFY KCG    
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF--SGDVFVQNNLIDFYFKCGHTRF 178

Query: 266 -------------------------C--LVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
                                    C  L EARR+FD I  K+V+SW+++I GY + +  
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+ELF++++  ++  + + + S++    +  ++  G+ IH YA K    +   +  ++
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG I +A E+F  MP K++ TW  +IT  G HGL +EA+ LF +M   +V+PD 
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA---KN 475
           + ++ VL AC H   V+E   YF+R+     + P  EHY C+ +   R+  LDEA     
Sbjct: 359 ITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTK 418

Query: 476 LIESMPVKPSI 486
            + S+   PSI
Sbjct: 419 EVGSLANSPSI 429



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 23/434 (5%)

Query: 8    LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            L+  R     +++ CS    L  G   H      GF  DL +++ LIDMY+KCG++  A 
Sbjct: 1138 LIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDAR 1197

Query: 68   AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--------GSSSVKPNEFTLSTN 119
            A+FD++  RNVVSWT+++ G++QN  A   L LF             ++V  +   + + 
Sbjct: 1198 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 1257

Query: 120  IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            + A   +S       +HG  +K GF+ +  VGN+++D Y+KCG+   + ++FD M  K  
Sbjct: 1258 LSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD 1317

Query: 180  ITWNAMIAGYVLAGYSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
            I+WN+MIA Y  +G S + L +F  M  H G   +  T ++ L AC   G++  G  IH 
Sbjct: 1318 ISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHD 1377

Query: 239  FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
             +I     Y+V   +  S++D Y KCG +  A++ FD +++K+V SW++++ GY      
Sbjct: 1378 QVIKMDLEYNV--CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRA 1435

Query: 299  AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTS 353
             EA+++F ++    ++ +     S++   +   LVE+G        H Y   +  G++  
Sbjct: 1436 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY--DIEPGIEH- 1492

Query: 354  VSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
                +VD++ + G ++EA  L   M +K + V W  ++     H      +G      L 
Sbjct: 1493 -YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIH--KNVDLGEIAAQKLF 1549

Query: 413  DVEPDGVAYLAVLS 426
            +++PD   Y  +LS
Sbjct: 1550 ELDPDNCGYYVLLS 1563



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 134/263 (50%), Gaps = 31/263 (11%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V   + +++      ++ C+  L +D G  +HG+L+K GFS D+ + N+LID Y KCG
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174

Query: 62  EMNGACAVFDKMLERNVVSWT-------------------------------ALMCGFLQ 90
               A  VF+KM  RNVVSWT                               A++ G+++
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  L LF +M + ++ PNE+T+ + IKA   +  +  G  IH   +K+  E    +
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYL 294

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G ++IDMYSKCG I +A  +F+ MP KSL TWN+MI    + G   + L LF +M+    
Sbjct: 295 GTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354

Query: 211 IPDEFTFTSTLKACGSLGSVGGG 233
            PD  TF   L AC  + +V  G
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEG 377



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 44/376 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  +++ G S D +L   LI +Y+  G +  A  +F ++      +W  ++     NG
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            ++  L L+  M    +  ++FT    IKA     S++ G  +HG  +K GF  +  V N
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 153 SIIDMYSKCGR-------------------------------INEAARMFDVMPAKSLIT 181
           ++ID Y KCG                                + EA R+FD +P+K++++
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W AMI GY+     ++ L LF++MQ     P+E+T  S +KAC  +G +  G  IH + I
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +     +   +  +L+D Y KCG + +A  VF+ + +KS+ +W+S+I          EA
Sbjct: 285 KNCI--EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG------KQIHAYAAKVPSGLDTSVS 355
           + LF ++   +++ D      ++        V++G         H   A +P   +    
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYEC--- 399

Query: 356 NSIVDMYLKCGLIDEA 371
             + ++Y +   +DEA
Sbjct: 400 --MTELYARSNNLDEA 413



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 46/308 (14%)

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  +I SG   S   ++   L+  Y   G +  A  +F  I+     +W+ +I     
Sbjct: 45  QIHAKIIRSGL--SNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                +A+ L++ +  + +  D F    ++    +F  ++ GK +H    K     D  V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 355 SNSIVDMYLKCGL-------------------------------IDEATELFNEMPVKNV 383
            N+++D Y KCG                                + EA  +F+E+P KNV
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+WT +I GY ++   +EA+ LF++M  +++ P+    ++++ AC+  G++        R
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILT-----LGR 277

Query: 444 LCNDKRMKPRIE----HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +D  +K  IE      + ++D   + G + +A  + E+MP K S+  W +++++  VH
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336

Query: 500 GDLELGRE 507
           G   LG+E
Sbjct: 337 G---LGQE 341



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 1/150 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++  +L  G  +H   +K      + L   LIDMY+KCG +  A  VF+ M  +++
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHG 137
            +W +++     +G  +  L+LF +M   +VKP+  T    + A   + +V+ G      
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTR 383

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           M    G    P     + ++Y++   ++EA
Sbjct: 384 MTQHYGIAPIPEHYECMTELYARSNNLDEA 413



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 43/258 (16%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +QIHA   +     D  ++  ++ +Y   G I  A  LF ++      TW +II     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGL----------VE 435
           GL+++A+ L++ M+   +  D   +  V+ AC+           H  L          V+
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 436 ESQEYFSRLCNDKRM------KPRIEH---YSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            +   F   C   R       K R+ +   ++ ++  L   G L EA+ + + +P K ++
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-NV 222

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDN--PVNYVMMSNIHADAGSWNECERLRK 544
             W  +++    +   E   E  E+  R+  +N  P  Y M+S I A       C  +  
Sbjct: 223 VSWTAMINGYIRNQQPE---EALELFKRMQAENIFPNEYTMVSLIKA-------CTEMGI 272

Query: 545 LARSKGLKKVAGRSWVEV 562
           L   +G+   A ++ +E+
Sbjct: 273 LTLGRGIHDYAIKNCIEI 290


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/710 (36%), Positives = 402/710 (56%), Gaps = 40/710 (5%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLE 75
           SL+  SK   +    Q+H  ++K G    L   + LI+  A  + G+++ A ++F+ + E
Sbjct: 32  SLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N+  W +++ G   + +    L  F +M  S V+PN +T    +K+   L+S   G QI
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA--------------------------- 168
           H   +K GF  +  +  S+I+MY++ G +N A                            
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 169 ----RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
               ++FD MP K +++WNAMIAGY   G S + LLLF  M++    P+E T  S L AC
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               ++  G  +  ++   G   ++K V   +L+D Y KCG L  AR +FD + ++ VIS
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLV--NALIDMYSKCGDLQTARELFDDMLERDVIS 329

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+ +I GY    +  EA+ LFR++    ++       S++   A    ++ GK IHAY  
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           K  + + TS+S S++D+Y KCG I  A ++F+ M +K++ +W  +I G   HG A +A  
Sbjct: 390 KNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFE 449

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF KM  D +EP+ + ++ +LSAC H+GLV+  Q++FS +  D ++ P+ +HY C++D L
Sbjct: 450 LFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLL 509

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GRAG  +EA++L+++M VKP  AIW +LL ACR HG +ELG  V E L  L+ DNP  YV
Sbjct: 510 GRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYV 569

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           ++SNI+A AG W++  R+R     +G+KKV G + +EVD  +H F  GD  HP +E I++
Sbjct: 570 LLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYR 629

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
           +L E+++++K   GFV      L+D+ EE KE +L  HSEKLAI   L+    + +PG  
Sbjct: 630 MLEEVDEQLK-VFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLI----STKPGTP 684

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IR+ KNLRVC +CH   K +SKI     + RD  RFH F+ G CSC DYW
Sbjct: 685 IRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/661 (36%), Positives = 391/661 (59%), Gaps = 7/661 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  + K+G   D  +   LID Y+  G ++ A  VFD +  +++VSWT ++  + +N  
Sbjct: 158 LHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCF 217

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  L LF QM     KPN FT+S  +K+   L +   G  +HG  +K  ++ +  VG +
Sbjct: 218 YEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++++Y+K G I +A R+F+ MP   LI W+ MIA Y  +  S + L LF +M++   +P+
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            FTF S L+AC S  S+  G QIH  ++  G   +V   ++ +++D Y KCG +  + ++
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNV--FVSNAIMDVYAKCGEIENSMKL 395

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F+ +  ++ ++W+++I+GY Q  +   AM LF  + E  +Q      SS++   A  A +
Sbjct: 396 FEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL 455

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           E G QIH+   K     DT V+NS++DMY KCG I++A   F++M  ++ V+W  +I GY
Sbjct: 456 EPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGY 515

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG++ EA+ LF  M   D +P+ + ++ VLSACS++GL+ + Q +F  +  D  +KP 
Sbjct: 516 SMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPC 575

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           IEHY+C+V  LGR GR DEA  LI  +  +PS+ +W+ LL AC +H  ++LGR   + +L
Sbjct: 576 IEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVL 635

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            ++  +   +V++SN++A AG W+    +RK  + K ++K  G SWVE    +H+F  GD
Sbjct: 636 EMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGD 695

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HP  + I  +L  + K+ ++  G+V      L D+Q++ KE  L VHSE+LA+   L+
Sbjct: 696 TSHPDIKLICAMLEWLNKKTRDA-GYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLI 754

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           R  L+      IR+ KNLR+C DCH  +K +SK+++   V+RD  RFH F  GVCSCGDY
Sbjct: 755 RTPLSCS----IRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDY 810

Query: 694 W 694
           W
Sbjct: 811 W 811



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 240/470 (51%), Gaps = 4/470 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH  ++K G S DL   N L++ Y +   +  A  +FD+M + N +S+  L  G+ +
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +      L    ++     + N F  +T +K    +        +H    K G   +  V
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G ++ID YS  G ++ A  +FD +  K +++W  M+A Y    + ++ L LF +M+  G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+ FT +  LK+C  L +   G  +HG  +   + + +   IA  L++ Y K G +++A
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA--LLELYAKSGEIIDA 291

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +R+F+ + +  +I WS +I  YAQ +   EA++LF ++R+ S+  + F  +S++   A  
Sbjct: 292 QRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASS 351

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             ++ GKQIH+   K     +  VSN+I+D+Y KCG I+ + +LF E+P +N VTW  II
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY + G  + A+ LF  ML  D++P  V Y +VL A +    +E   +  S        
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           K  +   S ++D   + GR+++A+   + M  +  ++ W  ++    +HG
Sbjct: 472 KDTVVANS-LIDMYAKCGRINDARLTFDKMNKRDEVS-WNAMICGYSMHG 519



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 208/379 (54%), Gaps = 6/379 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L+ C      + G  +HG  +K  +  DL +   L+++YAK GE+  A  +F++M 
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + +++ W+ ++  + Q+  +K  L LF +M  +SV PN FT ++ ++A     S++ G Q
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ 359

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K G   N  V N+I+D+Y+KCG I  + ++F+ +P ++ +TWN +I GYV  G 
Sbjct: 360 IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGD 419

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ + LF  M EH   P E T++S L+A  SL ++  G QIH   I +   Y+  TV+A
Sbjct: 420 GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKT--MYNKDTVVA 477

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SL+D Y KCG + +AR  FD + ++  +SW+++I GY+      EA+ LF  ++    +
Sbjct: 478 NSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCK 537

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEAT 372
            +      ++   ++  L+ +G Q H  +      +   + +    ++L  + G  DEA 
Sbjct: 538 PNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAM 596

Query: 373 ELFNEMPVK-NVVTWTVII 390
           +L  E+  + +V+ W  ++
Sbjct: 597 KLIGEIAYQPSVMVWRALL 615



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 168/286 (58%), Gaps = 6/286 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+V      A  L+ C+ ++ LD G Q+H  ++K G + ++ ++N ++D+YAKCGE+  +
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F+++ +RN V+W  ++ G++Q G+ +  ++LF  M    ++P E T S+ ++AS  L
Sbjct: 393 MKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASL 452

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++E G+QIH + +K+ +  + VV NS+IDMY+KCGRIN+A   FD M  +  ++WNAMI
Sbjct: 453 AALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMI 512

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY + G S + L LF  MQ     P++ TF   L AC + G +  G Q H   ++    
Sbjct: 513 CGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKD-- 569

Query: 247 YSVKTVIA--GSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLI 289
           Y +K  I     +V    + G   EA ++  ++  Q SV+ W +L+
Sbjct: 570 YDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALL 615



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 148/316 (46%), Gaps = 29/316 (9%)

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  +H  ++  G   S+       L++FYV+   L +A ++FD + Q + IS+ +L  G
Sbjct: 53  AGKHLHCHILKRG--TSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQG 110

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           Y+++    +A+    ++ +   +V+ FV ++++ +     L      +HA   K+    D
Sbjct: 111 YSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHAD 170

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V  +++D Y   G +D A  +F+++  K++V+WT ++  Y ++   +E++ LF +M +
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFS----------RLCNDKRMKPRIEHYSCIV 461
              +P+       L +C   GL     E F+          + C D  +   I     ++
Sbjct: 231 MGYKPNNFTISGALKSC--LGL-----EAFNVGKSVHGCALKGCYDHDLFVGIA----LL 279

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN-- 519
           +   ++G + +A+ L E MP K  +  W  +++    +   +  +E  ++ LR+   +  
Sbjct: 280 ELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIAR---YAQSDRSKEALDLFLRMRQTSVV 335

Query: 520 PVNYVMMSNIHADAGS 535
           P N+   S + A A S
Sbjct: 336 PNNFTFASVLQACASS 351


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/626 (37%), Positives = 384/626 (61%), Gaps = 8/626 (1%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD++ +R+V+SW +++ G++ NG ++  L LF QM    +  +  T+ + +        
Sbjct: 207 LFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGM 266

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +  G  +HG  +K+ F     + N ++DMYSK G +N A ++F+ M  +S+++W +MIAG
Sbjct: 267 LLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG 326

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G SD  + LF +M++ G  PD FT T+ L AC   G +  G  +H ++  +     
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSD 386

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   ++ +L+D Y KCG + +A  VF  ++ K ++SW+++I GY++     EA+ LF ++
Sbjct: 387 L--FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM 444

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           +  S + +   ++ ++   A  A +E+G++IH +  +    LD  V+N++VDMYLKCG +
Sbjct: 445 QYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 503

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A  LF+ +P K++V+WTV+I GYG HG   EA+  F +M    +EPD V+++++L AC
Sbjct: 504 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 563

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGL++E   +F+ + N+  ++P+ EHY+CIVD L RAG L +A   I+ MP++P   I
Sbjct: 564 SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 623

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  LL  CR++ D++L  +V E +  L+ +N   YV+++NI+A+A  W E ++LR+    
Sbjct: 624 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGR 683

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           +GL+K  G SW+E+  ++H F  GD +HPL  KI  +L +   RMKEE G    ++YAL 
Sbjct: 684 RGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEE-GHFPKMRYALI 742

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
              +  KE +L  HSEK+A+      G L+  PGK +RV KNLRVCGDCHE  K +SK++
Sbjct: 743 KADDTEKEMALCGHSEKIAMAF----GILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMV 798

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           K   ++RD+ RFH F+ G CSC  +W
Sbjct: 799 KRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 218/410 (53%), Gaps = 13/410 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS   +L  G  LHG  +K  F  +L LNN L+DMY+K G +N A  VF+ M ER+VVSW
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ + G +   + LF +M    + P+ FT++T + A      +ENG  +H    +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE 380

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +  + +  V N+++DMY+KCG + +A  +F  M  K +++WN MI GY      ++ L L
Sbjct: 381 NKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNL 440

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +MQ + + P+  T    L AC SL ++  G +IHG ++ +GF  S+   +A +LVD Y
Sbjct: 441 FVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGF--SLDRHVANALVDMY 497

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
           +KCG L  AR +FD+I +K ++SW+ +I GY      +EA+  F ++R   ++ D     
Sbjct: 498 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 557

Query: 322 SMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           S++   +   L+++G      +       P     +    IVD+  + G + +A +    
Sbjct: 558 SILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYAC---IVDLLARAGNLSKAYKFIKM 614

Query: 378 MPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           MP++ +   W  ++ G   +   K A  +   +   ++EP+   Y  +L+
Sbjct: 615 MPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVF--ELEPENTGYYVLLA 662



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 240/497 (48%), Gaps = 61/497 (12%)

Query: 55  DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN-E 113
           ++Y  C  + G   +  + ++  +  +   +C F + GN +  + L  Q    S KP+ E
Sbjct: 46  NLYHSCATI-GTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQ----SPKPDLE 100

Query: 114 F-TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG---------- 162
             T  + ++    L S+++G +IH +   +  E + V+G+ ++ MY  CG          
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160

Query: 163 ---------------------------------------RINEAARMFDVMPAKSLITWN 183
                                                  R+  A ++FD +  + +I+WN
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +MI+GYV  G S+KGL LF +M   G   D  T  S +  C + G +  G  +HG+ I +
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
            F    +  +   L+D Y K G L  A +VF+ + ++SV+SW+S+I GYA+E     ++ 
Sbjct: 281 SF--GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF ++ +  +  D F +++++   A   L+E GK +H Y  +     D  VSN+++DMY 
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYA 398

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG + +A  +F+EM VK++V+W  +I GY K+ L  EA+ LF +M  +  +P+ +    
Sbjct: 399 KCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMAC 457

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           +L AC+    +E  QE    +  +     R    + +VD   + G L  A+ L + +P K
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDR-HVANALVDMYLKCGALGLARLLFDMIPEK 516

Query: 484 PSIAIWQTLLSACRVHG 500
             ++ W  +++   +HG
Sbjct: 517 DLVS-WTVMIAGYGMHG 532



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 153/277 (55%), Gaps = 9/277 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   LL+ G  +H  + +     DL ++N L+DMYAKCG M  A +VF +M  +++
Sbjct: 359 LHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDI 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+ +N      L+LF +M  +S KPN  T++  + A   L+++E G +IHG 
Sbjct: 419 VSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGH 477

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++GF  +  V N+++DMY KCG +  A  +FD++P K L++W  MIAGY + GY  + 
Sbjct: 478 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEA 537

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF--LITSGFPYSVKTVIAGS 256
           +  F +M+  G  PDE +F S L AC   G +  G    GF  ++ +      K+     
Sbjct: 538 IAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW---GFFNMMRNNCCIEPKSEHYAC 594

Query: 257 LVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILG 291
           +VD   + G L +A +   +  IE  + I W +L+ G
Sbjct: 595 IVDLLARAGNLSKAYKFIKMMPIEPDATI-WGALLCG 630



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 8/193 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+ G ++HG +++ GFS D  + N L+DMY KCG +  A  +FD + E+++
Sbjct: 459 LPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDL 518

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT ++ G+  +G     ++ F +M +S ++P+E +  + + A      ++ G     M
Sbjct: 519 VSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNM 578

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLAGYS 195
            M++     P   +   I+D+ ++ G +++A +   +MP +   T W A++ G  +  Y 
Sbjct: 579 -MRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI--YH 635

Query: 196 DKGLLLFRKMQEH 208
           D  + L  K+ EH
Sbjct: 636 D--VKLAEKVAEH 646


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/667 (37%), Positives = 390/667 (58%), Gaps = 8/667 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L++  ++H    K GF  DL + N LI MYAKCG ++ A  VFD M +R+V+SW A++ G
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGG 309

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             QNG      ++F +M      P+  T  + +       + E   ++H   ++ G   +
Sbjct: 310 LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG++ + MY +CG I++A  +FD +  +++ TWNAMI G        + L LF +M+ 
Sbjct: 370 LRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR 429

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  TF + L A     ++    ++H + I +G    V   +  +LV  Y KCG  
Sbjct: 430 EGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL---VDLRVGNALVHMYAKCGNT 486

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           + A++VFD + +++V +W+ +I G AQ     EA  LF Q+    +  D     S++   
Sbjct: 487 MYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC 546

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A    +E  K++H++A       D  V N++V MY KCG +D+A  +F++M  ++V +WT
Sbjct: 547 ASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWT 606

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           V+I G  +HG   +A+ LF KM L+  +P+G +++AVLSACSH+GLV+E +  F  L  D
Sbjct: 607 VMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQD 666

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             ++P +EHY+C+VD LGRAG+L+EAK+ I +MP++P  A W  LL AC  +G+LE+   
Sbjct: 667 YGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEF 726

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             +  L+L   +   YV++SNI+A  G+W +   +R + + +G++K  GRSW+EVD +IH
Sbjct: 727 AAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIH 786

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F  GD +HP +++I+  L ++ KR+K E G+V   +  L +  +E KE++L  HSEKLA
Sbjct: 787 SFVVGDTSHPESKEIYAKLKDLIKRLKAE-GYVPDTRLVLRNTDQEYKEQALCSHSEKLA 845

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I    V G ++      IRV+KNLRVC DCH   K +SK+     V RDA RFH F+ GV
Sbjct: 846 I----VYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGV 901

Query: 688 CSCGDYW 694
           CSCGDYW
Sbjct: 902 CSCGDYW 908



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 270/539 (50%), Gaps = 14/539 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C   + L +G ++H  +++ GF  D+ +   L++MY KCG ++ A  +FDKM+ERNV
Sbjct: 37  LKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNV 96

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWT ++ G    G  +     F QM      PN +T  + + A+    ++E   ++H  
Sbjct: 97  ISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSH 156

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +G   +  VGN+++ MY+K G I++A  +FD M  + + +W  MI G    G   + 
Sbjct: 157 AVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEA 216

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACG--SLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             LF +M+  G +P+  T+ S L A    S G++    ++H     +GF   ++  +  +
Sbjct: 217 FSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR--VGNA 274

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG + +AR VFD +  + VISW+++I G AQ     EA  +F ++++     D
Sbjct: 275 LIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPD 334

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                S++         E  K++H +A +V    D  V ++ V MY++CG ID+A  +F+
Sbjct: 335 STTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFD 394

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           ++ V+NV TW  +I G  +    +EA+ LF +M  +   PD   ++ +LSA      +E 
Sbjct: 395 KLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW 454

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +E  S   +   +  R+   + +V    + G    AK + + M V+ ++  W  ++S  
Sbjct: 455 VKEVHSYAIDAGLVDLRVG--NALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGL 511

Query: 497 RVHGDLELGREVGEILLRL--DGDNP--VNYVMMSNIHADAGSWNECERLRKLARSKGL 551
             HG    G E   + L++  +G  P    YV + +  A  G+    + +   A + GL
Sbjct: 512 AQHG---CGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGL 567



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 233/470 (49%), Gaps = 33/470 (7%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           ++ G+ + G A+  + ++ QM     +PNE T  + +KA     S++ G +IH   ++SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +  V  ++++MY KCG I++A  +FD M  +++I+W  MI G    G   +    F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +MQ  G IP+ +T+ S L A  S G++    ++H   + +G    ++  +  +LV  Y K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLR--VGNALVHMYAK 178

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            G + +AR VFD + ++ + SW+ +I G AQ     EA  LF Q+       +   L++ 
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPN---LTTY 235

Query: 324 MGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           + +    A+   G     K++H +A K     D  V N+++ MY KCG ID+A  +F+ M
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V++W  +I G  ++G   EA  +F KM  +   PD   YL++L+    +G  E  +
Sbjct: 296 CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355

Query: 439 EYFSR-----LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           E         L +D R+       S  V    R G +D+A+ + + + V+ ++  W  ++
Sbjct: 356 EVHKHAVEVGLVSDLRVG------SAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408

Query: 494 SACRVHGDLELGREVGEILLRL-------DGDNPVNYVMMSNIHADAGSW 536
                    + GRE   + L++       D    VN ++ +N+  +A  W
Sbjct: 409 GGV---AQQKCGREALSLFLQMRREGFFPDATTFVN-ILSANVGEEALEW 454



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 23/378 (6%)

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY   GY++  + ++ +M+  G  P+E T+ S LKAC S  S+  G +IH  +I SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F   V+  +  +LV+ YVKCG + +A+ +FD + +++VISW+ +I G A      EA   
Sbjct: 61  FQSDVR--VETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F Q++      + +   S++   A    +E  K++H++A      LD  V N++V MY K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            G ID+A  +F+ M  +++ +WTV+I G  +HG  +EA  LF +M      P+   YL++
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 425 L--SACSHSGLVEESQEYFSR-----LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
           L  SA + +G +E  +E           +D R+       + ++    + G +D+A+ + 
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVG------NALIHMYAKCGSIDDARLVF 292

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD----NPVNYVMMSNIHADA 533
           + M  +  I+ W  ++     +G    G E   I L++  +    +   Y+ + N H   
Sbjct: 293 DGMCDRDVIS-WNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVST 348

Query: 534 GSWNECERLRKLARSKGL 551
           G+W   + + K A   GL
Sbjct: 349 GAWEWVKEVHKHAVEVGL 366



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 2/188 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V +       L  C+    L++  ++H   V  G   DL + N L+ MYAKCG ++ A 
Sbjct: 532 IVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDAR 591

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD MLER+V SWT ++ G  Q+G     L LF +M     KPN ++    + A     
Sbjct: 592 RVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAG 651

Query: 128 SVENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAM 185
            V+ G  Q   +    G E        ++D+  + G++ EA      MP +     W A+
Sbjct: 652 LVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGAL 711

Query: 186 IAGYVLAG 193
           +   V  G
Sbjct: 712 LGACVTYG 719


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/660 (37%), Positives = 395/660 (59%), Gaps = 8/660 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++HG ++K+GF  +  + N LI  Y K G +  A  +FD++ E +VVSW +++ G + NG
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   L +F QM    V+ +  TL + + A   + ++  G  +HG  +K+ F    V  N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMYSKCG +N A  +F  M   ++++W ++IA YV  G     + LF +MQ  G  P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +T TS + AC    S+  G  +H ++I +G   ++   +  +L++ Y KCG + EAR 
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP--VTNALINMYAKCGSVEEARL 453

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF  I  K ++SW+++I GY+Q     EA+ELF  + ++  + D   ++ ++   A  A 
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAA 512

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +++G++IH +  +     D  V+ ++VDMY KCGL+  A  LF+ +P K++++WTV+I G
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG   EA+  F +M +  +EPD  ++ A+L+ACSHSGL+ E  ++F+ + N+  ++P
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEP 632

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY+C+VD L R G L +A   IESMP+KP   IW  LLS CR+H D++L  +V E +
Sbjct: 633 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI 692

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             L+ DN   YV+++N++A+A  W E ++LRK  + +G K+  G SW+EV  + + F  G
Sbjct: 693 FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 752

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           +  HP  +KI  +L ++  +M+ E  +    +Y L +  +  KE     HSEK A+    
Sbjct: 753 NSKHPQAKKIDVLLSKLTMQMQNE-DYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAF-- 809

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
             G LN  PG+ +RV KN RVCGDCHE  K +SK  K+  V+RD+ RFH F+ G+CSC D
Sbjct: 810 --GILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 266/492 (54%), Gaps = 25/492 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L+ G ++H  ++  G S D  L   L+ MY  CG++     +FDK++   V
Sbjct: 101 LQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKV 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  LM  + + GN +  +SLF +M    V  N +T +  +K    L  V+   ++HG 
Sbjct: 161 FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGY 220

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  N  V NS+I  Y K G +  A  +FD +    +++WN+MI G V+ G+S  G
Sbjct: 221 VLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNG 280

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F +M   G   D  T  S L AC ++G++  G  +HGF + + F  S + V + +L+
Sbjct: 281 LEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACF--SEEVVFSNTLL 338

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L  A  VF  +   +++SW+S+I  Y +E   ++A+ LF +++ + ++ D +
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  + +++G+ +H+Y  K   G +  V+N++++MY KCG ++EA  +F+++
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 458

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           PVK++V+W  +I GY ++ L  EA+ LF  M     +PD +    VL AC+    +++ +
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGR 517

Query: 439 E---------YFSRLCNDKRMKPRIEHYSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           E         YFS L           H +C +VD   + G L  A+ L + +P K  I+ 
Sbjct: 518 EIHGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS- 565

Query: 489 WQTLLSACRVHG 500
           W  +++   +HG
Sbjct: 566 WTVMIAGYGMHG 577



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 227/415 (54%), Gaps = 9/415 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L  G  LHG  VK  FS +++ +N L+DMY+KCG +NGA  VF KM 
Sbjct: 299 LVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +  +VSWT+++  +++ G     + LF +M S  V+P+ +T+++ + A    SS++ G  
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 418

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G   N  V N++I+MY+KCG + EA  +F  +P K +++WN MI GY     
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF  MQ+  + PD+ T    L AC  L ++  G +IHG ++  G+   +   +A
Sbjct: 479 PNEALELFLDMQKQFK-PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLH--VA 535

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LVD Y KCG LV A+ +FD+I +K +ISW+ +I GY       EA+  F ++R   ++
Sbjct: 536 CALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 595

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            D    S+++   +   L+ +G +    + +   G++  + +   +VD+  + G + +A 
Sbjct: 596 PDESSFSAILNACSHSGLLNEGWKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAY 654

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +    MP+K +   W V+++G   H   K A  +   +   ++EPD   Y  VL+
Sbjct: 655 KFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF--ELEPDNTRYYVVLA 707



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 106/213 (49%), Gaps = 12/213 (5%)

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           + +  +L  A+EL  + +   L ++ +   S++ + A+   +E GK++H+        +D
Sbjct: 71  FCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIISNGISVD 128

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            ++   +V MY+ CG + +  ++F+++    V  W ++++ Y K G  +E+V LF+KM  
Sbjct: 129 EALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQK 188

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA---- 467
             V  +   +  VL   +  G V+E +     +     +K      + +V+SL  A    
Sbjct: 189 LGVVGNCYTFTCVLKCFAALGKVKECKRVHGYV-----LKLGFGSNTAVVNSLIAAYFKF 243

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           G ++ A NL + +  +P +  W ++++ C V+G
Sbjct: 244 GGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 275


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/676 (36%), Positives = 390/676 (57%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C     L  G ++HG LVK GFS DL     L +MYAKC +++ A  VFD+M ER++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDL 201

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+ QNG A+  L +   M   ++KP+  T+ + + A   L  +  G +IHG 
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGY 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M++GF+    +  +++DMY+KCG +  A  +FD M  +++++WN+MI  YV      + 
Sbjct: 262 AMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEA 321

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +++F+KM + G  P + +    L AC  LG +  G  IH   +      +V  V   SL+
Sbjct: 322 MVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVV--NSLI 379

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KC  +  A  +F  ++ ++++SW+++ILG+AQ     EA+  F Q++ R+++ D F
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTF 439

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S++   A+ ++    K IH    +     +  V+ ++VDMY KCG I  A  +F+ M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V TW  +I GYG HG+ K A+ LF +M    + P+GV +L+V+SACSHSGLVE   
Sbjct: 500 SERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGL 559

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           + F  +  +  ++P ++HY  +VD LGRAGRL+EA + I  MPVKP++ ++  +L AC++
Sbjct: 560 KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++    +V E L  L+ ++   +V+++NI+  A  W +  ++R     +GL+K  G S
Sbjct: 620 HKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            VE+  E+H F+ G   HP ++KI+  L ++  ++KE  G+V      L  ++++ KE+ 
Sbjct: 680 MVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEA-GYVPDTNLIL-GLEDDVKEQL 737

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLAI   L    LN   G  I V KNLRVC DCH   K +S +     +VRD  
Sbjct: 738 LSSHSEKLAISFGL----LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQ 793

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 250/487 (51%), Gaps = 14/487 (2%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           + K G   + +    L+ ++ + G ++ A  VF+ + ++  V +  ++ GF +  +    
Sbjct: 60  IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           L  F +M    V+P  +  +  +K  G  + +  G +IHG+ +KSGF  +      + +M
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y+KC +++EA ++FD MP + L++WN ++AGY   G +   L +   M E    P   T 
Sbjct: 180 YAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITI 239

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S L A  +L  +  G +IHG+ + +GF   V   IA +LVD Y KCG L  AR +FD +
Sbjct: 240 VSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN--IATALVDMYAKCGSLKTARLLFDGM 297

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
            +++V+SW+S+I  Y Q EN  EAM +F+++ +  ++     +   +   AD   +E+G+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
            IH  + ++    + SV NS++ MY KC  +D A  +F ++  + +V+W  +I G+ ++G
Sbjct: 358 FIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNG 417

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCNDKRMKPRI 454
              EA+  F +M    V+PD   Y++V++A +   +   ++       R C DK     +
Sbjct: 418 RPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDK----NV 473

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGE 510
              + +VD   + G +  A+ LI  M  +  +  W  ++     HG     LEL  E+ +
Sbjct: 474 FVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK 532

Query: 511 ILLRLDG 517
             +R +G
Sbjct: 533 GTIRPNG 539



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 194/369 (52%), Gaps = 8/369 (2%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           SS++    I  +  K+G     +    ++ ++ + G ++EAAR+F+ +  K  + +  M+
Sbjct: 48  SSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTML 107

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G+      DK L  F +M++    P  + FT  LK CG    +  G +IHG L+ SGF 
Sbjct: 108 KGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF- 166

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+       L + Y KC  + EAR+VFD + ++ ++SW++++ GY+Q      A+E+  
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVN 225

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLK 364
            + E +L+     + S++   +   L+  GK+IH YA +  +G D+  +++ ++VDMY K
Sbjct: 226 LMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMR--AGFDSLVNIATALVDMYAK 283

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +  A  LF+ M  +NVV+W  +I  Y ++   KEA+ +F+KML + V+P  V+ +  
Sbjct: 284 CGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L AC+  G +E  + +  +L  +  +   +   + ++    +   +D A ++   +  + 
Sbjct: 344 LHACADLGDLERGR-FIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR- 401

Query: 485 SIAIWQTLL 493
           +I  W  ++
Sbjct: 402 TIVSWNAMI 410



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 142/267 (53%), Gaps = 8/267 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L+ G  +H   V++    ++ + N LI MY KC E++ A ++F K+  R 
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW A++ GF QNG     L+ F QM + +VKP+ FT  + I A   LS   +   IHG
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHG 462

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + M++  + N  V  +++DMY+KCG I  A  +FD+M  + + TWNAMI GY   G    
Sbjct: 463 VVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKA 522

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            L LF +MQ+    P+  TF S + AC   G V  G +    +  +   YS++  +   G
Sbjct: 523 ALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKEN---YSIEPSMDHYG 579

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSV 282
           ++VD   + G L EA   +D I Q  V
Sbjct: 580 AMVDLLGRAGRLNEA---WDFIMQMPV 603


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/678 (37%), Positives = 403/678 (59%), Gaps = 9/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  L+ G ++H  +V+ G+  D+   N L+DMY+K G+++ A  VF K+ + +V
Sbjct: 209 VNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM--QIH 136
           VSW A + G + +G+ +  L L  QM SS + PN FTLS+ +KA     +    +  QIH
Sbjct: 269 VSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIH 328

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G  +K+  + +  +G +++DMY+K G +++A ++F+ +P K L+ WNA+I+G    G   
Sbjct: 329 GFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHG 388

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF +M++ G   +  T  + LK+  SL ++   TQ+H      GF  S   V+ G 
Sbjct: 389 ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF-LSDSHVVNG- 446

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KC CL  A +VF+     ++I+++S+I   +Q ++  +A++LF ++  + L+ D
Sbjct: 447 LIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPD 506

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            FVLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+
Sbjct: 507 PFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFS 566

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +P K VV+W+ +I G  +HG  K A+ +FR+M+ + + P+ +   +VL AC+H+GLV+E
Sbjct: 567 GLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDE 626

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           ++ YFS +     +    EHYSC++D LGRAG+LD+A  L+ SMP + + A+W  LL+A 
Sbjct: 627 AKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAAS 686

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RVH D ELG+   E L  L+ +    +V+++N +A AG W+E  ++RKL +   +KK   
Sbjct: 687 RVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPA 746

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWVE+   +H F  GD +HP    I+  L E+   M +  G+V  ++  LHD+ +  KE
Sbjct: 747 MSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKA-GYVPNLEVDLHDVDKSEKE 805

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSE+LA+  AL+    +   G  IRV KNLR+C DCH   K +SKI+    ++RD
Sbjct: 806 LLLSHHSERLAVAFALI----STPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRD 861

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSCGDYW
Sbjct: 862 INRFHHFSDGACSCGDYW 879



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 264/503 (52%), Gaps = 11/503 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML-ERNVVSWTALMCGFL 89
           GVQ+H   V  G S D+ + N L+ MY   G ++ A  VFD+   +RN VSW  +M  F+
Sbjct: 119 GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +N      + LF +M  S V+PNEF  S  + A      +E G ++H M +++G++ +  
Sbjct: 179 KNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVF 238

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             N+++DMYSK G I+ AA +F  +P   +++WNA I+G VL G+    L L  +M+  G
Sbjct: 239 TANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGT--QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            +P+ FT +S LKAC   G+       QIHGF+I +         I  +LVD Y K G L
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKAC--ADSDDYIGVALVDMYAKYGLL 356

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +AR+VF+ I +K ++ W++LI G +      E++ LF ++R+    ++   L++++   
Sbjct: 357 DDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKST 416

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A    +    Q+HA A K+    D+ V N ++D Y KC  +  A ++F E    N++ +T
Sbjct: 417 ASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFT 476

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +IT   +    ++A+ LF +ML   +EPD     ++L+AC+     E+ ++  + L   
Sbjct: 477 SMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 536

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           K M   +   + +V +  + G +++A      +P K  ++ W  ++     HG    G+ 
Sbjct: 537 KFMTD-VFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS-WSAMIGGLAQHGH---GKR 591

Query: 508 VGEILLRL-DGDNPVNYVMMSNI 529
             ++  R+ D     N++ ++++
Sbjct: 592 ALDVFRRMVDERIAPNHITLTSV 614



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 241/520 (46%), Gaps = 43/520 (8%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  L+K G        N L+  Y+KC     A  VFD+  +   VSW++L+  +  
Sbjct: 23  GAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSN 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  L+ F  M +  V+ NEF L   +K +        G+Q+H + + +G   +  V
Sbjct: 81  NALPREALAAFRAMRARGVRCNEFALPIVLKCA---PDAGLGVQVHAVAVSTGLSGDIFV 137

Query: 151 GNSIIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            N+++ MY   G ++EA R+FD     ++ ++WN M++ +V        + LF +M   G
Sbjct: 138 ANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSG 197

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+EF F+  + AC     +  G ++H  ++ +G+   V T  A +LVD Y K G +  
Sbjct: 198 VRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT--ANALVDMYSKLGDIHM 255

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM--GVF 327
           A  VF  + +  V+SW++ I G     +   A+EL  Q++   L  + F LSS++     
Sbjct: 256 AALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A       G+QIH +  K  +  D  +  ++VDMY K GL+D+A ++F  +P K+++ W 
Sbjct: 316 AGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWN 375

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL--- 444
            +I+G    G   E++ LF +M  +  + +     AVL + +    + ++ +  +     
Sbjct: 376 ALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI 435

Query: 445 ------------------CNDKRMKPRI--EH-------YSCIVDSLGRAGRLDEAKNLI 477
                             CN  R   ++  EH       ++ ++ +L +    ++A  L 
Sbjct: 436 GFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLF 495

Query: 478 ESMPVK---PSIAIWQTLLSACRVHGDLELGREVGEILLR 514
             M  K   P   +  +LL+AC      E G++V   L++
Sbjct: 496 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 535



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  LA  L+  +    +    Q+H    K+GF  D  + N LID Y KC  +  A  VF+
Sbjct: 406 RTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFE 465

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +    N++++T+++    Q  + +  + LF +M    ++P+ F LS+ + A   LS+ E 
Sbjct: 466 EHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQ 525

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+H   +K  F  +   GN+++  Y+KCG I +A   F  +P K +++W+AMI G   
Sbjct: 526 GKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQ 585

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
            G+  + L +FR+M +    P+  T TS L AC   G V
Sbjct: 586 HGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLV 624



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 14/299 (4%)

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  IH  L+ SG  ++ +      L+ FY KC     ARRVFD       +SWSSL+  Y
Sbjct: 23  GAHIHAHLLKSGLLHAFRN----HLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAY 78

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           +      EA+  FR +R R ++ + F L  ++    D  L   G Q+HA A       D 
Sbjct: 79  SNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDI 135

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            V+N++V MY   G +DEA  +F+E    +N V+W  +++ + K+    +AV LF +M+ 
Sbjct: 136 FVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVW 195

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V P+   +  V++AC+ S  +E  ++  + +      K  +   + +VD   + G + 
Sbjct: 196 SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD-VFTANALVDMYSKLGDIH 254

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV-NYVMMSNI 529
            A  +   +P K  +  W   +S C +HG     +   E+LL++     V N   +S+I
Sbjct: 255 MAALVFGKVP-KTDVVSWNAFISGCVLHGH---DQHALELLLQMKSSGLVPNVFTLSSI 309


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/684 (36%), Positives = 396/684 (57%), Gaps = 16/684 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           A +  C +  L    G  + G + K+GF   D+ +   LIDM+AK G++     VFD + 
Sbjct: 157 AATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLF 216

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER VV WT L+  + Q+G +   + LF  M  +  +P+++TLS+ + A   L S   G Q
Sbjct: 217 ERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQ 276

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGR---INEAARMFDVMPAKSLITWNAMIAGYVL 191
           +H + ++ G E +  V   ++DMY+K      ++ A  +F+ MP  +++ W A+++GYV 
Sbjct: 277 LHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQ 336

Query: 192 AGYSDKG-LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            G  D   ++LF KM   G  P+  T++S LKAC +LG    G QIH   + S    +  
Sbjct: 337 RGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNL--ADL 394

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            V+  +LV  Y + G + EAR  FD + +K+++S+S  + G  +     +      Q+  
Sbjct: 395 NVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIER 449

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L +  F   S++   A   ++ +G+++HA + K   G D ++ NS+V MY +CG + +
Sbjct: 450 MELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVD 509

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A ++F+EM   NV++WT +I+G  KHG A  A+ LF  M+   V+P+ V Y+AVLSACSH
Sbjct: 510 ACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSH 569

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLV+E +E+F  +     + PR+EHY+C+VD LGR+G +++A + I  MP +    +W+
Sbjct: 570 AGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWK 629

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           TLL AC+ H ++++G      +++L+  +P  YV++SN++A+AG W++  R+R L R K 
Sbjct: 630 TLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKN 689

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           L K  G SW+ VD  IH F  GD +HP  E+I+  L  + + +K  +G+V      LHD+
Sbjct: 690 LMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIK-VMGYVPDTSVVLHDM 748

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            +E KE  L  HSEK+A+   L+      +P   IR+FKNLRVC DCH  +K +SK    
Sbjct: 749 SDELKELCLLQHSEKIAVAFGLISCTSATKP---IRIFKNLRVCVDCHSALKYVSKATGR 805

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             ++RD+ RFHR + G CSCG+YW
Sbjct: 806 EIILRDSNRFHRMKDGECSCGEYW 829



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 234/453 (51%), Gaps = 22/453 (4%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNGAC 67
           ++  L+  L  C++      G QLH   +++G   D  ++  L+DMYAK      ++ A 
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR 313

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            VF++M + NV++WTAL+ G++Q G+     + LFC+M +  ++PN  T S+ +KA   L
Sbjct: 314 EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
              ++G QIH  C+KS      VVGN+++ MY++ G I EA   FD +  K++++++  +
Sbjct: 374 GDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNL 433

Query: 187 AGYVLAGYSDKGLLLFRKMQ-EHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
            G    G S+     ++  Q E  E+    FTF S + A  S+G +  G ++H   + +G
Sbjct: 434 DG---DGRSNT----YQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAG 486

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F       I  SLV  Y +CG LV+A +VFD +   +VISW+S+I G A+    A A+EL
Sbjct: 487 F--GSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALEL 544

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F  +    ++ +     +++   +   LV++GK+ H    +   GL   + +   +VD+ 
Sbjct: 545 FHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLL 603

Query: 363 LKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVA 420
            + GL+++A +  NEMP + + + W  ++     H      +G      +  +EP D   
Sbjct: 604 GRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHN--NMDIGEIAANHVIQLEPQDPAP 661

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
           Y+ + +  + +GL ++     S + +   MK +
Sbjct: 662 YVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEK 694



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 253/536 (47%), Gaps = 56/536 (10%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALMC 86
           G  L G L++ G     D ++ N L+ +Y+KC  +  A +VFD M    R++VSWTA+  
Sbjct: 66  GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA--SGVLSSVENGMQIHGMCMKSGF 144
              +NG     L LF +     + PN FTL    +A  +  L  +  G  + G+  K GF
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG-AVLGLVFKLGF 184

Query: 145 EWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
               V VG ++IDM++K G +    R+FD +  ++++ W  +I  Y  +GYSD+ + LF 
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            M E+G  PD++T +S L AC  LGS   G Q+H   +  G      + ++  LVD Y K
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGL--ESDSCVSCGLVDMYAK 302

Query: 264 C---GCLVEARRVFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQVDG 317
                 L  AR VF+ + + +V++W++L+ GY Q   ++N  + M LF ++    ++ + 
Sbjct: 303 SHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDN--QVMILFCKMLNEGIRPNH 360

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
              SSM+   A+    + G+QIH +  K        V N++V MY + G I+EA   F++
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQ 420

Query: 378 MPVKNVVTWTVIITGYGKHGL-----------------------AKEAVGLFRK------ 408
           +  KN+V+++  + G G+                          A  +VG+  K      
Sbjct: 421 LYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHA 480

Query: 409 -MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
             L      D     +++S  S  G + ++ + F  + ND      +  ++ ++  L + 
Sbjct: 481 LSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM-NDH----NVISWTSMISGLAKH 535

Query: 468 GRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           G    A  L   M    VKP+   +  +LSAC   G ++ G+E   ++ +  G  P
Sbjct: 536 GYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIP 591



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 196/392 (50%), Gaps = 11/392 (2%)

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
           G ++++P+E        A      +   +Q H +   S  E + VV NS++ +YSKC  +
Sbjct: 41  GQAALQPSEAAALLTAAARARDIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAV 100

Query: 165 NEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
             A  +FD MP   + L++W AM +     G   + L LF +  E G +P+ FT  +  +
Sbjct: 101 AAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQ 160

Query: 223 AC--GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           AC    L  + GG  + G +   GF +     +  +L+D + K G LV  RRVFD + ++
Sbjct: 161 ACFASELFHLAGGA-VLGLVFKLGF-WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFER 218

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
           +V+ W+ LI  YAQ     EA+ELF  + E   Q D + LSSM+    +      G+Q+H
Sbjct: 219 TVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLH 278

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           + A ++    D+ VS  +VDMY K      +  A E+FN MP  NV+ WT +++GY + G
Sbjct: 279 SLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRG 338

Query: 398 LAKEAVG-LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
                V  LF KML + + P+ + Y ++L AC++ G  +  ++  +  C    +      
Sbjct: 339 SQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTH-CVKSNLADLNVV 397

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
            + +V     +G ++EA++  + +  K  ++ 
Sbjct: 398 GNALVSMYAESGSIEEARHAFDQLYEKNMVSF 429


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/676 (35%), Positives = 385/676 (56%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L++G ++H  +V  GF  D  +   L+ MY K G M+ A  VFD +  R+V
Sbjct: 165 LDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDV 224

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            ++  ++ G+ ++G+ +    LF +M    +KPN+ +  + +       ++  G  +H  
Sbjct: 225 STFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQ 284

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           CM +G   +  V  S+I MY+ CG I  A R+FD M  + +++W  MI GY   G  +  
Sbjct: 285 CMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDA 344

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF  MQE G  PD  T+   + AC    ++    +IH  +  +GF      +++ +LV
Sbjct: 345 FGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGF--GTDLLVSTALV 402

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG + +AR+VFD + ++ V+SWS++I  Y +     EA E F  ++  +++ DG 
Sbjct: 403 HMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              +++        ++ G +I+  A K        + N+++ M  K G ++ A  +F+ M
Sbjct: 463 TYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM 522

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V+TW  +I GY  HG A+EA+ LF +ML +   P+ V ++ VLSACS +G V+E +
Sbjct: 523 VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGR 582

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F+ L   + + P ++ Y C+VD LGRAG LDEA+ LI+SMPVKP+ +IW +LL ACR+
Sbjct: 583 RFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRI 642

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+L++     E  L +D  +   YV +S+++A AG W    ++RK+  S+G++K  G +
Sbjct: 643 HGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCT 702

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV  ++H F   D +HPL  +I+  L  +   +K E G++   +  LHD+ E+ KEE+
Sbjct: 703 WIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKRE-GYIPITQNVLHDVGEQQKEEA 761

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           +  HSEKLAI      G L+   G  IR++KNLRVC DCH   K +SK+     + RDA+
Sbjct: 762 ISYHSEKLAIAY----GVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDAS 817

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ GVCSCGDYW
Sbjct: 818 RFHHFKDGVCSCGDYW 833



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 254/471 (53%), Gaps = 4/471 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+   +++ G   ++   N LI +Y+ CG +  A  +FD +  + VV+W AL+ G+ Q
Sbjct: 76  GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQ 135

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G+ K   +LF QM    ++P+  T  + + A    + +  G ++H   + +GF  +  +
Sbjct: 136 VGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRI 195

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G +++ MY K G +++A ++FD +  + + T+N M+ GY  +G  +K   LF +MQ+ G 
Sbjct: 196 GTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGL 255

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ +F S L  C +  ++  G  +H   + +G    ++  +A SL+  Y  CG +  A
Sbjct: 256 KPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR--VATSLIRMYTTCGSIEGA 313

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RRVFD ++ + V+SW+ +I GYA+  N+ +A  LF  ++E  +Q D      +M   A  
Sbjct: 314 RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAIS 373

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +   ++IH+       G D  VS ++V MY KCG I +A ++F+ MP ++VV+W+ +I
Sbjct: 374 ANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMI 433

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G   EA   F  M   ++EPDGV Y+ +L+AC H G ++   E +++      +
Sbjct: 434 GAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKAD-L 492

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
              +   + ++    + G ++ A+ + ++M V+  +  W  ++    +HG+
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGN 542


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/684 (36%), Positives = 385/684 (56%), Gaps = 44/684 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM- 104
           +L   N L+   A    ++   A+F  M +R++VS+ A++ GF   G+    + ++  + 
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 105 -GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--- 160
              SSV+P+  T+ST + A+  L     G Q H   ++ GF  N  VG+ ++DMY+K   
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190

Query: 161 ----------------------------CGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
                                       C  + EA R+F+VM  +  ITW  M+ G+   
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G   + L +FR+M+  G   D++TF S L ACG+L ++  G QIH ++I +   Y     
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT--RYDDNVF 308

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LVD Y KC  +  A  VF  +  K++ISW++LI+GY Q     EA+ +F +++   
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDE 370
           +  D + L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLA--LVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  LF+EM   + V+WT +++GY + G AKE + LF KML   V+PDGV ++ VLSACS 
Sbjct: 427 AHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSR 486

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +G VE+ + YF  +  D  + P  +HY+C++D   R+G+L EA+  I+ MP+ P    W 
Sbjct: 487 AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           TLLSACR+ GD+E+G+   E LL +D  NP +YV++ ++HA  G WNE  +LR+  R + 
Sbjct: 547 TLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQ 606

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G SW++   ++H F   D +HP ++ I++ L  +  +M EE G+   V   LHD+
Sbjct: 607 VKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEE-GYKPDVSSVLHDV 665

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            +  K   +  HSEKLAI   L+     E P   IR+ KNLRVC DCH   K +SKI   
Sbjct: 666 ADTDKVHMVSHHSEKLAIAFGLIFVP-QEMP---IRIVKNLRVCVDCHNATKFISKITGR 721

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRDA RFH+F  GVCSCGD+W
Sbjct: 722 DILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 204/398 (51%), Gaps = 41/398 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAK------------------------------- 59
           G Q H  ++++GF  +  + + L+DMYAK                               
Sbjct: 159 GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLR 218

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           C  +  A  +F+ M +R+ ++WT ++ GF QNG     L +F +M    +  +++T  + 
Sbjct: 219 CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A G LS++E G QIH   +++ ++ N  VG++++DMYSKC  I  A  +F  M  K++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           I+W A+I GY   G S++ + +F +MQ  G  PD++T  S + +C +L S+  G Q H  
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            + SG  + +   ++ +LV  Y KCG + +A R+FD +     +SW++L+ GYAQ     
Sbjct: 399 ALVSGLMHYI--TVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVS 355
           E ++LF ++  + ++ DG     ++   +    VE+G+       K    VP  +D   +
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP--IDDHYT 514

Query: 356 NSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
             ++D+Y + G + EA E   +MP+  + + W  +++ 
Sbjct: 515 -CMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 216/493 (43%), Gaps = 103/493 (20%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA------------------------ 187
           N ++  Y K GR   A R+FD MP  +L T+NA+++                        
Sbjct: 45  NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104

Query: 188 --GYVLAGYSDKG------LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHG 238
               V+AG+S  G       +    +Q    + P   T ++ + A  +LG    G Q H 
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVK-------------------------------CGCL 267
            ++  GF       +   LVD Y K                               C  +
Sbjct: 165 QILRLGF--GANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EARR+F+++  +  I+W++++ G+ Q    +EA+E+FR++R + + +D +   S++   
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              + +EQGKQIHAY  +     +  V +++VDMY KC  I  A  +F  M  KN+++WT
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF------ 441
            +I GYG++G ++EAV +F +M  D ++PD     +V+S+C++   +EE  ++       
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS 402

Query: 442 -------------------------SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
                                     RL ++     ++  ++ +V    + GR  E  +L
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALVSGYAQFGRAKETIDL 461

Query: 477 IESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN--YVMMSNIHA 531
            E M    VKP    +  +LSAC   G +E GR     + +  G  P++  Y  M ++++
Sbjct: 462 FEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYS 521

Query: 532 DAGSWNECERLRK 544
            +G   E E   K
Sbjct: 522 RSGKLKEAEEFIK 534



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 149/301 (49%), Gaps = 10/301 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G Q+H  +++  +  ++ + + L+DMY+KC  +  A  VF +M  +N+
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTAL+ G+ QNG ++  + +F +M    + P+++TL + I +   L+S+E G Q H +
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A+++GY   G + + 
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGF-PYSVKTVIAGS 256
           + LF KM   G  PD  TF   L AC   G V  G +  H      G  P          
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYT---C 515

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           ++D Y + G L EA      +      I W +L+        L   ME+ +   E  L++
Sbjct: 516 MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL----SACRLRGDMEIGKWAAENLLEI 571

Query: 316 D 316
           D
Sbjct: 572 D 572



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 167/413 (40%), Gaps = 78/413 (18%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I    P+   T +   L+  Y K G    ARRVFD +   ++ ++++L+   A    L+
Sbjct: 30  VILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLS 89

Query: 300 EAMELFRQLRERS---------------------------LQVDGFVLSSMMG----VFA 328
           +   LF  + +R                            LQ D  V  S +     V A
Sbjct: 90  DMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMA 149

Query: 329 DFALVEQ--GKQIHAYAAKVPSGLDTSVSNSIVDMY------------------------ 362
             AL ++  GKQ H    ++  G +  V + +VDMY                        
Sbjct: 150 ASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMY 209

Query: 363 -------LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
                  L+C +++EA  LF  M  ++ +TWT ++TG+ ++GL  EA+ +FR+M    + 
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIA 269

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
            D   + ++L+AC     +E+ ++  + +    R    +   S +VD   +   +  A+ 
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIR-TRYDDNVFVGSALVDMYSKCRSIKLAET 328

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH--ADA 533
           +   M  K +I  W  L+     +G  E    V   + R DG +P +Y + S I   A+ 
Sbjct: 329 VFRRMTCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQR-DGIDPDDYTLGSVISSCANL 386

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG----DDTHPLTEKI 582
            S  E  +   LA   GL       ++ V   +   YG     +D H L +++
Sbjct: 387 ASLEEGAQFHCLALVSGLMH-----YITVSNALVTLYGKCGSIEDAHRLFDEM 434



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 2/181 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+M 
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS 435

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M +  VKP+  T    + A      VE G  
Sbjct: 436 FHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRS 495

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLA 192
             H M    G          +ID+YS+ G++ EA      MP     I W  +++   L 
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555

Query: 193 G 193
           G
Sbjct: 556 G 556


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/664 (36%), Positives = 387/664 (58%), Gaps = 10/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+HG +VK+G+   LM+ N L+D Y K   +  AC +F  M E++ V++ AL+ G+ + G
Sbjct: 160 QVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEG 219

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                ++LF +M     +P+EFT +  + A   +  +E G Q+H   +K  F WN  V N
Sbjct: 220 FNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVAN 279

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++D YSK  RI EA ++F  MP    I++N +I      G  ++ L LFR++Q      
Sbjct: 280 ALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDR 339

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEAR 271
            +F F + L    +  ++  G QIH   I +    ++  V+ G SLVD Y KC    EA 
Sbjct: 340 RQFPFATLLSIAANSLNLEMGRQIHSQAIVTD---AISEVLVGNSLVDMYAKCDKFGEAN 396

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           R+F  +  +S + W++LI GY Q+    + ++LF ++    +  D    +S++   A+ A
Sbjct: 397 RIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLA 456

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  GKQ+H+   +     +    +++VDMY KCG I EA ++F EMPV+N V+W  +I+
Sbjct: 457 SLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALIS 516

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y ++G    A+  F +M+   ++P+ V++L++L ACSH GLVEE  +YF+ +    +++
Sbjct: 517 AYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLE 576

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           PR EHY+ +VD L R+GR DEA+ L+  MP +P   +W ++L++CR+H + EL  +  + 
Sbjct: 577 PRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQ 636

Query: 512 LLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           L  + G  +   YV MSNI+A AG W+   +++K  R +G++KV   SWVE+ ++ H F 
Sbjct: 637 LFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFS 696

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D +HP T++I + L E+EK+M EE G+      ALH++ EE K ESL+ HSE++AI  
Sbjct: 697 ANDTSHPQTKEITRKLDELEKQM-EEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAF 755

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL+    +   G  I V KNLR C DCH  IK +SKI+     VRD++RFH F  G CSC
Sbjct: 756 ALI----STPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSC 811

Query: 691 GDYW 694
            DYW
Sbjct: 812 KDYW 815



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 247/456 (54%), Gaps = 4/456 (0%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           +++  N +I  Y K G ++ A ++FD M++R+VV+WT L+ G+ Q+       +LF  M 
Sbjct: 72  NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              + P+  TL+T +       SV    Q+HG  +K G++   +V NS++D Y K   + 
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +F  M  K  +T+NA++ GY   G++   + LF KMQ+ G  P EFTF + L A  
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGI 251

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            +  +  G Q+H F++   F ++V   +A +L+DFY K   +VEAR++F  + +   IS+
Sbjct: 252 QMDDIEFGQQVHSFVVKCNFVWNV--FVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           + LI   A    + E++ELFR+L+        F  ++++ + A+   +E G+QIH+ A  
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
             +  +  V NS+VDMY KC    EA  +F ++  ++ V WT +I+GY + GL ++ + L
Sbjct: 370 TDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKL 429

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F +M    +  D   Y ++L AC++   +   ++  SR+     +   +   S +VD   
Sbjct: 430 FVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLS-NVFSGSALVDMYA 488

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           + G + EA  + + MPV+ S++ W  L+SA   +GD
Sbjct: 489 KCGSIKEALQMFQEMPVRNSVS-WNALISAYAQNGD 523



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 204/397 (51%), Gaps = 12/397 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +++G Q+H  +VK  F +++ + N L+D Y+K   +  A  +F +M E + +S+  L+  
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              NG  +  L LF ++  +     +F  +T +  +    ++E G QIH   + +     
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISE 375

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            +VGNS++DMY+KC +  EA R+F  +  +S + W A+I+GYV  G  + GL LF +M  
Sbjct: 376 VLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHR 435

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGC 266
                D  T+ S L+AC +L S+  G Q+H  +I SG    +  V +GS LVD Y KCG 
Sbjct: 436 AKIGADSATYASILRACANLASLTLGKQLHSRIIRSG---CLSNVFSGSALVDMYAKCGS 492

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           + EA ++F  +  ++ +SW++LI  YAQ  +   A+  F Q+    LQ +     S++  
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NV 383
            +   LVE+G Q      +V   L+    +  S+VDM  + G  DEA +L   MP + + 
Sbjct: 553 CSHCGLVEEGLQYFNSMTQV-YKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDE 611

Query: 384 VTWTVIITG---YGKHGLA-KEAVGLFRKMLLDDVEP 416
           + W+ I+     +    LA K A  LF    L D  P
Sbjct: 612 IMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAP 648



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 3/327 (0%)

Query: 4   VSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           + F+    RQ   A  L   + +L L+ G Q+H   +      ++++ N L+DMYAKC +
Sbjct: 332 LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDK 391

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
              A  +F  +  ++ V WTAL+ G++Q G  +  L LF +M  + +  +  T ++ ++A
Sbjct: 392 FGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRA 451

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              L+S+  G Q+H   ++SG   N   G++++DMY+KCG I EA +MF  MP ++ ++W
Sbjct: 452 CANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSW 511

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NA+I+ Y   G     L  F +M   G  P+  +F S L AC   G V  G Q    + T
Sbjct: 512 NALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSM-T 570

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEA 301
             +    +     S+VD   + G   EA ++   +  +   I WSS++      +N   A
Sbjct: 571 QVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELA 630

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFA 328
           ++   QL       D     SM  ++A
Sbjct: 631 IKAADQLFNMKGLRDAAPYVSMSNIYA 657



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 66/241 (27%)

Query: 340 HAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKN--------------- 382
           H  A+ + +G D +    N  V  +L+ G +  A +LF+EMP KN               
Sbjct: 28  HVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSG 87

Query: 383 ----------------VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                           VVTWT++I GY +H    EA  LF  M    + PD +    +LS
Sbjct: 88  NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLS 147

Query: 427 -----------ACSHSGLVEESQEYFSRLCN---DKRMKPR--------IEH-------- 456
                      A  H  +V+   +    +CN   D   K R         +H        
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207

Query: 457 YSCIVDSLGRAGRLDEAKNL---IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           ++ ++    + G   +A NL   ++ +  +PS   +  +L+A     D+E G++V   ++
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267

Query: 514 R 514
           +
Sbjct: 268 K 268


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/670 (38%), Positives = 399/670 (59%), Gaps = 13/670 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +++ GVQ+H  +VK GF F   + N LI MY K   +  A AVFD M+ R+ V+W  ++ 
Sbjct: 220 IIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+   G       +F +M  + VK +     T +K       +    Q+H   +K+G+E+
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
              +  +++  YSKC  ++EA ++F +   A +++TW AMI G+V    ++K + LF +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQM 399

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G  P+ FT+++ L   G   S+   +Q+H  +I +   Y     +A +L+D YVK G
Sbjct: 400 SREGVRPNHFTYSTVL--AGKPSSLL--SQLHAQIIKA--YYEKVPSVATALLDAYVKTG 453

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +VE+ RVF  I  K +++WS+++ G AQ  +  +AME+F QL +  ++ + +  SS++ 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 326 V-FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              +  A VE GKQIHA A K        VS++++ MY K G I+ A ++F     +++V
Sbjct: 514 ACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +ITGYG+HG AK+A+ +F+ M    +  D V ++ VL+AC+H+GLVEE ++YF+ +
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D  +  +IEHYSC+VD   RAG  D+A ++I  MP   S  IW+TLL+ACRVH +LEL
Sbjct: 634 IKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLEL 693

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G+   E L+ L  ++ V YV++SNIHA AG+W E   +RKL   + +KK AG SW+E+  
Sbjct: 694 GKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKN 753

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            I  F  GD +HP ++ ++  L E+  ++K ++G+     Y  HD++EE KE  L  HSE
Sbjct: 754 RIFSFLAGDVSHPFSDLVYAKLEELSIKLK-DMGYQPDTNYVFHDVEEEHKEAILSQHSE 812

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LAI   L+       PG  I++ KNLR+CGDCH  I+ +S I +   +VRD+ RFH F+
Sbjct: 813 RLAIAYGLIA----LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFK 868

Query: 685 GGVCSCGDYW 694
           GGVCSCG YW
Sbjct: 869 GGVCSCGGYW 878



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 261/502 (51%), Gaps = 14/502 (2%)

Query: 15  LADSLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           L+ +L+ C   +L D   G Q+H   +K GF  D+ +   L+DMY K  +      +FD+
Sbjct: 107 LSCALKVCG--VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDE 164

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M  +NVVSWT+L+ G+ +NG     + L  QM    V PN FT +T + A    S +E G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           +Q+H M +K+GFE+   V N++I MY K   + +A  +FD M  +  +TWN MI GY   
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G+  +G  +F +M+  G       F + LK C     +    Q+H  ++ +G+ ++    
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD-- 342

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           I  +L+  Y KC  + EA ++F + +   +V++W+++I G+ Q  N  +A++LF Q+   
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE 402

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
            ++ + F  S+++       L +   Q I AY  KVP     SV+ +++D Y+K G + E
Sbjct: 403 GVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP-----SVATALLDAYVKTGNVVE 457

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           +  +F  +P K++V W+ ++TG  +   +++A+ +F +++ + V+P+   + +V++ACS 
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           S    E  +              +   S ++    + G ++ A+ +      +  I  W 
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWN 576

Query: 491 TLLSACRVHGDLELGREVGEIL 512
           ++++    HGD +   EV +I+
Sbjct: 577 SMITGYGQHGDAKKALEVFQIM 598



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 239/485 (49%), Gaps = 18/485 (3%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+   +++  +  L+  F +N + +  L LF  + SS +  +  TLS  +K  GV
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L     G Q+H   +KSGF  +  VG S++DMY K     +   +FD M  K++++W ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           ++GY   G +D+ + L  +MQ  G  P+ FTF + L A      + GG Q+H  ++ +GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            ++  T +  +L+  Y+K   + +A  VFD +  +  ++W+ +I GYA      E  ++F
Sbjct: 237 EFT--TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R   +++   V  + + + +    +   KQ+H    K        +  +++  Y KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354

Query: 366 GLIDEATELFNEM-PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             +DEA +LF+      NVVTWT +I G+ ++   ++AV LF +M  + V P+   Y  V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 425 LSACSHSGLVEESQE----YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           L+    S L +   +    Y+ ++       P +   + ++D+  + G + E+  +  S+
Sbjct: 415 LAGKPSSLLSQLHAQIIKAYYEKV-------PSVA--TALLDAYVKTGNVVESARVFYSI 465

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P K  +A W  +L+      D E   EV  I L  +G  P  Y   S I+A + S    E
Sbjct: 466 PAKDIVA-WSAMLTGLAQTRDSEKAMEVF-IQLVKEGVKPNEYTFSSVINACSSSAATVE 523

Query: 541 RLRKL 545
             +++
Sbjct: 524 HGKQI 528



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 2/170 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C S    +++G Q+H   VK G S  L +++ L+ MY+K G +  A  VF +  ER++VS
Sbjct: 515 CSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVS 574

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W +++ G+ Q+G+AK  L +F  M +  +  ++ T    + A      VE G +   + +
Sbjct: 575 WNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMI 634

Query: 141 KSGFEWNPVVGNS-IIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
           K       +   S ++D+YS+ G  ++A  + + MP   S   W  ++A 
Sbjct: 635 KDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA 684


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/678 (36%), Positives = 388/678 (57%), Gaps = 43/678 (6%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV- 109
           N ++  Y+K G+++    +F  M  R+ VSW +L+ G++  G+    +  +  M    V 
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             N  T ST +        V+ G QIHG  +K GF     VG+S++DMY+K G ++ A++
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 170 MFDV-------------------------------MPAKSLITWNAMIAGYVLAGYSDKG 198
           +FD                                M  +  I+W  MI G +  G   + 
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR M++ G   D++TF S L ACG L ++  G +IH  +I SG+ ++V   +  +LV
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV--FVGSALV 312

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A  VF  +  K+V+SW+++++GY Q     EA+ +F  ++   ++ D F
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFN 376
            L S++   A+ A +E+G Q H  A  + SGL +  +VSN+++ +Y KCG I+++ +LF+
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQA--LVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM  ++ V+WT +++GY + G A E + LF +ML+  ++PD V ++AVLSACS +GLVE 
Sbjct: 431 EMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            Q+YF  +  D  + P  +HY+C++D  GRAGRL+EAKN I  MP  P    W TLLS+C
Sbjct: 491 GQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R++G+ E+G+   E LL LD  NP  Y+++S+I+A  G W+   +LR+  R KG +K  G
Sbjct: 551 RLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPG 610

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW++   +++ F   D + P +++I+  L ++  +M EE G+V      LHD+++  K 
Sbjct: 611 FSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEE-GYVPDASSVLHDVEDSEKM 669

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + L  HSEKLAI   L    L    G  IRV KNLRVCGDCH   K +SKI +   +VRD
Sbjct: 670 KMLNHHSEKLAIAFGL----LFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRD 725

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH F+ G CSCGD+W
Sbjct: 726 AVRFHLFKDGTCSCGDFW 743



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 235/460 (51%), Gaps = 46/460 (10%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR++FS +         L   S    +D G Q+HG +VK GF   + + + L+DMYAK 
Sbjct: 136 LNRITFSTM---------LLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKM 186

Query: 61  GEMNGACAVFDKMLERNVV-------------------------------SWTALMCGFL 89
           G ++ A  VFD++ ERNVV                               SWT ++ G +
Sbjct: 187 GLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLI 246

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG     + LF  M    +  +++T  + + A G L +++ G +IH + ++SG+  N  
Sbjct: 247 QNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVF 306

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG++++DMY KC  +  A  +F  M  K++++W AM+ GY   G+S++ + +F  MQ +G
Sbjct: 307 VGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG 366

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+FT  S + +C +L S+  G Q H   + SG    +   ++ +L+  Y KCG + +
Sbjct: 367 IEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFI--TVSNALITLYGKCGSIED 424

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + ++FD +  +  +SW++L+ GYAQ     E ++LF ++  + L+ D     +++   + 
Sbjct: 425 SNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSR 484

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
             LVE+G+Q      K    +  S   + ++D++ + G ++EA    N+MP   + + W 
Sbjct: 485 AGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWA 544

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            +++    +G   E +G +    L +++P   A   +LS+
Sbjct: 545 TLLSSCRLYG--NEEIGKWAAESLLELDPQNPAGYILLSS 582



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           Q K++H    K  +  +T + N++++ Y K G I  A  +F++MP  N  +W  +++ Y 
Sbjct: 23  QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           K G       +F  M       DGV++ +++S     G V E+ + ++ +  D
Sbjct: 83  KSGDLSTMQEIFSIM----PNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 10/125 (8%)

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P    Y+ ++++  + G +  A+++ + MP +P+   W T+LSA    GDL   +E+  I
Sbjct: 38  PETFLYNNLINAYSKLGNITYARHVFDKMP-QPNSFSWNTMLSAYSKSGDLSTMQEIFSI 96

Query: 512 LLRLDGDN----PVNYVMMSNIHADAGSWNECER-----LRKLARSKGLKKVAGRSWVEV 562
           +   DG +       YV   ++     ++N   +     L ++  S  L  V+ +  V++
Sbjct: 97  MPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDL 156

Query: 563 DKEIH 567
            ++IH
Sbjct: 157 GRQIH 161


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/660 (36%), Positives = 383/660 (58%), Gaps = 22/660 (3%)

Query: 40  KMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           KMG +  D+ + + LIDM A+ G++  A  VFD ++E+ VV WT L+  ++Q   A+  +
Sbjct: 180 KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            LF        +P+ +T+S+ I A   L SV  G+Q+H + ++ G   +  V   ++DMY
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299

Query: 159 SKCG---RINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKMQEHGEIPDE 214
           +K      ++ A ++F+ MP   +I+W A+I+GYV +G   +K + LF +M      P+ 
Sbjct: 300 AKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNH 359

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T++S LK+C S+     G Q+H  +I S    +    +  +LV  Y + GC+ EARRVF
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSN--QASAHTVGNALVSMYAESGCMEEARRVF 417

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           + + ++S+I   +                L  ++    + +     +S++   A   ++ 
Sbjct: 418 NQLYERSMIPCIT----------EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLT 467

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +G+Q+HA + K   G D  VSNS+V MY +CG +++A   FNE+  +NV++WT +I+G  
Sbjct: 468 KGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA 527

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           KHG A+ A+ LF  M+L  V+P+ V Y+AVLSACSH GLV E +EYF  +  D  + PR+
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY+C+VD L R+G + EA   I  MP+K    +W+TLL ACR H ++E+G    + ++ 
Sbjct: 588 EHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVE 647

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           L+  +P  YV++SN++ADAG W+E  R+R   R   L K  G SW+EV+   H F  GD 
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
           +HP  + I+  L  + +++K  +G+V      LHD+ +E KE+ L  HSEK+A+   L+ 
Sbjct: 708 SHPRAQDIYGKLDTLVRQIK-GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLI- 765

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
                   K IR+FKNLRVC DCH  IK +SK  +   ++RD+ RFHR + G CSCG+YW
Sbjct: 766 ---TTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 225/434 (51%), Gaps = 23/434 (5%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG---EMNGAC 67
           +R  ++  +  C++   +  G+QLH   ++MG + D  ++  L+DMYAK      M+ A 
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYAN 312

Query: 68  AVFDKMLERNVVSWTALMCGFLQNG-NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            VF++M + +V+SWTAL+ G++Q+G      ++LF +M + S+KPN  T S+ +K+   +
Sbjct: 313 KVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASI 372

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           S  ++G Q+H   +KS       VGN+++ MY++ G + EA R+F+ +  +S+I    + 
Sbjct: 373 SDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP--CIT 430

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G        +   L  ++          TF S + A  S+G +  G Q+H   + +GF 
Sbjct: 431 EG--------RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGF- 481

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                 ++ SLV  Y +CG L +A R F+ ++ ++VISW+S+I G A+      A+ LF 
Sbjct: 482 -GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFH 540

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
            +    ++ +     +++   +   LV +GK+ +  + +   GL   + +   +VD+  +
Sbjct: 541 DMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDHGLIPRMEHYACMVDLLAR 599

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYL 422
            G++ EA E  NEMP+K + + W  ++     H   +  VG      + ++EP D   Y+
Sbjct: 600 SGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIE--VGEITAKNVVELEPRDPAPYV 657

Query: 423 AVLSACSHSGLVEE 436
            + +  + +GL +E
Sbjct: 658 LLSNLYADAGLWDE 671



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 256/550 (46%), Gaps = 55/550 (10%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALM 85
           L  G  LH  L++      D ++ N L+ +Y++CG +  A  VFD M   R++VSWTA+ 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS-----GVLSSVENGMQIHGMCM 140
               +NG  +  L L  +M  S + PN +TL     A        L        +H M +
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
              +  +  VG+++IDM ++ G +  A ++FD +  K+++ W  +I+ YV    +++ + 
Sbjct: 184 ---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF    E G  PD +T +S + AC  LGSV  G Q+H   +  G   +    ++  LVD 
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGL--ASDACVSCGLVDM 298

Query: 261 YVKCG---CLVEARRVFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQ 314
           Y K      +  A +VF+ + +  VISW++LI GY Q   +EN  + M LF ++   S++
Sbjct: 299 YAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQEN--KVMALFGEMLNESIK 356

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +    SS++   A  +  + G+Q+HA+  K       +V N++V MY + G ++EA  +
Sbjct: 357 PNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRV 416

Query: 375 FNEMPVKNVV-------------------------TWTVIITGYGKHGLAKEAVGLFRKM 409
           FN++  ++++                         T+  +I+     G+  +   L    
Sbjct: 417 FNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMS 476

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
           L      D     +++S  S  G +E++   F+ L  D+     +  ++ ++  L + G 
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL-KDR----NVISWTSMISGLAKHGY 531

Query: 470 LDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NYV 524
            + A +L   M    VKP+   +  +LSAC   G +  G+E    + R  G  P   +Y 
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591

Query: 525 MMSNIHADAG 534
            M ++ A +G
Sbjct: 592 CMVDLLARSG 601


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/732 (36%), Positives = 410/732 (56%), Gaps = 68/732 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +      G  +H  +   GF +++ + N L+ MY +CG    A  VFD+M ER V
Sbjct: 152 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 211

Query: 79  ---VSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQ 134
              VSW +++  ++Q G++   + +F +M     ++P+  +L   + A   + +   G Q
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
           +HG  ++SG   +  VGN+++DMY+KCG + EA ++F+ M  K +++WNAM+ GY     
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331

Query: 190 -------------------------VLAGYSDKGL-----LLFRKMQEHGEIPDEFTFTS 219
                                    V+AGY+ +GL      +FR+M   G  P+  T  S
Sbjct: 332 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVS 391

Query: 220 TLKACGSLGSVGGGTQIHGFLIT------SGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            L  C S G++  G + H   I          P     VI  +L+D Y KC     AR +
Sbjct: 392 LLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVI-NALIDMYSKCKSPKAARAM 450

Query: 274 FDLIEQK--SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF---- 327
           FDLI  K  SV++W+ LI G AQ     EA+ELF Q+    LQ D FV+ +   +     
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM----LQPDNFVMPNAFTISCALM 506

Query: 328 --ADFALVEQGKQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELFNEMPVKN 382
             A    +  G+QIHAY  +  +  +++   V+N ++DMY K G +D A  +F+ M  +N
Sbjct: 507 ACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 564

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V+WT ++TGYG HG  +EA+ +F +M    + PDGV ++ VL ACSHSG+V++   YF+
Sbjct: 565 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFN 624

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  D  + P  EHY+C+VD L RAGRLDEA  LI  MP+KP+ A+W  LLSACRV+ ++
Sbjct: 625 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 684

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ELG      LL L+  N  +Y ++SNI+A+A  W +  R+R L ++ G+KK  G SWV+ 
Sbjct: 685 ELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 744

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
            K    F+ GD +HP++++I+ +L ++ +R+K  LG+V   ++ALHD+ +E K + L  H
Sbjct: 745 RKGTATFFAGDWSHPMSQQIYDLLRDLMQRIK-ALGYVPDNRFALHDVDDEEKGDLLSEH 803

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SEK    LAL  G L   PG  IR+ KNLR CGDCH     +S I++   +VRD++RFH 
Sbjct: 804 SEK----LALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHH 859

Query: 683 FEGGVCSCGDYW 694
           F+ G CSC  YW
Sbjct: 860 FKNGSCSCRGYW 871



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 261/539 (48%), Gaps = 62/539 (11%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGFLQNG 92
           H  L+  G   D      +I MY        A +V  ++      V  W  L+   +  G
Sbjct: 68  HQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 124

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  L L+ +M     +P+ +T    +KA G + S   G  +H +   SGFEWN  VGN
Sbjct: 125 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 184

Query: 153 SIIDMYSKCGRINEAARMFDVMPAK---SLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
            ++ MY +CG    A ++FD M  +    L++WN+++A Y+  G S + + +F +M E  
Sbjct: 185 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 244

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  PD  +  + L AC S+G+   G Q+HG+ + SG    V   +  ++VD Y KCG + 
Sbjct: 245 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV--FVGNAVVDMYAKCGMME 302

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA +VF+ ++ K V+SW++++ GY+Q     +A+ LF ++RE  ++++    S+++  +A
Sbjct: 303 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 362

Query: 329 DFAL-----------------------------------VEQGKQIHAYAAKVPSGLDTS 353
              L                                   +  GK+ H +A K    LD +
Sbjct: 363 QRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422

Query: 354 -------VSNSIVDMYLKCGLIDEATELFNEMPVKN--VVTWTVIITGYGKHGLAKEAVG 404
                  V N+++DMY KC     A  +F+ +P K+  VVTWTV+I G  +HG A EA+ 
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482

Query: 405 LFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           LF +ML  D  V P+       L AC+  G +   ++  + +  ++     +   +C++D
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLDG 517
              ++G +D A+ + ++M  +  ++ W +L++   +HG     L++  E+ ++ L  DG
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDG 600



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 204/429 (47%), Gaps = 55/429 (12%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
           L + L  C+       G Q+HG  ++ G   D+ + N ++DMYAKCG M  A  VF++M 
Sbjct: 253 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 312

Query: 74  ----------------------------------LERNVVSWTALMCGFLQNGNAKACLS 99
                                             +E NVV+W+A++ G+ Q G     L 
Sbjct: 313 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 372

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF---EWNP----VVGN 152
           +F QM     +PN  TL + +       ++ +G + H   +K      E +P    +V N
Sbjct: 373 VFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 432

Query: 153 SIIDMYSKCGRINEAARMFDVMPAK--SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           ++IDMYSKC     A  MFD++P K  S++TW  +I G    G +++ L LF +M +   
Sbjct: 433 ALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDN 492

Query: 211 --IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             +P+ FT +  L AC  LG++  G QIH +++ + F  S    +A  L+D Y K G + 
Sbjct: 493 FVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE-SAMLFVANCLIDMYSKSGDVD 551

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            AR VFD + Q++ +SW+SL+ GY       EA+++F ++++  L  DG     ++   +
Sbjct: 552 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACS 611

Query: 329 DFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV- 383
              +V+QG        K    VP     +    +VD+  + G +DEA EL   MP+K   
Sbjct: 612 HSGMVDQGINYFNGMNKDFGVVPGAEHYAC---MVDLLSRAGRLDEAMELIRGMPMKPTP 668

Query: 384 VTWTVIITG 392
             W  +++ 
Sbjct: 669 AVWVALLSA 677


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/726 (35%), Positives = 411/726 (56%), Gaps = 55/726 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
            + C+    L  G  LH  + + GF+ ++ + N ++ MY KCG +  A  +FD +  R  
Sbjct: 266 FKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI 325

Query: 77  -NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VSW +++  ++   +A   L+LF +M +  +  P+  +L   + A   L++   G Q
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
           +HG  ++SG   +  VGN+++DMY+KCG++ EA ++F  M  K +++WNAM+ GY     
Sbjct: 386 VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGR 445

Query: 190 -------------------------VLAGYSDKG-----LLLFRKMQEHGEIPDEFTFTS 219
                                    V+ GY+ +G     L +FR+M + G  P+  T  S
Sbjct: 446 LEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVS 505

Query: 220 TLKACGSLGSVGGGTQIHGFLIT------SGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            L AC S+G++  G + H + I          P +    +   L+D Y KC     AR++
Sbjct: 506 LLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565

Query: 274 FDLIEQKS--VISWSSLILGYAQEENLAEAMELFRQL--RERSLQVDGFVLSSMMGVFAD 329
           FD +  K   V++W+ +I GYAQ  +   A++LF  +   ++S++ + F LS  +   A 
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625

Query: 330 FALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            A +  G+Q+HAY  +   G +   V+N ++DMY K G +D A  +F+ MP +N V+WT 
Sbjct: 626 LAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTS 685

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++TGYG HG  ++A+ +F +M    + PDG+ +L VL ACSHSG+V+    +F+R+  D 
Sbjct: 686 LMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDF 745

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P  EHY+C+VD  GRAGRL EA  LI  MP++P+  +W  LLSACR+H ++ELG   
Sbjct: 746 GVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFA 805

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
              LL L+  N  +Y ++SNI+A+A  W +  R+R   +  G+KK  G SW++  K +  
Sbjct: 806 ANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVAT 865

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           FY GD +HP +++I++ L ++ +R+K  +G+V    +ALHD+ +E K + L  HSEK   
Sbjct: 866 FYVGDRSHPQSQQIYETLADLIQRIK-AIGYVPQTSFALHDVDDEEKGDLLFEHSEK--- 921

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
            LAL  G L   P   IR+ KNLR+CGDCH  I  +SKI++   ++RD++RFH F+ G C
Sbjct: 922 -LALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSC 980

Query: 689 SCGDYW 694
           SC  YW
Sbjct: 981 SCKGYW 986



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 255/541 (47%), Gaps = 62/541 (11%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER--NVVSWTALMCGFLQN 91
           LH   +  G  F L  N  LI  Y        A  + +++     +V  W  L+   L  
Sbjct: 180 LHQQSIMQGLLFHLATN--LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHL 237

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G+ +   +L+ QM S    P+ +T     KA   LSS+  G  +H    +SGF  N  V 
Sbjct: 238 GSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVC 297

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAK---SLITWNAMIAGYVLAGYSDKGLLLFRKM-QE 207
           N+++ MY KCG +  A  MFD +  +    L++WN++++ Y+ A  ++  L LF KM   
Sbjct: 298 NAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTR 357

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           H   PD  +  + L AC SL +   G Q+HGF I SG    V   +  ++VD Y KCG +
Sbjct: 358 HLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV--FVGNAVVDMYAKCGKM 415

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD---------GF 318
            EA +VF  ++ K V+SW++++ GY+Q   L  A+ LF ++ E ++++D         G+
Sbjct: 416 EEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGY 475

Query: 319 --------------------------VLSSMMGVFADFALVEQGKQIHAYAAKV------ 346
                                      L S++        +  GK+ H YA K       
Sbjct: 476 AQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDG 535

Query: 347 --PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKHGLAKEA 402
             P   D  V N ++DMY KC   + A ++F+ +  K  +VVTWTV+I GY +HG A  A
Sbjct: 536 PDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNA 595

Query: 403 VGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           + LF  M   D  ++P+       L AC+    +   ++  + +  +      +   +C+
Sbjct: 596 LQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCL 655

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
           +D   ++G +D A+ + ++MP + +++ W +L++   +HG     L +  E+ ++ L  D
Sbjct: 656 IDMYSKSGDVDTAQIVFDNMPQRNAVS-WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPD 714

Query: 517 G 517
           G
Sbjct: 715 G 715



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 126/294 (42%), Gaps = 21/294 (7%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           + LK C SL        +H   I  G  + + T + G+ +        ++   R+     
Sbjct: 166 TALKECNSLAH---AKLLHQQSIMQGLLFHLATNLIGTYIASNSTAYAILLLERLPP--S 220

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
             SV  W+ LI       +  +   L+RQ++      D +    +    A+ + +  G  
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM---PVKNVVTWTVIITGYGK 395
           +HA  ++     +  V N++V MY KCG +  A  +F+++    ++++V+W  +++ Y  
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340

Query: 396 HGLAKEAVGLFRKMLLDDV-EPDGVAYLAVLSACSHSGLVEESQEYF-----SRLCNDKR 449
              A  A+ LF KM    +  PD ++ + +L AC+        ++       S L +D  
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF 400

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +       + +VD   + G+++EA  + + M  K  ++ W  +++     G LE
Sbjct: 401 VG------NAVVDMYAKCGKMEEANKVFQRMKFKDVVS-WNAMVTGYSQAGRLE 447


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/663 (36%), Positives = 380/663 (57%), Gaps = 11/663 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH   +K G    + + N L+D Y K G +  A  VF +M +++ V++ A+M G  + G 
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF  M  + +    FT S+ +  +  ++ +  G Q+H + ++S    N  V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++D YSKC  +++  R+FD MP +  +++N +IA Y     +   L LFR+MQ+ G    
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
              + + L   GSL  V  G QIH  L+  G   + + ++  +L+D Y KCG L  A+  
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL--ASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F    +KS ISW++LI GY Q     EA++LF  +R   L+ D    SS++   +  A++
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI 454

Query: 334 EQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             G+Q+H+Y  +  SG  +SV   + +VDMY KCG +DEA   F+EMP +N ++W  +I+
Sbjct: 455 GLGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y  +G AK A+ +F  ML     PD V +L+VL+ACSH+GL +E  +YF  + +   + 
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  EHY+C++D+LGR G   + + ++  MP K    IW ++L +CR+HG+ EL R   + 
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L  ++  +   YV++SNI+A AG W +   ++K+ R +G++K +G SWVE+ ++I+ F  
Sbjct: 633 LFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFAS 692

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
            D T P+ ++I   L  + K M ++ G+   +  ALH +  E K ESL+ HSE+LAI  A
Sbjct: 693 NDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITCALHMVDHELKLESLKYHSERLAIAFA 751

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L    +N   G  IR+ KNL  C DCH  IK +SKI+    +VRD+ RFH F+ GVCSCG
Sbjct: 752 L----MNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCG 807

Query: 692 DYW 694
           DYW
Sbjct: 808 DYW 810



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 247/509 (48%), Gaps = 17/509 (3%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FS +L+L+      Y+  G++  A  +F     RN  +WT +M      G     LSLF 
Sbjct: 75  FSLNLILS-----AYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            M    V P+  T++T +   G          +H   +K G + +  V N+++D Y K G
Sbjct: 130 AMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            +  A R+F  M  K  +T+NAM+ G    G   + L LF  M+  G     FTF+S L 
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
               +  +  G Q+H  ++ S    +V   +  SL+DFY KC CL + RR+FD + ++  
Sbjct: 245 VAAGMAHLLLGHQVHALVLRSTSVLNV--FVNNSLLDFYSKCDCLDDMRRLFDEMPERDN 302

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +S++ +I  YA  +  A  + LFR++++          ++M+ V      V  GKQIHA 
Sbjct: 303 VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQ 362

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
              +    +  + N+++DMY KCG++D A   F+    K+ ++WT +ITGY ++G  +EA
Sbjct: 363 LVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEA 422

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF  M    + PD   + +++ A S   ++   ++  S L      K  +   S +VD
Sbjct: 423 LQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG-YKSSVFSGSVLVD 481

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
              + G LDEA    + MP + SI+ W  ++SA   +G+ +   ++ E +L   G NP +
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHC-GFNPDS 539

Query: 523 YVMMSNIHA--DAGSWNECERLRKLARSK 549
              +S + A    G  +EC +   L + +
Sbjct: 540 VTFLSVLAACSHNGLADECMKYFHLMKHQ 568



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 196/398 (49%), Gaps = 11/398 (2%)

Query: 25  NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTAL 84
           +LLL  G Q+H  +++     ++ +NN L+D Y+KC  ++    +FD+M ER+ VS+  +
Sbjct: 251 HLLL--GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           +  +  N  A   L LF +M            +T +  +G L  V  G QIH   +  G 
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
               ++GN++IDMYSKCG ++ A   F     KS I+W A+I GYV  G  ++ L LF  
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVK 263
           M+  G  PD  TF+S +KA  SL  +G G Q+H +LI SG+  S   V +GS LVD Y K
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS---VFSGSVLVDMYAK 485

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CGCL EA R FD + +++ ISW+++I  YA       A+++F  +       D     S+
Sbjct: 486 CGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSV 545

Query: 324 MGVFADFALVEQ-GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK- 381
           +   +   L ++  K  H    +            ++D   + G   +  ++  EMP K 
Sbjct: 546 LAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605

Query: 382 NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVEP 416
           + + WT I+     +G   LA+ A      M   D  P
Sbjct: 606 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATP 643



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  +R   +  ++  S   ++  G QLH  L++ G+   +   + L+DMYAKCG ++ A 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
             FD+M ERN +SW A++  +   G AK  + +F  M      P+  T  + + A     
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
             +  M+   + MK  +  +P   +   +ID   + G  ++  +M   MP K+  I W +
Sbjct: 554 LADECMKYFHL-MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612

Query: 185 MI 186
           ++
Sbjct: 613 IL 614


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/660 (36%), Positives = 392/660 (59%), Gaps = 8/660 (1%)

Query: 33   QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            ++HG ++K+GF  +  + N LI  Y K G +  A  +FD++ E +VVSW +++ G + NG
Sbjct: 491  RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550

Query: 93   NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +   L +F QM    V+ +  TL + + A   + ++  G  +HG  +K+ F    V  N
Sbjct: 551  FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610

Query: 153  SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +++DMYSKCG +N A  +F  M   ++++W + IA YV  G     + LF +MQ  G  P
Sbjct: 611  TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 213  DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            D +T TS + AC    S+  G  +H ++I +G   ++   +  +L++ Y KCG + EAR 
Sbjct: 671  DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP--VTNALINMYAKCGSVEEARL 728

Query: 273  VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            VF  I  K ++SW+++I GY+Q     EA+ELF  + ++  + D   ++ ++   A  A 
Sbjct: 729  VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAA 787

Query: 333  VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            +++G++IH +  +     D  V+ ++VDMY KCGL+  A  LF+ +P K++++WTV+I G
Sbjct: 788  LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847

Query: 393  YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
            YG HG   EA+  F +M +  +EPD  ++  +L+ACSHSGL+ E  ++F+ + N+  ++P
Sbjct: 848  YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEP 907

Query: 453  RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++EHY+C+VD L R G L +A   IESMP+KP   IW  LLS CR+H D++L  +V E +
Sbjct: 908  KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI 967

Query: 513  LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
              L+ DN   YV+++N++A+A  W E ++LRK  + +G K+  G SW+EV  + + F  G
Sbjct: 968  FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 1027

Query: 573  DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
            +  HP  ++I  +L ++  +M+ E  F    +Y L +  +  KE     HSEK A+    
Sbjct: 1028 NSKHPQAKRIDVLLRKLTMQMQNEDYFSM-FRYVLINEDDMEKEMIQCGHSEKSAMAF-- 1084

Query: 633  VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
              G LN  PG+ +RV KN RVCGDCHE  K +SK  K   V+RD+ RFH F+ G+CSC D
Sbjct: 1085 --GILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 281/534 (52%), Gaps = 32/534 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L+ G ++H  ++  G S D  L   L+ MY  CG++     +FDK++   V
Sbjct: 376 LQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKV 435

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  LM  + + GN +  +SLF +M    V  N +T +  +K    L  V+   ++HG 
Sbjct: 436 FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGY 495

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  N  V NS+I  Y K G +  A  +FD +    +++WN+MI G V+ G+S  G
Sbjct: 496 VLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNG 555

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F +M   G   D  T  S L A  ++G++  G  +HGF + + F  S + V + +L+
Sbjct: 556 LEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACF--SEEVVFSNTLL 613

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L  A  VF  +   +++SW+S I  Y +E   ++A+ LF +++ + ++ D +
Sbjct: 614 DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  + +++G+ +H+Y  K   G +  V+N++++MY KCG ++EA  +F+++
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           PVK++V+W  +I GY ++ L  EA+ LF  M     +PD +    VL AC+    +++ +
Sbjct: 734 PVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGR 792

Query: 439 E---------YFSRLCNDKRMKPRIEHYSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           E         YFS L           H +C +VD   + G L  A+ L + +P K  I+ 
Sbjct: 793 EIHGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS- 840

Query: 489 WQTLLSACRVHGDLELGREVGEIL--LRLDGDNP--VNYVMMSNIHADAGSWNE 538
           W  +++   +HG    G E       +R+ G  P   ++ ++ N  + +G  NE
Sbjct: 841 WTVMIAGYGMHG---FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNE 891



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 220/402 (54%), Gaps = 9/402 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  LHG  VK  FS +++ +N L+DMY+KCG +NGA  VF KM +  +VSWT+ +  
Sbjct: 587 LSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAA 646

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +++ G     + LF +M S  V+P+ +T+++ + A    SS++ G  +H   +K+G   N
Sbjct: 647 YVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 706

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V N++I+MY+KCG + EA  +F  +P K +++WN MI GY      ++ L LF  MQ+
Sbjct: 707 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK 766

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
             + PD+ T    L AC  L ++  G +IHG ++  G  Y     +A +LVD Y KCG L
Sbjct: 767 QFK-PDDITMACVLPACAGLAALDKGREIHGHILRRG--YFSDLHVACALVDMYAKCGLL 823

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           V A+ +FD+I +K +ISW+ +I GY       EA+  F ++R   ++ D    S ++   
Sbjct: 824 VLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNAC 883

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
           +   L+ +G +    + +   G++  + +   +VD+  + G + +A +    MP+K +  
Sbjct: 884 SHSGLLNEGWKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTT 942

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            W V+++G   H   K A  +   +   ++EPD   Y  VL+
Sbjct: 943 IWGVLLSGCRIHHDVKLAEKVAEHIF--ELEPDNTRYYVVLA 982



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 97/178 (54%), Gaps = 6/178 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    LD G ++HG +++ G+  DL +   L+DMYAKCG +  A  +FD + 
Sbjct: 775 MACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP 834

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVEN 131
           +++++SWT ++ G+  +G     +S F +M  + ++P+E + S  + A   SG+L+  E 
Sbjct: 835 KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLN--EG 892

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
               + M  + G E        ++D+ ++ G +++A +  + MP K   T W  +++G
Sbjct: 893 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 104/208 (50%), Gaps = 12/208 (5%)

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           +L  A+EL  + +   L ++ +   S++ + A+   +E GK++H+        +D ++  
Sbjct: 351 DLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGA 408

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            +V MY+ CG + +  ++F+++    V  W ++++ Y K G  +E+V LF+KM    V  
Sbjct: 409 KLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG 468

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA----GRLDE 472
           +   +  VL   +  G V+E +     +     +K      + +V+SL  A    G ++ 
Sbjct: 469 NCYTFTCVLKCFAALGKVKECKRVHGYV-----LKLGFGSNTAVVNSLIAAYFKFGGVES 523

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHG 500
           A NL + +  +P +  W ++++ C V+G
Sbjct: 524 AHNLFDELS-EPDVVSWNSMINGCVVNG 550


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/663 (36%), Positives = 380/663 (57%), Gaps = 11/663 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH   +K G    + + N L+D Y K G +  A  VF +M +++ V++ A+M G  + G 
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF  M  + +    FT S+ +  +  ++ +  G Q+H + ++S    N  V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++D YSKC  +++  R+FD MP +  +++N +IA Y     +   L LFR+MQ+ G    
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
              + + L   GSL  V  G QIH  L+  G   + + ++  +L+D Y KCG L  A+  
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL--ASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F    +KS ISW++LI GY Q     EA++LF  +R   L+ D    SS++   +  A++
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI 454

Query: 334 EQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             G+Q+H+Y  +  SG  +SV   + +VDMY KCG +DEA   F+EMP +N ++W  +I+
Sbjct: 455 GLGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y  +G AK A+ +F  ML     PD V +L+VL+ACSH+GL +E  +YF  + +   + 
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  EHY+C++D+LGR G   + + ++  MP K    IW ++L +CR+HG+ EL R   + 
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L  ++  +   YV++SNI+A AG W +   ++K+ R +G++K +G SWVE+ ++I+ F  
Sbjct: 633 LFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFAS 692

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
            D T P+ ++I   L  + K M ++ G+   +  ALH +  E K ESL+ HSE+LAI  A
Sbjct: 693 NDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITCALHMVDHELKLESLKYHSERLAIAFA 751

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L    +N   G  IR+ KNL  C DCH  IK +SKI+    +VRD+ RFH F+ GVCSCG
Sbjct: 752 L----MNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCG 807

Query: 692 DYW 694
           DYW
Sbjct: 808 DYW 810



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 247/509 (48%), Gaps = 17/509 (3%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FS +L+L+      Y+  G++  A  +F     RN  +WT +M      G     LSLF 
Sbjct: 75  FSLNLILS-----AYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            M    V P+  T++T +   G          +H   +K G + +  V N+++D Y K G
Sbjct: 130 AMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            +  A R+F  M  K  +T+NAM+ G    G   + L LF  M+  G     FTF+S L 
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
               +  +  G Q+H  ++ S    +V   +  SL+DFY KC CL + RR+FD + ++  
Sbjct: 245 VAAGMAHLLLGHQVHALVLRSTSVLNV--FVNNSLLDFYSKCDCLDDMRRLFDEMPERDN 302

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +S++ +I  YA  +  A  + LFR++++          ++M+ V      V  GKQIHA 
Sbjct: 303 VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQ 362

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
              +    +  + N+++DMY KCG++D A   F+    K+ ++WT +ITGY ++G  +EA
Sbjct: 363 LVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEA 422

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF  M    + PD   + +++ A S   ++   ++  S L      K  +   S +VD
Sbjct: 423 LQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG-YKSSVFSGSVLVD 481

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
              + G LDEA    + MP + SI+ W  ++SA   +G+ +   ++ E +L   G NP +
Sbjct: 482 MYAKCGCLDEALRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHC-GFNPDS 539

Query: 523 YVMMSNIHA--DAGSWNECERLRKLARSK 549
              +S + A    G  +EC +   L + +
Sbjct: 540 VTFLSVLAACSHNGLADECMKYFHLMKHQ 568



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 9/392 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H  +++     ++ +NN L+D Y+KC  ++    +FD+M ER+ VS+  ++  +  
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N  A   L LF +M            +T +  +G L  V  G QIH   +  G     ++
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN++IDMYSKCG ++ A   F     KS I+W A+I GYV  G  ++ L LF  M+  G 
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
            PD  TF+S +KA  SL  +G G Q+H +LI SG+  S   V +GS LVD Y KCGCL E
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS---VFSGSVLVDMYAKCGCLDE 491

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A R FD + +++ ISW+++I  YA       A+++F  +       D     S++   + 
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551

Query: 330 FALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
             L ++  K  H    +            ++D   + G   +  ++  EMP K + + WT
Sbjct: 552 NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWT 611

Query: 388 VIITGYGKHG---LAKEAVGLFRKMLLDDVEP 416
            I+     HG   LA+ A      M   D  P
Sbjct: 612 SILHSCRIHGNQELARVAADKLFGMEPTDATP 643



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  +R   +  ++  S   ++  G QLH  L++ G+   +   + L+DMYAKCG ++ A 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
             FD+M ERN +SW A++  +   G AK  + +F  M      P+  T  + + A     
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
             +  M+   + MK  +  +P   +   +ID   + G  ++  +M   MP K+  I W +
Sbjct: 554 LADECMKYFHL-MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612

Query: 185 MI 186
           ++
Sbjct: 613 IL 614


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/660 (36%), Positives = 382/660 (57%), Gaps = 22/660 (3%)

Query: 40  KMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           KMG +  D+ + + LIDM A+ G++  A  VFD ++E+ VV WT L+  ++Q   A+  +
Sbjct: 180 KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            +F        +P+ +T+S+ I A   L SV  G+Q+H + ++ GF  +  V   ++DMY
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299

Query: 159 SKCG---RINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKMQEHGEIPDE 214
           +K      ++ A ++F+ M    +I+W A+I+GYV +G   +K ++LF +M      P+ 
Sbjct: 300 AKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T++S LKAC ++     G Q+H  +I S    +    +  +LV  Y + GC+ EARRVF
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHVIKSN--QAAAHTVGNALVSMYAESGCMEEARRVF 417

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           + + ++S+IS  +                L  ++    + +     +S++   A   ++ 
Sbjct: 418 NQLYERSMISCIT----------EGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLT 467

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +G+Q+HA   K   G D  VSNS+V MY +CG +++A   FNE+  +NV++WT +I+G  
Sbjct: 468 KGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLA 527

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           KHG A+ A+ LF  M+L  V+P+ V Y+AVLSACSH GLV E +EYF  +  D  + PR+
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY+C+VD L R+G + EA   I  MP+K    +W+TLL ACR H ++E+G    + ++ 
Sbjct: 588 EHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIE 647

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           L+  +P  YV++SN++ADAG W+E  R+R   R   L K  G SW+EV+   H F  GD 
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
           +HP  + I+  L  +   +K  +G+V      LHD+ +E KE+ L  HSEK+A+   L+ 
Sbjct: 708 SHPRAQDIYGKLDTLVGEIK-GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLI- 765

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
                   K IR+FKNLRVC DCH  IK +SK  +   ++RD+ RFHR + G CSCG+YW
Sbjct: 766 ---TTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 228/439 (51%), Gaps = 33/439 (7%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG---EMNGAC 67
           +R  ++  +  C++   +  G+QLH   ++MGF+ D  ++  L+DMYAK      M+ A 
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYAN 312

Query: 68  AVFDKMLERNVVSWTALMCGFLQNG-NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            VF++M + +V+SWTAL+ G++Q+G      + LF +M + S+KPN  T S+ +KA   +
Sbjct: 313 KVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANI 372

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT----- 181
           S  ++G Q+H   +KS       VGN+++ MY++ G + EA R+F+ +  +S+I+     
Sbjct: 373 SDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEG 432

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
            +A +   +  G  D G+                TF S + A  S+G +  G Q+H   +
Sbjct: 433 RDAPLDHRI--GRMDMGI-------------SSSTFASLISAAASVGMLTKGQQLHAMTL 477

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +GF       ++ SLV  Y +CG L +A R F+ ++ ++VISW+S+I G A+      A
Sbjct: 478 KAGF--GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIV 359
           + LF  +    ++ +     +++   +   LV +GK+ +  + +   GL   + +   +V
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDHGLIPRMEHYACMV 594

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-D 417
           D+  + GL+ EA E  NEMP+K + + W  ++     H   +  VG      + ++EP D
Sbjct: 595 DLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIE--VGEIAAKNVIELEPRD 652

Query: 418 GVAYLAVLSACSHSGLVEE 436
              Y+ + +  + +GL +E
Sbjct: 653 PAPYVLLSNLYADAGLWDE 671



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 258/550 (46%), Gaps = 55/550 (10%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALM 85
           L  G  LH  L++      D ++ N L+ +Y++CG +  A  VFD M   R++VSWTA+ 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS-----GVLSSVENGMQIHGMCM 140
               +NG  +  L L  +M  S + PN +TL     A        L        +H M +
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
              +  +  VG+++IDM ++ G +  A ++FD +  K+++ W  +I+ YV    +++ + 
Sbjct: 184 ---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F    E G  PD +T +S + AC  LGSV  G Q+H   +  GF  +    ++  LVD 
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGF--ASDACVSCGLVDM 298

Query: 261 YVKCG---CLVEARRVFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQ 314
           Y K      +  A +VF+ + +  VISW++LI GY Q   +EN  + M LF ++   S++
Sbjct: 299 YAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQEN--KVMVLFGEMLNESIK 356

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +    SS++   A+ +  + G+Q+HA+  K       +V N++V MY + G ++EA  +
Sbjct: 357 PNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRV 416

Query: 375 FNEMPVKNVV-------------------------TWTVIITGYGKHGLAKEAVGLFRKM 409
           FN++  ++++                         T+  +I+     G+  +   L    
Sbjct: 417 FNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMT 476

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
           L      D     +++S  S  G +E++   F+ L  D+     +  ++ ++  L + G 
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL-KDR----NVISWTSMISGLAKHGY 531

Query: 470 LDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NYV 524
            + A +L   M    VKP+   +  +LSAC   G +  G+E    + R  G  P   +Y 
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591

Query: 525 MMSNIHADAG 534
            M ++ A +G
Sbjct: 592 CMVDLLARSG 601


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 395/676 (58%), Gaps = 7/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+ +  L+ G ++H  +++ G+  D+   N L+DMY+K G++  A  VF K+ E +V
Sbjct: 209 VNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW A + G + +G+ +  L L  QM SS + PN FTLS+ +KA     +   G QIHG 
Sbjct: 269 VSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGF 328

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + +  +   ++DMY+K G +++A ++FD +P + L+ WNA+I+G        + 
Sbjct: 329 MVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEA 388

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +M++ G   +  T  + LK+  SL ++    Q+H      GF  S   V+ G L+
Sbjct: 389 LSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGF-LSDSHVVNG-LI 446

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL  A RVF+      +I+++S+I   +Q ++  +A++LF ++  + L  D F
Sbjct: 447 DSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPF 506

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           VLSS++   A  +  EQGKQ+HA+  K     D    N++V  Y KCG I++A   F+ +
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGL 566

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P K VV+W+ +I G  +HG  K A+ +F +M+ + + P+ +   +VL AC+H+GLV+E++
Sbjct: 567 PEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK 626

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF+ +     ++   EHY+C++D LGRAG+LD+A  L+ SMP + + A+W  LL+A RV
Sbjct: 627 RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRV 686

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D ELGR   E L  L+ +    +V+++N +A AG W++  ++RKL +   +KK    S
Sbjct: 687 HRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMS 746

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  ++H F  GD +HP    I+  L E+   M +  G+V  V+  LHD+ +  KE  
Sbjct: 747 WVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKA-GYVPNVEVDLHDVDKNEKELL 805

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+  AL+    +   G  IRV KNLR+C DCH   K +S I+    ++RD  
Sbjct: 806 LSHHSERLAVAFALI----STPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDIN 861

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSC DYW
Sbjct: 862 RFHHFRDGACSCRDYW 877



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 264/502 (52%), Gaps = 9/502 (1%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGF 88
           +G QLH   +  G   D+ + N L+ MY   G ++ A  VFD+   ERN VSW  LM  +
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           ++N      + +F +M    V+PNEF  S  + A      +E G ++H M +++G++ + 
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
              N+++DMYSK G I  AA +F  +P   +++WNA I+G VL G+    L L  +M+  
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G +P+ FT +S LKAC   G+   G QIHGF++ +         IA  LVD Y K G L 
Sbjct: 298 GLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKAN--ADSDNYIAFGLVDMYAKHGLLD 355

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A++VFD I Q+ ++ W++LI G +     AEA+ LF ++R+    V+   L++++   A
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA 415

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               +   +Q+HA A K+    D+ V N ++D Y KC  ++ A  +F +    +++ +T 
Sbjct: 416 SLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTS 475

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +IT   +    ++A+ LF +ML   ++PD     ++L+AC+     E+ ++  + L   +
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            M   +   + +V +  + G +++A      +P K  ++ W  ++     HG    G+  
Sbjct: 536 FMSD-VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRA 590

Query: 509 GEILLRL-DGDNPVNYVMMSNI 529
            ++  R+ D     N++ M+++
Sbjct: 591 LDVFHRMVDEHISPNHITMTSV 612



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 8/410 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  L+K G     +  N L+  Y+KC     A  VFD++ +   VSW++L+  +  
Sbjct: 23  GAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  L  F  M S SV+ NEF L   +K +        G Q+H + M +G   +  V
Sbjct: 81  NAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCA---PDAGFGTQLHALAMATGLGGDIFV 137

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            N+++ MY   G ++EA  +FD     ++ ++WN +++ YV        + +F +M   G
Sbjct: 138 ANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGG 197

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+EF F+  + AC     +  G ++H  +I +G+   V T  A +LVD Y K G +  
Sbjct: 198 VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT--ANALVDMYSKLGDIRM 255

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  VF  + +  V+SW++ I G     +   A+EL  Q++   L  + F LSS++   A 
Sbjct: 256 AAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                 G+QIH +  K  +  D  ++  +VDMY K GL+D+A ++F+ +P +++V W  +
Sbjct: 316 SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           I+G        EA+ LF +M  +  + +     AVL + +    + ++++
Sbjct: 376 ISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQ 425



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 201/396 (50%), Gaps = 8/396 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  LV     L+  L+ C+ +   + G Q+HG +VK     D  +   L+DMYAK G ++
Sbjct: 296 SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLD 355

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFD + +R++V W AL+ G          LSLFC+M       N  TL+  +K++ 
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA 415

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L ++ +  Q+H +  K GF  +  V N +ID Y KC  +N A R+F+   +  +I + +
Sbjct: 416 SLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTS 475

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI       + +  + LF +M   G  PD F  +S L AC SL +   G Q+H  LI   
Sbjct: 476 MITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535

Query: 245 FPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           F   +  V AG +LV  Y KCG + +A   F  + +K V+SWS++I G AQ  +   A++
Sbjct: 536 F---MSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALD 592

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDM 361
           +F ++ +  +  +   ++S++       LV++ K+ +  + K   G++ +  +   ++D+
Sbjct: 593 VFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIERTEEHYACMIDL 651

Query: 362 YLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
             + G +D+A EL N MP + N   W  ++     H
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 148/306 (48%), Gaps = 15/306 (4%)

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  IH  L+ SG    +  V    L+ FY KC     ARRVFD I     +SWSSL+  Y
Sbjct: 23  GAHIHAHLLKSG----LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAY 78

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           +      +A+  FR +R  S++ + FVL  ++    D      G Q+HA A     G D 
Sbjct: 79  SNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDI 135

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            V+N++V MY   G +DEA  +F+E    +N V+W  +++ Y K+     AV +F +M+ 
Sbjct: 136 FVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVW 195

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V+P+   +  V++AC+ S  +E  ++  + +      K  +   + +VD   + G + 
Sbjct: 196 GGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD-VFTANALVDMYSKLGDIR 254

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNI 529
            A  +   +P +  +  W   +S C +HG     +   E+LL++   G  P  + + S +
Sbjct: 255 MAAVVFGKVP-ETDVVSWNAFISGCVLHGH---DQHALELLLQMKSSGLVPNVFTLSSIL 310

Query: 530 HADAGS 535
            A AGS
Sbjct: 311 KACAGS 316



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           RSL+  G +L+     +A    + QG  IHA+  K  SGL     N ++  Y KC L   
Sbjct: 2   RSLETIGPLLTR----YAATQSLLQGAHIHAHLLK--SGLFAVFRNHLLSFYSKCRLPGS 55

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+E+P    V+W+ ++T Y  + + ++A+G FR M    V  +      VL     
Sbjct: 56  ARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPD 115

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +G   +       L     +   I   + +V   G  G +DEA+ + +    + +   W 
Sbjct: 116 AGFGTQ----LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWN 171

Query: 491 TLLSA 495
            L+SA
Sbjct: 172 GLMSA 176


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/732 (36%), Positives = 410/732 (56%), Gaps = 68/732 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +      G  +H  +   GF +++ + N L+ MY +CG    A  VFD+M ER V
Sbjct: 133 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 192

Query: 79  ---VSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQ 134
              VSW +++  ++Q G++   + +F +M     ++P+  +L   + A   + +   G Q
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
           +HG  ++SG   +  VGN+++DMY+KCG + EA ++F+ M  K +++WNAM+ GY     
Sbjct: 253 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 312

Query: 190 -------------------------VLAGYSDKGL-----LLFRKMQEHGEIPDEFTFTS 219
                                    V+AGY+ +GL      +FR+M+  G  P+  T  S
Sbjct: 313 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVS 372

Query: 220 TLKACGSLGSVGGGTQIHGFLIT------SGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            L  C   G++  G + H   I          P     VI  +L+D Y KC     AR +
Sbjct: 373 LLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVI-NALIDMYSKCKSPKAARAM 431

Query: 274 FDLIEQK--SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF---- 327
           FDLI  K  SV++W+ LI G AQ     EA+ELF Q+    LQ D FV+ +   +     
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM----LQPDNFVMPNAFTISCALM 487

Query: 328 --ADFALVEQGKQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELFNEMPVKN 382
             A    +  G+QIHAY  +  +  +++   V+N ++DMY K G +D A  +F+ M  +N
Sbjct: 488 ACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 545

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V+WT ++TGYG HG  +EA+ +F +M    + PDGV ++ VL ACSHSG+V++   YF+
Sbjct: 546 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFN 605

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  D  + P  EHY+C+VD L RAGRLDEA  LI  MP+KP+ A+W  LLSACRV+ ++
Sbjct: 606 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 665

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ELG      LL L+  N  +Y ++SNI+A+A  W +  R+R L ++ G+KK  G SWV+ 
Sbjct: 666 ELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 725

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
            K    F+ GD +HP++++I+ +L ++ +R+K  LG+V   ++ALHD+ +E K + L  H
Sbjct: 726 RKGTATFFAGDWSHPMSQQIYDLLRDLMQRIK-ALGYVPDNRFALHDVDDEEKGDLLSEH 784

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SEK    LAL  G L   PG  IR+ KNLR CGDCH     +S I++   +VRD++RFH 
Sbjct: 785 SEK----LALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHH 840

Query: 683 FEGGVCSCGDYW 694
           F+ G CSC  YW
Sbjct: 841 FKNGSCSCRGYW 852



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 262/540 (48%), Gaps = 62/540 (11%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGFLQN 91
           +H  L+  G   D      +I MY        A +V  ++      V  W  L+   +  
Sbjct: 48  IHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 104

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  +  L L+ +M     +P+ +T    +KA G + S   G  +H +   SGFEWN  VG
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAK---SLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           N ++ MY +CG    A ++FD M  +    L++WN+++A Y+  G S + + +F +M E 
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224

Query: 209 -GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  +  + L AC S+G+   G Q+HG+ + SG    V   +  ++VD Y KCG +
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV--FVGNAVVDMYAKCGMM 282

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA +VF+ ++ K V+SW++++ GY+Q     +A+ LF ++RE  ++++    S+++  +
Sbjct: 283 EEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGY 342

Query: 328 ADFAL-----------------------------------VEQGKQIHAYAAKVPSGLDT 352
           A   L                                   +  GK+ H +A K    LD 
Sbjct: 343 AQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDE 402

Query: 353 S-------VSNSIVDMYLKCGLIDEATELFNEMPVKN--VVTWTVIITGYGKHGLAKEAV 403
           +       V N+++DMY KC     A  +F+ +P K+  VVTWTV+I G  +HG A EA+
Sbjct: 403 NDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEAL 462

Query: 404 GLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            LF +ML  D  V P+       L AC+  G +   ++  + +  ++     +   +C++
Sbjct: 463 ELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLI 522

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLDG 517
           D   ++G +D A+ + ++M  +  ++ W +L++   +HG     L++  E+ ++ L  DG
Sbjct: 523 DMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDG 581



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 205/429 (47%), Gaps = 55/429 (12%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
           L + L  C+       G Q+HG  ++ G   D+ + N ++DMYAKCG M  A  VF++M 
Sbjct: 234 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 293

Query: 74  ----------------------------------LERNVVSWTALMCGFLQNGNAKACLS 99
                                             +E NVV+W+A++ G+ Q G     L 
Sbjct: 294 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 353

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF---EWNP----VVGN 152
           +F QM     +PN  TL + +    +  ++ +G + H   +K      E +P    +V N
Sbjct: 354 VFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVIN 413

Query: 153 SIIDMYSKCGRINEAARMFDVMPAK--SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           ++IDMYSKC     A  MFD++P K  S++TW  +I G    G +++ L LF +M +   
Sbjct: 414 ALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDN 473

Query: 211 --IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             +P+ FT +  L AC  LG++  G QIH +++ + F  S    +A  L+D Y K G + 
Sbjct: 474 FVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE-SAMLFVANCLIDMYSKSGDVD 532

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            AR VFD + Q++ +SW+SL+ GY       EA+++F ++++  L  DG     ++   +
Sbjct: 533 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACS 592

Query: 329 DFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV- 383
              +V+QG        K    VP     +    +VD+  + G +DEA EL   MP+K   
Sbjct: 593 HSGMVDQGINYFNGMNKDFGVVPGAEHYAC---MVDLLSRAGRLDEAMELIRGMPMKPTP 649

Query: 384 VTWTVIITG 392
             W  +++ 
Sbjct: 650 AVWVALLSA 658


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/739 (35%), Positives = 410/739 (55%), Gaps = 65/739 (8%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C +      G   HG +   GF  ++ + N L+ MY++CG +  A  +FD++ 
Sbjct: 13  LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 72

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMG------SSSVKPNEFTLSTNIKASGV 125
           +R   +V+SW +++   +++ NA   L LF +M        ++ + +  ++   + A G 
Sbjct: 73  QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 132

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L +V    ++HG  +++G   +  VGN++ID Y+KCG +  A ++F++M  K +++WNAM
Sbjct: 133 LKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 192

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           +AGY                              V+AGYS +G     L +FR+M   G 
Sbjct: 193 VAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGS 252

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGF-----LITSGFPYSVKT---VIAGSLVDFYV 262
           +P+  T  S L AC SLG+   G +IH +     L+T    +  +    ++  +L+D Y 
Sbjct: 253 LPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 312

Query: 263 KCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DGF 318
           KC     AR +FD I  E+++V++W+ +I G+AQ  +  +A++LF ++      V  + +
Sbjct: 313 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 372

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELF 375
            +S ++   A  A +  GKQIHAY  +     D+S   V+N +++MY KCG +D A  +F
Sbjct: 373 TISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGDVDTARHVF 431

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  K+ ++WT ++TGYG HG   EA+ +F KM      PD + +L VL ACSH G+V+
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 491

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF  +  D  + PR EHY+  +D L R GRLD+A   ++ MP++P+  +W  LLSA
Sbjct: 492 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CRVH ++EL       L+ ++ +N  +Y ++SNI+A AG W +  R+R L +  G+KK  
Sbjct: 552 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 611

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ EE K
Sbjct: 612 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK-AMGYVPETNFALHDVDEEEK 670

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
              L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    VVR
Sbjct: 671 NNLLVEHSEKLALAYGL----LTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 726

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D +RFH F+ G CSCG YW
Sbjct: 727 DPSRFHHFKNGSCSCGGYW 745



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 228/456 (50%), Gaps = 62/456 (13%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  +  + + FTL   +KA G L S   G   HG+   +GFE N  + N+++ MYS+CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 164 INEAARMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDE 214
           + EA+ +FD +  + +   I+WN++++ +V +  +   L LF KM      +   E  D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            +  + L ACGSL +V    ++HG  I +G    V   +  +L+D Y KCG +  A +VF
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV--FVGNALIDAYAKCGLMENAVKVF 178

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD---------GF------- 318
           +++E K V+SW++++ GY+Q  N   A ELF+ +R+ ++ +D         G+       
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 319 -------------------VLSSMMGVFADFALVEQGKQIHAYAAKV----------PSG 349
                               + S++   A      QG +IHAY+ K              
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLAKEAVGLFR 407
            D  V N+++DMY KC     A  +F+++P+  +NVVTWTV+I G+ ++G + +A+ LF 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 408 KMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS-CIVDSL 464
           +M+ +   V P+      +L AC+H   +   ++  + +    +        + C+++  
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            + G +D A+++ +SM  K +I+ W ++++   +HG
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG 453


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/670 (37%), Positives = 397/670 (59%), Gaps = 13/670 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +++ GVQ+H  +VK GF F   + N LI MY K   +  A AVFD M+ R+ V+W  ++ 
Sbjct: 220 IIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+   G       +F +M  + VK +     T +K       +    Q+H   +K+G+E+
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
              +  +++  YSKC  ++EA ++F +   A +++TW AMI G+V    + K + LF +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQM 399

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G  P+ FT+++ L   G   S+   +Q+H  +I +   Y     +A +L+D YVK G
Sbjct: 400 SREGVRPNHFTYSTVL--AGKPSSLL--SQLHAQIIKA--YYEKVPSVATALLDAYVKTG 453

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +VE+ RVF  I  K +++WS+++ G AQ  +  +AME+F QL +  ++ + +  SS++ 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 326 V-FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              +  A VE GKQIHA A K        VS++++ MY K G I+ A ++F     +++V
Sbjct: 514 ACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +ITGYG+HG AK+A+ +F+ M    +  D V ++ VL+AC+H+GLVEE ++YF+ +
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D  +  + EHYSC+VD   RAG  D+A ++I  MP   S  IW+TLL+ACRVH +LEL
Sbjct: 634 IKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLEL 693

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G+   E L+ L  ++ V YV++SNIHA AG+W E   +RKL   + +KK AG SW+E+  
Sbjct: 694 GKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKN 753

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            I  F  GD +HP ++ ++  L E+  ++K ++G+     Y  HD++EE KE  L  HSE
Sbjct: 754 RIFSFLAGDVSHPFSDLVYAKLEELSIKLK-DMGYQPDTNYVFHDVEEEHKEAILSQHSE 812

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LAI   L+       PG  I++ KNLR+CGDCH  I+ +S I +   +VRD+ RFH F+
Sbjct: 813 RLAIAYGLIA----LPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFK 868

Query: 685 GGVCSCGDYW 694
           GGVCSCG YW
Sbjct: 869 GGVCSCGGYW 878



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 261/502 (51%), Gaps = 14/502 (2%)

Query: 15  LADSLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           L+ +L+ C   +L D   G Q+H   +K GF  D+ +   L+DMY K  +      +FD+
Sbjct: 107 LSCALKVCG--VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDE 164

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M  +NVVSWT+L+ G+ +NG     + L  QM    V PN FT +T + A    S +E G
Sbjct: 165 MGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           +Q+H M +K+GFE+   V N++I MY K   + +A  +FD M  +  +TWN MI GY   
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G+  +G  +F +M+  G       F + LK C     +    Q+H  ++ +G+ ++    
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD-- 342

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           I  +L+  Y KC  + EA ++F + +   +V++W+++I G+ Q  N  +A++LF Q+   
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE 402

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
            ++ + F  S+++       L +   Q I AY  KVP     SV+ +++D Y+K G + E
Sbjct: 403 GVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVP-----SVATALLDAYVKTGNVVE 457

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           +  +F  +P K++V W+ ++TG  +   +++A+ +F +++ + V+P+   + +V++ACS 
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           S    E  +              +   S ++    + G ++ A+ +      +  I  W 
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWN 576

Query: 491 TLLSACRVHGDLELGREVGEIL 512
           ++++    HGD +   EV +I+
Sbjct: 577 SMITGYGQHGDAKKALEVFQIM 598



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 239/485 (49%), Gaps = 18/485 (3%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+   +++  +  L+  F +N + +  L LF  + SS +  +  TLS  +K  GV
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L     G Q+H   +KSGF  +  VG S++DMY K     +   +FD M  K++++W ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           ++GY   G +D+ + L  +MQ  G  P+ FTF + L A      + GG Q+H  ++ +GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            ++  T +  +L+  Y+K   + +A  VFD +  +  ++W+ +I GYA      E  ++F
Sbjct: 237 EFT--TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R   +++   V  + + + +    +   KQ+H    K        +  +++  Y KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354

Query: 366 GLIDEATELFNEM-PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             +DEA +LF+      NVVTWT +I G+ ++   K+AV LF +M  + V P+   Y  V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414

Query: 425 LSACSHSGLVEESQE----YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           L+    S L +   +    Y+ ++       P +   + ++D+  + G + E+  +  S+
Sbjct: 415 LAGKPSSLLSQLHAQIIKAYYEKV-------PSVA--TALLDAYVKTGNVVESARVFYSI 465

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P K  +A W  +L+      D E   EV  I L  +G  P  Y   S I+A + S    E
Sbjct: 466 PAKDIVA-WSAMLTGLAQTRDSEKAMEVF-IQLVKEGVKPNEYTFSSVINACSSSAATVE 523

Query: 541 RLRKL 545
             +++
Sbjct: 524 HGKQI 528



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 2/170 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C S    +++G Q+H   VK G S  L +++ L+ MY+K G +  A  VF +  ER++VS
Sbjct: 515 CSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVS 574

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W +++ G+ Q+G+AK  L +F  M +  +  ++ T    + A      VE G +   + +
Sbjct: 575 WNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMI 634

Query: 141 KS-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
           K    +      + ++D+YS+ G  ++A  + + MP   S   W  ++A 
Sbjct: 635 KDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAA 684


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/669 (37%), Positives = 390/669 (58%), Gaps = 13/669 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +D G ++H   VK G    + + N LI+MY+KCG +  A AVF +M  R++VSW  LM G
Sbjct: 217 VDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAG 276

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            L N +    L LF    +S  K ++ T ST IK    L  +    Q+H   +K GF  +
Sbjct: 277 LLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSD 336

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             V  +I+D YSKCG +++A  +F +MP ++++++W AMI G +          LF +M+
Sbjct: 337 GNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMR 396

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E    P+EFT+++ L A   +       QIH  +I + + ++    +  +L+  Y K G 
Sbjct: 397 EDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPS--VGTALLASYSKLGN 450

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
             EA  +F +I+ K V++WS+++  Y+Q  +   A  +F ++  + ++ + F +SS +  
Sbjct: 451 TEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDA 510

Query: 327 FAD-FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
            A   A ++QG+Q HA + K        V +++V MY + G ID A  +F     +++V+
Sbjct: 511 CASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVS 570

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I+GY +HG +KEA+  FR+M    +E DG  +LAV+  C+H+GLV+E Q+YF  + 
Sbjct: 571 WNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMV 630

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  + P +EHYSC+VD   RAG+LDE  NLIE MP      +W+TLL ACRVH ++ELG
Sbjct: 631 MDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELG 690

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +   + LL L+ D+   YV++SNI+A AG W E + +RKL  SK +KK AG SW+++  +
Sbjct: 691 KLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNK 750

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F   D +HPL+E+I+  L  M  R+K+E G+       LHDI EE KE  L +HSE+
Sbjct: 751 VHSFIACDKSHPLSEQIYAKLKAMTTRLKQE-GYCPNTSVVLHDIAEEQKETMLVMHSER 809

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   L+       P   +++ KNLRVCGDCH  +K +S I     ++RD +RFH F  
Sbjct: 810 LALAFGLI----ATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNA 865

Query: 686 GVCSCGDYW 694
           G CSCGD+W
Sbjct: 866 GACSCGDFW 874



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 249/493 (50%), Gaps = 13/493 (2%)

Query: 31  GVQLHGALVKMGFS-FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   VK GF   ++ +   L+DMY KCG +     VF+ M +RNVV+WT+L+ G++
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV 177

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q       ++LF +M +  V PN FT ++ + A     +V+ G ++H   +K G      
Sbjct: 178 QGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVF 237

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+I+MYSKCG + EA  +F  M  + +++WN ++AG +L  +  + L LF   +   
Sbjct: 238 VCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASM 297

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
               + T+++ +K C +L  +    Q+H  ++  GF      + A  ++D Y KCG L +
Sbjct: 298 AKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTA--IMDAYSKCGELDD 355

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A  +F L+   ++V+SW+++I G  Q  ++  A  LF ++RE +++ + F  S+++    
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASI 415

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              L     QIHA   K       SV  +++  Y K G  +EA  +F  +  K+VV W+ 
Sbjct: 416 PILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSA 471

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +++ Y + G    A  +F KM +  ++P+     + + AC+      +    F  +    
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLEL 504
           R +  I   S +V    R G +D A+ + E    +  ++ W +++S    HG     L+ 
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVS-WNSMISGYAQHGYSKEALDT 590

Query: 505 GREVGEILLRLDG 517
            R++  + + +DG
Sbjct: 591 FRQMETVGIEMDG 603



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 225/443 (50%), Gaps = 24/443 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML-ERN 77
           ++ C+    L    QLH  ++K GF  D  +   ++D Y+KCGE++ A  +F  M   +N
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQN 368

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS-GVLSSVENGMQIH 136
           VVSWTA++ G +QN +     +LF +M   +VKPNEFT ST + AS  +L       QIH
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLP-----QIH 423

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K+ ++  P VG +++  YSK G   EA  +F ++  K ++ W+AM++ Y  AG  D
Sbjct: 424 AQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCD 483

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGS-LGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
               +F KM   G  P+EFT +S + AC S    +  G Q H   I+  + Y     +  
Sbjct: 484 GATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHA--ISIKYRYQDAICVGS 541

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y + G +  AR VF+    + ++SW+S+I GYAQ     EA++ FRQ+    +++
Sbjct: 542 ALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS------IVDMYLKCGLID 369
           DG    +++       LV++G+Q   + + V   +D ++S +      +VD+Y + G +D
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQY--FDSMV---MDHNISPTMEHYSCMVDLYSRAGKLD 656

Query: 370 EATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           E   L   MP     + W  ++     H   +  +G      L  +EPD  A   +LS  
Sbjct: 657 ETMNLIEGMPFPAGAMVWRTLLGACRVHKNVE--LGKLAAQKLLLLEPDDSATYVLLSNI 714

Query: 429 SHSGLVEESQEYFSRLCNDKRMK 451
             +    + ++   +L + K++K
Sbjct: 715 YAAAGRWKERDEVRKLMDSKKVK 737



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 221/420 (52%), Gaps = 11/420 (2%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVM 174
           +S  +K  G++    +G Q+H +C+K GF+   V VG +++DMY KCG + +   +F+ M
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P ++++TW +++ GYV        + LF +M+  G  P+ FTFTS L A  S G+V  G 
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           ++H   +  G   +V   +  SL++ Y KCG + EA+ VF  +E + ++SW++L+ G   
Sbjct: 222 RVHAQSVKFGCRSTV--FVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
            E+  EA++LF   R    ++     S+++ + A+   +   +Q+H+   K     D +V
Sbjct: 280 NEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV 339

Query: 355 SNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
             +I+D Y KCG +D+A  +F  MP  +NVV+WT +I G  ++     A  LF +M  D+
Sbjct: 340 MTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDN 399

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           V+P+   Y  VL+A   S  +   Q +   +  + +  P +   + ++ S  + G  +EA
Sbjct: 400 VKPNEFTYSTVLTA---SIPILLPQIHAQIIKTNYQHAPSVG--TALLASYSKLGNTEEA 454

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
            ++ + +  K  +A W  +LS     GD +    V  I + + G  P  + + S I A A
Sbjct: 455 LSIFKMIDHKDVVA-WSAMLSCYSQAGDCDGATNVF-IKMSMQGMKPNEFTISSAIDACA 512


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/739 (35%), Positives = 410/739 (55%), Gaps = 65/739 (8%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C +      G   HG +   GF  ++ + N L+ MY++CG +  A  +FD++ 
Sbjct: 120 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 179

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMG------SSSVKPNEFTLSTNIKASGV 125
           +R   +V+SW +++   +++ NA   L LF +M        ++ + +  ++   + A G 
Sbjct: 180 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 239

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L +V    ++HG  +++G   +  VGN++ID Y+KCG +  A ++F++M  K +++WNAM
Sbjct: 240 LKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 299

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           +AGY                              V+AGYS +G     L +FR+M   G 
Sbjct: 300 VAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGS 359

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGF-----LITSGFPYSVKT---VIAGSLVDFYV 262
           +P+  T  S L AC SLG+   G +IH +     L+T    +  +    ++  +L+D Y 
Sbjct: 360 LPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 419

Query: 263 KCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DGF 318
           KC     AR +FD I  E+++V++W+ +I G+AQ  +  +A++LF ++      V  + +
Sbjct: 420 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 479

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELF 375
            +S ++   A  A +  GKQIHAY  +     D+S   V+N +++MY KCG +D A  +F
Sbjct: 480 TISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGDVDTARHVF 538

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  K+ ++WT ++TGYG HG   EA+ +F KM      PD + +L VL ACSH G+V+
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 598

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF  +  D  + PR EHY+  +D L R GRLD+A   ++ MP++P+  +W  LLSA
Sbjct: 599 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CRVH ++EL       L+ ++ +N  +Y ++SNI+A AG W +  R+R L +  G+KK  
Sbjct: 659 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 718

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ EE K
Sbjct: 719 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIK-AMGYVPETNFALHDVDEEEK 777

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
              L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    VVR
Sbjct: 778 NNLLVEHSEKLALAYGL----LTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVR 833

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D +RFH F+ G CSCG YW
Sbjct: 834 DPSRFHHFKNGSCSCGGYW 852



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 253/511 (49%), Gaps = 62/511 (12%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L   ++  Y  CG  + A  V +++     V W  L+   ++ G   + +++ C+M  + 
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
            + + FTL   +KA G L S   G   HG+   +GFE N  + N+++ MYS+CG + EA+
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 169 RMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTS 219
            +FD +  + +   I+WN++++ +V +  +   L LF KM      +   E  D  +  +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            L ACGSL +V    ++HG  I +G    V   +  +L+D Y KCG +  A +VF+++E 
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDV--FVGNALIDAYAKCGLMENAVKVFNMMEF 290

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD---------GF------------ 318
           K V+SW++++ GY+Q  N   A ELF+ +R+ ++ +D         G+            
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350

Query: 319 --------------VLSSMMGVFADFALVEQGKQIHAYAAKV----------PSGLDTSV 354
                          + S++   A      QG +IHAY+ K               D  V
Sbjct: 351 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 410

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            N+++DMY KC     A  +F+++P+  +NVVTWTV+I G+ ++G + +A+ LF +M+ +
Sbjct: 411 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 470

Query: 413 D--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRAGR 469
              V P+      +L AC+H   +   ++  + +    +        + C+++   + G 
Sbjct: 471 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGD 530

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +D A+++ +SM  K +I+ W ++++   +HG
Sbjct: 531 VDTARHVFDSMSQKSAIS-WTSMMTGYGMHG 560



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 120/274 (43%), Gaps = 15/274 (5%)

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
           P+     +   +V  Y+ CG    A  V + +     + W+ LI  + ++  L  A+ + 
Sbjct: 46  PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 105

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++     ++D F L  ++    +      G   H          +  + N++V MY +C
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165

Query: 366 GLIDEATELFNEMP---VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL------DDVEP 416
           G ++EA+ +F+E+    + +V++W  I++ + K   A  A+ LF KM L       +   
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 225

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAK 474
           D ++ + +L AC     V +++E      N  R    ++ +  + ++D+  + G ++ A 
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHG---NAIRNGTFLDVFVGNALIDAYAKCGLMENAV 282

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            +   M  K  ++ W  +++     G+ +   E+
Sbjct: 283 KVFNMMEFKDVVS-WNAMVAGYSQSGNFKAAFEL 315


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/637 (39%), Positives = 378/637 (59%), Gaps = 17/637 (2%)

Query: 68  AVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +F+K +++ NV SW +++    ++G++   L  F  M   S+KPN  T    IK+   L
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             + +G Q H   +  GFE +  V ++++DMYSKCG + +A  +FD +  +++++W +MI
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225

Query: 187 AGYVLAGYSDKGLLLFRKM-------QEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHG 238
            GYV    + + LLLF++        +  GE+  D     S L AC  +        +HG
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           FLI  GF   +   +  +L+D Y KCG L  +RRVFD + ++ VISW+S+I  YAQ    
Sbjct: 286 FLIKRGFEGDLG--VENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMS 343

Query: 299 AEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            E+ME+F R +++  +  +   LS+++   A       GK IH    K+    +  V  S
Sbjct: 344 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 403

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           I+DMY KCG ++ A + F+ M  KNV +W+ ++ GYG HG AKEA+ +F +M +  V+P+
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + +++VL+ACSH+GL+EE   +F  + ++  ++P +EHY C+VD LGRAG L EA +LI
Sbjct: 464 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLI 523

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           + M ++P   +W  LL ACR+H +++LG      L  LD  N   YV++SNI+ADAG W 
Sbjct: 524 KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWE 583

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           + ER+R L ++ GL K  G S V++   +H F  GD  HP  EKI++ L ++  ++ +E+
Sbjct: 584 DVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL-QEV 642

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+V  +   LHD+  E KE  LRVHSEKLA+      G +N  PG  I + KNLRVCGDC
Sbjct: 643 GYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAF----GIMNTVPGTTIHIIKNLRVCGDC 698

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  IK +SKI+    VVRD+ RFH F  G+CSCGDYW
Sbjct: 699 HTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 222/434 (51%), Gaps = 19/434 (4%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS  L L  G Q H   +  GF  DL +++ L+DMY+KCGE+  
Sbjct: 146 LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 205

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--------GSSSVKPNEFTLS 117
           A  +FD++  RN+VSWT+++ G++QN +A   L LF +         G   V  +   + 
Sbjct: 206 ARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMV 265

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           + + A   +S       +HG  +K GFE +  V N+++D Y+KCG +  + R+FD M  +
Sbjct: 266 SVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQI 236
            +I+WN++IA Y   G S + + +F +M + GEI  +  T ++ L AC   GS   G  I
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  +I  G   +V   +  S++D Y KCG +  AR+ FD + +K+V SWS+++ GY    
Sbjct: 386 HDQVIKMGLESNV--FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHG 443

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTS 353
           +  EA+E+F ++    ++ +     S++   +   L+E+G    +  ++   V  G++  
Sbjct: 444 HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH- 502

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
               +VD+  + G + EA +L   M ++ + V W  ++     H          RK+   
Sbjct: 503 -YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF-- 559

Query: 413 DVEPDGVAYLAVLS 426
           +++P    Y  +LS
Sbjct: 560 ELDPKNCGYYVLLS 573


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/662 (34%), Positives = 392/662 (59%), Gaps = 9/662 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  + K+G   +  +   LID YA CG +N A   FD +  +++VSWT ++  + +N  
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  L LF +M      PN FT +  +KA   L +   G  +HG  +K+ +E +  VG  
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++D+Y+K G  N+  R+F+ MP   +I W+ MI+ Y  +  S + + LF +M+    +P+
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           +FTF S L++C S+ ++  G Q+H  ++  G   +V   ++ +L+D Y KCG L  + ++
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNV--FVSNALMDVYAKCGRLDNSMKL 300

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F  +  ++ ++W+++I+GY Q  +  +A+ L++ + E  +Q      SS++   A  A +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           E G QIH+ + K     D  V N+++DMY KCG I  A  +F+ +  ++ ++W  +I+GY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HGL  EA+  F+ M   +  P+ + ++++LSACS++GL++  Q YF  +  D  ++P 
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+C+V  LGR+G LD+A  LIE +P++P++ +W+ LL AC +H D++LG    + +L
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
           ++D  +   +V++SNI+A    WN    +RK  ++KG+KK  G SW+E    +H+F  GD
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HP  + I  +L E      E+ G+V  +   L D++++ K+  L VHSE+LA+   L+
Sbjct: 601 TSHPDMKMISGML-EWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLI 659

Query: 634 RGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           R      P +  IR+ KNLR+C DCH  IK +SKI++   ++RD  RFH F+ G+CSCGD
Sbjct: 660 R-----TPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGD 714

Query: 693 YW 694
           YW
Sbjct: 715 YW 716



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 216/428 (50%), Gaps = 4/428 (0%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M +RN VS+  L+ G++Q+      + LF ++     + N F  +T +K    +   E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             +H    K G E N  VG ++ID Y+ CG +N A + FD +  K +++W  M+A Y   
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
                 L LF +M+  G  P+ FTF   LKAC  L +   G  +HG ++ +   Y +   
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTC--YEMDLY 178

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +   L+D Y K G   +  RVF+ + +  VI WS +I  YAQ     EA+ELF Q+R   
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           +  + F  +S++   A    ++ GKQ+H +  KV    +  VSN+++D+Y KCG +D + 
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           +LF E+P +N VTW  +I GY + G   +A+ L++ ML   V+   V Y +VL AC+   
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            +E   +  S L         +   + ++D   + G +  A+ + + +  +  I+ W  +
Sbjct: 359 AMELGTQIHS-LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEIS-WNAM 416

Query: 493 LSACRVHG 500
           +S   +HG
Sbjct: 417 ISGYSMHG 424



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 225/415 (54%), Gaps = 8/415 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L+ C        G  +HG ++K  +  DL +   L+D+Y K G+ N    VF++M 
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + +V+ W+ ++  + Q+  ++  + LF QM  + V PN+FT ++ +++   + +++ G Q
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K G + N  V N+++D+Y+KCGR++ + ++F  +P ++ +TWN MI GYV +G 
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD 324

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            DK L L++ M E      E T++S L+AC SL ++  GTQIH   + +   Y    V+ 
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT--IYDKDVVVG 382

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG +  AR VFD++ ++  ISW+++I GY+    + EA++ F+ ++E    
Sbjct: 383 NALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEAT 372
            +     S++   ++  L++ G+       +   G++  + +    ++L  + G +D+A 
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMVQ-DYGIEPCMEHYTCMVWLLGRSGHLDKAV 501

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +L  E+P++ NV  W  ++     H      +G+     +  ++P   A   +LS
Sbjct: 502 KLIEEIPLEPNVKVWRALLGACVIHNDVD--LGIMSAQQILQIDPQDEATHVLLS 554


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/661 (37%), Positives = 381/661 (57%), Gaps = 8/661 (1%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            +H    + GF  DL + N LI MYAKCG ++ A  VFD M +R+V+SW A+M G  QNG 
Sbjct: 445  VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGC 504

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                 ++F QM    + P+  T  + +   G   ++E   ++H   +++G   +  VG++
Sbjct: 505  GHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSA 564

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
             I MY +CG I++A  +FD +  + + TWNAMI G        + L LF +MQ  G IPD
Sbjct: 565  FIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPD 624

Query: 214  EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
              TF + L A     ++    ++H     +G    V   +  +LV  Y KCG +  A++V
Sbjct: 625  ATTFINILSANVDEEALEWVKEVHSHATDAGL---VDLRVGNALVHTYSKCGNVKYAKQV 681

Query: 274  FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
            FD + +++V +W+ +I G AQ     +A   F Q+    +  D     S++   A    +
Sbjct: 682  FDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGAL 741

Query: 334  EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
            E  K++H +A       D  V N++V MY KCG ID+A  +F++M  ++V +WTV+I G 
Sbjct: 742  EWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGL 801

Query: 394  GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             +HG   EA+  F KM  +  +P+G +Y+AVL+ACSH+GLV+E +  F  +  D  ++P 
Sbjct: 802  AQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPT 861

Query: 454  IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
            +EHY+C+VD LGRAG L+EA+  I +MP++P  A W  LL AC  +G+LE+     +  L
Sbjct: 862  MEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERL 921

Query: 514  RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            +L   +   YV++SNI+A  G W +   +R + + KG++K  GRSW+EVD  IH F  GD
Sbjct: 922  KLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGD 981

Query: 574  DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
             +HP +++I+  L ++ +R+K + G+V   +  L +  +E KE++L  HSEKLAI    V
Sbjct: 982  TSHPESKEIYAQLNDLIERLKAK-GYVPDTRLVLRNTDQEHKEQALCSHSEKLAI----V 1036

Query: 634  RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
             G ++ Q    IRV+KNLRVC DCH   K +SKI     V RDA RFH F+ GVCSCGDY
Sbjct: 1037 YGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDY 1096

Query: 694  W 694
            W
Sbjct: 1097 W 1097



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 273/546 (50%), Gaps = 34/546 (6%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SFS V+  QR       C K   +    Q+H  ++K G   +L + N L+ +Y +CG + 
Sbjct: 118 SFSYVNILQR-------CLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFDK+L++N+  WT ++ G+ + G+A+  + ++ +M     +PNE T  + +KA  
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
              +++ G +IH   ++SGF+ +  V  ++++MY KCG I +A  +FD M  +++I+W  
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI G    G   +   LF +MQ  G IP+ +T+ S L A  S G++    ++H   + +G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               ++  +  +LV  Y K G + +AR VFD + ++ + SW+ +I G AQ     EA  L
Sbjct: 351 LALDLR--VGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSL 408

Query: 305 FRQLRERSLQVDGFVLSSMMG--VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
           F Q++      +     S++     A  + +E  K +H +A +     D  + N+++ MY
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG ID+A  +F+ M  ++V++W  ++ G  ++G   EA  +F +M  + + PD   YL
Sbjct: 469 AKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYL 528

Query: 423 AVLSACSHSGLVEESQEYFSR-----LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
           ++L+    +  +E   E         L +D R+       S  +    R G +D+A+ L 
Sbjct: 529 SLLNTHGSTDALEWVNEVHKHAVETGLISDFRVG------SAFIHMYIRCGSIDDARLLF 582

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL-------DGDNPVNYVMMSNIH 530
           + + V+  +  W  ++           GRE   + L++       D    +N ++ +N+ 
Sbjct: 583 DKLSVR-HVTTWNAMIGGA---AQQRCGREALSLFLQMQREGFIPDATTFIN-ILSANVD 637

Query: 531 ADAGSW 536
            +A  W
Sbjct: 638 EEALEW 643



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 174/333 (52%), Gaps = 11/333 (3%)

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           + G   D F++ + L+ C     +    Q+H  +I SG   ++   +A  L+  Y++CG 
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNL--YVANKLLRVYIRCGR 168

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  AR+VFD + +K++  W+++I GYA+  +  +AM ++ ++R+   Q +     S++  
Sbjct: 169 LQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKA 228

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                 ++ GK+IHA+  +     D  V  ++V+MY+KCG I++A  +F++M  +NV++W
Sbjct: 229 CCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW 288

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           TV+I G   +G  +EA  LF +M  +   P+   Y+++L+A + +G +E  +E  S   N
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              +   +   + +V    ++G +D+A+ + + M  +  I  W  ++     HG    G+
Sbjct: 349 -AGLALDLRVGNALVHMYAKSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGR---GQ 403

Query: 507 EVGEILLRLDGD----NPVNYVMMSNIHADAGS 535
           E   + L++  +    N   Y+ + N  A A +
Sbjct: 404 EAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 2/177 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L++  ++H   V  G   DL + N L+ MYAKCG ++ A +VFD M+ER+V
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV 791

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHG 137
            SWT ++ G  Q+G     L  F +M S   KPN ++    + A      V+ G  Q   
Sbjct: 792 FSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLS 851

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAG 193
           M    G E        ++D+  + G + EA      MP +     W A++   V  G
Sbjct: 852 MTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYG 908


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/666 (35%), Positives = 388/666 (58%), Gaps = 12/666 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           VQ+H  ++K+G+ ++LM+ N L+D Y K   +  A  +F  ML ++ V++ +LM G+   
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  +  + LF ++ +S +KP++FT +  + A+  L   + G Q+HG  +K+ F WN  VG
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++D YSK  +++E  ++F  MP    I++N +I  Y   G   +   LFRK+Q     
Sbjct: 280 NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
             +F F + L    S  ++  G QIH   IT G  +  +  +  +LVD Y KC    EA+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQ 397

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           ++FD I  KS + W+++I  Y Q+    E + +F  +R   +  D    +S++   A+ A
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 332 LVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +  G+Q+H+   +  SG  ++V   ++++D Y KCG + +A + F EMP +N V+W  +
Sbjct: 458 SISLGRQLHSLLIR--SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y ++G     +  F++M+    +PD V++L+VLSACSH G VEE+  +F+ +     
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P+ EHY+ +VD L R GR DEA+ L+  MP +PS  +W ++L++CR+H + EL ++  
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635

Query: 510 EILLRL-DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
           + L  + D  +   Y+ MSNI+A AG W+   +++K  R +G++KV   SWVE+  + H 
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D +HP  +KI + +  + K M E+ G+      ALHD+ E  K ESL+ HSE+ AI
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEM-EKKGYKPDTTCALHDVDEVIKIESLKYHSERFAI 754

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
             AL    +N   G  I V KNLR C DCH  IK +S+I++   +VRD++RFH F+ GVC
Sbjct: 755 AFAL----MNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 811 SCGDYW 816



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 245/474 (51%), Gaps = 10/474 (2%)

Query: 36  GALVKMGFSFDLMLNNDLIDM------YAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G LV     FD M   + I +      + K G+++ A  +FD M+ER  VSWT L+ G+L
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q+  +K    L+  M    ++P+  TL T +   G L +    +QIH   +K G+E+N +
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS++D Y K   +  A+++F  M  K  +T+N+++ GY   G +++ + LF ++   G
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P +FTF + L A   L     G Q+HGF++ + F ++V   +  +L+D+Y K   + E
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV--FVGNALLDYYSKHDQVDE 294

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
             ++F  + +   IS++ +I  YA      E+ +LFR+L+        F  ++++ +   
Sbjct: 295 VGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +  G+QIH  A  V +  ++ V N++VDMY KC    EA ++F+ +  K+ V WT +
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAM 414

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y + G  +E + +F  M    V  D   + ++L AC++   +   ++  S L     
Sbjct: 415 ISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGF 474

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           M   +   S ++D+  + G + +A      MP + S++ W  L+SA   +G+++
Sbjct: 475 MS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 22/400 (5%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q+HG ++K  F +++ + N L+D Y+K  +++    +F +M E + +S+  ++  + 
Sbjct: 259 FGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYA 318

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG  K    LF ++  +     +F  +T +  +    ++  G QIH   +  G  +   
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+++DMY+KC    EA ++FD +  KS + W AMI+ YV  G  ++G+ +F  M+  G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLV 268
              D+ TF S L+AC +L S+  G Q+H  LI SGF   +  V +GS L+D Y KCGC+ 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGF---MSNVYSGSALLDTYAKCGCMT 495

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A + F  + +++ +SW++LI  YAQ  N+   +  F+Q+ +   + D     S++   +
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 329 DFALVEQG-------KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
               VE+         QI+    K           S+VD+  + G  DEA +L  EMP +
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFE 609

Query: 382 -NVVTWTVIITG---YGKHGLAKEAVG-LFRKMLLDDVEP 416
            + + W+ ++     +  H LAK+A   LF    L D  P
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP 649



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 35/401 (8%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I  + K G++++A  +FD M  ++ ++W  +I GY+ +  S +   L+  M+
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PD  T  + L   G L +     QIH  +I  G+ Y++  ++  SLVD Y K  C
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL--MVCNSLVDAYCKTHC 190

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A ++F  +  K  ++++SL+ GY+ E    EA+ELF +L    ++   F  ++++  
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                  + G+Q+H +  K     +  V N+++D Y K   +DE  +LF EMP  + +++
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISY 310

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVE 435
            V+IT Y  +G  KE+  LFRK+     +     +  +LS  +           H   + 
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370

Query: 436 ESQEYFSRL----------CN-DKRMKPRIEHYSC--------IVDSLGRAGRLDEAKNL 476
               + SR+          CN DK  +   ++ +C        ++ +  + G+ +E  N+
Sbjct: 371 VGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINV 430

Query: 477 IESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
              M    V    A + ++L AC     + LGR++  +L+R
Sbjct: 431 FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 3/289 (1%)

Query: 3   RVSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           ++ F+    RQ   A  L   + +L L  G Q+H   + +G +F+  + N L+DMYAKC 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
               A  +FD +  ++ V WTA++  ++Q G  +  +++F  M  + V  ++ T ++ ++
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A   L+S+  G Q+H + ++SGF  N   G++++D Y+KCG + +A + F  MP ++ ++
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WNA+I+ Y   G  D  L  F++M + G  PD  +F S L AC   G V      H   +
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALW-HFNSM 570

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLI 289
           T  +  + K     S+VD   + G   EA ++  ++  + S I WSS++
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVL 619



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 60/240 (25%)

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV--------------- 383
           I A+  K     +T  SN  V+ +L+ G +  A ++F++MP KN                
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 384 ----------------VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
                           V+WT++I GY +   +KEA  L+  M    +EPD V  + +LS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 428 CS-----------HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
                        H+ +++   EY   +CN             +VD+  +   L  A  L
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNS------------LVDAYCKTHCLYLASQL 197

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAG 534
            + M  K ++  + +L++     G   L  E  E+ L L   G  P ++   + + A  G
Sbjct: 198 FKHMLNKDTVT-FNSLMTGYSNEG---LNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/684 (36%), Positives = 381/684 (55%), Gaps = 44/684 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM- 104
           +L   N L+   A    ++   ++F  M +R+ VS+ A++ GF   G     + L+  + 
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 105 -GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--- 160
              SSV+P+  T+S  + A+  L     G Q H   ++ GF  N  VG+ ++ MY+K   
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 161 ----------------------------CGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
                                       C  + EA R+F+VM  +  ITW  M+ G+   
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G   + L  FR+M+  G   D++TF S L ACG+L ++  G QIH ++I +   Y     
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTH--YDDNVF 308

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LVD Y KC  +  A   F  +  K++ISW++LI+GY Q     EA+ +F +++   
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDE 370
           +  D F L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLA--LVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  LF+EM   + V+WT ++TGY + G AKE + LF KML  DV+PDGV ++ VLSACS 
Sbjct: 427 AHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSR 486

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +G VE+   YF  +  D  + P  +HY+C++D   R+GRL EA+  I+ MP+ P    W 
Sbjct: 487 AGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWG 546

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           TLLSACR+ GD+E+G+   E LL +D  NP +YV++ ++HA  G+WN+  +LR+  R + 
Sbjct: 547 TLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQ 606

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G SW++   ++H F   D +HP ++ I++ L  +  +M EE G+   V   LHD+
Sbjct: 607 VKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEE-GYKPDVSSVLHDV 665

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            +  K   +  HSEKLAI   L+    +E P   IR+ KNLRVC DCH   K +SKI   
Sbjct: 666 ADTDKVHMVSHHSEKLAIAFGLMFVP-HEMP---IRIVKNLRVCVDCHNATKLISKITGR 721

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRDA RFH+F  GVCSCGD+W
Sbjct: 722 DILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 202/398 (50%), Gaps = 41/398 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV----------- 79
           G Q H  ++++GF  +  + + L+ MYAK G +  A  VFD+M  +NVV           
Sbjct: 159 GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLR 218

Query: 80  --------------------SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
                               +WT ++ GF QNG     L+ F +M    +  +++T  + 
Sbjct: 219 CKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSI 278

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A G LS++E G QIH   +++ ++ N  VG++++DMYSKC  I  A   F  M  K++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           I+W A+I GY   G S++ + +F +MQ  G  PD+FT  S + +C +L S+  G Q H  
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCL 398

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            + SG  + +   ++ +LV  Y KCG + +A R+FD +     +SW++L+ GYAQ     
Sbjct: 399 ALVSGLMHYI--TVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVS 355
           E ++LF ++  + ++ DG     ++   +    VE+G        K    VP  +D   +
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVP--IDDHYT 514

Query: 356 NSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
             ++D+Y + G + EA E   +MP+  + + W  +++ 
Sbjct: 515 -CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 211/493 (42%), Gaps = 103/493 (20%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM-------------------------- 185
           N ++  Y K GR   A R+FD  P  +L T+NA+                          
Sbjct: 45  NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104

Query: 186 -----IAGYVLAGYSDKGLLLFRKMQEHGEI--PDEFTFTSTLKACGSLGSVGGGTQIHG 238
                IAG+   G   + + L+  +   G    P   T ++ + A  +LG    G Q H 
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV---------------- 282
            ++  GF   V   +   LV  Y K G + +A+RVFD ++ K+V                
Sbjct: 165 QILRLGF--GVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMV 222

Query: 283 ---------------ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
                          I+W++++ G+ Q    ++A+  FR++R + + +D +   S++   
Sbjct: 223 EEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTAC 282

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              + +EQGKQIHAY  +     +  V +++VDMY KC  I  A   F  M  KN+++WT
Sbjct: 283 GALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWT 342

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF------ 441
            +I GYG++G ++EAV +F +M  D ++PD     +V+S+C++   +EE  ++       
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVS 402

Query: 442 -------------------------SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
                                     RL ++     ++  ++ +V    + GR  E  +L
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS-WTALVTGYAQFGRAKETIDL 461

Query: 477 IESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN--YVMMSNIHA 531
            E M    VKP    +  +LSAC   G +E G      + +  G  P++  Y  M ++++
Sbjct: 462 FEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYS 521

Query: 532 DAGSWNECERLRK 544
            +G   E E   K
Sbjct: 522 RSGRLKEAEEFIK 534



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 6/274 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G Q+H  +++  +  ++ + + L+DMY+KC  +  A   F +M  +N+
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTAL+ G+ QNG ++  + +F +M    + P++FTL + I +   L+S+E G Q H +
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCL 398

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A++ GY   G + + 
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKET 458

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG-TQIHGFLITSGF-PYSVKTVIAGS 256
           + LF KM      PD  TF   L AC   G V  G +  H      G  P          
Sbjct: 459 IDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYT---C 515

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           ++D Y + G L EA      +      I W +L+
Sbjct: 516 MIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 2/181 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+ML
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M +  VKP+  T    + A      VE G  
Sbjct: 436 FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCS 495

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLA 192
             H M    G          +ID+YS+ GR+ EA      MP     I W  +++   L 
Sbjct: 496 YFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLR 555

Query: 193 G 193
           G
Sbjct: 556 G 556



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 164/420 (39%), Gaps = 92/420 (21%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL----------------------- 276
           +I    P+   T +   L+  Y K G    ARRVFD                        
Sbjct: 30  VILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLD 89

Query: 277 --------IEQKSVISWSSLILGYAQEENLAEAMELFRQLRE--RSLQVDGFVLSSMMGV 326
                   + Q+  +S++++I G++     A A+ L+  L     S++     +S+M+  
Sbjct: 90  DMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMA 149

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-- 384
            +       G+Q H    ++  G++  V + +V MY K GLI +A  +F+EM  KNVV  
Sbjct: 150 ASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMY 209

Query: 385 -----------------------------TWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
                                        TWT ++TG+ ++GL  +A+  FR+M    + 
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIA 269

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY-------SCIVDSLGRAG 468
            D   + ++L+AC     +E+ ++  + +           HY       S +VD   +  
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIR--------THYDDNVFVGSALVDMYSKCR 321

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            +  A+     M  K +I  W  L+     +G  E    V   + R DG +P ++ + S 
Sbjct: 322 SIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQR-DGIDPDDFTLGSV 379

Query: 529 IH--ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG----DDTHPLTEKI 582
           I   A+  S  E  +   LA   GL       ++ V   +   YG     +D H L +++
Sbjct: 380 ISSCANLASLEEGAQFHCLALVSGLMH-----YITVSNALVTLYGKCGSIEDAHRLFDEM 434


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/676 (34%), Positives = 388/676 (57%), Gaps = 7/676 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C+ +  L  G  +H  ++K G+  +  +   L+DMY+KCG    A  VF  + 
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK 376

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + ++V W+AL+    Q G ++  + LF  M      PN++T+ + + A+    +++ G  
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH    K GFE +  V N+++ MY K G +++  ++++ M  + LI+WNA ++G    G 
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D+ L +F  M E G IP+ +TF S L +C  L  V  G Q+H  +I +         + 
Sbjct: 497 YDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQL--DDNNFVC 554

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KC  L +A   F+ +  + + +W+ +I  YAQ     +A+  FRQ+++  ++
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F L+  +   +  A +E G+Q+H+   K     D  V +++VDMY KCG ++EA  L
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +  ++ + W  II GY ++G   +A+  FR ML + + PDGV +  +LSACSH GLV
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE +E+F+ +  D  + P ++H +C+VD LGR G+ DE ++ I+ M +  +  IW+T+L 
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           A ++H +L LG +    L  L  +   +Y+++SNI A  G W++ +R+R L  SKG+KK 
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SWVE + ++H F   D +HP  ++IH  L E+++ +   + +V   +Y LH++ E  
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELA-SIQYVPKTEYVLHNVGETE 913

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+E+LR HSE+LA+G AL+    +    K IR+FKNLR+C DCH+ +K +S I     VV
Sbjct: 914 KKENLRFHSERLALGFALI----STSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVV 969

Query: 675 RDATRFHRFEGGVCSC 690
           RD  RFH F+ G CSC
Sbjct: 970 RDVRRFHHFKNGACSC 985



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 253/479 (52%), Gaps = 4/479 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L+ CS  + LD G Q+H    K+G   DL + + L+D+YAKCGE+  A  +F  M 
Sbjct: 216 LATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP 275

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+N V+W  L+ G+ Q G+    L LFC M    VK NEFTL+T +K      +++ G  
Sbjct: 276 EQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQV 335

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K G+E N  +G  ++DMYSKCG   +A  +F  +    ++ W+A+I      G 
Sbjct: 336 IHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQ 395

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S++ + LF  M+    +P+++T  S L A  + G++  G  IH  +   GF   V   ++
Sbjct: 396 SEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDV--AVS 453

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  Y+K GC+ +  ++++ +  + +ISW++ + G          + +F  + E    
Sbjct: 454 NALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI 513

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + +   S++G  +    V  G+Q+HA+  K     +  V  +++DMY KC  +++A   
Sbjct: 514 PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVA 573

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN + V+++ TWTVIIT Y +    ++A+  FR+M  + V+P+       LS CS    +
Sbjct: 574 FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL 633

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           E  Q+  S +     +       S +VD   + G ++EA+ L E++  + +IA W T++
Sbjct: 634 EGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEALIRRDTIA-WNTII 690



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 229/428 (53%), Gaps = 2/428 (0%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+V +S   + +  +  LR C+    L     +HG +VK   + D  L   L+++YAKC 
Sbjct: 102 NQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR 161

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
               A  V  KM +R+VVSWTAL+ G +  G A   + LF +M +  + PNEFTL+T +K
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A  +  +++ G Q+H    K G   +  VG++++D+Y+KCG I  A++MF  MP ++ +T
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN ++ GY   G     L LF  M E     +EFT T+ LK C +  ++  G  IH  +I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G  Y     I   LVD Y KCG  ++A  VF  I++  ++ WS+LI    Q+    E+
Sbjct: 342 KCG--YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           ++LF  +R      + + + S++    +   ++ G+ IHA   K     D +VSN++V M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y+K G + + T+L+  M  +++++W   ++G    G+    + +F  ML +   P+   +
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 422 LAVLSACS 429
           +++L +CS
Sbjct: 520 ISILGSCS 527



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 7/322 (2%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           ++S L+ C S  S+G    IHG ++      +  + +  SLV+ Y KC     AR V   
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVI--NPDSHLWVSLVNVYAKCRYSAYARLVLAK 172

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  + V+SW++LI G   E    +++ LF++++   +  + F L++ +   +    ++ G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           KQ+HA A K+   LD  V +++VD+Y KCG I+ A+++F  MP +N VTW V++ GY + 
Sbjct: 233 KQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G     + LF  M+  DV+ +      VL  C++S  +++ Q   S +   K      E 
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII--KCGYEGNEF 350

Query: 457 YSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
             C +VD   + G   +A  + +++  KP I +W  L++     G  E   ++   L+RL
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFH-LMRL 408

Query: 516 DGDNPVNYVMMSNIHADAGSWN 537
               P  Y + S + A   + N
Sbjct: 409 GDTLPNQYTICSLLSAATNTGN 430


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/742 (35%), Positives = 398/742 (53%), Gaps = 75/742 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +         LH  ++K     +  L N+LI  YAK G +  AC VFD+M   N+
Sbjct: 16  LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75

Query: 79  VSWTALMCGFLQNGNAKACLSLF--------------------CQMGSSSVKP------- 111
            SW  ++  + + G       LF                    C +   SVK        
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135

Query: 112 ------NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                 N  T ST +  +     V+ G QIHG  +K GF     VG+ ++DMYSK G I+
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 166 EAARMFDVMPAKSL-------------------------------ITWNAMIAGYVLAGY 194
            A ++FD +P K++                               I+W +MI G+   G 
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGL 255

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               + +FR+M+      D++TF S L ACG + ++  G Q+H ++I +   Y     +A
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD--YKDNIFVA 313

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LVD Y KC  +  A  VF  +  K+V+SW+++++GY Q     EA++ F  +++  ++
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEAT 372
            D F L S++   A+ A +E+G Q HA A  + SGL +  +VSN++V +Y KCG I+++ 
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARA--LTSGLISFITVSNALVTLYGKCGSIEDSH 431

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            LFNE+  K+ VTWT +++GY + G A E +GLF  ML   ++PD V ++ VLSACS +G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           LVE+  + F  + N+  + P  +HY+C++D   RAGR++EA+N I  MP  P    W TL
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           LS+CR +G++++G+   E L+ LD  N  +YV++S+++A  G W E  RLRK  R KGL+
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           K  G SW++   ++H F   D ++P +++I+  L ++  +M +E G+V  +   LHD+ +
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKE-GYVPDMNSVLHDVGD 670

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
             K + L  HSEKLAI   L    L   PG  IRV KNLRVC DCH   K +SKI     
Sbjct: 671 SEKIKMLNHHSEKLAIAFGL----LFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREI 726

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
           +VRD  RFH F+ G CSCGD+W
Sbjct: 727 LVRDTARFHLFKDGTCSCGDFW 748



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 236/465 (50%), Gaps = 56/465 (12%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR++FS +         L   SK   +  G Q+HG +VK GF   + + + L+DMY+K 
Sbjct: 141 LNRITFSTL---------LILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 61  GEMNGACAVFDKMLERNVV-------------------------------SWTALMCGFL 89
           G ++ A  VFD++ E+NVV                               SWT+++ GF 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG  +  + +F +M   +++ +++T  + + A G + +++ G Q+H   +++ ++ N  
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V ++++DMY KC  I  A  +F  M  K++++W AM+ GY   GYS++ +  F  MQ++G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+FT  S + +C +L S+  G Q H   +TSG    +   ++ +LV  Y KCG + +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFI--TVSNALVTLYGKCGSIED 429

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + R+F+ I  K  ++W++L+ GYAQ     E + LF  +    L+ D      ++   + 
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNS---IVDMYLKCGLIDEATELFNEMPV-KNVVT 385
             LVE+G QI  + + +       + +    ++D++ + G I+EA    N+MP   + ++
Sbjct: 490 AGLVEKGNQI--FESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS 547

Query: 386 WTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           W  +++    YG   + K A        L +++P   A   +LS+
Sbjct: 548 WATLLSSCRFYGNMDIGKWAAE-----FLMELDPHNTASYVLLSS 587



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 184/436 (42%), Gaps = 80/436 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           + + LK C    +      +H  +I +  PY  +T +  +L+  Y K G +  A +VFD 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKT-LPYP-ETFLLNNLISSYAKLGSIPYACKVFDQ 69

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRER------------------------- 311
           +   ++ SW++++  Y++   ++E   LF  +  R                         
Sbjct: 70  MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 312 --------SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
                   S  ++    S+++ + +    V+ G+QIH +  K        V + +VDMY 
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189

Query: 364 KCGLIDEATELFNEMPVKNVV-------------------------------TWTVIITG 392
           K G+I  A ++F+E+P KNVV                               +WT +ITG
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           + ++GL ++A+ +FR+M L++++ D   + +VL+AC     ++E ++  + +      K 
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKD 308

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            I   S +VD   +   +  A+ + + M  K ++  W  +L     +G  E   +    +
Sbjct: 309 NIFVASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDM 367

Query: 513 LRLDGDNPVNYVMMSNIH--ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +  G  P ++ + S I   A+  S  E  +    A + GL      S++ V   +   Y
Sbjct: 368 QKY-GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI-----SFITVSNALVTLY 421

Query: 571 GG----DDTHPLTEKI 582
           G     +D+H L  +I
Sbjct: 422 GKCGSIEDSHRLFNEI 437


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/673 (36%), Positives = 397/673 (58%), Gaps = 12/673 (1%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  G ++HG ++  G   F + + N L++MYAKCG +  A  VF  M +++ VSW +++ 
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G  QNG     +  +  M    + P  FTL +++ +   L   + G QIHG  +K G + 
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKM 205
           N  V N+++ +Y++ G +NE  ++F  MP    ++WN++I     +  S  + ++ F   
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           Q  G+  +  TF+S L A  SL     G QIHG  + +       T    +L+  Y KCG
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT--ENALIACYGKCG 566

Query: 266 CLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            +    ++F  + E++  ++W+S+I GY   E LA+A++L   + +   ++D F+ ++++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             FA  A +E+G ++HA + +     D  V +++VDMY KCG +D A   FN MPV+N  
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           +W  +I+GY +HG  +EA+ LF  M LD    PD V ++ VLSACSH+GL+EE  ++F  
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-D 501
           + +   + PRIEH+SC+ D LGRAG LD+ ++ IE MP+KP++ IW+T+L A CR +G  
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
            ELG++  E+L +L+ +N VNYV++ N++A  G W +  + RK  +   +KK AG SWV 
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           +   +H F  GD +HP  + I++ L E+ ++M++  G+V    +AL+D+++E+KEE L  
Sbjct: 867 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDA-GYVPQTGFALYDLEQENKEEILSY 925

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSEKLA+   L     +  P   IR+ KNLRVCGDCH   K +SKI     ++RD+ RFH
Sbjct: 926 HSEKLAVAFVLAAQRSSTLP---IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 250/502 (49%), Gaps = 18/502 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+   + K G   DL + + L+  +AK G ++ A  VF++M  RN V+   LM G ++  
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288

Query: 93  NAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGF-EWN 147
             +    LF  M S   V P  + +  +      L+    ++ G ++HG  + +G  ++ 
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +GN +++MY+KCG I +A R+F  M  K  ++WN+MI G    G   + +  ++ M+ 
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           H  +P  FT  S+L +C SL     G QIHG  +  G   +V   ++ +L+  Y + G L
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS--VSNALMTLYAETGYL 466

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQ-EENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            E R++F  + +   +SW+S+I   A+ E +L EA+  F   +    +++    SS++  
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVT 385
            +  +  E GKQIH  A K     + +  N+++  Y KCG +D   ++F+ M   ++ VT
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS--- 442
           W  +I+GY  + L  +A+ L   ML      D   Y  VLSA +    +E   E  +   
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           R C    ++  +   S +VD   + GRLD A     +MPV+ S + W +++S    HG  
Sbjct: 647 RAC----LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQG 701

Query: 503 ELGREVGEILLRLDGDNPVNYV 524
           E   ++ E  ++LDG  P ++V
Sbjct: 702 EEALKLFET-MKLDGQTPPDHV 722



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 234/480 (48%), Gaps = 30/480 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            H  L K     D+ L N+LI+ Y + G+   A  VFD+M  RN VSW  ++ G+ +NG 
Sbjct: 23  FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQIHGMCMKSGFEWNPVVG 151
            K  L     M    +  N++   + ++A   + SV    G QIHG+  K  +  + VV 
Sbjct: 83  HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142

Query: 152 NSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           N +I MY KC G +  A   F  +  K+ ++WN++I+ Y  AG       +F  MQ  G 
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202

Query: 211 IPDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            P E+TF S +    SL    V    QI   +  SG    +   +   LV  + K G L 
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL--FVGSGLVSAFAKSGSLS 260

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMMGVF 327
            AR+VF+ +E ++ ++ + L++G  +++   EA +LF  +     +  + +V+  ++  F
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSF 318

Query: 328 ADFALVEQ-----GKQIHAYAAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +++L E+     G+++H +   + +GL      + N +V+MY KCG I +A  +F  M 
Sbjct: 319 PEYSLAEEVGLKKGREVHGHV--ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            K+ V+W  +ITG  ++G   EAV  ++ M   D+ P     ++ LS+C+     +  Q+
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
                 + + +K  I+    + ++L       G L+E + +  SMP    ++ W +++ A
Sbjct: 437 -----IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 200/392 (51%), Gaps = 10/392 (2%)

Query: 8   LVSERQRLADSLRCCSK--NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMN 64
           + S +      LR C +  ++ + +G Q+HG + K+ ++ D +++N LI MY KC G + 
Sbjct: 98  IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A   F  +  +N VSW +++  + Q G+ ++   +F  M     +P E+T  + +  + 
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217

Query: 125 VLSSVENGMQIHGMC--MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
            L+  +  +    MC   KSG   +  VG+ ++  ++K G ++ A ++F+ M  ++ +T 
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGG---GTQIHG 238
           N ++ G V   + ++   LF  M    ++ P+ +    +     SL    G   G ++HG
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            +IT+G        I   LV+ Y KCG + +ARRVF  +  K  +SW+S+I G  Q    
Sbjct: 338 HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+E ++ +R   +    F L S +   A     + G+QIH  + K+   L+ SVSN++
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           + +Y + G ++E  ++F+ MP  + V+W  II
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 205/428 (47%), Gaps = 18/428 (4%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF+L+S       SL  C+       G Q+HG  +K+G   ++ ++N L+ +YA+ G +N
Sbjct: 415 SFTLIS-------SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKA 122
               +F  M E + VSW +++ G L         ++ C + +     K N  T S+ + A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSII-GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLIT 181
              LS  E G QIHG+ +K+         N++I  Y KCG ++   ++F  M   +  +T
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN+MI+GY+      K L L   M + G+  D F + + L A  S+ ++  G ++H   +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +     V  V+  +LVD Y KCG L  A R F+ +  ++  SW+S+I GYA+     EA
Sbjct: 647 RACLESDV--VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704

Query: 302 MELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
           ++LF  ++ +     D      ++   +   L+E+G + H  +     GL   + +   +
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCM 763

Query: 359 VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
            D+  + G +D+  +   +MP+K NV+ W  ++    +    K  +G     +L  +EP+
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE 823

Query: 418 GVAYLAVL 425
                 +L
Sbjct: 824 NAVNYVLL 831



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 179/380 (47%), Gaps = 22/380 (5%)

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            H    K+  + +  + N++I+ Y + G    A ++FD MP ++ ++W  +++GY   G 
Sbjct: 23  FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG--GGTQIHGFLITSGFPYSVKTV 252
             + L+  R M + G   +++ F S L+AC  +GSVG   G QIHG +      Y+V  V
Sbjct: 83  HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK--LSYAVDAV 140

Query: 253 IAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           ++  L+  Y KC G +  A   F  IE K+ +SW+S+I  Y+Q  +   A  +F  ++  
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200

Query: 312 SLQVDGFVLSSMMGVF-----ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
             +   +   S++         D  L+E   QI     K     D  V + +V  + K G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVL 425
            +  A ++FN+M  +N VT   ++ G  +    +EA  LF  M  + DV P+  +Y+ +L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILL 315

Query: 426 SACSHSGLVEE-----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           S+     L EE      +E    +     +   +   + +V+   + G + +A+ +   M
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375

Query: 481 PVKPSIAIWQTLLSACRVHG 500
             K S++ W ++++    +G
Sbjct: 376 TDKDSVS-WNSMITGLDQNG 394


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/665 (35%), Positives = 389/665 (58%), Gaps = 9/665 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  + K+GF  D  +   LID Y+ CG    A  VFD +  +++VSWT ++  +++
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  L LF +M     KPN FT ++ +KA   L     G  +HG   K+ +     V
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G  +ID+Y K G +++A ++F+ MP   +I W+ MIA Y  +  S++ + +F +M+    
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           +P++FT  S L+AC SL  +  G QIH  ++  G   +V   ++ +L+D Y KCG +  +
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNV--FVSNALMDMYAKCGRMENS 401

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            ++F      + +SW+++I+GY Q  N  +A+ LF+ + E  +Q      SS++   A  
Sbjct: 402 LQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGI 461

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +E G QIH+ + K     +T V N+++DMY KCG I +A  +F+ +   + V+W  +I
Sbjct: 462 AALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMI 521

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +GY  HGL  EA+  F  ML  + +PD V ++ +LSACS++GL++  Q YF  +  +  +
Sbjct: 522 SGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDI 581

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C+V  LGR+G LD+A  L+  +P +PS+ +W+ LLSAC +H D+ELGR   +
Sbjct: 582 EPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQ 641

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L ++ ++   +V++SNI+A+A  W     +R   + KG++K  G SW+E    +H+F 
Sbjct: 642 RVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFS 701

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP T+ I+ +L  +  + + E G+V      L D+++  KE+ L VHSE+LA+  
Sbjct: 702 VGDTSHPDTKLINGMLEWLNMKARNE-GYVPDFSSVLLDVEDVDKEQRLWVHSERLALAY 760

Query: 631 ALVRGGLNEQPG-KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
            L+R      P    +R+ KNLR+C DCH  IK +SKI++   ++RD  RFH F  G+CS
Sbjct: 761 GLIR-----TPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICS 815

Query: 690 CGDYW 694
           CGDYW
Sbjct: 816 CGDYW 820



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 246/482 (51%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +N     G  LH  ++K G   DL  NN L++ Y K   +  A  +FD+M +RN 
Sbjct: 51  LQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNT 110

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+  L+ G+ Q       + LF ++     + N F  ST +K        + G  +H  
Sbjct: 111 VSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHAC 170

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K GF+ +  VG ++ID YS CG    A ++FD +  K +++W  M+A YV     ++ 
Sbjct: 171 VYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEES 230

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +M+  G  P+ FTF S LKAC  L     G  +HG    +   Y  +  +   L+
Sbjct: 231 LKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTS--YLEELFVGVELI 288

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y+K G + +A +VF+ + +  VI WS +I  YAQ E   EA+E+F ++R   +  + F
Sbjct: 289 DLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQF 348

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L+S++   A    ++ G QIH +  KV   ++  VSN+++DMY KCG ++ + +LF+E 
Sbjct: 349 TLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSES 408

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P    V+W  +I GY + G  ++A+ LF+ ML   V+   V Y +VL AC+    +E   
Sbjct: 409 PNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGS 468

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  S        K  +   + ++D   + G + +A+ + + +     ++ W  ++S   V
Sbjct: 469 QIHSLSVKTIYDKNTVVG-NALIDMYAKCGNIKDARLVFDMLREHDQVS-WNAMISGYSV 526

Query: 499 HG 500
           HG
Sbjct: 527 HG 528



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 226/417 (54%), Gaps = 12/417 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L+ C    + + G  +HG   K  +  +L +  +LID+Y K G+++ A  VF++M 
Sbjct: 249 FASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP 308

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + +V+ W+ ++  + Q+  ++  + +FC+M    V PN+FTL++ ++A   L  ++ G Q
Sbjct: 309 KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQ 368

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K G + N  V N+++DMY+KCGR+  + ++F   P  + ++WN +I GYV AG 
Sbjct: 369 IHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGN 428

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            +K L+LF+ M E      E T++S L+AC  + ++  G+QIH   + +   Y   TV+ 
Sbjct: 429 GEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKT--IYDKNTVVG 486

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG + +AR VFD++ +   +SW+++I GY+      EA++ F  + E   +
Sbjct: 487 NALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS----NSIVDMYLKCGLIDE 370
            D      ++   ++  L+++G+   AY   +    D          +V +  + G +D+
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQ---AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDK 603

Query: 371 ATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           A +L +E+P + +V+ W  +++    H   +  +G      + ++EP+  A   +LS
Sbjct: 604 AAKLVHEIPFEPSVMVWRALLSACVIHNDVE--LGRISAQRVLEIEPEDEATHVLLS 658


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/664 (36%), Positives = 393/664 (59%), Gaps = 9/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  L+K     D ++   +++  A      ++ A ++F+ + +    ++  ++ G   
Sbjct: 39  QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAF 98

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
             +    L LF +M   SV+ ++FT S+ +KA   + ++  G Q+H + +KSGF+ N  V
Sbjct: 99  KRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFV 158

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I MY+ CG+I  A  +FD MP +S++ WN+M++GY   G  D+ + LFRK+ E   
Sbjct: 159 ENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRI 218

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D+ T  S L ACG L ++  G  I  ++++ G   +    +  SL+D Y KCG +  A
Sbjct: 219 EFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN--NTLTTSLIDMYAKCGQVDTA 276

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD ++++ V++WS++I GYAQ +   EA+ LF ++++ ++  +   + S++   A  
Sbjct: 277 RKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAML 336

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
              E GK +H Y  K    L  ++   ++D Y KCG ID + E+F EM  KNV TWT +I
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G   +G  K A+  F  ML +DV+P+ V ++ VLSACSH+ LV++ +  F+ +  D  +
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDI 456

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +PRIEHY C+VD LGRAG L+EA   I++MP  P+  +W+TLL++CR H ++E+  +  E
Sbjct: 457 EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            + RL+  +  +Y+++SN +A  G   +  R+R L + K +KK+ G S +E+D  +H F+
Sbjct: 517 HITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFF 576

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D  H  +++IH  L +M K++K  LG+V     A  + +EESKE S+  HSEKLAI  
Sbjct: 577 SEDGEHKHSKEIHDALDKMMKQIK-RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAY 635

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+R      P   IR+ KNLR+C DCH   K +S++ + + +VRD  RFH F+ G+CSC
Sbjct: 636 GLIRTS----PRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSC 691

Query: 691 GDYW 694
            DYW
Sbjct: 692 NDYW 695



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 205/393 (52%), Gaps = 6/393 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  ++   +  L+ CS+   L  G Q+H  ++K GF  +  + N LI MYA CG++  A
Sbjct: 116 SVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVA 175

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VFD M ER++V+W +++ G+ +NG     + LF ++    ++ ++ T+ + + A G L
Sbjct: 176 RHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++E G  I    +  G   N  +  S+IDMY+KCG+++ A ++FD M  + ++ W+AMI
Sbjct: 236 ANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY  A    + L LF +MQ+    P+E T  S L +C  LG+   G  +H ++      
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +V   +   L+DFY KCG +  +  VF  +  K+V +W++LI G A       A+E F 
Sbjct: 356 LTV--TLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 413

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
            + E  ++ +      ++   +   LV+QG+ +   + +    ++  + +   +VD+  +
Sbjct: 414 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN-SMRRDFDIEPRIEHYGCMVDILGR 472

Query: 365 CGLIDEATELFNEMPV-KNVVTWTVIITGYGKH 396
            G ++EA +  + MP   N V W  ++     H
Sbjct: 473 AGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH 505


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/666 (35%), Positives = 388/666 (58%), Gaps = 12/666 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           VQ+H  ++K+G+ ++LM+ N L+D Y K   +  A  +F  ML ++ V++ +LM G+   
Sbjct: 160 VQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNE 219

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  +  + LF ++ +S +KP++FT +  + A+  L   + G Q+HG  +K+ F WN  VG
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++D YSK  +++E  ++F  MP    I++N +I  Y   G   +   LFRK+Q     
Sbjct: 280 NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
             +F F + L    S  ++  G QIH   IT G  +  +  +  +LVD Y KC    EA+
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDKEAQ 397

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           ++FD I  KS + W+++I  Y Q+    E + +F  +R   +  D    +S++   A+ A
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 332 LVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +  G+Q+H+   +  SG  ++V   ++++D Y KCG + +A + F EMP +N V+W  +
Sbjct: 458 SISLGRQLHSLLIR--SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y ++G     +  F++M+    +PD V++L+VLSACSH G VEE+  +F+ +     
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYE 575

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P+ EHY+ +VD L R GR DEA+ L+  MP +PS  +W ++L++CR+H + EL ++  
Sbjct: 576 VTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAA 635

Query: 510 EILLRL-DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
           + L  + D  +   Y+ MSNI+A AG W+   +++K  R +G++KV   SWVE+  + H 
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D +HP  +KI + +  + K M E+ G+      ALHD+ E  K ESL+ HSE+ AI
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEM-EKKGYKPDTTCALHDVDEVIKIESLKYHSERFAI 754

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
             AL    +N   G  I V KNLR C DCH  IK +S+I++   +VRD++RFH F+ GVC
Sbjct: 755 AFAL----MNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 811 SCGDYW 816



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 245/474 (51%), Gaps = 10/474 (2%)

Query: 36  GALVKMGFSFDLMLNNDLIDM------YAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G LV     FD M   + I +      + K G+++ A  +FD M+ER  VSWT L+ G+L
Sbjct: 57  GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYL 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q+  +K    L+  M    ++P+  TL T +   G L +    +QIH   +K G+E+N +
Sbjct: 117 QSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS++D Y K   +  A+++F  M  K  +T+N+++ GY   G +++ + LF ++   G
Sbjct: 177 VCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSG 236

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P +FTF + L A   L     G Q+HGF++ + F ++V   +  +L+D+Y K   + E
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV--FVGNALLDYYSKHDQVDE 294

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
             ++F  + +   IS++ +I  YA      E+ +LFR+L+        F  ++++ +   
Sbjct: 295 VGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +  G+QIH  A  V +  ++ V N++VDMY KC    EA ++F+ +  K+ V WT +
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAM 414

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y + G  +E + +F  M    V  D   + ++L AC++   +   ++  S L     
Sbjct: 415 ISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGF 474

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           M   +   S ++D+  + G + +A      MP + S++ W  L+SA   +G+++
Sbjct: 475 MS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS-WNALISAYAQNGNVD 526



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 22/400 (5%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q+HG ++K  F +++ + N L+D Y+K  +++    +F +M E + +S+  ++  + 
Sbjct: 259 FGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYA 318

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG  K    LF ++  +     +F  +T +  +    ++  G QIH   +  G  +   
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+++DMY+KC    EA ++FD +  KS + W AMI+ YV  G  ++G+ +F  M+  G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLV 268
              D+ TF S L+AC +L S+  G Q+H  LI SGF   +  V +GS L+D Y KCGC+ 
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGF---MSNVYSGSALLDTYAKCGCMT 495

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A + F  + +++ +SW++LI  YAQ  N+   +  F+Q+ +   + D     S++   +
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 329 DFALVEQG-------KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
               VE+         QI+    K           S+VD+  + G  DEA +L  EMP +
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREH------YTSMVDVLCRNGRFDEAEKLMTEMPFE 609

Query: 382 -NVVTWTVIITG---YGKHGLAKEAVG-LFRKMLLDDVEP 416
            + + W+ ++     +  H LAK+A   LF    L D  P
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP 649



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 35/401 (8%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I  + K G++++A  +FD M  ++ ++W  +I GY+ +  S +   L+  M+
Sbjct: 73  NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PD  T  + L   G L +     QIH  +I  G+ Y++  ++  SLVD Y K  C
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNL--MVCNSLVDAYCKTHC 190

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A ++F  +  K  ++++SL+ GY+ E    EA+ELF +L    ++   F  ++++  
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                  + G+Q+H +  K     +  V N+++D Y K   +DE  +LF EMP  + +++
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISY 310

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVE 435
            V+IT Y  +G  KE+  LFRK+     +     +  +LS  +           H   + 
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370

Query: 436 ESQEYFSRL----------CN-DKRMKPRIEHYSC--------IVDSLGRAGRLDEAKNL 476
               + SR+          CN DK  +   ++ +C        ++ +  + G+ +E  N+
Sbjct: 371 VGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINV 430

Query: 477 IESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
              M    V    A + ++L AC     + LGR++  +L+R
Sbjct: 431 FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 3/289 (1%)

Query: 3   RVSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           ++ F+    RQ   A  L   + +L L  G Q+H   + +G +F+  + N L+DMYAKC 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
               A  +FD +  ++ V WTA++  ++Q G  +  +++F  M  + V  ++ T ++ ++
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A   L+S+  G Q+H + ++SGF  N   G++++D Y+KCG + +A + F  MP ++ ++
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WNA+I+ Y   G  D  L  F++M + G  PD  +F S L AC   G V      H   +
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALW-HFNSM 570

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLI 289
           T  +  + K     S+VD   + G   EA ++  ++  + S I WSS++
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVL 619



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 60/240 (25%)

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV--------------- 383
           I A+  K     +T  SN  V+ +L+ G +  A ++F++MP KN                
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 384 ----------------VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
                           V+WT++I GY +   +KEA  L+  M    +EPD V  + +LS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 428 CS-----------HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
                        H+ +++   EY   +CN             +VD+  +   L  A  L
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNS------------LVDAYCKTHCLYLASQL 197

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAG 534
            + M  K ++  + +L++     G   L  E  E+ L L   G  P ++   + + A  G
Sbjct: 198 FKHMLNKDTVT-FNSLMTGYSNEG---LNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/679 (35%), Positives = 387/679 (56%), Gaps = 18/679 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L CC           +H    K+G   +  + + LID Y+ CG ++ A  VFD ++ 
Sbjct: 165 APGLTCC-----------IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIW 213

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           ++ V+WTA++  + +N   +  L+ F +M  +  KPN F L++ +KA+  LSS   G  I
Sbjct: 214 KDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGI 273

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG  +K+  +  P VG +++DMY+KCG I +A  +F+++P   +I W+ +I+ Y  +  +
Sbjct: 274 HGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQN 333

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++   +F +M     +P+EF+ +  L+AC ++  +  G QIH  +I  G  Y  +  +  
Sbjct: 334 EQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLG--YESELFVGN 391

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KC  +  +  +F  +   + +SW+++I+GY Q     +A+ +F+++R   +  
Sbjct: 392 ALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLS 451

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
                SS++   A+ A ++   QIH+   K     DT V NS++D Y KCG I +A ++F
Sbjct: 452 TQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVF 511

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
             +   +VV+W  II+GY  HG A +A+ LF +M   D +P+ V ++A+LS C  +GLV 
Sbjct: 512 ESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVN 571

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +    F+ +  D R+KP ++HY+CIV  LGRAGRL++A   I  +P  PS  +W+ LLS+
Sbjct: 572 QGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSS 631

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C VH ++ LG+   E +L ++  +   YV++SN++A AG  ++   LRK  R+ G+KK  
Sbjct: 632 CVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEV 691

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SWVE+  E+H F  G   HP    I+ +L  +  +   E G+V  +   LHD+ EE K
Sbjct: 692 GLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASRE-GYVPDINVVLHDVDEEEK 750

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
              L VHSE+LA+   L        PG  IR+ KNLR C DCH   K +SKI++   VVR
Sbjct: 751 ARMLWVHSERLALAYGLSM----TPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVR 806

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F+ G+CSCGDYW
Sbjct: 807 DINRFHHFDEGICSCGDYW 825



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 257/511 (50%), Gaps = 7/511 (1%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +H  +V+ G     D    N L+++YAK G +  A  +FD M ERN+VS+  L+ G+
Sbjct: 66  GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
              G  +    LF ++     + N F L+T +K    + +      IH    K G + N 
Sbjct: 126 ALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNA 185

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG+S+ID YS CG ++ A  +FD +  K  +TW AM++ Y      +  L  F KM+  
Sbjct: 186 FVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMA 245

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ F  TS LKA   L S   G  IHG  + +      +  + G+L+D Y KCG + 
Sbjct: 246 GAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT--LCDTEPHVGGALLDMYAKCGYIE 303

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR VF++I    VI WS LI  YAQ     +A E+F ++   S+  + F LS ++   A
Sbjct: 304 DARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACA 363

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + A ++ G+QIH    K+    +  V N+++D+Y KC  ++ + E+F  +   N V+W  
Sbjct: 364 NVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNT 423

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           II GY + G A++A+ +F++M    V    V + +VL AC+++  ++ + +  S +    
Sbjct: 424 IIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKST 483

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                I   S ++D+  + G + +A  + ES+ ++  +  W  ++S   +HG      E+
Sbjct: 484 FNNDTIVCNS-LIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALEL 541

Query: 509 GEILLRLDG-DNPVNYVMMSNIHADAGSWNE 538
              + + D   N V +V + ++    G  N+
Sbjct: 542 FNRMNKSDTKPNDVTFVALLSVCGSTGLVNQ 572



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 136/230 (59%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+V     L+  L+ C+    LD G Q+H  ++K+G+  +L + N L+D+YAKC  M  +
Sbjct: 347 SVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENS 406

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + + N VSW  ++ G+ Q+G A+  LS+F +M ++ V   + T S+ ++A    
Sbjct: 407 LEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANT 466

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S+++ +QIH +  KS F  + +V NS+ID Y+KCG I +A ++F+ +    +++WNA+I
Sbjct: 467 ASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAII 526

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +GY L G +   L LF +M +    P++ TF + L  CGS G V  G  +
Sbjct: 527 SGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSL 576



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 143/286 (50%), Gaps = 10/286 (3%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +     L+ C + G    G  +H  ++  G    + T  A  L++ Y K G L  ARR
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++++S+ +L+ GYA      EA  LFR+L+    +V+ FVL++++ V      
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
                 IHA A K+    +  V +S++D Y  CG +  A  +F+ +  K+ VTWT +++ 
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA--CSHSGLVEESQE--YFSRLCNDK 448
           Y ++ + ++A+  F KM +   +P+     +VL A  C  S ++ +         LC+  
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD-- 283

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             +P +     ++D   + G +++A+ + E +P    + +W  L+S
Sbjct: 284 -TEPHVG--GALLDMYAKCGYIEDARTVFEIIP-HDDVILWSFLIS 325


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/670 (37%), Positives = 395/670 (58%), Gaps = 13/670 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++D G ++H   VK G    + + N L++MYAKCG +  A  VF  M  R++VSW  LM 
Sbjct: 220 MVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMA 279

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G + NG+    L LF    SS     + T +T IK    +  +    Q+H   +K GF  
Sbjct: 280 GLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHS 339

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
              V  +++D YSK G++  A  +F +M  ++++++W AMI G +  G       LF +M
Sbjct: 340 YGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRM 399

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +E G  P++FT+++ L A  S+ S+    QIH  +I +   Y   +++  +L+  Y K  
Sbjct: 400 REDGVAPNDFTYSTILTA--SVASLP--PQIHAQVIKTN--YECTSIVGTALLASYSKLC 453

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
              EA  +F +I+QK V+SWS+++  YAQ  +   A  +F ++    L+ + F +SS++ 
Sbjct: 454 NTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVID 513

Query: 326 VFAD-FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             A   A V+ G+Q HA + K        VS+++V MY + G I+ A  +F     +++V
Sbjct: 514 ACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLV 573

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +++GY +HG +++A+ +FR+M  + +E DGV +L+V+  C+H+GLVEE Q YF  +
Sbjct: 574 SWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSM 633

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D  + P +EHY+C+VD   RAG+LDEA +LIE M       +W+TLL AC+VH ++EL
Sbjct: 634 ARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVEL 693

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G+   E LL L+  +   YV++SNI++ AG W E + +RKL  +K +KK AG SW+++  
Sbjct: 694 GKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKN 753

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
           ++H F   D +HPL+E+I+  L  M  ++K+E G+     +ALH++ EE KE  L +HSE
Sbjct: 754 KVHSFIASDKSHPLSEQIYAKLRAMTTKLKQE-GYCPDTSFALHEVAEEQKEAMLAMHSE 812

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LA+   L+       PG  + +FKNLRVCGDCH  IK +SKI     V+RD +RFH F 
Sbjct: 813 RLALAFGLI----ATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFN 868

Query: 685 GGVCSCGDYW 694
            GVCSCGD+W
Sbjct: 869 SGVCSCGDFW 878



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 263/528 (49%), Gaps = 17/528 (3%)

Query: 31  GVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLHG  ++ G    D+ +   L+DMY K   +     VF+ M +RNVV+WT+L+ G++
Sbjct: 122 GKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYI 181

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q+G     + LF +M +  V PN  T ++ +        V+ G ++H   +K G      
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+++MY+KCG + EA  +F  M  + +++WN ++AG VL G+  + L LF   +   
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSI 301

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +  + T+ + +K C ++  +G   Q+H  ++  GF +S   V+  +L+D Y K G L  
Sbjct: 302 TMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGF-HSYGNVMT-ALMDAYSKAGQLGN 359

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A  +F L+   ++V+SW+++I G  Q  ++  A  LF ++RE  +  + F  S+++    
Sbjct: 360 ALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA-- 417

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             ++     QIHA   K      + V  +++  Y K    +EA  +F  +  K+VV+W+ 
Sbjct: 418 --SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSA 475

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++T Y + G +  A  +F KM +  ++P+     +V+ AC+      +    F  +    
Sbjct: 476 MLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKH 535

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLEL 504
           R    +   S +V    R G ++ A+ + E    +  ++ W ++LS    HG     L++
Sbjct: 536 RCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVS-WNSMLSGYAQHGYSQKALDV 594

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER-LRKLARSKGL 551
            R++    + +DG   ++ +M     A AG   E +R    +AR  G+
Sbjct: 595 FRQMEAEGIEMDGVTFLSVIMGC---AHAGLVEEGQRYFDSMARDYGI 639



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 238/457 (52%), Gaps = 19/457 (4%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           +R S +++++    A  ++ C+    L    QLH +++K GF     +   L+D Y+K G
Sbjct: 297 SRSSITMLTQ-STYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAG 355

Query: 62  EMNGACAVFDKML-ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           ++  A  +F  M   +NVVSWTA++ G +QNG+     +LF +M    V PN+FT ST +
Sbjct: 356 QLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTIL 415

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            AS  ++S+    QIH   +K+ +E   +VG +++  YSK     EA  +F ++  K ++
Sbjct: 416 TAS--VASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVV 471

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS-LGSVGGGTQIHGF 239
           +W+AM+  Y  AG SD    +F KM  HG  P+EFT +S + AC S    V  G Q H  
Sbjct: 472 SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAI 531

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            I      ++   ++ +LV  Y + G +  A+ +F+    + ++SW+S++ GYAQ     
Sbjct: 532 SIKHRCHDAL--CVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQ 589

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           +A+++FRQ+    +++DG    S++   A   LVE+G++     A+   G+  ++ +   
Sbjct: 590 KALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMAR-DYGITPTMEHYAC 648

Query: 358 IVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           +VD+Y + G +DEA  L   M  P   +V W  ++     H   +  +G      L  +E
Sbjct: 649 MVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLLGACKVHKNVE--LGKLAAEKLLSLE 705

Query: 416 P-DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           P D   Y+ + +  S +G  +E  E   +L + K++K
Sbjct: 706 PFDSATYVLLSNIYSAAGKWKEKDE-VRKLMDTKKVK 741



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 208/427 (48%), Gaps = 34/427 (7%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKS 178
           +K  G +     G Q+HG+C++ G +   V VG S++DMY K   + +  ++F+ MP ++
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRN 169

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++TW +++ GY+  G     + LF +M+  G  P+  TF S L    S G V  G ++H 
Sbjct: 170 VVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHA 229

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
             +  G   +V   +  SL++ Y KCG + EAR VF  +E + ++SW++L+ G     + 
Sbjct: 230 QSVKFGCCSTV--FVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHD 287

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA++LF   R     +     ++++ + A+   +   +Q+H+   K       +V  ++
Sbjct: 288 LEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTAL 347

Query: 359 VDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +D Y K G +  A ++F  M   +NVV+WT +I G  ++G    A  LF +M  D V P+
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407

Query: 418 GVAYLAVLSACS-------HSGLVEESQE-----------YFSRLCNDKRM--------K 451
              Y  +L+A         H+ +++ + E            +S+LCN +          +
Sbjct: 408 DFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQ 467

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSAC-RVHGDLELGRE 507
             +  +S ++    +AG  D A N+   M    +KP+     +++ AC      ++LGR+
Sbjct: 468 KDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQ 527

Query: 508 VGEILLR 514
              I ++
Sbjct: 528 FHAISIK 534



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 179/374 (47%), Gaps = 14/374 (3%)

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACG 225
           A + FD +P ++  T +  +  +   G   + L  F  +   HG           LK CG
Sbjct: 57  ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           S+     G Q+HG  I  G        +  SLVD Y+K   +V+ R+VF+ + +++V++W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRG-DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +SL+ GY Q+  L++ MELF ++R   +  +    +S++ V A   +V+ G+++HA + K
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                   V NS+++MY KCGL++EA  +F  M  +++V+W  ++ G   +G   EA+ L
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIV 461
           F              Y  V+  C++       Q   +R  +   +K     Y    + ++
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANI-----KQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D+  +AG+L  A ++   M    ++  W  +++ C  +GD+ L   +    +R DG  P 
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFS-RMREDGVAPN 407

Query: 522 NYVMMSNIHADAGS 535
           ++   + + A   S
Sbjct: 408 DFTYSTILTASVAS 421


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/724 (35%), Positives = 392/724 (54%), Gaps = 53/724 (7%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L+ C K   L  G Q+H  LV  G      L + L+++Y + G +  A  +FDKM E
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           RNV SWTA+M  +   G+ +  + LF  M +  V+P+ F      KA   L +   G  +
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           +   +  GFE N  V  SI+DM+ KCGR++ A R F+ +  K +  WN M++GY   G  
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L +FRKM   G  P+  T  S + AC +L  +  G +IHG+ I          ++  
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGN 252

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQ------------------------------------ 279
           SLVD+Y KC  +  ARR F +I+Q                                    
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 280 -------KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
                  + V+ W+S+I   AQ      A++L R++   +++V+   + S +   +  A 
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 333 VEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           + QGK+IH +  +   GLDT   + NS++DMY +CG I ++  +F+ MP +++V+W V+I
Sbjct: 373 LRQGKEIHQFIIRC--GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 430

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + YG HG   +AV LF++     ++P+ + +  +LSACSHSGL+EE  +YF  +  +  M
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 490

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P +E Y+C+VD L RAG+ +E    IE MP +P+ A+W +LL ACR+H + +L      
Sbjct: 491 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAAR 550

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  L+  +  NYV+M+NI++ AG W +  ++R L + +G+ K  G SW+EV +++H F 
Sbjct: 551 YLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFV 610

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HPL E+I   +  +   +K E+G+V    + L D+ E+ KE SL  HSEK+A+  
Sbjct: 611 VGDTSHPLMEQISAKMESLYFDIK-EIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAF 669

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    +   G  +R+ KNLRVCGDCH   K +SK+ K   ++RD  RFH F  GVCSC
Sbjct: 670 GLI----STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSC 725

Query: 691 GDYW 694
           GDYW
Sbjct: 726 GDYW 729



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 127/230 (55%), Gaps = 4/230 (1%)

Query: 212 PDEFT--FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           PDE    + S L+ C  L ++  G Q+H  L+ +G    V   +   L++ Y + GC+ +
Sbjct: 6   PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV--DVCEFLGSRLLEVYCQTGCVED 63

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           ARR+FD + +++V SW++++  Y    +  E ++LF  +    ++ D FV   +    ++
Sbjct: 64  ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE 123

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                 GK ++ Y   +    ++ V  SI+DM++KCG +D A   F E+  K+V  W ++
Sbjct: 124 LKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIM 183

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           ++GY   G  K+A+ +FRKM+L+ V+P+ +   + +SAC++  L+   +E
Sbjct: 184 VSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 233



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 7/181 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  +L  CSK   L  G ++H  +++ G      + N LIDMY +CG +  +  +FD M 
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R++VSW  ++  +  +G     ++LF Q  +  +KPN  T +  + A      +E G +
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 479

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
              M MK+ +  +P V     ++D+ S+ G+ NE     + MP +     NA + G +L 
Sbjct: 480 YFKM-MKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP----NAAVWGSLLG 534

Query: 193 G 193
            
Sbjct: 535 A 535


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/678 (37%), Positives = 384/678 (56%), Gaps = 12/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +++ GF  D+ + N LI MY KCG++  A  VFD+M  R+ 
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +N      L LF  M    V P+  T+++ I A   L     G ++HG 
Sbjct: 262 ISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGY 321

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GF     V NS+I M+S  G  +EA  +F  M  K L++W AMI+GY   G  +K 
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  +  M+  G +PDE T  S L AC  LG +  G  +H F   +G    V  ++A SL+
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV--IVANSLI 439

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC C+ +A  VF  I  K+VISW+S+ILG        EA+  F+Q+   SL+ +  
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSV 498

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    +  GK+IHA+A +   G D  + N+++DMY++CG ++ A   FN  
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC 558

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V +W +++TGY + G    AV LF KM+  DV PD + + ++L ACS SG+V +  
Sbjct: 559 E-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF  + +   + P ++HY+ +VD LGRAGRL++A   I+ MP+ P  AIW  LL+ACR+
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           + ++ELG    + +  +D  +   Y+++ N++AD+G W+E  R+RK+ R   L    G S
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F  GDD HP  ++I+ VL    ++M E  G          DI + SK E 
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKM-EATGLSMSKDSRRDDI-DASKAEI 795

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+LAI   L+    N  PG  I V KNL +C +CH  +K +SK+++    VRD  
Sbjct: 796 FCGHSERLAIAFGLI----NTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTE 851

Query: 679 RFHRFEGGVCSCGD--YW 694
           +FH F+ GVCSCGD  YW
Sbjct: 852 QFHHFKDGVCSCGDEGYW 869



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 261/500 (52%), Gaps = 10/500 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C        G ++H  + K      + L N L+ M+ + G++  A  VF KM ER++
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDL 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  L+ G+ + G     L+L+ +M    ++P+ +T    ++  G L  +  G ++H  
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  V N++I MY KCG I  A  +FD MP +  I+WNAMI+GY       +G
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M+E    PD  T TS + AC +LG    G ++HG++I +GF   V   +  SL+
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS--VNNSLI 338

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             +   GC  EA  VF  +E K ++SW+++I GY +     +A+E +  +    +  D  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A   L+++G  +H +A +        V+NS++DMY KC  ID+A E+F+ +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KNV++WT II G   +  + EA+  F++M+L  ++P+ V  ++VLSAC+  G +   +
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGK 517

Query: 439 EYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           E  +      R     + +  + ++D   R GR++ A N   S   +  +A W  LL+  
Sbjct: 518 EIHAHAL---RTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGY 572

Query: 497 RVHGDLELGREVGEILLRLD 516
              G   L  E+   ++  D
Sbjct: 573 AQQGKGGLAVELFHKMIESD 592



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 166/369 (44%), Gaps = 47/369 (12%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V +   +A  L  C+   LLD G+ LH    + G +  +++ N LIDMY+KC  ++ A 
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF ++  +NV+SWT+++ G   N  +   L  F QM   S+KPN  TL + + A   + 
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIG 511

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G +IH   +++G  ++  + N+++DMY +CGR+  A   F+    K + +WN ++ 
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLT 570

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLIT 242
           GY   G     + LF KM E    PDE TFTS L AC   G V  G +      H F I 
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 243 SGFPYSVKTV----IAGSLVDFY------------VKCGCLVEARRVFDLIE-------- 278
               +    V     AG L D Y               G L+ A R++  +E        
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQH 690

Query: 279 -----QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                 KSV  +  L   YA      E   + + +RE  L VD              + V
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD-----------PGCSWV 739

Query: 334 EQGKQIHAY 342
           E   Q+HA+
Sbjct: 740 EVAGQVHAF 748



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 13/356 (3%)

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I    L G  +K L+    MQE     +E T+ + L+ C    +   G+++H ++  
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +     V+  +  +L+  +V+ G LVEA  VF  + ++ + SW+ L+ GYA+     EA+
Sbjct: 123 TVTRLGVR--LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEAL 180

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            L+ ++    ++ D +    ++        + +G+++H +  +     D  V N+++ MY
Sbjct: 181 NLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMY 240

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           +KCG I  A  +F+ MP ++ ++W  +I+GY ++ +  E + LF  M    V+PD +   
Sbjct: 241 VKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMT 300

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIE 478
           +V+SAC   G      E   R  +   +K        + +SL       G  DEA+ +  
Sbjct: 301 SVISACEALG-----DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            M  K  ++ W  ++S    +G  E   E   I +  +G  P    + S + A AG
Sbjct: 356 KMEFKDLVS-WTAMISGYEKNGLPEKAVETYTI-MEHEGVVPDEITIASVLSACAG 409



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 5/184 (2%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL      L   L  C++   L  G ++H   ++ G  FD  L N L+DMY +CG M  
Sbjct: 491 LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A   F+   E++V SW  L+ G+ Q G     + LF +M  S V P+E T ++ + A   
Sbjct: 551 AWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA-KSLITW 182
              V +G++ +   M+  F   P + +  S++D+  + GR+ +A      MP       W
Sbjct: 610 SGMVTDGLE-YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIW 668

Query: 183 NAMI 186
            A++
Sbjct: 669 GALL 672


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/678 (36%), Positives = 395/678 (58%), Gaps = 10/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C     L  G ++HG ++K G   D+ + N LI MYAK G +  A  VF +M  R++
Sbjct: 133 IKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDL 192

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G++  G+    LS F +M +S +K + F++   + A  +   + NG +IH  
Sbjct: 193 VSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQ 252

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M+S  E + +V  S++DMY+KCGR++ A R+FD +  KS++ WNAMI GY L   S + 
Sbjct: 253 MMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFES 312

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGS 256
               RKMQE G++ PD  T  + L  C  L ++  G  +HGF I +GF P+    V+  +
Sbjct: 313 FAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPH---LVLETA 369

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y +CG L  A  +F  + ++++ISW+++I  Y +     +AM LF+ L  ++L+ D
Sbjct: 370 LVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPD 429

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              ++S++  +A+ A + + +QIH Y  K+    +T VSNSIV MY KCG +  A E+F+
Sbjct: 430 ATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFD 489

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+V++W  +I  Y  HG  + ++ LF +M     EP+G  ++++L +CS +GLV E
Sbjct: 490 RMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNE 549

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             EYF+ +  D  + P IEHY CI+D +GR G LD AKN IE MP+ P+  IW +LL+A 
Sbjct: 550 GWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTAS 609

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R  GD+EL     E +L L+ DN   YV++SN++A+AG W + ER++   + +GL+K  G
Sbjct: 610 RNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVG 669

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S V++  +   F   D +      ++ VL  + K++ E++      K+   D+ E+ + 
Sbjct: 670 CSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDL-EKKRA 728

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            S + HS +LAI   L+   +    G  + V KN+R+C  CH F K +S+  K   +VRD
Sbjct: 729 NSAKSHSLRLAICFGLISTTI----GNPVLVRKNIRICEACHRFAKRISETTKREIIVRD 784

Query: 677 ATRFHRFEGGVCSCGDYW 694
           +  FH F GG CSCGDYW
Sbjct: 785 SKIFHHFNGGHCSCGDYW 802



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 249/490 (50%), Gaps = 18/490 (3%)

Query: 57  YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           Y + G M  A  +F+ M + +   W  ++ GF+ NG     +  + +M    V+ + FT 
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
              IKA G L  +  G ++HG  +KSG + +  +GNS+I MY+K G I  A  +F  MP 
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + L++WN+MI+GYV  G   + L  FR+MQ  G   D F+    L AC   G +  G +I
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEI 249

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  ++ S     V  ++  SLVD Y KCG +  A R+FD I  KS+++W+++I GY+   
Sbjct: 250 HCQMMRSRLELDV--MVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNA 307

Query: 297 NLAEAMELFRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
              E+    R+++E   L  D   + +++   A    +  GK +H +A +        + 
Sbjct: 308 QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLE 367

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
            ++VDMY +CG +  A  LF +M  +N+++W  +I  Y K+G  ++A+ LF+ +    ++
Sbjct: 368 TALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLK 427

Query: 416 PDGVAYLAVLSACSHSGLVEESQE---YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
           PD     ++L A +    + E+++   Y ++L    ++       + IV   G+ G L  
Sbjct: 428 PDATTIASILPAYAELASLREAEQIHGYVTKL----KLDSNTFVSNSIVFMYGKCGNLLR 483

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDGDNPVNYVMMSN 528
           A+ + + M  K  I+ W T++ A  +HG     +EL  E+ E     +G   V+ ++  +
Sbjct: 484 AREIFDRMTFKDVIS-WNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS 542

Query: 529 IHADAGSWNE 538
           +   AG  NE
Sbjct: 543 V---AGLVNE 549



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 174/360 (48%), Gaps = 9/360 (2%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           E N V     +  Y + G +  A  +F+ M       WN MI G+V  G     +  + +
Sbjct: 57  ERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHR 116

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M+  G   D FT+   +KACG L  +  G ++HG +I SG    +   I  SL+  Y K 
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDI--YIGNSLIIMYAKI 174

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           GC+  A  VF  +  + ++SW+S+I GY    +   ++  FR+++   +++D F +  ++
Sbjct: 175 GCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGIL 234

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
           G  +    +  GK+IH    +    LD  V  S+VDMY KCG +D A  LF+++  K++V
Sbjct: 235 GACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV 294

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSH--SGLVEESQEYF 441
            W  +I GY  +  + E+    RKM     + PD +  + +L  C+   + L+ +S   F
Sbjct: 295 AWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGF 354

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           +         P +   + +VD  G  G+L  A+ L   M  +  I+ W  ++++   +G+
Sbjct: 355 AI---RNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLIS-WNAMIASYTKNGE 410


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/709 (35%), Positives = 381/709 (53%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+ +YAK G +  A AVF +M ER+ VSWT ++ G  + G     + +F  M +  + 
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P +FTL+  + +     +   G ++H   +K G      V NS+++MY KCG        
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  R++ A  +F+ MP +++++WNA+IAGY   G + K L
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY----------- 247
             F +M  +  + PDEFT TS L AC +LG V  G Q+H +++ S  PY           
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339

Query: 248 --------------------SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                                +  +   +L++ YVK G +  AR +FD++  + V++W++
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTA 399

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q  +  EAMELFR +     + + + +++++ V A  A +E GKQIH  A +  
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +SVSNSIV MY + G +  A  +F+ +   K  VTWT +I    +HGL ++AVGLF
Sbjct: 460 QEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLF 519

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   V+PD + ++ VLSAC+H G V+E + YF +L +   + P + HY+C+VD L R
Sbjct: 520 EEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLAR 579

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG   EA+  I+ MPV+P    W +LLSACRVH + +L     E LL +D  N   Y  +
Sbjct: 580 AGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSAL 639

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SN+++  G WN+  ++ K  + K +KK  G SW  +   +H F   D  HP  + +++  
Sbjct: 640 SNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTA 699

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
            +M   +K+  GFV  ++  LHD+ +E KEE L  HSEKLAI   LV       P K  +
Sbjct: 700 AKMWDDIKKA-GFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLV-----STPEKTTL 753

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  IK +SK+     ++RDATRFH F+ G CSC DYW
Sbjct: 754 RIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 197/438 (44%), Gaps = 76/438 (17%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N    NS++ +Y+K GR+ +A  +F  MP +  ++W  M+ G    G   + + +F  M 
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P +FT T+ L +C +  + G G ++H F++  G    V   +A S+++ Y KCG 
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP--VANSVLNMYGKCGD 212

Query: 267 LVEARRVFDLIEQKSV-------------------------------ISWSSLILGYAQE 295
              AR VF+ + ++SV                               +SW+++I GY Q 
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272

Query: 296 ENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              A+A+  F R L   ++  D F ++S++   A+  +V  GKQ+HAY  +        V
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332

Query: 355 SNSIVDMYLKCGLID---------------------------------EATELFNEMPVK 381
           +N+++ MY K G ++                                  A E+F+ M  +
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           +VV WT +I GY ++G   EA+ LFR M+    EP+     AVLS C+    +E     +
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLE-----Y 447

Query: 442 SRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            +  + K ++   E  S + +S+     R+G L  A+ + + +  +     W +++ A  
Sbjct: 448 GKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALA 507

Query: 498 VHGDLELGREVGEILLRL 515
            HG  E    + E +LR+
Sbjct: 508 QHGLGEDAVGLFEEMLRV 525



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 146/310 (47%), Gaps = 43/310 (13%)

Query: 245 FPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
            P + + V    SL+  Y K G L +AR VF  + ++  +SW+ +++G  +     EA++
Sbjct: 89  IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           +F  +    L    F L++++   A       G+++H++  K+       V+NS+++MY 
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYG 208

Query: 364 KC-------------------------------GLIDEATELFNEMPVKNVVTWTVIITG 392
           KC                               G +D A  LF  MP + +V+W  +I G
Sbjct: 209 KCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAG 268

Query: 393 YGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           Y ++GL  +A+  F +ML    + PD     +VLSAC++ G+V   ++  + +     ++
Sbjct: 269 YNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYI-----LR 323

Query: 452 PRIEHYSCIVDSL----GRAGRLDEAKNLI-ESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            R+ +   + ++L     ++G ++ A+ ++ +++    ++  +  LL      GD++  R
Sbjct: 324 SRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAR 383

Query: 507 EVGEILLRLD 516
           E+ +++   D
Sbjct: 384 EMFDVMSNRD 393


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/671 (35%), Positives = 386/671 (57%), Gaps = 12/671 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALM 85
           L +  Q+H  ++   ++    L N+LI++YAKCG +N A  +F       + +V+WT+L+
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
                       LSLF QM  S   PN+FT S+ + AS     V +G Q+H +  K GF+
Sbjct: 218 THLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFD 277

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK- 204
            N  VG +++DMY+KC  ++ A R+FD MP ++L++WN+MI G+      D+ + +F+  
Sbjct: 278 ANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDV 337

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVK 263
           ++E   IP+E + +S L AC ++G +  G Q+HG ++  G  P    T +  SL+D Y K
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPL---TYVMNSLMDMYFK 394

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           C    E  ++F  +  + V++W+ L++G+ Q +   EA   F  +R   +  D    S++
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +   A  A + QG  IH    K+    +  +  S++ MY KCG + +A ++F  +   NV
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           ++WT +I+ Y  HG A + + LF  ML + +EP  V ++ VLSACSH+G VEE   +F+ 
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +     M P  EHY+C+VD LGRAG LDEAK  IESMP+KP+ ++W  LL ACR +G+L+
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 634

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           +GRE  E L  ++  NP NYV+++N+   +G   E   +R+L    G++K  G SW++V 
Sbjct: 635 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 694

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
                F   D +H  +++I++ ++E  +++ ++ G+V   ++  + ++E  +E+ L  HS
Sbjct: 695 NMTFVFTAHDRSHSSSDEIYK-MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 753

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLA+   L+   ++      IR+ KNLR CG CH  +K  SKI     +VRD  RFHRF
Sbjct: 754 EKLALAFGLLTLPIDSP----IRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRF 809

Query: 684 EGGVCSCGDYW 694
             G CSCGDYW
Sbjct: 810 ADGFCSCGDYW 820



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 218/428 (50%), Gaps = 14/428 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L   +  +++ +G QLH  + K GF  ++ +   L+DMYAKC +M+ A  VFD+M ERN+
Sbjct: 252 LSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNL 311

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQ-MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++ GF  N      + +F   +   +V PNE ++S+ + A   +  +  G Q+HG
Sbjct: 312 VSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHG 371

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K G      V NS++DMY KC   +E  ++F  +  + ++TWN ++ G+V     ++
Sbjct: 372 VVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEE 431

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
               F  M+  G +PDE +F++ L +  SL ++  GT IH  +I  G  Y     I GSL
Sbjct: 432 ACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG--YVKNMCILGSL 489

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG LV+A +VF+ IE  +VISW+++I  Y       + +ELF  +    ++   
Sbjct: 490 ITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSH 549

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
                ++   +    VE+G   H  + K    ++    +   +VD+  + G +DEA    
Sbjct: 550 VTFVCVLSACSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFI 608

Query: 376 NEMPVKNVVT-WTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             MP+K   + W  ++     YG   + +EA    R   ++   P     LA  + C+ S
Sbjct: 609 ESMPMKPTPSVWGALLGACRKYGNLKMGREAAE--RLFEMEPYNPGNYVLLA--NMCTRS 664

Query: 432 GLVEESQE 439
           G +EE+ E
Sbjct: 665 GRLEEANE 672



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 199/380 (52%), Gaps = 15/380 (3%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAM 185
           S+++  QIH   + + +   P + N++I++Y+KCG +N+A  +F +     K+++TW ++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I          + L LF +M+  G  P++FTF+S L A  +   V  G Q+H  +   GF
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +LVD Y KC  +  A RVFD + +++++SW+S+I+G+        A+ +F
Sbjct: 277 DANI--FVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334

Query: 306 RQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           +  LRE+++  +   +SS++   A+   +  G+Q+H    K      T V NS++DMY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           C   DE  +LF  +  ++VVTW V++ G+ ++   +EA   F  M  + + PD  ++  V
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESM 480
           L + +    + +         +D+ +K       CI+ SL     + G L +A  + E +
Sbjct: 455 LHSSASLAALHQGTA-----IHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGI 509

Query: 481 PVKPSIAIWQTLLSACRVHG 500
                I+ W  ++SA ++HG
Sbjct: 510 EDHNVIS-WTAMISAYQLHG 528



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +++     ++  L  C+    L++G Q+HG +VK G      + N L+DMY KC   +  
Sbjct: 342 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEG 401

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + +R+VV+W  L+ GF+QN   +   + F  M    + P+E + ST + +S  L
Sbjct: 402 VKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASL 461

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++  G  IH   +K G+  N  +  S+I MY+KCG + +A ++F+ +   ++I+W AMI
Sbjct: 462 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMI 521

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           + Y L G +++ + LF  M   G  P   TF   L AC   G V  G   H   +     
Sbjct: 522 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIHD 580

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELF 305
            +        +VD   + G L EA+R  + +  K   S W +L+    +  NL    ++ 
Sbjct: 581 MNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL----KMG 636

Query: 306 RQLRERSLQVDGF 318
           R+  ER  +++ +
Sbjct: 637 REAAERLFEMEPY 649


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/678 (36%), Positives = 384/678 (56%), Gaps = 10/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    +D G+ +HG  VK+G S ++M+NN ++ MY+KCG +N A   F K   +NV
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314

Query: 79  VSWTALMCGFLQNGNAKACLSLF--CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSW  ++  F   G+     +L    Q+    +K NE T+   + A      + +  ++H
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G   +  F+ +  + N+ I  Y+KCG +N A ++F  +  K++ +WNA+I G+   G   
Sbjct: 375 GYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPR 433

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K L L  +M   G+ PD FT +S L AC  L S+  G +IHG+++ +G        +  S
Sbjct: 434 KALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGL--ETDFFVGTS 491

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y+ CG    AR +FD ++ K+++SW+++I GY+Q     E++ LFR+     +Q  
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSH 551

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S+ G  +  + +  GK+ H Y  K     D  V  SI+DMY K G I E+ ++F+
Sbjct: 552 EIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFD 611

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  KNV +W  II  +G HG  KEA+ L+ +M      PD   Y+ +L AC H+GLVEE
Sbjct: 612 GLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEE 671

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +YF  + N   ++P++EHY+C++D L RAGRLD+A  L+  MP +    IW +LL +C
Sbjct: 672 GLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSC 731

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R  G LE+G +V + LL L+ D   NYV++SN++A  G W+   R+R++ +  GL+K AG
Sbjct: 732 RTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAG 791

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW+EV   ++ F  GD   P + +I  +   +E+R+  E+G+       LH++ EE K 
Sbjct: 792 CSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERIS-EIGYKPNTSSVLHEVGEEEKI 850

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + LR HSEKLAI   L    L    G  +R++KNLR+C DCH   K +SK ++   VVRD
Sbjct: 851 DILRGHSEKLAISFGL----LKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRD 906

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G+CSC DYW
Sbjct: 907 NKRFHHFRDGLCSCCDYW 924



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 227/431 (52%), Gaps = 8/431 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALV-KMGFSFDLMLNNDLIDMYAKCGEM 63
           +F  +  ++ +   L+ C     ++ G +LH  +     +  D +LN  LI MYA CG  
Sbjct: 36  AFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSP 95

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKA 122
             +  VFD M  +N++ W AL+ G+ +NG     + +F  + S +  +P+ FT  + IKA
Sbjct: 96  LDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKA 155

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
            G +  V  G  IHGM +K G   +  VGN+++ MY KCG ++EA ++FD MP  +L++W
Sbjct: 156 CGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSW 215

Query: 183 NAMIAGYVLAGYS-DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           N+MI  +   G+S D   LL   + E G +PD  T  + L  C   G V  G  IHG  +
Sbjct: 216 NSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAV 275

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G   S + ++  ++V  Y KCG L EA+  F     K+V+SW+++I  ++ E ++ EA
Sbjct: 276 KLGL--SEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEA 333

Query: 302 MELFR--QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
             L +  Q++   ++ +   + +++    D   +   K++H Y+ +        +SN+ +
Sbjct: 334 FNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFR-HCFQHVELSNAFI 392

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y KCG ++ A ++F+ +  K V +W  +I G+ ++G  ++A+ L  +M     +PD  
Sbjct: 393 LAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWF 452

Query: 420 AYLAVLSACSH 430
              ++L AC+H
Sbjct: 453 TISSLLLACAH 463


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/665 (37%), Positives = 376/665 (56%), Gaps = 7/665 (1%)

Query: 31  GVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH  ++       +  LN  L   YA CG M+ A  +FD ++ +N   W  ++ G+ 
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG     L L+ +M     + + FT    +KA G L  VE G ++H   +  G E +  
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIY 197

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VGNS++ MY+K G +  A  +FD M  + L +WN MI+GY     S    L+F  M + G
Sbjct: 198 VGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAG 257

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              D  T    L AC  L +V  G  IHG+ + +    +       SL++ Y  C C+V+
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIG-NYNKFFTNSLIEMYCNCNCMVD 316

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           ARR+F+ +  K  +SW+S+ILGYA+  +  E++ LFR++       D     +++G    
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            A +  G  IH+Y  K     +T V  ++VDMY KCG +  +  +F+EMP K++V+W+ +
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           + GYG HG  +EA+ +   M  + V PD   + ++LSACSH+GLV E +E F ++  +  
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +KP + HYSC+VD LGRAG LDEA  +I +M +KP+  IW  LL+A R+H +++L     
Sbjct: 497 VKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA 556

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +  ++     +Y+ +SNI+A    W++ ER+R + R KGLKK  G S++E+D  +H F
Sbjct: 557 QKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRF 616

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +H  TE I+  L E+++++KE  G+        +D++EE KE+ L  HSE+LAI 
Sbjct: 617 LVGDKSHQQTEDIYAKLNELKQQLKEA-GYKPDTSLVFYDVEEEVKEKMLWDHSERLAIA 675

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
            AL+  G    PG VIR+ KNLRVCGDCH   K +S++     ++RD  RFH F  G CS
Sbjct: 676 FALINTG----PGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCS 731

Query: 690 CGDYW 694
           CGDYW
Sbjct: 732 CGDYW 736



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 218/412 (52%), Gaps = 9/412 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C   LL++ G ++H  +V  G   D+ + N L+ MYAK G+M  A  VFD+M ER++
Sbjct: 168 LKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDL 227

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++ G+ +N ++     +F  MG + +  +  TL   + A   L +V+ G  IHG 
Sbjct: 228 TSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGY 287

Query: 139 CMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
            +++    +N    NS+I+MY  C  + +A R+F+ +  K  ++WN+MI GY   G + +
Sbjct: 288 AVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFE 347

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR+M   G  PD+ TF + L AC  + ++  G  IH +L+  GF     T++  +L
Sbjct: 348 SLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGF--DANTIVGTAL 405

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y KCG L  +RRVFD +  KS++SWS+++ GY       EA+ +   ++  S+  D 
Sbjct: 406 VDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDN 465

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
            V +S++   +   LV +GK+I  Y  +    +  ++S+   +VD+  + G +DEA  + 
Sbjct: 466 GVFTSILSACSHAGLVVEGKEIF-YKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVII 524

Query: 376 NEMPVKNVV-TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             M +K     W  ++T    H   K A    +K+   D+ P  V+    LS
Sbjct: 525 RTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVF--DMNPKVVSSYICLS 574


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/669 (36%), Positives = 386/669 (57%), Gaps = 12/669 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALM 85
           L +  Q+H  LV       L   N L+ +YAKCG ++    +F+       NVV+WT L+
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
               ++      L+ F +M ++ + PN FT S  + A    + +  G QIH +  K  F 
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFL 232

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +P V  +++DMY+KCG +  A  +FD MP ++L++WN+MI G+V      + + +FR++
Sbjct: 233 NDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREV 292

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G  PD+ + +S L AC  L  +  G Q+HG ++  G    V   +  SLVD Y KCG
Sbjct: 293 LSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLV--YVKNSLVDMYCKCG 348

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
              +A ++F     + V++W+ +I+G  +  N  +A   F+ +    ++ D    SS+  
Sbjct: 349 LFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFH 408

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A  A + QG  IH++  K     ++ +S+S+V MY KCG + +A ++F E    NVV 
Sbjct: 409 ASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVC 468

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +IT + +HG A EA+ LF +ML + V P+ + +++VLSACSH+G +++  +YF+ + 
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMA 528

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           N   +KP +EHY+C+VD LGR GRL+EA   IESMP +P   +W  LL AC  H ++E+G
Sbjct: 529 NVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMG 588

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           REV E L +L+ DNP NY+++SNI+   G   E + +R+L    G++K +G SW++V   
Sbjct: 589 REVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNR 648

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
              F   D +H  T++I+ +L ++++ +K   G+V   ++A + + E S+E+SL  HSEK
Sbjct: 649 TFVFNANDRSHSRTQEIYGMLQKLKELIKRR-GYVAETQFATNSV-EGSEEQSLWCHSEK 706

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   L    L   PG  +R+ KNLR CGDCH  +K  S+I +   +VRD  RFHRF  
Sbjct: 707 LALAFGL----LVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTN 762

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 763 GSCSCMDYW 771



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 160/317 (50%), Gaps = 10/317 (3%)

Query: 3   RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           R   SL  ++  ++  L  C+  + LD+G Q+HG++VK G    + + N L+DMY KCG 
Sbjct: 290 REVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGL 349

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
              A  +F    +R+VV+W  ++ G  +  N +   + F  M    V+P+E + S+   A
Sbjct: 350 FEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHA 409

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S  ++++  G  IH   +K+G   N  + +S++ MY KCG + +A ++F      +++ W
Sbjct: 410 SASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCW 469

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            AMI  +   G +++ + LF +M   G +P+  TF S L AC   G +  G +   +  +
Sbjct: 470 TAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFK---YFNS 526

Query: 243 SGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLA 299
               +++K  +     +VD   + G L EA R  + +  +   + W +L+    +  N+ 
Sbjct: 527 MANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANV- 585

Query: 300 EAMELFRQLRERSLQVD 316
              E+ R++ ER  +++
Sbjct: 586 ---EMGREVAERLFKLE 599


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/699 (35%), Positives = 403/699 (57%), Gaps = 23/699 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR +F  V         L+ CS       G ++H  + ++    ++ ++  L+D YAKCG
Sbjct: 118 NRFTFPFV---------LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCG 168

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGF-LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
            ++ A  VFDKM +R+VV+W +++ GF L  G+      L  QM  + V PN  T+   +
Sbjct: 169 CLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVL 227

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSL 179
            A   ++S+ +G +IHG C++ GF  + VVG  I+D+Y KC  I+ A R+FD+M   K+ 
Sbjct: 228 PAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE 287

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKM---QEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +TW+AM+  YV+  +  + L LF ++   ++   +    T  + ++ C +L  +  GT +
Sbjct: 288 VTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCL 347

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H + I SGF   +  ++  +L+  Y KCG +  A R F+ ++ +  +S++++I GY Q  
Sbjct: 348 HCYAIKSGF--VLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNG 405

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           N  E + +F +++   +  +   L+S++   A  A +  G   H YA       DT + N
Sbjct: 406 NSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICN 465

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +++DMY KCG ID A ++F+ M  + +V+W  +I  YG HG+  EA+ LF  M  + ++P
Sbjct: 466 ALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           D V ++ ++SACSHSGLV E + +F+ +  D  + PR+EHY+C+VD L RAG   E  + 
Sbjct: 526 DDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSF 585

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           IE MP++P + +W  LLSACRV+ ++ELG  V + + +L  ++  N+V++SN+++  G W
Sbjct: 586 IEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRW 645

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD-DTHPLTEKIHQVLMEMEKRMKE 595
           ++  ++R   + +G +K  G SW+E+   +H F GG   +HP   +I   L E+   MK 
Sbjct: 646 DDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMK- 704

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
            LG+     Y   D++EE KE  L  HSEKLAI      G L+  P K I V KNLRVCG
Sbjct: 705 RLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAF----GILSLSPDKHIIVTKNLRVCG 760

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH  IK +S + K    VRDA+RFH F+ G+C+CGD+W
Sbjct: 761 DCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 249/466 (53%), Gaps = 17/466 (3%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER--NVVSWTALMCGFLQNGNAKACLSLF 101
           +FD+     L+D+Y  C E+  A  VFDKM  R  NVV W  L+  +  NG  +  + L+
Sbjct: 49  NFDVPFEK-LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLY 107

Query: 102 CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC 161
            +M    + PN FT    +KA   L     G +IH    +   E N  V  +++D Y+KC
Sbjct: 108 YKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKC 167

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           G +++A  +FD M  + ++ WN+MI+G+ L  G  D+   L  +MQ     P+  T    
Sbjct: 168 GCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVS-PNSSTIVGV 226

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-Q 279
           L A   + S+  G +IHGF +  GF   V  V+   ++D Y KC C+  ARR+FD++   
Sbjct: 227 LPAVAQVNSLRHGKEIHGFCVRRGFVGDV--VVGTGILDVYGKCQCIDYARRIFDMMGIV 284

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQ---LRERSLQVDGFVLSSMMGVFADFALVEQG 336
           K+ ++WS+++  Y   + + EA+ELF Q   L++  + +    L++++ V A+   +  G
Sbjct: 285 KNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG 344

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
             +H YA K    LD  V N+++ MY KCG+I+ A   FNEM +++ V++T II+GY ++
Sbjct: 345 TCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN 404

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEY-FSRLCNDKRMKPRI 454
           G ++E + +F +M L  + P+     +VL AC+H +GL   S  + ++ +C         
Sbjct: 405 GNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICG---FTADT 461

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + ++D   + G++D A+ + + M  K  I  W T++ A  +HG
Sbjct: 462 MICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIHG 506


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/673 (37%), Positives = 396/673 (58%), Gaps = 21/673 (3%)

Query: 31   GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++H  L + G     + + N L++MY KC  ++ AC+VF  M  ++ VSW +++ G  
Sbjct: 474  GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             N   +  +S F  M  + + P+ F++ + + +   L  +  G QIHG   K G + +  
Sbjct: 534  HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 593

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD---KGLLLFRKMQ 206
            V N+++ +Y++   INE  ++F  MP    ++WN+ I    LA Y     + L  F +M 
Sbjct: 594  VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGA--LAKYEASVLQALKYFLEMM 651

Query: 207  EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV--KTVIAGSLVDFYVKC 264
            + G  P+  TF + L A  S   +G G QIH  ++     YSV     I  +L+ FY KC
Sbjct: 652  QAGWRPNRVTFINILAAVSSFSVLGLGHQIHALIL----KYSVADDNAIENALLAFYGKC 707

Query: 265  GCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
              + +   +F  + E++  +SW+S+I GY     L +AM+L   + +R  ++DGF  +++
Sbjct: 708  EQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATV 767

Query: 324  MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
            +   A  A +E+G ++HA A +     D  V +++VDMY KCG ID A+  F  MPV+N+
Sbjct: 768  LSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 827

Query: 384  VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
             +W  +I+GY +HG  ++A+ +F +M      PD V ++ VLSACSH GLV+E  ++F  
Sbjct: 828  YSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKS 887

Query: 444  LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-D 501
            +     + PRIEH+SC+VD LGRAG + + ++ I++MP+ P+I IW+T+L A CR +G +
Sbjct: 888  MGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRN 947

Query: 502  LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
             ELG+   ++L+ L+  N VNYV++SN+HA  G+W +    R   R   +KK AG SWV 
Sbjct: 948  TELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVN 1007

Query: 562  VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
            +   +H F  GD THP  EKI++ L E+  ++++  G+V   KYAL+D++ E+KEE L  
Sbjct: 1008 MKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDA-GYVPETKYALYDLELENKEELLSY 1066

Query: 622  HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
            HSEKLAI   L R   +E P   IR+ KNLRVCGDCH   K +SKI+    ++RD+ RFH
Sbjct: 1067 HSEKLAIAFVLTRK--SELP---IRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFH 1121

Query: 682  RFEGGVCSCGDYW 694
             F GG+CSCGDYW
Sbjct: 1122 HFGGGMCSCGDYW 1134



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 252/501 (50%), Gaps = 25/501 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+   + K GF  DL + + L++ +A+ G M+ A  +F +M +RN V+   LM G  +  
Sbjct: 372 QMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQH 431

Query: 93  NAKACLSLFCQMGSSSVKPNE---FTLSTNIKASGVLSSVENGMQIHGMCMKSGF-EWNP 148
             +    +F +M       +E     LST  + S +      G ++H    +SG  +   
Sbjct: 432 QGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARI 491

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            +GN++++MY KC  I+ A  +F +MP+K  ++WN+MI+G       ++ +  F  M+ +
Sbjct: 492 SIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRN 551

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY--SVKTVIAGSLVDFYVKCGC 266
           G +P  F+  STL +C SLG +  G QIHG     GF +   +   ++ +L+  Y +   
Sbjct: 552 GMVPSNFSVISTLSSCSSLGWLTLGRQIHG----EGFKWGLDLDVSVSNALLTLYAETDS 607

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQ-EENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           + E ++VF  + +   +SW+S I   A+ E ++ +A++ F ++ +   + +     +++ 
Sbjct: 608 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILA 667

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVV 384
             + F+++  G QIHA   K     D ++ N+++  Y KC  +++   +F+ M   ++ V
Sbjct: 668 AVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEV 727

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS-- 442
           +W  +I+GY   G+  +A+ L   M+    + DG  +  VLSAC+    +E   E  +  
Sbjct: 728 SWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACA 787

Query: 443 -RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            R C    ++  +   S +VD   + G++D A    E MPV+ +I  W +++S    HG 
Sbjct: 788 VRAC----LESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGH 842

Query: 502 LELGREVGEILLRLD--GDNP 520
              G++  +I  R+   G +P
Sbjct: 843 ---GQKALKIFTRMKQHGQSP 860



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 227/416 (54%), Gaps = 21/416 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            LH  L K GF+ D+   N LI++Y + G +  A  +FD+M ++N+VSW+ L+ G+ QN 
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVV 150
                 SLF  + SS + PN F + + ++A     S  ++ GMQIH    K     + ++
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMIL 280

Query: 151 GNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            N ++ MYS C G I++A R+FD +  ++ +TWN++I+ Y   G +     LF  MQ  G
Sbjct: 281 SNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG 340

Query: 210 -EI---PDEFTFTSTLKACGSLGSVGGG--TQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            E+   P+E+T  S + A  SL   G     Q+   +  SGF   +   +  +LV+ + +
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL--YVGSALVNGFAR 398

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            G +  A+ +F  +  ++ ++ + L++G A++    EA ++F+++++  ++++   L  +
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVL 457

Query: 324 MGVFADFALVEQGK----QIHAYAAKVPSGL---DTSVSNSIVDMYLKCGLIDEATELFN 376
           +  F +F+ +++GK    ++HAY  +  SGL     S+ N++V+MY KC  ID A  +F 
Sbjct: 458 LSTFTEFSNLKEGKRKGQEVHAYLFR--SGLVDARISIGNALVNMYGKCTAIDNACSVFQ 515

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            MP K+ V+W  +I+G   +   +EAV  F  M  + + P   + ++ LS+CS  G
Sbjct: 516 LMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 222/446 (49%), Gaps = 28/446 (6%)

Query: 4   VSFSLVSERQRLADSLRCCSK--NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC- 60
           +S  L+     +  +LR C +  +  +  G+Q+H  + K+    D++L+N L+ MY+ C 
Sbjct: 233 ISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCS 292

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV----KPNEFTL 116
           G ++ A  VFD++  RN V+W +++  + + G+A +   LF  M    V    +PNE+TL
Sbjct: 293 GSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTL 352

Query: 117 STNIKASGVLSSVENGM----QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            + + A+  L+  + G+    Q+     KSGF  +  VG+++++ +++ G ++ A  +F 
Sbjct: 353 CSLVTAACSLA--DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFK 410

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE--------FTFTSTLKAC 224
            M  ++ +T N ++ G       ++   +F++M++  EI  E        FT  S LK  
Sbjct: 411 QMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKE- 469

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
                   G ++H +L  SG     +  I  +LV+ Y KC  +  A  VF L+  K  +S
Sbjct: 470 ----GKRKGQEVHAYLFRSGL-VDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS 524

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+S+I G    E   EA+  F  ++   +    F + S +   +    +  G+QIH    
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK-EAV 403
           K    LD SVSN+++ +Y +   I+E  ++F +MP  + V+W   I    K+  +  +A+
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQAL 644

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACS 429
             F +M+     P+ V ++ +L+A S
Sbjct: 645 KYFLEMMQAGWRPNRVTFINILAAVS 670



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 208/433 (48%), Gaps = 15/433 (3%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           +FS++S       +L  CS    L  G Q+HG   K G   D+ ++N L+ +YA+   +N
Sbjct: 557 NFSVIS-------TLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSIN 609

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQ-NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
               VF +M E + VSW + +    +   +    L  F +M  +  +PN  T    + A 
Sbjct: 610 ECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAV 669

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITW 182
              S +  G QIH + +K     +  + N+++  Y KC ++ +   +F  M   +  ++W
Sbjct: 670 SSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSW 729

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N+MI+GY+ +G   K + L   M + G+  D FTF + L AC S+ ++  G ++H   + 
Sbjct: 730 NSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVR 789

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +     V  V+  +LVD Y KCG +  A R F+L+  +++ SW+S+I GYA+  +  +A+
Sbjct: 790 ACLESDV--VVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKAL 847

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           ++F ++++     D      ++   +   LV++G + H  +     GL   + +   +VD
Sbjct: 848 KIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK-HFKSMGEVYGLSPRIEHFSCMVD 906

Query: 361 MYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           +  + G + +  +    MP+  N++ W  ++    +       +G     +L ++EP   
Sbjct: 907 LLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNA 966

Query: 420 AYLAVLSACSHSG 432
               +LS    +G
Sbjct: 967 VNYVLLSNMHAAG 979



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 226/467 (48%), Gaps = 57/467 (12%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           SS+ +   +H    K+GF  +    N++I++Y + G +  A ++FD MP K+L++W+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG--GTQIHGFLITSG 244
           +GY      D+   LF+ +   G +P+ F   S L+AC   GS G   G QIH F+    
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK-- 271

Query: 245 FPYSVKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
            P     +++  L+  Y  C G + +A RVFD I+ ++ ++W+S+I  Y +  +   A +
Sbjct: 272 LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFK 331

Query: 304 LFRQLR----ERSLQVDGFVLSSMMGV---FADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           LF  ++    E +L+ + + L S++      AD  LV   +Q+     K     D  V +
Sbjct: 332 LFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLL-EQMLTRIEKSGFLRDLYVGS 390

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           ++V+ + + GL+D A  +F +M  +N VT   ++ G  +    +EA  +F++M  D VE 
Sbjct: 391 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEI 449

Query: 417 DGVAYLAVLSACSHSGLVEE----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
           +  + + +LS  +    ++E     QE  + L     +  RI   + +V+  G+   +D 
Sbjct: 450 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDN 509

Query: 473 AKNLIESMPVKPSIAIWQTL-----------------------------------LSACR 497
           A ++ + MP K +++ W ++                                   LS+C 
Sbjct: 510 ACSVFQLMPSKDTVS-WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCS 568

Query: 498 VHGDLELGREV-GE-ILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
             G L LGR++ GE     LD D  V+  +++ ++A+  S NEC+++
Sbjct: 569 SLGWLTLGRQIHGEGFKWGLDLDVSVSNALLT-LYAETDSINECQKV 614


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/664 (35%), Positives = 388/664 (58%), Gaps = 12/664 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  +VK+G+  +  +   LI+ Y+ CG ++ A +VF+ +L +++V W  ++  +++NG 
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  L L  +MG     PN +T  T +KAS  L +      +HG  +K+ +E +P VG  
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++ +Y++ G +++A ++F+ MP   ++ W+ MIA +   G+ +K + +F +M+E   +P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPN 347

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           EFT +S L  C      G G Q+HG ++  GF   V   ++ +L+D Y KC  +  A ++
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDV--YVSNALIDVYAKCEKMDTAVKL 405

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAE---AMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           F  +  K+V+SW+++I+GY   ENL E   A+ +FR+     + V     SS +G  A  
Sbjct: 406 FAELSSKNVVSWNTVIVGY---ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +E G Q+H  A K  +    +VSNS++DMY KCG I  A  +FNEM   +V +W  +I
Sbjct: 463 ASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALI 522

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +GY  HGL ++A+ +F  M   D +P+G+ +L VLS CS++GL+++ Q+ F  +  D  +
Sbjct: 523 SGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGI 582

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P +EHY+C+V   GR+G+LD+A NLIE +P +PS+ IW+ +LSA     + E  R   E
Sbjct: 583 EPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAE 642

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L+++  +   YV++SN++A A  W     +RK  + KG+KK  G SW+E   ++HFF 
Sbjct: 643 EILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFS 702

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            G   HP  + I+ +L  +  +     G+V      L D+ +E K++ L VHSE+LA+  
Sbjct: 703 VGSSDHPDMKLINGMLEWLNMKATRA-GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            LVR   +      I + KNLR+C DCH  +K +S I++   V+RD  RFH F  GVCSC
Sbjct: 762 GLVRMPSSRNR---ILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSC 818

Query: 691 GDYW 694
            D+W
Sbjct: 819 DDHW 822



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 243/503 (48%), Gaps = 18/503 (3%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           RC  KN  +     +H  ++K G   DL   N L++ Y K G    A  +FD+M ERN V
Sbjct: 58  RCIRKNDSVS-AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNV 116

Query: 80  SWTALMCGFLQNGNAKAC---LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           S+  L  G+       AC   + L+ ++     + N    ++ +K    L   E    +H
Sbjct: 117 SYVTLTQGY-------ACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLH 169

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K G++ N  VG ++I+ YS CG ++ A  +F+ +  K ++ W  +++ YV  G  +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFE 229

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L L  +M   G +P+ +TF + LKA   LG+      +HG ++ +   Y +   +   
Sbjct: 230 DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT--CYELDPRVGVG 287

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y + G + +A +VF+ + +  V+ WS +I  + Q     +A+++F ++RE  +  +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPN 347

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F LSS++   A       G+Q+H    KV   LD  VSN+++D+Y KC  +D A +LF 
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFA 407

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           E+  KNVV+W  +I GY   G   +A+ +FR+ L + V    V + + L AC+    +E 
Sbjct: 408 ELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMEL 467

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +           K R+   + ++D   + G +  A+ +   M     +A W  L+S  
Sbjct: 468 GVQVHGLAIKTNNAK-RVAVSNSLIDMYAKCGDIKVAQTVFNEMET-IDVASWNALISGY 525

Query: 497 RVHGDLELGREVGEILLRLDGDN 519
             HG   LGR+   I   + G +
Sbjct: 526 STHG---LGRQALRIFDIMKGSD 545



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 200/366 (54%), Gaps = 6/366 (1%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +   +HG ++K  +  D  +   L+ +Y + G+M+ A  VF++M + +VV W+ ++  F 
Sbjct: 265 FAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG     + +F +M    V PNEFTLS+ +    +      G Q+HG+ +K GF+ +  
Sbjct: 325 QNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVY 384

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N++ID+Y+KC +++ A ++F  + +K++++WN +I GY   G   K L +FR+   + 
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQ 444

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
               E TF+S L AC SL S+  G Q+HG  I +    + +  ++ SL+D Y KCG +  
Sbjct: 445 VSVTEVTFSSALGACASLASMELGVQVHGLAIKTN--NAKRVAVSNSLIDMYAKCGDIKV 502

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A+ VF+ +E   V SW++LI GY+      +A+ +F  ++    + +G     ++   ++
Sbjct: 503 AQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSN 562

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
             L++QG+     +     G++  + +   +V ++ + G +D+A  L   +P + +V+ W
Sbjct: 563 AGLIDQGQDCFE-SMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIW 621

Query: 387 TVIITG 392
             +++ 
Sbjct: 622 RAMLSA 627


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/712 (35%), Positives = 378/712 (53%), Gaps = 77/712 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+ M+AK G +  A  VF +M ER+ VSWT ++ G  + G     +     M +    
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P +FTL+  + +  V  +   G ++H   +K G      V NS+++MY KCG        
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  R++ A  +F+ MP +S+++WNAMIAGY   G   K L
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 200 LLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA---- 254
            LF +M  E    PDEFT TS L AC +LG+V  G Q+H +++ +   Y+ +   A    
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 255 ---------------------------GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                                       +L++ YVK G +  AR +F ++  + V++W++
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q     EA++LFR +     + + + L++++ V A  A ++ GKQIH  A +  
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +SVSN+I+ MY + G    A  +F+++   K  +TWT +I    +HG  +EAVGLF
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   VEPD + Y+ VLSACSH+G V E + Y+ ++ N+ ++ P + HY+C+VD L R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG   EA+  I  MPV+P    W +LLSACRVH + EL     E LL +D +N   Y  +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G W++  R+ K  + K ++K  G SW  +  +IH F   D  HP  + ++   
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA-- 699

Query: 587 MEMEKRMKEEL---GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
             M  RM EE+   GFV  ++  LHD+ +E KEE L  HSEKLAI       GL   P K
Sbjct: 700 --MAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF-----GLISTPEK 752

Query: 644 -VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +RV KNLRVC DCH  IK +SK+     +VRDATRFH F  G+CSC DYW
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 214/488 (43%), Gaps = 80/488 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L  C+       G ++H  +VK+G    + + N +++MY KCG+   A  VF++M 
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMP 226

Query: 75  ERNV-------------------------------VSWTALMCGFLQNGNAKACLSLFCQ 103
            R+V                               VSW A++ G+ QNG     L LF +
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSR 286

Query: 104 M-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           M   SS+ P+EFT+++ + A   L +V  G Q+H   +++   +N  V N++I  Y+K G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346

Query: 163 RINEAAR---------------------------------MFDVMPAKSLITWNAMIAGY 189
            +  A R                                 MF VM  + ++ W AMI GY
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G +D+ + LFR M   G  P+ +T  + L  C SL  +  G QIH   I S    S 
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERS- 465

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            + ++ +++  Y + G    ARR+FD +  +K  I+W+S+I+  AQ     EA+ LF ++
Sbjct: 466 -SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGK----QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
               ++ D      ++   +    V +GK    QI       P   + S    +VD+  +
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP---EMSHYACMVDLLAR 581

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            GL  EA E    MPV+ + + W  +++    H  A+ A     K+L  D    G AY A
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG-AYSA 640

Query: 424 ---VLSAC 428
              V SAC
Sbjct: 641 IANVYSAC 648



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 211/475 (44%), Gaps = 84/475 (17%)

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           +  ++ F WN     S++ M++K GR+ +A  +F  MP +  ++W  M+ G   AG   +
Sbjct: 93  LARRNVFTWN-----SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +     M   G  P +FT T+ L +C    +   G ++H F++  G    V   +A S+
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP--VANSV 205

Query: 258 VDFYVKCGCLVEARRVF------------------------DLIEQ-------KSVISWS 286
           ++ Y KCG    A  VF                        DL E        +S++SW+
Sbjct: 206 LNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWN 265

Query: 287 SLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++I GY Q    A+A++LF R L E S+  D F ++S++   A+   V  GKQ+HAY  +
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR 325

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDE---------------------------------AT 372
                ++ V+N+++  Y K G ++                                  A 
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           E+F  M  ++VV WT +I GY ++G   EA+ LFR M+    EP+     AVLS C+   
Sbjct: 386 EMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLA 445

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAI 488
            ++  ++   R      ++  +E  S + +++     R+G    A+ + + +  +     
Sbjct: 446 CLDYGKQIHCRA-----IRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECER 541
           W +++ A   HG  E    + E +LR  G  P  + YV + +  + AG  NE +R
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRA-GVEPDRITYVGVLSACSHAGFVNEGKR 554



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 40/345 (11%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  +   +   L  C+    +  G Q+H  +++   +++  + N LI  YAK G +  A
Sbjct: 292 SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENA 351

Query: 67  CAVFDKMLE---------------------------------RNVVSWTALMCGFLQNGN 93
             + D+ +E                                 R+VV+WTA++ G+ QNG 
Sbjct: 352 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 411

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + LF  M +   +PN +TL+  +     L+ ++ G QIH   ++S  E +  V N+
Sbjct: 412 NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNA 471

Query: 154 IIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           II MY++ G    A RMFD V   K  ITW +MI      G  ++ + LF +M   G  P
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T+   L AC   G V  G + +   I +    + +      +VD   + G   EA+ 
Sbjct: 532 DRITYVGVLSACSHAGFVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQE 590

Query: 273 VFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
               +  +   I+W SL+      +N AE  EL     E+ L +D
Sbjct: 591 FIRRMPVEPDAIAWGSLLSACRVHKN-AELAEL---AAEKLLSID 631



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 167/362 (46%), Gaps = 73/362 (20%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK----CGCLVEARR 272
           +   L+ C +  + G G  IH   + +G   S    +  +L+ +Y +     G L +ARR
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASA--YLCNNLLSYYGETAGGAGGLRDARR 86

Query: 273 VFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERS------------------ 312
           +FD I   +++V +W+SL+  +A+   LA+A  +F ++ ER                   
Sbjct: 87  LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146

Query: 313 --------LQVDGFVLS--SMMGVFADFALVEQG---KQIHAYAAKVPSGLDTSVSNSIV 359
                   +  DGF  +  ++  V +  A+ + G   +++H++  K+  G    V+NS++
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206

Query: 360 DMYLKCGLIDEATELFNEMPVKNV-------------------------------VTWTV 388
           +MY KCG  + A+ +F  MPV++V                               V+W  
Sbjct: 207 NMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNA 266

Query: 389 IITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           +I GY ++GL  +A+ LF +ML +  + PD     +VLSAC++ G V   ++  + +   
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           + M    +  + ++ +  ++G ++ A+ ++ +SM    ++  +  LL      GD+E  R
Sbjct: 327 E-MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385

Query: 507 EV 508
           E+
Sbjct: 386 EM 387


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/742 (34%), Positives = 408/742 (54%), Gaps = 69/742 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L+ C +      G  LHG +   GF  ++ + N L+ MY++CG +  A  VFD++ 
Sbjct: 152 LPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEIT 211

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMG------SSSVKPNEFTLSTNIKASGV 125
            +   +V+SW +++   ++  N +  L LF +M       +++ + +  ++   + A   
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACAS 271

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L ++    +IH   +++G   +  V N++ID Y+KCG +N+A ++F+VM  K +++WNAM
Sbjct: 272 LKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAM 331

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           + GY                              V+AGY+ +G     L  F++M   G 
Sbjct: 332 VTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS 391

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF----------PYSVKTVIAGSLVDF 260
            P+  T  S L AC SLG++  G +IH + +                    ++  +L+D 
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451

Query: 261 YVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--D 316
           Y KC     AR +FD I   +++V++W+ +I GYAQ  +  +A+++F ++  +   V  +
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPN 511

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            + +S ++   A  A +  GKQIHAY  +     PS     V+N ++DMY KCG +D A 
Sbjct: 512 AYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVY--FVANCLIDMYSKCGDVDTAR 569

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F+ MP +N V+WT +++GYG HG  KEA+ +F KM      PD +++L +L ACSHSG
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSG 629

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +V++   YF  +  D  +    EHY+C++D L R GRLD+A   I+ MP++PS  IW  L
Sbjct: 630 MVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVAL 689

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           LSACRVH ++EL       L+ +  +N  +Y ++SNI+A+A  W +  R+R+L +  G+K
Sbjct: 690 LSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIK 749

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           K  G SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ +
Sbjct: 750 KRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK-VMGYVPETNFALHDVDD 808

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
           E K   L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    
Sbjct: 809 EEKNNLLSEHSEKLALAYGL----LTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 864

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
           +VRD++RFH F+ G CSCG YW
Sbjct: 865 IVRDSSRFHHFKNGSCSCGGYW 886



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 255/528 (48%), Gaps = 67/528 (12%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L   ++  Y  CG    A +V +++     V W  L+   ++ G+    + + C+M  + 
Sbjct: 85  LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
            KP+ FTL   +KA G L S   G  +HG+   +GFE N  V N+++ MYS+CG + +A+
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204

Query: 169 RMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTS 219
            +FD +  K +   I+WN+++A +V        L LF +M      +   E  D  +  +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            L AC SL ++    +IH + I +G        +  +L+D Y KCG + +A +VF+++E 
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNG--TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS------------------ 321
           K V+SW++++ GY Q  N   A ELF  +R+ ++ +D    S                  
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382

Query: 322 -----------------SMMGVFADFALVEQGKQIHAYAAK------------VPSGLDT 352
                            S++   A    + QG +IHAY+ K               G D 
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
            V N+++DMY KC     A  +F+ +P   +NVVTWTV+I GY ++G + +A+ +F +M+
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 411 LDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRA 467
                V P+      +L AC+H   +   ++  + +      +P +   + C++D   + 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           G +D A+N+ +SMP +  ++ W +++S   +HG    G+E  +I  ++
Sbjct: 563 GDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKM 606


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/662 (37%), Positives = 386/662 (58%), Gaps = 41/662 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  +  +    +  L   L+  YA CGE      VFD+M +RNVV +  ++  ++ N 
Sbjct: 39  KLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNH 98

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L +F +M +   +P+ +T    +KA     ++  G+ IHG  +K G ++N  VGN
Sbjct: 99  RYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGN 158

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +I MY KCG + EA R+FD M  K +++WN+M+AGY      D  L + R+M+++G+ P
Sbjct: 159 GLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKP 218

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S + A  +  S                                     ++   +
Sbjct: 219 DGCTMASLMPAVANTSSEN-----------------------------------VLYVEK 243

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  +E+K++ISW+ +I  Y +     +A++L+ Q+ +  ++ D    +S++    D + 
Sbjct: 244 IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSA 303

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  G++IH Y  K     +  + NS++DMY +CG +D+A  +F+ M  ++V +WT +I+ 
Sbjct: 304 LLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISA 363

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG  G    AV LF +ML     PD +A++A+LSACSHSGL++E + YF ++ +D R+ P
Sbjct: 364 YGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITP 423

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           RIEHY+C+VD LGRAGR+DEA N+I+ MP++P+  +W TLLS+CRV  ++++G    + L
Sbjct: 424 RIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNL 483

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L+L  +    YV++SNI+A AG W E   +R + + K ++K  G S VE++ ++H F  G
Sbjct: 484 LQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAG 543

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP +++I++ L  +  +MK ELG+V     ALHD++EE KE  L VHSEKLAI  AL
Sbjct: 544 DTSHPQSKEIYEELGVLVAKMK-ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 602

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
               LN Q  + IR+ KNLRVCGDCH   K +SKI++   +VRD  RFH F+ GVCSCGD
Sbjct: 603 ----LNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGD 657

Query: 693 YW 694
           YW
Sbjct: 658 YW 659



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 196/415 (47%), Gaps = 49/415 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  L YG+ +HG ++K+G  F+L + N LI MY KCG +  A  VFD+M+ ++V
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+  N      L +  +M     KP+  T+++ + A    SS EN + +   
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-ENVLYVE-- 242

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                         ++F  +  K+LI+WN MI  Y+      + 
Sbjct: 243 ------------------------------KIFVNLERKNLISWNVMIRVYMKNSLPTQA 272

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L+ +M++    PD  TF S L ACG L ++  G +IH ++       ++  ++  SL+
Sbjct: 273 VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL--LLENSLI 330

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y +CGCL +A+RVFD ++ + V SW+SLI  Y        A+ LF ++       D  
Sbjct: 331 DMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSI 390

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI------VDMYLKCGLIDEAT 372
              +++   +   L+++G+    Y  ++    D  ++  I      VD+  + G +DEA 
Sbjct: 391 AFVAILSACSHSGLLDEGR---IYFKQMTD--DYRITPRIEHYACLVDLLGRAGRVDEAY 445

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +  +MP++ N   W  +++           +G+     L  + P+   Y  +LS
Sbjct: 446 NIIKQMPIEPNERVWATLLSSC--RVFTNMDIGILAADNLLQLAPEQSGYYVLLS 498



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 3/163 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C     L  G ++H  + K     +L+L N LIDMYA+CG ++ A  VFD+M 
Sbjct: 291 FASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMK 350

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V SWT+L+  +   G     ++LF +M +S   P+       + A      ++ G +
Sbjct: 351 FRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG-R 409

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
           I+   M   +   P + +   ++D+  + GR++EA  +   MP
Sbjct: 410 IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMP 452



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           K++H     + S  + S+   ++  Y  CG      ++F+EM  +NVV + V+I  Y  +
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
               + + +FR+M+     PD   Y  VL ACS S    E+  Y   L +   +K  ++ 
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS----ENLRY-GLLIHGDVLKVGLDF 152

Query: 457 YSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA----CRVHGDLELGREV 508
              + + L    G+ G L EA+ + + M  K  ++ W ++++      R    LE+ RE+
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVS-WNSMVAGYAHNMRFDDALEICREM 211

Query: 509 GEILLRLDG 517
            +   + DG
Sbjct: 212 EDYGQKPDG 220


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/682 (36%), Positives = 400/682 (58%), Gaps = 10/682 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           +  +L  C        G ++H +++K    S +L + N LI MY +CG+M  A  +  +M
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
              +VV+W +L+ G++QN   K  L  F  M ++  K +E ++++ I ASG LS++  GM
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K G++ N  VGN++IDMYSKC       R F  M  K LI+W  +IAGY    
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L LFR + +     DE    S L+A   L S+    +IH  ++  G    + TVI
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVI 523

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              LVD Y KC  +  A RVF+ I+ K V+SW+S+I   A   N +EA+ELFR++ E  L
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   L  ++   A  + + +G++IH Y  +    L+ S++ ++VDMY  CG +  A  
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ +  K ++ +T +I  YG HG  K AV LF KM  ++V PD +++LA+L ACSH+GL
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++E + +   + ++  ++P  EHY C+VD LGRA  + EA   ++ M  +P+  +W  LL
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 763

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           +ACR H + E+G    + LL L+  NP N V++SN+ A+ G WN+ E++R   ++ G++K
Sbjct: 764 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEK 823

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SW+E+D ++H F   D +HP +++I++ L E+ ++++ E+G+V   K+ LH++ E 
Sbjct: 824 HPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEG 883

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVF 672
            K + L  HSE++AI   L+R      P +  +R+ KNLRVC DCH F K +SK+ +   
Sbjct: 884 EKVQMLHGHSERIAIAYGLLR-----TPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDI 938

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
           V+RDA RFH FE G+CSCGD W
Sbjct: 939 VMRDANRFHHFESGLCSCGDSW 960



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 250/513 (48%), Gaps = 10/513 (1%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDL-MLNNDLIDMYAKCGEMNGACA 68
           S  +  A  L  C K   +  G QLH  + K   SF+L  L   L+ MY KCG ++ A  
Sbjct: 78  SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VFD+M +R   +W  ++  ++ NG   + L+L+  M    V     +    +KA   L  
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIA 187
           + +G ++H + +K G+     + N+++ MY+K   ++ A R+FD    K   + WN++++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            Y  +G S + L LFR+M   G  P+ +T  S L AC        G +IH  ++ S   +
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-TH 316

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           S +  +  +L+  Y +CG + +A R+   +    V++W+SLI GY Q     EA+E F  
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +     + D   ++S++      + +  G ++HAY  K     +  V N+++DMY KC L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
                  F  M  K++++WT +I GY ++    EA+ LFR +    +E D +   ++L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            S    +   +E    +     +   I++   +VD  G+   +  A  + ES+  K  ++
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDVVS 554

Query: 488 IWQTLLSACRVHGD----LELGREVGEILLRLD 516
            W +++S+  ++G+    +EL R + E  L  D
Sbjct: 555 -WTSMISSSALNGNESEAVELFRRMVETGLSAD 586


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/678 (34%), Positives = 391/678 (57%), Gaps = 12/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALV-KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L  C+    L+ G  +H  +    G   D++L N L+ MYAKCG +  A  +F++M  R+
Sbjct: 128 LGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRS 187

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V SW A++  + Q+G+ +  + L+  M    V+P+  T ++ + A   L  ++ G +IH 
Sbjct: 188 VSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHA 244

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           +    G E +  + N+++ MY++C  +++AA++F  +P + +++W+AMIA +      D+
Sbjct: 245 LISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDE 304

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +  + KMQ  G  P+ +TF S L AC S+G +  G  +H  ++ +G  Y +  V   +L
Sbjct: 305 AIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG--YKITLVNGTAL 362

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVD 316
           VD Y   G L EAR +FD IE +    W+ LI GY+++ +    +EL+R+++  + +   
Sbjct: 363 VDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 422

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
             + S ++   A        +Q H+         D  ++ S+V+MY + G ++ A ++F+
Sbjct: 423 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFD 482

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +M  ++ + WT +I GY KHG    A+GL+++M L+  EP  + ++ VL ACSH+GL E+
Sbjct: 483 KMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 542

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++ F  + +D  M P I HYSCI+D L RAGRL +A+ LI +MPV+P+   W +LL A 
Sbjct: 543 GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGAS 602

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H D++        + +LD  +P +YV++SN+HA  G+      +R    ++G+KK  G
Sbjct: 603 RIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRG 662

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW+EV  +IH F  GD++HP  ++I   L  +  ++KE  G+V   +  LHD+ E+ KE
Sbjct: 663 SSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA-GYVPESEEVLHDVGEKEKE 721

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             LR+HSEKLAI   L+       PG  +R+F  LR+C DCH  +K +S I +   +VRD
Sbjct: 722 LLLRLHSEKLAIAFGLIATA----PGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRD 777

Query: 677 ATRFHRFEGGVCSCGDYW 694
           ++RFH+F  G CSCGDYW
Sbjct: 778 SSRFHKFRDGQCSCGDYW 795



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 274/523 (52%), Gaps = 29/523 (5%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D+LR C     L+   Q+H   +    S ++ L N+++  Y KCG +  A A FD +  +
Sbjct: 32  DALRQCQD---LESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARK 87

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N  SW +++  + QNG+ +A L L+ +M    ++PN    +T + A   + ++E G  IH
Sbjct: 88  NDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIH 144

Query: 137 G-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             +    G + + ++ NS++ MY+KCG + +A R+F+ M  +S+ +WNAMIA Y  +G+ 
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHF 204

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++ + L+  M      P   TFTS L AC +LG +  G +IH  + + G    +   +  
Sbjct: 205 EEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS--LQN 259

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+  Y +C CL +A ++F  + ++ V+SWS++I  +A+ +   EA+E + +++   ++ 
Sbjct: 260 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 319

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           + +  +S++   A    +  G+ +H     + +G   ++ N  ++VD+Y   G +DEA  
Sbjct: 320 NYYTFASVLLACASVGDLRAGRAVHDQI--LGNGYKITLVNGTALVDLYTSYGSLDEARS 377

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSG 432
           LF+++  ++   WTV+I GY K G     + L+R+M     V    + Y  V+SAC+  G
Sbjct: 378 LFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLG 437

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
              ++++  S +  D  +   +   S +V+   R G L+ A+ + + M  + ++A W TL
Sbjct: 438 AFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNLESARQVFDKMSSRDTLA-WTTL 495

Query: 493 LSACRVHGD----LELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           ++    HG+    L L +E     + L+G  P     M  ++A
Sbjct: 496 IAGYAKHGEHGLALGLYKE-----MELEGAEPSELTFMVVLYA 533



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+    L  G  +H  ++  G+   L+    L+D+Y   G ++ A ++FD++ 
Sbjct: 324 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGM 133
            R+   WT L+ G+ + G+    L L+ +M +++  P  +   S  I A   L +  +  
Sbjct: 384 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 443

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q H      G   + V+  S+++MYS+ G +  A ++FD M ++  + W  +IAGY   G
Sbjct: 444 QAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 503

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                L L+++M+  G  P E TF   L AC   G    G Q+    I+    Y++   I
Sbjct: 504 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQL---FISIQSDYAMHPNI 560

Query: 254 A--GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           A    ++D   + G L +A  + + +  + + ++WSSL+
Sbjct: 561 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/712 (35%), Positives = 378/712 (53%), Gaps = 77/712 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+ M+AK G +  A  VF +M ER+ VSWT ++ G  + G     +     M +    
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P +FTL+  + +  V  +   G ++H   +K G      V NS+++MY KCG        
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  R++ A  +F+ MP +S+++WNAMIAGY   G   K L
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 200 LLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA---- 254
            LF +M  E    PDEFT TS L AC +LG+V  G Q+H +++ +   Y+ +   A    
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 255 ---------------------------GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                                       +L++ YVK G +  AR +F ++  + V++W++
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q     EA++LFR +     + + + L++++ V A  A ++ GKQIH  A +  
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +SVSN+I+ MY + G    A  +F+++   K  +TWT +I    +HG  +EAVGLF
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   VEPD + Y+ VLSACSH+G V E + Y+ ++ N+ ++ P + HY+C+VD L R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG   EA+  I  MPV+P    W +LLSACRVH + EL     E LL +D +N   Y  +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G W++  R+ K  + K ++K  G SW  +  +IH F   D  HP  + ++   
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA-- 699

Query: 587 MEMEKRMKEEL---GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
             M  RM EE+   GFV  ++  LHD+ +E KEE L  HSEKLAI       GL   P K
Sbjct: 700 --MAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF-----GLISTPEK 752

Query: 644 -VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +RV KNLRVC DCH  IK +SK+     +VRDATRFH F  G+CSC DYW
Sbjct: 753 TTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 215/488 (44%), Gaps = 80/488 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK-- 72
           L + L  C+       G ++H  +VK+G    + + N +++MY KCG+   A  VF++  
Sbjct: 167 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 226

Query: 73  -----------------------------MLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                        M +R++VSW A++ G+ QNG     L LF +
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 286

Query: 104 M-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           M   SS+ P+EFT+++ + A   L +V  G Q+H   +++   +N  V N++I  Y+K G
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 346

Query: 163 RINEAAR---------------------------------MFDVMPAKSLITWNAMIAGY 189
            +  A R                                 MF VM  + ++ W AMI GY
Sbjct: 347 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 406

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G +D+ + LFR M   G  P+ +T  + L  C SL  +  G QIH   I S    S 
Sbjct: 407 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS- 465

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            + ++ +++  Y + G    ARR+FD +  +K  I+W+S+I+  AQ     EA+ LF ++
Sbjct: 466 -SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGK----QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
               ++ D      ++   +    V +GK    QI       P   + S    +VD+  +
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP---EMSHYACMVDLLAR 581

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            GL  EA E    MPV+ + + W  +++    H  A+ A     K+L  D    G AY A
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG-AYSA 640

Query: 424 ---VLSAC 428
              V SAC
Sbjct: 641 IANVYSAC 648



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 211/475 (44%), Gaps = 84/475 (17%)

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           +  ++ F WN     S++ M++K GR+ +A  +F  MP +  ++W  M+ G   AG   +
Sbjct: 93  LARRNVFTWN-----SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +     M   G  P +FT T+ L +C    +   G ++H F++  G    V   +A S+
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP--VANSV 205

Query: 258 VDFYVKCGCLVEARRVF------------------------DLIEQ-------KSVISWS 286
           ++ Y KCG    A  VF                        DL E        +S++SW+
Sbjct: 206 LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWN 265

Query: 287 SLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++I GY Q    A+A++LF R L E S+  D F ++S++   A+   V  GKQ+HAY  +
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR 325

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDE---------------------------------AT 372
                ++ V+N+++  Y K G ++                                  A 
Sbjct: 326 TEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           E+F  M  ++VV WT +I GY ++G   EA+ LFR M+    EP+     AVLS C+   
Sbjct: 386 EMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLA 445

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAI 488
            ++  ++   R      ++  +E  S + +++     R+G    A+ + + +  +     
Sbjct: 446 CLDYGKQIHCRA-----IRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECER 541
           W +++ A   HG  E    + E +LR  G  P  + YV + +  + AG  NE +R
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRA-GVEPDRITYVGVLSACSHAGFVNEGKR 554



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 40/345 (11%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  +   +   L  C+    +  G Q+H  +++   +++  + N LI  YAK G +  A
Sbjct: 292 SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENA 351

Query: 67  CAVFDKMLE---------------------------------RNVVSWTALMCGFLQNGN 93
             + D+ +E                                 R+VV+WTA++ G+ QNG 
Sbjct: 352 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 411

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + LF  M +   +PN +TL+  +     L+ ++ G QIH   ++S  E +  V N+
Sbjct: 412 NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNA 471

Query: 154 IIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           II MY++ G    A RMFD V   K  ITW +MI      G  ++ + LF +M   G  P
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T+   L AC   G V  G + +   I +    + +      +VD   + G   EA+ 
Sbjct: 532 DRITYVGVLSACSHAGFVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQE 590

Query: 273 VFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
               +  +   I+W SL+      +N AE  EL     E+ L +D
Sbjct: 591 FIRRMPVEPDAIAWGSLLSACRVHKN-AELAEL---AAEKLLSID 631



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 167/362 (46%), Gaps = 73/362 (20%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK----CGCLVEARR 272
           +   L+ C +  + G G  IH   + +G   S    +  +L+ +Y +     G L +ARR
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASA--YLCNNLLSYYGETAGGAGGLRDARR 86

Query: 273 VFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERS------------------ 312
           +FD I   +++V +W+SL+  +A+   LA+A  +F ++ ER                   
Sbjct: 87  LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146

Query: 313 --------LQVDGFVLS--SMMGVFADFALVEQG---KQIHAYAAKVPSGLDTSVSNSIV 359
                   +  DGF  +  ++  V +  A+ + G   +++H++  K+  G    V+NS++
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206

Query: 360 DMYLKCGLIDEATELFNEMPVKNV-------------------------------VTWTV 388
           +MY KCG  + AT +F  MPV++V                               V+W  
Sbjct: 207 NMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNA 266

Query: 389 IITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           +I GY ++GL  +A+ LF +ML +  + PD     +VLSAC++ G V   ++  + +   
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           + M    +  + ++ +  ++G ++ A+ ++ +SM    ++  +  LL      GD+E  R
Sbjct: 327 E-MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385

Query: 507 EV 508
           E+
Sbjct: 386 EM 387


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/674 (37%), Positives = 382/674 (56%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +++ GF  D+ + N LI MY KCG++  A  VFD+M  R+ 
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +N      L LF  M    V P+  T+++ I A   L     G ++HG 
Sbjct: 262 ISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGY 321

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GF     V NS+I M+S  G  +EA  +F  M  K L++W AMI+GY   G  +K 
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  +  M+  G +PDE T  S L AC  LG +  G  +H F   +G    V  ++A SL+
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYV--IVANSLI 439

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC C+ +A  VF  I  K+VISW+S+ILG        EA+  F+Q+   SL+ +  
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSV 498

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++   A    +  GK+IHA+A +   G D  + N+++DMY++CG ++ A   FN  
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC 558

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V +W +++TGY + G    AV LF KM+  DV PD + + ++L ACS SG+V +  
Sbjct: 559 E-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF  + +   + P ++HY+ +VD LGRAGRL++A   I+ MP+ P  AIW  LL+ACR+
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           + ++ELG    + +  +D  +   Y+++ N++AD+G W+E  R+RK+ R   L    G S
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F  GDD HP  ++I+ VL    ++M E  G          DI + SK E 
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKM-EATGLSMSKDSRRDDI-DASKAEI 795

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+LAI   L+    N  PG  I V KNL +C +CH  +K +SK+++    VRD  
Sbjct: 796 FCGHSERLAIAFGLI----NTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTE 851

Query: 679 RFHRFEGGVCSCGD 692
           +FH F+ GVCSCGD
Sbjct: 852 QFHHFKDGVCSCGD 865



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 261/500 (52%), Gaps = 10/500 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C        G ++H  + K      + L N L+ M+ + G++  A  VF KM ER++
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDL 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  L+ G+ + G     L+L+ +M    ++P+ +T    ++  G L  +  G ++H  
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  V N++I MY KCG I  A  +FD MP +  I+WNAMI+GY       +G
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M+E    PD  T TS + AC +LG    G ++HG++I +GF   V   +  SL+
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS--VNNSLI 338

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             +   GC  EA  VF  +E K ++SW+++I GY +     +A+E +  +    +  D  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A   L+++G  +H +A +        V+NS++DMY KC  ID+A E+F+ +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KNV++WT II G   +  + EA+  F++M+L  ++P+ V  ++VLSAC+  G +   +
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGK 517

Query: 439 EYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           E  +      R     + +  + ++D   R GR++ A N   S   +  +A W  LL+  
Sbjct: 518 EIHAHAL---RTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGY 572

Query: 497 RVHGDLELGREVGEILLRLD 516
              G   L  E+   ++  D
Sbjct: 573 AQQGKGGLAVELFHKMIESD 592



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 166/369 (44%), Gaps = 47/369 (12%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V +   +A  L  C+   LLD G+ LH    + G +  +++ N LIDMY+KC  ++ A 
Sbjct: 393 VVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKAL 452

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF ++  +NV+SWT+++ G   N  +   L  F QM   S+KPN  TL + + A   + 
Sbjct: 453 EVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIG 511

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G +IH   +++G  ++  + N+++DMY +CGR+  A   F+    K + +WN ++ 
Sbjct: 512 ALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLT 570

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLIT 242
           GY   G     + LF KM E    PDE TFTS L AC   G V  G +      H F I 
Sbjct: 571 GYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIA 630

Query: 243 SGFPYSVKTV----IAGSLVDFY------------VKCGCLVEARRVFDLIE-------- 278
               +    V     AG L D Y               G L+ A R++  +E        
Sbjct: 631 PNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQH 690

Query: 279 -----QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                 KSV  +  L   YA      E   + + +RE  L VD              + V
Sbjct: 691 IFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD-----------PGCSWV 739

Query: 334 EQGKQIHAY 342
           E   Q+HA+
Sbjct: 740 EVAGQVHAF 748



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 13/356 (3%)

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I    L G  +K L+    MQE     +E T+ + L+ C    +   G+++H ++  
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +     V+  +  +L+  +V+ G LVEA  VF  + ++ + SW+ L+ GYA+     EA+
Sbjct: 123 TVTRLGVR--LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEAL 180

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            L+ ++    ++ D +    ++        + +G+++H +  +     D  V N+++ MY
Sbjct: 181 NLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMY 240

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           +KCG I  A  +F+ MP ++ ++W  +I+GY ++ +  E + LF  M    V+PD +   
Sbjct: 241 VKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMT 300

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIE 478
           +V+SAC   G      E   R  +   +K        + +SL       G  DEA+ +  
Sbjct: 301 SVISACEALG-----DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            M  K  ++ W  ++S    +G  E   E   I +  +G  P    + S + A AG
Sbjct: 356 KMEFKDLVS-WTAMISGYEKNGLPEKAVETYTI-MEHEGVVPDEITIASVLSACAG 409



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 5/184 (2%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL      L   L  C++   L  G ++H   ++ G  FD  L N L+DMY +CG M  
Sbjct: 491 LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A   F+   E++V SW  L+ G+ Q G     + LF +M  S V P+E T ++ + A   
Sbjct: 551 AWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA-KSLITW 182
              V +G++ +   M+  F   P + +  S++D+  + GR+ +A      MP       W
Sbjct: 610 SGMVTDGLE-YFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIW 668

Query: 183 NAMI 186
            A++
Sbjct: 669 GALL 672


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/695 (33%), Positives = 393/695 (56%), Gaps = 19/695 (2%)

Query: 1   MNRVSF-SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
           +N+  F SL+S    L D+           YG  +H  + K GF  D++++N  + MY K
Sbjct: 88  LNQFIFASLISAAASLGDN----------HYGESIHACVCKYGFESDILISNAFVTMYMK 137

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
              +      F  M+  N+ S   L+ GF           +  Q+     +PN +T  + 
Sbjct: 138 TQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISI 197

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +K       +  G  IHG  +KSG   +  + NS++++Y+KCG  N A ++F  +P + +
Sbjct: 198 LKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 257

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++W A+I G+V  GY   GL +F +M   G  P+ +TF S L++C SL  V  G Q+H  
Sbjct: 258 VSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 316

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           ++ +    +    +  +LVD Y K   L +A  +F+ + ++ + +W+ ++ GYAQ+    
Sbjct: 317 IVKNSLDGN--DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           +A++ F Q++   ++ + F L+S +   +  A ++ G+Q+H+ A K     D  V++++V
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY KCG +++A  +F+ +  ++ V+W  II GY +HG   +A+  F  ML +   PD V
Sbjct: 435 DMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEV 494

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            ++ VLSACSH GL+EE +++F+ L     + P IEHY+C+VD LGRAG+  E ++ IE 
Sbjct: 495 TFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEE 554

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           M +  ++ IW+T+L AC++HG++E G      L  L+ +   NY+++SN+ A  G W++ 
Sbjct: 555 MKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDV 614

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
             +R L  ++G+KK  G SWVEV+ ++H F   D +HP   +IH  L ++ +++   +G+
Sbjct: 615 TNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLM-SVGY 673

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
                + LH++ +  K+E L  HSE+LA+  AL    L+    K IR+FKNLR+CGDCH+
Sbjct: 674 TPNTDHVLHNVSDREKQELLFYHSERLALAFAL----LSTSTRKTIRIFKNLRICGDCHD 729

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           F+K +S+I     VVRD   FH F+ G CSC ++W
Sbjct: 730 FMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 225/463 (48%), Gaps = 5/463 (1%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           ++K G   D  L + L+++Y KC  +  A  V ++M  ++V  W   +         +  
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           + LF  M  + ++ N+F  ++ I A+  L     G  IH    K GFE + ++ N+ + M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y K   +    + F  M  ++L + N +++G+      D+G  +  ++   G  P+ +TF
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S LK C S G +  G  IHG +I SG   +  + +  SLV+ Y KCG    A +VF  I
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGI--NPDSHLWNSLVNVYAKCGSANYACKVFGEI 252

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
            ++ V+SW++LI G+   E     + +F Q+       + +   S++   +  + V+ GK
Sbjct: 253 PERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           Q+HA   K     +  V  ++VDMY K   +++A  +FN +  +++  WTVI+ GY + G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             ++AV  F +M  + V+P+     + LS CS    ++  ++  S      +        
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV-A 430

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           S +VD   + G +++A+ + + +  + +++ W T++     HG
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQHG 472


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/638 (38%), Positives = 373/638 (58%), Gaps = 18/638 (2%)

Query: 68  AVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +F+K  +R +V SW +L+    + G++   L  F  M    +KPN  T    IK+   L
Sbjct: 36  TLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             + +G Q H   +  GFE +  V +++IDMYSKCG+++ A  +FD +P ++++TW ++I
Sbjct: 96  FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155

Query: 187 AGYVLAGYSDKGLLLFRKM---------QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            GYV    + + L++F++          +E G   D     S L AC  + +      +H
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G  I  G    +   +  +L+D Y KCG +  +R+VFD + +K V+SW+S+I  YAQ   
Sbjct: 216 GVAIKVGLDKVMG--VENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGL 273

Query: 298 LAEAMELFR-QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
             +A E+F   L+    + +   LS+++   A    +  G  +H    K+    +  ++ 
Sbjct: 274 STDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMAT 333

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           SI+DMY KCG  + A   F+ M  KNV +WT +I GYG HG A+EA+ +F +M+   V+P
Sbjct: 334 SIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKP 393

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + + +++VL+ACSH+G +EE   +F+ + ++  ++P +EHY C+VD LGRAG + EA NL
Sbjct: 394 NYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNL 453

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I+SM V+    +W +LL+ACR+H D+EL       L +LD  N   YV+++NI+ADAG W
Sbjct: 454 IKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRW 513

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            + ER+R L + +GL K  G S VE+   +H F  GD  HP  EKI++ L E+  ++ +E
Sbjct: 514 KDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKL-QE 572

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
            G+V  +   LHD+ EE KE  +RVHSEKLA+      G +N  PG  I V KNLRVCGD
Sbjct: 573 AGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAF----GVMNSIPGSTIHVIKNLRVCGD 628

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH  IK +SKI+    +VRDA RFH F+ G+CSCGDYW
Sbjct: 629 CHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 220/429 (51%), Gaps = 20/429 (4%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R     +++ CS    L+ G Q H   +  GF  DL +++ LIDMY+KCG+++ A  +FD
Sbjct: 82  RSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFD 141

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS---- 127
           ++  RN+V+WT+L+ G++QN +A   L +F +      + N   + T++ +  ++S    
Sbjct: 142 EIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSA 201

Query: 128 -------SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
                  +V  G  +HG+ +K G +    V N+++D Y+KCG ++ + ++FD M  K ++
Sbjct: 202 CSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVV 259

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           +WN+MIA Y   G S     +F  M +  G   +E T ++ L AC   G++  G  +H  
Sbjct: 260 SWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQ 319

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I  G+  +V  ++A S++D Y KCG    AR  FD +++K+V SW+++I GY       
Sbjct: 320 VIKMGYVNNV--IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAR 377

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSI 358
           EA+++F Q+    ++ +     S++   +    +E+G +  +A + +            +
Sbjct: 378 EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCM 437

Query: 359 VDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           VD+  + G I EA  L   M V ++ V W  ++     H   + A    R++    ++P 
Sbjct: 438 VDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELF--KLDPS 495

Query: 418 GVAYLAVLS 426
              Y  +L+
Sbjct: 496 NCGYYVLLA 504


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/677 (35%), Positives = 385/677 (56%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G  +H  L   G   + +    L +MYAKC     A  VFD+M  R+ 
Sbjct: 66  LKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDR 125

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W AL+ G+ +NG A+  + +  +M      +P+  TL + + A     ++    + H 
Sbjct: 126 VAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHA 185

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++SG E    V  +I+D Y KCG I  A  +FD MP K+ ++WNAMI GY   G S +
Sbjct: 186 FAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF +M E G    + +  + L+ACG LG +  G ++H  L+  G   +V   +  +L
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS--VMNAL 303

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KC  +  A  VFD +++++ +SW+++ILG AQ     +A+ LF +++  +++ D 
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L S++   AD +   Q + IH Y+ ++    D  V  +++DMY KCG ++ A  LFN 
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              ++V+TW  +I GYG HG  K AV LF +M    + P+   +L+VLSACSH+GLV+E 
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +EYF+ +  D  ++P +EHY  +VD LGRAG+LDEA   I+ MP+ P ++++  +L AC+
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACK 543

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H ++EL  E  + +  L     V +V+++NI+A+A  W +  R+R      GL+K  G 
Sbjct: 544 LHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGW 603

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +++  EIH FY G   H   ++I+  L ++ + +K  +G+V     ++HD++++ K +
Sbjct: 604 SIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK-AVGYVPDTD-SIHDVEDDVKAQ 661

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSEKLAI   L+R      PG  I++ KNLRVC DCH   K +S +     ++RD 
Sbjct: 662 LLNTHSEKLAIAFGLIRTA----PGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSCGDYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 213/412 (51%), Gaps = 17/412 (4%)

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
           A L+ F  M S+   P   T ++ +K       +  G  +H      G +   +   ++ 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDE 214
           +MY+KC R  +A R+FD MP +  + WNA++AGY   G +   + +  +MQ E GE PD 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  S L AC +  ++    + H F I SG    V   +A +++D Y KCG +  AR VF
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVN--VATAILDAYCKCGDIRAARVVF 219

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D +  K+ +SW+++I GYAQ  +  EA+ LF ++ E  + V    + + +    +   ++
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 335 QGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +G ++H    ++  GLD++VS  N+++ MY KC  +D A+ +F+E+  +  V+W  +I G
Sbjct: 280 EGMRVHELLVRI--GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             ++G +++AV LF +M L++V+PD    ++V+ A     L + S    +R  +   ++ 
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRL 392

Query: 453 RIEH----YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++      + ++D   + GR++ A+ L  S   +  I  W  ++     HG
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT-WNAMIHGYGSHG 443



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 142/255 (55%), Gaps = 5/255 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C +   LD G+++H  LV++G   ++ + N LI MY+KC  ++ A  VFD++  R 
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT 327

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSW A++ G  QNG ++  + LF +M   +VKP+ FTL + I A   +S       IHG
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++   + +  V  ++IDMY+KCGR+N A  +F+    + +ITWNAMI GY   G+   
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            + LF +M+  G +P+E TF S L AC   G V  G +   +  +    Y ++  +   G
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE---YFTSMKEDYGLEPGMEHYG 504

Query: 256 SLVDFYVKCGCLVEA 270
           ++VD   + G L EA
Sbjct: 505 TMVDLLGRAGKLDEA 519


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/677 (35%), Positives = 385/677 (56%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G  +H  L   G   + +    L +MYAKC     A  VFD+M  R+ 
Sbjct: 66  LKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDR 125

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W AL+ G+ +NG A+  + +  +M      +P+  TL + + A     ++    + H 
Sbjct: 126 VAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHA 185

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++SG E    V  +I+D Y KCG I  A  +FD MP K+ ++WNAMI GY   G S +
Sbjct: 186 FAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSRE 245

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF +M E G    + +  + L+ACG LG +  G ++H  L+  G   +V   +  +L
Sbjct: 246 ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVS--VMNAL 303

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KC  +  A  VFD +++++ +SW+++ILG AQ     +A+ LF +++  +++ D 
Sbjct: 304 ITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L S++   AD +   Q + IH Y+ ++    D  V  +++DMY KCG ++ A  LFN 
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              ++V+TW  +I GYG HG  K AV LF +M    + P+   +L+VLSACSH+GLV+E 
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +EYF+ +  D  ++P +EHY  +VD LGRAG+LDEA   I+ MP+ P ++++  +L AC+
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACK 543

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H ++EL  E  + +  L     V +V+++NI+A+A  W +  R+R      GL+K  G 
Sbjct: 544 LHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGW 603

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +++  EIH FY G   H   ++I+  L ++ + +K  +G+V     ++HD++++ K +
Sbjct: 604 SIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK-AVGYVPDTD-SIHDVEDDVKAQ 661

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSEKLAI   L+R      PG  I++ KNLRVC DCH   K +S +     ++RD 
Sbjct: 662 LLNTHSEKLAIAFGLIRTA----PGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSCGDYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 213/412 (51%), Gaps = 17/412 (4%)

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
           A L+ F  M S+   P   T ++ +K       +  G  +H      G +   +   ++ 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDE 214
           +MY+KC R  +A R+FD MP +  + WNA++AGY   G +   + +  +MQ E GE PD 
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  S L AC +  ++    + H F I SG    V   +A +++D Y KCG +  AR VF
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVN--VATAILDAYCKCGDIRAARVVF 219

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D +  K+ +SW+++I GYAQ  +  EA+ LF ++ E  + V    + + +    +   ++
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 335 QGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +G ++H    ++  GLD++VS  N+++ MY KC  +D A+ +F+E+  +  V+W  +I G
Sbjct: 280 EGMRVHELLVRI--GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             ++G +++AV LF +M L++V+PD    ++V+ A     L + S    +R  +   ++ 
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRL 392

Query: 453 RIEH----YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++      + ++D   + GR++ A+ L  S   +  I  W  ++     HG
Sbjct: 393 HLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT-WNAMIHGYGSHG 443



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 142/255 (55%), Gaps = 5/255 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C +   LD G+++H  LV++G   ++ + N LI MY+KC  ++ A  VFD++  R 
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT 327

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSW A++ G  QNG ++  + LF +M   +VKP+ FTL + I A   +S       IHG
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++   + +  V  ++IDMY+KCGR+N A  +F+    + +ITWNAMI GY   G+   
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            + LF +M+  G +P+E TF S L AC   G V  G +   +  +    Y ++  +   G
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE---YFTSMKEDYGLEPGMEHYG 504

Query: 256 SLVDFYVKCGCLVEA 270
           ++VD   + G L EA
Sbjct: 505 TMVDLLGRAGKLDEA 519


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/679 (35%), Positives = 383/679 (56%), Gaps = 10/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LER 76
           L+ CS    L  G  +H     +G S DL ++  L+ MYAKCG +  A  +F+ +   +R
Sbjct: 114 LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           ++V+W A++  F  +      +    QM  + V PN  TL + +   G  +++  G  IH
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIH 233

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +++ F  N V+  +++DMY+KC  +  A ++F+ +  K+ + W+AMI GYVL     
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSIS 293

Query: 197 KGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
             L L+  M   +G  P   T  + L+AC  L  +  G ++H  +I SG    + T +  
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGM--DLDTTVGN 351

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           SL+  Y KCG +  A    D +  K  +S+S++I G  Q     +A+ +FRQ++   +  
Sbjct: 352 SLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAP 411

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
               + +++   +  A ++ G   H Y        DTS+ N+I+DMY KCG I  + E+F
Sbjct: 412 YLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIF 471

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  +++++W  +I GYG HGL  EA+ LF+++    ++PD V  +AVLSACSHSGLV 
Sbjct: 472 DRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVT 531

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E + +FS +  +  +KPR+ HY C+VD L RAG LDEA   I+ MP  P++ IW  LL+A
Sbjct: 532 EGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR H ++E+G +V + +  L  +   N+V+MSNI++  G W++   +R + R  G KK  
Sbjct: 592 CRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSP 651

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SWVE+   IH F GG  +HP +  I++ L E+  +MK +LG+     + LHD++EE K
Sbjct: 652 GCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMK-KLGYRADSSFVLHDVEEEEK 710

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEK+AI      G LN  P   I V KNLR+C DCH  IK ++ + +    VR
Sbjct: 711 EQILLYHSEKVAIAF----GILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVR 766

Query: 676 DATRFHRFEGGVCSCGDYW 694
           DA+RFH F+ G+C+C D+W
Sbjct: 767 DASRFHHFKDGICNCQDFW 785



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 236/468 (50%), Gaps = 21/468 (4%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
            E+  A  VFD++ + +VV W  ++  +  +G  +  + L+  M    V P  FT    +
Sbjct: 55  NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--KS 178
           KA   L +++ G  IH      G   +  V  +++ MY+KCG + +A  +F+ +    + 
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++ WNAMIA +       + +    +MQ+ G  P+  T  S L   G   ++  G  IH 
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA 234

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           + I + F  +V  V+  +L+D Y KC  L  AR++F+ + +K+ + WS++I GY   +++
Sbjct: 235 YYIRNFFFDNV--VLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292

Query: 299 AEAMELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           ++A+ L+   L    L      L++M+   A    +++GK++H +  K    LDT+V NS
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KCG++D A    +EM  K+ V+++ II+G  ++G A++A+ +FR+M    + P 
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412

Query: 418 GVAYLAVLSACSHSGLVEESQ-----EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
               +A+L ACSH   ++               ND  +       + I+D   + G++  
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSI------CNAIIDMYSKCGKITI 466

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLD 516
           ++ + + M  +  I+ W T++    +HG     L L +E+  + L+ D
Sbjct: 467 SREIFDRMQNRDIIS-WNTMIIGYGIHGLCVEALSLFQELQALGLKPD 513



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 177/339 (52%), Gaps = 17/339 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  LR C++   L  G +LH  ++K G   D  + N LI MYAKCG M+ A    D+M+
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMI 374

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++A++ G +QNG A+  L +F QM SS + P   T+   + A   L+++++G  
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTC 434

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  GF  +  + N+IIDMYSKCG+I  +  +FD M  + +I+WN MI GY + G 
Sbjct: 435 CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGL 494

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF+++Q  G  PD+ T  + L AC   G V  G     +  +    +++K  +A
Sbjct: 495 CVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKY---WFSSMSQNFNIKPRMA 551

Query: 255 G--SLVDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLILGYAQEENLAEAMELFRQL 308
               +VD   + G L EA   +  I++   +     W +L+      +N+    ++ +++
Sbjct: 552 HYICMVDLLARAGNLDEA---YTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKI 608

Query: 309 RERSLQVDG-FVL----SSMMGVFADFALVEQGKQIHAY 342
           +    +  G FVL     S +G + D A +   ++ H Y
Sbjct: 609 QLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGY 647



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/315 (19%), Positives = 135/315 (42%), Gaps = 11/315 (3%)

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           A  L  +++    +  AR VFD I + SV+ W+ +I  YA      +++ L+  + +  +
Sbjct: 44  ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
               F    ++   +    ++ G+ IH +A  +   +D  VS +++ MY KCG + +A  
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163

Query: 374 LFNEMPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
           LFN +    +++V W  +I  +  H L  + +    +M    V P+    +++L     +
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             + + +   +    +      +   + ++D   +   L  A+ +  ++  K  +  W  
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQ-TALLDMYAKCHLLFYARKIFNTVNKKNDVC-WSA 281

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           ++    +H  +     + + +L + G NP    + + + A       C +L  L R K L
Sbjct: 282 MIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRA-------CAQLTDLKRGKKL 334

Query: 552 KKVAGRSWVEVDKEI 566
                +S +++D  +
Sbjct: 335 HCHMIKSGMDLDTTV 349


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/696 (36%), Positives = 397/696 (57%), Gaps = 41/696 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  ++K G        + LI+  A    G ++ A  +F+ + + N   W  ++ G   
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +    +  + +M    V+PN +T    +K+   + + + G QIHG  +K G E +P V
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I+MY++ G                                +++A R+F+ +P +  
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMIAGY  +G  ++ L  F++M+     P+E T  + L AC   GS+  G  +  +
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   G   +++ V A  L+D Y KCG L +AR +F+ I +K +ISW+ +I GY+   +  
Sbjct: 290 IEDHGLGSNLRLVNA--LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL-DTSVSNSI 358
           EA+ LFR++++ +++ +     S++   A    ++ GK IHAY  K   GL +TS+  S+
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG I+ A ++F  M  K++ +W  +I+G   HG A  A+ LFR+M  +  EPD 
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           + ++ VLSACSH+GLVE  ++ FS +  D  + P+++HY C++D LGRAG  DEA+ L++
Sbjct: 468 ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           +M +KP  AIW +LL ACRVHG++ELG    + L  L+ +NP  YV++SNI+A AG W++
Sbjct: 528 NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
             R+R     KG+KKV G S +EVD  +H F  GD  H  ++ I+++L E+++ + E+ G
Sbjct: 588 VARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLL-EKAG 646

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
            V      L+D+ EE KE SL  HSEKLAI   L+    + +P   IR+ KNLRVCG+CH
Sbjct: 647 HVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLI----STKPETTIRIVKNLRVCGNCH 702

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IK +SKI     + RD  RFH F+ G CSC DYW
Sbjct: 703 SAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 238/485 (49%), Gaps = 48/485 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK------ 72
           L+ C+K      G Q+HG ++K+G   D  ++  LI+MYA+ GE+  A  VF K      
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198

Query: 73  ---------------------MLE----RNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
                                + E    R+ VSW A++ G+ Q+G  +  L+ F +M  +
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           +V PNE T+ T + A     S+E G  +       G   N  + N++IDMYSKCG +++A
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKA 318

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ +  K +I+WN MI GY       + L LFRKMQ+    P++ TF S L AC  L
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYL 378

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G  IH + I   F     T +  SL+D Y KCG +  A++VF  ++ KS+ SW++
Sbjct: 379 GALDLGKWIHAY-IDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I G A   +   A+ELFRQ+R+   + D      ++   +   LVE G+Q  +   +  
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-- 495

Query: 348 SGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
              D  +S  +      +D+  + GL DEA  L   M +K +   W  ++     HG  +
Sbjct: 496 ---DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE 552

Query: 401 EAVGLFRKMLLDDVEPDGV-AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
             +G F    L ++EP+   AY+ + +  + +G  ++     ++L NDK MK      S 
Sbjct: 553 --LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKL-NDKGMKKVPGCSSI 609

Query: 460 IVDSL 464
            VDS+
Sbjct: 610 EVDSV 614


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/709 (34%), Positives = 391/709 (55%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  YAK G+M+ +C  FD++ +R+ VSWT ++ G+   G     + +  +M    ++
Sbjct: 84  NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P++FTL+  + +      +E G ++H   +K G   N  V NS+++MY+KCG        
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  +++ A   F+ M  + ++TWN+MI+GY   GY  + L
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS---------- 248
            +F KM     + PD FT  S L AC +L  +  G QIH  ++T+GF  S          
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323

Query: 249 ------VKTV-------------IAG--SLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                 V+T              I G  +L+D Y+K G + EA+ +FD ++ + V++W++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTA 383

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q     EA+ LFR +     + + + L++M+ V +  A +  GKQIH  A K  
Sbjct: 384 MIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG 443

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLF 406
                SVSN+++ MY K G I  A+  F+ +   ++ V+WT +I    +HG A+EA+ LF
Sbjct: 444 EIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             ML++ + PD + Y+ V SAC+H+GLV + ++YF  + +  ++ P + HY+C+VD  GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG L EA+  IE MP++P +  W +LLSACRV+ +++LG+   E LL L+ +N   Y  +
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSAL 623

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G W E  ++RK  +   +KK  G SW+EV  ++H F   D  HP   +I+  +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITM 683

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
            ++   +K ++G+V      LHD++EE KE+ LR HSEKLAI       GL   P K  +
Sbjct: 684 KKIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAF-----GLISTPDKTTL 737

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  IK +SK++    +VRD TRFH F+ G CSC DYW
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 240/508 (47%), Gaps = 78/508 (15%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG------------- 61
           L + L   +    L+ G ++H  +VK+G   ++ ++N L++MYAKCG             
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208

Query: 62  ------------------EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                             +M+ A A F++M ER++V+W +++ G+ Q G     L +F +
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268

Query: 104 M-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           M   S + P+ FTL++ + A   L  +  G QIH   + +GF+ + +V N++I MYS+CG
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328

Query: 163 RI---------------------------------NEAARMFDVMPAKSLITWNAMIAGY 189
            +                                 NEA  +FD +  + ++ W AMI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G   + + LFR M    + P+ +T  + L    SL S+G G QIHG  + SG  YSV
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSV 448

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++ +L+  Y K G +  A R FDLI  ++  +SW+S+I+  AQ  +  EA+ELF  +
Sbjct: 449 S--VSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT-SVSNSIVDMYLKCGL 367
               L+ D      +        LV QG+Q       V   + T S    +VD++ + GL
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566

Query: 368 IDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           + EA E   +MP++ +VVTW  +++    Y    L K A     ++LL + E  G AY A
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAA---ERLLLLEPENSG-AYSA 622

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMK 451
           + +  S  G  EE+ +   +   D R+K
Sbjct: 623 LANLYSACGKWEEAAK-IRKSMKDGRVK 649



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 38/318 (11%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------- 60
           L  +R  LA  L  C+    L  G Q+H  +V  GF    ++ N LI MY++C       
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334

Query: 61  --------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
                                     G+MN A  +FD + +R+VV+WTA++ G+ Q+G  
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLY 394

Query: 95  KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSI 154
              ++LF  M     +PN +TL+  +  +  L+S+ +G QIHG  +KSG  ++  V N++
Sbjct: 395 GEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNAL 454

Query: 155 IDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           I MY+K G I  A+R FD++   +  ++W +MI      G++++ L LF  M   G  PD
Sbjct: 455 ITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARR 272
             T+     AC   G V  G Q   F +       + T+     +VD + + G L EA+ 
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 273 VFDLIE-QKSVISWSSLI 289
             + +  +  V++W SL+
Sbjct: 573 FIEKMPIEPDVVTWGSLL 590



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 10/191 (5%)

Query: 7   SLVSERQR-----LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           S+V E QR     LA  L   S    L +G Q+HG+ VK G  + + ++N LI MYAK G
Sbjct: 403 SMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462

Query: 62  EMNGACAVFDKM-LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
            +  A   FD +  ER+ VSWT+++    Q+G+A+  L LF  M    ++P+  T     
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK- 177
            A      V  G Q   M MK   +  P + +   ++D++ + G + EA    + MP + 
Sbjct: 523 SACTHAGLVNQGRQYFDM-MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 178 SLITWNAMIAG 188
            ++TW ++++ 
Sbjct: 582 DVVTWGSLLSA 592


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/677 (35%), Positives = 388/677 (57%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G  +H  L   G S + +    L +MYAKC     A  VFD+M  R+ 
Sbjct: 232 LKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDR 291

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W AL+ G+ +NG A+A + +  +M      +P+  TL + + A     ++    ++H 
Sbjct: 292 VAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHA 351

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ GF+    V  +I+D+Y KCG ++ A ++FD M  ++ ++WNAMI GY   G + +
Sbjct: 352 FAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATE 411

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF++M   G    + +  + L ACG LG +  G ++H  L+  G   +V   +  +L
Sbjct: 412 ALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN--VMNAL 469

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KC     A +VFD +  K+ +SW+++ILG  Q  +  +A+ LF +++  +++ D 
Sbjct: 470 ITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDS 529

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L S++   AD +   Q + IH Y+ ++    D  V  +++DMY KCG +  A  LFN 
Sbjct: 530 FTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS 589

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              ++V+TW  +I GYG HG  K AV LF +M      P+   +L+VLSACSH+GLV+E 
Sbjct: 590 ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           QEYFS +  D  ++P +EHY  +VD LGRAG+L EA + I+ MP++P I+++  +L AC+
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK 709

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H ++EL  E  + +  L+ +  V +V+++NI+A+A  W +  R+R     KGL+K  G 
Sbjct: 710 LHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGW 769

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S V++  EIH FY G   H   + I+  L ++ + +K  +G+V     ++HD++++ K +
Sbjct: 770 SIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIK-AVGYVPDTD-SIHDVEDDVKAQ 827

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSEKLAI   L+R      PG  I++ KNLRVC DCH   K +S +     ++RD 
Sbjct: 828 LLNTHSEKLAIAYGLIRTA----PGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDI 883

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSCGDYW
Sbjct: 884 QRFHHFKDGKCSCGDYW 900



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 95  KACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           +  L+ F  M  +S   P   T ++ +K     + +  G  +H      G     +   +
Sbjct: 206 RGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATA 265

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH-GEIP 212
           + +MY+KC R  +A R+FD MPA+  + WNA++AGY   G ++  + +  +MQE  GE P
Sbjct: 266 LANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERP 325

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L AC    ++G   ++H F +  GF   V   ++ +++D Y KCG +  AR+
Sbjct: 326 DAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN--VSTAILDVYCKCGAVDSARK 383

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD ++ ++ +SW+++I GYA+  +  EA+ LF+++    + V    + + +    +   
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +++G+++H    ++    + +V N+++ MY KC   D A ++F+E+  K  V+W  +I G
Sbjct: 444 LDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG 503

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             ++G +++AV LF +M L++V+PD    ++++ A     L + S    +R  +   ++ 
Sbjct: 504 CTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA-----LADISDPLQARWIHGYSIRL 558

Query: 453 RIEH----YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++      + ++D   + GR+  A++L  S   +  I  W  ++     HG  ++  E+
Sbjct: 559 HLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVIT-WNAMIHGYGSHGSGKVAVEL 617

Query: 509 GE 510
            E
Sbjct: 618 FE 619



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 193/369 (52%), Gaps = 5/369 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L    ++H   V+ GF   + ++  ++D+Y KCG ++ A  VFD M 
Sbjct: 330 LVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQ 389

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +RN VSW A++ G+ +NG+A   L+LF +M    V   + ++   + A G L  ++ G +
Sbjct: 390 DRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRR 449

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + ++ G E N  V N++I MY KC R + AA++FD +  K+ ++WNAMI G    G 
Sbjct: 450 VHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGS 509

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S+  + LF +MQ     PD FT  S + A   +        IHG+ I       V  + A
Sbjct: 510 SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTA 569

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y KCG +  AR +F+    + VI+W+++I GY    +   A+ELF +++     
Sbjct: 570 --LIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV 627

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            +     S++   +   LV++G++  + + K   GL+  + +  ++VD+  + G + EA 
Sbjct: 628 PNETTFLSVLSACSHAGLVDEGQEYFS-SMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAW 686

Query: 373 ELFNEMPVK 381
               +MP++
Sbjct: 687 SFIQKMPME 695



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 177/349 (50%), Gaps = 13/349 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C +   LD G ++H  LV++G   ++ + N LI MY KC   + A  VFD++  + 
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKT 493

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSW A++ G  QNG+++  + LF +M   +VKP+ FTL + I A   +S       IHG
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHG 553

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++   + +  V  ++IDMY+KCGR++ A  +F+    + +ITWNAMI GY   G    
Sbjct: 554 YSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKV 613

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            + LF +M+  G++P+E TF S L AC   G V  G +   +  +    Y ++  +   G
Sbjct: 614 AVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE---YFSSMKEDYGLEPGMEHYG 670

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           ++VD   + G L EA      +  +  IS    +LG  +   L + +EL  +  +R  ++
Sbjct: 671 TMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK---LHKNVELAEESAQRIFEL 727

Query: 316 ---DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
              +G     +  ++A+ +L +   ++     K   GL  +   SIV +
Sbjct: 728 EPEEGVYHVLLANIYANASLWKDVARVRTAMEK--KGLQKTPGWSIVQL 774


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/668 (36%), Positives = 390/668 (58%), Gaps = 16/668 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++H   +K GF +D+ +   LI +Y + G +  A  +FD+M  R++ SW A++ G+ Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 91  NGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +GNAK  L+L     S  ++  +  T+ + + A         G+ IH   +K G E    
Sbjct: 229 SGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N +ID+Y++ G + +  ++FD M  + LI+WN++I  Y L     + +LLF++M+   
Sbjct: 284 VSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSR 343

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD  T  S       LG +     + GF +  G+ +     I  ++V  Y K G +  
Sbjct: 344 IQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGW-FLEDITIGNAVVVMYAKLGLVDS 402

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER--SLQVDGFVLSSMMGVF 327
           AR VF+ +  K VISW+++I GYAQ    +EA+E++  + E    +  +     S++   
Sbjct: 403 ARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPAC 462

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +    + QG ++H    K    LD  V  S+ DMY KCG +D+A  LF ++P  N V W 
Sbjct: 463 SQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWN 522

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I  +G HG  ++AV LF++ML + V+PD + ++ +LSACSHSGLV+E +  F  +  D
Sbjct: 523 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTD 582

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P ++HY C+VD  GRAG+L+ A N I+SMP++P  +IW  LLSACRVHG+++LG+ 
Sbjct: 583 YGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKI 642

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             E L  ++ ++   +V++SN++A AG W   + +R +   KGL+K  G S +EVD ++ 
Sbjct: 643 ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVE 702

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            FY G+ THP+ E++++ L  + +++K  +G+V   ++ L D++++ KE  L  HSE+LA
Sbjct: 703 VFYTGNQTHPMYEEMYRELTALHEKLK-MVGYVPDHRFVLQDVEDDEKEHILMSHSERLA 761

Query: 628 IGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           +  AL+       P K  IR+FKNLRVCGDCH   K +SKI +   +VRD+ RFH F+ G
Sbjct: 762 MAFALI-----TTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNG 816

Query: 687 VCSCGDYW 694
           VCSCGDYW
Sbjct: 817 VCSCGDYW 824



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 214/414 (51%), Gaps = 11/414 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++    + GV +H   +K G   +L ++N LID+YA+ G +     VFD+M  R++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDL 313

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++  +  N      + LF +M  S ++P+  TL +       L  +     + G 
Sbjct: 314 ISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGF 373

Query: 139 CMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
            ++ G F  +  +GN+++ MY+K G ++ A  +F+ +P K +I+WN +I+GY   G++ +
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASE 433

Query: 198 GLLLFRKMQEH-GEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + ++  M+E  GEI  ++ T+ S L AC   G++  G ++HG L+ +G    V   +  
Sbjct: 434 AIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV--FVGT 491

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           SL D Y KCG L +A  +F  I + + + W++LI  +    +  +A+ LF+++ +  ++ 
Sbjct: 492 SLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 551

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           D     +++   +   LV++G+       +   G+  S+ +   +VD+Y + G ++ A  
Sbjct: 552 DHITFVTLLSACSHSGLVDEGEWCFE-MMQTDYGITPSLKHYGCMVDLYGRAGQLEIALN 610

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
               MP++ +   W  +++    HG     +G      L +VEP+ V Y  +LS
Sbjct: 611 FIKSMPLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLS 662



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 197/413 (47%), Gaps = 25/413 (6%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++++   +H   + S    N  +   ++++Y   G +  A   FD +  + +  WN MI
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 187 AGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +GY  AGYS + +  F   M   G  PD  TF S LKAC    +V  G +IH   +  GF
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGF 181

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            + V   +A SL+  Y + G +V AR +FD +  + + SW+++I GY Q  N  EA+ L 
Sbjct: 182 MWDV--YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYL 363
             LR     +D   + S++    +     +G  IH+Y+ K   GL++   VSN ++D+Y 
Sbjct: 240 DGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK--HGLESELFVSNKLIDLYA 293

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           + G + +  ++F+ M V+++++W  II  Y  +     A+ LF++M L  ++PD +  ++
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS 353

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           + S  S  G +   +               I   + +V    + G +D A+ +   +P K
Sbjct: 354 LASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK 413

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
             I+ W T++S    +G      E+  I+    G+          I A+ G+W
Sbjct: 414 DVIS-WNTIISGYAQNGFASEAIEMYNIMEEEGGE----------ISANQGTW 455


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/666 (34%), Positives = 389/666 (58%), Gaps = 7/666 (1%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G  +HG ++K+G+  +  +   LID Y+  G ++ A  VFD++  +++VSWT ++  +
Sbjct: 63  ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASY 122

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            +N      L  F QM  +  KPN FT +  +KA   L + + G  +H   +K+ +E + 
Sbjct: 123 AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDL 182

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG  ++++Y++CG  ++A R F  MP   +I W+ MI+ +  +G S+K L +F +M+  
Sbjct: 183 YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRA 242

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             IP++FTF+S L+A   + S+     IHG  + +G   S    ++ +L+  Y KCGC+ 
Sbjct: 243 FVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGL--STDVFVSNALMACYAKCGCIE 300

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           ++  +F+ +  ++ +SW+++I+ Y Q  +   A+ LF  +    +Q      SS++   A
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             A +E G Q+H   AK   G D +V N+++DMY KCG I +A  +F+ + +++ V+W  
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           II GY  HGL  EA+ +F  M     +PD + ++ VLSACS++G ++E ++YF+ +  D 
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P +EHY+C+V  +GR+G LD+A   IE +P +PS+ IW+ LL AC +H D+ELGR  
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            + +L L+  +  ++V++SNI+A A  W     +RK  + KG+KK  G SW+E    +H 
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHC 600

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D +H   + I+ +L  +  + ++  G+   +   L D++++ KE  L +HSE+LA+
Sbjct: 601 FTVADTSHADLKLINGMLEFLNMKTRKA-GYSPQLNAVLLDVEDDEKERLLWLHSERLAL 659

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              LVR       G  IR+ KNLR+C DCH  IK +SKI+    +VRD  RFH FE G C
Sbjct: 660 AFGLVR----MPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSC 715

Query: 689 SCGDYW 694
           SC DYW
Sbjct: 716 SCADYW 721



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 213/432 (49%), Gaps = 4/432 (0%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VFD+M ERN VS+  L+ G+ Q+        LF ++     + N F  +T +K    +  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
            E G  +HG  +K G+  N  +G ++ID YS  G ++ A  +FD + +K +++W  MIA 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y       + L  F +M+  G  P+ FTF   LKAC  L +   G  +H  ++ +   Y 
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN--YE 179

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +   L++ Y +CG   +A R F  + +  VI WS +I  +AQ     +A+E+F Q+
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R   +  + F  SS++   AD   ++  K IH +A K     D  VSN+++  Y KCG I
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +++ ELF  +  +N V+W  II  Y + G  + A+ LF  ML   V+   V Y ++L AC
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +    +E   +    L         +   + ++D   + G + +A+ + + + ++  ++ 
Sbjct: 360 ATLAALELGLQVHC-LTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS- 417

Query: 489 WQTLLSACRVHG 500
           W  ++    +HG
Sbjct: 418 WNAIICGYSMHG 429



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 209/379 (55%), Gaps = 6/379 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L+ C      D G  +H +++K  +  DL +   L+++Y +CG+ + A   F  M 
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + +V+ W+ ++  F Q+G ++  L +FCQM  + V PN+FT S+ ++AS  + S++    
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  +K+G   +  V N+++  Y+KCG I ++  +F+ +  ++ ++WN +I  YV  G 
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF  M  +     E T++S L+AC +L ++  G Q+H   +T+   Y     + 
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVH--CLTAKTIYGQDVAVG 387

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG + +AR +FD+++ +  +SW+++I GY+      EA+++F  ++E   +
Sbjct: 388 NALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCK 447

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEAT 372
            D      ++   ++   +++GKQ +  + K   G++  + +    ++L  + G +D+A 
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAV 506

Query: 373 ELFNEMPVK-NVVTWTVII 390
           +   ++P + +V+ W  ++
Sbjct: 507 KFIEDIPFEPSVMIWRALL 525



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 4/193 (2%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N + + + +     +  LR C+    L+ G+Q+H    K  +  D+ + N LIDMYAKCG
Sbjct: 339 NMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCG 398

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FD +  R+ VSW A++CG+  +G     + +F  M  +  KP+E T    + 
Sbjct: 399 SIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLS 458

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-S 178
           A      ++ G Q +   MK  +   P + +   ++ +  + G +++A +  + +P + S
Sbjct: 459 ACSNTGRLDEGKQ-YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPS 517

Query: 179 LITWNAMIAGYVL 191
           ++ W A++   V+
Sbjct: 518 VMIWRALLGACVI 530


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/698 (35%), Positives = 391/698 (56%), Gaps = 21/698 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+ +F  V         L+ CS    L  G  +H     +G   DL ++  LID+Y +C 
Sbjct: 98  NKYTFPFV---------LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCA 148

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNI 120
               A  VF KM  R+VV+W A++ G+  +G     ++    M     ++PN  TL + +
Sbjct: 149 RFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLL 208

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNP---VVGNSIIDMYSKCGRINEAARMFDVMPAK 177
                  ++  G  +H  C+++  + N    ++G +++DMY+KC  +  A R+F  M  +
Sbjct: 209 PLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR 268

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQI 236
           + +TW+A+I G+VL     +   LF+ M   G       +  S L+ C SL  +  GTQ+
Sbjct: 269 NEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL 328

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  L  SG    +      SL+  Y K G + EA  +FD I  K  IS+ +L+ GY Q  
Sbjct: 329 HALLAKSGIHADLTA--GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG 386

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              EA  +F++++  ++Q D   + S++   +  A ++ G+  H         L+TS+ N
Sbjct: 387 KAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN 446

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           S++DMY KCG ID + ++F++MP +++V+W  +I GYG HGL KEA  LF  M     EP
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEP 506

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           D V ++ +++ACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   
Sbjct: 507 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQF 566

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I+SMP+K  + +W  LL ACR+H +++LG++V  ++ +L  +   N+V++SNI + AG +
Sbjct: 567 IQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRF 626

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           +E   +R + + KG KK  G SW+E++  +H F GGD +HP +  I+  L  +   +K +
Sbjct: 627 DEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIK-K 685

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           LG+     + L D++EE KE++L  HSEKLAI   ++   LNE   K I V KNLRVCGD
Sbjct: 686 LGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVL--SLNED--KTIFVTKNLRVCGD 741

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH  IK ++ +     +VRDA RFH F+ G CSCGD+W
Sbjct: 742 CHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 241/463 (52%), Gaps = 18/463 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G++  A  VFD++   +  ++ AL+  +   G   A + L+  M    V PN++T    +
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L+ +  G  IH      G   +  V  ++ID+Y +C R   AA +F  MP + ++
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            WNAM+AGY   G     +     MQ+ G + P+  T  S L      G++  GT +H +
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 240 LITSGFPYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + +    + + V+ G+ L+D Y KC  LV A RVF  +  ++ ++WS+LI G+   + +
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 299 AEAMELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA  LF+  L E    +    ++S + V A  A +  G Q+HA  AK     D +  NS
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY K GLI+EAT LF+E+ +K+ +++  +++GY ++G A+EA  +F+KM   +V+PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR---IEHYSC--IVDSLGRAGRLDE 472
               ++++ ACSH   ++  +      C+   +  R   +E   C  ++D   + GR+D 
Sbjct: 407 IATMVSLIPACSHLAALQHGR------CSHGSVIIRGLALETSICNSLIDMYAKCGRIDL 460

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           ++ + + MP +  I  W T+++   +HG   LG+E   + L +
Sbjct: 461 SRQVFDKMPAR-DIVSWNTMIAGYGIHG---LGKEATTLFLSM 499


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/707 (35%), Positives = 375/707 (53%), Gaps = 77/707 (10%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           M+AK G +  A  VF +M ER+ VSWT ++ G  + G     +     M +    P +FT
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG------------- 162
           L+  + +  V  +   G ++H   +K G      V NS+++MY KCG             
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 163 ------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
                             R++ A  +F+ MP +S+++WNAMIAGY   G   K L LF +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 205 M-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--------- 254
           M  E    PDEFT TS L AC +LG+V  G Q+H +++ +   Y+ +   A         
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 255 ----------------------GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
                                  +L++ YVK G +  AR +F ++  + V++W+++I+GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
            Q     EA++LFR +     + + + L++++ V A  A ++ GKQIH  A +      +
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           SVSN+I+ MY + G    A  +F+++   K  +TWT +I    +HG  +EAVGLF +ML 
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             VEPD + Y+ VLSACSH+G V E + Y+ ++ N+ ++ P + HY+C+VD L RAG   
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           EA+  I  MPV+P    W +LLSACRVH + EL     E LL +D +N   Y  ++N+++
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
             G W++  R+ K  + K ++K  G SW  +  +IH F   D  HP  + ++     M  
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYA----MAA 596

Query: 592 RMKEEL---GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRV 647
           RM EE+   GFV  ++  LHD+ +E KEE L  HSEKLAI       GL   P K  +RV
Sbjct: 597 RMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAF-----GLISTPEKTTLRV 651

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLRVC DCH  IK +SK+     +VRDATRFH F  G+CSC DYW
Sbjct: 652 MKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 215/488 (44%), Gaps = 80/488 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L  C+       G ++H  +VK+G    + + N +++MY KCG+   A  VF++M 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 75  -------------------------------ERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                          +R++VSW A++ G+ QNG     L LF +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 104 M-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           M   SS+ P+EFT+++ + A   L +V  G Q+H   +++   +N  V N++I  Y+K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 163 RINEAAR---------------------------------MFDVMPAKSLITWNAMIAGY 189
            +  A R                                 MF VM  + ++ W AMI GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G +D+ + LFR M   G  P+ +T  + L  C SL  +  G QIH   I S    S 
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS- 359

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            + ++ +++  Y + G    ARR+FD +  +K  I+W+S+I+  AQ     EA+ LF ++
Sbjct: 360 -SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGK----QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
               ++ D      ++   +    V +GK    QI       P   + S    +VD+  +
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP---EMSHYACMVDLLAR 475

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            GL  EA E    MPV+ + + W  +++    H  A+ A     K+L  D    G AY A
Sbjct: 476 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG-AYSA 534

Query: 424 ---VLSAC 428
              V SAC
Sbjct: 535 IANVYSAC 542



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 40/345 (11%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  +   +   L  C+    +  G Q+H  +++   +++  + N LI  YAK G +  A
Sbjct: 186 SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENA 245

Query: 67  CAVFDKMLE---------------------------------RNVVSWTALMCGFLQNGN 93
             + D+ +E                                 R+VV+WTA++ G+ QNG 
Sbjct: 246 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 305

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + LF  M +   +PN +TL+  +     L+ ++ G QIH   ++S  E +  V N+
Sbjct: 306 NDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNA 365

Query: 154 IIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           II MY++ G    A RMFD V   K  ITW +MI      G  ++ + LF +M   G  P
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T+   L AC   G V  G + +   I +    + +      +VD   + G   EA+ 
Sbjct: 426 DRITYVGVLSACSHAGFVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQE 484

Query: 273 VFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
               +  +   I+W SL+      +N AE  EL     E+ L +D
Sbjct: 485 FIRRMPVEPDAIAWGSLLSACRVHKN-AELAEL---AAEKLLSID 525


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/679 (34%), Positives = 391/679 (57%), Gaps = 13/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALV-KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML-ER 76
           L  C+    L+ G  +H  +    G   D++L N L+ MYAKCG +  A  +F++M   R
Sbjct: 128 LGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRR 187

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +V SW A++  + Q+G+ +  + L+  M    V+P+  T ++ + A   L  ++ G +IH
Sbjct: 188 SVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIH 244

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            +    G E +  + N+++ MY++C  +++AA++F  +P + +++W+AMIA +      D
Sbjct: 245 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 304

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + +  + KMQ  G  P+ +TF S L AC S+G +  G  +H  ++ +G  Y +  V   +
Sbjct: 305 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG--YKITLVNGTA 362

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQV 315
           LVD Y   G L EAR +FD IE +    W+ LI GY+++ +    +EL+R+++  + +  
Sbjct: 363 LVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPA 422

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
              + S ++   A        +Q H+         D  ++ S+V+MY + G ++ A ++F
Sbjct: 423 TKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVF 482

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           ++M  ++ + WT +I GY KHG    A+GL+++M L+  EP  + ++ VL ACSH+GL E
Sbjct: 483 DKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQE 542

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           + ++ F  + +D  M P I HYSCI+D L RAGRL +A+ LI +MPV+P+   W +LL A
Sbjct: 543 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 602

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
            R+H D++        + +LD  +P +YV++SN+HA  G+      +R    ++G+KK  
Sbjct: 603 SRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRR 662

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EV  +IH F  GD++HP  ++I   L  +  ++KE  G+V   +  LHD+ E+ K
Sbjct: 663 GSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA-GYVPESEEVLHDVGEKEK 721

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  LR+HSEKLAI   L+       PG  +R+F  LR+C DCH  +K +S I +   +VR
Sbjct: 722 ELLLRLHSEKLAIAFGLIATA----PGTTLRIFNTLRICHDCHSAVKFISAIARREIIVR 777

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D++RFH+F  G CSCGDYW
Sbjct: 778 DSSRFHKFRDGQCSCGDYW 796



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/524 (27%), Positives = 273/524 (52%), Gaps = 30/524 (5%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D+LR C     L+   Q+H   +    S ++ L N+++  Y KCG +  A   FD +  +
Sbjct: 32  DALRQCQD---LESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARK 87

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N  SW +++  + QNG+ +A L L+ +M    ++PN    +T + A   + ++E G  IH
Sbjct: 88  NDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIH 144

Query: 137 G-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGY 194
             +    G + + ++ NS++ MY+KCG + +A R+F+ M   +S+ +WNAMIA Y  +G+
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGH 204

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ + L+  M      P   TFTS L AC +LG +  G +IH  + + G    +   + 
Sbjct: 205 FEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS--LQ 259

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y +C CL +A ++F  + ++ V+SWS++I  +A+ +   EA+E + +++   ++
Sbjct: 260 NALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVR 319

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            + +  +S++   A    +  G+ +H     + +G   ++ N  ++VD+Y   G +DEA 
Sbjct: 320 PNYYTFASVLLACASVGDLRAGRAVHDQI--LGNGYKITLVNGTALVDLYTSYGSLDEAR 377

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS 431
            LF+++  ++   WTV+I GY K G     + L+R+M     V    + Y  V+SAC+  
Sbjct: 378 SLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASL 437

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G   ++++  S +  D  +   +   S +V+   R G L+ A+ + + M  + ++A W T
Sbjct: 438 GAFADARQAHSDIEADGMISDFVLATS-LVNMYSRWGNLESARQVFDKMSSRDTLA-WTT 495

Query: 492 LLSACRVHGD----LELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           L++    HG+    L L +E     + L+G  P     M  ++A
Sbjct: 496 LIAGYAKHGEHGLALGLYKE-----MELEGAEPSELTFMVVLYA 534



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 7/279 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+    L  G  +H  ++  G+   L+    L+D+Y   G ++ A ++FD++ 
Sbjct: 325 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 384

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGM 133
            R+   WT L+ G+ + G+    L L+ +M +++  P  +   S  I A   L +  +  
Sbjct: 385 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 444

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q H      G   + V+  S+++MYS+ G +  A ++FD M ++  + W  +IAGY   G
Sbjct: 445 QAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 504

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                L L+++M+  G  P E TF   L AC   G    G Q+    I+    Y++   I
Sbjct: 505 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQL---FISIQSDYAMHPNI 561

Query: 254 A--GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           A    ++D   + G L +A  + + +  + + ++WSSL+
Sbjct: 562 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/670 (37%), Positives = 392/670 (58%), Gaps = 14/670 (2%)

Query: 31   GVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++H  +++ G + + + + N L++MYAK G +  AC+VF+ M+E++ VSW +L+ G  
Sbjct: 878  GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 937

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            QN  ++     F +M  +   P+ FTL + + +   L  +  G QIH   +K G + +  
Sbjct: 938  QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 997

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKMQEH 208
            V N+++ +Y++ G   E  ++F +MP    ++WN++I     +  S  + +  F +M   
Sbjct: 998  VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRG 1057

Query: 209  GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            G      TF + L A  SL       QIH  ++   +  S  T I  +L+  Y KCG + 
Sbjct: 1058 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK--YCLSDDTAIGNALLSCYGKCGEMN 1115

Query: 269  EARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            E  ++F  + E +  +SW+S+I GY   E L +AM+L   + ++  ++D F  ++++   
Sbjct: 1116 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSAC 1175

Query: 328  ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
            A  A +E+G ++HA   +     D  V +++VDMY KCG ID A+  F  MP++NV +W 
Sbjct: 1176 ASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWN 1235

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+GY +HG  ++A+ LF +M+LD   PD VA  L VLSACSH G VEE  E+F  +  
Sbjct: 1236 SMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSE 1295

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-DLEL 504
              R+ PR+EH+SC+VD LGRAG+LDE  + I SMP+KP++ IW+T+L A CR +G + EL
Sbjct: 1296 VYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTEL 1355

Query: 505  GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
            GR   E+LL L+  N VNYV+++N++A    W +  + R   +   +KK AG SWV +  
Sbjct: 1356 GRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKD 1415

Query: 565  EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
             +H F  GD  HP  + I+  L E+ ++M++  G++   KYAL D++ E+KEE L  HSE
Sbjct: 1416 GVHVFVAGDKLHPEKDXIYDKLRELNRKMRDA-GYIPQTKYALFDLELENKEELLSYHSE 1474

Query: 625  KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
            K+A+   L R     Q    IR+ KNLRVCGDCH     +SKI+    V+RD+ RFH FE
Sbjct: 1475 KIAVAFVLTR-----QSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFE 1529

Query: 685  GGVCSCGDYW 694
             G CSCGDYW
Sbjct: 1530 DGKCSCGDYW 1539



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 230/434 (52%), Gaps = 34/434 (7%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CCS+        +LH   +K GF  +L L+N LI++Y + G++  A  +FD+M  RN+V+
Sbjct: 558 CCSEE-----ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVT 612

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHG 137
           W  L+ G+ QNG      + F  M  +   PN +   + ++A   SG  S  + G+QIHG
Sbjct: 613 WACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP-SGCKLGVQIHG 671

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           +  K+ +  + VV N +I MY  C    N+A  +FD +  ++ I+WN++I+ Y   G   
Sbjct: 672 LISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXV 731

Query: 197 KGLLLFRKMQEHGE----IPDEFTFTSTLKACGSLGSVGGG----TQIHGFLITSGFPYS 248
               LF  MQ+ G      P+E+TF S + A  S  SV  G     Q+   +  SGF   
Sbjct: 732 SAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACS--SVDFGLCVLEQMLARVEKSGFLQD 789

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  +LV  + + G   +A+ +F+ +  ++V+S + L++G  +++    A ++F ++
Sbjct: 790 L--YVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 847

Query: 309 RER-SLQVDGFVLSSMMGVFADFALVEQ----GKQIHAYAAKVPSGLD---TSVSNSIVD 360
           ++   +  D +V+  ++  F++F+++E+    G+++HA+   + +GL+    ++ N +V+
Sbjct: 848 KDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHV--IRTGLNDNKVAIGNGLVN 903

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY K G I +A  +F  M  K+ V+W  +I+G  ++  +++A   F +M      P    
Sbjct: 904 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFT 963

Query: 421 YLAVLSACSHSGLV 434
            ++ LS+C+  G +
Sbjct: 964 LISTLSSCASLGWI 977



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 206/427 (48%), Gaps = 15/427 (3%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            L  +L  C+    +  G Q+H   +K+G   D+ ++N L+ +YA+ G       VF  M 
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023

Query: 75   ERNVVSWTALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
            E + VSW +++ G L +  A     +  F +M       +  T    + A   LS  E  
Sbjct: 1024 EYDQVSWNSVI-GALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVS 1082

Query: 133  MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
             QIH + +K     +  +GN+++  Y KCG +NE  ++F  M   +  ++WN+MI+GY+ 
Sbjct: 1083 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 1142

Query: 192  AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                 K + L   M + G+  D FTF + L AC S+ ++  G ++H   I +     V  
Sbjct: 1143 NELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDV-- 1200

Query: 252  VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            V+  +LVD Y KCG +  A R F+L+  ++V SW+S+I GYA+  +  +A++LF ++   
Sbjct: 1201 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 1260

Query: 312  SLQVDGFVLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCG 366
                D   ++ ++GV    +    VE+G + H  +      L   V +   +VD+  + G
Sbjct: 1261 GQPPDH--VAPLLGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAG 1317

Query: 367  LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
             +DE  +  N MP+K NV+ W  ++    +       +G     +L ++EP       +L
Sbjct: 1318 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLL 1377

Query: 426  SACSHSG 432
            +    SG
Sbjct: 1378 ANMYASG 1384



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 206/420 (49%), Gaps = 24/420 (5%)

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E   ++H   +K GF  N  + N++I++Y + G +  A ++FD M  ++L+TW  +I+GY
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG--GTQIHGFLITSGFPY 247
              G  D+    FR M   G IP+ + F S L+AC   G  G   G QIHG +  S   Y
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLI--SKTRY 678

Query: 248 SVKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
               V+   L+  Y  C     +AR VFD I  ++ ISW+S+I  Y++  +   A +LF 
Sbjct: 679 GSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFS 738

Query: 307 QLRER----SLQVDGFVLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
            +++     S + + +   S++       DF L    +Q+ A   K     D  V +++V
Sbjct: 739 SMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVL-EQMLARVEKSGFLQDLYVGSALV 797

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             + + GL D+A  +F +M V+NVV+   ++ G  K    + A  +F +M  D V  +  
Sbjct: 798 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 856

Query: 420 AYLAVLSACSHSGLVEE----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           +Y+ +LSA S   ++EE     +E  + +        ++   + +V+   ++G + +A +
Sbjct: 857 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADA 533
           + E M  K S++ W +L+S    +   E   +  E  LR+   G  P N+ ++S + + A
Sbjct: 917 VFELMVEKDSVS-WNSLISGLDQN---ECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/690 (36%), Positives = 397/690 (57%), Gaps = 26/690 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGE--MNGACAVFDKMLE 75
           +R CS +  +  G    G L+K G F  D+ +   LIDM+ K GE     A  VFDKM E
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE 231

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            NVV+WT ++   +Q G  +  +  F  M  S  + ++FTLS+   A   L ++  G Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVL- 191
           H   ++SG   +  V  S++DMY+KC   G +++  ++FD M   S+++W A+I GY+  
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 192 AGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              + + + LF +M   G + P+ FTF+S  KACG+L     G Q+ G     G   +  
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL--ASN 407

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + +A S++  +VK   + +A+R F+ + +K+++S+++ + G  +  N  +A +L  ++ E
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R L V  F  +S++   A+   + +G+QIH+   K+    +  V N+++ MY KCG ID 
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A+ +FN M  +NV++WT +ITG+ KHG A   +  F +M+ + V+P+ V Y+A+LSACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLV E   +F+ +  D ++KP++EHY+C+VD L RAG L +A   I +MP +  + +W+
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           T L ACRVH + ELG+     +L LD + P  Y+ +SNI+A AG W E   +R+  + + 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--ELGFVYGVKYALH 608
           L K  G SW+EV  +IH FY GD  HP     HQ+  E+++ + E    G+V      LH
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHP---NAHQIYDELDRLITEIKRCGYVPDTDLVLH 764

Query: 609 DIQEESKEES----LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
            ++EE+ E      L  HSEK+A+   L+    +    + +RVFKNLRVCGDCH  +K +
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLI----STSKSRPVRVFKNLRVCGDCHNAMKYI 820

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S +     V+RD  RFH F+ G CSC DYW
Sbjct: 821 STVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 243/498 (48%), Gaps = 28/498 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML---E 75
           L+ C +      G  +H  L++     D +L N LI +Y+K G+   A  VF+ M    +
Sbjct: 69  LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW+A+M  +  NG     + +F +     + PN++  +  I+A      V  G   
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188

Query: 136 HGMCMKSG-FEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            G  MK+G FE +  VG S+IDM+ K       A ++FD M   +++TW  MI   +  G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  + +  F  M   G   D+FT +S   AC  L ++  G Q+H + I SG    V+   
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC-- 306

Query: 254 AGSLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQL- 308
             SLVD Y KC   G + + R+VFD +E  SV+SW++LI GY +  NLA EA+ LF ++ 
Sbjct: 307 --SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  ++ + F  SS      + +    GKQ+   A K     ++SV+NS++ M++K   +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           ++A   F  +  KN+V++   + G  ++   ++A  L  ++   ++      + ++LS  
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484

Query: 429 SHSGLVEESQEYFSRL------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           ++ G + + ++  S++      CN       I  YS       + G +D A  +   M  
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS-------KCGSIDTASRVFNFMEN 537

Query: 483 KPSIAIWQTLLSACRVHG 500
           +  I+ W ++++    HG
Sbjct: 538 RNVIS-WTSMITGFAKHG 554



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 232/478 (48%), Gaps = 14/478 (2%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           L+   L  G+ +  +S    M    ++P +  T S+ +K+         G  +H   ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVLAGYSDKGL 199
             E + V+ NS+I +YSK G   +A  +F+ M     + +++W+AM+A Y   G     +
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            +F +  E G +P+++ +T+ ++AC +   VG G    GFL+ +G  +     +  SL+D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH-FESDVCVGCSLID 210

Query: 260 FYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
            +VK     E A +VFD + + +V++W+ +I    Q     EA+  F  +     + D F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELF 375
            LSS+    A+   +  GKQ+H++A  + SGL   V  S+VDMY KC   G +D+  ++F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWA--IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 376 NEMPVKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGL 433
           + M   +V++WT +ITGY K+  LA EA+ LF +M+    VEP+   + +   AC +   
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
               ++   +    + +       + ++    ++ R+++A+   ES+  K  ++    L 
Sbjct: 389 PRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
             CR     +  + + EI  R  G +   +  + +  A+ GS  + E++       GL
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/689 (36%), Positives = 386/689 (56%), Gaps = 22/689 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LER 76
           +L  C     L  G+++H  +V      D  ++N L++MY KCG ++ A  VF KM   R
Sbjct: 64  ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 123

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NV+SW+ +      +GN    L  F  M    +K  +  + T + A    + V++G  IH
Sbjct: 124 NVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIH 183

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGY 194
                SGFE   +V N+++ MY +CG + EA ++FD M    + +++WN M++ YV    
Sbjct: 184 SCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDR 243

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               + L+++MQ     PD+ T+ S L AC S   VG G  +H  ++      +V  ++ 
Sbjct: 244 GKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV--IVG 298

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE---- 310
            +LV  Y KCG   EAR VFD +EQ+S+ISW+++I  Y +   +AEA  LF+Q+ E    
Sbjct: 299 NALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKN 358

Query: 311 ---RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
              + ++ D     +++   AD + +EQGK +   AA      D +V  ++V++Y KCG 
Sbjct: 359 GSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 418

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           I+EA  +F+ +  + +V  W  +I  Y + G + EA+ LF +M ++ V PD  +++++L 
Sbjct: 419 IEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 478

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           ACSH+GL ++ + YF+ +  + R   R I+H+ C+ D LGR GRL EA+  +E +PVKP 
Sbjct: 479 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 538

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
              W +LL+ACR H DL+  +EV   LLRL+      YV +SNI+A+   W+   ++RK 
Sbjct: 539 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 598

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              +G+KK  G S +E+ K +H F  GDD HP   +I + L ++  +MK E G+V   K 
Sbjct: 599 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMK-ECGYVPDTKM 657

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LH + E+ KE  L  HSE+LAI L L+   L    G  +RV KNLRVC DCH   K +S
Sbjct: 658 VLHFVDEQEKERLLFSHSERLAIALGLISTPL----GTPLRVTKNLRVCSDCHTATKLIS 713

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KI     VVRD TRFH F+ G CSC DYW
Sbjct: 714 KIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 251/489 (51%), Gaps = 31/489 (6%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MYA C     A A FD + +RN+ SWT L+  F  +G +K  L    +M    V+P+  T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
             T + + G   S+ +G++IH M + S  E +P V N++++MY KCG ++ A R+F  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 176 -AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
             +++I+W+ M   + L G   + L  FR M   G    +    + L AC S   V  G 
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGY 292
            IH  +  SGF   +  ++A +++  Y +CG + EAR+VFD +++  + V+SW+ ++  Y
Sbjct: 181 MIHSCIALSGFESEL--LVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTY 238

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
              +   +A++L+++++ R  +V    L S      D  L   G+ +H          + 
Sbjct: 239 VHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGL---GRVLHKQIVNDELEKNV 295

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-- 410
            V N++V MY KCG   EA  +F++M  +++++WT II+ Y +  L  EA  LF++ML  
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 411 -----LDDVEPDGVAYLAVLSACSHSGLVEE-----SQEYFSRLCNDKRMKPRIEHYSCI 460
                   V+PD +A++ +L+AC+    +E+      Q     L +DK +       + +
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG------TAV 409

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGD 518
           V+  G+ G ++EA+ + +++  +P + +W  +++   V+       E  ++  R  ++G 
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIA---VYAQFGQSHEALKLFWRMEMEGV 466

Query: 519 NPVNYVMMS 527
            P ++  +S
Sbjct: 467 RPDSFSFVS 475


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/721 (35%), Positives = 406/721 (56%), Gaps = 41/721 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLL--LDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
           M   SF+LVS       +L C +  ++  L  G QLHG  +++G       NN L+ MYA
Sbjct: 190 MELSSFTLVSV------ALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYA 242

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           K G ++ + A+F+  ++R++VSW  ++  F Q+      L+ F  M    V+ +  T+++
Sbjct: 243 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 302

Query: 119 NIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
            + A   L  ++ G +IH   +++     N  VG++++DMY  C ++    R+FD +  +
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 362

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
            +  WNAMI+GY   G  +K L+LF +M +  G +P+  T  S + AC    +      I
Sbjct: 363 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESI 422

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG+ +  GF       +  +L+D Y + G +  +  +FD +E +  +SW+++I GY    
Sbjct: 423 HGYAVKLGF--KEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG 480

Query: 297 NLAEAMELFRQLRER-----------------SLQVDGFVLSSMMGVFADFALVEQGKQI 339
             + A+ L  +++                     + +   L +++   A  A + +GK+I
Sbjct: 481 RYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI 540

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           HAYA +     D +V +++VDMY KCG ++ +  +FNEMP KNV+TW V+I   G HG  
Sbjct: 541 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 600

Query: 400 KEAVGLFRKMLLD-----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +EA+ LF+ M+ +     + +P+ V ++ V +ACSHSGL+ E    F R+ +D  ++P  
Sbjct: 601 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 660

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVK-PSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +HY+C+VD LGRAG+L+EA  L+ +MP +   +  W +LL ACR+H ++ELG    + LL
Sbjct: 661 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLL 720

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            L+ +   +YV++SNI++ AG WN+   +RK  R  G+KK  G SW+E   E+H F  GD
Sbjct: 721 HLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGD 780

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HP +E++H  L  + ++M++E G+V      LH++ E+ KE  L  HSEKLAI     
Sbjct: 781 VSHPQSEQLHGFLETLSEKMRKE-GYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAF--- 836

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
            G LN  PG  IRV KNLRVC DCH   K +SKI++   +VRD  RFH F+ G CSCGDY
Sbjct: 837 -GILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDY 895

Query: 694 W 694
           W
Sbjct: 896 W 896



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 242/503 (48%), Gaps = 26/503 (5%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  G Q+H A VK G+ S  + + N L++MY KCG +   C VFD++ +R+ VSW + + 
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIA 167

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTL-STNIKAS--GVLSSVENGMQIHGMCMKSG 143
              +    +  L  F  M   +++ + FTL S  +  S  GV+  +  G Q+HG  ++ G
Sbjct: 168 ALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG 227

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            +      N+++ MY+K GR++++  +F+    + +++WN MI+ +  +    + L  FR
Sbjct: 228 -DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 286

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            M   G   D  T  S L AC  L  +  G +IH +++ +       + +  +LVD Y  
Sbjct: 287 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCN 345

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSS 322
           C  +   RRVFD I  + +  W+++I GYA+     +A+ LF   ++   L  +   ++S
Sbjct: 346 CRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 405

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           +M            + IH YA K+    D  V N+++DMY + G +D +  +F+ M V++
Sbjct: 406 VMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRD 465

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-----------------VEPDGVAYLAVL 425
            V+W  +ITGY   G    A+ L  +M   +                  +P+ +  + VL
Sbjct: 466 RVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVL 525

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
             C+    + + +E  +    +  +   I   S +VD   + G L+ ++ +   MP K +
Sbjct: 526 PGCAALAAIAKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-N 583

Query: 486 IAIWQTLLSACRVHGDLELGREV 508
           +  W  L+ AC +HG  E   E+
Sbjct: 584 VITWNVLIMACGMHGKGEEALEL 606



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 218/425 (51%), Gaps = 11/425 (2%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+  SW   +    ++ + +  +S + +M  S  +P+ F     +KA   L  ++ G QI
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 136 HGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           H   +K G+  + V V N++++MY KCG I +  ++FD +  +  ++WN+ IA       
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKT 251
            ++ L  FR MQ        FT  S   AC +LG + G   G Q+HG+ +  G     KT
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG---DQKT 231

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
               +L+  Y K G + +++ +F+    + ++SW+++I  ++Q +  +EA+  FR +   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDE 370
            +++DG  ++S++   +    ++ GK+IHAY  +    ++ S V +++VDMY  C  ++ 
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACS 429
              +F+ +  + +  W  +I+GY ++GL ++A+ LF +M+ +  + P+     +V+ AC 
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H       +            + R    + ++D   R G++D ++ + +SM V+  ++ W
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQ-NALMDMYSRMGKMDISETIFDSMEVRDRVS-W 469

Query: 490 QTLLS 494
            T+++
Sbjct: 470 NTMIT 474



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 10/371 (2%)

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P++S  +W   +     +    + +  + +M   G  PD F F + LKA   L  +  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH   +  G+  S  TV A +LV+ Y KCG + +  +VFD I  +  +SW+S I    +
Sbjct: 113 QIHAAAVKFGYGSSSVTV-ANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLD 351
            E   +A+E FR ++  ++++  F L S+    ++  ++     GKQ+H Y+ +V     
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRV-GDQK 230

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           T  +N+++ MY K G +D++  LF     +++V+W  +I+ + +     EA+  FR M+L
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
           + VE DGV   +VL ACSH   ++  +E  + +  +  +       S +VD      +++
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 350

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDGDNPVNYVMMS 527
             + + + + +   I +W  ++S    +G     L L  E+ ++   L     +  VM +
Sbjct: 351 SGRRVFDHI-LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 409

Query: 528 NIHADAGSWNE 538
            +H +A S  E
Sbjct: 410 CVHCEAFSNKE 420


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/658 (36%), Positives = 367/658 (55%), Gaps = 51/658 (7%)

Query: 45  FDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FD ML  D      L+  YAK G +    A FD+M  R+ VS+   + GF  N   +  L
Sbjct: 81  FDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESL 140

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            LF +M     +P E+T+ + + AS  LS +  G QIHG  +   F  N  + N++ DMY
Sbjct: 141 ELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMY 200

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           +KCG I +A  +FD +  K+L++WN MI+GY   G  +K + L  +M+  G +PD+ T +
Sbjct: 201 AKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS 260

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
                                           T+IA      Y +CG + EARRVF   +
Sbjct: 261 --------------------------------TIIAA-----YCQCGRVDEARRVFSEFK 283

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           +K ++ W+++++GYA+     +A+ LF ++    ++ D + LSS++   A  A +  G+ 
Sbjct: 284 EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQA 343

Query: 339 IHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +H  +  + +GL+ +  VS++++DMY KCG ID+A  +FN MP +NVV+W  +I G  ++
Sbjct: 344 VHGKS--ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G  K+A+ LF  ML    +PD V ++ +LSAC H   +E+ QEYF  + N   M P ++H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDH 461

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y+C+V+ LGR GR+++A  LI++M   P   IW TLLS C   GD+         L  LD
Sbjct: 462 YACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELD 521

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
               V Y+M+SN++A  G W +   +R L +SK +KK AG SW+E+D E+H F   D TH
Sbjct: 522 PTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTH 581

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P +E I++ L  +  +++EE GF       LHD+ E+ K +S+  HSEKLA+   L++  
Sbjct: 582 PESEDIYEKLNMLIGKLQEE-GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
               P   IR+ KN+R+C DCHEF+K  S+I+    ++RD+ RFH F  G CSC D W
Sbjct: 641 NGISP---IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 255/553 (46%), Gaps = 85/553 (15%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L YG Q+HG+++   F  ++ + N L DMYAKCGE+  A  +FD + ++N+VSW  ++ G
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + +NG  + C+ L  QM  S   P++ T+ST                             
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMST----------------------------- 261

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-Q 206
                 II  Y +CGR++EA R+F     K ++ W AM+ GY   G  +  LLLF +M  
Sbjct: 262 ------IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLL 315

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           EH E PD +T +S + +C  L S+  G  +HG  I +G   ++  +++ +L+D Y KCG 
Sbjct: 316 EHIE-PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL--LVSSALIDMYSKCGF 372

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           + +AR VF+L+  ++V+SW+++I+G AQ  +  +A+ELF  + ++  + D      ++  
Sbjct: 373 IDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                 +EQG++                 +SI + +     +D                +
Sbjct: 433 CLHCNWIEQGQEYF---------------DSITNQHGMTPTLDH---------------Y 462

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             ++   G+ G  ++AV L + M  D   PD + +  +LS CS  G +  ++     L  
Sbjct: 463 ACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDIVNAEVAARHLFE 519

Query: 447 -DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI-W-------QTLLSACR 497
            D  +       S +  S+GR   +   +NL++S  VK      W           S  R
Sbjct: 520 LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDR 579

Query: 498 VHGDLELGREVGEIL---LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL-KK 553
            H + E   E   +L   L+ +G  P   +++ ++  D    + C    KLA + GL KK
Sbjct: 580 THPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKK 639

Query: 554 VAGRSWVEVDKEI 566
             G S + + K I
Sbjct: 640 PNGISPIRIIKNI 652



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 18/183 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  +  C+K   L +G  +HG  +  G + +L++++ LIDMY+KCG ++ A +VF+ M 
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMP 384

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVVSW A++ G  QNG+ K  L LF  M     KP+  T    + A    + +E G +
Sbjct: 385 TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQE 444

Query: 135 I-------HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA-KSLITWNA 184
                   HGM         P + +   ++++  + GRI +A  +   M      + W+ 
Sbjct: 445 YFDSITNQHGM--------TPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496

Query: 185 MIA 187
           +++
Sbjct: 497 LLS 499


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/669 (35%), Positives = 396/669 (59%), Gaps = 8/669 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L D  + +H  + K+G   D  +   LID Y+ CG ++ A  VFD +  +++VSWT ++ 
Sbjct: 119 LADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            + +N   +  L LFCQM     +PN FT+S  +K+   L + + G  +HG  +K  ++ 
Sbjct: 179 CYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR 238

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  VG +++++Y+K G I EA + F+ MP   LI W+ MI+ Y  +  S + L LF +M+
Sbjct: 239 DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMR 298

Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +   + P+ FTF S L+AC SL  +  G QIH  ++  G   +V   ++ +L+D Y KCG
Sbjct: 299 QSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNV--FVSNALMDVYAKCG 356

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +  + ++F    +K+ ++W+++I+GY Q  +  +A+ LF  +    +Q      SS++ 
Sbjct: 357 EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLR 416

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A    +E G+QIH+   K     D+ V+NS++DMY KCG ID+A   F++M  ++ V+
Sbjct: 417 ASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS 476

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY  HGL  EA+ LF  M   + +P+ + ++ VLSACS++GL+++ + +F  + 
Sbjct: 477 WNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSML 536

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  ++P IEHY+C+V  LGR+G+ DEA  LI  +P +PS+ +W+ LL AC +H +L+LG
Sbjct: 537 QDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLG 596

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +   + +L ++  +   +V++SN++A A  W+    +RK  + K +KK  G SWVE    
Sbjct: 597 KVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGV 656

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H+F  GD +HP  + I  +L  + K+ ++  G+V      L D++++ KE  L +HSE+
Sbjct: 657 VHYFTVGDTSHPNIKLIFAMLEWLYKKTRDA-GYVPDCSVVLLDVEDDEKERLLWMHSER 715

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   L++       G  IR+ KNLR+C DCH  IK +SKI++   V+RD  RFH F  
Sbjct: 716 LALAFGLIQ----IPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQ 771

Query: 686 GVCSCGDYW 694
           GVCSCGDYW
Sbjct: 772 GVCSCGDYW 780



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 254/493 (51%), Gaps = 9/493 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +    A+ L+   +N   + G  LH  ++K G S DL   N L++ Y   G +  A  +F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M   N VS+  L  GF ++   +    L  ++     + N+F  +T +K    +   +
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
             + +H    K G + +  VG ++ID YS CG ++ A ++FD +  K +++W  M+A Y 
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                +  LLLF +M+  G  P+ FT ++ LK+C  L +   G  +HG  +   +   + 
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             IA  L++ Y K G + EA++ F+ + +  +I WS +I  YAQ +   EA+ELF ++R+
Sbjct: 242 VGIA--LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 311 RSLQV-DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGL 367
            S+ V + F  +S++   A   L+  G QIH+   KV  GLD++  VSN+++D+Y KCG 
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV--GLDSNVFVSNALMDVYAKCGE 357

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I+ + +LF     KN V W  II GY + G  ++A+ LF  ML  D++P  V Y +VL A
Sbjct: 358 IENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA 417

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            +    +E  ++  S        K  +   S ++D   + GR+D+A+   + M  +  ++
Sbjct: 418 SASLVALEPGRQIHSLTIKTMYNKDSVVANS-LIDMYAKCGRIDDARLTFDKMDKQDEVS 476

Query: 488 IWQTLLSACRVHG 500
            W  L+    +HG
Sbjct: 477 -WNALICGYSIHG 488



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 209/380 (55%), Gaps = 7/380 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L+ C+       G  +HG  +K+ +  DL +   L+++Y K GE+  A   F++M 
Sbjct: 208 ISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP 267

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGM 133
           + +++ W+ ++  + Q+  +K  L LFC+M  SS V PN FT ++ ++A   L  +  G 
Sbjct: 268 KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           QIH   +K G + N  V N+++D+Y+KCG I  + ++F     K+ + WN +I GYV  G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             +K L LF  M      P E T++S L+A  SL ++  G QIH   I +   Y+  +V+
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT--MYNKDSVV 445

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           A SL+D Y KCG + +AR  FD ++++  +SW++LI GY+      EA+ LF  +++ + 
Sbjct: 446 ANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNS 505

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEA 371
           + +      ++   ++  L+++G+  H  +     G++  + +    ++L  + G  DEA
Sbjct: 506 KPNKLTFVGVLSACSNAGLLDKGRA-HFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEA 564

Query: 372 TELFNEMPVK-NVVTWTVII 390
            +L  E+P + +V+ W  ++
Sbjct: 565 VKLIGEIPFQPSVMVWRALL 584



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 138/231 (59%)

Query: 3   RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           R S  +V      A  L+ C+  +LL+ G Q+H  ++K+G   ++ ++N L+D+YAKCGE
Sbjct: 298 RQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGE 357

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           +  +  +F    E+N V+W  ++ G++Q G+ +  L+LF  M    ++P E T S+ ++A
Sbjct: 358 IENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA 417

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S  L ++E G QIH + +K+ +  + VV NS+IDMY+KCGRI++A   FD M  +  ++W
Sbjct: 418 SASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSW 477

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           NA+I GY + G   + L LF  MQ+    P++ TF   L AC + G +  G
Sbjct: 478 NALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG 528


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/661 (35%), Positives = 378/661 (57%), Gaps = 7/661 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H    K+G   +  +   LID Y+ CG +  A  VFD ++ ++ V+WTA++  + +N  
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDI 229

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  L+ F +M  +  KPN F L++ +KA+  LSS   G  IHG  +K+ ++  P VG +
Sbjct: 230 PEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGA 289

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY+KCG I +A  +F+++P   +I W+ +I+ Y  +  +++   +F +M     +P+
Sbjct: 290 LLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPN 349

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           EF+ +  L+AC ++  +  G QIH   I  G  Y  +  +  +L+D Y KC  +  +  +
Sbjct: 350 EFSLSGVLQACANIAFLELGEQIHNLAIKLG--YESELFVGNALMDMYAKCRNMENSLEI 407

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F  ++  + +SW+++I+GY Q     +A+ +F ++R   +       SS++   A+ + +
Sbjct: 408 FSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSI 467

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           +   QIH+   K     DT V NS++D Y KCG I +A ++F  +   +VV+W  II+ Y
Sbjct: 468 KHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAY 527

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG A  A+ LF +M   D++ + V ++++LS C  +GLV +    F+ +  D R+KP 
Sbjct: 528 ALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPS 587

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+CIV  LGRAGRL +A   I  +P  PS  +W+ LLS+C VH ++ LGR   E +L
Sbjct: 588 MEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVL 647

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            ++  +   YV++SN++A AG  +E    RK  R+ G+KK AG SWVE+  E+H F  G 
Sbjct: 648 DIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGS 707

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
             HP    I+ +L  +  +   E G+V  +   LHD+ EE K   L VHSE+LA+   L 
Sbjct: 708 ADHPDMRIINAMLEWLNLKASRE-GYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLS 766

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
                  PG  IR+ KNLR C DCH   K +SKI++   +VRD  RFH FE G+CSCGDY
Sbjct: 767 M----TPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDY 822

Query: 694 W 694
           W
Sbjct: 823 W 823



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 257/511 (50%), Gaps = 7/511 (1%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +H  +V+ G     D    N L++ YAK G +  A  +FD M ERN VS+  LM G+
Sbjct: 64  GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
              G  +  L LF ++     + N F L+T +K    + +      IH    K G + N 
Sbjct: 124 ALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG ++ID YS CG +  A  +FD +  K  +TW AM++ Y      +  L  F KM+  
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMT 243

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ F  TS LKA   L S   G  IHG  + +   Y  +  + G+L+D Y KCG + 
Sbjct: 244 GFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT--LYDTEPHVGGALLDMYAKCGDIE 301

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A  +F++I    VI WS LI  YAQ     +A E+F ++    +  + F LS ++   A
Sbjct: 302 DAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACA 361

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + A +E G+QIH  A K+    +  V N+++DMY KC  ++ + E+F+ +   N V+W  
Sbjct: 362 NIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNT 421

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           II GY + G A++A+ +F +M    +    V + +VL AC+++  ++ + +  S +    
Sbjct: 422 IIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKST 481

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                I   S ++D+  + G + +A  + ES+ V+  +  W +++SA  +HG      E+
Sbjct: 482 FNNDTIVCNS-LIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGRATNALEL 539

Query: 509 GEILLRLD-GDNPVNYVMMSNIHADAGSWNE 538
            + + + D   N V +V + ++    G  N+
Sbjct: 540 FDRMNKSDIKANDVTFVSLLSVCGSTGLVNQ 570



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 224/420 (53%), Gaps = 12/420 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C S  LL   G  +HG  VK  +  +  +   L+DMYAKCG++  A A+F+ +   +V+ 
Sbjct: 261 CLSSALL---GKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVIL 317

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W+ L+  + Q+   +    +F +M  S V PNEF+LS  ++A   ++ +E G QIH + +
Sbjct: 318 WSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAI 377

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G+E    VGN+++DMY+KC  +  +  +F  +   + ++WN +I GY  +G+++  L 
Sbjct: 378 KLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALS 437

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F +M+    +  + TF+S L+AC +  S+    QIH  +  S F  +  T++  SL+D 
Sbjct: 438 VFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF--NNDTIVCNSLIDT 495

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG + +A +VF+ I +  V+SW+S+I  YA       A+ELF ++ +  ++ +    
Sbjct: 496 YAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTF 555

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++ V     LV QG  +   +  +   +  S+ +   IV +  + G + +A +   ++
Sbjct: 556 VSLLSVCGSTGLVNQGLWLFN-SMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDI 614

Query: 379 P-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEE 436
           P   + + W  +++    H     A+G +    + D+EP D   Y+ + +  + +G+++E
Sbjct: 615 PSTPSPMVWRALLSSCVVH--KNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDE 672



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 190/383 (49%), Gaps = 37/383 (9%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V     L+  L+ C+    L+ G Q+H   +K+G+  +L + N L+DMYAKC  M  + 
Sbjct: 346 VVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSL 405

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F  + + N VSW  ++ G+ Q+G A+  LS+F +M ++ +   + T S+ ++A    S
Sbjct: 406 EIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTS 465

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+++ +QIH +  KS F  + +V NS+ID Y+KCG I +A ++F+ +    +++WN++I+
Sbjct: 466 SIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIIS 525

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            Y L G +   L LF +M +     ++ TF S L  CGS G V  G  +   ++     +
Sbjct: 526 AYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMD---H 582

Query: 248 SVKTVIA--GSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMEL 304
            +K  +     +V    + G L +A +   D+    S + W +L+      +N+A    L
Sbjct: 583 RIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVA----L 638

Query: 305 FRQLRERSLQVD-----GFVLSSMM----GVFADFAL------------------VEQGK 337
            R   E+ L ++      +VL S M    G+  + AL                  VE   
Sbjct: 639 GRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKG 698

Query: 338 QIHAYAAKVPSGLDTSVSNSIVD 360
           ++HA++       D  + N++++
Sbjct: 699 EVHAFSVGSADHPDMRIINAMLE 721



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 140/285 (49%), Gaps = 8/285 (2%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +     L+ C + G    G  +H  ++  G    + T  A  L++FY K G L  ARR
Sbjct: 44  DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++ +S+ +L+ GYA      EA+ELFR+L+    +V+ FVL++++ V      
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDA 163

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
                 IHA A K+    +  V  +++D Y  CG +  A  +F+ +  K+ VTWT +++ 
Sbjct: 164 PGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSC 223

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA--CSHSGLVEESQEYFSRLCNDKRM 450
           Y ++ + + A+  F KM +   +P+     + L A  C  S L+ +        C+ K +
Sbjct: 224 YSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHG----CSVKTL 279

Query: 451 KPRIEHY-SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
                H    ++D   + G +++A  + E +P    + +W  L+S
Sbjct: 280 YDTEPHVGGALLDMYAKCGDIEDAHAIFEMIP-HDDVILWSFLIS 323


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/680 (36%), Positives = 384/680 (56%), Gaps = 18/680 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           C    L    G  + G  +K GF   D+ +   LIDM+A+ G++  A  VF+ ++ER VV
Sbjct: 156 CFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVV 215

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
            WT ++  ++Q G A   + LF  M     +P+ +T+S+ + A     S   G Q+H + 
Sbjct: 216 VWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLV 275

Query: 140 MKSGFEWNPVVGNSIIDMYSKCG---RINEAARMFDVMPAKSLITWNAMIAGYV-LAGYS 195
           ++ G   +  V   ++DMY+K      +  A ++F  MP  ++++W A+I+GYV   G  
Sbjct: 276 LRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQE 335

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +  + L  +M      P+  T++S LKAC +L     G QIH  ++ +        V+  
Sbjct: 336 NNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSI--GNVNVVGN 393

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y + GC+ EAR+ FD + +++++S SS I G     N + +     Q+    + V
Sbjct: 394 ALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI-GETGRSNASWS----SQIESMDVGV 448

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
             F  +S++   A   L  +G+Q+HA + K     D  +SNS+V MY +CG +D+A   F
Sbjct: 449 STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAF 508

Query: 376 NEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           +EM    NV++WT II+   KHG A+ A+ LF  M+L  V+P+ V Y+AVLSACSH GLV
Sbjct: 509 DEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLV 568

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E +EYF  +  D R+ PR+EHY+C+VD L R+G + EA   I  MP K    +W+TLL 
Sbjct: 569 KEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLG 628

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR + ++E+G      ++ L+  +P  YV++SN++A  G W+E  R+R L R + L K 
Sbjct: 629 ACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKE 688

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+ V   IH F  GD +HP  ++I+  L  + + +K ++G+V      LHD+ ++ 
Sbjct: 689 TGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIK-DIGYVPDTSIVLHDMSDKL 747

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           KE+ L  HSEK+A+   L+       P K IR+FKNLRVC DCH  IK +SK      ++
Sbjct: 748 KEQCLLQHSEKIAVAFGLI----TTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIIL 803

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD+ RFHR + G CSCG+YW
Sbjct: 804 RDSNRFHRMKDGKCSCGEYW 823



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 238/472 (50%), Gaps = 29/472 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALMCGFLQNGNAKACLSLFCQM 104
           D ++ N L+ MY+KCG +  A  VFD M   R++VSWTA+     +NG  +  L L  +M
Sbjct: 78  DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137

Query: 105 GSSSVKPNEFTLSTNIKA--SGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKC 161
             S ++PN FTL     A   G L     G  + G  +K+GF    V VG ++IDM+++ 
Sbjct: 138 LESGLRPNAFTLCAAAHACFPGELFRSSGG-TVLGFAIKTGFWGTDVSVGCALIDMFARN 196

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G +  A ++F+ +  ++++ W  MI  YV  G + K + LF  M E G  PD +T +S +
Sbjct: 197 GDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMV 256

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC---GCLVEARRVFDLIE 278
            AC   GS G G Q+H  ++  G      T ++  LVD Y K      +  AR+VF  + 
Sbjct: 257 SACAEQGSAGLGQQLHSLVLRLGL--VSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314

Query: 279 QKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
             +V+SW++LI GY Q   +EN   A+EL  ++   S++ +    SS++   A+ +  + 
Sbjct: 315 THNVMSWTALISGYVQCGGQEN--NAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDS 372

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+QIHA   K   G    V N++V MY + G ++EA + F+++  +N+++ +  I   G+
Sbjct: 373 GRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGR 432

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
              +  +     ++   DV      + ++LSA +  GL  + Q+  +       +K   E
Sbjct: 433 SNASWSS-----QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHAL-----SIKTGFE 482

Query: 456 HYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
               I +SL     R G LD+A    + M    ++  W +++SA   HG  E
Sbjct: 483 SDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 118/218 (54%), Gaps = 6/218 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+     D G Q+H  ++K       ++ N L+ MYA+ G M  A   FD++ ERN+
Sbjct: 361 LKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNL 420

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +S ++      + G + A  S   Q+ S  V  + FT ++ + A+  +     G Q+H +
Sbjct: 421 LSTSS---DIGETGRSNASWS--SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHAL 475

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDK 197
            +K+GFE +  + NS++ MYS+CG +++A R FD M    ++I+W ++I+     G++++
Sbjct: 476 SIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAER 535

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            L LF  M   G  P++ T+ + L AC  +G V  G +
Sbjct: 536 ALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKE 573


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/700 (34%), Positives = 397/700 (56%), Gaps = 17/700 (2%)

Query: 5    SFSLVSERQRLADSLRCCSKNLLLD---------YGVQLHGALVKMGFSFDLMLNNDLID 55
            SF + S  +R  D +   + + LL          +G  +HG +VKMGF   + + N L+ 
Sbjct: 335  SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 394

Query: 56   MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
            MYA  G    A  VF +M  ++++SW +LM  F+ +G +   L L C M SS    N  T
Sbjct: 395  MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 454

Query: 116  LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
             ++ + A       E G  +HG+ + SG  +N ++GN+++ MY K G ++E+ R+   MP
Sbjct: 455  FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514

Query: 176  AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGT 234
             + ++ WNA+I GY      DK L  F+ M+  G   +  T  S L AC   G +   G 
Sbjct: 515  RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 574

Query: 235  QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
             +H +++++GF       +  SL+  Y KCG L  ++ +F+ ++ +++I+W++++   A 
Sbjct: 575  PLHAYIVSAGFESDEH--VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 632

Query: 295  EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              +  E ++L  ++R   + +D F  S  +   A  A++E+G+Q+H  A K+    D+ +
Sbjct: 633  HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 692

Query: 355  SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             N+  DMY KCG I E  ++      +++ +W ++I+  G+HG  +E    F +ML   +
Sbjct: 693  FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 752

Query: 415  EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            +P  V ++++L+ACSH GLV++   Y+  +  D  ++P IEH  C++D LGR+GRL EA+
Sbjct: 753  KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 812

Query: 475  NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
              I  MP+KP+  +W++LL++C++HG+L+ GR+  E L +L+ ++   YV+ SN+ A  G
Sbjct: 813  TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 872

Query: 535  SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
             W + E +RK    K +KK    SWV++  ++  F  GD THP T +I+  L +++K +K
Sbjct: 873  RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 932

Query: 595  EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
            E  G+V     AL D  EE KE +L  HSE+LA+  AL    ++   G  +R+FKNLR+C
Sbjct: 933  ES-GYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL----MSTPEGSTVRIFKNLRIC 987

Query: 655  GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             DCH   K +S+++    V+RD  RFH FE G+CSC DYW
Sbjct: 988  SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 242/478 (50%), Gaps = 13/478 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+ G +VK G    L + N LI M    G ++ A  +FD+M ER+ +SW ++   + Q
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG+ +    +F  M     + N  T+ST +   G +   + G  IHG+ +K GF+    V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MY+  GR  EA  +F  MP K LI+WN+++A +V  G S   L L   M   G+
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             +  TFTS L AC +      G  +HG ++ SG  Y+   +I  +LV  Y K G + E+
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN--QIIGNALVSMYGKIGEMSES 506

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF-VLSSMMGVFAD 329
           RRV   + ++ V++W++LI GYA++E+  +A+  F+ +R   +  +   V+S +      
Sbjct: 507 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 566

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
             L+E+GK +HAY        D  V NS++ MY KCG +  + +LFN +  +N++TW  +
Sbjct: 567 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 626

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           +     HG  +E + L  KM    V  D  ++   LSA +   ++EE Q+      +   
Sbjct: 627 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLA 681

Query: 450 MKPRIEHYSCI----VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +K   EH S I     D   + G + E   ++    V  S+  W  L+SA   HG  E
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 738



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 232/503 (46%), Gaps = 47/503 (9%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     +   GVQ+HG + K G   D+ ++  ++ +Y   G ++ +  VF++M +RNVVS
Sbjct: 183 CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 242

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM G+   G  +  + ++                              G QI G  +
Sbjct: 243 WTSLMVGYSDKGEPEEVIDIY-------------------------KDESLGRQIIGQVV 277

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG E    V NS+I M    G ++ A  +FD M  +  I+WN++ A Y   G+ ++   
Sbjct: 278 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 337

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F  M+   +  +  T ++ L   G +     G  IHG ++  GF   V   +  +L+  
Sbjct: 338 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV--CVCNTLLRM 395

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y   G  VEA  VF  +  K +ISW+SL+  +  +    +A+ L   +      V+    
Sbjct: 396 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +S +         E+G+ +H     V SGL  +  + N++V MY K G + E+  +  +M
Sbjct: 456 TSALAACFTPDFFEKGRILHGLV--VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 513

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG-LVEES 437
           P ++VV W  +I GY +     +A+  F+ M ++ V  + +  ++VLSAC   G L+E  
Sbjct: 514 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 573

Query: 438 QEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +   + +      +D+ +K      + ++    + G L  +++L   +  + +I  W  +
Sbjct: 574 KPLHAYIVSAGFESDEHVK------NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAM 626

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           L+A   HG    G EV +++ ++
Sbjct: 627 LAANAHHGH---GEEVLKLVSKM 646



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 221/474 (46%), Gaps = 50/474 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H   VK      ++  N LI+MY K G +  A  +FD M  RN VSW  +M G ++
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV-ENGMQIHGMCMKSGFEWNPV 149
            G     +  F +M    +KP+ F +++ + A G   S+   G+Q+HG   KSG   +  
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V  +I+ +Y   G ++ + ++F+ MP +++++W ++     + GYSDKG        E  
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSL-----MVGYSDKG--------EPE 257

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E+ D +   S             G QI G ++ SG     K  +  SL+      G +  
Sbjct: 258 EVIDIYKDESL------------GRQIIGQVVKSGL--ESKLAVENSLISMLGSMGNVDY 303

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  +FD + ++  ISW+S+   YAQ  ++ E+  +F  +R    +V+   +S+++ V   
Sbjct: 304 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 363

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               + G+ IH    K+       V N+++ MY   G   EA  +F +MP K++++W  +
Sbjct: 364 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS----------GLVEESQE 439
           +  +   G + +A+GL   M+      + V + + L+AC             GLV  S  
Sbjct: 424 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 483

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +++++  +            +V   G+ G + E++ ++  MP +  +A W  L+
Sbjct: 484 FYNQIIGN-----------ALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 525



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 248/546 (45%), Gaps = 88/546 (16%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  +H +C+K     + +  N++I+MY+K GR+  A  +FD+MP ++ ++WN M++G V
Sbjct: 90  TGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSV 249
             G   +G+  FRKM + G  P  F   S + ACG  GS+   G Q+HGF+  SG    V
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              ++ +++  Y   G +  +R+VF+ +  ++V+SW+SL++GY+ +    E ++++   +
Sbjct: 210 --YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY---K 264

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGL 367
           + SL                      G+QI     K  SGL++  +V NS++ M    G 
Sbjct: 265 DESL----------------------GRQIIGQVVK--SGLESKLAVENSLISMLGSMGN 300

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +D A  +F++M  ++ ++W  I   Y ++G  +E+  +F  M     E +      +LS 
Sbjct: 301 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 360

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR----AGRLDEAKNLIESMPVK 483
             H        + + R  +   +K   +   C+ ++L R    AGR  EA  + + MP K
Sbjct: 361 LGHV-----DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 415

Query: 484 PSIAIWQTLLSACRVHGDLELGRE---VGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
             I+ W +L+++      +  GR    +G +   +     VNYV  ++  A   + +  E
Sbjct: 416 DLIS-WNSLMASF-----VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 469

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           + R L    GL  V+G            FY         + I   L+ M  ++ E     
Sbjct: 470 KGRIL---HGLVVVSG-----------LFY--------NQIIGNALVSMYGKIGE----- 502

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG-GLNEQPGKVIRVFKNLRVCGDCHE 659
                       ES+   L++    +    AL+ G   +E P K +  F+ +RV G    
Sbjct: 503 ----------MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552

Query: 660 FIKGLS 665
           +I  +S
Sbjct: 553 YITVVS 558



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           F+   +   G+ +HA   K    L    +N++++MY K G +  A  LF+ MPV+N V+W
Sbjct: 82  FSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSW 141

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +++G  + GL  E +  FRKM    ++P      ++++AC  SG +            
Sbjct: 142 NTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 201

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL----------SAC 496
              +   +   + I+   G  G +  ++ + E MP + ++  W +L+             
Sbjct: 202 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR-NVVSWTSLMVGYSDKGEPEEVI 260

Query: 497 RVHGDLELGREV 508
            ++ D  LGR++
Sbjct: 261 DIYKDESLGRQI 272


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/700 (34%), Positives = 397/700 (56%), Gaps = 17/700 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLD---------YGVQLHGALVKMGFSFDLMLNNDLID 55
           SF + S  +R  D +   + + LL          +G  +HG +VKMGF   + + N L+ 
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MYA  G    A  VF +M  ++++SW +LM  F+ +G +   L L C M SS    N  T
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            ++ + A       E G  +HG+ + SG  +N ++GN+++ MY K G ++E+ R+   MP
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGT 234
            + ++ WNA+I GY      DK L  F+ M+  G   +  T  S L AC   G +   G 
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
            +H +++++GF       +  SL+  Y KCG L  ++ +F+ ++ +++I+W++++   A 
Sbjct: 485 PLHAYIVSAGFESDEH--VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
             +  E ++L  ++R   + +D F  S  +   A  A++E+G+Q+H  A K+    D+ +
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+  DMY KCG I E  ++      +++ +W ++I+  G+HG  +E    F +ML   +
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P  V ++++L+ACSH GLV++   Y+  +  D  ++P IEH  C++D LGR+GRL EA+
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             I  MP+KP+  +W++LL++C++HG+L+ GR+  E L +L+ ++   YV+ SN+ A  G
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W + E +RK    K +KK    SWV++  ++  F  GD THP T +I+  L +++K +K
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 842

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           E  G+V     AL D  EE KE +L  HSE+LA+  AL    ++   G  +R+FKNLR+C
Sbjct: 843 ES-GYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL----MSTPEGSTVRIFKNLRIC 897

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +S+++    V+RD  RFH FE G+CSC DYW
Sbjct: 898 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 248/493 (50%), Gaps = 15/493 (3%)

Query: 18  SLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           SL   S  LL D   G Q+ G +VK G    L + N LI M    G ++ A  +FD+M E
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+ +SW ++   + QNG+ +    +F  M     + N  T+ST +   G +   + G  I
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 283

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +K GF+    V N+++ MY+  GR  EA  +F  MP K LI+WN+++A +V  G S
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 343

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              L L   M   G+  +  TFTS L AC +      G  +HG ++ SG  Y+   +I  
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN--QIIGN 401

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y K G + E+RRV   + ++ V++W++LI GYA++E+  +A+  F+ +R   +  
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461

Query: 316 DGF-VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
           +   V+S +        L+E+GK +HAY        D  V NS++ MY KCG +  + +L
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN +  +N++TW  ++     HG  +E + L  KM    V  D  ++   LSA +   ++
Sbjct: 522 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 581

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           EE Q+      +   +K   EH S I     D   + G + E   ++    V  S+  W 
Sbjct: 582 EEGQQ-----LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWN 635

Query: 491 TLLSACRVHGDLE 503
            L+SA   HG  E
Sbjct: 636 ILISALGRHGYFE 648



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 244/503 (48%), Gaps = 22/503 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     +   GVQ+HG + K G   D+ ++  ++ +Y   G ++ +  VF++M +RNVVS
Sbjct: 68  CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 127

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM G+   G  +  + ++  M    V  NE ++S  I + G+L     G QI G  +
Sbjct: 128 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG E    V NS+I M    G ++ A  +FD M  +  I+WN++ A Y   G+ ++   
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F  M+   +  +  T ++ L   G +     G  IHG ++  GF   V   +  +L+  
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV--CVCNTLLRM 305

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y   G  VEA  VF  +  K +ISW+SL+  +  +    +A+ L   +      V+    
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +S +         E+G+ +H     V SGL  +  + N++V MY K G + E+  +  +M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLV--VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG-LVEES 437
           P ++VV W  +I GY +     +A+  F+ M ++ V  + +  ++VLSAC   G L+E  
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483

Query: 438 QEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +   + +      +D+ +K      + ++    + G L  +++L   +  + +I  W  +
Sbjct: 484 KPLHAYIVSAGFESDEHVK------NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAM 536

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           L+A   HG    G EV +++ ++
Sbjct: 537 LAANAHHGH---GEEVLKLVSKM 556



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 216/439 (49%), Gaps = 5/439 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY K G +  A  +FD M  RN VSW  +M G ++ G     +  F +M    +KP+ F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 116 LSTNIKASGVLSSV-ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           +++ + A G   S+   G+Q+HG   KSG   +  V  +I+ +Y   G ++ + ++F+ M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P +++++W +++ GY   G  ++ + +++ M+  G   +E + +  + +CG L     G 
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QI G ++ SG     K  +  SL+      G +  A  +FD + ++  ISW+S+   YAQ
Sbjct: 181 QIIGQVVKSGL--ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
             ++ E+  +F  +R    +V+   +S+++ V       + G+ IH    K+       V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+++ MY   G   EA  +F +MP K++++W  ++  +   G + +A+GL   M+    
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
             + V + + L+AC      E+ +     +        +I   + +V   G+ G + E++
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESR 417

Query: 475 NLIESMPVKPSIAIWQTLL 493
            ++  MP +  +A W  L+
Sbjct: 418 RVLLQMPRRDVVA-WNALI 435



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 243/523 (46%), Gaps = 69/523 (13%)

Query: 157 MYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFT 216
           MY+K GR+  A  +FD+MP ++ ++WN M++G V  G   +G+  FRKM + G  P  F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 217 FTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
             S + ACG  GS+   G Q+HGF+  SG    V   ++ +++  Y   G +  +R+VF+
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV--YVSTAILHLYGVYGLVSCSRKVFE 118

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS---SMMGVFADFAL 332
            +  ++V+SW+SL++GY+ +    E +++++ +R   +  +   +S   S  G+  D +L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178

Query: 333 VEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
              G+QI     K  SGL++  +V NS++ M    G +D A  +F++M  ++ ++W  I 
Sbjct: 179 ---GRQIIGQVVK--SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G  +E+  +F  M     E +      +LS   H        + + R  +   +
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV-----DHQKWGRGIHGLVV 288

Query: 451 KPRIEHYSCIVDSLGR----AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           K   +   C+ ++L R    AGR  EA  + + MP K  I+ W +L+++      +  GR
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMASF-----VNDGR 342

Query: 507 E---VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
               +G +   +     VNYV  ++  A   + +  E+ R L    GL  V+G       
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL---HGLVVVSG------- 392

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
                FY         + I   L+ M  ++ E                 ES+   L++  
Sbjct: 393 ----LFY--------NQIIGNALVSMYGKIGE---------------MSESRRVLLQMPR 425

Query: 624 EKLAIGLALVRG-GLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
             +    AL+ G   +E P K +  F+ +RV G    +I  +S
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/706 (37%), Positives = 387/706 (54%), Gaps = 43/706 (6%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K      G+Q+HG++VKMG   D+ + N LI  YA+CG M+    VF+ M ERNVVSW
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+L+CG+ +    K  +SLF +M  + ++P+  T+   I A   L  ++ G ++     +
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE 260

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G + N V+ N+++DMY KCG I+ A R+FD    ++L+ +N +++ Y   G + + L +
Sbjct: 261 LGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAI 320

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP--YSVKTVIAGSLVD 259
             +M + G  PD  T  S + A   L  +  G   HG++I +G     S+  VI    +D
Sbjct: 321 LDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVI----ID 376

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQ 314
            Y+KCG    A RVFDL+  K+V+SW+SL  G+ +  ++  A E+F Q+ ER     +  
Sbjct: 377 MYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTM 436

Query: 315 VDGFVLSSMM-------------GVFAD-------------FALVEQGKQIHAYAAKVPS 348
           + G V  S+              G+ AD                 E  K +H Y  K   
Sbjct: 437 ISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI 496

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             D  ++ ++VDM+ +CG    A ++FN+M  ++V  WT  I      G  + A GLF +
Sbjct: 497 PCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQ 556

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           ML+  V+PD V ++ VL+ACSH G VE+    FS L  D  + P+IEHY C+VD LGRAG
Sbjct: 557 MLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFS-LMEDHGISPQIEHYGCMVDLLGRAG 615

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            L EA +LI+SMP++P+  +W +LL+ACRVH ++E+     E +  L       +V++SN
Sbjct: 616 LLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSN 675

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+A AG W +  R+R   R KG++KV G S V+V+  IH F  GD++HP    I  +L E
Sbjct: 676 IYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQE 735

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           M  R  +  G +  +   L D+ E+ KE  L  HSEKLAI   L+  G    P   IRV 
Sbjct: 736 MNCRFSDA-GHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATG-RSMP---IRVV 790

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLR+C DCH F K  S I     +VRD  RFH F  G+CSC DYW
Sbjct: 791 KNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 259/574 (45%), Gaps = 85/574 (14%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---MNGACAVFD 71
           L +SLRCC     L+   QLH  + K G          L++  A+      ++ A   F+
Sbjct: 28  LNESLRCCKT---LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE 84

Query: 72  KMLERNVVSWTALMC------GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
            + + +V S  AL        G+   G  +  + L+ +M    V PN +T    +     
Sbjct: 85  -LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTK 143

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           +++   G+Q+HG  +K G E +  + N +I  Y++CG ++   ++F+ M  +++++W ++
Sbjct: 144 IAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSL 203

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I GY       + + LF +M E G  P   T    + AC  L  +  G ++  ++   G 
Sbjct: 204 ICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGL 263

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              +  V+  +LVD Y+KCG +  A+R+FD    ++++ +++++  YA++    EA+ + 
Sbjct: 264 --KLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAIL 321

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYL 363
            ++ ++  + D   + S +   A    +  GK  H Y  +  +GL+   S+ N I+DMY+
Sbjct: 322 DEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIR--NGLEGWDSIGNVIIDMYM 379

Query: 364 KCGL-------------------------------IDEATELFNEMPVKNVVTWTVIITG 392
           KCG                                ++ A E+FN++P +N V W  +I+G
Sbjct: 380 KCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISG 439

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ-------------- 438
             +  L ++A+ LFR+M  + ++ D V  + + SAC + G  E ++              
Sbjct: 440 LVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD 499

Query: 439 --------EYFSRLCND--------KRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESM- 480
                   + F+R C D         +M  R +  ++  + ++   G  + A  L   M 
Sbjct: 500 MRLNTALVDMFAR-CGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQML 558

Query: 481 --PVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
              VKP + ++  +L+AC   G +E G  +  ++
Sbjct: 559 IQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM 592



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 146/342 (42%), Gaps = 40/342 (11%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  +  ++   ++ + L YG   HG +++ G      + N +IDMY KCG+   AC VF
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKA-------------------------------CLS 99
           D M  + VVSW +L  GF++NG+ ++                                + 
Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           LF +M    +K +  T+     A G L + E    +H    K+G   +  +  +++DM++
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           +CG    A ++F+ M  + +  W A I    + G  +    LF +M   G  PD   F  
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 571

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE- 278
            L AC   G V  G  I   +   G    ++    G +VD   + G L EA   FDLI+ 
Sbjct: 572 VLTACSHGGQVEQGLHIFSLMEDHGISPQIEHY--GCMVDLLGRAGLLREA---FDLIKS 626

Query: 279 ---QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
              + + + W SL+      +N+  A     ++ E + Q  G
Sbjct: 627 MPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAG 668


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/671 (36%), Positives = 393/671 (58%), Gaps = 17/671 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD G ++H   VK G    + + N L++MYAKCG +  A +VF+ M  R++VSW  LM G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              N      L LF +  ++  K  + T +T IK    L  +    Q+H   +K GF   
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             V  ++ D YSKCG + +A  +F +   ++++++W A+I+G +  G     ++LF +M+
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY--SVKTVIAGSLVDFYVKC 264
           E   +P+EFT+++ LKA  S+       QIH  +I + + +  SV T +  S    Y K 
Sbjct: 397 EDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPSVGTALLAS----YSKF 448

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G   +A  +F +IEQK V++WS+++  +AQ  +   A  LF ++  + ++ + F +SS++
Sbjct: 449 GSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508

Query: 325 GVFA-DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
              A   A V+QG+Q HA + K        VS+++V MY + G ID A  +F     +++
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+W  +I+GY +HG + +A+  FR+M    ++ DGV +LAV+  C+H+GLV E Q+YF  
Sbjct: 569 VSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDS 628

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +  D ++ P +EHY+C+VD   RAG+LDE  +LI  MP      +W+TLL ACRVH ++E
Sbjct: 629 MVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVE 688

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           LG+   + LL L+  +   YV++SNI+A AG W E + +RKL   + +KK AG SW+++ 
Sbjct: 689 LGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIK 748

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
            ++H F   D +HP++++I++ L  +  R+K++ G+     + LHDI E+ KE  L  HS
Sbjct: 749 NKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQD-GYSPNTSFVLHDIAEDQKEAMLVAHS 807

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           E+LA+   L+       PG  +++ KNLRVCGDCH  +K +S I     ++RD +RFH F
Sbjct: 808 ERLALAFGLI----ATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHF 863

Query: 684 EGGVCSCGDYW 694
            GG CSCGD+W
Sbjct: 864 NGGACSCGDFW 874



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 246/493 (49%), Gaps = 13/493 (2%)

Query: 31  GVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   VK G    ++     L+DMY KCG +     VF+ M ++NVV+WT+L+ G  
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
                   ++LF +M +  + PN FT ++ + A     +++ G ++H   +K G   +  
Sbjct: 178 HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+++MY+KCG + +A  +F+ M  + +++WN ++AG  L     + L LF + +   
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
               + T+ + +K C +L  +    Q+H  ++  GF  +   + A  L D Y KCG L +
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTA--LADAYSKCGELAD 355

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A  +F +    ++V+SW+++I G  Q  ++  A+ LF ++RE  +  + F  S+M+   A
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--A 413

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             +++    QIHA   K       SV  +++  Y K G  ++A  +F  +  K+VV W+ 
Sbjct: 414 SLSILP--PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +++ + + G  + A  LF KM +  ++P+     +V+ AC+      +    F  +    
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLEL 504
           R    I   S +V    R G +D A+ + E    +  ++ W +++S    HG     +E 
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS-WNSMISGYAQHGYSMKAIET 590

Query: 505 GREVGEILLRLDG 517
            R++    +++DG
Sbjct: 591 FRQMEASGIQMDG 603



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 212/429 (49%), Gaps = 13/429 (3%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML- 74
           A  ++ C+    L    QLH  ++K GF     +   L D Y+KCGE+  A  +F     
Sbjct: 306 ATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTG 365

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVVSWTA++ G +QNG+    + LF +M    V PNEFT S  +KAS  LS +    Q
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS--LSILPP--Q 421

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+ ++  P VG +++  YSK G   +A  +F ++  K ++ W+AM++ +  AG 
Sbjct: 422 IHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVI 253
            +    LF KM   G  P+EFT +S + AC    + V  G Q H   I+  + Y     +
Sbjct: 482 CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA--ISIKYRYHDAICV 539

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           + +LV  Y + G +  A+ VF+    + ++SW+S+I GYAQ     +A+E FRQ+    +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599

Query: 314 QVDGFV-LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           Q+DG   L+ +MG   +  +VE  +   +                +VD+Y + G +DE  
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
            L  +MP     + W  ++     H   +  +G F    L  +EP D   Y+ + +  + 
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVE--LGKFSADKLLSLEPHDSSTYVLLSNIYAA 717

Query: 431 SGLVEESQE 439
           +G  +E  E
Sbjct: 718 AGKWKERDE 726



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 221/442 (50%), Gaps = 11/442 (2%)

Query: 65  GACAVFDKMLERNV-VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           GA    D++  R+  V    ++  + + G     L  F       V  +  TLS  +KA 
Sbjct: 50  GARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKAC 109

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
             +     G Q+H +C+K G +   V  G S++DMY KCG + E   +F+ MP K+++TW
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            +++ G   A    + + LF +M+  G  P+ FTF S L A  S G++  G ++H   + 
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G   SV   +  SL++ Y KCG + +A+ VF+ +E + ++SW++L+ G    E   EA+
Sbjct: 230 FGCRSSV--FVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEAL 287

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
           +LF + R    ++     ++++ + A+   +   +Q+H+   K    L  +V  ++ D Y
Sbjct: 288 QLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAY 347

Query: 363 LKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            KCG + +A  +F+     +NVV+WT II+G  ++G    AV LF +M  D V P+   Y
Sbjct: 348 SKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTY 407

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
            A+L A   S  +   Q +   +  + +  P +   + ++ S  + G  ++A ++ + + 
Sbjct: 408 SAMLKA---SLSILPPQIHAQVIKTNYQHIPSVG--TALLASYSKFGSTEDALSIFKMIE 462

Query: 482 VKPSIAIWQTLLSACRVHGDLE 503
            K  +A W  +LS     GD E
Sbjct: 463 QKDVVA-WSAMLSCHAQAGDCE 483



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 168/349 (48%), Gaps = 8/349 (2%)

Query: 161 CGRINEAARM-FDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           C R    AR   D +P + + +  N ++  Y   G   + L  F   +  G + D  T +
Sbjct: 44  CLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLS 103

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLI 277
             LKAC S+     G Q+H   +  G  +    V AG SLVD Y+KCG + E   VF+ +
Sbjct: 104 CVLKACRSVPDRVLGEQLHCLCVKCG--HDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM 161

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
            +K+V++W+SL+ G A  +  +E M LF ++R   +  + F  +S++   A    ++ G+
Sbjct: 162 PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ 221

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           ++HA + K        V NS+++MY KCGL+++A  +FN M  +++V+W  ++ G   + 
Sbjct: 222 RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNE 281

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPRIEH 456
              EA+ LF +      +     Y  V+  C++   L    Q +   L +   +   +  
Sbjct: 282 CELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNV-- 339

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            + + D+  + G L +A N+        ++  W  ++S C  +GD+ L 
Sbjct: 340 MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/690 (35%), Positives = 391/690 (56%), Gaps = 20/690 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS       G  +H   +  G   DL ++  L+DMY KC  +  A  +F  M  R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 78  VVSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +V+W A++ G+  +G     ++  L  QM    ++PN  TL   +       ++  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 136 HGMCMKSGFEWNP----------VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           H  C+++    N           ++G +++DMY+KCG +  A R+FD MPA++ +TW+A+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I G+VL     +  LLF+ M   G       +  S L+AC SL  +  G Q+H  L  SG
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
                      SL+  Y K G + +A  +FD +  K  +S+S+L+ GY Q     EA  +
Sbjct: 371 V--HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F++++  +++ D   + S++   +  A ++ G+  H          +TS+ N+++DMY K
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ID + ++FN MP +++V+W  +I GYG HGL KEA  LF +M      PDGV ++ +
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+SMP++ 
Sbjct: 549 LSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
            + +W  LL ACRV+ +++LG++V  ++  L  +   N+V++SNI++ AG ++E   +R 
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 668

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + + +G KK  G SW+E++  +H F GGD +HP + +I++ L  +   +K +LG+     
Sbjct: 669 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK-KLGYQPDTS 727

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L D++EE KE++L  HSEKLAI      G L+    K I V KNLRVCGDCH  IK +
Sbjct: 728 FVLQDLEEEEKEKALICHSEKLAIAY----GILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S + +   +VRDA RFH F+ G CSCGD+W
Sbjct: 784 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 243/469 (51%), Gaps = 18/469 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC--LSLFCQMGSSSVKPNEFTLST 118
           G ++ A  +FD++   +V ++  L+  +  +    A   L L+ +M    V PN +T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            +KA   L+    G  IH   + +G + +  V  +++DMY KC  + +AA +F  MPA+ 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 179 LITWNAMIAGYVLAGYSDKGL--LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           L+ WNAM+AGY   G     +  LL  +MQ H   P+  T  + L      G++  GT +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 237 HGFLI--------TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           H + I         S    +   ++  +L+D Y KCG L+ ARRVFD +  ++ ++WS+L
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           I G+     + +A  LF+ +  + L  +    ++S +   A    +  G+Q+HA  AK  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              D +  NS++ MY K GLID+A  LF+EM VK+ V+++ +++GY ++G A+EA  +F+
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           KM   +VEPD    ++++ ACSH   ++  +     +   + +       + ++D   + 
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKC 489

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           GR+D ++ +   MP +  I  W T+++   +HG   LG+E   + L ++
Sbjct: 490 GRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 534



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 13/315 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A +LR C+    L  G QLH  L K G   DL   N L+ MYAK G ++ A A+FD+M 
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++AL+ G++QNG A+    +F +M + +V+P+  T+ + I A   L+++++G  
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  G      + N++IDMY+KCGRI+ + ++F++MP++ +++WN MIAGY + G 
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSV 249
             +   LF +M   G  PD  TF   L AC   G V  G        HG+ +T    + +
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 582

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQL 308
                  +VD   + G L EA      +  ++ V  W +L+      +N+    ++ R +
Sbjct: 583 ------CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMI 636

Query: 309 RERSLQVDG-FVLSS 322
           +E   +  G FVL S
Sbjct: 637 QELGPEGTGNFVLLS 651


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/690 (35%), Positives = 392/690 (56%), Gaps = 20/690 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS       G  +H   +  G   DL ++  L+DMY KC  +  A  +F  M  R+
Sbjct: 16  ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75

Query: 78  VVSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +V+W A++ G+  +G     ++  L  QM    ++PN  TL   +       ++  G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 136 HGMCMKSGFEWNP----------VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           H  C+++    N           ++G +++DMY+KCG +  A R+FD MPA++ +TW+A+
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I G+VL     +  LLF+ M   G       +  S L+AC SL  +  G Q+H  L  SG
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               +      SL+  Y K G + +A  +FD +  K  +S+S+L+ GY Q     EA  +
Sbjct: 256 VHADLTA--GNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 313

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F++++  +++ D   + S++   +  A ++ G+  H          +TS+ N+++DMY K
Sbjct: 314 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 373

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ID + ++FN MP +++V+W  +I GYG HGL KEA  LF +M      PDGV ++ +
Sbjct: 374 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 433

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+SMP++ 
Sbjct: 434 LSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 493

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
            + +W  LL ACRV+ +++LG++V  ++  L  +   N+V++SNI++ AG ++E   +R 
Sbjct: 494 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 553

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + + +G KK  G SW+E++  +H F GGD +HP + +I++ L  +   +K +LG+     
Sbjct: 554 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK-KLGYQPDTS 612

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L D++EE KE++L  HSEKLAI      G L+    K I V KNLRVCGDCH  IK +
Sbjct: 613 FVLQDLEEEEKEKALICHSEKLAIAY----GILSLSEDKTIFVTKNLRVCGDCHTVIKHI 668

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S + +   +VRDA RFH F+ G CSCGD+W
Sbjct: 669 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 220/419 (52%), Gaps = 16/419 (3%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V PN +T    +KA   L+    G  IH   + +G + +  V  +++DMY KC  + +AA
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGL--LLFRKMQEHGEIPDEFTFTSTLKACGS 226
            +F  MPA+ L+ WNAM+AGY   G     +  LL  +MQ H   P+  T  + L     
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 227 LGSVGGGTQIHGFLI--------TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
            G++  GT +H + I         S    +   ++  +L+D Y KCG L+ ARRVFD + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGK 337
            ++ ++WS+LI G+     + +A  LF+ +  + L  +    ++S +   A    +  G+
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           Q+HA  AK     D +  NS++ MY K GLID+A  LF+EM VK+ V+++ +++GY ++G
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            A+EA  +F+KM   +VEPD    ++++ ACSH   ++  +     +   + +       
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSIC 364

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           + ++D   + GR+D ++ +   MP +  I  W T+++   +HG   LG+E   + L ++
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 419



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 13/315 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A +LR C+    L  G QLH  L K G   DL   N L+ MYAK G ++ A A+FD+M 
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++AL+ G++QNG A+    +F +M + +V+P+  T+ + I A   L+++++G  
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  G      + N++IDMY+KCGRI+ + ++F++MP++ +++WN MIAGY + G 
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSV 249
             +   LF +M   G  PD  TF   L AC   G V  G        HG+ +T    + +
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQL 308
                  +VD   + G L EA      +  ++ V  W +L+      +N+    ++ R +
Sbjct: 468 ------CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMI 521

Query: 309 RERSLQVDG-FVLSS 322
           +E   +  G FVL S
Sbjct: 522 QELGPEGTGNFVLLS 536



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 20/298 (6%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M  H   P+ +TF   LKAC +L     G  IH   I +G        ++ +L+D YVKC
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGL--QADLFVSTALLDMYVKC 58

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQE--ENLAEAMELFRQLRERSLQVDGFVLSS 322
            CL +A  +F  +  + +++W++++ GYA     + A A  L  Q++   L+ +   L +
Sbjct: 59  ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 323 MMGVFADFALVEQGKQIHAYAAKV---PSGLDTS-------VSNSIVDMYLKCGLIDEAT 372
           ++ + A    + QG  +HAY  +    P+    S       +  +++DMY KCG +  A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML---LDDVEPDGVAYLAVLSACS 429
            +F+ MP +N VTW+ +I G+       +A  LF+ ML   L  + P  +A  + L AC+
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACA 236

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
               +   ++  + L     +   +   + ++    +AG +D+A  L + M VK +++
Sbjct: 237 SLDHLRMGEQLHALLAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/687 (36%), Positives = 390/687 (56%), Gaps = 21/687 (3%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           + RL     C      L +   +H AL+++G   D  L N ++      G  N +  + D
Sbjct: 13  KNRLIQGFSC------LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILD 66

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +  E N+  +  ++ G + N   +  + ++  M    + P+ FT    +KA   +   E 
Sbjct: 67  QTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSEL 126

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G+++H + +K+G E +  V  S+I++Y+KCG I+ A ++FD +P K+  +W A I+GYV 
Sbjct: 127 GVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVG 186

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   + + +FR++ E G  PD F+    L AC   G +  G  I  ++  +G   +V  
Sbjct: 187 VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNV-- 244

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +A +LVDFY KCG +  AR VFD + +K+++SWSS+I GYA      EA++LF ++   
Sbjct: 245 FVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE 304

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG---LDTSV-SNSIVDMYLKCGL 367
            L+ D + +  ++   A    +E G     +A+ + +G   LD SV   +++DMY KCG 
Sbjct: 305 GLKPDCYAMVGVLCSCARLGALELGD----WASNLINGNEFLDNSVLGTALIDMYAKCGR 360

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +D A E+F  M  K+ V W   I+G    G  K+A+GLF +M    ++PD   ++ +L A
Sbjct: 361 MDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C+H+GLVEE + YF+ +     + P IEHY C+VD LGRAG LDEA  LI+SMP++ +  
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAI 480

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL  CR+H D +L   V + L+ L+  +  NYV++SNI+A +  W E  ++R +  
Sbjct: 481 VWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMS 540

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+KK+ G SW+EVD  +H F  GD +HPL+EKI+  L E+ K +K   G+V    + L
Sbjct: 541 ERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAA-GYVPTTDHVL 599

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            DI+EE KE  +  HSEKLA+   L+    +  P   I V KNLRVCGDCHE IK +S+I
Sbjct: 600 FDIEEEEKEHFIGCHSEKLAVAFGLI----STAPNDKILVVKNLRVCGDCHEAIKHISRI 655

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD  RFH F  G+CSC DYW
Sbjct: 656 AGREIIVRDNNRFHCFTDGLCSCKDYW 682


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/667 (36%), Positives = 379/667 (56%), Gaps = 14/667 (2%)

Query: 33  QLHGALVKMGFSFD--LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H   VK+GF  +  L ++N L+  Y +   ++ AC +F+++ E++ V++  L+ G+ +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G     + LF +M  S  +P++FT S  +KA   L     G Q+H + + +GF  +  V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN I+D YSK  R+ E   +FD MP    +++N +I+ Y  A   +  L  FR+MQ  G 
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIH--GFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               F F + L    +L S+  G Q+H    L T+     V      SLVD Y KC    
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV----GNSLVDMYAKCEMFE 403

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA  +F  + Q++ +SW++LI GY Q+      ++LF ++R  +L+ D    ++++   A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            FA +  GKQ+HA+  +  +  +    + +VDMY KCG I +A ++F EMP +N V+W  
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+ +  +G  + A+G F KM+   ++PD V+ L VL+ACSH G VE+  EYF  +    
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P+ +HY+C++D LGR GR  EA+ L++ MP +P   +W ++L+ACR+H +  L    
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643

Query: 509 GEILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
            E L  ++   +   YV MSNI+A AG W +   ++K  R +G+KKV   SWVEV+ +IH
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D THP  ++I + + E+   ++ E G+       + D+ E+ K ESL+ HSE+LA
Sbjct: 704 VFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDTSSVVQDVDEQMKIESLKYHSERLA 762

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +  AL+    +   G  I V KNLR C DCH  IK +SKI+K    VRD +RFH F  GV
Sbjct: 763 VAFALI----STPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGV 818

Query: 688 CSCGDYW 694
           CSCGDYW
Sbjct: 819 CSCGDYW 825



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 232/458 (50%), Gaps = 8/458 (1%)

Query: 50  NNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSS 107
            N +I  + K G+++ A  +FD M +R VV+WT LM  + +N +      LF QM   SS
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP--VVGNSIIDMYSKCGRIN 165
              P+  T +T +             Q+H   +K GF+ NP   V N ++  Y +  R++
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +F+ +P K  +T+N +I GY   G   + + LF KM++ G  P +FTF+  LKA  
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L     G Q+H   +T+GF  S    +   ++DFY K   ++E R +FD + +   +S+
Sbjct: 262 GLHDFALGQQLHALSVTTGF--SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           + +I  Y+Q +    ++  FR+++        F  ++M+ + A+ + ++ G+Q+H  A  
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
             +     V NS+VDMY KC + +EA  +F  +P +  V+WT +I+GY + GL    + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F KM   ++  D   +  VL A +    +   ++  + +     ++  +   S +VD   
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYA 498

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + G + +A  + E MP + +++ W  L+SA   +GD E
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGE 535



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 10/414 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLH   V  GFS D  + N ++D Y+K   +     +FD+M E + VS+  ++  + Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +A L  F +M         F  +T +  +  LSS++ G Q+H   + +  +    V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GNS++DMY+KC    EA  +F  +P ++ ++W A+I+GYV  G    GL LF KM+    
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
             D+ TF + LKA  S  S+  G Q+H F+I SG   +++ V +GS LVD Y KCG + +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSG---NLENVFSGSGLVDMYAKCGSIKD 505

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A +VF+ +  ++ +SW++LI  +A   +   A+  F ++ E  LQ D   +  ++   + 
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565

Query: 330 FALVEQGKQIHAYAAKVP-SGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
              VEQG +   + A  P  G+     +   ++D+  + G   EA +L +EMP + + + 
Sbjct: 566 CGFVEQGTEY--FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           W+ ++     H     A     K+   +   D  AY+++ +  + +G  E+ ++
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 14/355 (3%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N V  N++I  + K G ++ A  +FD MP ++++TW  ++  Y    + D+   LFR+M 
Sbjct: 78  NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137

Query: 207 EHGE--IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
                 +PD  TFT+ L  C          Q+H F +  GF  +    ++  L+  Y + 
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
             L  A  +F+ I +K  +++++LI GY ++    E++ LF ++R+   Q   F  S ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257

Query: 325 GV---FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
                  DFAL   G+Q+HA +       D SV N I+D Y K   + E   LF+EMP  
Sbjct: 258 KAVVGLHDFAL---GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS-ACSHSGLVEESQEY 440
           + V++ V+I+ Y +    + ++  FR+M     +     +  +LS A + S L    Q +
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374

Query: 441 FSRLCNDKRMKPRIEHY-SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              L         I H  + +VD   +    +EA+ + +S+P + +++ W  L+S
Sbjct: 375 CQALLA---TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +L +++   A  L+  +    L  G QLH  +++ G   ++   + L+DMYAKCG +  A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VF++M +RN VSW AL+     NG+ +A +  F +M  S ++P+  ++   + A    
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566

Query: 127 SSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
             VE G +    M    G          ++D+  + GR  EA ++ D MP     I W++
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626

Query: 185 MI 186
           ++
Sbjct: 627 VL 628



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 51/278 (18%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN-------------- 382
           +++ A   K     DT  SN IV+  L+ G +  A ++++EMP KN              
Sbjct: 33  RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92

Query: 383 -----------------VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLA 423
                            VVTWT+++  Y ++    EA  LFR+M        PD V +  
Sbjct: 93  GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152

Query: 424 VLSACSHS---GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +L  C+ +     V +   +  +L  D    P +   + ++ S     RLD A  L E +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFD--TNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAG--SW 536
           P K S+  + TL++     G   L  E   + L++   G  P ++     + A  G   +
Sbjct: 211 PEKDSVT-FNTLITGYEKDG---LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
              ++L  L+ + G  + A      V  +I  FY   D
Sbjct: 267 ALGQQLHALSVTTGFSRDAS-----VGNQILDFYSKHD 299


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/674 (36%), Positives = 375/674 (55%), Gaps = 35/674 (5%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L   L+DMY KC E+  A  +FDKM ER++V+WT ++ G+ + G A   L LF +M    
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V P++  + T + A   L ++     I     +  F+ + ++G ++IDMY+KCG +  A 
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 314

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD M  K++I+W+AMIA Y   G   K L LFR M   G +PD+ T  S L AC +  
Sbjct: 315 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCR 374

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           ++    Q+H      G   ++  ++A  LV FY     L +A  +FD +  +  +SWS +
Sbjct: 375 NLTQVRQVHAQASVHGMLQNL--IVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVM 432

Query: 289 ILGYAQE----------------------------ENLAEAMELFRQLRERSLQVDGFVL 320
           + G+A+                              N  E++ LF ++RE  +  D   +
Sbjct: 433 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAM 492

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            +++   A    + + + I  Y  +    LD  +  +++DM+ KCG ++ A E+F+ M  
Sbjct: 493 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE 552

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           KNV++W+ +I  YG HG  ++A+ LF  ML   + P+ +  +++L ACSH+GLVEE   +
Sbjct: 553 KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRF 612

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           FS +  D  ++  ++HY+C+VD LGRAGRLDEA  LIESM V+    +W   L ACR H 
Sbjct: 613 FSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHK 672

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           D+ L  +    LL L   NP +Y+++SNI+A+AG W +  + R L   + LKK+ G +W+
Sbjct: 673 DVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 732

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           EVD + H F  GD THP +++I+++L  +  ++ E +G+V    + LHD+ EE K   L 
Sbjct: 733 EVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL-ELVGYVPDTNFVLHDVDEELKIGILY 791

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSEKLAI   L+       P   IR+ KNLRVCGDCH F K +S I   V +VRDA RF
Sbjct: 792 SHSEKLAIAFGLI-ATPEHTP---IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRF 847

Query: 681 HRFEGGVCSCGDYW 694
           H F+ G CSCGDYW
Sbjct: 848 HHFKEGACSCGDYW 861



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 258/530 (48%), Gaps = 60/530 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H      G   ++++ N LI  Y+    ++ A  +FD M  R+ VSW+ ++ GF + G
Sbjct: 99  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +   C   F ++     +P+ +TL   I+A   L +++                      
Sbjct: 159 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ---------------------M 197

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMY KC  I +A  +FD M  + L+TW  MI GY   G +++ L+LF KM+E G +P
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 257

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D+    + + AC  LG++     I  ++    F   V  ++  +++D Y KCGC+  AR 
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV--ILGTAMIDMYAKCGCVESARE 315

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD +E+K+VISWS++I  Y       +A++LFR +    +  D   L+S++    +   
Sbjct: 316 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           + Q +Q+HA A+      +  V+N +V  Y     +D+A  LF+ M V++ V+W+V++ G
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435

Query: 393 YGK----------------------------HGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           + K                             G A E++ LF KM  + V PD VA + V
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495

Query: 425 LSACSHSGLVEESQ---EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           + AC+  G + +++   +Y  R    K+ +  +   + ++D   + G ++ A+ + + M 
Sbjct: 496 VFACAKLGAMHKARTIDDYIQR----KKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 551

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
            K  I+ W  +++A   HG      ++  ++LR  G  P    ++S ++A
Sbjct: 552 EKNVIS-WSAMIAAYGYHGQGRKALDLFPMMLR-SGILPNKITLVSLLYA 599



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 184/372 (49%), Gaps = 39/372 (10%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           F  D++L   +IDMYAKCG +  A  +FD+M E+NV+SW+A++  +  +G  +  L LF 
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            M SS + P++ TL++ + A     ++    Q+H      G   N +V N ++  YS   
Sbjct: 350 MMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYR 409

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYV----------------------------LAGY 194
            +++A  +FD M  +  ++W+ M+ G+                               G 
Sbjct: 410 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGN 469

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           +++ L+LF KM+E G +PD+    + + AC  LG++     I  ++    F   V  ++ 
Sbjct: 470 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV--ILG 527

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +++D + KCGC+  AR +FD +E+K+VISWS++I  Y       +A++LF  +    + 
Sbjct: 528 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 587

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHA-----YAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            +   L S++   +   LVE+G +  +     Y+ +     D      +VD+  + G +D
Sbjct: 588 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRA----DVKHYTCVVDLLGRAGRLD 643

Query: 370 EATELFNEMPVK 381
           EA +L   M V+
Sbjct: 644 EALKLIESMTVE 655



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  ++ ++  LA  L  C     L    Q+H      G   +L++ N L+  Y+    +
Sbjct: 352 LSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRAL 411

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQ----------------------------NGNAK 95
           + A  +FD M  R+ VSW+ ++ GF +                             GNA 
Sbjct: 412 DDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNAN 471

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             L LF +M    V P++  + T + A   L ++     I     +  F+ + ++G ++I
Sbjct: 472 ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMI 531

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           DM++KCG +  A  +FD M  K++I+W+AMIA Y   G   K L LF  M   G +P++ 
Sbjct: 532 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 591

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRV 273
           T  S L AC   G V  G +    +      YSV+  +     +VD   + G L EA   
Sbjct: 592 TLVSLLYACSHAGLVEEGLRFFSLMWED---YSVRADVKHYTCVVDLLGRAGRLDEA--- 645

Query: 274 FDLIEQKSV 282
             LIE  +V
Sbjct: 646 LKLIESMTV 654


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/669 (36%), Positives = 392/669 (58%), Gaps = 13/669 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD G ++H   VK G    + + N L++MYAKCG +  A +VF+ M  R++VSW  LM G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              N      L LF +  ++  K  + T +T IK    L  +    Q+H   +K GF   
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             V  ++ D YSKCG + +A  +F +   ++++++W A+I+G +  G     ++LF +M+
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E   +P+EFT+++ LKA  S+       QIH  +I + + +     +  +L+  Y K G 
Sbjct: 397 EDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHI--PFVGTALLASYSKFGS 450

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
             +A  +F +IEQK V++WS+++  +AQ  +   A  LF ++  + ++ + F +SS++  
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510

Query: 327 FA-DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
            A   A V+QG+Q HA + K        VS+++V MY + G ID A  +F     +++V+
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS 570

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I+GY +HG + +A+  FR+M    ++ DGV +LAV+  C+H+GLV E Q+YF  + 
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMV 630

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D ++ P +EHY+C+VD   RAG+LDE  +LI  MP      +W+TLL ACRVH ++ELG
Sbjct: 631 RDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELG 690

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +   + LL L+  +   YV++SNI+A AG W E + +RKL   + +KK AG SW+++  +
Sbjct: 691 KFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNK 750

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F   D +HP++++I++ L  +  R+K++ G+     + LHDI E+ KE  L  HSE+
Sbjct: 751 VHSFIAFDKSHPMSDQIYKKLKVIITRLKQD-GYSPNTSFVLHDIAEDQKEAMLVAHSER 809

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   L+       PG  +++ KNLRVCGDCH  +K +S I     ++RD +RFH F G
Sbjct: 810 LALAFGLI----ATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNG 865

Query: 686 GVCSCGDYW 694
           G CSCGD+W
Sbjct: 866 GACSCGDFW 874



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 245/493 (49%), Gaps = 13/493 (2%)

Query: 31  GVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   VK G    ++     L+DMY KCG +     VF+ M ++NVV+WT+L+ G  
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
                   ++LF +M +  + PN FT ++ + A     +++ G ++H   +K G   +  
Sbjct: 178 HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+++MY+KCG + +A  +F+ M  + +++WN ++AG  L     + L LF + +   
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
               + T+ + +K C +L  +    Q+H  ++  GF  +   + A  L D Y KCG L +
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTA--LADAYSKCGELAD 355

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A  +F +    ++V+SW+++I G  Q  ++  A+ LF ++RE  +  + F  S+M+   A
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK--A 413

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             +++    QIHA   K        V  +++  Y K G  ++A  +F  +  K+VV W+ 
Sbjct: 414 SLSILP--PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +++ + + G  + A  LF KM +  ++P+     +V+ AC+      +    F  +    
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLEL 504
           R    I   S +V    R G +D A+ + E    +  ++ W +++S    HG     +E 
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVS-WNSMISGYAQHGYSMKAIET 590

Query: 505 GREVGEILLRLDG 517
            R++    +++DG
Sbjct: 591 FRQMEASGIQMDG 603



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 212/429 (49%), Gaps = 13/429 (3%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML- 74
           A  ++ C+    L    QLH  ++K GF     +   L D Y+KCGE+  A  +F     
Sbjct: 306 ATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTG 365

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVVSWTA++ G +QNG+    + LF +M    V PNEFT S  +KAS  LS +    Q
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS--LSILPP--Q 421

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+ ++  P VG +++  YSK G   +A  +F ++  K ++ W+AM++ +  AG 
Sbjct: 422 IHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGD 481

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVI 253
            +    LF KM   G  P+EFT +S + AC    + V  G Q H   I+  + Y     +
Sbjct: 482 CEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHA--ISIKYRYHDAICV 539

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           + +LV  Y + G +  A+ VF+    + ++SW+S+I GYAQ     +A+E FRQ+    +
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599

Query: 314 QVDGFV-LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           Q+DG   L+ +MG   +  +VE  +   +                +VD+Y + G +DE  
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
            L  +MP     + W  ++     H   +  +G F    L  +EP D   Y+ + +  + 
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVE--LGKFSADKLLSLEPHDSSTYVLLSNIYAA 717

Query: 431 SGLVEESQE 439
           +G  +E  E
Sbjct: 718 AGKWKERDE 726



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 202/395 (51%), Gaps = 18/395 (4%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDV 173
           TLS  +KA   +     G Q+H +C+K G +   V  G S++DMY KCG + E   +F+ 
Sbjct: 101 TLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEG 160

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           MP K+++TW +++ G   A    + + LF +M+  G  P+ FTF S L A  S G++  G
Sbjct: 161 MPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            ++H   +  G   SV   +  SL++ Y KCG + +A+ VF+ +E + ++SW++L+ G  
Sbjct: 221 QRVHAQSVKFGCRSSV--FVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQ 278

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
             E   EA++LF + R    ++     ++++ + A+   +   +Q+H+   K    L  +
Sbjct: 279 LNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGN 338

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
           V  ++ D Y KCG + +A  +F+     +NVV+WT II+G  ++G    AV LF +M  D
Sbjct: 339 VMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRED 398

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIVDSLGRAG 468
            V P+   Y A+L A         S        + + +K   +H     + ++ S  + G
Sbjct: 399 RVMPNEFTYSAMLKA---------SLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFG 449

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
             ++A ++ + +  K  +A W  +LS     GD E
Sbjct: 450 STEDALSIFKMIEQKDVVA-WSAMLSCHAQAGDCE 483



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 16/353 (4%)

Query: 161 CGRINEAARM-FDVMPAKSLITWNAMIAGYVLAGYSDKGLLL-----FRKMQEHGEIPDE 214
           C R    AR   D +P +      A+ A  VL  Y+ +G++L     F   +  G + D 
Sbjct: 44  CLRDPPGARYPLDEIPRRDA----AVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDS 99

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEARRV 273
            T +  LKAC S+     G Q+H   +  G  +    V AG SLVD Y+KCG + E   V
Sbjct: 100 ATLSCVLKACRSVPDRVLGEQLHCLCVKCG--HDRGEVSAGTSLVDMYMKCGSVCEGIEV 157

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F+ + +K+V++W+SL+ G A  +  +E M LF ++R   +  + F  +S++   A    +
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           + G+++HA + K        V NS+++MY KCGL+++A  +FN M  +++V+W  ++ G 
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKP 452
             +    EA+ LF +      +     Y  V+  C++   L    Q +   L +   +  
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            +   + + D+  + G L +A N+        ++  W  ++S C  +GD+ L 
Sbjct: 338 NV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/675 (36%), Positives = 382/675 (56%), Gaps = 12/675 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +++ GF  D+ + N LI MY KCG++N A  VFDKM  R+ 
Sbjct: 214 LRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDR 273

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +NG     L LF  M    V P+  T+++ I A  +L     G QIHG 
Sbjct: 274 ISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGY 333

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++ F  +P + NS+I MYS  G I EA  +F     + L++W AMI+GY       K 
Sbjct: 334 VLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKA 393

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSL 257
           L  ++ M+  G +PDE T    L AC  L ++  G  +H      G   YS+   +A SL
Sbjct: 394 LETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI---VANSL 450

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KC C+ +A  +F    +K+++SW+S+ILG        EA+  FR++  R L+ + 
Sbjct: 451 IDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNS 509

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L  ++   A    +  GK+IHA+A +     D  + N+I+DMY++CG ++ A + F  
Sbjct: 510 VTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFS 569

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +    V +W +++TGY + G    A  LF++M+  +V P+ V ++++L ACS SG+V E 
Sbjct: 570 VD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEG 628

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            EYF+ +     + P ++HY+C+VD LGR+G+L+EA   I+ MP+KP  A+W  LL++CR
Sbjct: 629 LEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCR 688

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H  +ELG    E + + D  +   Y+++SN++AD G W++   +RK+ R  GL    G 
Sbjct: 689 IHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGC 748

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SWVEV   +H F   D+ HP  ++I+ +L    K+MKE    V G + +  DI E SK +
Sbjct: 749 SWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKE--AGVEGPESSHMDIMEASKAD 806

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
               HSE+LAI   L+  G    PG  I V KNL +C  CH  +K +S+ ++    VRDA
Sbjct: 807 IFCGHSERLAIVFGLINSG----PGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDA 862

Query: 678 TRFHRFEGGVCSCGD 692
            +FH F+GG+CSC D
Sbjct: 863 EQFHHFKGGICSCTD 877



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 240/477 (50%), Gaps = 13/477 (2%)

Query: 45  FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
             L L N L+ M+ + G +  A  VF +M +RN+ SW  L+ G+ + G     L L+ +M
Sbjct: 139 LSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM 198

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               VKP+ +T    ++  G + ++  G +IH   ++ GFE +  V N++I MY KCG +
Sbjct: 199 LWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDV 258

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           N A  +FD MP +  I+WNAMI+GY   G   +GL LF  M ++   PD  T TS + AC
Sbjct: 259 NTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC 318

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
             LG    G QIHG+++ + F       I  SL+  Y   G + EA  VF   E + ++S
Sbjct: 319 ELLGDDRLGRQIHGYVLRTEF--GRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVS 376

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I GY       +A+E ++ +    +  D   ++ ++   +    ++ G  +H  A 
Sbjct: 377 WTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAK 436

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           +      + V+NS++DMY KC  ID+A E+F+    KN+V+WT II G   +    EA+ 
Sbjct: 437 QKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALF 496

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVD 462
            FR+M +  ++P+ V  + VLSAC+  G +   +E  +   +  R     + +  + I+D
Sbjct: 497 FFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHA---HALRTGVSFDGFMPNAILD 552

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
              R GR++ A     S  V   +  W  LL+     G    G    E+  R+   N
Sbjct: 553 MYVRCGRMEYAWKQFFS--VDHEVTSWNILLTGYAERGK---GAHATELFQRMVESN 604



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 8/278 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  CS    LD G+ LH    + G     ++ N LIDMYAKC  ++ A  +F   L
Sbjct: 412 IAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTL 471

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+N+VSWT+++ G   N      L  F +M    +KPN  TL   + A   + ++  G +
Sbjct: 472 EKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKE 530

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +++G  ++  + N+I+DMY +CGR+  A + F  +  + + +WN ++ GY   G 
Sbjct: 531 IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHE-VTSWNILLTGYAERGK 589

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
                 LF++M E    P+E TF S L AC   G V  G +   +  +  + YS+   + 
Sbjct: 590 GAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLE---YFNSMKYKYSIMPNLK 646

Query: 255 --GSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
               +VD   + G L EA      +  K   + W +L+
Sbjct: 647 HYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 44/283 (15%)

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           NL  AM     + E  + V+     +++ +       ++G ++++Y +   S L   + N
Sbjct: 86  NLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGN 145

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +++ M+++ G + +A  +F  M  +N+ +W V++ GY K GL  EA+ L+ +ML   V+P
Sbjct: 146 ALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKP 205

Query: 417 DGVAYLAVLSACS-----------------------------------HSGLVEESQEYF 441
           D   +  VL  C                                      G V  ++  F
Sbjct: 206 DVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRV 498
            ++ N  R+      ++ ++      G   E   L   M   PV P +    ++++AC +
Sbjct: 266 DKMPNRDRIS-----WNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320

Query: 499 HGDLELGREVGEILLRLD-GDNPVNYVMMSNIHADAGSWNECE 540
            GD  LGR++   +LR + G +P  +  +  +++  G   E E
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAE 363


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/707 (36%), Positives = 388/707 (54%), Gaps = 38/707 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K+  L  G Q+HGA+VKMGF  D+ + N LI  Y +CGE++    VFDKM ERNV
Sbjct: 146 LSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNV 205

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+L+ G+ + G  K  +SLF +M    ++PN  T+   I A   L  ++ G Q+   
Sbjct: 206 VSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTC 265

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +   E N ++ N+++DMY KCG I++A ++FD    K+L+ +N +++ YV  G + + 
Sbjct: 266 IGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREV 325

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +  +M +HG  PD  T  S + AC  L  V  G   HG+++ +G        +  +++
Sbjct: 326 LAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDN--VCNAII 383

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY-------------------------- 292
           + Y+KCG    A RVFD +  K+ +SW+SLI G+                          
Sbjct: 384 NMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNT 443

Query: 293 -----AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
                 QE    EA+ELFR ++   +  D   +  +         ++  K IH Y  K  
Sbjct: 444 MIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD 503

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              D  +  ++VDM+ +CG    A ++FN+M  ++V  WT  I      G    A+ LF 
Sbjct: 504 IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFD 563

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +ML   ++PDGV ++A+L+A SH GLVE+    F  + +   + P+  HY C+VD LGRA
Sbjct: 564 EMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRA 623

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G L EA +LI SM ++P+  IW +LL+ACRVH ++++     E +  LD +    +V++S
Sbjct: 624 GLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLS 683

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           NI+A AG W++  ++R   + KG  K+ G S +E++ +I  F  GD++HP    I  +L 
Sbjct: 684 NIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLK 743

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           E+  R++ ++G+V  +   L D+ E+ KE  L  HSEKLAI  AL+  G     G  IRV
Sbjct: 744 EICCRLR-DIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTG----QGMPIRV 798

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLR+C DCH F K +SK      +VRD  RFH F+ G CSCGDYW
Sbjct: 799 AKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 244/533 (45%), Gaps = 57/533 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG------ACAVFDKMLERNVVS-----W 81
           QLH  + K G +   +    L ++ + C EM        A    +  +E N +      +
Sbjct: 51  QLHSQITKNGLNHHPL---SLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMF 107

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ++L+ GF   G     + +F Q+      P+ FT    + A    +++  G Q+HG  +K
Sbjct: 108 SSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVK 167

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            GFE +  V NS+I  Y +CG I+   R+FD M  +++++W ++I GY   G   + + L
Sbjct: 168 MGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSL 227

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +M E G  P+  T    + AC  L  +  G Q+   +        V  ++  +LVD Y
Sbjct: 228 FFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCI--GELELEVNALMVNALVDMY 285

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
           +KCG + +AR++FD    K+++ +++++  Y ++    E + +  ++ +   + D   + 
Sbjct: 286 MKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITML 345

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMP 379
           S +   ++   V  GK  H Y  +  +GL+   +V N+I++MY+KCG  + A  +F+ M 
Sbjct: 346 SAVSACSELDDVSCGKWCHGYVLR--NGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403

Query: 380 VKNVVTWTVIITGYGKHG-------------------------------LAKEAVGLFRK 408
            K  V+W  +I G+ ++G                               + KEA+ LFR 
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M  + +  D V  + V SAC + G ++ ++ +       K +   +   + +VD   R G
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAK-WIHGYIKKKDIHFDMHLGTALVDMFARCG 522

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLDG 517
               A  +   M VK  ++ W   + A  + G+    +EL  E+ +  ++ DG
Sbjct: 523 DPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDG 574



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 33/320 (10%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  +  ++  CS+   +  G   HG +++ G      + N +I+MY KCG+   AC VF
Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVF 399

Query: 71  DKMLERNVVSWTALMCGFLQNGNA-------------------------------KACLS 99
           D+ML +  VSW +L+ GF++NG+                                K  + 
Sbjct: 400 DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIE 459

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           LF  M S  +  ++ T+     A G L +++    IHG   K    ++  +G +++DM++
Sbjct: 460 LFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFA 519

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           +CG    A ++F+ M  + +  W A I    + G     + LF +M + G  PD   F +
Sbjct: 520 RCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVA 579

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE- 278
            L A    G V  G  I   +    +  + + V  G +VD   + G L EA  + + ++ 
Sbjct: 580 LLTALSHGGLVEQGWHIFRSM-KDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQM 638

Query: 279 QKSVISWSSLILGYAQEENL 298
           + + + W SL+      +N+
Sbjct: 639 EPNDVIWGSLLAACRVHKNV 658


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/664 (36%), Positives = 386/664 (58%), Gaps = 8/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+ +HG LVK GF     + N LI  YAK   +  A  VFD+M +R+++SW +++ G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG     + LF +M     + +  TL + + A         G  +HG  +++G      +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++DMYS C       ++F  M  K++++W AMI  Y  AG+ DK   LF++M   G 
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD F  TS L A     S+  G  +HG+ I +G    +   +A +L++ YVKCG + EA
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLP--VANALMEMYVKCGYMEEA 240

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +FD + +K  ISW++LI GY++     EA  LF ++  + L+ +   ++ ++   A  
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           + +E+G+++HAYA +     D  V+N++VDMY+KCG +  A  LF+ +  KN+++WT++I
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GYG HG  ++A+ LF +M    ++PD  ++ A+L ACSHSGL +E   +F+ + N+ R+
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P+++HY+C+VD L   G L EA   IE+MP++P  +IW +LL  CR+H +++L  +V E
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           ++  L+ +N   YV+++NI+A+A  W    +L+     +GL++  G SW+EV  + H F+
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFF 539

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             +  HP   +I + L ++ +RM+EE G     KYAL    +   +E+L  HS KLA+  
Sbjct: 540 AENRNHPQGMRIAEFLDDVARRMQEE-GHDPKKKYALMGADDAVHDEALCGHSSKLAVAF 598

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
               G LN   G+ IRV KN RVC  CHE  K +SK+     ++RD+ RFH FE G CSC
Sbjct: 599 ----GVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSC 654

Query: 691 GDYW 694
             YW
Sbjct: 655 RGYW 658



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 211/409 (51%), Gaps = 21/409 (5%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
           +G+ +HG  +K GF     V N++I  Y+K  RI +A  +FD MP + +I+WN++I G  
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G  DK + LF +M   G+  D  T  S + AC        G  +HG+ + +G     +
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLI--SE 119

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           T +  +L+D Y  C       ++F  +EQK+V+SW+++I  Y +  +  +   LF+++  
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLI 368
             ++ D F ++S +  FA    ++ GK +H YA  + +G++    V+N++++MY+KCG +
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYA--IRNGIEEVLPVANALMEMYVKCGYM 237

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +EA  +F+ +  K+ ++W  +I GY +  LA EA  LF +MLL  + P+ V    +L A 
Sbjct: 238 EEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAA 296

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +    +E  +E  +       ++      + +VD   + G L  A+ L + +  K  I+ 
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFV-ANALVDMYVKCGALLLARRLFDMLTNKNLIS- 354

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           W  +++   +HG    GR+   +  ++ G         S I  DAGS++
Sbjct: 355 WTIMIAGYGMHGR---GRDAIALFEQMKG---------SGIQPDAGSFS 391



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 155/308 (50%), Gaps = 5/308 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  +L   + N  L +G  +HG  ++ G    L + N L++MY KCG M  A  +FD + 
Sbjct: 189 ITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVT 248

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +++ +SW  L+ G+ ++  A    +LF +M    ++PN  T++  + A+  LSS+E G +
Sbjct: 249 KKDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGRE 307

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++ G+  +  V N+++DMY KCG +  A R+FD++  K+LI+W  MIAGY + G 
Sbjct: 308 MHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGR 367

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               + LF +M+  G  PD  +F++ L AC   G    G +     + +      K    
Sbjct: 368 GRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFN-AMRNEHRIEPKLKHY 426

Query: 255 GSLVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
             +VD     G L EA    +   IE  S I W SL+ G     N+  A ++   + E  
Sbjct: 427 ACMVDLLCHTGNLKEAYEFIETMPIEPDSSI-WVSLLRGCRIHRNVKLAEKVAEMVFELE 485

Query: 313 LQVDGFVL 320
            +  G+ +
Sbjct: 486 PENTGYYV 493


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/720 (34%), Positives = 402/720 (55%), Gaps = 74/720 (10%)

Query: 39  VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           VK  FS++++L+      YAK G +  A  VF++M E + VSWTA++ G+ Q G  +  +
Sbjct: 76  VKSVFSWNIILSG-----YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAI 130

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            +F +M S  V P +FTL+  + +   +  +  G ++H   +K G      V NS+++MY
Sbjct: 131 GMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMY 190

Query: 159 SKCGRINEAARMFDVMPAKS-------------------------------LITWNAMIA 187
           +K G    A  +FD M  KS                               +++WNAMI+
Sbjct: 191 AKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMIS 250

Query: 188 GYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           GY   G+  + L +F KM  +    PD+FT  S L AC +L ++  G QIH  +I + F 
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310

Query: 247 ------------YS-------------------VKTVIAGSLVDFYVKCGCLVEARRVFD 275
                       YS                   +  +   +L+D YVK G +  ARR+FD
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  + V++W+++I+GY Q     +AMELFR + +   + + + L++M+ V +  A ++ 
Sbjct: 371 SLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDH 430

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYG 394
           G+QIHA A +  +    SVSN+++ MY K G I++A  +FN +  K + +TWT +I    
Sbjct: 431 GRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +HGL +EA+ LF +ML + ++PD + Y+ VLSAC+H GLVE+ + Y++ + N  ++ P  
Sbjct: 491 QHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTP 550

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
            HY+C++D  GRAG L EA   IE+MP++P +  W +LL++C+VH ++EL     E LL 
Sbjct: 551 SHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLL 610

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           ++ +N   Y  ++N+++  G W     +RK  + KG+KK  G SWV++  ++H F   D 
Sbjct: 611 IEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDG 670

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
            HP  + I++++ ++ K +K ++GFV   +  LHD++EE KE+ L  HSEKLAI   L+ 
Sbjct: 671 LHPQRDAIYEMMAKIWKEIK-KMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLIC 729

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              N      +R+ KNLRVC DCH  IK +SK++    +VRDATRFH F+ G+CSC DYW
Sbjct: 730 TPEN----TTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 228/485 (47%), Gaps = 74/485 (15%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK-- 72
           L + L  C+    L  G ++H  +VK G S  + + N L++MYAK G+   A  VFD+  
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207

Query: 73  -----------------------------MLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                        M+ER+VVSW A++ G+ Q+G  +  L +F +
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSK 267

Query: 104 M-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC- 161
           M   SS KP++FTL++ + A   L +++ G QIH   +++ F+    VGN++I MYSK  
Sbjct: 268 MLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG 327

Query: 162 --------------------------------GRINEAARMFDVMPAKSLITWNAMIAGY 189
                                           G IN A R+FD +  + ++ W AMI GY
Sbjct: 328 GVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGY 387

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V  G++   + LFR M + G  P+ +T  + L    SL S+  G QIH     SG   SV
Sbjct: 388 VQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSV 447

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++ +L+  Y K G + +AR VF+LI  ++  I+W+S+I+  AQ     EA+ LF ++
Sbjct: 448 S--VSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERM 505

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGL 367
            E  ++ D      ++       LVEQG+  +         + T    + ++D++ + GL
Sbjct: 506 LENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGL 565

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA--- 423
           + EA      MP++ +V+ W  ++     H   + A     ++LL + E  G AY A   
Sbjct: 566 LQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSG-AYSALAN 624

Query: 424 VLSAC 428
           V SAC
Sbjct: 625 VYSAC 629



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GK IHA   K    L   + N++++ Y K G I +A  +F+EMPVK+V +W +I++GY K
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 396 HGLAKE-------------------------------AVGLFRKMLLDDVEPDGVAYLAV 424
            G  +E                               A+G+FR+M+ DDV P       V
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESM 480
           L++C+    +   ++  S +     +K  +  Y  + +SL     ++G    AK + + M
Sbjct: 152 LASCAAVECLGIGRKVHSFV-----VKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM 206

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
            +K S + W T++S+    G ++L +   E ++  D
Sbjct: 207 KLK-STSSWNTMISSHMQSGLVDLAQVQFEQMIERD 241


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 408/741 (55%), Gaps = 67/741 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L+ C +      G   HG +   GF  ++ + N L+ MY++ G +  A  VFD++ 
Sbjct: 152 LPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEIT 211

Query: 75  ER---NVVSWTALMCGFLQNGNAKACLSLFCQMGS------SSVKPNEFTLSTNIKASGV 125
            +   +V+SW +++   ++  N +  L LF +M +      ++ + +  ++   + A   
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACAS 271

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L ++    +IH   +++G   +  V N++ID Y+KCG + +A  +F+VM  K +++WNAM
Sbjct: 272 LKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAM 331

Query: 186 IAGY------------------------------VLAGYSDKG-----LLLFRKMQEHGE 210
           + GY                              V+AGY+ +G     L  F++M  +G 
Sbjct: 332 VTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGS 391

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF----------PYSVKTVIAGSLVDF 260
            P+  T  S L AC SLG++  G + H + +                    V+  +L+D 
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451

Query: 261 YVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--D 316
           Y KC     AR +F+ I   +++V++W+ +I GYAQ  +  +A++LF ++  +   V  +
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPN 511

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV---SNSIVDMYLKCGLIDEATE 373
            + +S ++   A  + +  GKQIHAY  +     ++SV   +N ++DMY KCG +D A  
Sbjct: 512 AYTISCILMACAHLSSLRMGKQIHAYVTR-HHEYESSVYFVANCLIDMYSKCGDVDTARN 570

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ MP +N V+WT +++GYG HG  KEA+ +F KM      PD +++L +L ACSHSG+
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V++  +YF  + +D  +    +HY+C++D L R+GRLD+A   I+ MP++PS AIW  LL
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           SACRVH ++EL       L+ +  +N  +Y ++SNI+A A  W +  R+R+L +  G+KK
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SWV+  K    F+ GD +HPL+ +I+ +L  +  R+K  +G+V    +ALHD+ +E
Sbjct: 751 RPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK-VMGYVPETNFALHDVDDE 809

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            K   L  HSEKLA+   L    L   PG  IR+ KNLRVCGDCH     +SKI+    +
Sbjct: 810 EKNNLLTEHSEKLALAYGL----LTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEII 865

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD++RFH F+ G CSCG YW
Sbjct: 866 VRDSSRFHHFKNGSCSCGGYW 886



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 252/528 (47%), Gaps = 67/528 (12%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L   ++  Y  CG  + A +V ++++    V W  L+   ++ G     + + C+M  + 
Sbjct: 85  LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
            KP+ FTL   +KA G L S  +G   HG+   +GFE N  V N+++ MYS+ G + +A+
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204

Query: 169 RMFDVMPAKSL---ITWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTS 219
            +FD +  K +   I+WN+++A +V        L LF +M      +   E  D  +  +
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            L AC SL ++    +IH + I +G        +  +L+D Y KCG + +A  VF+++E 
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNG--TFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS------------------ 321
           K V+SW++++ GY Q      A ELF+ +R+ ++ +D    S                  
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 322 -----------------SMMGVFADFALVEQGKQIHAYAAK------------VPSGLDT 352
                            S++   A    + QG + HAY+ K               G D 
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
            V N+++DMY KC     A  +FN +P   +NVVTWTV+I GY ++G + +A+ LF +M+
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 411 LDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRA 467
                V P+      +L AC+H   +   ++  + +      +  +   + C++D   + 
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           G +D A+N+ +SMP +  ++ W +++S   +HG    G+E  +I  ++
Sbjct: 563 GDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKM 606



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 21/231 (9%)

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H+Y +  P  L T V    V  YL CG   +A  +   +     V W +++  + + G  
Sbjct: 77  HSYVS--PKSLGTGV----VASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRL 130

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
             A+G+  +ML    +PD       L AC           +   +C +   +  +   + 
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNG-FESNVFVCNA 189

Query: 460 IVDSLGRAGRLDEAKNLIESMPVK--PSIAIWQTLLSACRVHGD-----LELGREVGEIL 512
           +V    R+G L++A  + + +  K    +  W ++++A  V G      L+L  E+  I+
Sbjct: 190 LVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA-HVKGSNPRTALDLFSEMTTIV 248

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
                +   + + + NI         C  L+ L ++K +   A R+    D
Sbjct: 249 HEKATNERSDIISIVNI------LPACASLKALPQTKEIHSYAIRNGTFAD 293


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/662 (37%), Positives = 378/662 (57%), Gaps = 7/662 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++H  + KMGF  D+ +   L+ +Y++ G ++ A  VF  M  ++V SW A++ GF Q
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NGNA   L +  +M    VK +  T+++ +        V NG+ IH   +K G + +  V
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I+MYSK GR+ +A  +FD M  + L++WN++IA Y         L  F+ MQ  G 
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  T  S       L        I GF+I   +      VI  +LV+ Y K G +  A
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREW-LDKDVVIGNALVNMYAKLGYMNCA 378

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDGFVLSSMMGVFAD 329
             VFD + +K  ISW++L+ GY Q    +EA++ +  + E R    +     S++  ++ 
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++QG +IHA   K    LD  V+  ++D+Y KCG +++A  LF E+P    V W  I
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG  +EA+ LF+ ML + V+ D + ++++LSACSHSGLV+E Q+ F  +  +  
Sbjct: 499 IASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG 558

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +KP ++HY C+VD LGRAG L++A  L+ +MP++P  +IW  LLSAC+++G+ ELG    
Sbjct: 559 IKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLAS 618

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + LL +D +N   YV++SNI+A+   W    ++R LAR +GL+K  G S V V  +   F
Sbjct: 619 DRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVF 678

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
           Y G+ THP   +I++ L  +  +MK  LG+V    +   DI+E+ KE+ L  HSE+LAI 
Sbjct: 679 YTGNQTHPKYTEIYKELKVLSAKMK-SLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIA 737

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
                G ++  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+ RFH F+ G+CS
Sbjct: 738 F----GIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICS 793

Query: 690 CG 691
           C 
Sbjct: 794 CA 795



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 256/474 (54%), Gaps = 13/474 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  L+  G S +++L+  LI++Y   G+++ + + FD + ++N+ SW +++  +++ G
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 93  N---AKACLS-LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
               A  C++ LF   G   ++P+ +T    +KA     S+ +G ++H    K GFE + 
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDV 156

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V  S++ +YS+ G ++ A ++F  MP K + +WNAMI+G+   G +   L +  +M+  
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G   D  T  S L  C     V  G  IH  ++  G    V   ++ +L++ Y K G L 
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV--FVSNALINMYSKFGRLQ 274

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A+ VFD +E + ++SW+S+I  Y Q  + + A+  F+ ++   ++ D   + S+  +F+
Sbjct: 275 DAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 329 DFALVEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
             +     + I  +  +      D  + N++V+MY K G ++ A  +F+++P K+ ++W 
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 388 VIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
            ++TGY ++GLA EA+  +  M    D  P+   +++++ A SH G +++  +  ++L  
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIK 454

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +  +   +   +C++D  G+ GRL++A +L   +P   S+  W  ++++  +HG
Sbjct: 455 NS-LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHG 506



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 215/419 (51%), Gaps = 14/419 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+++  +  GV +H  ++K G   D+ ++N LI+MY+K G +  A  VFD+M 
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R++VSW +++  + QN +    L  F  M    ++P+  T+ +       LS       
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344

Query: 135 IHGMCMKSGFEW---NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           I G  ++   EW   + V+GN++++MY+K G +N A  +FD +P K  I+WN ++ GY  
Sbjct: 345 ILGFVIRR--EWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402

Query: 192 AGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            G + + +  +  M+E    IP++ T+ S + A   +G++  G +IH  LI +     V 
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV- 461

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +A  L+D Y KCG L +A  +F  I + + + W+++I          EA++LF+ +  
Sbjct: 462 -FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA 520

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLI 368
             ++ D     S++   +   LV++G++      K   G+  S+ +   +VD+  + G +
Sbjct: 521 ERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK-EYGIKPSLKHYGCMVDLLGRAGYL 579

Query: 369 DEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++A EL   MP++ +   W  +++    +G A+  +G      L +V+ + V Y  +LS
Sbjct: 580 EKAYELVRNMPIQPDASIWGALLSACKIYGNAE--LGTLASDRLLEVDSENVGYYVLLS 636



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           V   K++HA         +  +S  ++++Y+  G I  +   F+ +  KN+ +W  II+ 
Sbjct: 35  VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94

Query: 393 YGKHGLAKEAVGLFRKMLL----DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           Y + G   EA+    ++        + PD   +  +L AC    LV+  + +    C   
Sbjct: 95  YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDGKKVH----CCVF 148

Query: 449 RMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +M    + +  + +V    R G LD A  +   MPVK  +  W  ++S
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMIS 195


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/640 (38%), Positives = 380/640 (59%), Gaps = 20/640 (3%)

Query: 68  AVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
           ++F K +++ +V SW +++  F ++G++   L  F  M   S+ PN  T    IK+   L
Sbjct: 40  SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             +  G QIH      G+  +  V +++IDMYSKCG +N+A ++FD +P +++++W +MI
Sbjct: 100 YDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMI 159

Query: 187 AGYVLAGYSDKGLLLFRKM-----QEHGEIP------DEFTFTSTLKACGSLGSVGGGTQ 235
           +GYV    + + + LF++       ++ EI       D       + AC  +        
Sbjct: 160 SGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +HG  +  GF   +   +  +L+D Y KCG +  +R+VFD +E+  V SW+SLI  YAQ 
Sbjct: 220 VHGLAVKKGFEGCL--AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 296 ENLAEAMELFRQLRER-SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
               EA  LF  + +R  ++ +   LS+++   A    ++ GK IH    K+    +  V
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             SIVDMY KCG ++ A + F+ +  KNV +WTV++ GYG HG  KEA+ +F +M+   +
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P+ + +++VL+ACSH+GL++E   +F+++  +  ++P IEHYSC+VD LGRAG L EA 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            LI+ M VKP   +W +LL ACR+H ++ELG      L +LD  N   YV++SNI+ADAG
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W++ ER+R L ++ GL K  G S VE    +H F  GD  HP  EKI++ L E+  ++ 
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKL- 576

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           +E+G++  V   L+D+  E K   LRVHSEKLA+      G +N  PG VI++ KNLR+C
Sbjct: 577 QEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAF----GIMNSVPGSVIQIIKNLRIC 632

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           GDCH  IK +SKI+    V+RD+ RFH F+ G+CSCGDYW
Sbjct: 633 GDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 216/438 (49%), Gaps = 24/438 (5%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS    L  G Q+H      G+  D+ + + LIDMY+KCG +N 
Sbjct: 80  LSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLND 139

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC-----------QMGSSSVKPNEF 114
           A  +FD++ ERNVVSWT+++ G++QN  A+  + LF            ++    V  +  
Sbjct: 140 ARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSV 199

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
            L   I A   +        +HG+ +K GFE    VGN+++D Y+KCG I+ + ++FD M
Sbjct: 200 LLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGM 259

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGG 233
               + +WN++IA Y   G S +   LF  M + GE+  +  T ++ L AC   G++  G
Sbjct: 260 EETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG 319

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             IH  ++      ++  V+  S+VD Y KCG +  AR+ FD +++K+V SW+ ++ GY 
Sbjct: 320 KCIHDQVVKMELEDNL--VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYG 377

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
              +  EAM++F ++    ++ +     S++   +   L+++G     +  K+    D  
Sbjct: 378 MHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH---WFNKMKCEFDVE 434

Query: 354 VS----NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRK 408
                 + +VD+  + G + EA  L  EM VK + + W  ++     H   +      RK
Sbjct: 435 PGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARK 494

Query: 409 MLLDDVEPDGVAYLAVLS 426
           +    ++P    Y  +LS
Sbjct: 495 LF--KLDPSNCGYYVLLS 510


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 403/760 (53%), Gaps = 102/760 (13%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  ++K G    + L N+L+  YAK G +  A  VFD+M  ++  SW  L+ G+ +
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 91  NGNAKA-------------------------------CLSLFCQMGSSSVKPNEFTLSTN 119
            GN +                                 + +F +M S  V P++FT+S  
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG----------------- 162
           + +     +++ G +IH   +K G      V  S+++MY+KCG                 
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 163 --------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QE 207
                         +   AA  F+ MP + +++WN+MI+GY   GY+ + L++F KM  E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-----TSGF----------------- 245
               PD FT  S L AC +L  +  G QIH +++     TSG                  
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 246 ---------PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
                      ++  +   SL+D Y K G +  AR +F+ +  + V++W+++I+GY Q  
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A+ELFR +     + + + L++M+ V +   ++E GKQIHA A K       SV+N
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448

Query: 357 SIVDMYLKCGLIDEATELFNEMP--VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           +++ MY K G I+ A  +F ++P   K +V+WT +I    +HGL KEA+ LF +ML   +
Sbjct: 449 ALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +PD + Y+ VLSAC+H GLVE+ ++Y++ +     ++P + HY+C++D  GRAG L EA 
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             IESMP++P    W +LL++C++H + +L +   E LL +D  N   Y+ ++N+++  G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W    + RKL + +G++K  G SW+ +  E+H F   D  HP  ++I++++ E+ + +K
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
            ++GF+   +  LHD++EE KE+ L+ HSEKLAI   L    LN      +R+ KNLRVC
Sbjct: 688 -KMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGL----LNTPENTALRIMKNLRVC 742

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  IK +SK++    +VRDATRFH F+ G CSC DYW
Sbjct: 743 NDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 231/499 (46%), Gaps = 83/499 (16%)

Query: 8   LVSERQ-----RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           ++SER       +++ L  C+ N  LD G ++H  +VK+G    + +   L++MYAKCG+
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 63  MNGACAVFD-------------------------------KMLERNVVSWTALMCGFLQN 91
              A  VFD                               KM +R++VSW +++ G+ Q 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 92  GNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           G     L +F +M    S+KP+ FTL++ + A   L  +  G QIH   +++  E +  V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312

Query: 151 GNSIIDMYSKCGRINEAARMF-------------------------DVMPAKSL------ 179
           GN++I MY+K G + E AR+                          +V PA+ +      
Sbjct: 313 GNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 180 ---ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
              + W AMI GYV  G  +  L LFR M   G  P+ +T  + L    SL  +  G QI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQE 295
           H   I +G   S    +  +L+  Y K G +  A+RVFDL   +K ++SW+S+I+  AQ 
Sbjct: 432 HASAIKAG--ESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               EA+ LF ++    ++ D      ++       LVEQG++ +    +V   ++ ++S
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE-IEPTLS 548

Query: 356 NS--IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
           +   ++D+Y + GL+ EA      MP++ + + W  ++     H  A  A     ++LL 
Sbjct: 549 HYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLI 608

Query: 413 DVEPDGVAYLA---VLSAC 428
           D    G AYLA   V SAC
Sbjct: 609 DPGNSG-AYLALANVYSAC 626



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 52/351 (14%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------ 60
           SL  +   LA  L  C+    L+ G Q+H  +++        + N LI MYAK       
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 61  ---------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
                                      G +  A  +F+K+ +R+VV+WTA++ G++QNG 
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF  M +   +PN +TL+  +  S  L+ +E+G QIH   +K+G    P V N+
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 154 IIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           +I MY+K G IN A R+FD +P   K +++W +MI      G   + + LF +M   G  
Sbjct: 450 LIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMK 508

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVE 269
           PD  T+   L AC  +G V  G + +  +      + ++  ++    ++D Y + G L E
Sbjct: 509 PDHITYVGVLSACTHVGLVEQGRKYYNMMTEV---HEIEPTLSHYACMIDLYGRAGLLQE 565

Query: 270 ARRVFDLIEQKSV----ISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           A   +  IE   +    I+W SL+      +N     +L +   ER L +D
Sbjct: 566 A---YLFIESMPIEPDNIAWGSLLASCKIHKN----ADLAKVAAERLLLID 609


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/658 (36%), Positives = 366/658 (55%), Gaps = 51/658 (7%)

Query: 45  FDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FD ML  D      L+  YAK G +    A FD+M  R+ VS+   + GF  N   +  L
Sbjct: 81  FDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESL 140

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            LF +M     +P E+T+ + + AS  L  +  G QIHG  +   F  N  + N++ DMY
Sbjct: 141 ELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMY 200

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           +KCG I +A  +FD +  K+L++WN MI+GY   G  +K + L  +M+  G +PD+ T +
Sbjct: 201 AKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMS 260

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
                                           T+IA      Y +CG + EARRVF   +
Sbjct: 261 --------------------------------TIIAA-----YCQCGRVDEARRVFSEFK 283

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           +K ++ W+++++GYA+     +A+ LF ++    ++ D + LSS++   A  A +  G+ 
Sbjct: 284 EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQA 343

Query: 339 IHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +H  +  + +GL+ +  VS++++DMY KCG ID+A  +FN MP +NVV+W  +I G  ++
Sbjct: 344 VHGKS--ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G  K+A+ LF  ML    +PD V ++ +LSAC H   +E+ QEYF  + N   M P ++H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDH 461

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y+C+V+ LGR GR+++A  LI++M   P   IW TLLS C   GD+         L  LD
Sbjct: 462 YACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELD 521

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
               V Y+M+SN++A  G W +   +R L +SK +KK AG SW+E+D E+H F   D TH
Sbjct: 522 PTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTH 581

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P +E I++ L  +  +++EE GF       LHD+ E+ K +S+  HSEKLA+   L++  
Sbjct: 582 PESEDIYEKLNMLIGKLQEE-GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
               P   IR+ KN+R+C DCHEF+K  S+I+    ++RD+ RFH F  G CSC D W
Sbjct: 641 NGISP---IRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 155/567 (27%), Positives = 263/567 (46%), Gaps = 95/567 (16%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L   ++ L L YG Q+HG+++   F  ++ + N L DMYAKCGE+  A  +FD + ++N+
Sbjct: 162 LNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNL 221

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++ G+ +NG  + C+ L  QM  S   P++ T+ST                    
Sbjct: 222 VSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMST-------------------- 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                          II  Y +CGR++EA R+F     K ++ W AM+ GY   G  +  
Sbjct: 262 ---------------IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDA 306

Query: 199 LLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           LLLF +M  EH E PD +T +S + +C  L S+  G  +HG  I +G   ++  +++ +L
Sbjct: 307 LLLFNEMLLEHIE-PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL--LVSSAL 363

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG + +AR VF+L+  ++V+SW+++I+G AQ  +  +A+ELF  + ++  + D 
Sbjct: 364 IDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               + +G                                I+   L C  I++  E F+ 
Sbjct: 424 V---TFIG--------------------------------ILSACLHCNWIEQGQEYFDS 448

Query: 378 MPVKNVVTWTV-----IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           +  ++ +T T+     ++   G+ G  ++AV L + M  D   PD + +  +LS CS  G
Sbjct: 449 ISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKG 505

Query: 433 LVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI-W- 489
            +  ++     L   D  +       S +  S+GR   +   +NL++S  VK      W 
Sbjct: 506 DIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWI 565

Query: 490 ------QTLLSACRVHGDLELGREVGEIL---LRLDGDNPVNYVMMSNIHADAGSWNECE 540
                     S  R H + E   E   +L   L+ +G  P   +++ ++  D    + C 
Sbjct: 566 EIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICF 625

Query: 541 RLRKLARSKGL-KKVAGRSWVEVDKEI 566
              KLA + GL KK  G S + + K I
Sbjct: 626 HSEKLALAFGLIKKPNGISPIRIIKNI 652



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 18/183 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  +  C+K   L +G  +HG  +  G + +L++++ LIDMY+KCG ++ A +VF+ M 
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMP 384

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVVSW A++ G  QNG+ K  L LF  M     KP+  T    + A    + +E G +
Sbjct: 385 TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQE 444

Query: 135 I-------HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA-KSLITWNA 184
                   HGM         P + +   ++++  + GRI +A  +   M      + W+ 
Sbjct: 445 YFDSISNQHGM--------TPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496

Query: 185 MIA 187
           +++
Sbjct: 497 LLS 499


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/700 (35%), Positives = 393/700 (56%), Gaps = 17/700 (2%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLN--NDLIDMY 57
           ++R +F L S  Q     L+  +    L +G  +H  L     ++ D  +N  N LI++Y
Sbjct: 9   LSRSNF-LASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLY 67

Query: 58  AKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTL 116
            KC E++ A  +FD M  RNVVSW+ALM G++QNGN      LF +M    ++ PNE+ +
Sbjct: 68  VKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVI 127

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           +T I +      VE G Q HG  +KSG E++  V N++I +YSKC  +  A ++   +P 
Sbjct: 128 ATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPG 186

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
             +  +N ++ G +   +  + + + + +   G   +  T+ +  + C SL  +  G Q+
Sbjct: 187 NDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQV 246

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  ++ S     V   I  S++D Y KCG ++  R  FD ++ ++V+SW+S+I  Y Q E
Sbjct: 247 HAQMLKSDIDCDV--YIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNE 304

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSV 354
              EA+ LF ++    +  + + ++ +    A  + +  G Q+HA A K  SGL  +  V
Sbjct: 305 FFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEK--SGLKGNVMV 362

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+++ MY K G I  A  +F+ M   N++TW  IITG+  HGL KEA+ +F+ M+    
Sbjct: 363 GNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGE 422

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            P+ V ++ V+ AC+H  LV+E   YF+ L    R+ P +EHY+CIV  L R+GRLDEA+
Sbjct: 423 RPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAE 482

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           N + S  +   +  W+TLL+AC VH   + GR++ E LL+L+  +   Y+++SN+HA   
Sbjct: 483 NFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVR 542

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W+    +RKL R + +KK  G SW+E+    H F   D  HP    I++ + ++  +++
Sbjct: 543 RWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIR 602

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
             LG+V  +   LHDI++E K ++L  HSEKLA+   L++       G  I V KNLR+C
Sbjct: 603 -PLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMK----TPSGAPITVIKNLRMC 657

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  IK +SK+   V VVRDA RFH F+ G CSCGDYW
Sbjct: 658 DDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/662 (36%), Positives = 377/662 (56%), Gaps = 8/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH   ++   S      + +I +Y     ++ A  VF  +    V++W +++  F    
Sbjct: 26  QLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L+ F +M +S   P+     + +K+  ++  +  G  +HG  ++ G + +   GN
Sbjct: 85  LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++++MYSK   I+   ++F++MP K ++++N +IAGY  +G  +  L + R+M      P
Sbjct: 145 ALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKP 204

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT +S L        V  G +IHG++I  G    V   I  SLVD Y K   + ++ R
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDV--YIGSSLVDMYAKSARIEDSER 262

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF  + ++  ISW+SL+ GY Q     EA+ LFRQ+    ++      SS++   A  A 
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  GKQ+H Y  +   G +  +++++VDMY KCG I  A ++F+ M + + V+WT II G
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG   EAV LF +M    V+P+ VA++AVL+ACSH GLV+E+  YF+ +     +  
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 442

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +EHY+ + D LGRAG+L+EA + I  M V+P+ ++W TLLS+C VH +LEL  +V E +
Sbjct: 443 ELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 502

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             +D +N   YV+M N++A  G W E  +LR   R KGL+K    SW+E+  + H F  G
Sbjct: 503 FTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSG 562

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP  ++I++ L  + ++M++E G+V      LHD+ EE K E L  HSE+LA+   +
Sbjct: 563 DRSHPSMDRINEFLKAVMEQMEKE-GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 621

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    N +PG  IRV KN+R+C DCH  IK +SKI +   +VRD +RFH F  G CSCGD
Sbjct: 622 I----NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGD 677

Query: 693 YW 694
           YW
Sbjct: 678 YW 679



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 233/421 (55%), Gaps = 7/421 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+  + L +G  +HG +V++G   DL   N L++MY+K   ++    VF+ M  ++V
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDV 171

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+  ++ G+ Q+G  +  L +  +MG+S +KP+ FTLS+ +        V  G +IHG 
Sbjct: 172 VSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGY 231

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ G + +  +G+S++DMY+K  RI ++ R+F  +  +  I+WN+++AGYV  G  ++ 
Sbjct: 232 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEA 291

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LFR+M      P    F+S + AC  L ++  G Q+HG+++  GF  ++   IA +LV
Sbjct: 292 LRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNI--FIASALV 349

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  AR++FD +     +SW+++I+G+A   +  EA+ LF +++ + ++ +  
Sbjct: 350 DMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 409

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
              +++   +   LV++         KV  GL+  + +  ++ D+  + G ++EA +  +
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKV-YGLNQELEHYAAVADLLGRAGKLEEAYDFIS 468

Query: 377 EMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +M V+     W+ +++    H   + A  +  K+   D E  G AY+ + +  + +G  +
Sbjct: 469 KMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMG-AYVLMCNMYASNGRWK 527

Query: 436 E 436
           E
Sbjct: 528 E 528



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           Q KQ+HA   +  S   TS S  ++ +Y    L+ EA  +F  +    V+ W  +I  + 
Sbjct: 23  QAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
              L   A+  F +M      PD   + +VL +C+
Sbjct: 82  DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCT 116


>gi|255551082|ref|XP_002516589.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544409|gb|EEF45930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 367

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/337 (66%), Positives = 265/337 (78%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           MG S VKPNEFT S N+KAS +L+    GMQIH  C KSG +   VV NSI+DMYSKCGR
Sbjct: 1   MGLSGVKPNEFTFSMNLKASSMLNRPYIGMQIHANCTKSGNDIVIVVANSIVDMYSKCGR 60

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           I EAA MFD MP ++LI+WN+MI+GY +AG+ +K ++LFR+M E G+ PDEFT TS LKA
Sbjct: 61  IKEAACMFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALKA 120

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  L +V  G+QIH FLI SGFPY +KT IAG+L+D YVKCG L EA+RVF  IE+K+VI
Sbjct: 121 CSDLAAVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKNVI 180

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           S+S+L LGYA   NLA+AM LFR+ RE  ++ DGFVLSSM+GVFADFALVEQGKQ+HAY+
Sbjct: 181 SFSALFLGYAHGGNLADAMSLFRRFRESDVEADGFVLSSMIGVFADFALVEQGKQMHAYS 240

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            KVPSG D SV NSIVDMYLKCG+IDEA   F EM  ++V++WTV+ITGYGKHGL KEAV
Sbjct: 241 IKVPSGSDLSVCNSIVDMYLKCGVIDEAERFFAEMSTRDVISWTVMITGYGKHGLGKEAV 300

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
            LF KM  DD+EPD V YLAVL ACSHSGLVEE Q Y
Sbjct: 301 CLFNKMQSDDIEPDDVTYLAVLLACSHSGLVEEGQWY 337



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 4/309 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q+H    K G    +++ N ++DMY+KCG +  A  +FD M  RN++SW +++ G+  
Sbjct: 29  GMQIHANCTKSGNDIVIVVANSIVDMYSKCGRIKEAACMFDFMPVRNLISWNSMISGYSI 88

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW--NP 148
            G  +  + LF +M     +P+EFTL++ +KA   L++V  G QIH   + SGF +    
Sbjct: 89  AGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSDLAAVREGSQIHSFLIISGFPYLIKT 148

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            +  ++ID Y KCG++ EA R+F  +  K++I+++A+  GY   G     + LFR+ +E 
Sbjct: 149 SIAGALIDQYVKCGKLCEAQRVFSQIEEKNVISFSALFLGYAHGGNLADAMSLFRRFRES 208

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               D F  +S +        V  G Q+H + I    P      +  S+VD Y+KCG + 
Sbjct: 209 DVEADGFVLSSMIGVFADFALVEQGKQMHAYSIK--VPSGSDLSVCNSIVDMYLKCGVID 266

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA R F  +  + VISW+ +I GY +     EA+ LF +++   ++ D     +++   +
Sbjct: 267 EAERFFAEMSTRDVISWTVMITGYGKHGLGKEAVCLFNKMQSDDIEPDDVTYLAVLLACS 326

Query: 329 DFALVEQGK 337
              LVE+G+
Sbjct: 327 HSGLVEEGQ 335



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 120/233 (51%), Gaps = 2/233 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVFDK 72
           L  +L+ CS    +  G Q+H  L+  GF +     +   LID Y KCG++  A  VF +
Sbjct: 114 LTSALKACSDLAAVREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQ 173

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           + E+NV+S++AL  G+   GN    +SLF +   S V+ + F LS+ I      + VE G
Sbjct: 174 IEEKNVISFSALFLGYAHGGNLADAMSLFRRFRESDVEADGFVLSSMIGVFADFALVEQG 233

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+H   +K     +  V NSI+DMY KCG I+EA R F  M  + +I+W  MI GY   
Sbjct: 234 KQMHAYSIKVPSGSDLSVCNSIVDMYLKCGVIDEAERFFAEMSTRDVISWTVMITGYGKH 293

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           G   + + LF KMQ     PD+ T+ + L AC   G V  G     F+  + F
Sbjct: 294 GLGKEAVCLFNKMQSDDIEPDDVTYLAVLLACSHSGLVEEGQWYLQFMPRNWF 346



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 5/161 (3%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G QIHA   K  + +   V+NSIVDMY KCG I EA  +F+ MPV+N+++W  +I+GY  
Sbjct: 29  GMQIHANCTKSGNDIVIVVANSIVDMYSKCGRIKEAACMFDFMPVRNLISWNSMISGYSI 88

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND---KRMKP 452
            G  ++AV LFR+ML D  EPD     + L ACS    V E  +  S L        +K 
Sbjct: 89  AGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSDLAAVREGSQIHSFLIISGFPYLIKT 148

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            I     ++D   + G+L EA+ +   +  K  I+     L
Sbjct: 149 SIA--GALIDQYVKCGKLCEAQRVFSQIEEKNVISFSALFL 187


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 396/686 (57%), Gaps = 16/686 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   +  G  +HG  VK+    +L+LNN L+DMY+KCG +  A  +F    
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
            +NVVSW  ++ GF   G+      +  QM  G   VK +E T+   +      S + + 
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            ++H   +K  F +N +V N+ +  Y+KCG ++ A R+F  + +K++ +WNA+I G+  +
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
                 L    +M+  G +PD FT  S L AC  L S+  G ++HGF+I +     +   
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  S++  Y+ CG L   + +FD +E KS++SW+++I GY Q      A+ +FRQ+    
Sbjct: 535 L--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592

Query: 313 LQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
           +Q+ G    SMM VF   +L+     G++ HAYA K     D  ++ S++DMY K G I 
Sbjct: 593 IQLCGI---SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +++++FN +  K+  +W  +I GYG HGLAKEA+ LF +M      PD + +L VL+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAI 488
           HSGL+ E   Y  ++ +   +KP ++HY+C++D LGRAG+LD+A  ++ E M  +  + I
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W++LLS+CR+H +LE+G +V   L  L+ + P NYV++SN++A  G W +  ++R+    
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
             L+K AG SW+E+++++  F  G+      E+I  +   +E ++  ++G+        H
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS-KMGYRPDTMSVQH 888

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D+ EE K E LR HSEKLA+   L++       G  IRV+KNLR+C DCH   K +SK++
Sbjct: 889 DLSEEEKIEQLRGHSEKLALTYGLIK----TSEGTTIRVYKNLRICVDCHNAAKLISKVM 944

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           +   VVRD  RFH F+ GVCSCGDYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 207/391 (52%), Gaps = 9/391 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +L   +I MYA CG  + +  VFD +  +N+  W A++  + +N      L  F +M 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178

Query: 106 SSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
           S++ + P+ FT    IKA   +S V  G+ +HG+ +K+G   +  VGN+++  Y   G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF-RKMQEHGE---IPDEFTFTST 220
            +A ++FD+MP ++L++WN+MI  +   G+S++  LL    M+E+G+   +PD  T  + 
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L  C     +G G  +HG+ +        + V+  +L+D Y KCGC+  A+ +F +   K
Sbjct: 299 LPVCAREREIGLGKGVHGWAVK--LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           +V+SW++++ G++ E +     ++ RQ+      ++ D   + + + V    + +   K+
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +H Y+ K     +  V+N+ V  Y KCG +  A  +F+ +  K V +W  +I G+ +   
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            + ++    +M +  + PD     ++LSACS
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/663 (36%), Positives = 385/663 (58%), Gaps = 44/663 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  LV  G    + ++  L+++YA  G+++ +   FD++ +++V +W +++  ++ NG+
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97

Query: 94  AKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               +  F Q+   S ++P+ +T    +KA G L    +G +IH    K GF+WN  V  
Sbjct: 98  FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAA 154

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I MYS+ G    A  +FD MP + + +WNAMI+G +  G + + L +  +M+  G   
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  T  S L                                    VD Y K G L  A +
Sbjct: 215 NFVTVVSILPV---------------------------------FVDMYAKLGLLDSAHK 241

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDGFVLSSMMGVFADFA 331
           VF++I  K VISW++LI GYAQ    +EA+E+++ + E + +  +     S++  +A   
Sbjct: 242 VFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 301

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            ++QG +IH    K    LD  V+  ++D+Y KCG + +A  LF ++P ++ VTW  II+
Sbjct: 302 ALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            +G HG A++ + LF +ML + V+PD V ++++LSACSHSG VEE +  F RL  +  +K
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIK 420

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P ++HY C+VD LGRAG L+ A + I+ MP++P  +IW  LL ACR+HG++ELG+   + 
Sbjct: 421 PSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 480

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L  +D  N   YV++SNI+A+ G W   +++R LAR +GLKK  G S +EV++++  FY 
Sbjct: 481 LFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYT 540

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           G+ +HP  ++I++ L  +  +MK  LG++    + L D++E+ KE  L  HSE+LAI   
Sbjct: 541 GNQSHPKCKEIYEELRVLTAKMK-SLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFG 599

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           ++    +  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+ RFH F+ G+CSCG
Sbjct: 600 II----STPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCG 655

Query: 692 DYW 694
           DYW
Sbjct: 656 DYW 658



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 44/412 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    L+D G ++H    K+GF +++ +   LI MY++ G    A ++FD M  R++
Sbjct: 125 LKACGT--LVD-GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDM 181

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW A++ G +QNGNA   L +  +M    +K N  T+ + +                  
Sbjct: 182 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL------------------ 223

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                    PV     +DMY+K G ++ A ++F+++P K +I+WN +I GY   G + + 
Sbjct: 224 ---------PV----FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 270

Query: 199 LLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           + +++ M+E  E IP++ T+ S L A   +G++  G +IHG +I +     V   +A  L
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDV--FVATCL 328

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG LV+A  +F  + Q+S ++W+++I  +    +  + ++LF ++ +  ++ D 
Sbjct: 329 IDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDH 388

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
               S++   +    VE+GK    +      G+  S+ +   +VD+  + G ++ A +  
Sbjct: 389 VTFVSLLSACSHSGFVEEGKW--CFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFI 446

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +MP++ +   W  ++     HG  +  +G F    L +V+   V Y  +LS
Sbjct: 447 KDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSKNVGYYVLLS 496


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 402/760 (52%), Gaps = 102/760 (13%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  ++K G    + L N+L+  YAK G +  A  VFD+M  ++  SW  L+ G+ +
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 91  NGNAKA-------------------------------CLSLFCQMGSSSVKPNEFTLSTN 119
            GN +                                 + +F +M S  V P++FT+S  
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG----------------- 162
           + +     +++ G +IH   +K G      V  S+++MY+KCG                 
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 163 --------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QE 207
                         +   AA  F+ MP + +++WN+MI+GY   GY+ + L +F KM  E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-----TSGF----------------- 245
               PD FT  S L AC +L  +  G QIH +++     TSG                  
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 246 ---------PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
                      ++  +   SL+D Y K G +  AR +F+ +  + V++W+++I+GY Q  
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A+ELFR +     + + + L++M+ V +   ++E GKQIHA A K       SV+N
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448

Query: 357 SIVDMYLKCGLIDEATELFNEMP--VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           +++ MY K G I+ A  +F ++P   K +V+WT +I    +HGL KEA+ LF +ML   +
Sbjct: 449 ALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +PD + Y+ VLSAC+H GLVE+ ++Y++ +     ++P + HY+C++D  GRAG L EA 
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             IESMP++P    W +LL++C++H + +L +   E LL +D  N   Y+ ++N+++  G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W    + RKL + +G++K  G SW+ +  E+H F   D  HP  ++I++++ E+ + +K
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
            ++GF+   +  LHD++EE KE+ L+ HSEKLAI   L    LN      +R+ KNLRVC
Sbjct: 688 -KMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGL----LNTPENTALRIMKNLRVC 742

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  IK +SK++    +VRDATRFH F+ G CSC DYW
Sbjct: 743 NDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 232/499 (46%), Gaps = 83/499 (16%)

Query: 8   LVSERQ-----RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           ++SER       +++ L  C+ N  LD G ++H  +VK+G    + +   L++MYAKCG+
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 63  MNGACAVFD-------------------------------KMLERNVVSWTALMCGFLQN 91
              A  VFD                               KM +R++VSW +++ G+ Q 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 92  GNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           G     L++F +M    S+KP+ FTL++ + A   L  +  G QIH   +++  E +  V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312

Query: 151 GNSIIDMYSKCGRINEAARMF-------------------------DVMPAKSL------ 179
           GN++I MY+K G + E AR+                          +V PA+ +      
Sbjct: 313 GNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 180 ---ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
              + W AMI GYV  G  +  L LFR M   G  P+ +T  + L    SL  +  G QI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQE 295
           H   I +G   S    +  +L+  Y K G +  A+RVFDL   +K ++SW+S+I+  AQ 
Sbjct: 432 HASAIKAG--ESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQH 489

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               EA+ LF ++    ++ D      ++       LVEQG++ +    +V   ++ ++S
Sbjct: 490 GLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE-IEPTLS 548

Query: 356 N--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
           +   ++D+Y + GL+ EA      MP++ + + W  ++     H  A  A     ++LL 
Sbjct: 549 HYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLI 608

Query: 413 DVEPDGVAYLA---VLSAC 428
           D    G AYLA   V SAC
Sbjct: 609 DPGNSG-AYLALANVYSAC 626



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 52/351 (14%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------ 60
           SL  +   LA  L  C+    L+ G Q+H  +++        + N LI MYAK       
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 61  ---------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
                                      G +  A  +F+K+ +R+VV+WTA++ G++QNG 
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L LF  M +   +PN +TL+  +  S  L+ +E+G QIH   +K+G    P V N+
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 154 IIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           +I MY+K G IN A R+FD +P   K +++W +MI      G   + + LF +M   G  
Sbjct: 450 LIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMK 508

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVE 269
           PD  T+   L AC  +G V  G + +  +      + ++  ++    ++D Y + G L E
Sbjct: 509 PDHITYVGVLSACTHVGLVEQGRKYYNMMTEV---HEIEPTLSHYACMIDLYGRAGLLQE 565

Query: 270 ARRVFDLIEQKSV----ISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           A   +  IE   +    I+W SL+      +N     +L +   ER L +D
Sbjct: 566 A---YLFIESMPIEPDNIAWGSLLASCKIHKN----ADLAKVAAERLLLID 609


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 396/686 (57%), Gaps = 16/686 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   +  G  +HG  VK+    +L+LNN L+DMY+KCG +  A  +F    
Sbjct: 45  LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 104

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
            +NVVSW  ++ GF   G+      +  QM  G   VK +E T+   +      S + + 
Sbjct: 105 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 164

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            ++H   +K  F +N +V N+ +  Y+KCG ++ A R+F  + +K++ +WNA+I G+  +
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
                 L    +M+  G +PD FT  S L AC  L S+  G ++HGF+I +     +   
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 284

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  S++  Y+ CG L   + +FD +E KS++SW+++I GY Q      A+ +FRQ+    
Sbjct: 285 L--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 342

Query: 313 LQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
           +Q+ G    SMM VF   +L+     G++ HAYA K     D  ++ S++DMY K G I 
Sbjct: 343 IQLCGI---SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +++++FN +  K+  +W  +I GYG HGLAKEA+ LF +M      PD + +L VL+AC+
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 459

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAI 488
           HSGL+ E   Y  ++ +   +KP ++HY+C++D LGRAG+LD+A  ++ E M  +  + I
Sbjct: 460 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 519

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W++LLS+CR+H +LE+G +V   L  L+ + P NYV++SN++A  G W +  ++R+    
Sbjct: 520 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 579

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
             L+K AG SW+E+++++  F  G+      E+I  +   +E ++  ++G+        H
Sbjct: 580 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS-KMGYRPDTMSVQH 638

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D+ EE K E LR HSEKLA+   L++       G  IRV+KNLR+C DCH   K +SK++
Sbjct: 639 DLSEEEKIEQLRGHSEKLALTYGLIK----TSEGTTIRVYKNLRICVDCHNAAKLISKVM 694

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           +   VVRD  RFH F+ GVCSCGDYW
Sbjct: 695 EREIVVRDNKRFHHFKNGVCSCGDYW 720



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 236/493 (47%), Gaps = 28/493 (5%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQM----GSSSVKPNEFTLSTNIKASGVLSSVEN 131
           RN VSW +++  F  NG ++    L  +M    G  +  P+  TL T +        +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  +HG  +K   +   V+ N+++DMYSKCG I  A  +F +   K++++WN M+ G+  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 192 AGYSDKGLLLFRKMQEHGE--IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
            G +     + R+M   GE    DE T  + +  C     +    ++H + +   F Y+ 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN- 179

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
             ++A + V  Y KCG L  A+RVF  I  K+V SW++LI G+AQ  +   +++   Q++
Sbjct: 180 -ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              L  D F + S++   +    +  GK++H +  +     D  V  S++ +Y+ CG + 
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
               LF+ M  K++V+W  +ITGY ++G    A+G+FR+M+L  ++  G++ + V  ACS
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 430 ---HSGLVEESQEY-FSRLCNDKRMKPRIEHYSC-IVDSLGRAGRLDEAKNLIESMPVKP 484
                 L  E+  Y    L  D          +C ++D   + G + ++  +   +  K 
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAF------IACSLIDMYAKNGSITQSSKVFNGLKEK- 411

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           S A W  ++    +HG   L +E  ++   ++  G NP +   +  + A   S    E L
Sbjct: 412 STASWNAMIMGYGIHG---LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 468

Query: 543 RKLARSK---GLK 552
           R L + K   GLK
Sbjct: 469 RYLDQMKSSFGLK 481


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 388/670 (57%), Gaps = 15/670 (2%)

Query: 31   GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++H  L++ G  +  + + N LI+MYAKCG +N AC VF  M  ++ V+W +++ G  
Sbjct: 407  GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLD 466

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            QN      +  F +M  + + P+ FT+ + + +   L  +  G Q+H   +K G + +  
Sbjct: 467  QNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVS 526

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD-KGLLLFRKMQEH 208
            V N+++ +Y +CG + E  + F +M     ++WN++I     +  S  + +  F  M   
Sbjct: 527  VSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRA 586

Query: 209  GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            G  P+  TF + L A  SL     G QIH  ++      +  T I  +L+  Y KCG + 
Sbjct: 587  GWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNV--AADTAIENALLACYGKCGDMG 644

Query: 269  EARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
                +F  + +++  +SW+S+I GY   E L +AM++   + ++  ++DGF  ++++   
Sbjct: 645  YCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSAC 704

Query: 328  ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
            A  A +E+G ++H  + +     D  + +++VDMY KCG ID A+  F  MP +N+ +W 
Sbjct: 705  ATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWN 764

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
             +I+GY +HG   +++ LF +M L    PD V ++ VLSACSH+GLV E   +F  +   
Sbjct: 765  SMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEI 824

Query: 448  KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-DLELG 505
              + PR+EH+SC+VD LGR G L++ ++ +  MPVKP++ IW+T+L A CR +G +  LG
Sbjct: 825  YGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALG 884

Query: 506  REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
            R   E+LL ++  N VNY+++SN++A  G W++  + R   R   +KK AG SWV +   
Sbjct: 885  RRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDG 944

Query: 566  IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
            +H F  GD +HP  + I++ L E+  +M+   G++   ++AL+D++ ESKEE L  HSEK
Sbjct: 945  VHVFVAGDKSHPEKDLIYEKLKELNGKMRLA-GYIPETRFALYDLEGESKEELLSYHSEK 1003

Query: 626  LAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
            +A+   L R      P K+ IR+ KNLRVCGDCH   K +S+I++   V+RD+ RFH FE
Sbjct: 1004 IAVAFVLTR------PSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFE 1057

Query: 685  GGVCSCGDYW 694
             G CSCGD+W
Sbjct: 1058 NGKCSCGDFW 1067



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 234/479 (48%), Gaps = 20/479 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QL   + K GF  DL + + L+  +AK G +  A  +F KM  RNVVS   L+ G ++  
Sbjct: 305 QLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQK 364

Query: 93  NAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGM----QIHGMCMKSG-FEW 146
             +  + LF +M  S  + PN + +   + A      +ENG     ++H   ++SG    
Sbjct: 365 RGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNA 422

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              +GN +I+MY+KCG IN+A  +F +M  K  +TWN+MI G        + +  F++M+
Sbjct: 423 QIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMR 482

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
                P  FT  S L +C SLG +  G Q+H   +  G    V   ++ +L+  Y +CG 
Sbjct: 483 RTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVS--VSNALLALYGECGY 540

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEE-NLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           + E ++ F L+     +SW+SLI   A  E ++ EA+E F  +       +     +++ 
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILA 600

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVV 384
             +  +L E GKQIHA   K     DT++ N+++  Y KCG +     +F+ M  + + V
Sbjct: 601 AVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS-- 442
           +W  +I+GY  + L  +A+ +   M+      DG  +  VLSAC+    +E   E     
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720

Query: 443 -RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            R C    ++  I   S +VD   + GR+D A    E MP + ++  W +++S    HG
Sbjct: 721 VRAC----LESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSWNSMISGYARHG 774



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 227/423 (53%), Gaps = 21/423 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  L K GF  DL L N LI++YA+ G++     VFD+M  RN+VSW+ L+ G+ +N 
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVV 150
                  LF +M S    PN +   + I+A        ++ GMQIHG+  K+ +  +   
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 151 GNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
            N +I MY    G ++ A R FD +  ++L++ N+MI+ Y   G +     +F  MQ+  
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 209 ---GEIPDEFTFTSTLKACGSLGSVGGG--TQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
              G  P+E+TF S + A  SL + G     Q+   +  SGF + +   +  +LV  + K
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDL--YVGSALVSGFAK 331

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            G +  A+ +F  +  ++V+S + LI+G  +++   EA+ELF ++++ S++++      +
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD-SVELNPNSYMII 390

Query: 324 MGVFADFALVEQGK----QIHAYAAKVPSGL---DTSVSNSIVDMYLKCGLIDEATELFN 376
           +  F +F ++E GK    ++HA+  +  SGL     ++ N +++MY KCG I++A  +F 
Sbjct: 391 LTAFPEFHVLENGKRKGSEVHAFLIR--SGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+ VTW  +ITG  ++    EAV  F++M   ++ P     ++ LS+C+  G +  
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508

Query: 437 SQE 439
            ++
Sbjct: 509 GEQ 511



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 247/492 (50%), Gaps = 26/492 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERNVVSWTALMC 86
           L +G+Q+HG + K  +  D+  +N LI MY    G ++ A   FD +  RN+VS  +++ 
Sbjct: 192 LKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMIS 251

Query: 87  GFLQNGNAKACLSLFCQMGS----SSVKPNEFTLSTNIKASGVLSSVENGM----QIHGM 138
            + Q G+A +   +F  M        +KPNE+T  + I A+  L++  +G+    Q+   
Sbjct: 252 VYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN--SGLVLLEQLLTR 309

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             KSGF  +  VG++++  ++K G I  A  +F  M  +++++ N +I G V     ++ 
Sbjct: 310 VEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEA 369

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVG--GGTQIHGFLITSGFPYSVKTVIAG 255
           + LF +M++  E+ P+ +    T      +   G   G+++H FLI SG   + +  I  
Sbjct: 370 VELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGL-LNAQIAIGN 428

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            L++ Y KCG + +A  VF L++ K  ++W+S+I G  Q +   EA++ F+++R   L  
Sbjct: 429 GLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYP 488

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
             F + S +   A    +  G+Q+H    K+   LD SVSN+++ +Y +CG + E  + F
Sbjct: 489 SNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAF 548

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAK-EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           + M   + V+W  +I        +  EAV  F  M+    +P+ V ++ +L+A S   L 
Sbjct: 549 SLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLH 608

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQ 490
           E  ++  + +     +K  +   + I ++L    G+ G +   +N+   M  +     W 
Sbjct: 609 ELGKQIHALV-----LKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWN 663

Query: 491 TLLSACRVHGDL 502
           +++S   +H +L
Sbjct: 664 SMISG-YIHNEL 674



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 206/424 (48%), Gaps = 10/424 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  +L  C+    +  G QLH   +K+G   D+ ++N L+ +Y +CG +      F  ML
Sbjct: 493 MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552

Query: 75  ERNVVSWTALMCGFLQNGNAK--ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           + + VSW +L+ G L +        +  F  M  +   PN  T  T + A   LS  E G
Sbjct: 553 DYDHVSWNSLI-GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG 611

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
            QIH + +K     +  + N+++  Y KCG +     +F  M  +   ++WN+MI+GY+ 
Sbjct: 612 KQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIH 671

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                K + +   M + G+  D FTF + L AC ++ ++  G ++HG  + +     +  
Sbjct: 672 NELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDI-- 729

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           VI  +LVD Y KCG +  A R F+++  +++ SW+S+I GYA+  +  ++++LF Q++ +
Sbjct: 730 VIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQ 789

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLID 369
               D      ++   +   LV +G   H  +     GL   + +   +VD+  + G ++
Sbjct: 790 GPLPDHVTFVGVLSACSHAGLVNEGFS-HFDSMSEIYGLAPRMEHFSCMVDLLGRVGELN 848

Query: 370 EATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +  +  N+MPVK NV+ W  ++    +      A+G     +L ++EP       +LS  
Sbjct: 849 KMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNM 908

Query: 429 SHSG 432
             SG
Sbjct: 909 YASG 912



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 202/416 (48%), Gaps = 24/416 (5%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H    K+GF  +  + N++I++Y++ G +    ++FD MP ++L++W+ +I+GY    
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG--GGTQIHGFLITSGFPYSVKT 251
             ++   LFRKM   G +P+ + F S ++AC   G  G   G QIHG +  S   Y    
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLM--SKTQYVNDV 211

Query: 252 VIAGSLVDFYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +  L+  Y     +V+ ARR FD I  ++++S +S+I  Y Q  +   A ++F  +++
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271

Query: 311 R----SLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMY 362
                 L+ + +   S++   A  +L   G    +Q+     K     D  V +++V  +
Sbjct: 272 EVMGDGLKPNEYTFGSLIS--ATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            K G I  A  +F +M  +NVV+   +I G  +    +EAV LF +M  D VE +  +Y+
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYM 388

Query: 423 AVLSACSHSGLVEESQ----EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
            +L+A     ++E  +    E  + L     +  +I   + +++   + G +++A  +  
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 479 SMPVKPSIAIWQTLLSACRVHGD-LELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
            M  K S+  W ++++    +   LE  +   E  +R     P N+ M+S + + A
Sbjct: 449 LMDNKDSVT-WNSMITGLDQNKQFLEAVKTFQE--MRRTELYPSNFTMISALSSCA 501


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/694 (35%), Positives = 400/694 (57%), Gaps = 18/694 (2%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L  + +     L+ C    ++D G ++H   +K GF +D+ +   LI +Y++   +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRT--VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKA 122
             A  +FD+M  R++ SW A++ G+ Q+GNAK  L+L     S+ ++  +  T+ + + A
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSA 256

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
                    G+ IH   +K G E    V N +ID+Y++ GR+ +  ++FD M  + LI+W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I  Y L     + + LF++M+     PD  T  S       LG +     + GF + 
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G+ +     I  ++V  Y K G +  AR VF+ +    VISW+++I GYAQ    +EA+
Sbjct: 377 KGW-FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435

Query: 303 ELFRQLRER-SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           E++  + E   +  +     S++   +    + QG ++H    K    LD  V  S+ DM
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG +++A  LF ++P  N V W  +I  +G HG  ++AV LF++ML + V+PD + +
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           + +LSACSHSGLV+E Q  F  +  D  + P ++HY C+VD  GRAG+L+ A   I+SM 
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           ++P  +IW  LLSACRVHG+++LG+   E L  ++ ++   +V++SN++A AG W   + 
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDE 675

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R +A  KGL+K  G S +EVD ++  FY G+ THP+ E++++ L  ++ ++K  +G+V 
Sbjct: 676 IRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK-MIGYVP 734

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEF 660
             ++ L D++++ KE  L  HSE+LAI  AL+       P K  IR+FKNLRVCGDCH  
Sbjct: 735 DHRFVLQDVEDDEKEHILMSHSERLAIAFALI-----ATPAKTTIRIFKNLRVCGDCHSV 789

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K +SKI +   +VRD+ RFH F+ GVCSCGDYW
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 245/475 (51%), Gaps = 18/475 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  LV      ++ ++  L+++Y   G +  A   FD +  R+V +W  ++ G+ + GN
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 94  AKA---CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +     C SLF  M SS + P+  T  + +KA     +V +G +IH + +K GF W+  V
Sbjct: 133 SSEVIRCFSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYV 187

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S+I +YS+   +  A  +FD MP + + +WNAMI+GY  +G + + L L   ++    
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D  T  S L AC   G    G  IH + I  G    +   ++  L+D Y + G L + 
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL--FVSNKLIDLYAEFGRLRDC 301

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           ++VFD +  + +ISW+S+I  Y   E    A+ LF+++R   +Q D   L S+  + +  
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361

Query: 331 ALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
             +   + +  +  +    L D ++ N++V MY K GL+D A  +FN +P  +V++W  I
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421

Query: 390 ITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           I+GY ++G A EA+ ++  M  + ++  +   +++VL ACS +G + +  +   RL  + 
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +   +   + + D  G+ GRL++A +L   +P   S+  W TL++    HG  E
Sbjct: 482 -LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGE 534



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           ++   E  EI D  T     + C +L S      +H  L+ S    +V   I+  LV+ Y
Sbjct: 45  WKNGNESKEIDDVHTL---FRYCTNLQS---AKCLHARLVVSKQIQNV--CISAKLVNLY 96

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
              G +  AR  FD I+ + V +W+ +I GY +  N +E +  F      S     +   
Sbjct: 97  CYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY--R 154

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           +   V      V  G +IH  A K     D  V+ S++ +Y +   +  A  LF+EMPV+
Sbjct: 155 TFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214

Query: 382 NVVTWTVIITGYGKHGLAKEAVGL---FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           ++ +W  +I+GY + G AKEA+ L    R M       D V  +++LSAC+ +G      
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGV 267

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
              S       ++  +   + ++D     GRL + + + + M V+  I+ W +++ A
Sbjct: 268 TIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKA 322


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/664 (36%), Positives = 381/664 (57%), Gaps = 34/664 (5%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG L+K+G+ +D    N L+DMYAK G++  A +VF+K+ + ++VSW A++ G + 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + + +  L L  QM                             Q+H   MK   E +  V
Sbjct: 337 HEHHEQALELLGQMKR---------------------------QLHSSLMKMDMESDLFV 369

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
              ++DMYSKC  + +A   F+++P K LI WNA+I+GY       + L LF +M + G 
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 429

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++ T ++ LK+   L  V    Q+HG  + SGF   +  V   SL+D Y KC  + +A
Sbjct: 430 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVV--NSLIDSYGKCSHVEDA 487

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F+      ++S++S+I  YAQ     EA++LF ++++  L+ D FV SS++   A+ 
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           +  EQGKQ+H +  K    LD    NS+V+MY KCG ID+A   F+E+  + +V+W+ +I
Sbjct: 548 SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMI 607

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G  +HG  ++A+ LF +ML + V P+ +  ++VL AC+H+GLV E++ YF  +      
Sbjct: 608 GGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 667

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           KP  EHY+C++D LGRAG+++EA  L+  MP + + ++W  LL A R+H D+ELGR   E
Sbjct: 668 KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 727

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           +L  L+ +    +V+++NI+A AG W     +R+L R   +KK  G SW+EV  +++ F 
Sbjct: 728 MLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFL 787

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +H  +++I+  L E+   M ++ G+V  V+  LHD+++  KE  L  HSEKLA+  
Sbjct: 788 VGDRSHYRSQEIYAKLDELSDLM-DKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 846

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+        G  IRV KNLRVC DCH   K + KI+    +VRD  RFH F+ G CSC
Sbjct: 847 GLIA----TPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSC 902

Query: 691 GDYW 694
           GDYW
Sbjct: 903 GDYW 906



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 264/504 (52%), Gaps = 42/504 (8%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           +CC+   L   G+Q+H  + K G S D  + N LI++Y+KC     A  + D+  E ++V
Sbjct: 65  QCCTTKSLRP-GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLV 123

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           SW+AL+ G+ QNG     L  F +M    VK NEFT S+ +KA  ++  +  G Q+HG+ 
Sbjct: 124 SWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV 183

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           + SGFE +  V N+++ MY+KC    ++ R+FD +P +++++WNA+ + YV   +  + +
Sbjct: 184 VVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAV 243

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF---PYSVKTVIAGS 256
            LF +M   G  P+EF+ +S + AC  L     G  IHG+LI  G+   P+S     A +
Sbjct: 244 GLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS-----ANA 298

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y K G L +A  VF+ I+Q  ++SW+++I G    E+  +A+EL  Q++       
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------- 351

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                               +Q+H+   K+    D  VS  +VDMY KC L+++A   FN
Sbjct: 352 --------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFN 391

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +P K+++ W  II+GY ++    EA+ LF +M  + +  +      +L + +   +V  
Sbjct: 392 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 451

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++    L         I   + ++DS G+   +++A+ + E   +   ++ + ++++A 
Sbjct: 452 CRQVHG-LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVS-FTSMITAY 509

Query: 497 RVHGD----LELGREVGEILLRLD 516
             +G     L+L  E+ ++ L+ D
Sbjct: 510 AQYGQGEEALKLFLEMQDMELKPD 533



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 263/520 (50%), Gaps = 54/520 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  G Q+HG +V  GF  D+ + N L+ MYAKC E   +  +FD++ ERNV
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW AL   ++Q       + LF +M  S +KPNEF+LS+ + A   L     G  IHG 
Sbjct: 224 VSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGY 283

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G++W+P   N+++DMY+K G + +A  +F+ +    +++WNA+IAG VL  + ++ 
Sbjct: 284 LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L  +M+                            Q+H  L+       +   ++  LV
Sbjct: 344 LELLGQMKR---------------------------QLHSSLMKMDMESDL--FVSVGLV 374

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  L +AR  F+L+ +K +I+W+++I GY+Q     EA+ LF ++ +  +  +  
Sbjct: 375 DMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQT 434

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            LS+++   A   +V   +Q+H  + K     D  V NS++D Y KC  +++A  +F E 
Sbjct: 435 TLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC 494

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            + ++V++T +IT Y ++G  +EA+ LF +M   +++PD     ++L+AC++    E+  
Sbjct: 495 TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG- 553

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSL---------GRAGRLDEAKNLIESMPVKPSIAIW 489
                    K++   I  Y  ++D            + G +D+A      +  +  I  W
Sbjct: 554 ---------KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSW 603

Query: 490 QTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMS 527
             ++     HG    GR+  ++  ++  +G +P +  ++S
Sbjct: 604 SAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNHITLVS 640



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 187/365 (51%), Gaps = 13/365 (3%)

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F ++    A L+L   +   +  P   + S  +       S+  G+QIH    KSG   +
Sbjct: 34  FSEDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P + N +I++YSKC     A ++ D      L++W+A+I+GY   G     L+ F +M  
Sbjct: 91  PSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G   +EFTF+S LKAC  +  +  G Q+HG ++ SGF   V   +A +LV  Y KC   
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV--FVANTLVVMYAKCDEF 208

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           ++++R+FD I +++V+SW++L   Y Q +   EA+ LF ++    ++ + F LSSM+   
Sbjct: 209 LDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC 268

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                  +GK IH Y  K+    D   +N++VDMY K G + +A  +F ++   ++V+W 
Sbjct: 269 TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWN 328

Query: 388 VIITG---YGKHGLAKEAVGLFRKMLLD-----DVEPDGVAYLAVLSACSHSGLVEESQE 439
            +I G   +  H  A E +G  ++ L       D+E D    + ++   S   L+E+++ 
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 388

Query: 440 YFSRL 444
            F+ L
Sbjct: 389 AFNLL 393



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 4/173 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+     + G QLH  ++K GF  D+   N L++MYAKCG ++ A   F ++ ER +
Sbjct: 541 LNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+A++ G  Q+G+ +  L LF QM    V PN  TL + + A      V    +++  
Sbjct: 601 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA-KLYFE 659

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
            M+  F + P+  +   +ID+  + G+INEA  + + MP ++  + W A++  
Sbjct: 660 SMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGA 712


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/666 (34%), Positives = 382/666 (57%), Gaps = 12/666 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q+H  +++ GFS  L++ N L+D Y K   ++ A  +F +M  ++ VS+  ++ G+ + 
Sbjct: 163 LQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY 222

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G  +  L LF QM +   +P+ FT +  +  S     V  G QIHG+ +K+ + W+  V 
Sbjct: 223 GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVA 282

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++D YSK   I+ A  +FD MP    +++N +I GY   G  +K   LF+++Q     
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFD 342

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
              F F + L       ++  G Q H   + +     V+  +  +LVD Y KC    +A 
Sbjct: 343 RKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQ--VGNALVDMYAKCEKFEDAN 400

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           R+F  +  ++ + W+++I  Y Q+    EA+++F+++   ++  D    +S +   A+ A
Sbjct: 401 RIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLA 460

Query: 332 LVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            V  GKQ+H+   ++  GL +SV   + +VDMY  CG + +A E+F EMP +N+V W  +
Sbjct: 461 SVSLGKQLHSSVIRL--GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNAL 518

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y ++G A+     F  M+   + PD V++L+VL+ACSH GLVE++  YF+ +    +
Sbjct: 519 ISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYK 578

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + PR +HY+ ++D L R+GR +EA+NLI  MP +P   +W ++L++CR+H + +L ++  
Sbjct: 579 LDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAA 638

Query: 510 EILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
           + L ++D   +   YV MSNI+A+AG W    +++K  R +G+KKV   SWVE+D  +H 
Sbjct: 639 DQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHV 698

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D THP TE+I + +  + + M +E G+       L ++ EE K ESL+ HSE+LAI
Sbjct: 699 FTANDRTHPQTEQIRRKINSLVELMDKE-GYKPDTSCTLQNVDEEMKIESLKYHSERLAI 757

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
             AL+    N   G  I + KNLR C DCH  IK +SKI+     VRD++RFH F  G C
Sbjct: 758 AFALI----NTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSC 813

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 814 SCGDYW 819



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 234/453 (51%), Gaps = 4/453 (0%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y K   +  A  +F+ M  RN VSWT ++ G+ QN   K   +L+ +M  S VK
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P+  T +T +      ++++  +QIH   ++ GF  + +V NS++D Y K   ++ A+++
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  MP K  +++N MI GY   G+ ++ L LF +M+     P  FTF + L        V
Sbjct: 201 FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G QIHG  I + + + +   +A +L+DFY K   +  A+ +FD + +   +S++ +I 
Sbjct: 261 IFGQQIHGLAIKTSYVWDI--FVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYA      ++ +LF++L+  S     F  ++M+ V A    +  G+Q HA A    +  
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +  V N++VDMY KC   ++A  +F  +  +N V WT II+ Y + G  +EA+ +F++M 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
            ++V  D   + + L A ++   V   ++  S +     +   +   S +VD     G +
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSS-VFSGSVLVDMYANCGSM 497

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +A  + + MP + +I  W  L+SA   +GD E
Sbjct: 498 KDAIEVFKEMPDR-NIVCWNALISAYSQNGDAE 529



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 209/415 (50%), Gaps = 14/415 (3%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q+HG  +K  + +D+ + N L+D Y+K   ++ A  +FD+M E + VS+  ++ G+ 
Sbjct: 262 FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYA 321

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG  +    LF ++  +S     F  +T +  + +  ++  G Q H   + +       
Sbjct: 322 WNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQ 381

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VGN+++DMY+KC +  +A R+F  +  ++ + W A+I+ YV  G+ ++ L +F++M    
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNREN 441

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLV 268
              D+ TF STLKA  +L SV  G Q+H  +I  G    + +V +GS LVD Y  CG + 
Sbjct: 442 VHGDQATFASTLKASANLASVSLGKQLHSSVIRLGL---LSSVFSGSVLVDMYANCGSMK 498

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A  VF  +  ++++ W++LI  Y+Q  +       F  + E  L  D     S++   +
Sbjct: 499 DAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACS 558

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
              LVE+         +V   LD    +  +++D+  + G  +EA  L +EMP + + V 
Sbjct: 559 HRGLVEKALWYFNSMTQV-YKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVM 617

Query: 386 WTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           W+ ++     +    LAK+A     KM   D   D  AY+ + +  + +G  E +
Sbjct: 618 WSSVLNSCRIHKNQDLAKKAADQLFKM---DALRDAAAYVNMSNIYAEAGKWENA 669



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 33/328 (10%)

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV-- 190
           + +    +K+GF+      N  +    +  +I +A ++FD MP ++  + N M++GYV  
Sbjct: 31  IPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKS 90

Query: 191 ------------------------LAGYSD-----KGLLLFRKMQEHGEIPDEFTFTSTL 221
                                   + GYS      +   L+ +M   G  PD  TF + L
Sbjct: 91  RNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLL 150

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
                  ++    QIH  +I  GF  S   ++  SLVD Y K  CL  A ++F  +  K 
Sbjct: 151 SGFDDTTTLKEVLQIHSHIIRFGF--SASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKD 208

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
            +S++ +I GY +     EA++LF Q+R    Q  GF  ++M+G+      V  G+QIH 
Sbjct: 209 SVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHG 268

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
            A K     D  V+N+++D Y K   ID A  LF+EMP  + V++ +IITGY  +G  ++
Sbjct: 269 LAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEK 328

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +  LF+++     +     +  +LS  +
Sbjct: 329 SFDLFKRLQGTSFDRKNFPFATMLSVAA 356



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 151/326 (46%), Gaps = 2/326 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L   +  L L  G Q H   V      ++ + N L+DMYAKC +   A  +F  + 
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN V WTA++  ++Q G  +  L +F +M   +V  ++ T ++ +KAS  L+SV  G Q
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++ G   +   G+ ++DMY+ CG + +A  +F  MP ++++ WNA+I+ Y   G 
Sbjct: 468 LHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGD 527

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++     F  M E G  PD  +F S L AC   G V         + T  +    +    
Sbjct: 528 AEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM-TQVYKLDPRRKHY 586

Query: 255 GSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            +++D   + G   EA  +  ++  +   + WSS++      +N   A +   QL +   
Sbjct: 587 ATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDA 646

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQI 339
             D     +M  ++A+    E   ++
Sbjct: 647 LRDAAAYVNMSNIYAEAGKWENAAKV 672



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++   A +L+  +    +  G QLH +++++G    +   + L+DMYA CG M  A  VF
Sbjct: 445 DQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVF 504

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
            +M +RN+V W AL+  + QNG+A+A  S F  M  S + P+  +  + + A      VE
Sbjct: 505 KEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE 564

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
             +      M   ++ +P   +  ++ID+  + GR NEA  +   MP
Sbjct: 565 KALWYFN-SMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMP 610



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 1/138 (0%)

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +TS  N +V  Y+K   +  A ELF  M  +N V+WT++I GY ++   KEA  L+ +M 
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
              V+PD + +  +LS    +  ++E  +  S +         I  ++ +VDS  +   L
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIV-FNSLVDSYCKTCCL 194

Query: 471 DEAKNLIESMPVKPSIAI 488
           D A  L   MP K S++ 
Sbjct: 195 DIASQLFSEMPTKDSVSF 212


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/665 (36%), Positives = 372/665 (55%), Gaps = 11/665 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG  +  G   +L+L ++++ MY K   +  A  VFD+M E++ + W  ++ G+ +
Sbjct: 138 GCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197

Query: 91  NGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           N      + +F  +   S  + +  TL   + A   L  +  GMQIH +  K+G   +  
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V    I +YSKCG+I  A+ +F       ++ +NAMI GY   G ++  L LF+++   G
Sbjct: 258 VLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                 T  S +   G L  +     IHG+ + S F     T ++ +L   Y K   +  
Sbjct: 318 AKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNF--LSHTSVSTALTTVYSKLNEIES 372

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR++FD   +KS+ SW+++I GY Q     +A+ LFR+++      +   ++ ++   A 
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQ 432

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +  GK +H             VS +++ MY KCG I EA  LF+ MP KN VTW  +
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTM 492

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GYG HG  +EA+ +F +ML   + P  V +L VL ACSH+GLV+E  E F+ + +   
Sbjct: 493 ISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
            +P ++HY+C+VD LGRAG L  A   IE+MP++P  ++W+TLL ACR+H D  L R V 
Sbjct: 553 FEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVS 612

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E L  LD DN   +V++SNIH+   ++ +   +R+ A+ + L K  G + +E+ +  H F
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 672

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +HP  + IH+ L ++E +M+E  G+    + ALHD++EE +E  ++VHSE+LAI 
Sbjct: 673 TSGDQSHPQVKAIHEKLEKLEGKMREA-GYQPETELALHDVEEEERELMVKVHSERLAIA 731

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L+      +PG  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ GVCS
Sbjct: 732 FGLI----ATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCS 787

Query: 690 CGDYW 694
           CGDYW
Sbjct: 788 CGDYW 792



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 18/489 (3%)

Query: 23  SKNLLLD---------YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           SKN  LD         +  Q H  +V  GF  D+ L   L    +  G +  A  +F  +
Sbjct: 19  SKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENG 132
              +V  +  LM GF  N +  + L++F  +  S+ +KPN  T +  I A+        G
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             IHG  +  G +   ++G++I+ MY K  R+ +A ++FD MP K  I WN MI+GY   
Sbjct: 139 CVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 193 GYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
               + + +FR +  E     D  T    L A   L  +  G QIH     +G  YS   
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHDY 257

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V+ G  +  Y KCG +  A  +F    +  +++++++I GY        ++ LF++L   
Sbjct: 258 VLTG-FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
             ++    L S++ V     L+     IH Y+ K      TSVS ++  +Y K   I+ A
Sbjct: 317 GAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESA 373

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            +LF+E P K++ +W  +I+GY ++GL ++A+ LFR+M   +  P+ V    +LSAC+  
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQL 433

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G +   + +   L      +  I   + ++    + G + EA+ L + MP K  +  W T
Sbjct: 434 GALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVT-WNT 491

Query: 492 LLSACRVHG 500
           ++S   +HG
Sbjct: 492 MISGYGLHG 500



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 221/455 (48%), Gaps = 24/455 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           L D L   ++   L  G+Q+H    K G +S D +L    I +Y+KCG++  A  +F + 
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMASTLFREF 282

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
              ++V++ A++ G+  NG  +  LSLF ++  S  K    TL + +  SG L  +    
Sbjct: 283 RRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---Y 339

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IHG  +KS F  +  V  ++  +YSK   I  A ++FD  P KSL +WNAMI+GY   G
Sbjct: 340 AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            ++  + LFR+MQ     P+  T T  L AC  LG++  G  +H  + ++ F  S+   +
Sbjct: 400 LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YV 457

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           + +L+  Y KCG + EARR+FD + +K+ ++W+++I GY    +  EA+ +F ++    +
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGI 517

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQ-----IHAYAAKVPSGLDTSVSN--SIVDMYLKCG 366
                    ++   +   LV++G +     IH Y      G + SV +   +VD+  + G
Sbjct: 518 APTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY------GFEPSVKHYACVVDILGRAG 571

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
            +  A +    MP++     W  ++     H     A  +  K+   +++PD V Y  +L
Sbjct: 572 HLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF--ELDPDNVGYHVLL 629

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           S   HS      Q    R    KR   +   Y+ I
Sbjct: 630 SNI-HSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/667 (34%), Positives = 384/667 (57%), Gaps = 12/667 (1%)

Query: 33  QLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           QLH   +++G    D   +  L+  Y + G +  A   FD+M  R+V +W A++ G  +N
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
             A   + LF +M    V  +  T+S+ +    +L      + +H   +K G +    V 
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++ID+Y K G + E  ++FD M ++ L+TWN++I+G+   G     + +F  M++ G  
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEA 270
           PD  T  S   A    G + GG  +H +++  G  + V  +IAG ++VD Y K   +  A
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRG--WDVGDIIAGNAIVDMYAKLSKIEAA 326

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFAD 329
           +R+FD +  +  +SW++LI GY Q    +EA+ ++  + +   L+       S++  ++ 
Sbjct: 327 QRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSH 386

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++QG ++HA + K    LD  V   ++D+Y KCG +DEA  LF + P ++   W  +
Sbjct: 387 LGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAV 446

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+G G HG   +A+ LF +M  + + PD V ++++L+ACSH+GLV++ + +F+ +     
Sbjct: 447 ISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYG 506

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +KP  +HY+C+VD  GRAG+LD+A + I +MP+KP  AIW  LL ACR+HG++E+G+   
Sbjct: 507 IKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVAS 566

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + L  LD  N   YV+MSN++A  G W+  + +R L R + L+K  G S +EV + ++ F
Sbjct: 567 QNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVF 626

Query: 570 YGGD--DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
           Y G+  + HP  E+I + L+++  +++  LG+V    + L D++E+ KE+ L  HSE+LA
Sbjct: 627 YSGNQMNIHPQHEEIQRELLDLLAKIR-SLGYVPDYSFVLQDVEEDEKEQILNNHSERLA 685

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   ++    N  P   + ++KNLRVCGDCH   K +SKI +   +VRD+ RFH F+ G 
Sbjct: 686 IAFGII----NTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGY 741

Query: 688 CSCGDYW 694
           CSCGD+W
Sbjct: 742 CSCGDFW 748



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 4/174 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++H   +K G + D+ +   +ID+YAKCG+++ A  +F++   R+   W A++ G
Sbjct: 390 LQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISG 449

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              +G+    LSLF QM    + P+  T  + + A      V+ G     M M++ +   
Sbjct: 450 VGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNM-MQTAYGIK 508

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSDKG 198
           P+  +   ++DM+ + G++++A      MP K     W A++    + G  + G
Sbjct: 509 PIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMG 562


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/662 (35%), Positives = 383/662 (57%), Gaps = 8/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q++  L+  G  +   L   L++  +  GE++ A  +FDK  + +V  W A++  + ++G
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + ++ +M  + V P+ F+    +KA   L ++E G ++HG   + GFE +  V N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            ++ +Y+KCG I  A  +F  +  +++++W ++I+GY   G   + L +F +M++    P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D     S L+A   +  +  G  IHG +I  G       +I  SL   Y KCG ++ AR 
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI--SLTSLYAKCGHVMVARL 330

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F+ +E  S+I W+++I GY +     EA+ELFR ++ ++++ D   ++S +   A    
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E  + +  Y +      D  V+ S++D Y KCG +D A  +F+ +P K+VV W+ ++ G
Sbjct: 391 LELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVG 450

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG  +E++ LF  M    V P+ V ++ +L+AC +SGLVEE  + F R+  D  ++P
Sbjct: 451 YGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEP 509

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           R +HY+C+VD LGRAG LD A N + +MP++P +++W  LLSAC++H  + LG    E L
Sbjct: 510 RHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERL 569

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             LD  N  +YV +SN++A +  W+   ++R L R KGL K  G S +E++ ++  F  G
Sbjct: 570 FSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAG 629

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D THP +++I + + ++E+R+KE  GFV   +  LHD+  E  EE+L  HSE+LAI   L
Sbjct: 630 DKTHPRSKEIFEEVEDLERRLKEA-GFVPHTESVLHDLNYEETEETLCNHSERLAIAYGL 688

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    +  PG  +R+ KNLR C +CH  IK +SK++    VVRDA RFH F+ G CSCGD
Sbjct: 689 I----STPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGD 744

Query: 693 YW 694
           YW
Sbjct: 745 YW 746



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 206/381 (54%), Gaps = 7/381 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L+ G ++HG + + GF  D+ + N L+ +YAKCGE+  A AVF ++++R +
Sbjct: 180 LKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTI 239

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G+ QNG     L +F +M  ++V+P+   L + ++A   +  +E+G  IHG 
Sbjct: 240 VSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    +  S+  +Y+KCG +  A   F+ +   SLI WNAMI+GYV  GY+++ 
Sbjct: 300 VIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEA 359

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR M+     PD  T TS++ AC  +GS+     +  ++  S F   V  ++  SL+
Sbjct: 360 IELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDV--IVNTSLI 417

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  AR VFD I  K V+ WS++++GY       E++ LF  +R+  +  +  
Sbjct: 418 DTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDV 477

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++    +  LVE+G  +  +      G++    +   +VD+  + G +D A     
Sbjct: 478 TFVGLLTACKNSGLVEEGWDL--FHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVM 535

Query: 377 EMPVK-NVVTWTVIITGYGKH 396
            MP++  V  W  +++    H
Sbjct: 536 NMPIEPGVSVWGALLSACKIH 556


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/676 (37%), Positives = 380/676 (56%), Gaps = 47/676 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL+  N ++  Y K G ++ A A+F++M E++VVSW A++ GF QNG  +    +F QM 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179

Query: 106 SSSVKPNEFTLSTNIKASGVLSS-VENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                     +   I  +G+LS+ V+NG ++       S  +W  V  N ++  Y +  R
Sbjct: 180 ---------LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +++A  +FD MP +  I+WN MI GY   G   +   LF ++     I D F +T+ +  
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSG 286

Query: 224 CGSLGSVGGGTQIHGFL----------ITSGFPYSVKTVIAGSLVDF------------- 260
               G +   T+I   +          + +G+  S +   A  L D              
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMV 346

Query: 261 --YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +CG + +A+ +FD + Q+  ISW+++I GYAQ     EA+ LF +++     ++  
Sbjct: 347 TGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L+  +   A+ A +E GKQ+H    K          N+++ MY KCG I+EA ++F ++
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K++V+W  +I GY +HG  KEA+ LF  M +  ++PD V  + VLSACSH+GLV++  
Sbjct: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGM 525

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF+ +  +  +    +HY+C++D LGRAGRLDEA NL++SMP  P  A W  LL A R+
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HGD ELG +  E +  ++ DN   YV++SN++A +G W E   +R   R KG+KKV G S
Sbjct: 586 HGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYS 645

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  + H F  GD +HP  E+I+  L E++  +K++ GFV   K  LHD++EE KE  
Sbjct: 646 WVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTKLVLHDVEEEEKEHM 704

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L+ HSEKLA+      G L+  PG+ IRV KNLRVC DCH  IK +SKI +   +VRD+ 
Sbjct: 705 LKYHSEKLAVAF----GILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSN 760

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 761 RFHHFSEGSCSCGDYW 776



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 217/456 (47%), Gaps = 53/456 (11%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           +++ ++V W   +  +++ G  ++ LS+F  M   S      T++ N   SG LS+ +  
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS------TVTYNAMISGYLSNNKFD 108

Query: 133 MQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
                 C +  FE  P    +  N ++  Y K G ++ A  +F+ MP K +++WNAM++G
Sbjct: 109 ------CARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSG 162

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +   G+ ++   +F +M     + +E ++   L A    G +    +    L  S   + 
Sbjct: 163 FAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARR----LFDSKMDWE 214

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +  V    L+  YV+   L +AR +FD +  +  ISW+ +I GYAQ   L+EA  LF +L
Sbjct: 215 I--VSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 309 RERSL-----QVDGFVLSSMM-------------------GVFADFALVEQGKQIHAYAA 344
             R +      V GFV + M+                    + A +   +Q ++      
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           ++PS  +TS  N++V  Y +CG ID+A  LF+EMP ++ ++W  +I+GY + G ++EA+ 
Sbjct: 333 QMPS-RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF KM  D    +  A    LS+C+    +E  ++   RL         I   + ++   
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMY 450

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           G+ G ++EA ++ E +  K  I  W T+++    HG
Sbjct: 451 GKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARHG 485



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  LA +L  C++   L+ G QLHG LVK GF    +  N L+ MY KCG +  A  VF+
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E+++VSW  ++ G+ ++G  K  L+LF  M   ++KP++ TL   + A      V+ 
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDK 523

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGY 189
           GM+  + M    G   N      +ID+  + GR++EA  +   MP      TW A++   
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 584 RIHGDTELG 592



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 140/283 (49%), Gaps = 41/283 (14%)

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           TV   +++  Y+       AR+VF+ +  + +ISW+ ++ GY +  NL+ A  LF Q+ E
Sbjct: 91  TVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAY-------------AAKVPSG-------- 349
           +    D    ++M+  FA    VE+ ++I                +A V +G        
Sbjct: 151 K----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRL 206

Query: 350 LDTSVSNSIVDM------YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            D+ +   IV        Y++   +D+A  LF+ MPV++ ++W ++ITGY ++GL  EA 
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF ++ + DV     A+ A++S    +G+++E+   F  +     +      ++ ++  
Sbjct: 267 RLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAG 317

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
             ++ ++++A+ L + MP + + + W T+++     G+++  +
Sbjct: 318 YVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAK 359



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 42/224 (18%)

Query: 326 VFADFALVEQGKQIHAYAAK--------VPSGL---DTSVSNSIVDMYLKCGLIDEATEL 374
              D  +V+  ++I AY  K        V +G+    T   N+++  YL     D A ++
Sbjct: 54  TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKV 113

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F +MP +++++W V+++GY K+G    A  LF +M     E D V++ A+LS  + +G V
Sbjct: 114 FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFV 169

Query: 435 EESQEYF--------------------------SRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           EE+++ F                          +R   D +M   I  ++C++    R  
Sbjct: 170 EEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKK 229

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           RLD+A++L + MPV+  I+ W  +++    +G L   R + E L
Sbjct: 230 RLDDARSLFDRMPVRDKIS-WNIMITGYAQNGLLSEARRLFEEL 272


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/685 (37%), Positives = 395/685 (57%), Gaps = 12/685 (1%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDK 72
           RLA  L+ C +   L  G  LH  LV  G +     L N LI MY+ C ++  A  +FD 
Sbjct: 19  RLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDA 78

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M   N+VSWT L+ G  QN   +  L+ F  M  + + P +F LS+  +A+  L++   G
Sbjct: 79  MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAG 138

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+H + ++ GF+    V +++ DMYSK G + EA R+FD MP K  + W AMI GY   
Sbjct: 139 AQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKN 198

Query: 193 GYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           G  +  ++ FR M+  G +  D+    S L A G L        IH  ++ SGF   V  
Sbjct: 199 GNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEV-- 256

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKS--VISWSSLILGYAQEENLAEAMELFRQLR 309
            +  +L D Y K   +  A RV   I+Q S  V+S +SLI GY + + + +A+ +F +LR
Sbjct: 257 AVRNALTDMYAKAADMDNAARVVK-IDQGSLNVVSATSLIDGYIETDCIEKALLMFIELR 315

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            + ++ + F  SSM+   A  AL+EQG Q+HA   K     D+ VS++++DMY KCGLI 
Sbjct: 316 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLIS 375

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            + +LF E+     + W   I    +HG  +EA+  F +M    + P+ + ++++L+ACS
Sbjct: 376 LSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACS 435

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+GLV+E  +YF  + +   ++P+ EHYSCI+D  GRAGRLDEA+  I  MPVKP+   W
Sbjct: 436 HAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGW 495

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
            +LL ACR+ G+ ELG    + +++L+ DN   +V +S I+A  G W + + +RKL R  
Sbjct: 496 CSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDN 555

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            +KK+ G SWV+ +K+ H F   D +HP  EKI++ L E+ +R+KEE G+V   ++   +
Sbjct: 556 RIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEE-GYVPDTRFLPCN 614

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           +++ +K+  LR HSE++A+  AL+    +    K I V KNLR+C DCH  +K +SK+  
Sbjct: 615 LEDTAKQRILRYHSERIAVAFALI----SMPATKPIIVKKNLRICADCHSALKFISKVEN 670

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              +VRD +RFH F  G CSCGDYW
Sbjct: 671 RDIIVRDNSRFHHFVKGGCSCGDYW 695


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/689 (35%), Positives = 398/689 (57%), Gaps = 9/689 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +   +   L  CS    +D G+ +HG  VK+G   +LM+ N LIDMY+KCG ++ A 
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS--VKPNEFTLSTNIKASGV 125
            +F K+  ++VVSW +++  + + G       L  +M      ++ NE T+   + A   
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLE 428

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
            S + +   +HG  ++  F++  ++ N+ I  Y+KCG +  A  +F  M  KS+ +WNA+
Sbjct: 429 ESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAV 488

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I G+   G   K L  + +M   G +PD+F+  S L ACG LG +  G +IHGF++ +G 
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGL 548

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              + + +A SL+  Y  C      R  F+ +  K+ + W++++ GY+Q E   EA+ LF
Sbjct: 549 --EMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLF 606

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           RQ+    L+ D   ++S++G  +  + +  GK++H +A K     D  V+ S++DMY K 
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +  +  +FN +  K V +W V+ITG+G HG   +AV LF  M   D +PD   +L VL
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            AC H+GLV E   Y +++    +++P +EHY+C++D LGRAGRL+EA N I  MP +P 
Sbjct: 727 QACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPD 786

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW +LLS+   + DLE+G +  E LL L+ +   +Y+++SN++A AG W+    +R+ 
Sbjct: 787 AKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQK 846

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            +   L+K  G SW+E+  +++ F  G++++P +++I ++   +EK++  E+G+      
Sbjct: 847 MKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV-EIGYTPDCSC 905

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LH+++E  K + L+ HSEK+AI      G LN + G  +R+ KNLR+C DCH   K +S
Sbjct: 906 VLHELEEVEKRKILKGHSEKVAICF----GFLNTKEGTTLRISKNLRICRDCHNAAKYIS 961

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K  K   V+RD  RFH F+ G+CSCGDYW
Sbjct: 962 KAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 237/444 (53%), Gaps = 8/444 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKC 60
           N   + L   ++ +   L+ C +   ++ G +L   L V   FS D +LN  LI MY+ C
Sbjct: 97  NNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSIC 156

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTN 119
           G    +  VFD++L +N+  W AL+ G+++N      +  F ++ S +  +P+ FT    
Sbjct: 157 GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCL 216

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           IKA      +  G  +HGM +K G   +  VGN++I +Y KCG ++EA  +FD MP ++L
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNL 276

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE--IPDEFTFTSTLKACGSLGSVGGGTQIH 237
           I+WN++I G+   G+  +    FR + E G+  IPD  T  + L  C   G+V  G  IH
Sbjct: 277 ISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIH 336

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G  +  G  + +  ++  +L+D Y KCGCL EA  +F  IE KSV+SW+S+I  Y++E  
Sbjct: 337 GMAVKLGLVHEL--MVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394

Query: 298 LAEAMELFRQ--LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           + E  +L R+  + E  ++V+   + +++    + + +   + +H Y+ +        ++
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+ +  Y KCG +  A  +F  M  K+V +W  +I G+ ++G   +A+  + +M    + 
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514

Query: 416 PDGVAYLAVLSACSHSGLVEESQE 439
           PD  + +++L AC   GL++  +E
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKE 538



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 8/191 (4%)

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  ++  ++ MY  CG   E+  +F+ +  KN+  W  +++GY ++ L  EA+  F +++
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 411 -LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRA 467
            + + +PD   +  ++ AC+    +   +          +M   ++ +  + ++   G+ 
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAV---KMGLIMDLFVGNAMIALYGKC 258

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD-LELGREVGEILLRLDGDNPVNYVMM 526
           G LDEA  L + MP +  I+ W +L+     +G  LE  R    +L   DG  P    M+
Sbjct: 259 GFLDEAVELFDKMPEQNLIS-WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 527 SNIHADAGSWN 537
           + +   +G  N
Sbjct: 318 TLLPVCSGEGN 328


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 363/624 (58%), Gaps = 29/624 (4%)

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +  L+ +  M    ++ + F + + +KA   +S    G +IHG  +K+G   +  V N
Sbjct: 89  HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148

Query: 153 SIIDMYSKCGRINEAARMFDVMP----------------------AKSLITWNAMIAGYV 190
           +++ MYS+CG +  A  +FD M                        +S+++W AMIAGY+
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                ++G  LF +M E    P++ T  S + +CG +G+V  G ++H +++ +GF  S+ 
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL- 267

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +A +LVD Y KCG +  AR +FD ++ K V++W+++I  YAQ   +  A +LF Q+R+
Sbjct: 268 -ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++ +   + S++ + A    ++ GK  HAY  K    +D  +  +++DMY KCG I  
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  LF+E   +++ TW V++ GYG HG  ++A+ LF +M    V+P+ + ++  L ACSH
Sbjct: 387 AQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSH 446

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLV E +  F ++ +D  + P++EHY C+VD LGRAG LDEA  +IESMPV P+IAIW 
Sbjct: 447 AGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWG 506

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
            +L+AC++H +  +G      LL L+  N    V+MSNI+A A  WN+   +RK  +  G
Sbjct: 507 AMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTG 566

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G S +EV+  +H F  GD  HPL EKI ++L EM K++KE  G++      LH+I
Sbjct: 567 IKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEA-GYLPDTSVVLHNI 625

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            EE KE +L  HSEKLA+   L+    +  PG  IRV KNLR+C DCH   K LSKI K 
Sbjct: 626 DEEEKETALNYHSEKLAMAFGLI----STAPGTPIRVVKNLRICDDCHTVTKLLSKIYKR 681

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
           V +VRD  RFH F  G CSCG YW
Sbjct: 682 VIIVRDRNRFHHFREGSCSCGGYW 705



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 40/438 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS+  +   G ++HG  VK G   D+ + N L+ MY++CG +  A  +FDKM ER+V
Sbjct: 116 LKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDV 175

Query: 79  VSW----------------------TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           VSW                      TA++ G+++  + +    LF +M   +V PN+ T+
Sbjct: 176 VSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITM 235

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
            + I + G + +V+ G ++H   +++GF  +  +  +++DMY KCG I  A  +FD M  
Sbjct: 236 LSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKN 295

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           K ++TW AMI+ Y  A   D    LF +M+++G  P+E T  S L  C   G++  G   
Sbjct: 296 KDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWF 355

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H ++   G    V  ++  +L+D Y KCG +  A+R+F     + + +W+ ++ GY    
Sbjct: 356 HAYIDKQGV--EVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHG 413

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLD 351
              +A++LF ++    ++ +       +   +   LV +G     K IH +      GL 
Sbjct: 414 YGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDF------GLV 467

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             V +   +VD+  + GL+DEA ++   MPV  N+  W  ++     H  +       R+
Sbjct: 468 PKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARE 527

Query: 409 MLLDDVEPDGVAYLAVLS 426
           +L   +EP    Y  ++S
Sbjct: 528 LLA--LEPQNCGYKVLMS 543


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/635 (36%), Positives = 367/635 (57%), Gaps = 7/635 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G QLH  L K G S D ++   L+D+Y KCG++  A  +F+     NV
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++  F Q  +      LFCQM ++ ++PN+FT    ++       ++ G QIH +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GFE +  V   +IDMYSK G + +A R+ +++  K +++W +MIAGYV        
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F++MQ+ G  PD     S +  C  + ++  G QIH  +  SG  YS    I  +LV
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSG--YSGDVSIWNALV 488

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y +CG + EA   F+ IE K  I+W+ L+ G+AQ     EA+++F ++ +  ++ + F
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S +   A+ A ++QGKQIHA   K     +T V N+++ +Y KCG  ++A   F+EM
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLVEE  
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  + ++  ++PR +HY+C++D  GRAG+LD AK  IE MP+     +W+TLLSAC+V
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G    + LL L+  +  +YV++SN +A    W   +++RK+ R +G++K  GRS
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV   +H F+ GD  HPL E+I+  L  +  R+  ++G+     +  HD ++E ++ +
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA-KVGYKQEKYHLFHDKEQEGRDPT 847

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
             VHSEKLA+   L    ++  P   +RV KNLRV
Sbjct: 848 DLVHSEKLAVTFGL----MSLPPCMPLRVIKNLRV 878



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 272/532 (51%), Gaps = 19/532 (3%)

Query: 15  LADSLRCCSKN-LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +LR C  N        ++H   V  G     ++ N LID+Y+K G +  A  VF+++
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+ VSW A++ G+ QNG  +  L L+ QM  + V P  + LS+ + +         G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IH    K GF     VGN++I +Y +CG    A R+F  MP +  +T+N +I+G+   G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + +  L +F +MQ  G  PD  T +S L AC SLG +  GTQ+H +L  +G   S   ++
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI--SSDYIM 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            GSL+D YVKCG +  A  +F+  ++ +V+ W+ +++ + Q  +LA++ ELF Q++   +
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + + F    ++        ++ G+QIH+ + K     D  VS  ++DMY K G +++A  
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   +  K+VV+WT +I GY +H   K+A+  F++M    + PD +   + +S C+    
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 430 -HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
              GL   ++ Y S    D      +  ++ +V+   R GR+ EA +  E +  K  I  
Sbjct: 462 MRQGLQIHARIYVSGYSGD------VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT- 514

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           W  L+S     G   L  E  ++ +R+D  + V + + + + A + S N  E
Sbjct: 515 WNGLVSGFAQSG---LHEEALKVFMRMD-QSGVKHNVFTFVSALSASANLAE 562



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 255/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H    K GF  ++ + N +I +Y +CG    A  VF  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ V++  L+ G  Q G+ +  L +F +M  S + P+  T+S+ + A   L  ++ G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K+G   + ++  S++D+Y KCG +  A  +F+     +++ WN M+  +     
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   LF +MQ  G  P++FT+   L+ C     +  G QIH   + +GF   +   ++
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +ARRV +++++K V+SW+S+I GY Q E   +A+  F+++++  + 
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    + QG QIHA         D S+ N++V++Y +CG I EA   
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E+  K+ +TW  +++G+ + GL +EA+ +F +M    V+ +   +++ LSA ++   +
Sbjct: 504 FEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  +R+          E  + ++   G+ G  ++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIIT 621

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 622 SCSQHG 627


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/635 (36%), Positives = 367/635 (57%), Gaps = 7/635 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G QLH  L K G S D ++   L+D+Y KCG++  A  +F+     NV
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++  F Q  +      LFCQM ++ ++PN+FT    ++       ++ G QIH +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GFE +  V   +IDMYSK G + +A R+ +++  K +++W +MIAGYV        
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F++MQ+ G  PD     S +  C  + ++  G QIH  +  SG  YS    I  +LV
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSG--YSGDVSIWNALV 488

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y +CG + EA   F+ IE K  I+W+ L+ G+AQ     EA+++F ++ +  ++ + F
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S +   A+ A ++QGKQIHA   K     +T V N+++ +Y KCG  ++A   F+EM
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLVEE  
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  + ++  ++PR +HY+C++D  GRAG+LD AK  IE MP+     +W+TLLSAC+V
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G    + LL L+  +  +YV++SN +A    W   +++RK+ R +G++K  GRS
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV   +H F+ GD  HPL E+I+  L  +  R+  ++G+     +  HD ++E ++ +
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA-KVGYKQEKYHLFHDKEQEGRDPT 847

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
             VHSEKLA+   L    ++  P   +RV KNLRV
Sbjct: 848 DLVHSEKLAVTFGL----MSLPPCMPLRVIKNLRV 878



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 272/532 (51%), Gaps = 19/532 (3%)

Query: 15  LADSLRCCSKN-LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +LR C  N        ++H   V  G     ++ N LID+Y+K G +  A  VF+++
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+ VSW A++ G+ QNG  +  L L+ QM  + V P  + LS+ + +         G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IH    K GF     VGN++I +Y +CG    A R+F  MP +  +T+N +I+G+   G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + +  L +F +MQ  G  PD  T +S L AC SLG +  GTQ+H +L  +G   S   ++
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI--SSDYIM 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            GSL+D YVKCG +  A  +F+  ++ +V+ W+ +++ + Q  +LA++ ELF Q++   +
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + + F    ++        ++ G+QIH+ + K     D  VS  ++DMY K G +++A  
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   +  K+VV+WT +I GY +H   K+A+  F++M    + PD +   + +S C+    
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 430 -HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
              GL   ++ Y S    D      +  ++ +V+   R GR+ EA +  E +  K  I  
Sbjct: 462 MRQGLQIHARIYVSGYSGD------VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT- 514

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           W  L+S     G   L  E  ++ +R+D  + V + + + + A + S N  E
Sbjct: 515 WNGLVSGFAQSG---LHEEALKVFMRMD-QSGVKHNVFTFVSALSASANLAE 562



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 255/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H    K GF  ++ + N +I +Y +CG    A  VF  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ V++  L+ G  Q G+ +  L +F +M  S + P+  T+S+ + A   L  ++ G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K+G   + ++  S++D+Y KCG +  A  +F+     +++ WN M+  +     
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   LF +MQ  G  P++FT+   L+ C     +  G QIH   + +GF   +   ++
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +ARRV +++++K V+SW+S+I GY Q E   +A+  F+++++  + 
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    + QG QIHA         D S+ N++V++Y +CG I EA   
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E+  K+ +TW  +++G+ + GL +EA+ +F +M    V+ +   +++ LSA ++   +
Sbjct: 504 FEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  +R+          E  + ++   G+ G  ++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIIT 621

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 622 SCSQHG 627


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/709 (34%), Positives = 383/709 (54%), Gaps = 40/709 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K+     G+Q+HG +VKMG++ DL + N L+  YA+CGE++ A  VFD+M ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSWT+++CG+ +   AK  + LF +M     V PN  T+   I A   L  +E G +++ 
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
               SG E N ++ ++++DMY KC  I+ A R+FD   A +L   NAM + YV  G + +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L +F  M + G  PD  +  S + +C  L ++  G   HG+++ +GF       I  +L
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNAL 378

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL---- 313
           +D Y+KC     A R+FD +  K+V++W+S++ GY +   +  A E F  + E+++    
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438

Query: 314 ----------------------------QVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
                                         DG  + S+         ++  K I+ Y  K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               LD  +  ++VDM+ +CG  + A  +FN +  ++V  WT  I      G A+ A+ L
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M+   ++PDGVA++  L+ACSH GLV++ +E F  +     + P   HY C+VD LG
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L+EA  LIE MP++P+  IW +LL+ACRV G++E+     E +  L  +   +YV+
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL 678

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A AG WN+  ++R   + KGL+K  G S +++  + H F  GD++HP    I  +
Sbjct: 679 LSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L E+ +R    LG V  +   L D+ E+ K   L  HSEKLA+   L+    +   G  I
Sbjct: 739 LDEVSQR-ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLI----SSNKGTTI 793

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH F K  SK+     ++RD  RFH    G CSCGD+W
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 249/534 (46%), Gaps = 78/534 (14%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           + +L+ G+  +G     + LF +M +S + P+++T    + A     +  NG+QIHG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G+  +  V NS++  Y++CG ++ A ++FD M  +++++W +MI GY    ++   + 
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 201 LFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           LF +M    E+ P+  T    + AC  L  +  G +++ F+  SG    V  ++  +LVD
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y+KC  +  A+R+FD     ++   +++   Y ++    EA+ +F  + +  ++ D   
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKC------------ 365
           + S +   +    +  GK  H Y  +  +G ++  ++ N+++DMY+KC            
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 366 -------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                              G +D A E F  MP KN+V+W  II+G  +  L +EA+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 407 RKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQE-YFSRLCNDKRMKPRIEHYSCIVDSL 464
             M   + V  DGV  +++ SAC H G ++ ++  Y+    N  ++  R+   + +VD  
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMF 515

Query: 465 GRAGRLDEAKNLIESMP----------------------------------VKPSIAIWQ 490
            R G  + A ++  S+                                   +KP    + 
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERL 542
             L+AC   G ++ G+E+   +L+L G +P  V+Y  M ++   AG   E  +L
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 36/313 (11%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  +  ++  CS+   + +G   HG +++ GF     + N LIDMY KC   + A  +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKA-------------------------------CLS 99
           D+M  + VV+W +++ G+++NG   A                                + 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 100 LFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
           +FC M S   V  +  T+ +   A G L +++    I+    K+G + +  +G +++DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           S+CG    A  +F+ +  + +  W A I    +AG +++ + LF  M E G  PD   F 
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 219 STLKACGSLGSVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DL 276
             L AC   G V  G +I +  L   G   S + V  G +VD   + G L EA ++  D+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGV--SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 277 IEQKSVISWSSLI 289
             + + + W+SL+
Sbjct: 634 PMEPNDVIWNSLL 646



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 11/265 (4%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC---LVEARRVFD 275
           S+LK C ++  +      H  L   G    V T+    LV    + G    L  A+ VF+
Sbjct: 37  SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTIT--KLVARSCELGTRESLSFAKEVFE 91

Query: 276 LIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             E   +   ++SLI GYA      EA+ LF ++    +  D +     +   A      
Sbjct: 92  NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
            G QIH    K+    D  V NS+V  Y +CG +D A ++F+EM  +NVV+WT +I GY 
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211

Query: 395 KHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
           +   AK+AV LF +M+ D +V P+ V  + V+SAC+    +E  ++ ++ + N   ++  
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVN 270

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIE 478
               S +VD   +   +D AK L +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFD 295


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 374/709 (52%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+ MYAK G +  A  VF +M ER+ VSWT ++ G  + G     +  F  M    + 
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P++F L+  + +     +   G ++H   +K G      V NS++ MY KCG        
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  R++ A  MF+ M  +S+++WNA+IAGY   G  D  L
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV--------- 249
             F +M     + PDEFT TS L AC +L  +  G Q+H +++ +G PYS          
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIST 340

Query: 250 ---------------KTVIAG-------SLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                          K V+A        +L++ YVK G   +AR VFD++  + VI+W++
Sbjct: 341 YAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTA 400

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q     EAMELFR +     + +   L++++   A  A +  GKQIH  A +  
Sbjct: 401 MIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSL 460

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLF 406
                SVSN+I+ +Y + G +  A  +F+++   K  VTWT +I    +HGL ++A+ LF
Sbjct: 461 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLF 520

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   V+PD V Y+ V SAC+H+G +++ + Y+ ++ N+  + P + HY+C+VD L R
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG L EA   I+ MPV P   +W +LL+ACRV  + +L     E LL +D DN   Y  +
Sbjct: 581 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSAL 640

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G WN+  R+ KL + K +KK  G SW  V  ++H F   D  HP  + I +  
Sbjct: 641 ANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKA 700

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
            EM + +K+  GFV  +   LHD+ +E KEE L  HSEKLAI       GL   P K  +
Sbjct: 701 AEMWEEIKKA-GFVPDLNSVLHDVDDELKEELLSRHSEKLAIAF-----GLISTPEKTTL 754

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  IK +SK++    +VRDATRFH F  G CSC DYW
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 140/306 (45%), Gaps = 35/306 (11%)

Query: 245 FPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
            PY+ +      SL+  Y K G L +AR VF  + ++  +SW+ +++G  +     +A++
Sbjct: 90  IPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVK 149

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            F  +    L    F+L++++   A       G+++H++  K+       V+NS++ MY 
Sbjct: 150 TFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYG 209

Query: 364 KC-------------------------------GLIDEATELFNEMPVKNVVTWTVIITG 392
           KC                               G +D A  +F  M  +++V+W  II G
Sbjct: 210 KCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAG 269

Query: 393 YGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           Y ++GL   A+  F +ML    +EPD     +VLSAC++  +++  ++  S +     M 
Sbjct: 270 YNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTG-MP 328

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP-SIAIWQTLLSACRVHGDLELGREVGE 510
              +  + ++ +  ++G ++ A+ +++   V   ++  +  LL      GD +  REV +
Sbjct: 329 YSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFD 388

Query: 511 ILLRLD 516
           ++   D
Sbjct: 389 VMNNRD 394


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/669 (36%), Positives = 403/669 (60%), Gaps = 18/669 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q+H  +VK G    + ++N LI++Y KCG +  A  +FDK   ++VV+W +++ G+  
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG     L +F  M  + V+ +E + ++ IK    L  +    Q+H   +K GF ++  +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 151 GNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             +++  YSKC  + +A R+F ++    ++++W AMI+G++     ++ + LF +M+  G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+EFT++  L A      V   +++H  ++ + +  S  + +  +L+D YVK G + E
Sbjct: 393 VRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERS--STVGTALLDAYVKLGKVEE 446

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV-FA 328
           A +VF  I+ K +++WS+++ GYAQ      A+++F +L +  ++ + F  SS++ V  A
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A + QGKQ H +A K  S LD+S  VS++++ MY K G I+ A E+F     K++V+W
Sbjct: 507 TNASMGQGKQFHGFAIK--SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+GY +HG A +A+ +F++M    V+ DGV ++ V +AC+H+GLVEE ++YF  +  
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           D ++ P  EH SC+VD   RAG+L++A  +IE+MP      IW+T+L+ACRVH   ELGR
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              E ++ +  ++   YV++SN++A++G W E  ++RKL   + +KK  G SW+EV  + 
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
           + F  GD +HPL ++I+  L ++  R+K +LG+     Y L DI +E KE  L  HSE+L
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLK-DLGYEPDTSYVLQDIDDEHKEAVLAQHSERL 803

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG- 685
           AI   L+        G  + + KNLRVCGDCH  IK ++KI +   VVRD+ RFH F   
Sbjct: 804 AIAFGLIA----TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSD 859

Query: 686 GVCSCGDYW 694
           GVCSCGD+W
Sbjct: 860 GVCSCGDFW 868



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 261/496 (52%), Gaps = 18/496 (3%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G QLH   +K GF  D+ +   L+D Y K         VFD+M ERNVV+WT L+ G+ 
Sbjct: 111 FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV---ENGMQIHGMCMKSGFEW 146
           +N      L+LF +M +   +PN FT +    A GVL+       G+Q+H + +K+G + 
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDK 227

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              V NS+I++Y KCG + +A  +FD    KS++TWN+MI+GY   G   + L +F  M+
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            +     E +F S +K C +L  +    Q+H  ++  GF +     I  +L+  Y KC  
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTA 345

Query: 267 LVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           +++A R+F  I    +V+SW+++I G+ Q +   EA++LF +++ + ++ + F  S ++ 
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                  V    ++HA   K      ++V  +++D Y+K G ++EA ++F+ +  K++V 
Sbjct: 406 ALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+ ++ GY + G  + A+ +F ++    ++P+   + ++L+ C+ +       + F    
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD---- 501
              R+   +   S ++    + G ++ A+ + +    K  ++ W +++S    HG     
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-WNSMISGYAQHGQAMKA 580

Query: 502 LELGREVGEILLRLDG 517
           L++ +E+ +  +++DG
Sbjct: 581 LDVFKEMKKRKVKMDG 596



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 243/454 (53%), Gaps = 15/454 (3%)

Query: 3   RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           R+++  +SE    A  ++ C+    L +  QLH ++VK GF FD  +   L+  Y+KC  
Sbjct: 287 RLNYVRLSESS-FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345

Query: 63  MNGACAVFDKM-LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
           M  A  +F ++    NVVSWTA++ GFLQN   +  + LF +M    V+PNEFT S  + 
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A  V+S  E    +H   +K+ +E +  VG +++D Y K G++ EAA++F  +  K ++ 
Sbjct: 406 ALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFL 240
           W+AM+AGY   G ++  + +F ++ + G  P+EFTF+S L  C +   S+G G Q HGF 
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           I S    S+   ++ +L+  Y K G +  A  VF    +K ++SW+S+I GYAQ     +
Sbjct: 522 IKSRLDSSL--CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IV 359
           A+++F+++++R +++DG     +        LVE+G++      +      T   NS +V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-D 417
           D+Y + G +++A ++   MP     T W  I+     H   K  +G      +  ++P D
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH--KKTELGRLAAEKIIAMKPED 697

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
             AY+ + +  + SG  +E  +   +L N++ +K
Sbjct: 698 SAAYVLLSNMYAESGDWQERAK-VRKLMNERNVK 730



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 227/443 (51%), Gaps = 23/443 (5%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FDK   R+  S+ +L+ GF ++G  +    LF  +    ++ +    S+ +K S  L  
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G Q+H  C+K GF  +  VG S++D Y K     +  ++FD M  ++++TW  +I+G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y     +D+ L LF +MQ  G  P+ FTF + L      G  G G Q+H  ++ +G   +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   ++ SL++ Y+KCG + +AR +FD  E KSV++W+S+I GYA      EA+ +F  +
Sbjct: 229 IP--VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R   +++     +S++ + A+   +   +Q+H    K     D ++  +++  Y KC  +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346

Query: 369 DEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            +A  LF E+  V NVV+WT +I+G+ ++   +EAV LF +M    V P+   Y  +L+A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406

Query: 428 CS-------HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
                    H+ +V+ + E  S +             + ++D+  + G+++EA  +   +
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYVKLGKVEEAAKVFSGI 454

Query: 481 PVKPSIAIWQTLLSACRVHGDLE 503
             K  +A W  +L+     G+ E
Sbjct: 455 DDKDIVA-WSAMLAGYAQTGETE 476



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 151/270 (55%), Gaps = 6/270 (2%)

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           R+  A  +FD  P +   ++ +++ G+   G + +   LF  +   G   D   F+S LK
Sbjct: 42  RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
              +L     G Q+H   I  GF   V   +  SLVD Y+K     + R+VFD +++++V
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ++W++LI GYA+     E + LF +++    Q + F  ++ +GV A+  +  +G Q+H  
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219

Query: 343 AAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
             K  +GLD +  VSNS++++YLKCG + +A  LF++  VK+VVTW  +I+GY  +GL  
Sbjct: 220 VVK--NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           EA+G+F  M L+ V     ++ +V+  C++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCAN 307



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 3/238 (1%)

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A  +FD    +   S+ SL+ G++++    EA  LF  +    +++D  + SS++ V
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A       G+Q+H    K     D SV  S+VD Y+K     +  ++F+EM  +NVVTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           T +I+GY ++ +  E + LF +M  +  +P+   + A L   +  G+     +  + +  
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-DLE 503
           +  +   I   + +++   + G + +A+ L +   VK S+  W +++S    +G DLE
Sbjct: 223 NG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLE 278


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/664 (37%), Positives = 388/664 (58%), Gaps = 12/664 (1%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q H   +K GF   L   N LID Y KCG +  A  VFD++  R++V+W +++  +++N
Sbjct: 99  IQSHA--LKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRN 154

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW-NPVV 150
           G +K  + ++ +M    + P+EFT S+  KA   L  V  G + HG  +  G    N  V
Sbjct: 155 GRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFV 214

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++++DMY+K G++ +A  + D +  K ++ + A+I GY   G   + L +FR M + G 
Sbjct: 215 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 274

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             +E+T +S L  CG+L  +  G  IHG ++ +G   +V +    SL+  Y +CG + ++
Sbjct: 275 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVAS--QTSLLTMYYRCGLVDDS 332

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            +VF      + ++W+S+I+G  Q      A+  FRQ+   S+  + F LSS++   +  
Sbjct: 333 LKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL 392

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A++EQGKQIHA   K    +D  V  +++D Y KCG  + A  +FN +   +VV+   +I
Sbjct: 393 AMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 452

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G   EA+ LF  M    +EP+ V +L VLSAC+++GL+EE    FS   N   +
Sbjct: 453 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI 512

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +   +HY+C+VD LGRAGRL EA+ LI  + +   + IW+TLLSACR+HGD+E+ + V  
Sbjct: 513 ELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMN 571

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            ++ L  ++   +V++SN++A  G+W++   ++   R   LKK    SWV+V++EIH F 
Sbjct: 572 RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFM 631

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP    I + L E+ +++K ELG+V   ++ L D+ EE K  SL  HSEKLA+  
Sbjct: 632 AGDWSHPNFRDIREKLEELIEKVK-ELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAF 690

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL R   +      IR+ KNLRVCGDCH ++K +SKI+    + RD  RFH F  G+CSC
Sbjct: 691 ALWR---SNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSC 747

Query: 691 GDYW 694
           GDYW
Sbjct: 748 GDYW 751



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 1/275 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L CC     L  G  +HG +VK G    +     L+ MY +CG ++ +  VF + +
Sbjct: 281 LSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFI 340

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             N V+WT+++ G +QNG  +  L  F QM  SS+ PN FTLS+ ++A   L+ +E G Q
Sbjct: 341 NPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ 400

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + MK G + +  VG ++ID Y KCG    A  +F+ +    +++ N+MI  Y   G+
Sbjct: 401 IHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGF 460

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF  M++ G  P+  T+   L AC + G +  G  I      SG     K   A
Sbjct: 461 GHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYA 520

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
             +VD   + G L EA  + + +    V+ W +L+
Sbjct: 521 -CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLL 554


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/689 (35%), Positives = 398/689 (57%), Gaps = 9/689 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +   +   L  CS    +D G+ +HG  VK+G   +LM+ N LIDMY+KCG ++ A 
Sbjct: 309 LIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS--VKPNEFTLSTNIKASGV 125
            +F K+  ++VVSW +++  + + G       L  +M      ++ NE T+   + A   
Sbjct: 369 ILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLE 428

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
            S + +   +HG  ++  F++  ++ N+ I  Y+KCG +  A  +F  M  KS+ +WNA+
Sbjct: 429 ESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAV 488

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I G+   G   K L  + +M   G +PD+F+  S L ACG LG +  G +IHGF++ +G 
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGL 548

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              + + +A SL+  Y  C      R  F+ +  K+ + W++++ GY+Q E   EA+ LF
Sbjct: 549 --EMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLF 606

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           RQ+    L+ D   ++S++G  +  + +  GK++H +A K     D  V+ S++DMY K 
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +  +  +FN +  K V +W V+ITG+G HG   +AV LF  M   D +PD   +L VL
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            AC H+GLV E   Y +++    +++P +EHY+C++D LGRAGRL+EA N I  MP +P 
Sbjct: 727 QACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPD 786

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW +LLS+   + DLE+G +  E LL L+ +   +Y+++SN++A AG W+    +R+ 
Sbjct: 787 AKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQK 846

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            +   L+K  G SW+E+  +++ F  G++++P +++I ++   +EK++  E+G+      
Sbjct: 847 MKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV-EIGYTPDCSC 905

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LH+++E  K + L+ HSEK+AI      G LN + G  +R+ KNLR+C DCH   K +S
Sbjct: 906 VLHELEEVEKRKILKGHSEKVAICF----GFLNTKEGTTLRISKNLRICRDCHNAAKYIS 961

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K  K   V+RD  RFH F+ G+CSCGDYW
Sbjct: 962 KAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 237/444 (53%), Gaps = 8/444 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKC 60
           N   + L   ++ +   L+ C +   ++ G +L   L V   FS D +LN  LI MY+ C
Sbjct: 97  NNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSIC 156

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTN 119
           G    +  VFD++L +N+  W AL+ G+++N      +  F ++ S +  +P+ FT    
Sbjct: 157 GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCL 216

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           IKA      +  G  +HGM +K G   +  VGN++I +Y KCG ++EA  +FD MP ++L
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNL 276

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE--IPDEFTFTSTLKACGSLGSVGGGTQIH 237
           I+WN++I G+   G+  +    FR + E G+  IPD  T  + L  C   G+V  G  IH
Sbjct: 277 ISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIH 336

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G  +  G  + +  ++  +L+D Y KCGCL EA  +F  IE KSV+SW+S+I  Y++E  
Sbjct: 337 GMAVKLGLVHEL--MVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394

Query: 298 LAEAMELFRQ--LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           + E  +L R+  + E  ++V+   + +++    + + +   + +H Y+ +        ++
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+ +  Y KCG +  A  +F  M  K+V +W  +I G+ ++G   +A+  + +M    + 
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514

Query: 416 PDGVAYLAVLSACSHSGLVEESQE 439
           PD  + +++L AC   GL++  +E
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKE 538



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 8/191 (4%)

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  ++  ++ MY  CG   E+  +F+ +  KN+  W  +++GY ++ L  EA+  F +++
Sbjct: 142 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 201

Query: 411 -LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRA 467
            + + +PD   +  ++ AC+    +   +          +M   ++ +  + ++   G+ 
Sbjct: 202 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAV---KMGLIMDLFVGNAMIALYGKC 258

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD-LELGREVGEILLRLDGDNPVNYVMM 526
           G LDEA  L + MP +  I+ W +L+     +G  LE  R    +L   DG  P    M+
Sbjct: 259 GFLDEAVELFDKMPEQNLIS-WNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 527 SNIHADAGSWN 537
           + +   +G  N
Sbjct: 318 TLLPVCSGEGN 328


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/664 (36%), Positives = 375/664 (56%), Gaps = 13/664 (1%)

Query: 34  LHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           LH   +K+G    ++++ N L+D Y K G +  A  VF +M  R+ V++ A+M G  + G
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEG 220

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +    L LF  M    +    FT ST +  +  +  +  G Q+HG+  ++    N  V N
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSS-NVFVNN 279

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++D YSKC  ++E  ++F  M  +  +++N MIAGY     +   L LFR+MQ      
Sbjct: 280 SLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDR 339

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
               + S L   GS+  +G G QIH  L+  G   S + ++  +L+D Y KCG L  A+ 
Sbjct: 340 QALPYASLLSVAGSVPHIGIGKQIHAQLVLLGL--SSEDLVGNALIDMYSKCGMLDAAKT 397

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F     K+ +SW+++I G  Q     EA++LF  +R   L  D    SS +   ++ A+
Sbjct: 398 NFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAM 457

Query: 333 VEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           +  G+Q+H+Y  +  SG  +SV   ++++DMY KCG +DEA + F+EMP +N ++W  +I
Sbjct: 458 IGLGRQLHSYLIR--SGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVI 515

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + Y  +G AK A+ +F  ML    +PD V +L+VLSACSH+GL EE  +YF  +  +  +
Sbjct: 516 SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGI 575

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P  EHYSC++D+LGR GR D+ + ++  MP +    IW ++L +CR HG+ +L R   E
Sbjct: 576 SPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAE 635

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  +   +   YV++SNI A AG W +   ++K+ R +GL+K  G SWVEV  +++ F 
Sbjct: 636 KLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFS 695

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D T+P+  +I   L  + K M ++ G+       L  + ++ K ESL+ HSE+LAI  
Sbjct: 696 SNDQTNPMITEIKDELERLYKEMDKQ-GYKPDTSCTLQQVDDDIKLESLKYHSERLAIAF 754

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL+    N  PG  IRV KNL  C DCH  IK +SKI+    +VRD++RFH F+ G CSC
Sbjct: 755 ALI----NTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSC 810

Query: 691 GDYW 694
           GDYW
Sbjct: 811 GDYW 814



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 232/507 (45%), Gaps = 45/507 (8%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN---------------- 77
           L   +VK GF       N L+      G +  A A+FD+M  RN                
Sbjct: 21  LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80

Query: 78  ------------------VVSWTALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLS 117
                              V+WT ++  F     A+A   +SLF  M    V P+  T++
Sbjct: 81  QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140

Query: 118 TNIK---ASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
           T +    ASG  ++      +H   +K G    N VV N+++D Y K G +  A R+F  
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           MP +  +T+NAM+ G    G   + L LF  M+  G     FTF++ L     +G +  G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            Q+HG +  +    S    +  SL+DFY KC CL E +++F  + ++  +S++ +I GYA
Sbjct: 261 RQVHGLVARAT---SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYA 317

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
                +  + LFR+++  S        +S++ V      +  GKQIHA    +    +  
Sbjct: 318 WNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDL 377

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V N+++DMY KCG++D A   F     K  V+WT +ITG  ++G  +EA+ LF  M    
Sbjct: 378 VGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAG 437

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           + PD   + + + A S+  ++   ++  S L     M   +   S ++D   + G LDEA
Sbjct: 438 LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMS-SVFSGSALLDMYTKCGCLDEA 496

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHG 500
               + MP + SI+ W  ++SA   +G
Sbjct: 497 LQTFDEMPERNSIS-WNAVISAYAHYG 522



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 118/198 (59%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H  LV +G S + ++ N LIDMY+KCG ++ A   F    ++  VSWTA++ G +Q
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQ 419

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L LFC M  + + P+  T S+ IKAS  L+ +  G Q+H   ++SG   +   
Sbjct: 420 NGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFS 479

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++++DMY+KCG ++EA + FD MP ++ I+WNA+I+ Y   G +   + +F  M  +G 
Sbjct: 480 GSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGF 539

Query: 211 IPDEFTFTSTLKACGSLG 228
            PD  TF S L AC   G
Sbjct: 540 KPDSVTFLSVLSACSHNG 557


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/689 (36%), Positives = 384/689 (55%), Gaps = 22/689 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LER 76
           +L  C     L  G+++H  +V      D  ++N L++MY KCG ++ A  VF KM   R
Sbjct: 151 ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 210

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NV+SW+ +      +GN    L  F  M    +K  +  + T + A    + V++G  IH
Sbjct: 211 NVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIH 270

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGYVLAGY 194
                SGFE   +V N+++ MY +CG + EA ++FD M    + +++WN M++ YV    
Sbjct: 271 SCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDR 330

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               + L+++MQ      D+ T+ S L AC S   VG G  +H  ++      +V  ++ 
Sbjct: 331 GKDAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV--IVG 385

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE---- 310
            +LV  Y KCG   EAR VFD +EQ+S+ISW+++I  Y +   +AEA  LF+Q+ E    
Sbjct: 386 NALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKN 445

Query: 311 ---RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
              + ++ D     +++   AD + +EQGK +   AA      D +V  ++V++Y KCG 
Sbjct: 446 GSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 505

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           I+E   +F+ +  + +V  W  +I  Y + G + EA+ LF +M ++ V PD  +++++L 
Sbjct: 506 IEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 565

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           ACSH+GL ++ + YF+ +  + R   R I+H+ C+ D LGR GRL EA+  +E +PVKP 
Sbjct: 566 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 625

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
              W +LL+ACR H DL+  +EV   LLRL+      YV +SNI+A+   W+   ++RK 
Sbjct: 626 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 685

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              +G+KK  G S +E+ K +H F  GDD HP   +I + L ++  +MK E G+V   K 
Sbjct: 686 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMK-ECGYVPDTKM 744

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LH + E+ KE  L  HSE+LAI L L+   L    G  +RV KNLRVC DCH   K +S
Sbjct: 745 VLHFVDEQEKERLLFSHSERLAIALGLISTPL----GTPLRVTKNLRVCSDCHTATKLIS 800

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KI     VVRD TRFH F+ G CSC DYW
Sbjct: 801 KIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 272/536 (50%), Gaps = 32/536 (5%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACA 68
           +E    A  L+ C++   L  G ++H   VK      +L+L N ++ MYA C     A A
Sbjct: 41  AENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKA 100

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
            FD + +RN+ SWT L+  F  +G +K  L    +M    V+P+  T  T + + G   S
Sbjct: 101 AFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPES 160

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIA 187
           + +G++IH M + S  E +P V N++++MY KCG ++ A R+F  M   +++I+W+ M  
Sbjct: 161 LRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAG 220

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            + L G   + L  FR M   G    +    + L AC S   V  G  IH  +  SGF  
Sbjct: 221 AHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFES 280

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGYAQEENLAEAMELF 305
            +  ++A +++  Y +CG + EAR+VFD +++  + V+SW+ ++  Y   +   +A++L+
Sbjct: 281 EL--LVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLY 338

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           ++++ R+ +V    L S      D  L   G+ +H          +  V N++V MY KC
Sbjct: 339 QRMQLRADKVTYVSLLSACSSAEDVGL---GRVLHKQIVNDELEKNVIVGNALVSMYAKC 395

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-------LDDVEPDG 418
           G   EA  +F++M  +++++WT II+ Y +  L  EA  LF++ML          V+PD 
Sbjct: 396 GSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDA 455

Query: 419 VAYLAVLSACSHSGLVEE-----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           +A++ +L+AC+    +E+      Q     L +DK +       + +V+  G+ G ++E 
Sbjct: 456 LAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVG------TAVVNLYGKCGEIEEG 509

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDNPVNYVMMS 527
           + + + +  +P + +W  +++   V+       E  ++  R  ++G  P ++  +S
Sbjct: 510 RRIFDGVCSRPDVQLWNAMIA---VYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 562


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/666 (35%), Positives = 384/666 (57%), Gaps = 14/666 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++K+G+   L+++N L+D Y K   +  A  +F+ + ER+ V++ AL+ G+ + G
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  ++LF +M     +P EFT +  + A   L  +E G Q+HG  +K  F WN  V N
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++D YSK  R+ EA+++F  MP    I++N ++  Y   G   + L LF+++Q  G   
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEAR 271
             F F + L       ++  G QIH   I +    ++  ++ G SLVD Y KCG   EA 
Sbjct: 399 RNFPFATLLSIAAISLNLDIGRQIHSQTIVTD---AISEILVGNSLVDMYAKCGEFGEAN 455

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           R+F  +  +S + W+++I  Y Q+    + ++LF +++   +  D    +S++   A  A
Sbjct: 456 RIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLA 515

Query: 332 LVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +  GKQ+H++   + SG  ++V   +++VDMY KCG I +A ++F EMPV+N V+W  +
Sbjct: 516 SLTLGKQLHSHI--IGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNAL 573

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+ Y ++G     + LF +M+   ++PD V+ L++L ACSH GLVEE  +YF  +    +
Sbjct: 574 ISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYK 633

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P+ EHY+  +D L R GR DEA+ L+  MP +P   +W ++L++C +H + EL ++  
Sbjct: 634 LVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAA 693

Query: 510 EILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
             L  +    +   YV MSNI+A AG W+   +++K  R +G+KKV   SWVE+  + H 
Sbjct: 694 NQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHV 753

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D THP   +I + L E+E++M ++ G+      ALH++ EE K ESL+ HSE++AI
Sbjct: 754 FTANDKTHPQMREIMKKLDELEEKMVKK-GYKPDSSCALHNVDEEVKVESLKYHSERIAI 812

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
             AL+    +   G  I V KNLR C DCH  IK +SKI++    VRD++RFH F  G C
Sbjct: 813 AFALI----STPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFC 868

Query: 689 SCGDYW 694
           +C DYW
Sbjct: 869 TCRDYW 874



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 258/482 (53%), Gaps = 5/482 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++   N +I  Y K G ++ A  +FD M +R  V+WT L+ G+ QN   +    LF +MG
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              + P+  +L+T +       SV    Q+H   +K G++   VV NS++D Y K   + 
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A ++F+ +P +  +T+NA++ GY   G++ + + LF KMQE G  P EFTF + L A  
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L  +  G Q+HGF++   F ++V   +A +L+DFY K   +VEA ++F  + +   IS+
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNV--FVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           + L+  YA    + E++ELF++L+        F  ++++ + A    ++ G+QIH+    
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
             +  +  V NS+VDMY KCG   EA  +F+++ +++ V WT +I+ Y + GL ++ + L
Sbjct: 429 TDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKL 488

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F +M    +  D   Y +++ AC+    +   ++  S +     +   +   S +VD   
Sbjct: 489 FVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS-NVFSGSALVDMYA 547

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           + G + +A  + + MPV+ S++ W  L+SA   +GD +    + E ++R  G  P +  +
Sbjct: 548 KCGSIKDALQMFQEMPVRNSVS-WNALISAYAQNGDGDCTLRLFEEMVR-SGLQPDSVSL 605

Query: 526 MS 527
           +S
Sbjct: 606 LS 607



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 209/396 (52%), Gaps = 10/396 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +++G Q+HG +VK  F +++ + N L+D Y+K   +  A  +F +M E + +S+  L+  
Sbjct: 315 IEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTC 374

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  NG  K  L LF ++  +      F  +T +  + +  +++ G QIH   + +     
Sbjct: 375 YAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISE 434

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            +VGNS++DMY+KCG   EA R+F  +  +S + W AMI+ YV  G  + GL LF +MQ 
Sbjct: 435 ILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQR 494

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGC 266
                D  T+ S ++AC SL S+  G Q+H  +I SG+   +  V +GS LVD Y KCG 
Sbjct: 495 AKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGY---ISNVFSGSALVDMYAKCGS 551

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           + +A ++F  +  ++ +SW++LI  YAQ  +    + LF ++    LQ D   L S++  
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVS-NSIVDMYLKCGLIDEATELFNEMPVK-NVV 384
            +   LVE+G Q      ++   +       S +DM  + G  DEA +L  +MP + + +
Sbjct: 612 CSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI 671

Query: 385 TWTVIITGYGKHG---LAKEAVG-LFRKMLLDDVEP 416
            W+ ++   G H    LAK+A   LF   +L D  P
Sbjct: 672 MWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 2/315 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L   + +L LD G Q+H   +      ++++ N L+DMYAKCGE   A  +F  + 
Sbjct: 403 FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLA 462

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ V WTA++  ++Q G  +  L LF +M  + +  +  T ++ ++A   L+S+  G Q
Sbjct: 463 IQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQ 522

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   + SG+  N   G++++DMY+KCG I +A +MF  MP ++ ++WNA+I+ Y   G 
Sbjct: 523 LHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGD 582

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D  L LF +M   G  PD  +  S L AC   G V  G Q    + T  +    K    
Sbjct: 583 GDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSM-TRIYKLVPKKEHY 641

Query: 255 GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            S +D   + G   EA ++   +  +   I WSS++      +N   A +   QL    +
Sbjct: 642 ASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKV 701

Query: 314 QVDGFVLSSMMGVFA 328
             D     +M  ++A
Sbjct: 702 LRDAAPYVTMSNIYA 716



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 209/450 (46%), Gaps = 47/450 (10%)

Query: 81  WTALMCGFLQN----GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           WT ++C    N    G+ +  L+L   + ++ +KP    L T       L++ +  + + 
Sbjct: 38  WTCVICLIFTNAGHFGSKQYELTL--SLMNNIIKPCTRNLVT------TLTAPKPHLHVD 89

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV------ 190
              +K+GF  N    N ++  + + G +N A ++FD MP K++ + N MI GY+      
Sbjct: 90  ASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLS 149

Query: 191 --------------------LAGYSDKGLL-----LFRKMQEHGEIPDEFTFTSTLKACG 225
                               + GY+          LF +M  HG  PD  +  + L    
Sbjct: 150 EARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFT 209

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
              SV    Q+H  +I  G  Y    V++ SL+D Y K   L  A ++F+ I ++  +++
Sbjct: 210 EFDSVNEVRQVHSHVIKLG--YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF 267

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++L+ GY++E    EA+ LF +++E   +   F  ++++        +E G+Q+H +  K
Sbjct: 268 NALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVK 327

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                +  V+N+++D Y K   + EA++LF EMP  + +++ V++T Y  +G  KE++ L
Sbjct: 328 CNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLEL 387

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F+++     +     +  +LS  + S  ++  ++  S+      +   +   S +VD   
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS-LVDMYA 446

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           + G   EA  +   + ++ S+  W  ++S+
Sbjct: 447 KCGEFGEANRIFSDLAIQSSVP-WTAMISS 475


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/690 (35%), Positives = 390/690 (56%), Gaps = 20/690 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS       G  +H   +  G   DL ++  L+DMY KC  +  A  +F  M  R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 78  VVSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +V+W A++ G+  +G     ++  L  QM    ++PN  TL   +       ++  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 136 HGMCMKSGFEWNP----------VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           H   +++    N           ++G +++DMY+KCG +  A R+FD MPA++ +TW+A+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I G+VL     +  LLF+ M   G       +  S L+AC SL  +  G Q+H  L  SG
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
                      SL+  Y K G + +A  +FD +  K  +S+S+L+ GY Q     EA  +
Sbjct: 371 V--HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F++++  +++ D   + S++   +  A ++ G+  H          +TS+ N+++DMY K
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ID + ++FN MP +++V+W  +I GYG HGL KEA  LF +M      PDGV ++ +
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+SMP++ 
Sbjct: 549 LSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
            + +W  LL ACRV+ +++LG++V  ++  L  +   N+V++SNI++ AG ++E   +R 
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 668

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + + +G KK  G SW+E++  +H F GGD +HP + +I++ L  +   +K +LG+     
Sbjct: 669 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK-KLGYQPDTS 727

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L D++EE KE++L  HSEKLAI      G L+    K I V KNLRVCGDCH  IK +
Sbjct: 728 FVLQDLEEEEKEKALICHSEKLAIAY----GILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S + +   +VRDA RFH F+ G CSCGD+W
Sbjct: 784 SLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 243/469 (51%), Gaps = 18/469 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC--LSLFCQMGSSSVKPNEFTLST 118
           G ++ A  +FD++   +V ++  L+  +  +    A   L L+ +M    V PN +T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            +KA   L+    G  IH   + +G + +  V  +++DMY KC  + +AA +F  MPA+ 
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 179 LITWNAMIAGYVLAGYSDKGL--LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           L+ WNAM+AGY   G     +  LL  +MQ H   P+  T  + L      G++  GT +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 237 HGFLI--------TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           H + I         S    +   ++  +L+D Y KCG L+ ARRVFD +  ++ ++WS+L
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           I G+     + +A  LF+ +  + L  +    ++S +   A    +  G+Q+HA  AK  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              D +  NS++ MY K GLID+A  LF+EM VK+ V+++ +++GY ++G A+EA  +F+
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           KM   +VEPD    ++++ ACSH   ++  +     +   + +       + ++D   + 
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKC 489

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           GR+D ++ +   MP +  I  W T+++   +HG   LG+E   + L ++
Sbjct: 490 GRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 534



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 13/315 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A +LR C+    L  G QLH  L K G   DL   N L+ MYAK G ++ A A+FD+M 
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++AL+ G++QNG A+    +F +M + +V+P+  T+ + I A   L+++++G  
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  G      + N++IDMY+KCGRI+ + ++F++MP++ +++WN MIAGY + G 
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSV 249
             +   LF +M   G  PD  TF   L AC   G V  G        HG+ +T    + +
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQL 308
                  +VD   + G L EA      +  ++ V  W +L+      +N+    ++ R +
Sbjct: 583 ------CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMI 636

Query: 309 RERSLQVDG-FVLSS 322
           +E   +  G FVL S
Sbjct: 637 QELGPEGTGNFVLLS 651


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/684 (35%), Positives = 378/684 (55%), Gaps = 44/684 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM- 104
           +L+  N L+   A+ G +     +F  + +R+ VS+ AL+ GF + G        +  + 
Sbjct: 76  NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 105 -GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
              + V+P+  T+S  +  +  L     G Q+H   ++ GF      G+ ++DMY+K G 
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195

Query: 164 INEAARMFDVMPAKSL-------------------------------ITWNAMIAGYVLA 192
           I +A R+FD M  K++                               ITW  M+ G    
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G   + L +FR+M+  G   D++TF S L ACG+L ++  G QIH ++  + +  +V   
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNV--F 313

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LVD Y KC  +  A  VF  +  K++ISW+++I+GY Q     EA+ +F +++   
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG 373

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDE 370
           ++ D F L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQFHCLA--LVSGLRPYVTVSNALVTLYGKCGSIED 431

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  LF+EM   + V+WT ++ GY + G AKE + LF KML   V+PDGV ++ VLSACS 
Sbjct: 432 AHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSR 491

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           SGLV++ + YF  +  D  + P  +HY+C++D   R+G L +A+  I+ MP  P    W 
Sbjct: 492 SGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWA 551

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           TLLSACR+ GD+E+G+   E LL+LD  NP +YV++ ++HA  G WN+  +LR+  R + 
Sbjct: 552 TLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQ 611

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G SW++   ++H F   D +HP +  I++ L  +  +M EE G+   V   LHD+
Sbjct: 612 VKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEE-GYKPDVSSVLHDV 670

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            +  K   L  HSEKLAI   L+       P   IR+ KNLRVC DCH   K +SKI   
Sbjct: 671 ADAEKVHMLSHHSEKLAIAFGLI----FVPPEMPIRIVKNLRVCVDCHNATKFISKITGR 726

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRDA RFH+F  G+CSCGD+W
Sbjct: 727 DILVRDAVRFHKFSNGICSCGDFW 750



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 203/399 (50%), Gaps = 43/399 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV----------- 79
           G Q+H  ++++GF       + L+DMYAK G +  A  VFD+M  +NVV           
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223

Query: 80  --------------------SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
                               +WT ++ G  QNG     L +F +M +  V  +++T  + 
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSI 283

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A G L+++E G QIH    ++ +E N  VG++++DMYSKC  +  A  +F  M  K++
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           I+W AMI GY   G  ++ + +F +MQ  G  PD+FT  S + +C +L S+  G Q H  
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403

Query: 240 LITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + SG  PY     ++ +LV  Y KCG + +A R+FD +     +SW++L++GYAQ    
Sbjct: 404 ALVSGLRPY---VTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKA 460

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAAK---VPSGLDTSV 354
            E ++LF ++  + ++ DG     ++   +   LV++G+   H+       VP  LD   
Sbjct: 461 KETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVP--LDDHY 518

Query: 355 SNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITG 392
           +  ++D+Y + G + +A E   +MP   +   W  +++ 
Sbjct: 519 T-CMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSA 556



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 194/424 (45%), Gaps = 69/424 (16%)

Query: 135 IHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           +H + +++    +P  + N+++  Y+  G +  A R+FD MP ++L+T N++++    AG
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 194 YSDKGLLLFRKM---------------------------------QEHGEIPDEFTFTST 220
                  LF  +                                  E G  P   T +  
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           +    +LG    G Q+H  ++  GF           LVD Y K G + +ARRVFD +E K
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGF--GAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGK 209

Query: 281 SV-------------------------------ISWSSLILGYAQEENLAEAMELFRQLR 309
           +V                               I+W++++ G  Q    +EA+++FR++R
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              + +D +   S++      A +E+GKQIHAY  +     +  V +++VDMY KC  + 
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A  +F  M  KN+++WT +I GYG++G  +EAV +F +M  D ++PD     +V+S+C+
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           +   +EE  + F  L     ++P +   + +V   G+ G +++A  L + M     ++ W
Sbjct: 390 NLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-W 447

Query: 490 QTLL 493
             L+
Sbjct: 448 TALV 451



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 120/215 (55%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G Q+H  + +  +  ++ + + L+DMY+KC  +  A AVF +M+ +N+
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTA++ G+ QNG  +  + +F +M    +KP++FTL + I +   L+S+E G Q H +
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A++ GY   G + + 
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKET 463

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           + LF KM   G  PD  TF   L AC   G V  G
Sbjct: 464 IDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG 498



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 4/182 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+M 
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M S  VKP+  T    + A      V+ G +
Sbjct: 441 FHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG-R 499

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
            +   M+   +  P+  +   +ID+YS+ G + +A      MP       W  +++   L
Sbjct: 500 SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRL 559

Query: 192 AG 193
            G
Sbjct: 560 RG 561


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/679 (34%), Positives = 388/679 (57%), Gaps = 16/679 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CS +  L  G  LH  +++     FD++L   LI MYA+C ++  A   FD+M ++ +V+
Sbjct: 68  CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSS---VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           W AL+ G+ +NG+ +  L ++  M S S   +KP+  T S+ + A  V+  +  G +I  
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEA 187

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             + SG+  + +V N++I+MYSKCG +  A ++FD +  + +I WN MI+GY   G + +
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF++M  +   P+  TF   L AC +L  +  G  IH  +   G  Y    VI   L
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG--YESDLVIGNVL 305

Query: 258 VDFYVKCGC-LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++ Y KC   L EAR+VF+ +  + VI+W+ LI+ Y Q     +A+++F+Q++  ++  +
Sbjct: 306 LNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              LS+++   A      QGK +HA  A      D  + NS+++MY +CG +D+   +F 
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFA 425

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K++V+W+ +I  Y +HG ++  +  F ++L + +  D V  ++ LSACSH G+++E
Sbjct: 426 AIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE 485

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             + F  +  D  + P   H+ C+VD L RAGRL+ A+NLI  MP  P    W +LLS C
Sbjct: 486 GVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYV-MMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           ++H D +    V + L  L+ ++  + V ++SN++A+AG W++   +RK    +  +K  
Sbjct: 546 KLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNP 602

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G S++E++  +H F  GD +HP  E I   +  + K+MK+  G+V  ++  LH+++EE K
Sbjct: 603 GCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDA-GYVPDMRMVLHNVKEEEK 661

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEKLAI   L+    +  PG  + + KNLR C DCH   K +S+I+    VVR
Sbjct: 662 EQMLCYHSEKLAIAYGLI----STPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+TRFH FE G CSC DYW
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 245/457 (53%), Gaps = 9/457 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY KCG +  A AVF  +   N VSWT ++  F +NG+ +  L  + +M    ++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
               I        ++ G  +H M +++   E++ ++G ++I MY++C  +  A + FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM---QEHGEIPDEFTFTSTLKACGSLGSVG 231
             K+L+TWNA+IAGY   G     L +++ M      G  PD  TF+S L AC  +G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G +I    + SG  Y+  +++  +L++ Y KCG L  AR+VFD ++ + VI+W+++I G
Sbjct: 181 QGREIEARTVASG--YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           YA++    +A+ELF+++     + +      ++    +   +EQG+ IH    +     D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 352 TSVSNSIVDMYLKC-GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
             + N +++MY KC   ++EA ++F  +  ++V+TW ++I  Y ++G AK+A+ +F++M 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
           L++V P+ +    VLSAC+  G   + +   + L    R K  +   + +++   R G L
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           D+   +  ++  K S+  W TL++A   HG    G E
Sbjct: 418 DDTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTGLE 453



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 211/401 (52%), Gaps = 9/401 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            + +L  CS    +  G ++    V  G++ D ++ N LI+MY+KCG +  A  VFD++ 
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V++W  ++ G+ + G A   L LF +MG +  KPN  T    + A   L  +E G  
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           IH    + G+E + V+GN +++MY+KC   + EA ++F+ +  + +ITWN +I  YV  G
Sbjct: 286 IHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYG 345

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            +   L +F++MQ     P+E T ++ L AC  LG+   G  +H  LI SG       V+
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASG-RCKADVVL 403

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SL++ Y +CG L +   VF  I  KS++SWS+LI  YAQ  +    +E F +L +  L
Sbjct: 404 ENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV-PSGLDTSVSN--SIVDMYLKCGLIDE 370
             D   + S +   +   ++++G Q  ++ + V   GL     +   +VD+  + G ++ 
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQ--SFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521

Query: 371 ATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           A  L ++MP + + V WT +++G   H   K A  +  K+ 
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 144/308 (46%), Gaps = 14/308 (4%)

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG + +A  VF  IE  + +SW+ ++  +A+  +  EA+  +R++    L+ DG +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +GV +    ++QG+ +HA   +      D  +  +++ MY +C  ++ A + F+EM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE---PDGVAYLAVLSACSHSGLVE 435
             K +VTW  +I GY ++G  + A+ +++ M+    E   PD + + + L ACS  G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           + +E  +R          I   + +++   + G L+ A+ + + +  +  IA W T++S 
Sbjct: 181 QGREIEARTVASGYASDSIVQ-NALINMYSKCGSLESARKVFDRLKNRDVIA-WNTMISG 238

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
               G      +  E+  R+  ++P       N+    G    C  L  L + + + +  
Sbjct: 239 YAKQG---AATQALELFQRMGPNDP-----KPNVVTFIGLLTACTNLEDLEQGRAIHRKV 290

Query: 556 GRSWVEVD 563
                E D
Sbjct: 291 KEHGYESD 298


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 379/676 (56%), Gaps = 47/676 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL+  N ++  Y K G ++ A A+F++M E++VVSW A++ GF QNG  +    +F QM 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179

Query: 106 SSSVKPNEFTLSTNIKASGVLSS-VENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                     +   I  +G+LS+ V+NG ++       S  +W  V  N ++  Y +  R
Sbjct: 180 ---------LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +++A  +FD MP +  I+WN MI GY   G   +   LF ++     I D F +T+ +  
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDVFAWTAMVSG 286

Query: 224 CGSLGSVGGGTQIHGFL----------ITSGFPYSVKTVIAGSLVDF------------- 260
               G +   T+I   +          + +G+  S +   A  L D              
Sbjct: 287 FVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMV 346

Query: 261 --YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +CG + +A+ +FD + Q+  ISW+++I GYAQ     EA+ LF +++     ++  
Sbjct: 347 TGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L+  +   A+ A +E GKQ+H    K          N+++ MY KCG I+EA ++F ++
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDI 466

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K++V+W  +I GY +HG  KEA+ LF  M +  ++PD V  + VLSACSH+G V++  
Sbjct: 467 TEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGM 525

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF+ +  +  +    +HY+C++D LGRAGRLDEA NL++SMP  P  A W  LL A R+
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HGD ELG +  E +  ++ DN   YV++SN++A +G W E   +R   R KG+KKV G S
Sbjct: 586 HGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYS 645

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVE+  + H F  GD +HP  E+I+  L E++  +K++ GFV   K  LHD++EE KE  
Sbjct: 646 WVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTKLVLHDVEEEEKEHM 704

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L+ HSEKLA+      G L+  PG+ IRV KNLRVC DCH  IK +SKI +   +VRD+ 
Sbjct: 705 LKYHSEKLAVAF----GILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSN 760

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F  G CSCGDYW
Sbjct: 761 RFHHFSEGSCSCGDYW 776



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 217/456 (47%), Gaps = 53/456 (11%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           +++ ++V W   +  +++ G  ++ LS+F  M   S      T++ N   SG LS+ +  
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS------TVTYNAMISGYLSNNKFD 108

Query: 133 MQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
                 C +  FE  P    +  N ++  Y K G ++ A  +F+ MP K +++WNAM++G
Sbjct: 109 ------CARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSG 162

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +   G+ ++   +F +M     + +E ++   L A    G +    +    L  S   + 
Sbjct: 163 FAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARR----LFDSKMDWE 214

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +  V    L+  YV+   L +AR +FD +  +  ISW+ +I GYAQ   L+EA  LF +L
Sbjct: 215 I--VSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272

Query: 309 RERSL-----QVDGFVLSSMM-------------------GVFADFALVEQGKQIHAYAA 344
             R +      V GFV + M+                    + A +   +Q ++      
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFD 332

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           ++PS  +TS  N++V  Y +CG ID+A  LF+EMP ++ ++W  +I+GY + G ++EA+ 
Sbjct: 333 QMPS-RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF KM  D    +  A    LS+C+    +E  ++   RL         I   + ++   
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALLAMY 450

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           G+ G ++EA ++ E +  K  I  W T+++    HG
Sbjct: 451 GKCGSIEEAFDVFEDITEK-DIVSWNTMIAGYARHG 485



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  LA +L  C++   L+ G QLHG LVK GF    +  N L+ MY KCG +  A  VF+
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E+++VSW  ++ G+ ++G  K  L+LF  M   ++KP++ TL   + A      V+ 
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDK 523

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGY 189
           GM+  + M    G   N      +ID+  + GR++EA  +   MP      TW A++   
Sbjct: 524 GMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGAS 583

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 584 RIHGDTELG 592



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 140/283 (49%), Gaps = 41/283 (14%)

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           TV   +++  Y+       AR+VF+ +  + +ISW+ ++ GY +  NL+ A  LF Q+ E
Sbjct: 91  TVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPE 150

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAY-------------AAKVPSG-------- 349
           +    D    ++M+  FA    VE+ ++I                +A V +G        
Sbjct: 151 K----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRL 206

Query: 350 LDTSVSNSIVDM------YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            D+ +   IV        Y++   +D+A  LF+ MPV++ ++W ++ITGY ++GL  EA 
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF ++ + DV     A+ A++S    +G+++E+   F  +     +      ++ ++  
Sbjct: 267 RLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS-----WNAMIAG 317

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
             ++ ++++A+ L + MP + + + W T+++     G+++  +
Sbjct: 318 YVQSQQIEKARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAK 359



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 42/221 (19%)

Query: 329 DFALVEQGKQIHAYAAK--------VPSGL---DTSVSNSIVDMYLKCGLIDEATELFNE 377
           D  +V+  ++I AY  K        V +G+    T   N+++  YL     D A ++F +
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP +++++W V+++GY K+G    A  LF +M     E D V++ A+LS  + +G VEE+
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQM----PEKDVVSWNAMLSGFAQNGFVEEA 172

Query: 438 QEYF--------------------------SRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
           ++ F                          +R   D +M   I  ++C++    R  RLD
Sbjct: 173 RKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLD 232

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           +A++L + MPV+  I+ W  +++    +G L   R + E L
Sbjct: 233 DARSLFDRMPVRDKIS-WNIMITGYAQNGLLSEARRLFEEL 272


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/667 (37%), Positives = 371/667 (55%), Gaps = 10/667 (1%)

Query: 31  GVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G   H  ++K +       + N L++MY+K    N A  +      R+VV+WTAL+ G +
Sbjct: 25  GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG   + L  F  M   S++PN+FT     KASG L S   G Q+H + +K+G   +  
Sbjct: 85  QNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG S  DMYSK G   EA +MFD MP +++ TWNA ++  VL G  D  L  F + +  G
Sbjct: 145 VGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+  TF + L AC     +  G Q+HGF++ SGF   V   +A  L+DFY KC  +  
Sbjct: 205 WEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVS--VANGLIDFYGKCHQVGC 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           +  +F  I + + +SW S+I+ Y Q +   +A  +F + R+  ++   F++SS++   A 
Sbjct: 263 SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAG 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            +++E GK +H  A K     +  V +++VDMY KCG I++A   F+EMP +N+VTW  +
Sbjct: 323 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 382

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           I GY   G A  AV LF +M      V P+ V ++ VLSACS +G V    E F  +   
Sbjct: 383 IGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGR 442

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             ++P  EHY+C+VD LGRAG +++A   I+ MP++P++++W  LL A ++ G  ELG+ 
Sbjct: 443 YGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKV 502

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + L  LD  +  N+V++SN+ A AG W E   +RK  +  G+KK AG SW+     +H
Sbjct: 503 AADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVH 562

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D +H    +I  +L ++   M E  G++    +AL D++EE K   +  HSEK+A
Sbjct: 563 VFQAKDTSHERNSEIQAMLAKLRGEM-EAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIA 621

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +   L+    +   G  IR+ KNLR+CGDCH  IK +S I+    +VRD   FHRF    
Sbjct: 622 LAFGLI----SIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQ 677

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 678 CSCRDYW 684



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 4/221 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G QLHG +++ GF  D+ + N LID Y KC ++  +  +F  + + N 
Sbjct: 216 LNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPND 275

Query: 79  VSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++  ++QN    KACL +F +     ++P +F +S+ + A   LS +E G  +H 
Sbjct: 276 VSWCSMIVSYVQNDEEEKACL-VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHT 334

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K+    N  VG++++DMY KCG I +A R FD MP ++L+TWNAMI GY   G +D 
Sbjct: 335 LAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADM 394

Query: 198 GLLLFRKMQ--EHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
            + LF +M    H   P+  TF   L AC   GSV  G +I
Sbjct: 395 AVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/696 (35%), Positives = 389/696 (55%), Gaps = 12/696 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           + F +   +      L+ CS  + L  G  +H      G   DL ++  LID+Y +C   
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKA 122
             A  VF KM  R+VV+W A++ G+  +G     ++    M     ++PN  TL + +  
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNP---VVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
                ++  G  IH  C+++  E N    ++G +++DMY+KC ++  A R+F  MP ++ 
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           +TW+A+I G+VL     +   LF+ M   G       +  S L+ C SL  +  GTQ+H 
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            +  SG    +    + SL+  Y K G + EA   FD I  K  IS+ +L+ G  Q    
Sbjct: 332 LIAKSGIHADLTA--SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKA 389

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA  +F++++  +++ D   + S++   +  A ++ GK  H         L+TS+ NS+
Sbjct: 390 EEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSL 449

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG ID + ++F++MP ++VV+W  +I GYG HGL KEA  LF  M      PD 
Sbjct: 450 IDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDD 509

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           V ++ +++ACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+
Sbjct: 510 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQ 569

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           SMP+K  + +W  LL ACR+H +++LG++V  I+ +L  +   N+V++SNI + AG ++E
Sbjct: 570 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDE 629

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
              +R + + KG KK  G SW+E++  +H F GGD +HP +  I+  L  +   +K +LG
Sbjct: 630 AAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK-KLG 688

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +     + L D++EE KE++L  HSEKLAI   ++   LNE   K I V KNLRVCGDCH
Sbjct: 689 YQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVL--SLNED--KTIFVTKNLRVCGDCH 744

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IK ++ +     +VRD  RFH F+ G CSCG++W
Sbjct: 745 TAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 240/461 (52%), Gaps = 18/461 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G++  A  VFD++   +  ++ AL+  +   G   A + L+  M    V PN++T    +
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L  +  G  IH     +G   +  V  ++ID+Y +C R   A  +F  MP + ++
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            WNAM+AGY   G     +     MQ+HG + P+  T  S L      G++  GT IH +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 240 LITSGFPYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + +    + + V+ G+ L+D Y KC  LV A RVF  +  ++ ++WS+LI G+   + +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 299 AEAMELFRQLRERSL-QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA  LF+ +    L  +    ++S + V A  A +  G Q+HA  AK     D + SNS
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY K GLI+EAT  F+E+ VK+ +++  +++G  ++G A+EA  +F+KM   ++EPD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR---IEHYSC--IVDSLGRAGRLDE 472
               ++++ ACSH   ++  +      C+   +  R   +E   C  ++D   + G++D 
Sbjct: 408 IATMVSLIPACSHLAALQHGK------CSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           ++ + + MP +  ++ W T+++   +HG   LG+E   + L
Sbjct: 462 SRQVFDKMPARDVVS-WNTMIAGYGIHG---LGKEATTLFL 498


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/679 (34%), Positives = 388/679 (57%), Gaps = 16/679 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CS +  L  G  LH  +++     FD++L   LI MYA+C ++  A   FD+M ++ +V+
Sbjct: 68  CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVT 127

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSS---VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           W AL+ G+ +NG+ +  L ++  M S S   +KP+  T S+ + A  V+  +  G +I  
Sbjct: 128 WNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEA 187

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             + SG+  + +V N++I+MYSKCG +  A ++FD +  + +I WN MI+GY   G + +
Sbjct: 188 RTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQ 247

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF++M  +   P+  TF   L AC +L  +  G  IH  +   G  Y    VI   L
Sbjct: 248 ALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG--YESDLVIGNVL 305

Query: 258 VDFYVKCGC-LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++ Y KC   L EAR+VF+ +  + VI+W+ LI+ Y Q     +A+++F+Q++  ++  +
Sbjct: 306 LNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              LS+++   A      QGK +HA  A      D  + NS+++MY +CG +D+   +F 
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFA 425

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K++V+W+ +I  Y +HG ++  +  F ++L + +  D V  ++ LSACSH G+++E
Sbjct: 426 AIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKE 485

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             + F  +  D  + P   H+ C+VD L RAGRL+ A+NLI  MP  P    W +LLS C
Sbjct: 486 GVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGC 545

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYV-MMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           ++H D +    V + L  L+ ++  + V ++SN++A+AG W++   +RK    +  +K  
Sbjct: 546 KLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNP 602

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G S++E++  +H F  GD +HP  E I   +  + K+MK+  G+V  ++  LH+++EE K
Sbjct: 603 GCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDA-GYVPDMRMVLHNVKEEEK 661

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEKLAI   L+    +  PG  + + KNLR C DCH   K +S+I+    VVR
Sbjct: 662 EQMLCYHSEKLAIAYGLI----STPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVR 717

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+TRFH FE G CSC DYW
Sbjct: 718 DSTRFHHFENGSCSCKDYW 736



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 245/457 (53%), Gaps = 9/457 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY KCG +  A AVF  +   N VSWT ++  F +NG+ +  L  + +M    ++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
               I        ++ G  +H M +++   E++ ++G ++I MY++C  +  A + FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM---QEHGEIPDEFTFTSTLKACGSLGSVG 231
             K+L+TWNA+IAGY   G     L +++ M      G  PD  TF+S L AC  +G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G +I    + SG  Y+  +++  +L++ Y KCG L  AR+VFD ++ + VI+W+++I G
Sbjct: 181 QGREIEARTVASG--YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           YA++    +A+ELF+++     + +      ++    +   +EQG+ IH    +     D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298

Query: 352 TSVSNSIVDMYLKC-GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
             + N +++MY KC   ++EA ++F  M  ++V+TW ++I  Y ++G AK+A+ +F++M 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
           L++V P+ +    VLSAC+  G   + +   + L    R K  +   + +++   R G L
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           D+   +  ++  K S+  W TL++A   HG    G E
Sbjct: 418 DDTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTGLE 453



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 207/405 (51%), Gaps = 17/405 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            + +L  C+    +  G ++    V  G++ D ++ N LI+MY+KCG +  A  VFD++ 
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V++W  ++ G+ + G A   L LF +MG +  KPN  T    + A   L  +E G  
Sbjct: 226 NRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           IH    + G+E + V+GN +++MY+KC   + EA ++F+ M  + +ITWN +I  YV  G
Sbjct: 286 IHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYG 345

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            +   L +F++MQ     P+E T ++ L AC  LG+   G  +H  LI SG       V+
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASG-RCKADVVL 403

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SL++ Y +CG L +   VF  I  KS++SWS+LI  YAQ  +    +E F +L +  L
Sbjct: 404 ENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQI-------HAYAAKVPSGLDTSVSNSIVDMYLKCG 366
             D   + S +   +   ++++G Q        H  A      L       +VD+  + G
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFL------CMVDLLSRAG 517

Query: 367 LIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
            ++ A  L ++MP + + V WT +++G   H   K A  +  K+ 
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 142/298 (47%), Gaps = 14/298 (4%)

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG + +A  VF  IE  + +SW+ ++  +A+  +  EA+  +R++    L+ DG +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +GV +    ++QG+ +HA   +      D  +  +++ MY +C  ++ A + F+EM
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE---PDGVAYLAVLSACSHSGLVE 435
             K +VTW  +I GY ++G  + A+ +++ M+    E   PD + + + L AC+  G + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           + +E  +R          I   + +++   + G L+ A+ + + +  +  IA W T++S 
Sbjct: 181 QGREIEARTVASGYASDSIVQ-NALINMYSKCGSLESARKVFDRLKNRDVIA-WNTMISG 238

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
               G      +  E+  R+  ++P       N+    G    C  L  L + + + +
Sbjct: 239 YAKQG---AATQALELFQRMGPNDP-----KPNVVTFIGLLTACTNLEDLEQGRAIHR 288


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 372/630 (59%), Gaps = 29/630 (4%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FDK+ +R+V+SW +++ G++ NG  +  L ++ QM    +  +  T+ + +     
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++  G  +H + +KS FE      N+++DMYSKCG ++ A R+F+ M  +++++W +M
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAGY   G+SD  ++L ++M++ G   D    TS L AC   GS+  G  +H ++  +  
Sbjct: 186 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 245

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +L+D Y KCG +  A  VF  +  K +ISW++++                
Sbjct: 246 ASNL--FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------- 287

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  L+ D   ++ ++   A  + +E+GK+IH Y  +     D  V+N++VD+Y+KC
Sbjct: 288 -----GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 342

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G++  A  LF+ +P K++V+WTV+I GYG HG   EA+  F +M    +EPD V+++++L
Sbjct: 343 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 402

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSHSGL+E+   +F  + ND  ++P++EHY+C+VD L R G L +A   IE++P+ P 
Sbjct: 403 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 462

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW  LL  CR++ D+EL  +V E +  L+ +N   YV+++NI+A+A  W E +R+R+ 
Sbjct: 463 ATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREK 522

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
              KGL+K  G SW+E+   ++ F  G++ +HP ++KI  +L +M ++MKEE G+    K
Sbjct: 523 IGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEE-GYFPKTK 581

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           YAL +  E  KE +L  HSEKLA+   L    L   P K IRV KNLRVCGDCHE  K +
Sbjct: 582 YALINADEMQKEMALCGHSEKLAMAFGL----LTLPPRKTIRVTKNLRVCGDCHEMAKFM 637

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK  +   V+RD+ RFH F+ G CSC  +W
Sbjct: 638 SKETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 210/409 (51%), Gaps = 31/409 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K+  L  G  +H   +K  F   +  +N L+DMY+KCG+++GA  VF+KM ERNVVSW
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ ++G +   + L  QM    VK +   +++ + A     S++NG  +H     
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +    N  V N+++DMY+KCG +  A  +F  M  K +I+WN M+               
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------------- 287

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
                  GE+ PD  T    L AC SL ++  G +IHG+++ +G  YS    +A +LVD 
Sbjct: 288 -------GELKPDSRTMACILPACASLSALERGKEIHGYILRNG--YSSDRHVANALVDL 338

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           YVKCG L  AR +FD+I  K ++SW+ +I GY       EA+  F ++R+  ++ D    
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++   +   L+EQG +   Y  K    ++  + +   +VD+  + G + +A +    +
Sbjct: 399 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 457

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P+  +   W  ++ G   +   + A  +  ++   ++EP+   Y  +L+
Sbjct: 458 PIAPDATIWGALLCGCRIYHDIELAEKVAERVF--ELEPENTGYYVLLA 504



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 203/448 (45%), Gaps = 75/448 (16%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+  YA CG++     VFD M ++NV  W  ++  + + G+ K  + LF  M        
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM-------- 53

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
                           VE G++                            R   A+ +FD
Sbjct: 54  ----------------VEKGIE--------------------------GKRSESASELFD 71

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            +  + +I+WN+MI+GYV  G +++GL ++++M   G   D  T  S L  C   G++  
Sbjct: 72  KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  +H   I S F   +    + +L+D Y KCG L  A RVF+ + +++V+SW+S+I GY
Sbjct: 132 GKAVHSLAIKSSFERRIN--FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 189

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
            ++     A+ L +Q+ +  +++D   ++S++   A    ++ GK +H Y        + 
Sbjct: 190 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 249

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V N+++DMY KCG ++ A  +F+ M VK++++W  ++                      
Sbjct: 250 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------G 288

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
           +++PD      +L AC+    +E  +E    +  +     R    + +VD   + G L  
Sbjct: 289 ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGL 347

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHG 500
           A+ L + +P K  ++ W  +++   +HG
Sbjct: 348 ARLLFDMIPSKDLVS-WTVMIAGYGMHG 374



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 27/299 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  LD G  +H  +     + +L + N L+DMYAKCG M GA +VF  M+ +++
Sbjct: 221 LHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI 280

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  ++                       +KP+  T++  + A   LS++E G +IHG 
Sbjct: 281 ISWNTMV---------------------GELKPDSRTMACILPACASLSALERGKEIHGY 319

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V N+++D+Y KCG +  A  +FD++P+K L++W  MIAGY + GY ++ 
Sbjct: 320 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 379

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M++ G  PDE +F S L AC   G +  G +   +++ + F    K      +V
Sbjct: 380 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMV 438

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D   + G L +A +  + +        W +L+ G      +   +EL  ++ ER  +++
Sbjct: 439 DLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC----RIYHDIELAEKVAERVFELE 493



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 67/323 (20%)

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ-- 314
           LV FY  CG L E RRVFD +E+K+V  W+ ++  YA+  +  E++ LF+ + E+ ++  
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 315 -----------------------VDGFVLSSM-------------MGVFADFALV----- 333
                                  + G+V + +             +G+  D A +     
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 334 --------EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                     GK +H+ A K       + SN+++DMY KCG +D A  +F +M  +NVV+
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +I GY + G +  A+ L ++M  + V+ D VA  ++L AC+ SG ++  ++    + 
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI- 240

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL------------- 492
               M   +   + ++D   + G ++ A ++  +M VK  I+ W T+             
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS-WNTMVGELKPDSRTMAC 299

Query: 493 -LSACRVHGDLELGREVGEILLR 514
            L AC     LE G+E+   +LR
Sbjct: 300 ILPACASLSALERGKEIHGYILR 322



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N +   L  + + +A  L  C+    L+ G ++HG +++ G+S D  + N L+D+Y KCG
Sbjct: 284 NTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FD +  +++VSWT ++ G+  +G     ++ F +M  + ++P+E +  + + 
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKS 178
           A      +E G +   + MK+ F   P + +   ++D+ S+ G +++A +  + +P A  
Sbjct: 404 ACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 462

Query: 179 LITWNAMIAG 188
              W A++ G
Sbjct: 463 ATIWGALLCG 472


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/696 (35%), Positives = 386/696 (55%), Gaps = 52/696 (7%)

Query: 42  GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-----LERNVVSWTALMCGFLQNGNAKA 96
           G   D +  N +I  YA+ G+   A   F +M      + NVVSWTAL+ G  QNG    
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345

Query: 97  CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK-SGFEWNPVVGNSII 155
            LS+F +M    VKPN  T+++ + A   LS + +G +IHG C+K    + + +VGNS++
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG---------------------- 193
           D Y+KC  +  A R F ++    L++WNAM+AGY L G                      
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465

Query: 194 -----------YSD--KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
                      Y D    L  F++M   G  P+  T +  L ACG + ++  G +IHG++
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYV 525

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           + +    S  T +  +L+  Y  C  L  A  VF  +  + V+ W+S+I   AQ      
Sbjct: 526 LRNHIELS--TGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSI 358
           A++L R++   +++V+   + S +   +  A + QGK+IH +  +   GLDT   + NS+
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC--GLDTCNFILNSL 641

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY +CG I ++  +F+ MP +++V+W V+I+ YG HG   +AV LF++     ++P+ 
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           + +  +LSACSHSGL+EE  +YF  +  +  M P +E Y+C+VD L RAG+ +E    IE
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
            MP +P+ A+W +LL ACR+H + +L       L  L+  +  NYV+M+NI++ AG W +
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
             ++R L + +G+ K  G SW+EV +++H F  GD +HPL E+I   +  +   +K E+G
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIK-EIG 880

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +V    + L D+ E+ KE SL  HSEK+A+   L+    +   G  +R+ KNLRVCGDCH
Sbjct: 881 YVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI----STTAGTPLRIIKNLRVCGDCH 936

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              K +SK+ K   ++RD  RFH F  GVCSCGDYW
Sbjct: 937 SATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 225/501 (44%), Gaps = 68/501 (13%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L+ C K   L  G Q+H  LV  G      L + L+++Y + G +  A  +FDKM E
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           RNV SWTA+M  +   G+ +  + LF  M +  V+P+ F      KA   L +   G  +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           +   +  GFE N  V  SI+DM+ KCGR++ A R F+ +  K +  WN M++GY   G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA- 254
            K L     M+  G  PD+ T+ +                I G+  +  F  + K  +  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAI---------------ISGYAQSGQFEEASKYFLEM 317

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L DF                  + +V+SW++LI G  Q     EA+ +FR++    ++
Sbjct: 318 GGLKDF------------------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATE 373
            +   ++S +    + +L+  G++IH Y  KV     D  V NS+VD Y KC  ++ A  
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F  +   ++V+W  ++ GY   G  +EA+ L  +M    +EPD + +  +++  +  G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            + + E+F R+                                  SM + P+       L
Sbjct: 480 GKAALEFFQRM---------------------------------HSMGMDPNTTTISGAL 506

Query: 494 SACRVHGDLELGREVGEILLR 514
           +AC    +L+LG+E+   +LR
Sbjct: 507 AACGQVRNLKLGKEIHGYVLR 527



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 199/411 (48%), Gaps = 42/411 (10%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKC------------- 60
           +A ++  C+   LL +G ++HG  +K+     DL++ N L+D YAKC             
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424

Query: 61  ------------------GEMNGACAVFDKM----LERNVVSWTALMCGFLQNGNAKACL 98
                             G    A  +  +M    +E ++++W  L+ GF Q G+ KA L
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
             F +M S  + PN  T+S  + A G + +++ G +IHG  +++  E +  VG+++I MY
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           S C  +  A  +F  +  + ++ WN++I+    +G S   L L R+M       +  T  
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S L AC  L ++  G +IH F+I  G        I  SL+D Y +CG + ++RR+FDL+ 
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGL--DTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           Q+ ++SW+ +I  Y       +A+ LF+Q R   L+ +    ++++   +   L+E+G +
Sbjct: 663 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 722

Query: 339 IHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
            +    K    +D +V     +VD+  + G  +E  E   +MP + N   W
Sbjct: 723 -YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVW 772



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L  C +   L  G ++HG +++        + + LI MY+ C  +  AC+VF ++ 
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VV W +++    Q+G +   L L  +M  S+V+ N  T+ + + A   L+++  G +
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G +    + NS+IDMY +CG I ++ R+FD+MP + L++WN MI+ Y + G+
Sbjct: 622 IHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGF 681

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
               + LF++ +  G  P+  TFT+ L AC   G +  G +    + T    Y++   + 
Sbjct: 682 GMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE---YAMDPAVE 738

Query: 255 --GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
               +VD   + G   E     + +  + +   W SL+
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/736 (34%), Positives = 383/736 (52%), Gaps = 85/736 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H  ++K G   D  L   L+  YA       A  V D + E NV S++ L+  F +  
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                LS F QM +  + P+   L + +KA   LS+++   Q+HG+   SGF+ +  V +
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 153 SIIDMYSKCGRINEAARMFDVM--P---------------------------------AK 177
           S++ MY KC +I +A R+FD M  P                                   
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           +LI+WN MIAG+  +G   + +L+F  M   G  PD  T +S L A G L  +  G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE------------------- 278
           G++I  G        ++ +L+D Y KC C  E  +VFD ++                   
Sbjct: 274 GYVIKQGL--VSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQ 331

Query: 279 ----------------QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
                           + +V+SW+S+I   +Q     EA+ELFR+++   ++ +   +  
Sbjct: 332 VESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPC 391

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++    + A +  GK  H ++ +     D  V ++++DMY KCG I  +   F+ +P KN
Sbjct: 392 LLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           +V W  +I GY  HG AKEA+ +F  M     +PD +++  VLSACS SGL EE   YF+
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFN 511

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            + +   ++ R+EHY+C+V  L RAG+L++A  +I  MPV P   +W  LLS+CRVH ++
Sbjct: 512 SMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNV 571

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
            LG    E L  L+  NP NY+++SNI+A  G WNE  R+R + ++KGL+K  G SW+EV
Sbjct: 572 SLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEV 631

Query: 563 DKEIHFFYGGDDTHP----LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
             ++H    GD +HP    + EK+ ++ MEM+K     LG+   + + L D++E+ KE+ 
Sbjct: 632 KNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKK-----LGYFPEINFVLQDVEEQDKEQI 686

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSEKLA+    V G LN  PG  ++V KNLR+CGDCH  IK +S   +    VRD  
Sbjct: 687 LCGHSEKLAV----VFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTN 742

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSCGDYW
Sbjct: 743 RFHHFKEGACSCGDYW 758



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 35/239 (14%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM----------------- 73
           G+ +HG ++K G   D  +++ LIDMY KC   +    VFD+M                 
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328

Query: 74  ------------------LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
                             +E NVVSWT+++    QNG     L LF +M  + VKPN  T
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVT 388

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +   + A G ++++ +G   H   ++ G   +  VG+++IDMY+KCGRI  +   FD +P
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
            K+L+ WNA+IAGY + G + + + +F  MQ  G+ PD  +FT  L AC   G    G+
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G   H   ++ G S D+ + + LIDMYAKCG +  +   FD +  +N+
Sbjct: 393 LPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNL 452

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHG 137
           V W A++ G+  +G AK  + +F  M  S  KP+  + +  + A       E G    + 
Sbjct: 453 VCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNS 512

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIA 187
           M  K G E        ++ + S+ G++ +A  M   MP       W A+++
Sbjct: 513 MSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 33/197 (16%)

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A + Q +Q HA+  K     DT ++  ++  Y       +AT + + +P  NV +++ +I
Sbjct: 27  ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS--------------------- 429
             + K      A+  F +ML   + PD     + + AC+                     
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 430 HSGLVEESQEYFSRLCN---------DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
               V+ S  +    CN         D+  +P +  +S +V +  R G +DEAK L   M
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 481 ---PVKPSIAIWQTLLS 494
               V+P++  W  +++
Sbjct: 207 GDSGVQPNLISWNGMIA 223


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/695 (36%), Positives = 391/695 (56%), Gaps = 22/695 (3%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++   +++L  C + L L  G  +H  +   G    ++L N LIDMY KCG ++ A  VF
Sbjct: 40  DKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVF 99

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG--VLSS 128
           +   E + VSW +L+ G+++ G+    L L  +M    +  N + L + +KA G    SS
Sbjct: 100 ESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSS 159

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +E G  +HG  +K G + + VVG +++D Y+K G + +A ++F +MP  +++ +NAMIAG
Sbjct: 160 IECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG 219

Query: 189 YV-----LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           ++        ++++ + LF +MQ  G  P EFTF+S LKAC ++ +   G QIH  +   
Sbjct: 220 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI--- 276

Query: 244 GFPYSVKT--VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            F Y++++   I  +LV+ Y   G + +  + F    +  V+SW+SLI+G+ Q       
Sbjct: 277 -FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGG 335

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LF +L     + D F +S M+   A+ A V+ G+QIHAYA K   G  T + NS + M
Sbjct: 336 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 395

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ID A   F E    ++V+W+V+I+   +HG AKEAV LF  M    + P+ + +
Sbjct: 396 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 455

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L VL ACSH GLVEE   YF  +  D  + P ++H +CIVD LGRAGRL EA++ I    
Sbjct: 456 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 515

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
            +    +W++LLSACRVH   + G+ V E ++ L+ +   +YV++ NI+ DAG       
Sbjct: 516 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 575

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R L + +G+KK  G SW+EV   +H F  GD +HP ++ I+  L EM + +K+     Y
Sbjct: 576 IRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK---LDY 632

Query: 602 GVKYALHDIQEESKEESLRV--HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
             +  + D  E   +++  V  HSEKLA+   ++    +      +RV KNLR C  CHE
Sbjct: 633 IDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGII----SLPRSAPVRVMKNLRSCWHCHE 688

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +K  S++     ++RD  RFHRF  G CSCGDYW
Sbjct: 689 TMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 228/439 (51%), Gaps = 19/439 (4%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M +RNVVSW +L+ G+ Q G     ++LF +   S ++ ++FT S  +   G    +  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             IH +   SG     ++ NS+IDMY KCGRI+ A  +F+       ++WN++IAGYV  
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS--LGSVGGGTQIHGFLITSGFPYSVK 250
           G +D+ L L  KM  HG   + +   S LKACGS    S+  G  +HG  +  G    V 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV- 179

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-----EAMELF 305
            V+  +L+D Y K G L +A ++F L+   +V+ ++++I G+ Q E +A     EAM LF
Sbjct: 180 -VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            +++ R ++   F  SS++   +     E GKQIHA   K     D  + N++V++Y   
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G I++  + F+  P  +VV+WT +I G+ ++G  +  + LF ++L    +PD      +L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS----LGRAGRLDEAKNLIESMP 481
           SAC++   V+  ++  +       +K  I +++ I +S      + G +D A N+     
Sbjct: 359 SACANLAAVKSGEQIHAY-----AIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKET 412

Query: 482 VKPSIAIWQTLLSACRVHG 500
             P I  W  ++S+   HG
Sbjct: 413 KNPDIVSWSVMISSNAQHG 431


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/696 (35%), Positives = 389/696 (55%), Gaps = 12/696 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           + F +   +      L+ CS  + L  G  +H      G   DL ++  LID+Y +C   
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKA 122
             A  VF KM  R+VV+W A++ G+  +G     ++    M     ++PN  TL + +  
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNP---VVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
                ++  G  IH  C+++  E N    ++G +++DMY+KC ++  A R+F  MP ++ 
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           +TW+A+I G+VL     +   LF+ M   G       +  S L+ C SL  +  GTQ+H 
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            +  SG    +    + SL+  Y K G + EA   FD I  K  IS+ +L+ G  Q    
Sbjct: 332 LIAKSGIHADLTA--SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKA 389

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA  +F++++  +++ D   + S++   +  A ++ GK  H         L+TS+ NS+
Sbjct: 390 EEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSL 449

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG ID + ++F++MP ++VV+W  +I GYG HGL KEA  LF  M      PD 
Sbjct: 450 IDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDD 509

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           V ++ +++ACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+
Sbjct: 510 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQ 569

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           SMP+K  + +W  LL ACR+H +++LG++V  I+ +L  +   N+V++SNI + AG ++E
Sbjct: 570 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDE 629

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
              +R + + KG KK  G SW+E++  +H F GGD +HP +  I+  L  +   +K +LG
Sbjct: 630 AAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIK-KLG 688

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +     + L D++EE KE++L  HSEKLAI   ++   LNE   K I V KNLRVCGDCH
Sbjct: 689 YQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVL--SLNED--KTIFVTKNLRVCGDCH 744

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IK ++ +     +VRD  RFH F+ G CSCG++W
Sbjct: 745 TAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 240/461 (52%), Gaps = 18/461 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G++  A  VFD++   +  ++ AL+  +   G   A + L+  M    V PN++T    +
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L  +  G  IH     +G   +  V  ++ID+Y +C R   A  +F  MP + ++
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            WNAM+AGY   G     +     MQ+HG + P+  T  S L      G++  GT IH +
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 240 LITSGFPYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + +    + + V+ G+ L+D Y KC  LV A RVF  +  ++ ++WS+LI G+   + +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 299 AEAMELFRQLRERSL-QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA  LF+ +    L  +    ++S + V A  A +  G Q+HA  AK     D + SNS
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY K GLI+EAT  F+E+ VK+ +++  +++G  ++G A+EA  +F+KM   ++EPD
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR---IEHYSC--IVDSLGRAGRLDE 472
               ++++ ACSH   ++  +      C+   +  R   +E   C  ++D   + G++D 
Sbjct: 408 IATMVSLIPACSHLAALQHGK------CSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           ++ + + MP +  ++ W T+++   +HG   LG+E   + L
Sbjct: 462 SRQVFDKMPARDVVS-WNTMIAGYGIHG---LGKEATTLFL 498


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 375/683 (54%), Gaps = 43/683 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQM 104
           +L   N L+   A    +     +F  M ER+ VS+ AL+ GF   G+    + L+   +
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
              SV+P   TLS  I  +  LS    G  +H   ++ GF     VG+ ++DMY+K G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 165 NEAARMFDVMPAKSL-------------------------------ITWNAMIAGYVLAG 193
            +A R+F  M AK++                               ITW  M+ G    G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L +FR+M+  G   D++TF S L ACG+L +   G QIH ++  + +  +V   +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNV--FV 315

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KC  +  A  VF  +  +++ISW+++I+GY Q     EA+  F +++   +
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEA 371
           + D F L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++A
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLA--LVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             LF+EM   + V+WT ++TGY + G AKE + LF KML++ ++PDGV ++ VLSACS +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRA 493

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+  +YF  +  D  + P  +HY+C++D   R+GR  EA+  I+ MP  P    W T
Sbjct: 494 GLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLS+CR+ G++E+G+   E LL  D  NP +YV++ ++HA  G W E   LR+  R + +
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G SW++   ++H F   D +HP + +I++ L  +  +M EE G+   V   LHD+ 
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE-GYKPDVSSVLHDVA 672

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +  K   +  HSEKLAI   L+     E P   IR+ KNLRVC DCH   K +SKI    
Sbjct: 673 DADKVHMISHHSEKLAIAFGLIFVP-QEMP---IRIVKNLRVCVDCHNATKFISKITGRD 728

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRDA RFH+F  G CSCGD+W
Sbjct: 729 ILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 221/510 (43%), Gaps = 103/510 (20%)

Query: 135 IHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT------------ 181
           +H + +K+  +  P  + N ++  Y+K GR+  A R+FD MP  +L T            
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 182 -------------------WNAMIAGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTL 221
                              +NA+I G+   G   + + L+R  ++E    P   T ++ +
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
               +L     G  +H  ++  GF       +   LVD Y K G + +ARRVF  +E K+
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGF--GAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 282 V-------------------------------ISWSSLILGYAQEENLAEAMELFRQLRE 310
           V                               I+W++++ G  Q     EA+++FR++R 
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             + +D +   S++      A  E+GKQIHAY  +     +  V +++VDMY KC  I  
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F  M  +N+++WT +I GYG++  ++EAV  F +M +D ++PD     +V+S+C++
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 431 SGLVEESQEYF-------------------------------SRLCNDKRMKPRIEHYSC 459
              +EE  ++                                 RL ++     ++  ++ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTA 450

Query: 460 IVDSLGRAGRLDEAKNLIESMPV---KPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           +V    + G+  E  +L E M V   KP    +  +LSAC   G +E G +  + + +  
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510

Query: 517 GDNPVN--YVMMSNIHADAGSWNECERLRK 544
              P++  Y  M ++++ +G + E E   K
Sbjct: 511 DIVPIDDHYTCMIDLYSRSGRFKEAEEFIK 540



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 118/215 (54%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C      + G Q+H  + +  +  ++ + + L+DMY+KC  +  A AVF +M  RN+
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTA++ G+ QN  ++  +  F +M    +KP++FTL + I +   L+S+E G Q H +
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A++ GY   G + + 
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           + LF KM  +G  PD  TF   L AC   G V  G
Sbjct: 465 IDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG 499



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M  + +KP+  T    + A      VE G  
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
                M+   +  P+  +   +ID+YS+ GR  EA      MP +     W  +++   L
Sbjct: 502 YFD-SMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 192 AGYSDKG 198
            G  + G
Sbjct: 561 RGNMEIG 567


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/695 (36%), Positives = 391/695 (56%), Gaps = 22/695 (3%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++   +++L  C + L L  G  +H  +   G    ++L N LIDMY KCG ++ A  VF
Sbjct: 119 DKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVF 178

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG--VLSS 128
           +   E + VSW +L+ G+++ G+    L L  +M    +  N + L + +KA G    SS
Sbjct: 179 ESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSS 238

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +E G  +HG  +K G + + VVG +++D Y+K G + +A ++F +MP  +++ +NAMIAG
Sbjct: 239 IECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAG 298

Query: 189 YV-----LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           ++        ++++ + LF +MQ  G  P EFTF+S LKAC ++ +   G QIH  +   
Sbjct: 299 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI--- 355

Query: 244 GFPYSVKT--VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            F Y++++   I  +LV+ Y   G + +  + F    +  V+SW+SLI+G+ Q       
Sbjct: 356 -FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGG 414

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LF +L     + D F +S M+   A+ A V+ G+QIHAYA K   G  T + NS + M
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 474

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ID A   F E    ++V+W+V+I+   +HG AKEAV LF  M    + P+ + +
Sbjct: 475 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 534

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L VL ACSH GLVEE   YF  +  D  + P ++H +CIVD LGRAGRL EA++ I    
Sbjct: 535 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 594

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
            +    +W++LLSACRVH   + G+ V E ++ L+ +   +YV++ NI+ DAG       
Sbjct: 595 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 654

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R L + +G+KK  G SW+EV   +H F  GD +HP ++ I+  L EM + +K+     Y
Sbjct: 655 IRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK---LDY 711

Query: 602 GVKYALHDIQEESKEESLRV--HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
             +  + D  E   +++  V  HSEKLA+   ++    +      +RV KNLR C  CHE
Sbjct: 712 IDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGII----SLPRSAPVRVMKNLRSCWHCHE 767

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +K  S++     ++RD  RFHRF  G CSCGDYW
Sbjct: 768 TMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 259/493 (52%), Gaps = 19/493 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++C ++   L +G   H  ++K  F   L L N+L+ MY KCGE + A  +FD+M +RNV
Sbjct: 26  VQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNV 85

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+ Q G     ++LF +   S ++ ++FT S  +   G    +  G  IH +
Sbjct: 86  VSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHAL 145

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              SG     ++ NS+IDMY KCGRI+ A  +F+       ++WN++IAGYV  G +D+ 
Sbjct: 146 ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEM 205

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGS--LGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           L L  KM  HG   + +   S LKACGS    S+  G  +HG  +  G    V  V+  +
Sbjct: 206 LRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV--VVGTA 263

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-----EAMELFRQLRER 311
           L+D Y K G L +A ++F L+   +V+ ++++I G+ Q E +A     EAM LF +++ R
Sbjct: 264 LLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSR 323

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++   F  SS++   +     E GKQIHA   K     D  + N++V++Y   G I++ 
Sbjct: 324 GMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDG 383

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+  P  +VV+WT +I G+ ++G  +  + LF ++L    +PD      +LSAC++ 
Sbjct: 384 LKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANL 443

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS----LGRAGRLDEAKNLIESMPVKPSIA 487
             V+  ++  +       +K  I +++ I +S      + G +D A N+       P I 
Sbjct: 444 AAVKSGEQIHAY-----AIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKETKNPDIV 497

Query: 488 IWQTLLSACRVHG 500
            W  ++S+   HG
Sbjct: 498 SWSVMISSNAQHG 510



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 213/426 (50%), Gaps = 22/426 (5%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           +  T +  ++ S    S+ +G   H   +K+ F+    + N+++ MY KCG  + A ++F
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D MP +++++WN++I+GY   G+  + + LF++ +      D+FTF++ L  CG    + 
Sbjct: 78  DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  IH  +  SG    V  ++  SL+D Y KCG +  AR VF+  ++   +SW+SLI G
Sbjct: 138 LGRLIHALITVSGLGGPV--LLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVL-SSMMGVFADF-ALVEQGKQIHAYAAKVPSG 349
           Y +  +  E + L  ++    L ++ + L S++    ++F + +E GK +H  A K+   
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK-----HGLAKEAVG 404
           LD  V  +++D Y K G +++AT++F  MP  NVV +  +I G+ +        A EA+ 
Sbjct: 256 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 315

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVE-----ESQEYFSRLCNDKRMKPRIEHYSC 459
           LF +M    ++P    + ++L ACS     E      +Q +   L +D+ +       + 
Sbjct: 316 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG------NA 369

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           +V+    +G +++      S P K  +  W +L+     +G  E G  +   LL   G  
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELL-FSGRK 427

Query: 520 PVNYVM 525
           P  + +
Sbjct: 428 PDEFTI 433


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 392/675 (58%), Gaps = 18/675 (2%)

Query: 28   LDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
            L  G ++H  +++ G  +  + ++N L++MYAKCG ++ AC VF  M  R+ +SW  ++ 
Sbjct: 398  LRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIIT 457

Query: 87   GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
               QNG  +A +  +C M  +S+ P+ F   + + +   L  +  G Q+H   +K G   
Sbjct: 458  ALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYL 517

Query: 147  NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS---DKGLLLFR 203
            +  V N+++ MY +CGR++E   +F+ M A  +++WN+++   V+A       + + +F 
Sbjct: 518  DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMG--VMASSQAPITESVQVFS 575

Query: 204  KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
             M + G +P++ TF + L A   L  +  G QIH  ++  G   +    +  +L+  Y K
Sbjct: 576  NMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGV--TEDNAVDNALMSCYAK 633

Query: 264  CGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
             G +    R+F  +  ++  ISW+S+I GY    +L EAM+    +      +D    S 
Sbjct: 634  SGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSI 693

Query: 323  MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
            ++   A  A +E+G ++HA+  +     D  V +++VDMY KCG ID A+++F+ M  KN
Sbjct: 694  VLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKN 753

Query: 383  VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
              +W  +I+GY +HGL ++A+ +F +M      PD V +++VLSACSH+GLVE   +YF 
Sbjct: 754  EFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYF- 812

Query: 443  RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC---RVH 499
             L  D  + PRIEHYSC++D LGRAG LD+ +  ++ MP+KP+  IW+T+L AC   +  
Sbjct: 813  ELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHR 872

Query: 500  GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
              ++LG E   +LL L+  NPVNYV+ S  HA  G W +  + R   +   +KK AGRSW
Sbjct: 873  AKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSW 932

Query: 560  VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
            V +   +H F  GD +HP T++I++ L  + ++++   G+V   +Y LHD++EE+KEE L
Sbjct: 933  VTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNA-GYVPLTEYVLHDLEEENKEELL 991

Query: 620  RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
            R HSEKLA+   L R       G  IR+ KNLRVCGDCH   + +S+I+    ++RD+ R
Sbjct: 992  RYHSEKLAVAFVLTR----SSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIR 1047

Query: 680  FHRFEGGVCSCGDYW 694
            FH F+ G CSCGDYW
Sbjct: 1048 FHHFKDGKCSCGDYW 1062



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 274/566 (48%), Gaps = 66/566 (11%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  +VK G + DL L N L++ YAK   ++ A  VFD M  RN VSWT L+ G + +G 
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 94  AKACLSLFCQM--GSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFEWNP 148
            +    LF  M       +P  FT  + ++A   SG    +   +Q+HG+  K+ F  N 
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGP-DRLGFAVQVHGLVSKTEFTSNT 205

Query: 149 VVGNSIIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            V N++I MY  C  G    A R+FD  P + LITWNA+++ Y   G +     LFR MQ
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265

Query: 207 EHGE----IPDEFTFTSTLKACG-SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
                    P E TF S + A   S  S+G   Q+   ++ SG   S    +  +LV  +
Sbjct: 266 YDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGC--SSDLYVGSALVSAF 323

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVL 320
            + G L EA+ ++  +++++ ++ + LI G  ++++   A E+F   R+  ++ VD +V+
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV 383

Query: 321 SSMMGVFADFALVEQ----GKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELF 375
             ++   A+F+  EQ    G+++HA+  +        +VSN +V+MY KCG ID+A  +F
Sbjct: 384 --LLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
             M  ++ ++W  IIT   ++G  + A+  +  M  + + P   A ++ LS+C+  GL+ 
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLA 501

Query: 436 ESQEYFSRLCNDKRMKPRIEH--YSCIVDSLGRAGRLDEAKNLIESM------------- 480
             Q+     C+  +    ++    + +V   G  GR+ E   +  SM             
Sbjct: 502 AGQQLH---CDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMG 558

Query: 481 -------PVKPSIAIWQTLLSACRVHGD---------------LELGREVGEILLR--LD 516
                  P+  S+ ++  ++ +  V                  LELG+++  ++L+  + 
Sbjct: 559 VMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVT 618

Query: 517 GDNPVNYVMMSNIHADAGSWNECERL 542
            DN V+  +MS  +A +G  + CERL
Sbjct: 619 EDNAVDNALMS-CYAKSGDVDSCERL 643



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 215/423 (50%), Gaps = 15/423 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   LL  G QLH   VK G   D  ++N L+ MY +CG M+    +F+ M   +V
Sbjct: 491 LSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDV 550

Query: 79  VSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSW ++M G + +  A    S  +F  M  S + PN+ T    + A   LS +E G QIH
Sbjct: 551 VSWNSIM-GVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIH 609

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYS 195
            + +K G   +  V N+++  Y+K G ++   R+F  M   +  I+WN+MI+GY+  G+ 
Sbjct: 610 SVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHL 669

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + +     M    ++ D  TF+  L AC S+ ++  G ++H F + S     V  V+  
Sbjct: 670 QEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDV--VVES 727

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LVD Y KCG +  A +VF  + QK+  SW+S+I GYA+     +A+E+F +++E     
Sbjct: 728 ALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESP 787

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           D     S++   +   LVE+G  +  +      G+   + +   ++D+  + G +D+  E
Sbjct: 788 DHVTFVSVLSACSHAGLVERG--LDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQE 845

Query: 374 LFNEMPVK-NVVTW-TVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
               MP+K N + W TV++        AK  +G     +L ++EP + V Y  VLS+  H
Sbjct: 846 YMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNY--VLSSKFH 903

Query: 431 SGL 433
           + +
Sbjct: 904 AAI 906



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 266/564 (47%), Gaps = 35/564 (6%)

Query: 19  LRCC--SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKML 74
           LR C  S    L + VQ+HG + K  F+ +  + N LI MY  C  G    A  VFD   
Sbjct: 175 LRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTP 234

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM----GSSSVKPNEFTLSTNIKASGVLSSVE 130
            R++++W ALM  + + G+A    +LF  M        ++P E T  + I A+  LSS  
Sbjct: 235 VRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITAT-YLSSCS 293

Query: 131 NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
            G+  Q+    +KSG   +  VG++++  +++ G ++EA  ++  +  ++ +T N +IAG
Sbjct: 294 LGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAG 353

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS----VGGGTQIHGFLITSG 244
            V   + +    +F   ++   +  + T+   L A     +    +  G ++H  ++ +G
Sbjct: 354 LVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAG 412

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             Y  K  ++  LV+ Y KCG + +A RVF L+E +  ISW+++I    Q      AM  
Sbjct: 413 HIYR-KIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMN 471

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           +  +R+ S+    F   S +   A   L+  G+Q+H  A K    LDTSVSN++V MY +
Sbjct: 472 YCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGE 531

Query: 365 CGLIDEATELFNEMPVKNVVTWTVII-TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           CG + E  E+FN M   +VV+W  I+           E+V +F  M+   + P+ V ++ 
Sbjct: 532 CGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN 591

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIES 479
            L+A +   ++E  ++  S +     +K  +   + + ++L     ++G +D  + L   
Sbjct: 592 FLAALTPLSVLELGKQIHSVM-----LKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSR 646

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           M  +     W +++S    +G L+   +   + L +  +  +++   S +       N C
Sbjct: 647 MSGRRDAISWNSMISGYIYNGHLQEAMDC--VCLMMHSEQMMDHCTFSIV------LNAC 698

Query: 540 ERLRKLARSKGLKKVAGRSWVEVD 563
             +  L R   +     RS +E D
Sbjct: 699 ASVAALERGMEMHAFGLRSHLESD 722



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 131/233 (56%), Gaps = 1/233 (0%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N +   LV  +    + L   +   +L+ G Q+H  ++K G + D  ++N L+  YAK G
Sbjct: 576 NMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSG 635

Query: 62  EMNGACAVFDKML-ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           +++    +F +M   R+ +SW +++ G++ NG+ +  +   C M  S    +  T S  +
Sbjct: 636 DVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVL 695

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            A   ++++E GM++H   ++S  E + VV ++++DMYSKCGRI+ A+++F  M  K+  
Sbjct: 696 NACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           +WN+MI+GY   G   K L +F +MQE GE PD  TF S L AC   G V  G
Sbjct: 756 SWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERG 808



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 10/187 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+  +FS+V         L  C+    L+ G+++H   ++     D+++ + L+DMY+KC
Sbjct: 686 MDHCTFSIV---------LNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 736

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G ++ A  VF  M ++N  SW +++ G+ ++G  +  L +F +M  S   P+  T  + +
Sbjct: 737 GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVL 796

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SL 179
            A      VE G+    +    G        + +ID+  + G +++       MP K + 
Sbjct: 797 SACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNT 856

Query: 180 ITWNAMI 186
           + W  ++
Sbjct: 857 LIWRTVL 863


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 375/683 (54%), Gaps = 43/683 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQM 104
           +L   N L+   A    +     +F  M ER+ VS+ AL+ GF   G+    + L+   +
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
              SV+P   TLS  I  +  LS    G  +H   ++ GF     VG+ ++DMY+K G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 165 NEAARMFDVMPAKSL-------------------------------ITWNAMIAGYVLAG 193
            +A R+F  M AK++                               ITW  M+ G    G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L +FR+M+  G   D++TF S L ACG+L ++  G QIH ++  + +  +V   +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV--FV 315

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KC  +  A  VF  +  +++ISW+++I+GY Q     EA+  F +++   +
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEA 371
           + D F L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++A
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLA--LVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             LF+EM   + V+WT ++TGY + G AKE + LF KML + ++PDGV ++ VLSACS +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+  +YF  +  D  + P  +HY+C++D   R+GR  EA+  I+ MP  P    W T
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLS+CR+ G++E+G+   E LL  D  NP +YV++ ++HA  G W E   LR+  R + +
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G SW++   ++H F   D +HP + +I++ L  +  +M EE G+   V   LHD+ 
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE-GYKPDVSSVLHDVA 672

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +  K   +  HSEKLAI   L+     E P   IR+ KNLRVC DCH   K +SKI    
Sbjct: 673 DADKVHMISHHSEKLAIAFGLIFVP-QEMP---IRIVKNLRVCVDCHNATKFISKITGRD 728

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRDA RFH+F  G CSCGD+W
Sbjct: 729 ILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 223/510 (43%), Gaps = 103/510 (20%)

Query: 135 IHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT------------ 181
           +H + +K+  +  P  + N ++  Y+K GR+  A R+FD MP  +L T            
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 182 -------------------WNAMIAGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTL 221
                              +NA+I G+   G   + + L+R  ++E    P   T ++ +
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
               +L     G  +H  ++  GF       +   LVD Y K G + +ARRVF  +E K+
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGF--GAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 282 V-------------------------------ISWSSLILGYAQEENLAEAMELFRQLRE 310
           V                               I+W++++ G  Q     EA+++FR++R 
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             + +D +   S++      A +E+GKQIHAY  +     +  V +++VDMY KC  I  
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F  M  +N+++WT +I GYG++  ++EAV  F +M +D ++PD     +V+S+C++
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 431 SGLVEESQEYF-------------------------------SRLCNDKRMKPRIEHYSC 459
              +EE  ++                                 RL ++     ++  ++ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTA 450

Query: 460 IVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           +V    + G+  E  +L E M    +KP    +  +LSAC   G +E G +  + + +  
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510

Query: 517 GDNPVN--YVMMSNIHADAGSWNECERLRK 544
           G  P++  Y  M ++++ +G + E E   K
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIK 540



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 119/215 (55%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G Q+H  + +  +  ++ + + L+DMY+KC  +  A AVF +M  RN+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTA++ G+ QN  ++  +  F +M    +KP++FTL + I +   L+S+E G Q H +
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A++ GY   G + + 
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           + LF KM  +G  PD  TF   L AC   G V  G
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG 499



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M ++ +KP+  T    + A      VE G  
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
                M+      P+  +   +ID+YS+ GR  EA      MP +     W  +++   L
Sbjct: 502 YFD-SMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 192 AGYSDKG 198
            G  + G
Sbjct: 561 RGNMEIG 567


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/677 (35%), Positives = 383/677 (56%), Gaps = 20/677 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L   S  L L+YG  +H  L+      +L+L   L+DMY KC  +  A  V    LE +V
Sbjct: 223 LLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDV 282

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             WTA++ GF Q+   +  ++ F +M +S V PN FT S  + A   + +++ G QIH  
Sbjct: 283 FLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSR 342

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGR-INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
            + +G E +  VGNS++DMY KC   I +A R F  + + ++I+W ++IAG+   G  ++
Sbjct: 343 VVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEE 402

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + +F  MQ  G  P+ FT ++ L ACG++ S+    ++HG++I +     V  V+  +L
Sbjct: 403 SIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDV--VVGNAL 460

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y   G + +A  V  +++ + VI+++SL     Q  N   A+ +   + +  +++DG
Sbjct: 461 VDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDG 520

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L+S +   A   ++E GKQ+H Y+ K   G   SVSN +VD+Y KCG I +A   F E
Sbjct: 521 FSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLE 580

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +   + V+W  +I G   +G    A+  F  M L  VEPD +  L VL ACSH GLV+  
Sbjct: 581 ITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMG 640

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            +YF  +     ++P+++HY C+VD LGRAGRL+EA N+IE+MP KP   I++TLL AC+
Sbjct: 641 LDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACK 700

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG++ LG  +    L LD  +P  YV+++N++ D+G     E+ R++ R +G++K  G+
Sbjct: 701 LHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQ 760

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+E    +H F  GD +HP   KIH+ +  +  + + +     G+ Y         +  
Sbjct: 761 SWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQ-----GIWY--------QENR 807

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L  HSEKLA+   L+    +  P   IR+ KN+R+C DCH+FI  +++++    +VRD 
Sbjct: 808 ALAHHSEKLAVAFGLI----STPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDG 863

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC  YW
Sbjct: 864 NRFHSFKKGECSCRGYW 880



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 261/499 (52%), Gaps = 7/499 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           E   L D +  C+   + D G+ +H  ++KMGF  D+ L+N+L+ +Y KC  +  A  +F
Sbjct: 15  EYSLLKDIVSFCNSRSVRD-GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLF 73

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M  R+V SWT LM  + + GN +  L LF  M  S   PNEFTLST +++   L    
Sbjct: 74  DEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFN 133

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
           +G +   +  KSGF+ NPV+G+++ID YSKCG   EA R+F+ M    +++W  M++ +V
Sbjct: 134 HGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFV 193

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            AG   + L L+ +M + G  P+EFTF   L A   LG +  G  +H  L+   +   + 
Sbjct: 194 EAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMM--WRIELN 250

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            V+  +LVD Y KC  + +A +V  L  +  V  W+++I G+ Q     EA+  F ++  
Sbjct: 251 LVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET 310

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC-GLID 369
             +  + F  S ++   +    ++ GKQIH+         D SV NS+VDMY+KC  +I+
Sbjct: 311 SGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE 370

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A   F  +   NV++WT +I G+ +HGL +E++ +F  M    V P+      +L AC 
Sbjct: 371 DAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACG 430

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
               + ++++    +  +      +   + +VD+    G +D+A + + SM     +  +
Sbjct: 431 TIKSLTQTRKLHGYIIKNNADNDVVVG-NALVDAYAGLGMVDDAWH-VTSMMKHRDVITY 488

Query: 490 QTLLSACRVHGDLELGREV 508
            +L +     G+ E+   +
Sbjct: 489 TSLATRINQTGNHEMALNI 507



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 11/233 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C     L    +LHG ++K     D+++ N L+D YA  G ++ A  V   M 
Sbjct: 422 LSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMK 481

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V+++T+L     Q GN +  L++   M    V+ + F+L++ + A+  +  +E G Q
Sbjct: 482 HRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQ 541

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +KSG      V N ++D+Y KCG I++A R F  +     ++WN +I G    G+
Sbjct: 542 LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGH 601

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
               L  F  M+  G  PD+ T    L AC            HG L+  G  Y
Sbjct: 602 VSSALSAFEDMRLAGVEPDQITCLLVLYACS-----------HGGLVDMGLDY 643


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/689 (34%), Positives = 391/689 (56%), Gaps = 21/689 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C +   L     LHG +VK G S D+ +   L++ Y +CG    A ++FD+M E+NV
Sbjct: 85  LHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNV 144

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WTAL+ G+  N      L +F +M  +   P+ +TL   + A    ++ + G Q+HG 
Sbjct: 145 VTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGY 204

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYSDK 197
            +K        +GNS+  MY+K G +  A R F ++P K++ITW  MI+       Y++ 
Sbjct: 205 TIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTEL 264

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GL LF  M   G +P+EFT TS +  CG+   +  G Q+  F    G   ++   +  S 
Sbjct: 265 GLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIP--VKNST 322

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFR 306
           +  Y++ G   EA R F+ ++  S+I+W+++I GYAQ    A           +A+++FR
Sbjct: 323 MYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFR 382

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            L+  +++ D F  SS++ V +    +EQG+QIHA   K     D  V++++V+MY KCG
Sbjct: 383 NLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCG 442

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            I++AT+ F EM ++ +VTWT +I+GY +HG  +EA+ LF  M    V P+ + ++ VLS
Sbjct: 443 CIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLS 502

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACS++GL E+++ YF  +  + +++P ++HY C+VD   R GRLD+A   I     +P+ 
Sbjct: 503 ACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNE 562

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
           AIW +L++ CR HG++EL     + L+ L       YV++ N++     W++  R+RKL 
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLM 622

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           + +GL  +  RSW+ +  +++FF   D TH L+++++Q+L  + ++ K  +G+       
Sbjct: 623 KQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAK-TIGYEPYQSAE 681

Query: 607 LHDIQEESKEE--SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           L D +++ K    S+R HSE+LA+ L L    L   PG  +RV KN+ +C DCH  IK  
Sbjct: 682 LSDSEDDKKPPAGSVRHHSERLAVALGL----LQTPPGATVRVTKNITMCRDCHSSIKFF 737

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           S +     VVRD+ R H+F+ G CSCGD+
Sbjct: 738 SLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G+      +   L  C   GS+GG   +HG ++ +G   S    +A SLV+ Y++C
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTG--TSADMFVATSLVNAYMRC 126

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G   +AR +FD + +K+V++W++LI GY     L EA+E+F ++ E       + L +M+
Sbjct: 127 GASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAML 186

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              +     + G Q+H Y  K  +   TS+ NS+  MY K G ++ A   F  +P KNV+
Sbjct: 187 NACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVI 246

Query: 385 TWTVIITGYGK-HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS---GLVEESQEY 440
           TWT +I+   +     +  + LF  ML+D V P+     +V+S C       L ++ Q +
Sbjct: 247 TWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
               C     +  I   +  +    R G  DEA    E M    SI  W  ++S
Sbjct: 307 ----CFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMD-DVSIITWNAMIS 355


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/678 (35%), Positives = 392/678 (57%), Gaps = 22/678 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   ++ G   +  + N L+ MY K G++  +  +      R++V+W  ++    Q
Sbjct: 134 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 192

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPV 149
           N      L    +M    V+P+EFT+S+ + A   L  +  G ++H   +K+G  + N  
Sbjct: 193 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 252

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
           VG++++DMY  C ++    R+FD M  + +  WNAMIAGY    +  + LLLF  M+E  
Sbjct: 253 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 312

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G + +  T    + AC   G+      IHGF++  G        +  +L+D Y + G + 
Sbjct: 313 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD--RFVQNTLMDMYSRLGKID 370

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR--ER---------SLQVDG 317
            A R+F  +E + +++W+++I GY   E+  +A+ L  +++  ER         SL+ + 
Sbjct: 371 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 430

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L +++   A  + + +GK+IHAYA K     D +V +++VDMY KCG +  + ++F++
Sbjct: 431 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 490

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P KNV+TW VII  YG HG  +EA+ L R M++  V+P+ V +++V +ACSHSG+V+E 
Sbjct: 491 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 550

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA-IWQTLLSAC 496
              F  +  D  ++P  +HY+C+VD LGRAGR+ EA  L+  MP   + A  W +LL A 
Sbjct: 551 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 610

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H +LE+G    + L++L+ +   +YV+++NI++ AG W++   +R+  + +G++K  G
Sbjct: 611 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 670

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW+E   E+H F  GD +HP +EK+   L  + +RM++E G+V      LH+++E+ KE
Sbjct: 671 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKE 729

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLAI      G LN  PG +IRV KNLRVC DCH   K +SKI+    ++RD
Sbjct: 730 ILLCGHSEKLAIAF----GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 785

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFHRF+ G CSCGDYW
Sbjct: 786 VRRFHRFKNGTCSCGDYW 803



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 246/501 (49%), Gaps = 23/501 (4%)

Query: 28  LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++ G Q+H  + K G+  D + + N L+++Y KCG+      VFD++ ERN VSW +L+ 
Sbjct: 26  MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 85

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSG 143
                   +  L  F  M   +V+P+ FTL + + A   L   E    G Q+H   ++ G
Sbjct: 86  SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 145

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            E N  + N+++ MY K G++  +  +      + L+TWN +++         + L   R
Sbjct: 146 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 204

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G  PDEFT +S L AC  L  +  G ++H + + +G      + +  +LVD Y  
Sbjct: 205 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCN 263

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSS 322
           C  ++  RRVFD +  + +  W+++I GY+Q E+  EA+ LF  + E + L  +   ++ 
Sbjct: 264 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 323

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++          + + IH +  K     D  V N+++DMY + G ID A  +F +M  ++
Sbjct: 324 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 383

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-----------VEPDGVAYLAVLSACSHS 431
           +VTW  +ITGY      ++A+ L  KM   +           ++P+ +  + +L +C+  
Sbjct: 384 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 443

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             + + +E  +    +  +   +   S +VD   + G L  ++ + + +P K ++  W  
Sbjct: 444 SALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 501

Query: 492 LLSACRVHGDLELGREVGEIL 512
           ++ A  +HG+   G+E  ++L
Sbjct: 502 IIMAYGMHGN---GQEAIDLL 519



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 11/392 (2%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEA 167
           +KP+ +     +KA   L  +E G QIH    K G+  + V V N+++++Y KCG     
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            ++FD +  ++ ++WN++I+        +  L  FR M +    P  FT  S + AC +L
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 228 GSVGG---GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               G   G Q+H + +  G    + + I  +LV  Y K G L  ++ +      + +++
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++++    Q E L EA+E  R++    ++ D F +SS++   +   ++  GK++HAYA 
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242

Query: 345 KVPSGLDTS-VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
           K  S  + S V +++VDMY  C  +     +F+ M  + +  W  +I GY ++   KEA+
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302

Query: 404 GLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
            LF  M     +  +      V+ AC  SG     +     +      + R    + ++D
Sbjct: 303 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMD 361

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              R G++D A  +   M  +  +  W T+++
Sbjct: 362 MYSRLGKIDIAMRIFGKMEDR-DLVTWNTMIT 392



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 165/316 (52%), Gaps = 15/316 (4%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  L++    +A  +  C ++        +HG +VK G   D  + N L+DMY++ G+++
Sbjct: 311 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 370

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM---------GSS--SVKPNE 113
            A  +F KM +R++V+W  ++ G++ + + +  L L  +M         G+S  S+KPN 
Sbjct: 371 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 430

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
            TL T + +   LS++  G +IH   +K+    +  VG++++DMY+KCG +  + ++FD 
Sbjct: 431 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 490

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           +P K++ITWN +I  Y + G   + + L R M   G  P+E TF S   AC   G V  G
Sbjct: 491 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 550

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILG 291
            +I  +++   +     +     +VD   + G + EA ++ +++ +      +WSSL LG
Sbjct: 551 LRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL-LG 608

Query: 292 YAQEENLAEAMELFRQ 307
            ++  N  E  E+  Q
Sbjct: 609 ASRIHNNLEIGEIAAQ 624



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 27/253 (10%)

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT-SVSNSIVDMYLKCGLIDEA 371
           ++ D +   +++   AD   +E GKQIHA+  K   G+D+ +V+N++V++Y KCG     
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH- 430
            ++F+ +  +N V+W  +I+        + A+  FR ML ++VEP     ++V++ACS+ 
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 431 ---SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVK 483
               GL+   Q +   L        + E  S I+++L    G+ G+L  +K L+ S   +
Sbjct: 126 PMPEGLMMGKQVHAYGL-------RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178

Query: 484 PSIAIWQTLLSA-CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
             +  W T+LS+ C+    LE    + E++  L+G  P  + + S + A       C  L
Sbjct: 179 -DLVTWNTVLSSLCQNEQLLEALEYLREMV--LEGVEPDEFTISSVLPA-------CSHL 228

Query: 543 RKLARSKGLKKVA 555
             L   K L   A
Sbjct: 229 EMLRTGKELHAYA 241


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/678 (35%), Positives = 392/678 (57%), Gaps = 22/678 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   ++ G   +  + N L+ MY K G++  +  +      R++V+W  ++    Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPV 149
           N      L    +M    V+P+EFT+S+ + A   L  +  G ++H   +K+G  + N  
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
           VG++++DMY  C ++    R+FD M  + +  WNAMIAGY    +  + LLLF  M+E  
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G + +  T    + AC   G+      IHGF++  G        +  +L+D Y + G + 
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD--RFVQNTLMDMYSRLGKID 457

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR--ER---------SLQVDG 317
            A R+F  +E + +++W+++I GY   E+  +A+ L  +++  ER         SL+ + 
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L +++   A  + + +GK+IHAYA K     D +V +++VDMY KCG +  + ++F++
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P KNV+TW VII  YG HG  +EA+ L R M++  V+P+ V +++V +ACSHSG+V+E 
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA-IWQTLLSAC 496
              F  +  D  ++P  +HY+C+VD LGRAGR+ EA  L+  MP   + A  W +LL A 
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 697

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H +LE+G    + L++L+ +   +YV+++NI++ AG W++   +R+  + +G++K  G
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 757

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW+E   E+H F  GD +HP +EK+   L  + +RM++E G+V      LH+++E+ KE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKE 816

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLAI      G LN  PG +IRV KNLRVC DCH   K +SKI+    ++RD
Sbjct: 817 ILLCGHSEKLAIAF----GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFHRF+ G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 247/501 (49%), Gaps = 23/501 (4%)

Query: 28  LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++ G Q+H  + K G+  D + + N L+++Y KCG+      VFD++ ERN VSW +L+ 
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSG 143
                   +  L  F  M   +V+P+ FTL + + A   L   E    G Q+H   ++ G
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            E N  + N+++ MY K G++  +  +      + L+TWN +++         + L   R
Sbjct: 233 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G  PDEFT +S L AC  L  +  G ++H + + +G      + +  +LVD Y  
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCN 350

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSS 322
           C  ++  RRVFD +  + +  W+++I GY+Q E+  EA+ LF  + E + L  +   ++ 
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++          + + IH +  K     D  V N+++DMY + G ID A  +F +M  ++
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKML-LD----------DVEPDGVAYLAVLSACSHS 431
           +VTW  +ITGY      ++A+ L  KM  L+           ++P+ +  + +L +C+  
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             + + +E  +    +  +   +   S +VD   + G L  ++ + + +P K ++  W  
Sbjct: 531 SALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588

Query: 492 LLSACRVHGDLELGREVGEIL 512
           ++ A  +HG+   G+E  ++L
Sbjct: 589 IIMAYGMHGN---GQEAIDLL 606



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 205/438 (46%), Gaps = 12/438 (2%)

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           ++GA ++F     R+   W  L+   +++   +  +  +  M    +KP+ +     +KA
Sbjct: 48  VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
              L  +E G QIH    K G+  + V V N+++++Y KCG      ++FD +  ++ ++
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHG 238
           WN++I+        +  L  FR M +    P  FT  S + AC +L    G   G Q+H 
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           + +  G    + + I  +LV  Y K G L  ++ +      + +++W++++    Q E L
Sbjct: 227 YGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNS 357
            EA+E  R++    ++ D F +SS++   +   ++  GK++HAYA K  S  + S V ++
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEP 416
           +VDMY  C  +     +F+ M  + +  W  +I GY ++   KEA+ LF  M     +  
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           +      V+ AC  SG     +     +      + R    + ++D   R G++D A  +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRI 462

Query: 477 IESMPVKPSIAIWQTLLS 494
              M  +  +  W T+++
Sbjct: 463 FGKMEDR-DLVTWNTMIT 479



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 165/316 (52%), Gaps = 15/316 (4%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  L++    +A  +  C ++        +HG +VK G   D  + N L+DMY++ G+++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM---------GSS--SVKPNE 113
            A  +F KM +R++V+W  ++ G++ + + +  L L  +M         G+S  S+KPN 
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
            TL T + +   LS++  G +IH   +K+    +  VG++++DMY+KCG +  + ++FD 
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           +P K++ITWN +I  Y + G   + + L R M   G  P+E TF S   AC   G V  G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILG 291
            +I  +++   +     +     +VD   + G + EA ++ +++ +      +WSSL LG
Sbjct: 638 LRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL-LG 695

Query: 292 YAQEENLAEAMELFRQ 307
            ++  N  E  E+  Q
Sbjct: 696 ASRIHNNLEIGEIAAQ 711



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 27/288 (9%)

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           + +S   W  L+    +   L EA+  +  +    ++ D +   +++   AD   +E GK
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 338 QIHAYAAKVPSGLDT-SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           QIHA+  K   G+D+ +V+N++V++Y KCG      ++F+ +  +N V+W  +I+     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH----SGLVEESQEYFSRLCNDKRMKP 452
              + A+  FR ML ++VEP     ++V++ACS+     GL+   Q +   L        
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL-------R 230

Query: 453 RIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHGDLELGRE 507
           + E  S I+++L    G+ G+L  +K L+ S   +  +  W T+LS+ C+    LE    
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEY 289

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           + E++  L+G  P  + + S + A       C  L  L   K L   A
Sbjct: 290 LREMV--LEGVEPDEFTISSVLPA-------CSHLEMLRTGKELHAYA 328


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/678 (35%), Positives = 392/678 (57%), Gaps = 22/678 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   ++ G   +  + N L+ MY K G++  +  +      R++V+W  ++    Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPV 149
           N      L    +M    V+P+EFT+S+ + A   L  +  G ++H   +K+G  + N  
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
           VG++++DMY  C ++    R+FD M  + +  WNAMIAGY    +  + LLLF  M+E  
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G + +  T    + AC   G+      IHGF++  G        +  +L+D Y + G + 
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL--DRDRFVQNTLMDMYSRLGKID 457

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR--ER---------SLQVDG 317
            A R+F  +E + +++W+++I GY   E+  +A+ L  +++  ER         SL+ + 
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L +++   A  + + +GK+IHAYA K     D +V +++VDMY KCG +  + ++F++
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P KNV+TW VII  YG HG  +EA+ L R M++  V+P+ V +++V +ACSHSG+V+E 
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA-IWQTLLSAC 496
              F  +  D  ++P  +HY+C+VD LGRAGR+ EA  L+  MP   + A  W +LL A 
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 697

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H +LE+G    + L++L+ +   +YV+++NI++ AG W++   +R+  + +G++K  G
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 757

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW+E   E+H F  GD +HP +EK+   L  + +RM++E G+V      LH+++E+ KE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKE 816

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLAI      G LN  PG +IRV KNLRVC DCH   K +SKI+    ++RD
Sbjct: 817 ILLCGHSEKLAIAF----GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFHRF+ G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 246/501 (49%), Gaps = 23/501 (4%)

Query: 28  LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++ G Q+H  + K G+  D + + N L+++Y KCG+      VFD++ ERN VSW +L+ 
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSG 143
                   +  L  F  M   +V+P+ FTL + + A   L   E    G Q+H   ++ G
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            E N  + N+++ MY K G++  +  +      + L+TWN +++         + L   R
Sbjct: 233 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G  PDEFT +S L AC  L  +  G ++H + + +G      + +  +LVD Y  
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCN 350

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSS 322
           C  ++  RRVFD +  + +  W+++I GY+Q E+  EA+ LF  + E + L  +   ++ 
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++          + + IH +  K     D  V N+++DMY + G ID A  +F +M  ++
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-----------VEPDGVAYLAVLSACSHS 431
           +VTW  +ITGY      ++A+ L  KM   +           ++P+ +  + +L +C+  
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             + + +E  +    +  +   +   S +VD   + G L  ++ + + +P K ++  W  
Sbjct: 531 SALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588

Query: 492 LLSACRVHGDLELGREVGEIL 512
           ++ A  +HG+   G+E  ++L
Sbjct: 589 IIMAYGMHGN---GQEAIDLL 606



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 205/438 (46%), Gaps = 12/438 (2%)

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           ++GA ++F     R+   W  L+   +++   +  +  +  M    +KP+ +     +KA
Sbjct: 48  VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
              L  +E G QIH    K G+  + V V N+++++Y KCG      ++FD +  ++ ++
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHG 238
           WN++I+        +  L  FR M +    P  FT  S + AC +L    G   G Q+H 
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           + +  G    + + I  +LV  Y K G L  ++ +      + +++W++++    Q E L
Sbjct: 227 YGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNS 357
            EA+E  R++    ++ D F +SS++   +   ++  GK++HAYA K  S  + S V ++
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEP 416
           +VDMY  C  +     +F+ M  + +  W  +I GY ++   KEA+ LF  M     +  
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           +      V+ AC  SG     +     +      + R    + ++D   R G++D A  +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRI 462

Query: 477 IESMPVKPSIAIWQTLLS 494
              M  +  +  W T+++
Sbjct: 463 FGKMEDR-DLVTWNTMIT 479



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 165/316 (52%), Gaps = 15/316 (4%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  L++    +A  +  C ++        +HG +VK G   D  + N L+DMY++ G+++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM---------GSS--SVKPNE 113
            A  +F KM +R++V+W  ++ G++ + + +  L L  +M         G+S  S+KPN 
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
            TL T + +   LS++  G +IH   +K+    +  VG++++DMY+KCG +  + ++FD 
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           +P K++ITWN +I  Y + G   + + L R M   G  P+E TF S   AC   G V  G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILG 291
            +I  +++   +     +     +VD   + G + EA ++ +++ +      +WSSL LG
Sbjct: 638 LRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL-LG 695

Query: 292 YAQEENLAEAMELFRQ 307
            ++  N  E  E+  Q
Sbjct: 696 ASRIHNNLEIGEIAAQ 711



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 27/288 (9%)

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           + +S   W  L+    +   L EA+  +  +    ++ D +   +++   AD   +E GK
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 338 QIHAYAAKVPSGLDT-SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           QIHA+  K   G+D+ +V+N++V++Y KCG      ++F+ +  +N V+W  +I+     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH----SGLVEESQEYFSRLCNDKRMKP 452
              + A+  FR ML ++VEP     ++V++ACS+     GL+   Q +   L        
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL-------R 230

Query: 453 RIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHGDLELGRE 507
           + E  S I+++L    G+ G+L  +K L+ S   +  +  W T+LS+ C+    LE    
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEY 289

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           + E++  L+G  P  + + S + A       C  L  L   K L   A
Sbjct: 290 LREMV--LEGVEPDEFTISSVLPA-------CSHLEMLRTGKELHAYA 328


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/704 (34%), Positives = 405/704 (57%), Gaps = 26/704 (3%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF+LVS    LA S     + LL+  G Q+H   ++ G   +  + N L+ MY K G++ 
Sbjct: 195 SFTLVS--VALACSNFPMPEGLLM--GKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLA 249

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            +  +      R++V+W  ++    QN      L    +M    V+P+ FT+S+ + A  
Sbjct: 250 SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 125 VLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
            L  +  G ++H   +K+G  + N  VG++++DMY  C ++    R+FD M  + +  WN
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWN 369

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           AMI GY    Y ++ LLLF +M+E  G + +  T    + AC   G+      IHGF++ 
Sbjct: 370 AMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVK 429

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G        +  +L+D Y + G +  A+R+F  +E + +++W+++I GY   E   +A+
Sbjct: 430 RGL--DRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDAL 487

Query: 303 ELFR--QLRER---------SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
            +    Q+ ER         SL+ +   L +++   A  + + +GK+IHAYA K     D
Sbjct: 488 LMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 547

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            +V +++VDMY KCG +  + ++F+++P++NV+TW VI+  YG HG +++A+ + R M++
Sbjct: 548 VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMV 607

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V+P+ V +++V +ACSHSG+V E  + F  +  D  ++P  +HY+C+VD LGRAGR+ 
Sbjct: 608 QGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVK 667

Query: 472 EAKNLIESMPVKPSIA-IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
           EA  LI  +P     A  W +LL ACR+H +LE+G    + L++L+ +   +YV+++NI+
Sbjct: 668 EAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 727

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           + AG W +   +R+  +++G++K  G SW+E   E+H F  GD +HP +EK+   L  + 
Sbjct: 728 SSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLW 787

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
           +RM++E G++      LH+++E+ KE  L  HSEKLAI      G LN  PG +IRV KN
Sbjct: 788 ERMRKE-GYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAF----GILNTSPGTIIRVAKN 842

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LRVC DCH   K +SK++    ++RD  RFH F+ G CSCGDYW
Sbjct: 843 LRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 237/490 (48%), Gaps = 20/490 (4%)

Query: 28  LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +D G Q+H  + K G+  D + + N L+++Y KCG+      VFD++ ERN VSW +L+ 
Sbjct: 109 MDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 168

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSG 143
                   +  L  F  M    V+P+ FTL +   A       E    G Q+H   ++ G
Sbjct: 169 SLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG 228

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            E N  + N+++ MY K G++  +  +      + L+TWN +++         + L   R
Sbjct: 229 -ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLR 287

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G  PD FT +S L AC  L  +  G ++H + + +G      + +  +LVD Y  
Sbjct: 288 EMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCN 346

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSS 322
           C  ++   RVFD +  + +  W+++I GYAQ E   EA+ LF ++ E + L  +   ++ 
Sbjct: 347 CKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAG 406

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++          + + IH +  K     D  V N+++DMY + G ID A  +F +M  ++
Sbjct: 407 VVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRD 466

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-----------VEPDGVAYLAVLSACSHS 431
           +VTW  IITGY      ++A+ +  KM + +           ++P+ +  + +L +C+  
Sbjct: 467 LVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAAL 526

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             + + +E  +    +  +   +   S +VD   + G L  ++ + + +P++ ++  W  
Sbjct: 527 SALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNV 584

Query: 492 LLSACRVHGD 501
           ++ A  +HG+
Sbjct: 585 IVMAYGMHGN 594



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 221/492 (44%), Gaps = 14/492 (2%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W  L+   +++   +  +  +  M    +KP+ F     +KA   L  ++ G QIH    
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 141 KSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           K G+  + V V N+++++Y KCG      ++FD +  ++ ++WN++I+        +  L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKTVIAGS 256
             FR M +    P  FT  S   AC +     G   G Q+H + +  G    + + I  +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG---ELNSFIINT 237

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LV  Y K G L  ++ +    E + +++W++++    Q E   EA+E  R++    ++ D
Sbjct: 238 LVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEATELF 375
           GF +SS++   +   ++  GK++HAYA K  S  + S V +++VDMY  C  +     +F
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF 357

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLV 434
           + M  + +  W  +ITGY ++   +EA+ LF +M     +  +      V+ AC  SG  
Sbjct: 358 DGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAF 417

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + +     +      + R    + ++D   R G++D AK +   M  +  +  W T+++
Sbjct: 418 SKKEAIHGFVVKRGLDRDRFVQ-NALMDMYSRLGKIDIAKRIFGKMEDR-DLVTWNTIIT 475

Query: 495 A---CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
                  H D  L     +IL R   +      +  N          C  L  LA+ K +
Sbjct: 476 GYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEI 535

Query: 552 KKVAGRSWVEVD 563
              A ++ +  D
Sbjct: 536 HAYAIKNNLATD 547


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/705 (36%), Positives = 392/705 (55%), Gaps = 53/705 (7%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERNVVSWTALMCGFL 89
           GVQ+HG + K  +  D+++ N LI MY  C    N A +VFD +  RN +SW +++  + 
Sbjct: 221 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 280

Query: 90  QNGNAKACLSLFCQMGSS----SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           + G+A +   LF  M       S KPN+     ++   G       G ++H   +++G  
Sbjct: 281 RRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGR----RKGREVHAHVIRTGLN 336

Query: 146 WNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
            N V +GN +++MY+K G I +A  +F++M  K  ++WN++I+G      S+    +F  
Sbjct: 337 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSL 396

Query: 205 MQEHGEIP--------------------------------DEFTFTSTLKACGSLGSVGG 232
           M E+ ++                                    TF + L A  SL     
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILG 291
             QIH  ++   +  S  T I  +L+  Y KCG + E  ++F  + E +  +SW+S+I G
Sbjct: 457 SHQIHALVLK--YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 514

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           Y   E L +AM+L   + ++  ++D F  ++++   A  A +E+G ++HA   +     D
Sbjct: 515 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD 574

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V +++VDMY KCG ID A+  F  MP++NV +W  +I+GY +HG  ++A+ LF +M+L
Sbjct: 575 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 634

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
           D   PD V ++ VLSACSH G VEE  E+F  +    R+ PR+EH+SC+VD LGRAG+LD
Sbjct: 635 DGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 694

Query: 472 EAKNLIESMPVKPSIAIWQTLLSA-CRVHG-DLELGREVGEILLRLDGDNPVNYVMMSNI 529
           E  + I SMP+KP++ IW+T+L A CR +G + ELGR   E+LL L+  N VNYV+++N+
Sbjct: 695 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 754

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           +A    W +  + R   +   +KK AG SWV +   +H F  GD  HP  + I+  L E+
Sbjct: 755 YASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLREL 814

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFK 649
            ++M++  G++   KYAL D++ E+KEE L  HSEK+A+   L R     Q    IR+ K
Sbjct: 815 NRKMRDA-GYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTR-----QSALPIRIMK 868

Query: 650 NLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           NLRVCGDCH     +SKI+    V+RD+ RFH FE G CSCGDYW
Sbjct: 869 NLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 258/549 (46%), Gaps = 71/549 (12%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CCS+        +LH   +K GF  +L L+N LI++Y + G++  A  +FD+M  RN+V+
Sbjct: 113 CCSEE-----ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVT 167

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHG 137
           W  L+ G+ QNG      + F  M  +   PN +   + ++A   SG  S  + G+QIHG
Sbjct: 168 WACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP-SGCKLGVQIHG 226

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           +  K+ +  + VV N +I MY  C    N+A  +FD +  ++ I+WN++I+ Y   G + 
Sbjct: 227 LISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAV 286

Query: 197 KGLLLFRKMQEHG-----EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
               LF  MQ+ G     +  D F+  S L+          G ++H  +I +G   + K 
Sbjct: 287 SAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE-----GRRKGREVHAHVIRTGLNDN-KV 340

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            I   LV+ Y K G + +A  VF+L+ +K  +SW+SLI G  Q E   +A E+F  + E 
Sbjct: 341 AIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPE- 399

Query: 312 SLQVDGFVLSSMMGVFAD------------------------------------FALVEQ 335
               D    +S++G  +D                                     +L E 
Sbjct: 400 ---YDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYG 394
             QIHA   K     DT++ N+++  Y KCG ++E  ++F  M   ++ V+W  +I+GY 
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCNDKRMK 451
            + L  +A+ L   M+      D   +  +LSAC+    +E   E  +   R C    ++
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC----LE 572

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             +   S +VD   + GR+D A    E MP++ ++  W +++S    HG  E   ++   
Sbjct: 573 SDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTR 631

Query: 512 LLRLDGDNP 520
           ++ LDG  P
Sbjct: 632 MM-LDGQPP 639



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+    L+ G+++H   ++     D+++ + L+DMY+KCG ++ A   F+ M 
Sbjct: 543 FATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 602

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNV SW +++ G+ ++G+ +  L LF +M      P+  T    + A   +  VE G +
Sbjct: 603 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE 662

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
            H   M   +  +P V +   ++D+  + G+++E     + MP K +++ W  ++  
Sbjct: 663 -HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 718


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/709 (34%), Positives = 389/709 (54%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y+K G+M+  C  FD++ +R+ VSWT ++ G+   G     + +   M    ++
Sbjct: 84  NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P +FTL+  + +      +E G ++H   +K G   N  V NS+++MY+KCG        
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  +++ A   F+ M  + ++TWN+MI+G+   GY  + L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS---------- 248
            +F KM     + PD FT  S L AC +L  +  G QIH  ++T+GF  S          
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323

Query: 249 ------VKTV-------------IAG--SLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                 V+T              I G  +L+D Y+K G + +A+ +F  ++ + V++W++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q  +  EA+ LFR +     + + + L++M+ V +  A +  GKQIH  A K  
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLF 406
                SVSN+++ MY K G I  A+  F+ +   ++ V+WT +I    +HG A+EA+ LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             ML++ + PD + Y+ V SAC+H+GLV + ++YF  + +  ++ P + HY+C+VD  GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG L EA+  IE MP++P +  W +LLSACRVH +++LG+   E LL L+ +N   Y  +
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G W E  ++RK  +   +KK  G SW+EV  ++H F   D THP   +I+  +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
            ++   +K ++G+V      LHD++EE KE+ LR HSEKLAI   L+       P K  +
Sbjct: 684 KKIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI-----STPDKTTL 737

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  IK +SK++    +VRD TRFH F+ G CSC DYW
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 239/508 (47%), Gaps = 78/508 (15%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG------------- 61
           L + L   +    ++ G ++H  +VK+G   ++ ++N L++MYAKCG             
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208

Query: 62  ------------------EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                             +M+ A A F++M ER++V+W +++ GF Q G     L +F +
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268

Query: 104 MGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           M   S+  P+ FTL++ + A   L  +  G QIH   + +GF+ + +V N++I MYS+CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328

Query: 163 RI---------------------------------NEAARMFDVMPAKSLITWNAMIAGY 189
            +                                 N+A  +F  +  + ++ W AMI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G   + + LFR M   G+ P+ +T  + L    SL S+  G QIHG  + SG  YSV
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++ +L+  Y K G +  A R FDLI  ++  +SW+S+I+  AQ  +  EA+ELF  +
Sbjct: 449 S--VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT-SVSNSIVDMYLKCGL 367
               L+ D      +        LV QG+Q       V   + T S    +VD++ + GL
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKH---GLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           + EA E   +MP++ +VVTW  +++    H    L K A     ++LL + E  G AY A
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA---ERLLLLEPENSG-AYSA 622

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMK 451
           + +  S  G  EE+ +   +   D R+K
Sbjct: 623 LANLYSACGKWEEAAK-IRKSMKDGRVK 649



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 38/318 (11%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------- 60
           L  +R  LA  L  C+    L  G Q+H  +V  GF    ++ N LI MY++C       
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334

Query: 61  --------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
                                     G+MN A  +F  + +R+VV+WTA++ G+ Q+G+ 
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394

Query: 95  KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSI 154
              ++LF  M     +PN +TL+  +  +  L+S+ +G QIHG  +KSG  ++  V N++
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454

Query: 155 IDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           I MY+K G I  A+R FD++   +  ++W +MI      G++++ L LF  M   G  PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARR 272
             T+     AC   G V  G Q   F +       + T+     +VD + + G L EA+ 
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572

Query: 273 VFDLIE-QKSVISWSSLI 289
             + +  +  V++W SL+
Sbjct: 573 FIEKMPIEPDVVTWGSLL 590



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 93/189 (49%), Gaps = 8/189 (4%)

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS-NSIVDMYLKCGLIDEATELFN 376
           ++++++M V++     + G  +HA        L T+ S N+++  Y K G +D   E F+
Sbjct: 50  YLMNNLMNVYS-----KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFD 104

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           ++P ++ V+WT +I GY   G   +A+ +   M+ + +EP       VL++ + +  +E 
Sbjct: 105 QLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET 164

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++  S +     ++  +   + +++   + G    AK + + M V+  I+ W  +++  
Sbjct: 165 GKKVHSFIVK-LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR-DISSWNAMIALH 222

Query: 497 RVHGDLELG 505
              G ++L 
Sbjct: 223 MQVGQMDLA 231


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/709 (33%), Positives = 392/709 (55%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  +AK G ++ A  VFD++ + + VSWT ++ G+   G  K+ +  F +M SS + 
Sbjct: 83  NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
           P +FT +  + +     +++ G ++H   +K G      V NS+++MY+KCG        
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202

Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                  + + A  +FD M    +++WN++I GY   GY  + L
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLI----------------- 241
             F  M +   + PD+FT  S L AC +  S+  G QIH  ++                 
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISM 322

Query: 242 ---------------TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
                           +G P S+  +   SL+D Y K G +  AR +FD ++ + V++W+
Sbjct: 323 YAKSGAVEVAHRIVEITGTP-SLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWT 381

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I+GYAQ   +++A+ LFR +     + + + L++++ V +  A ++ GKQ+HA A ++
Sbjct: 382 AMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRL 441

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEM-PVKNVVTWTVIITGYGKHGLAKEAVGL 405
                 SV N+++ MY + G I +A ++FN +   ++ +TWT +I    +HGL  EA+ L
Sbjct: 442 EEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIEL 501

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F KML  +++PD + Y+ VLSAC+H GLVE+ + YF+ + N   ++P   HY+C++D LG
Sbjct: 502 FEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLG 561

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L+EA N I +MP++P +  W +LLS+CRVH  ++L +   E LL +D +N   Y+ 
Sbjct: 562 RAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLA 621

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           ++N  +  G W +  ++RK  + K +KK  G SWV++  ++H F   D  HP  + I+ +
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCM 681

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           + ++ K +K ++GF+      LHD+++E KE+ LR HSEKLAI  AL+    N      +
Sbjct: 682 ISKIWKEIK-KMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALI----NTPKHTTV 736

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  I+ +S +++   +VRDATRFH F+ G CSC DYW
Sbjct: 737 RIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 224/496 (45%), Gaps = 74/496 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG-- 61
           VS  +   +    + L  C+    LD G ++H  +VK+G S  + + N L++MYAKCG  
Sbjct: 137 VSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDS 196

Query: 62  -----------------------------EMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
                                        + + A A+FD+M + ++VSW +++ G+   G
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG 256

Query: 93  NAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                L  F  M  SSS+KP++FTL + + A     S++ G QIH   +++  +    VG
Sbjct: 257 YDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVG 316

Query: 152 NSIIDMYSKCGRINEAAR---------------------------------MFDVMPAKS 178
           N++I MY+K G +  A R                                 +FD +  + 
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++ W AMI GY   G     L+LFR M   G  P+ +T  + L    SL S+  G Q+H 
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHA 436

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEEN 297
             I      SV   +  +L+  Y + G + +AR++F+ I   +  ++W+S+IL  AQ   
Sbjct: 437 VAIRLEEVSSVS--VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGL 494

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             EA+ELF ++   +L+ D      ++       LVEQGK        V +   TS   +
Sbjct: 495 GNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYA 554

Query: 358 -IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
            ++D+  + GL++EA      MP++ +VV W  +++    H     A     K+LL D  
Sbjct: 555 CMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPN 614

Query: 416 PDGVAYLAV---LSAC 428
             G AYLA+   LSAC
Sbjct: 615 NSG-AYLALANTLSAC 629



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 7/217 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L   S    LD+G QLH   +++     + + N LI MY++ G +  A  +F+ + 
Sbjct: 415 LAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHIC 474

Query: 75  E-RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+ ++WT+++    Q+G     + LF +M   ++KP+  T    + A   +  VE G 
Sbjct: 475 SYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK 534

Query: 134 QIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYV 190
               + MK+     P   +   +ID+  + G + EA      MP +  ++ W ++++   
Sbjct: 535 SYFNL-MKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCR 593

Query: 191 LAGYSDKGLLLFRKMQ--EHGEIPDEFTFTSTLKACG 225
           +  Y D   +   K+   +           +TL ACG
Sbjct: 594 VHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACG 630


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/575 (38%), Positives = 349/575 (60%), Gaps = 8/575 (1%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           ++A      V  G  +HG  +K+   W     N+++DMY+KCG ++ A  +FD+M  +++
Sbjct: 5   LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           +TW ++IA Y   G SD+ + LF +M   G  PD FT T+ L AC   GS+  G  +H +
Sbjct: 65  VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +  +    ++   +  +L+D Y KCG + +A  VF  +  K +ISW+++I GY++     
Sbjct: 125 IRENDMQSNI--FVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+ LF  +    ++ DG  L+ ++   A  A +++GK++H +  +     D  V+N++V
Sbjct: 183 EALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY+KCG+   A  LF+ +P K+++TWTV+I GYG HG    A+  F +M    +EPD V
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           +++++L ACSHSGL++E   +F+ + ++  +KP++EHY+CIVD L R+G+L  A   I+S
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP++P   IW  LLS CR+H D++L  +V E +  L+ +N   YV+++N +A+A  W E 
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEV 421

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
           ++LR+    +GLKK  G SW+EV  ++H F  G+ +HP  +KI  +L  +  +MKEE G+
Sbjct: 422 KKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEE-GY 480

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
               +YAL +     KE +L  HSEKLA+      G LN  P + IRV KNLRVCGDCHE
Sbjct: 481 FPKTRYALINADSLQKETALCGHSEKLAMAF----GILNLPPARTIRVSKNLRVCGDCHE 536

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SK L    V+RD+ RFH F+ GVC C  +W
Sbjct: 537 MAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 215/412 (52%), Gaps = 11/412 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    +  G  +HG+ VK    +     N L+DMYAKCG ++GA  VFD M  R V
Sbjct: 5   LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT+L+  + + G +   + LF +M    V P+ FT++T + A     S+ENG  +H  
Sbjct: 65  VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             ++  + N  V N+++DMY+KCG + +A  +F  MP K +I+WN MI GY      ++ 
Sbjct: 125 IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEA 184

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M    + PD  T    L AC SL S+  G ++HG ++ +GF +S + V A +LV
Sbjct: 185 LSLFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGF-FSDQQV-ANALV 241

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D YVKCG  V AR +FD+I  K +I+W+ +I GY        A+  F ++R+  ++ D  
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301

Query: 319 VLSSMMGVFADFALVEQGKQ---IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
              S++   +   L+++G +   +      V   L+      IVD+  + G +  A +  
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYA--CIVDLLARSGKLAMAYKFI 359

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             MP++ +   W  +++G   H   K A  +   +   ++EP+   Y  +L+
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVF--ELEPENTGYYVLLA 409



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 153/284 (53%), Gaps = 9/284 (3%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSV--KTVIAGSLVDFYVKCGCLVEARRVFDL 276
           S L+AC + G V  G  +HG    SG    V  KT    +L+D Y KCG L  A  VFDL
Sbjct: 3   SILQACANCGDVSLGRAVHG----SGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDL 58

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  ++V++W+SLI  YA+E    EA+ LF ++    +  D F +++++   A    +E G
Sbjct: 59  MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           K +H Y  +     +  V N+++DMY KCG +++A  +F EMPVK++++W  +I GY K+
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
            L  EA+ LF  M+L +++PDG     +L AC+    ++  +E    +  +     + + 
Sbjct: 179 SLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ-QV 236

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            + +VD   + G    A+ L + +P K  I  W  +++   +HG
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLIT-WTVMIAGYGMHG 279



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+    LD G ++HG +++ GF  D  + N L+DMY KCG    A  +FD + 
Sbjct: 202 LACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 261

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++++WT ++ G+  +G     ++ F +M  + ++P+E +  + + A      ++ G +
Sbjct: 262 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWR 321

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
              + M+      P + +   I+D+ ++ G++  A +    MP +   T W A+++G
Sbjct: 322 FFNV-MQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/680 (36%), Positives = 388/680 (57%), Gaps = 19/680 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   + LL  G ++HG +VK GF  D+ + N LI MY++ G +  A  +FDK+  ++VVS
Sbjct: 135 CLIPSFLL--GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVS 192

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH---- 136
           W+ ++  + ++G     L L   M    VKP+E  + +       L+ ++ G  +H    
Sbjct: 193 WSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVM 252

Query: 137 --GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
             G C KSG      +  ++IDMY KC  +  A R+FD +   S+I+W AMIA Y+    
Sbjct: 253 RNGKCGKSGVP----LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNN 308

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++G+ LF KM   G  P+E T  S +K CG+ G++  G  +H F + +GF  S+  V+A
Sbjct: 309 LNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL--VLA 366

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            + +D Y KCG +  AR VFD  + K ++ WS++I  YAQ   + EA ++F  +    ++
Sbjct: 367 TAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   + S++ + A    +E GK IH+Y  K     D  +  S VDMY  CG ID A  L
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRL 486

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E   +++  W  +I+G+  HG  + A+ LF +M    V P+ + ++  L ACSHSGL+
Sbjct: 487 FAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLL 546

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E +  F ++ ++    P++EHY C+VD LGRAG LDEA  LI+SMP++P+IA++ + L+
Sbjct: 547 QEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLA 606

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC++H +++LG    +  L L+       V+MSNI+A A  W +   +R+  + +G+ K 
Sbjct: 607 ACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKE 666

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G S +EV+  +H F  GD  HP  +K+++++ EM +++ E+ G+   V   LH+I +E 
Sbjct: 667 PGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKL-EDAGYTPDVSCVLHNIDKEK 725

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K  +L  HSEKLA+   L+    +  PG  IR+ KNLRVC DCH   K LSKI     +V
Sbjct: 726 KVSALNYHSEKLAMAYGLI----STAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIV 781

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F+ G CSC DYW
Sbjct: 782 RDRNRFHHFKEGSCSCCDYW 801



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 223/468 (47%), Gaps = 5/468 (1%)

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N    + L+  +++N        ++  M  +  + + F + + +KA  ++ S   G ++H
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G  +K+GF  +  V N++I MYS+ G +  A  +FD +  K +++W+ MI  Y  +G  D
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L L R M      P E    S       L  +  G  +H +++ +G        +  +
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D YVKC  L  ARRVFD + + S+ISW+++I  Y    NL E + LF ++    +  +
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++        +E GK +HA+  +    L   ++ + +DMY KCG +  A  +F+
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD 387

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
               K+++ W+ +I+ Y ++    EA  +F  M    + P+    +++L  C+ +G +E 
Sbjct: 388 SFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +   S + + + +K  +   +  VD     G +D A  L      +  I++W  ++S  
Sbjct: 448 GKWIHSYI-DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR-DISMWNAMISGF 505

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA--DAGSWNECERL 542
            +HG  E   E+ E +  L G  P +   +  +HA   +G   E +RL
Sbjct: 506 AMHGHGEAALELFEEMEAL-GVTPNDITFIGALHACSHSGLLQEGKRL 552



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 66/407 (16%)

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS------------------GFPY 247
           Q HG      +  S      +L S      IH FLITS                  G   
Sbjct: 61  QLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDT 120

Query: 248 SVKTVIAGSLVD----------------FYVK-------------------CGCLVEARR 272
            V   +  S++                 F VK                    G L  AR 
Sbjct: 121 EVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARL 180

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD IE K V+SWS++I  Y +   L EA++L R +    ++     + S+  V A+ A 
Sbjct: 181 LFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELAD 240

Query: 333 VEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           ++ GK +HAY  +      + V    +++DMY+KC  +  A  +F+ +   ++++WT +I
Sbjct: 241 LKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMI 300

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS-RLCNDKR 449
             Y       E V LF KML + + P+ +  L+++  C  +G +E  +   +  L N   
Sbjct: 301 AAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFT 360

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +   +   +  +D  G+ G +  A+++ +S   K  + +W  ++S+   +  ++   E  
Sbjct: 361 LSLVLA--TAFIDMYGKCGDVRSARSVFDSFKSK-DLMMWSAMISSYAQNNCID---EAF 414

Query: 510 EILLRLDG----DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           +I + + G     N    V +  I A AGS    + +      +G+K
Sbjct: 415 DIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIK 461



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 1/164 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K   L+ G  +H  + K G   D++L    +DMYA CG+++ A  +F +  +R++
Sbjct: 436 LMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDI 495

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
             W A++ GF  +G+ +A L LF +M +  V PN+ T    + A      ++ G ++ H 
Sbjct: 496 SMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHK 555

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           M  + GF         ++D+  + G ++EA  +   MP +  I 
Sbjct: 556 MVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/700 (34%), Positives = 396/700 (56%), Gaps = 45/700 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD-KMLERNVVSWTALMCGFLQN 91
           +LH  ++ +G    ++ +  LI  YA   +   + +VF       NV  W +++     N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     LSL+ +     ++P+ +T  + I A   L   E    IH   +  GF  +  +G
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL-LLFRKMQEHGE 210
           N++IDMY +   +++A ++F+ MP + +++WN++I+GY   GY ++ L + ++ ++   E
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 211 I-----PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +     PD  T TS L+ACG LG +  G  +H ++ITSG  Y   T  +  L++ Y KCG
Sbjct: 214 MVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG--YECDTTASNILINMYAKCG 271

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM- 324
            L+ ++ VF  ++ K  +SW+S+I  Y Q   + +++++F  ++ R +     +++S + 
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 325 -----------------GVFADFALV-------------EQGKQIHAYAAKVPSGLDTSV 354
                            GV  D A +              QGK+IH    K+    D  V
Sbjct: 332 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N +++MY KCG +  + ++F  M  K+VVTWT +I+  G +G  K+AV  F +M    +
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            PD VA++A++ ACSHSGLVEE   YF R+  D +++PRIEHY+C+VD L R+  LD+A+
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           + I SMP+KP  +IW  LLSACR+ GD E+   V E ++ L+ D+   YV++SNI+A  G
Sbjct: 512 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALG 571

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W++   +RK  +++GLKK  G SW+E+  +++ F  G       E+++++L  +   M 
Sbjct: 572 KWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMA 631

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           +E G++  +++ LHDI E+ K + L  HSE+LAI   L    LN +PG  ++V KNLRVC
Sbjct: 632 KE-GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGL----LNTKPGTPLQVMKNLRVC 686

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +SKI++   +VRDA RFH F+ G CSCGDYW
Sbjct: 687 EDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 234/528 (44%), Gaps = 89/528 (16%)

Query: 5   SFSLVSERQRL---------ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           + SL SE QR+            +  C+  L  +    +H  ++ MGF  DL + N LID
Sbjct: 99  ALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALID 158

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS------SSV 109
           MY +  +++ A  VF++M  R+VVSW +L+ G+  NG     L ++ Q         +  
Sbjct: 159 MYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQF 218

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC-------- 161
           KP+  T+++ ++A G L  +E G  +H   + SG+E +    N +I+MY+KC        
Sbjct: 219 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 278

Query: 162 -----------------------GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                  G++ ++ ++F+ M A+ +ITWN +IA  V +   + G
Sbjct: 279 VFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 338

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +  +M+  G  PD  T  S L  C  L +   G +IHG +   G    V   +   L+
Sbjct: 339 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP--VGNVLI 396

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KCG L  + +VF L++ K V++W++LI          +A+  F ++    +  D  
Sbjct: 397 EMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHV 456

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
              +++   +   LVE+G   + +  K    ++  + +   +VD+  +  L+D+A +   
Sbjct: 457 AFVAIIFACSHSGLVEEGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFIL 515

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            MP+K                                  PD   + A+LSAC  SG  E 
Sbjct: 516 SMPLK----------------------------------PDSSIWGALLSACRMSGDTEI 541

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA-GRLDEAKNLIESMPVK 483
           ++    R+     + P    Y  +V ++  A G+ D+ +++ +S+  +
Sbjct: 542 AERVSERII---ELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 586



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 158/362 (43%), Gaps = 55/362 (15%)

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E   +  F+S  +A  S  +     ++H  +IT G  +SV  + +  L+  Y        
Sbjct: 9   ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSV--IFSAKLIAKYAHFRDPTS 66

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +  VF L     +V  W+S+I         +EA+ L+ + +   LQ D +   S++   A
Sbjct: 67  SFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA 126

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                E  K IH     +  G D  + N+++DMY +   +D+A ++F EMP+++VV+W  
Sbjct: 127 GLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 186

Query: 389 IITGYGKHGLAKEAVGLFRKM------LLDDVEPDGVAYLAVLSACSHSGLVE------- 435
           +I+GY  +G   EA+ ++ +       +++  +PD +   ++L AC H G +E       
Sbjct: 187 LISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHD 246

Query: 436 ----------------------------ESQEYFSRL-CNDKRMKPRIEHYSCIVDSLGR 466
                                        SQE FS + C D         ++ +++   +
Sbjct: 247 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDS------VSWNSMINVYIQ 300

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG-REVGEILLRLDGDNPVNYVM 525
            G++ ++  + E+M  +  I  W T++++C    D  LG R +    +R +G  P    M
Sbjct: 301 NGKMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISR--MRTEGVTPDMATM 357

Query: 526 MS 527
           +S
Sbjct: 358 LS 359


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/676 (35%), Positives = 381/676 (56%), Gaps = 8/676 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+C +    ++ G  +HG L K+GF     + N L+  YAK      A  VFD M  R+V
Sbjct: 203 LKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDV 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++ G   NG     + LF +M     + +  TL + + A   L  +  G  +HG 
Sbjct: 263 ISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGY 322

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GF     + N ++DMYS C       ++F  M  K++++W AMI  Y  AG  DK 
Sbjct: 323 SVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKV 382

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF++M   G  PD F  TS L A      +  G  +HG+ I +G    +   +  +L+
Sbjct: 383 AGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVL--AVTNALM 440

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + YVKCG + EA+ +FD +  K +ISW++LI GY++     EA  LF ++  + L+ +  
Sbjct: 441 EMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAV 499

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++ ++   A  + +E+G+++HAYA +     D  V+N+++DMY+KCG +  A  LF+ +
Sbjct: 500 TMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRL 559

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             KN+++WT+++ GYG HG  ++A+ LF +M +  + PD  ++ A+L ACSHSGL +E  
Sbjct: 560 SNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGW 619

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +F  +  + +++PR++HY+C+VD L   G L EA   I+SMP++P  +IW +LL  CR+
Sbjct: 620 RFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRI 679

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H +++L  EV E +  L+ +N   YV+++NI+A+A  W    +L+     +GL++  G S
Sbjct: 680 HRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCS 739

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+E   ++H F   +  HP   +I + L E+ KRM+EE G     KYAL         E+
Sbjct: 740 WIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEE-GHDPKKKYALMGADNAVHGEA 798

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HS KLA+      G LN   G++IRV KN RVC  CHE  K +SK+     ++RD+ 
Sbjct: 799 LCGHSSKLAVAF----GVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSN 854

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH FE G CSC  YW
Sbjct: 855 RFHHFEQGRCSCRGYW 870



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 258/486 (53%), Gaps = 9/486 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLM---LNNDLIDMYAKCGEMNGACAVFDKMLE 75
           L+ CS+   L+ G + H  +       D M   L   L+ MY KCG++  A  VFD+M +
Sbjct: 98  LQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQ 157

Query: 76  -RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             +V  WTALM G+ + G+ +  + LF +M    V+P+ +T+S  +K    L S+E+G  
Sbjct: 158 VSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEV 217

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG+  K GF     VGN+++  Y+K  R  +A  +FD MP + +I+WN+MI+G    G 
Sbjct: 218 VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGL 277

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            DK + LF +M   GE  D  T  S L AC  L  +  G  +HG+ + +GF    +T +A
Sbjct: 278 YDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI--SQTSLA 335

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y  C       ++F  + QK+V+SW+++I  Y +     +   LF+++     +
Sbjct: 336 NVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTR 395

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D F ++S +  FA   L++ GK +H YA +       +V+N++++MY+KCG ++EA  +
Sbjct: 396 PDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLI 455

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+ +  K++++W  +I GY ++ LA EA  LF +MLL  + P+ V    +L A +    +
Sbjct: 456 FDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSL 514

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           E  +E  +       ++      + ++D   + G L  A+ L + +  K  I+ W  +++
Sbjct: 515 ERGREMHAYALRRGYLEDDFV-ANALIDMYVKCGALLLARRLFDRLSNKNLIS-WTIMVA 572

Query: 495 ACRVHG 500
              +HG
Sbjct: 573 GYGMHG 578


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/602 (37%), Positives = 360/602 (59%), Gaps = 8/602 (1%)

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N+K  L +   +   S++P+    +T +K    L  ++ G  +H   + S F+ + V+ N
Sbjct: 54  NSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQN 113

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++ MY++CG +  A R+FD MP + +++W +MI GY     +   LLLF +M   G  P
Sbjct: 114 SLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEP 173

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +EFT +S +K CG + S   G QIH      G   +V   +  SLVD Y +CG L EA  
Sbjct: 174 NEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNV--FVGSSLVDMYARCGYLGEAML 231

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +  K+ +SW++LI GYA++    EA+ LF +++    +   F  S+++   +    
Sbjct: 232 VFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGC 291

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +EQGK +HA+  K    L   V N+++ MY K G I +A ++F+++   +VV+   ++ G
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y +HGL KEA   F +M+   +EP+ + +L+VL+ACSH+ L++E + YF  L     ++P
Sbjct: 352 YAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFG-LMRKYNIEP 410

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++ HY+ IVD LGRAG LD+AK+ IE MP++P++AIW  LL A ++H + E+G    + +
Sbjct: 411 KVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRV 470

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             LD   P  + +++NI+A AG W +  ++RK+ +  G+KK    SWVEV+  +H F   
Sbjct: 471 FELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVAN 530

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP  EKIH++  ++ +++K E+G+V    + L  + ++ KE +L+ HSEKLA+  AL
Sbjct: 531 DVAHPQKEKIHKMWEKLNQKIK-EIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFAL 589

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
               LN  PG  IR+ KN+RVCGDCH  IK +S ++K   +VRD  RFH F  G CSCGD
Sbjct: 590 ----LNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGD 645

Query: 693 YW 694
           YW
Sbjct: 646 YW 647



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 217/393 (55%), Gaps = 7/393 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  +R      L+ C++   L  G  +H  ++   F  DL++ N L+ MYA+CG + GA
Sbjct: 69  SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD+M  R++VSWT+++ G+ QN  A   L LF +M S   +PNEFTLS+ +K  G +
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S   G QIH  C K G   N  VG+S++DMY++CG + EA  +FD +  K+ ++WNA+I
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AGY   G  ++ L LF +MQ  G  P EFT+++ L +C S+G +  G  +H  L+ S   
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS--- 305

Query: 247 YSVKTV--IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
            S K V  +  +L+  Y K G + +A +VFD + +  V+S +S+++GYAQ     EA + 
Sbjct: 306 -SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQ 364

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++    ++ +     S++   +   L+++GK       K       S   +IVD+  +
Sbjct: 365 FDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGR 424

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            GL+D+A     EMP++  V  W  ++     H
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/678 (36%), Positives = 378/678 (55%), Gaps = 44/678 (6%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSSSV 109
           N+L+  Y+K G ++   + F+K+ +R+ V+W  L+ G+  +G   A +  +   M   S 
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--------- 160
                TL T +K S     V  G QIHG  +K GFE   +VG+ ++ MY+          
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195

Query: 161 ----------------------CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                 CG I +A ++F  M   S ++W AMI G    G + + 
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQNGLAKEA 254

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  FR+M+  G   D++ F S L ACG LG++  G QIH  +I + F   +   +  +L+
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI--YVGSALI 312

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL  A+ VFD ++QK+V+SW+++++GY Q     EA+++F  ++   +  D +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFN 376
            L   +   A+ + +E+G Q H  A  + SGL    +VSNS+V +Y KCG ID++T LFN
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKA--ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM V++ V+WT +++ Y + G A E + LF KM+   ++PDGV    V+SACS +GLVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            Q YF  + ++  + P I HYSC++D   R+GRL+EA   I  MP  P    W TLLSAC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R  G+LE+G+   E L+ LD  +P  Y ++S+I+A  G W+   +LR+  R K +KK  G
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
           +SW++   ++H F   D++ P  ++I+  L E+  ++ +  G+     +  HD++E  K 
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDN-GYKPDTSFVHHDVEEAVKV 669

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + L  HSE+LAI   L+        G+ IRV KNLRVC DCH   K +S +     +VRD
Sbjct: 670 KMLNYHSERLAIAFGLIF----VPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRD 725

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFHRF+ G CSCGD+W
Sbjct: 726 AVRFHRFKDGTCSCGDFW 743



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 238/479 (49%), Gaps = 38/479 (7%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           FS    R  L   L+  S N  +  G Q+HG ++K+GF   L++ + L+ MYA  G ++ 
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192

Query: 66  ACAVFDKMLERNVV------------------------------SWTALMCGFLQNGNAK 95
           A  VF  + +RN V                              SW A++ G  QNG AK
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             +  F +M    +K +++   + + A G L ++  G QIH   +++ F+ +  VG+++I
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           DMY KC  ++ A  +FD M  K++++W AM+ GY   G +++ + +F  MQ  G  PD +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T    + AC ++ S+  G+Q HG  ITSG  + V   ++ SLV  Y KCG + ++ R+F+
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYV--TVSNSLVTLYGKCGDIDDSTRLFN 430

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  +  +SW++++  YAQ     E ++LF ++ +  L+ DG  L+ ++   +   LVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490

Query: 336 GKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
           G++          G+  S+ +   ++D++ + G ++EA    N MP   + + WT +++ 
Sbjct: 491 GQRYFKLMTS-EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
               G     +G +    L +++P   A   +LS+   S    +S     R   +K +K
Sbjct: 550 CRNKG--NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 200/445 (44%), Gaps = 79/445 (17%)

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
           IHG  +++       + N+I+  Y+       A R+FD +P  +L +WN ++  Y     
Sbjct: 28  IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87

Query: 190 ---------------------VLAGYSDKGLL------LFRKMQEHGEIPDEFTFTSTLK 222
                                ++ GYS  GL+          M++        T  + LK
Sbjct: 88  ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-------- 274
              S G V  G QIHG +I  GF   +  ++   L+  Y   GC+ +A++VF        
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYL--LVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205

Query: 275 -------------DLIE---------QKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
                         +IE         +K  +SW+++I G AQ     EA+E FR+++ + 
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           L++D +   S++        + +GKQIHA   +        V ++++DMY KC  +  A 
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F+ M  KNVV+WT ++ GYG+ G A+EAV +F  M    ++PD       +SAC++  
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAI 488
            +EE  ++     + K +   + HY  + +SL    G+ G +D++  L   M V+ +++ 
Sbjct: 386 SLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS- 439

Query: 489 WQTLLSACRVHGDLELGREVGEILL 513
           W  ++SA       + GR V  I L
Sbjct: 440 WTAMVSAY-----AQFGRAVETIQL 459



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 78/405 (19%)

Query: 217 FTSTLKACGSLGSVGGG---TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           ++  +K C  LG+         IHG +I +  PY  +T +  ++V  Y        ARRV
Sbjct: 6   YSVQIKQCIGLGARNQSRYVKMIHGNIIRA-LPYP-ETFLYNNIVHAYALMKSSTYARRV 63

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQVDGFVLSSMMG--- 325
           FD I Q ++ SW++L+L Y++   ++E    F +L +R     ++ ++G+ LS ++G   
Sbjct: 64  FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123

Query: 326 -----VFADFAL-------------------VEQGKQIHAY------------------- 342
                +  DF+                    V  GKQIH                     
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183

Query: 343 ---------AAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
                    A KV  GLD   T + NS++   L CG+I++A +LF  M  K+ V+W  +I
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMI 242

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G  ++GLAKEA+  FR+M +  ++ D   + +VL AC   G + E ++  + +      
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-TNF 301

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  I   S ++D   +   L  AK + + M  K ++  W  ++     +G      E  +
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAEEAVK 357

Query: 511 ILLRLD--GDNPVNYVMMSNIH--ADAGSWNECERLRKLARSKGL 551
           I L +   G +P +Y +   I   A+  S  E  +    A + GL
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/674 (36%), Positives = 386/674 (57%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C+  + L  G ++H  +V+  F  D+ + N LI MY KCG++  A  +FDKM  R+ 
Sbjct: 142 LRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDR 201

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +N      L LF +M   S+ P+  T+++ I A  +L     G Q+H  
Sbjct: 202 ISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSY 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++ ++ N  V NS+I MY   G   EA  +F  M  + +++W  +I+G V     DK 
Sbjct: 262 VVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKA 321

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  ++ M+  G +PDE T  S L AC SLG +  G ++H     +G  + +  V+A SL+
Sbjct: 322 LETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG--HILYVVVANSLI 379

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  + +A  +F  I  K VISW+S+I G        EA+  FR++  +S + +  
Sbjct: 380 DMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSV 438

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S +   A    +  GK+IHA+A K   G D  + N+I+D+Y++CG +  A   FN +
Sbjct: 439 TLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-L 497

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V  W +++TGY + G     + LF++M+  ++ PD V ++++L ACS SG+V E  
Sbjct: 498 NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGL 557

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           EYF R+  +  + P ++HY+C+VD LGRAG+L+EA   IE MP+KP  AIW  LL+ACR+
Sbjct: 558 EYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRI 617

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H  + LG    + + + D ++   Y+++ N++AD+G W+E  ++R+  + +GL    G S
Sbjct: 618 HRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCS 677

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F  GD+ HP  ++I+ VL    ++MK   GF  G + +  D  + SK + 
Sbjct: 678 WVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTS-GF-NGQECSSMDGIQTSKADI 735

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+ AI  +L+    N  PG  I V KNL +C  CH  +K +SKI++    VRD  
Sbjct: 736 FCGHSERQAIAYSLI----NSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTE 791

Query: 679 RFHRFEGGVCSCGD 692
           +FH F+ G+CSCGD
Sbjct: 792 QFHHFKDGLCSCGD 805



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 212/384 (55%), Gaps = 3/384 (0%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L N L+ M+ + G++  A  VF +M ER++ SW  L+ G+ + G     L L+ ++  + 
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           ++P+ +T  + +++      +  G ++H   ++  F+ +  V N++I MY KCG +  A 
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD MP +  I+WNAMI+GY       +GL LF +M+E    PD  T TS + AC  LG
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
               GTQ+H +++ + +  ++   +  SL+  Y+  G   EA  VF  +E + V+SW+++
Sbjct: 251 DERLGTQLHSYVVRTAYDGNIS--VYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I G        +A+E ++ +       D   ++S++   A    ++ G ++H  A +   
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
            L   V+NS++DMY KC  I++A E+F+++P K+V++WT +I G   +    EA+  FRK
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428

Query: 409 MLLDDVEPDGVAYLAVLSACSHSG 432
           M+L   +P+ V  ++ LSAC+  G
Sbjct: 429 MILKS-KPNSVTLISALSACARVG 451



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 2/221 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    LD G++LH    + G    +++ N LIDMY+KC  +  A  +F ++ 
Sbjct: 340 IASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIP 399

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +++V+SWT+++ G   N      L  F +M   S KPN  TL + + A   + ++  G +
Sbjct: 400 DKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKE 458

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+G  ++  + N+I+D+Y +CGR+  A   F+ +  K +  WN ++ GY   G 
Sbjct: 459 IHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGK 517

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
               + LF++M E    PD+ TF S L AC   G V  G +
Sbjct: 518 GAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE 558



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/281 (18%), Positives = 123/281 (43%), Gaps = 39/281 (13%)

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVS 355
           NL +A++    ++E  + V+     +++ +  +     +G+ +  A  + + + L   + 
Sbjct: 13  NLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLG 72

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+++ M+++ G +  A  +F  M  +++ +W V++ GY K G   EA+ L+ ++L   + 
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           PD   + +VL +C+ +  +   +E  + +   D  M   ++  + ++    + G +  A+
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMD--VDVVNALITMYVKCGDVVSAR 190

Query: 475 NLIESMPVK----------------------------------PSIAIWQTLLSACRVHG 500
            L + MP +                                  P +    +++SAC + G
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 501 DLELGREVGEILLRLDGDNPVN-YVMMSNIHADAGSWNECE 540
           D  LG ++   ++R   D  ++ Y  +  ++   G W E E
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAE 291


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/674 (34%), Positives = 390/674 (57%), Gaps = 21/674 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LHG +VK G   D+ +   L+++Y +CG    A  +FD+M E+NVV+WTAL+ G+  N  
Sbjct: 100 LHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQ 159

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L +F +M      P+++TL   + A     +++ G Q+HG  +K G      +GNS
Sbjct: 160 PVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNS 219

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYSDKGLLLFRKMQEHGEIP 212
           +  +Y+K G +    R F  +P K++ITW  MI+       Y++ GL LF  M +   +P
Sbjct: 220 LCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMP 279

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +EFT TS +  CG+   +  G Q+ GF    G   ++   +  S +  Y++ G   EA R
Sbjct: 280 NEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLP--VKNSTMYLYLRKGETEEAMR 337

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLRERSLQVDGFVLS 321
           +F+ +E  SVI+W+++I G+AQ  + A           +A+++FR L   +++ D F  S
Sbjct: 338 LFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFS 397

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           S++ V +    +EQG+QIHA   K     D  V++++V+MY KCG I+ AT+ F EMP +
Sbjct: 398 SILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTR 457

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
            +VTWT +I+GY +HG   +A+ LF  M+L   +P+ + ++++LSACS++GLVEE+  YF
Sbjct: 458 TLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYF 517

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             + N+  ++P ++HY C++D   R GRLD+A   I+    +P+ AIW +L++ CR HG+
Sbjct: 518 DMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGN 577

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           +EL     + LL L       YV++ N++   G W +  R+RKL++ + L  +  RSW+ 
Sbjct: 578 MELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWIT 637

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE--SL 619
           +  +++FF   D +HP + +++Q+L  + ++ K  +G+       L+D +E+ K    SL
Sbjct: 638 IRDKVYFFKADDRSHPQSTELYQLLETLLEKAK-AIGYEPYQNTELYDSEEDGKPAAGSL 696

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
           + HSE+LA+ L L++      PG  +R+ KN+ +C DCH  IK  S +     VVRD+ R
Sbjct: 697 KHHSERLAVALGLLKA----PPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKR 752

Query: 680 FHRFEGGVCSCGDY 693
            H+F+ G CSCGD+
Sbjct: 753 LHKFKDGRCSCGDF 766



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 196/399 (49%), Gaps = 20/399 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C  +  +D G Q+HG  +K G +    + N L  +Y K G +      F ++ 
Sbjct: 182 LGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIP 241

Query: 75  ERNVVSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           ++NV++WT ++    ++ N  +  L+LF  M    V PNEFTL++ +   G    +  G 
Sbjct: 242 DKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGK 301

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--VL 191
           Q+ G C K G   N  V NS + +Y + G   EA R+F+ M   S+ITWNAMI+G+  ++
Sbjct: 302 QVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIM 361

Query: 192 AGYSD---------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
               D         + L +FR +      PD FTF+S L  C ++ ++  G QIH   I 
Sbjct: 362 DSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIK 421

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +GF   V  V+  +LV+ Y KCGC+  A + F  +  +++++W+S+I GY+Q     +A+
Sbjct: 422 TGFLSDV--VVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAI 479

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ---IHAYAAKVPSGLDTSVSNSIV 359
           +LF  +     + +     S++   +   LVE+  +   +      +   +D      ++
Sbjct: 480 QLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDH--YGCMI 537

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           DM+++ G +D+A         + N   W+ ++ G   HG
Sbjct: 538 DMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 24/324 (7%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C  +L ++ G Q+ G   K+G + +L + N  + +Y + GE   A  +F++M 
Sbjct: 284 LTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME 343

Query: 75  ERNVVSWTALMCGFLQ-------NGNAKA----CLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           + +V++W A++ GF Q       + +A++     L +F  +  S++KP+ FT S+ +   
Sbjct: 344 DNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVC 403

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             + ++E G QIH   +K+GF  + VV +++++MY+KCG I  A + F  MP ++L+TW 
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWT 463

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +MI+GY   G     + LF  M   G  P+E TF S L AC   G V    +    +   
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNE 523

Query: 244 GFPYSVKTVI--AGSLVDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLILGYAQEEN 297
              Y ++ ++   G ++D +V+ G L +A   +  I++K        WSSL+ G     N
Sbjct: 524 ---YHIEPLMDHYGCMIDMFVRLGRLDDA---YAFIKRKGFEPNEAIWSSLVAGCRSHGN 577

Query: 298 LAEAMELFRQLRE-RSLQVDGFVL 320
           +  A     +L E +   V+ +VL
Sbjct: 578 MELAFYAADRLLELKPKVVETYVL 601



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 13/295 (4%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M + G+      +   L  C   GS+GG   +HG ++ +G    V   +A SLV+ Y++C
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTG--TIVDIFVATSLVNVYMRC 126

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G   +AR +FD + +K+V++W++LI GY        A+E+F ++ +       + L  M+
Sbjct: 127 GNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGML 186

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
                   ++ GKQ+H Y  K  +   TS+ NS+  +Y K G ++     F  +P KNV+
Sbjct: 187 SACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVI 246

Query: 385 TWTVIITGYGK-HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS---GLVEESQEY 440
           TWT +I+   +     +  + LF  ML  +V P+     +V+S C  S    L ++ Q +
Sbjct: 247 TWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGF 306

Query: 441 -FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            F   C           Y  +     R G  +EA  L E M    S+  W  ++S
Sbjct: 307 CFKIGCATNLPVKNSTMYLYL-----RKGETEEAMRLFEEME-DNSVITWNAMIS 355


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 372/630 (59%), Gaps = 29/630 (4%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FDK+ +R+V+SW +++ G++ NG  +  L ++ QM    +  +  T+ + +     
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++  G  +H + +KS FE      N+++DMYSKCG ++ A R+F+ M  +++++W +M
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAGY   G SD  + L ++M++ G   D    TS L AC   GS+  G  +H ++  +  
Sbjct: 324 IAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +L+D Y KCG +  A  VF  +  K +ISW+++I                
Sbjct: 384 ESNL--FVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI---------------- 425

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  L+ D   ++ ++   A  + +E+GK+IH Y  +     D  V+N++VD+Y+KC
Sbjct: 426 -----GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G++  A  LF+ +P K++V+WTV+I+GYG HG   EA+  F +M    +EPD V+++++L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSHSGL+E+   +F  + ND  ++P++EHY+C+VD L R G L +A   IE++P+ P 
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW  LL  CR++ D+EL  +V E +  L+ +N   YV+++NI+A+A  W E +R+R+ 
Sbjct: 601 ATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREK 660

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
              KGL+K  G SW+E+  +++ F  G++ +HP ++KI  +L +M ++MKEE G+    K
Sbjct: 661 IGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEE-GYFPKTK 719

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           YAL +  E  KE +L  HSEKLA+   L    L   P K +RV KNLRVCGDCHE  K +
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGL----LALPPRKTVRVTKNLRVCGDCHEMAKFM 775

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK  +   V+RD+ RFH F+ G CSC  +W
Sbjct: 776 SKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 210/409 (51%), Gaps = 31/409 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ +  L  G  +H   +K  F   +  +N L+DMY+KCG+++GA  VF+KM ERNVVSW
Sbjct: 261 CANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ ++G +   + L  QM    VK +    ++ + A     S++NG  +H     
Sbjct: 321 TSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKA 380

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +  E N  V N+++DMY+KCG ++ A  +F  M  K +I+WN MI               
Sbjct: 381 NNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI--------------- 425

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
                  GE+ PD  T    L AC SL ++  G +IHG+++ +G  YS    +A +LVD 
Sbjct: 426 -------GELKPDSRTMACILPACASLSALERGKEIHGYILRNG--YSSDRHVANALVDL 476

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           YVKCG L  AR +FD+I  K ++SW+ +I GY       EA+  F ++R+  ++ D    
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++   +   L+EQG +   Y  K    ++  + +   +VD+  + G + +A E    +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P+  +   W  ++ G   +   + A  +  ++   ++EP+   Y  +L+
Sbjct: 596 PIAPDATIWGALLCGCRIYHDIELAEKVAERVF--ELEPENTGYYVLLA 642



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 216/484 (44%), Gaps = 78/484 (16%)

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           A   + ++R V  + A +  F Q GN +  + L C    S ++    T S+ ++      
Sbjct: 56  ATPTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSK 113

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS--------- 178
           S+ +G ++H +   +    + V+G  ++ +Y+ CG + E  R+FD M  K+         
Sbjct: 114 SLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173

Query: 179 ------------------------------------------LITWNAMIAGYVLAGYSD 196
                                                     +I+WN+MI+GYV  G ++
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTE 233

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           +GL ++++M   G   D  T  S L  C + G++  G  +H   I S F   +    + +
Sbjct: 234 RGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRIN--FSNT 291

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KCG L  A RVF+ + +++V+SW+S+I GY ++     A+ L +Q+ +  +++D
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLD 351

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               +S++   A    ++ GK +H Y        +  V N+++DMY KCG +D A  +F+
Sbjct: 352 VVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFS 411

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M VK++++W  +I                      +++PD      +L AC+    +E 
Sbjct: 412 TMVVKDIISWNTMI---------------------GELKPDSRTMACILPACASLSALER 450

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +E    +  +     R    + +VD   + G L  A+ L + +P K  ++ W  ++S  
Sbjct: 451 GKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSKDLVS-WTVMISGY 508

Query: 497 RVHG 500
            +HG
Sbjct: 509 GMHG 512



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 155/302 (51%), Gaps = 33/302 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  LD G  +H  +       +L + N L+DMY KCG M+GA +VF  M+ +++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDI 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  ++                       +KP+  T++  + A   LS++E G +IHG 
Sbjct: 419 ISWNTMI---------------------GELKPDSRTMACILPACASLSALERGKEIHGY 457

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V N+++D+Y KCG +  A  +FD++P+K L++W  MI+GY + GY ++ 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M++ G  PDE +F S L AC   G +  G +   +++ + F    K      +V
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMV 576

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVIS----WSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           D   + G L +A   ++ IE   +      W +L+ G      +   +EL  ++ ER  +
Sbjct: 577 DLLSRTGNLSKA---YEFIETLPIAPDATIWGALLCGC----RIYHDIELAEKVAERVFE 629

Query: 315 VD 316
           ++
Sbjct: 630 LE 631



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 98/184 (53%), Gaps = 4/184 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  + + +A  L  C+    L+ G ++HG +++ G+S D  + N L+D+Y KCG +  A 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD +  +++VSWT ++ G+  +G     ++ F +M  + ++P+E +  + + A     
Sbjct: 488 LLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
            +E G +   + MK+ F   P + +   ++D+ S+ G +++A    + +P A     W A
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 185 MIAG 188
           ++ G
Sbjct: 607 LLCG 610


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 389/675 (57%), Gaps = 19/675 (2%)

Query: 28   LDYGVQLHGALVKMGFS-FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
            L  G  +HG +++ G +   + ++N L++MYAKCG +  A  +F  M   + +SW  ++ 
Sbjct: 395  LRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIIS 454

Query: 87   GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
               QNGN +  +  +  M  S + P+ F L +++ +   L  +  G Q+H   +K G + 
Sbjct: 455  ALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDL 514

Query: 147  NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS---DKGLLLFR 203
            +  V N ++ MY +CG +++  ++F+ M     ++WN M+   V+A       + + +F 
Sbjct: 515  DTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMG--VMASSQTPISEIVKVFN 572

Query: 204  KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
             M   G IP++ TF + L A   L  +  G Q+H  ++  G       V+  +L+  Y K
Sbjct: 573  NMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED--NVVDNALISCYAK 630

Query: 264  CGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
             G +     +F ++ +++  ISW+S+I GY    NL EAM+    +      +D    S 
Sbjct: 631  SGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSI 690

Query: 323  MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
            ++   A  A +E+G ++HA+  +     D  V +++VDMY KCG +D A++LFN M  +N
Sbjct: 691  ILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRN 750

Query: 383  VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
              +W  +I+GY +HGL ++A+ +F +ML     PD V +++VLSACSH+GLVE   EYF 
Sbjct: 751  EFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF- 809

Query: 443  RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD- 501
             +  D  + P+IEHYSC++D LGRAG++D+ K  I+ MP++P+  IW+T+L ACR   D 
Sbjct: 810  EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDG 869

Query: 502  --LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
              ++LGRE   +LL ++  NPVNYV+ SN HA  G W +  + R   R    KK AGRSW
Sbjct: 870  SNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSW 929

Query: 560  VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
            V ++  +H F  GD +HP T++I++ L  + + ++   G+V   +YAL+D++EE+KEE L
Sbjct: 930  VTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNA-GYVPLTEYALYDLEEENKEELL 988

Query: 620  RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
              HSEKLAI   L R          IR+ KNLRVCGDCH   + +S+++    ++RD+ R
Sbjct: 989  SYHSEKLAIAFVLTRSS-----SGPIRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIR 1043

Query: 680  FHRFEGGVCSCGDYW 694
            FH F+ G CSCGDYW
Sbjct: 1044 FHHFKDGKCSCGDYW 1058



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 216/424 (50%), Gaps = 20/424 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            LH  L+K G + DL L N L++ YAK   +  A  VFD+M ERN VSWT L+ G++ +G
Sbjct: 82  NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141

Query: 93  NAKACLSLFCQM---GSSSVKPNEFTLSTNIKA--SGVLSSVENGMQIHGMCMKSGFEWN 147
            A+    +F  M     +  +P  FT  T ++A   G    +   +Q+HG+  K+ +  N
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 148 PVVGNSIIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
             V N++I MY  C  G    A R+FD  P + LITWNA+++ Y   G       LF+ M
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261

Query: 206 QEHGE----IPDEFTFTSTLKACGSLGSVGGG-TQIHGFLITSGFPYSVKTVIAGSLVDF 260
           Q         P E TF S + A            Q+  +++ SG   S    +  +LV  
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGC--SSDLYVGSALVSA 319

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           + + G   EA+ +F  ++QK+ ++ + LI+G  +++   EA+++F   R  ++ V+    
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRN-TVDVNADTY 378

Query: 321 SSMMGVFADFALVEQGKQI----HAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELF 375
             ++   A++++ E+G +I    H +  +   + L  +VSN +V+MY KCG I+ A+++F
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF 438

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
             M   + ++W  II+   ++G  +EAV  +  M    + P   A ++ LS+C+   L+ 
Sbjct: 439 QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLT 498

Query: 436 ESQE 439
             Q+
Sbjct: 499 AGQQ 502



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 215/434 (49%), Gaps = 15/434 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  SL  C+   LL  G Q+H   VK G   D  ++N L+ MY +CG M+    VF+ M 
Sbjct: 484 LISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA 543

Query: 75  ERNVVSWTALMCGFLQNGNA--KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           E + VSW  +M G + +        + +F  M    + PN+ T    + A   LS +E G
Sbjct: 544 EHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG 602

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
            Q+H   MK G   + VV N++I  Y+K G +     +F  M   +  I+WN+MI+GY+ 
Sbjct: 603 KQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIY 662

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   + +     M   G+I D  TF+  L AC S+ ++  G ++H F I S     V  
Sbjct: 663 NGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDV-- 720

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V+  +LVD Y KCG +  A ++F+ + Q++  SW+S+I GYA+     +A+E+F ++   
Sbjct: 721 VVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRS 780

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSN--SIVDMYLKCGLI 368
               D     S++   +   LVE+G +   Y   +P  G+   + +   ++D+  + G I
Sbjct: 781 RESPDHVTFVSVLSACSHAGLVERGLE---YFEMMPDHGILPQIEHYSCVIDLLGRAGKI 837

Query: 369 DEATELFNEMPVK-NVVTW-TVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVL 425
           D+  E    MP++ N + W TV++        +   +G     +L ++EP + V Y+   
Sbjct: 838 DKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLAS 897

Query: 426 SACSHSGLVEESQE 439
           +  + +G+ E++ +
Sbjct: 898 NFHAATGMWEDTAK 911



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 240/488 (49%), Gaps = 15/488 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALM 85
           L + VQ+HG + K  ++ +  + N LI MY  C  G    A  VFD    R++++W ALM
Sbjct: 183 LGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALM 242

Query: 86  CGFLQNGNAKACLSLF--CQMGSSSV--KPNEFTLSTNIKASGVLSSVENGM-QIHGMCM 140
             + + G+  +  +LF   Q G S +  +P E T  + I A+ + S     + Q+    +
Sbjct: 243 SVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVL 302

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG   +  VG++++  +++ G  +EA  +F  +  K+ +T N +I G V   +S++ + 
Sbjct: 303 KSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVK 362

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI----HGFLITSGFPYSVKTVIAGS 256
           +F   +   ++  + T+   L A         G +I    HG ++ +G    +K  ++  
Sbjct: 363 IFVGTRNTVDVNAD-TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLT-DLKIAVSNG 420

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LV+ Y KCG +  A ++F L+E    ISW+++I    Q  N  EA+  +  +R+  +   
Sbjct: 421 LVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPS 480

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F L S +   A   L+  G+Q+H  A K    LDTSVSN +V MY +CG + +  ++FN
Sbjct: 481 NFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540

Query: 377 EMPVKNVVTW-TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            M   + V+W T++           E V +F  M+   + P+ V ++ +L+A S   ++E
Sbjct: 541 SMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLE 600

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             ++  + +     M+  +   + ++    ++G +   ++L  +M  +     W +++S 
Sbjct: 601 LGKQVHAAVMKHGVMEDNVVD-NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISG 659

Query: 496 CRVHGDLE 503
              +G+L+
Sbjct: 660 YIYNGNLQ 667



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 127/229 (55%), Gaps = 1/229 (0%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+  +    + L   S   +L+ G Q+H A++K G   D +++N LI  YAK G+M    
Sbjct: 579 LIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCE 638

Query: 68  AVFDKMLE-RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +F  M + R+ +SW +++ G++ NGN +  +     M  S    +  T S  + A   +
Sbjct: 639 HLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASV 698

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++E GM++H   ++S  E + VV ++++DMYSKCGR++ A+++F+ M  ++  +WN+MI
Sbjct: 699 AALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMI 758

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           +GY   G   K + +F +M    E PD  TF S L AC   G V  G +
Sbjct: 759 SGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLE 807



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 27/168 (16%)

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  + N +V+ Y K   +  A+++F+EMP +N V+WT +++GY  HG+A+EA  +FR ML
Sbjct: 95  DLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML 154

Query: 411 LD---DVEPDGVAYLAVLSACSHS------------GLVEESQEYFSRLCNDKRMKPRIE 455
            +      P    +  +L AC               GLV ++ EY S   N       I 
Sbjct: 155 REVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKT-EYAS---NTTVCNALIS 210

Query: 456 HY-SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            Y SC V      G    A+ + +  P++  I  W  L+S     GD+
Sbjct: 211 MYGSCTV------GPPILAQRVFDGTPIRDLIT-WNALMSVYAKKGDV 251


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/663 (34%), Positives = 387/663 (58%), Gaps = 8/663 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++  G + +  L+N L++ Y  CG +  A  +F     +NVVSWT L+ G  +N 
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + +F +M   + KPN  T+S+ + A   L  +     +H   ++ GFE N  V  
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMYSK G +  A ++F+ M  +++++WNA+++GY   G+S++ + LF  M+  G + 
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +T  S + A  S+G +  GT IHGF+I +G  Y     I  +L+D YV   C+ +A R
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG--YENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFA 331
           VF  +  K V +W+ ++ G++   +   A++ F + L  ++L++D  VL  ++   +   
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSG 339

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            ++QG+++HA A K     +  V ++++DMY  CG +++A   F  M  K+VV W  +I 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           G G +G   +A+ LF +M    ++PD   +++VL ACSH+G+V E  + F  +       
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI 459

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P ++HY+C++D LGRAG+LD A + I +MP +P   ++ TLL ACR+HG+++LG E+ + 
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           +  ++ ++   YV++SN++A AG+W   +  R   RSK LKK  G S +E+++EI+ F  
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMA 579

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           G+  HP   KI  +L  +  ++K+  G+V      L D+ ++ K++ L  HSEK+AI   
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKA-GYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFG 638

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L+R     +PG +IR+ KNLR C DCH   K +SK+   V V++DA RFH F+ GVCSC 
Sbjct: 639 LMR----TKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCR 694

Query: 692 DYW 694
           DYW
Sbjct: 695 DYW 697



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+     +H   V+ GF  ++ +   L+DMY+K G M  A  +F+ M ERNVVSW A++ 
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVS 196

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  +G ++  + LF  M    +  + +T+ + I AS  +  ++ G  IHG  +++G+E 
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  +  +++D+Y     +++A R+F  M  K +  W  M+ G+    + D+ +  F KM 
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316

Query: 207 EHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
               +  D       L +C   G++  G ++H   I + F  ++   +  +++D Y  CG
Sbjct: 317 GIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNI--FVGSAVIDMYANCG 374

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +A+R F  + +K V+ W+++I G        +A++LF Q++   L  D     S++ 
Sbjct: 375 NLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLY 434

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NV 383
             +   +V +G QI  +  K    +      + ++D+  + G +D A    N MP + + 
Sbjct: 435 ACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDF 494

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             ++ ++     HG  K    + +K+   ++EP+   Y  +LS
Sbjct: 495 DVYSTLLGACRIHGNIKLGHEISQKIF--EMEPNDAGYYVLLS 535



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 10/182 (5%)

Query: 337 KQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +QIHA    + SGL  +T +SNS+++ Y+ CGL+ +A ++F+  P KNVV+WT++I+G  
Sbjct: 41  QQIHAQI--ITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLA 98

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR--MKP 452
           K+    EA+ +FR+M + + +P+ V   +VL A ++ GL+  ++   S  C   R   + 
Sbjct: 99  KNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK---SVHCFWVRGGFEG 155

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +   + +VD   + G +  A+ L ESM  + ++  W  ++S    HG  E   ++  ++
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSER-NVVSWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 513 LR 514
            R
Sbjct: 215 RR 216



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS +  L  G ++H   +K  F+ ++ + + +IDMYA CG +  A   F  M E++V
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W A++ G   NG     + LF QM  S + P+E T  + + A      V  G+QI   
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 139 CMKSGFEWNPVVGNS-IIDMYSKCGRINEAARMFDVMP 175
            +K+  +   +   + +ID+  + G+++ A    + MP
Sbjct: 452 MVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/570 (38%), Positives = 348/570 (61%), Gaps = 9/570 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++  G ++H   +K+ +E    +   +I +Y+KC  + +A R+ D MP +++++W AMI
Sbjct: 24  TAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMI 83

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY   GY+ + L LF +M   G  P+EFTF + L +C S      G QIH  +I + F 
Sbjct: 84  SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 143

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +   +  SL+D Y K G + EARRVFD + ++ V+S +++I GYAQ     EA++LFR
Sbjct: 144 SHI--FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 201

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +L+   ++ +    +S++   +  A ++ G+Q+H++  +        + NS++DMY KCG
Sbjct: 202 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 261

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVL 425
            +  +  +F+ MP + V++W  ++ GY KHGL +EAV LF+ M  ++ V+PD V +LAVL
Sbjct: 262 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321

Query: 426 SACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           S CSH G+ +   E F  + N K   +P IEHY C+VD  GRAGR++EA   I+ MP +P
Sbjct: 322 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 381

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           + AIW +LL ACRVH ++ +G  V   LL ++ +N  NYV++SN++A AG W++   +R+
Sbjct: 382 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 441

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           L + K + K  GRSW+E+D+ +H F+  D +HP  E++   + E+  ++KE  G+V  + 
Sbjct: 442 LMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA-GYVPELS 500

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             L+D+ +E KE+ L+ HSEKLA+   L+        G  +R+ KNLR+C DCH F K L
Sbjct: 501 CVLYDVDDEQKEKILQGHSEKLALAFGLI----CTPGGTPVRIIKNLRICVDCHNFAKFL 556

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S++      +RD  RFH   GG CSCGDYW
Sbjct: 557 SRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 223/409 (54%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     +  G ++H  ++K  +   + L   LI +Y KC  +  A  V D+M ERNVVSW
Sbjct: 20  CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++ G+ Q G A   L LF +M  S   PNEFT +T + +    S  + G QIH + +K
Sbjct: 80  TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 139

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           + FE +  VG+S++DMY+K G+I EA R+FD +P + +++  A+I+GY   G  ++ L L
Sbjct: 140 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 199

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           FR++Q  G   +  T+ S L A   L ++  G Q+H  ++ +  P+ V  V+  SL+D Y
Sbjct: 200 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYV--VLQNSLIDMY 257

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVL 320
            KCG L  +RR+FD + +++VISW+++++GY++     EA+ELF+ ++E + ++ D    
Sbjct: 258 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 317

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   + ++G +I         G +  + +   +VD++ + G ++EA E   +M
Sbjct: 318 LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 377

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P +     W  ++     H      +G F    L ++E +      +LS
Sbjct: 378 PFEPTAAIWGSLLGACRVH--QNVHIGEFVARRLLEIESENAGNYVILS 424



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 152/280 (54%), Gaps = 8/280 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+ +     G Q+H  ++K  F   + + + L+DMYAK G++  A  VFD + 
Sbjct: 114 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LF ++    ++ N  T ++ + A   L+++++G Q
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 233

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +++   +  V+ NS+IDMYSKCG +  + R+FD MP +++I+WNAM+ GY   G 
Sbjct: 234 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 293

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + + LF+ M+E  ++ PD  TF + L  C   G    G +I   ++     +  +   
Sbjct: 294 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 353

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLI 289
            G +VD + + G + EA   F+ I+    + +   W SL+
Sbjct: 354 YGCVVDLFGRAGRVEEA---FEFIKKMPFEPTAAIWGSLL 390


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/570 (38%), Positives = 348/570 (61%), Gaps = 9/570 (1%)

Query: 127  SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +++  G ++H   +K+ +E    +   +I +Y+KC  + +A R+ D MP +++++W AMI
Sbjct: 491  TAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMI 550

Query: 187  AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            +GY   GY+ + L LF +M   G  P+EFTF + L +C S      G QIH  +I + F 
Sbjct: 551  SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 610

Query: 247  YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
              +   +  SL+D Y K G + EARRVFD + ++ V+S +++I GYAQ     EA++LFR
Sbjct: 611  SHI--FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668

Query: 307  QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            +L+   ++ +    +S++   +  A ++ G+Q+H++  +        + NS++DMY KCG
Sbjct: 669  RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 728

Query: 367  LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVL 425
             +  +  +F+ MP + V++W  ++ GY KHGL +EAV LF+ M  ++ V+PD V +LAVL
Sbjct: 729  SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788

Query: 426  SACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            S CSH G+ +   E F  + N K   +P IEHY C+VD  GRAGR++EA   I+ MP +P
Sbjct: 789  SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 848

Query: 485  SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
            + AIW +LL ACRVH ++ +G  V   LL ++ +N  NYV++SN++A AG W++   +R+
Sbjct: 849  TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 908

Query: 545  LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
            L + K + K  GRSW+E+D+ +H F+  D +HP  E++   + E+  ++KE  G+V  + 
Sbjct: 909  LMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA-GYVPELS 967

Query: 605  YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
              L+D+ +E KE+ L+ HSEKLA+   L+        G  +R+ KNLR+C DCH F K L
Sbjct: 968  CVLYDVDDEQKEKILQGHSEKLALAFGLI----CTPGGTPVRIIKNLRICVDCHNFAKFL 1023

Query: 665  SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            S++      +RD  RFH   GG CSCGDYW
Sbjct: 1024 SRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 223/409 (54%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     +  G ++H  ++K  +   + L   LI +Y KC  +  A  V D+M ERNVVSW
Sbjct: 487 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 546

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++ G+ Q G A   L LF +M  S   PNEFT +T + +    S  + G QIH + +K
Sbjct: 547 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 606

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           + FE +  VG+S++DMY+K G+I EA R+FD +P + +++  A+I+GY   G  ++ L L
Sbjct: 607 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           FR++Q  G   +  T+ S L A   L ++  G Q+H  ++ +  P+ V  V+  SL+D Y
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYV--VLQNSLIDMY 724

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVL 320
            KCG L  +RR+FD + +++VISW+++++GY++     EA+ELF+ ++E + ++ D    
Sbjct: 725 SKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF 784

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   + ++G +I         G +  + +   +VD++ + G ++EA E   +M
Sbjct: 785 LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P +     W  ++     H      +G F    L ++E +      +LS
Sbjct: 845 PFEPTAAIWGSLLGACRVH--QNVHIGEFVARRLLEIESENAGNYVILS 891



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 160/301 (53%), Gaps = 8/301 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+ +     G Q+H  ++K  F   + + + L+DMYAK G++  A  VFD + 
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LF ++    ++ N  T ++ + A   L+++++G Q
Sbjct: 641 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 700

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +++   +  V+ NS+IDMYSKCG +  + R+FD MP +++I+WNAM+ GY   G 
Sbjct: 701 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + + LF+ M+E  ++ PD  TF + L  C   G    G +I   ++     +  +   
Sbjct: 761 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLILGYAQEENLAEAMELFRQLR 309
            G +VD + + G + EA   F+ I+    + +   W SL+      +N+     + R+L 
Sbjct: 821 YGCVVDLFGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL 877

Query: 310 E 310
           E
Sbjct: 878 E 878


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/664 (34%), Positives = 383/664 (57%), Gaps = 12/664 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  +VK+G+  +  +   LI+ Y+ CG ++ A  VF+ +L +++V W  ++  +++NG 
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  L L   M  +   PN +T  T +KAS  L + +    +HG  +K+ +  +P VG  
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++ +Y++ G +++A ++F+ MP   ++ W+ MIA +   G+ ++ + LF +M+E   +P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           EFT +S L  C      G G Q+HG ++  GF   +   ++ +L+D Y KC  +  A ++
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI--YVSNALIDVYAKCEKMDTAVKL 405

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAE---AMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           F  +  K+ +SW+++I+GY   ENL E   A  +FR+     + V     SS +G  A  
Sbjct: 406 FAELSSKNEVSWNTVIVGY---ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A ++ G Q+H  A K  +    +VSNS++DMY KCG I  A  +FNEM   +V +W  +I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +GY  HGL ++A+ +   M   D +P+G+ +L VLS CS++GL+++ QE F  +  D  +
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P +EHY+C+V  LGR+G+LD+A  LIE +P +PS+ IW+ +LSA     + E  R   E
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L+++  +   YV++SN++A A  W     +RK  +  G+KK  G SW+E   ++H+F 
Sbjct: 643 EILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS 702

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            G   HP  + I+ +L  +  +     G+V      L D+ +E K++ L VHSE+LA+  
Sbjct: 703 VGLSDHPDMKLINGMLEWLNMKATRA-GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            LVR   +      I + KNLR+C DCH  +K +S I++   V+RD  RFH F  GVCSC
Sbjct: 762 GLVRMPSSRNR---ILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSC 818

Query: 691 GDYW 694
           GD+W
Sbjct: 819 GDHW 822



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 241/496 (48%), Gaps = 18/496 (3%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           RC  KN  +     +H  ++K G   DL   N L++ Y K G    A  +FD+M ERN V
Sbjct: 58  RCIQKNDPIS-AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNV 116

Query: 80  SWTALMCGFLQNGNAKAC---LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           S+  L  G+       AC   + L+ ++     + N    ++ +K    L   E    +H
Sbjct: 117 SFVTLAQGY-------ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K G++ N  VG ++I+ YS CG ++ A  +F+ +  K ++ W  +++ YV  GY +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L L   M+  G +P+ +TF + LKA   LG+      +HG ++ +   Y +   +   
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC--YVLDPRVGVG 287

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y + G + +A +VF+ + +  V+ WS +I  + Q     EA++LF ++RE  +  +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F LSS++   A       G+Q+H    KV   LD  VSN+++D+Y KC  +D A +LF 
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           E+  KN V+W  +I GY   G   +A  +FR+ L + V    V + + L AC+    ++ 
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +           K ++   + ++D   + G +  A+++   M     +A W  L+S  
Sbjct: 468 GVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGY 525

Query: 497 RVHGDLELGREVGEIL 512
             HG   LGR+   IL
Sbjct: 526 STHG---LGRQALRIL 538



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 202/368 (54%), Gaps = 6/368 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            D+   +HG ++K  +  D  +   L+ +Y + G+M+ A  VF++M + +VV W+ ++  
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F QNG     + LF +M  + V PNEFTLS+ +    +      G Q+HG+ +K GF+ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V N++ID+Y+KC +++ A ++F  + +K+ ++WN +I GY   G   K   +FR+   
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           +     E TF+S L AC SL S+  G Q+HG  I +    + K  ++ SL+D Y KCG +
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN--NAKKVAVSNSLIDMYAKCGDI 500

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A+ VF+ +E   V SW++LI GY+      +A+ +   +++R  + +G     ++   
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
           ++  L++QG++      +   G++  + +   +V +  + G +D+A +L   +P + +V+
Sbjct: 561 SNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619

Query: 385 TWTVIITG 392
            W  +++ 
Sbjct: 620 IWRAMLSA 627


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/658 (37%), Positives = 375/658 (56%), Gaps = 7/658 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++H  + KMGF  D+ +   L+ +Y++ G ++ A  VF  M  ++V SW A++ GF Q
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NGNA   L +  +M    VK +  T+++ +        V NG+ IH   +K G + +  V
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I+MYSK GR+ +A  +FD M  + L++WN++IA Y         L  F+ MQ  G 
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  T  S       L        I GF+I   +      VI  +LV+ Y K G +  A
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREW-LDKDVVIGNALVNMYAKLGYMNCA 378

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDGFVLSSMMGVFAD 329
             VFD + +K  ISW++L+ GY Q    +EA++ +  + E R    +     S++  ++ 
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++QG +IHA   K    LD  V+  ++D+Y KCG +++A  LF E+P    V W  I
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG  +EA+ LF+ ML + V+ D + ++++LSACSHSGLV+E Q+ F  +  +  
Sbjct: 499 IASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG 558

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +KP ++HY C+VD LGRAG L++A  L+ +MP++P  +IW  LLSAC+++G+ ELG    
Sbjct: 559 IKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLAS 618

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + LL +D +N   YV++SNI+A+   W    ++R LAR +GL+K  G S V V  +   F
Sbjct: 619 DRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVF 678

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
           Y G+ THP   +I++ L  +  +MK  LG+V    +   DI+E+ KE+ L  HSE+LAI 
Sbjct: 679 YTGNQTHPKYTEIYKELKVLSAKMK-SLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIA 737

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
                G ++  P   IR+FKNLRVCGDCH   K +S+I +   VVRD+ RFH F+ G+
Sbjct: 738 F----GIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 256/474 (54%), Gaps = 13/474 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  L+  G S +++L+  LI++Y   G+++ + + FD + ++N+ SW +++  +++ G
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 93  N---AKACLS-LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
               A  C++ LF   G   ++P+ +T    +KA     S+ +G ++H    K GFE + 
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFKMGFEDDV 156

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V  S++ +YS+ G ++ A ++F  MP K + +WNAMI+G+   G +   L +  +M+  
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G   D  T  S L  C     V  G  IH  ++  G    V   ++ +L++ Y K G L 
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV--FVSNALINMYSKFGRLQ 274

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A+ VFD +E + ++SW+S+I  Y Q  + + A+  F+ ++   ++ D   + S+  +F+
Sbjct: 275 DAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 329 DFALVEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
             +     + I  +  +      D  + N++V+MY K G ++ A  +F+++P K+ ++W 
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 388 VIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
            ++TGY ++GLA EA+  +  M    D  P+   +++++ A SH G +++  +  ++L  
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIK 454

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +  +   +   +C++D  G+ GRL++A +L   +P   S+  W  ++++  +HG
Sbjct: 455 NS-LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHG 506



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 215/419 (51%), Gaps = 14/419 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+++  +  GV +H  ++K G   D+ ++N LI+MY+K G +  A  VFD+M 
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R++VSW +++  + QN +    L  F  M    ++P+  T+ +       LS       
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344

Query: 135 IHGMCMKSGFEW---NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           I G  ++   EW   + V+GN++++MY+K G +N A  +FD +P K  I+WN ++ GY  
Sbjct: 345 ILGFVIRR--EWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402

Query: 192 AGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            G + + +  +  M+E    IP++ T+ S + A   +G++  G +IH  LI +     V 
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV- 461

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +A  L+D Y KCG L +A  +F  I + + + W+++I          EA++LF+ +  
Sbjct: 462 -FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA 520

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLI 368
             ++ D     S++   +   LV++G++      K   G+  S+ +   +VD+  + G +
Sbjct: 521 ERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQK-EYGIKPSLKHYGCMVDLLGRAGYL 579

Query: 369 DEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++A EL   MP++ +   W  +++    +G A+  +G      L +V+ + V Y  +LS
Sbjct: 580 EKAYELVRNMPIQPDASIWGALLSACKIYGNAE--LGTLASDRLLEVDSENVGYYVLLS 636



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           V   K++HA         +  +S  ++++Y+  G I  +   F+ +  KN+ +W  II+ 
Sbjct: 35  VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISA 94

Query: 393 YGKHGLAKEAVGLFRKMLL----DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           Y + G   EA+    ++        + PD   +  +L AC    LV+  + +    C   
Sbjct: 95  YVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVDGKKVH----CCVF 148

Query: 449 RMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +M    + +  + +V    R G LD A  +   MPVK  +  W  ++S
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMIS 195


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/708 (34%), Positives = 382/708 (53%), Gaps = 40/708 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K+     G+Q+HG +VKMG++ DL + N L+  YA+CGE++ A  VFD+M ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSWT+++CG+ +   AK  + LF +M     V PN  T+   I A   L  +E G +++ 
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
               SG E N ++ ++++DMY KC  I+ A R+FD   A +L   NAM + YV  G + +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L +F  M + G  PD  +  S + +C  L ++  G   HG+++ +GF       I  +L
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNAL 378

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL---- 313
           +D Y+KC     A R+FD +  K+V++W+S++ GY +   +  A E F  + E+++    
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438

Query: 314 ----------------------------QVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
                                         DG  + S+         ++  K I+ Y  K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               LD  +  ++VDM+ +CG  + A  +FN +  ++V  WT  I      G A+ A+ L
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M+   ++PDGVA++  L+ACSH GLV++ +E F  +     + P   HY C+VD LG
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L+EA  LIE MP++P+  IW +LL+ACRV G++E+     E +  L  +   +YV+
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL 678

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A AG WN+  ++R   + KGL+K  G S +++  + H F  GD++HP    I  +
Sbjct: 679 LSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L E+ +R    LG V  +   L D+ E+ K   L  HSEKLA+   L+    +   G  I
Sbjct: 739 LDEVSQR-ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLI----SSNKGTTI 793

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           R+ KNLRVC DCH F K  SK+     ++RD  RFH    G CSCGD+
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 249/534 (46%), Gaps = 78/534 (14%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           + +L+ G+  +G     + LF +M +S + P+++T    + A     +  NG+QIHG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G+  +  V NS++  Y++CG ++ A ++FD M  +++++W +MI GY    ++   + 
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 201 LFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           LF +M    E+ P+  T    + AC  L  +  G +++ F+  SG    V  ++  +LVD
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y+KC  +  A+R+FD     ++   +++   Y ++    EA+ +F  + +  ++ D   
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKC------------ 365
           + S +   +    +  GK  H Y  +  +G ++  ++ N+++DMY+KC            
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 366 -------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                              G +D A E F  MP KN+V+W  II+G  +  L +EA+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 407 RKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQE-YFSRLCNDKRMKPRIEHYSCIVDSL 464
             M   + V  DGV  +++ SAC H G ++ ++  Y+    N  ++  R+   + +VD  
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMF 515

Query: 465 GRAGRLDEAKNLIESMP----------------------------------VKPSIAIWQ 490
            R G  + A ++  S+                                   +KP    + 
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERL 542
             L+AC   G ++ G+E+   +L+L G +P  V+Y  M ++   AG   E  +L
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 36/313 (11%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  +  ++  CS+   + +G   HG +++ GF     + N LIDMY KC   + A  +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKA-------------------------------CLS 99
           D+M  + VV+W +++ G+++NG   A                                + 
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455

Query: 100 LFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
           +FC M S   V  +  T+ +   A G L +++    I+    K+G + +  +G +++DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           S+CG    A  +F+ +  + +  W A I    +AG +++ + LF  M E G  PD   F 
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575

Query: 219 STLKACGSLGSVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DL 276
             L AC   G V  G +I +  L   G   S + V  G +VD   + G L EA ++  D+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGV--SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633

Query: 277 IEQKSVISWSSLI 289
             + + + W+SL+
Sbjct: 634 PMEPNDVIWNSLL 646



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 11/265 (4%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC---LVEARRVFD 275
           S+LK C ++  +      H  L   G    V T+    LV    + G    L  A+ VF+
Sbjct: 37  SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTIT--KLVARSCELGTRESLSFAKEVFE 91

Query: 276 LIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             E   +   ++SLI GYA      EA+ LF ++    +  D +     +   A      
Sbjct: 92  NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
            G QIH    K+    D  V NS+V  Y +CG +D A ++F+EM  +NVV+WT +I GY 
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211

Query: 395 KHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
           +   AK+AV LF +M+ D +V P+ V  + V+SAC+    +E  ++ ++ + N   ++  
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVN 270

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIE 478
               S +VD   +   +D AK L +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFD 295


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/730 (33%), Positives = 390/730 (53%), Gaps = 46/730 (6%)

Query: 4   VSFSLVSERQRLA---DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA-- 58
           +SFS  S   +L     SL   S    L    Q+H  ++K G        + LI+  A  
Sbjct: 14  LSFSDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVS 73

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
             G+++ A ++F  +   N V W  ++ G   + +    L  +  M SS  +PNE+T  +
Sbjct: 74  PHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPS 133

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR--------------- 163
             K+   +     G Q+H   +K G E N  V  S+I+MY++ G                
Sbjct: 134 IFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRD 193

Query: 164 ----------------INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
                           ++EA  +FD +P + +++WNAMI+GY  +G  ++ +  F +M+ 
Sbjct: 194 AVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRR 253

Query: 208 HGEIPDEFTFTSTLKACGSLG-SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
               P+  T  S L AC   G S+  G  +  ++   G   +++ V    L+D YVKCG 
Sbjct: 254 AKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV--NGLIDMYVKCGD 311

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L EA  +F+ I+ K+V+SW+ +I GY       EA+ LFR++ + ++  +     S++  
Sbjct: 312 LEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPA 371

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVV 384
            A+   ++ GK +HAY  K    +  +V+   S++DMY KCG +  A  +F+ M  K++ 
Sbjct: 372 CANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           TW  +I+G+  HG    A+GLF +M  +   PD + ++ VL+AC H+GL+   + YFS +
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D ++ P++ HY C++D  GRAG  DEA+ L+++M +KP  AIW +LL ACR+H  +EL
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIEL 551

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
              V + L  L+ +NP  YV++SNI+A AG W +  ++R       +KKV G S +EVD 
Sbjct: 552 AESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDS 611

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            +H F  GD  HP + +I+++L E++ R+ E+ GFV      L+D+ EE KE  L  HSE
Sbjct: 612 VVHEFLVGDKVHPQSNEIYKMLDEIDMRL-EKAGFVPDTSEVLYDMDEEWKEGVLSHHSE 670

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLAI   L+    + +PG  IR+ KNLRVCG+CH   K +SKI     + RD  RFH F+
Sbjct: 671 KLAIAFGLI----STKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFK 726

Query: 685 GGVCSCGDYW 694
            G CSC DYW
Sbjct: 727 DGSCSCKDYW 736


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/663 (35%), Positives = 380/663 (57%), Gaps = 8/663 (1%)

Query: 31   GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            G+  HG +VK+GF     + N LI  YAK   +  A  VF++M  ++ +SW +++ G   
Sbjct: 436  GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSS 495

Query: 91   NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            NG     + LF +M +   + +  TL + + A         G  +HG  +K+G      +
Sbjct: 496  NGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSL 555

Query: 151  GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             N+++DMYS C       ++F  M  K++++W AMI  Y+ AG  DK   L ++M   G 
Sbjct: 556  ANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGI 615

Query: 211  IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             PD F  TS L A     S+  G  +HG+ I +G    +   +A +L++ YVKC  + EA
Sbjct: 616  RPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLP--VANALMEMYVKCRNVEEA 673

Query: 271  RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R +FD +  K VISW++LI GY++     E+  LF  +  +  + +   ++ ++   A  
Sbjct: 674  RLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASI 732

Query: 331  ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
            + +E+G++IHAYA +     D+  SN++VDMY+KCG +  A  LF+ +  KN+++WT++I
Sbjct: 733  SSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 792

Query: 391  TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             GYG HG  K A+ LF +M    +EPD  ++ A+L AC HSGL  E + +F  +  + ++
Sbjct: 793  AGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKI 852

Query: 451  KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            +P+++HY+CIVD L R G L EA   IESMP++P  +IW +LL  CR+H +++L  +V +
Sbjct: 853  EPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVAD 912

Query: 511  ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
             + +L+ +N   YV+++NI+A+A  W   ++L+     +GL++  G SW+EV  ++H F 
Sbjct: 913  KVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFI 972

Query: 571  GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
              +  HP   +I + L ++ +RM++E G     KYAL    +   +E+L  HS KLA+  
Sbjct: 973  ADNRNHPDWNRIAEFLDDVARRMRQE-GHDPKKKYALMGADDAVHDEALCGHSSKLAVAF 1031

Query: 631  ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
                G LN   G+ IRV KN +VC  CHE  K +SK+     ++RD++RFHRFEGG CSC
Sbjct: 1032 ----GVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSC 1087

Query: 691  GDY 693
              Y
Sbjct: 1088 RGY 1090



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 248/505 (49%), Gaps = 28/505 (5%)

Query: 48  MLNNDLIDMYAKCGEMNGACAVFDKMLER--NVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           +L   L+  Y KCG++  A  VFD M  +  +V  WT+LM  + + G+ +  +SLF QM 
Sbjct: 137 VLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQ 196

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              V P+   +S  +K    L S+  G  IHG+  K G      V N++I +YS+CGR+ 
Sbjct: 197 CCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRME 256

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +AAR+FD M  +  I+WN+MI G    G+    + LF KM   G      T  S L AC 
Sbjct: 257 DAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACA 316

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAG--------SLVDFYVKCGCLVEARRVFDLI 277
            LG    G  +HG+ + SG  + + +V +G         LV  YVKCG +  ARRVFD +
Sbjct: 317 GLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAM 376

Query: 278 EQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
             K +V  W+ ++ GYA+     E++ LF Q+ E  +  D   +S ++      +    G
Sbjct: 377 SSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDG 436

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
              H Y  K+  G   +V N+++  Y K  +I +A  +FN MP ++ ++W  +I+G   +
Sbjct: 437 LVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSN 496

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS-RLCNDKRMKP--- 452
           GL  EA+ LF +M     E D V  L+VL AC+      +S+ +F+ R+ +   +K    
Sbjct: 497 GLNSEAIELFIRMWTQGQELDSVTLLSVLPACA------QSRYWFAGRVVHGYSVKTGLI 550

Query: 453 -RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
                 + ++D             +  SM  K ++  W  ++++    G   L  +V  +
Sbjct: 551 GETSLANALLDMYSNCSDWQSTNQIFRSMGQK-NVVSWTAMITSYMRAG---LFDKVAGL 606

Query: 512 L--LRLDGDNPVNYVMMSNIHADAG 534
           L  + LDG  P  + + S +HA AG
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAG 631



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 248/539 (46%), Gaps = 45/539 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+C S    L  G  +HG L K+G      + N LI +Y++CG M  A  VFD M  R+ 
Sbjct: 211 LKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDA 270

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++ G   NG     + LF +M S   + +  T+ + + A   L     G  +HG 
Sbjct: 271 ISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGY 330

Query: 139 CMKSGFEW----------NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI-TWNAMIA 187
            +KSG  W          +  +G+ ++ MY KCG +  A R+FD M +K  +  WN ++ 
Sbjct: 331 SVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMG 390

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G  ++ L LF +M E G  PDE   +  LK    L     G   HG+++  GF  
Sbjct: 391 GYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF-- 448

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
             +  +  +L+ FY K   + +A  VF+ + ++  ISW+S+I G +     +EA+ELF +
Sbjct: 449 GAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIR 508

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +  +  ++D   L S++   A       G+ +H Y+ K     +TS++N+++DMY  C  
Sbjct: 509 MWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 568

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
                ++F  M  KNVV+WT +IT Y + GL  +  GL ++M+LD + PD  A  + L A
Sbjct: 569 WQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHA 628

Query: 428 CS-----------HSGLVEESQEYF-------------------SRLCNDKRMKPRIEHY 457
            +           H   +    E                     +RL  D+     +  +
Sbjct: 629 FAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISW 688

Query: 458 SCIVDSLGRAGRLDEAKNLIESM--PVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           + ++    R    +E+ +L   M    +P+      +L A      LE GRE+    LR
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALR 747



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 206/411 (50%), Gaps = 9/411 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++     G  +HG  VK G   +  L N L+DMY+ C +      +F  M ++NV
Sbjct: 525 LPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNV 584

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++  +++ G       L  +M    ++P+ F +++ + A     S++ G  +HG 
Sbjct: 585 VSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGY 644

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G E    V N++++MY KC  + EA  +FD +  K +I+WN +I GY    + ++ 
Sbjct: 645 TIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNES 704

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF  M      P+  T T  L A  S+ S+  G +IH + +  GF     +  + +LV
Sbjct: 705 FSLFSDMLLQFR-PNAVTMTCILPAAASISSLERGREIHAYALRRGFLED--SYASNALV 761

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D YVKCG L+ AR +FD + +K++ISW+ +I GY        A+ LF Q+R   ++ D  
Sbjct: 762 DMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAA 821

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
             S+++       L  +G++    A +    ++  + +   IVD+  + G + EA E   
Sbjct: 822 SFSAILYACCHSGLAAEGRRFFK-AMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIE 880

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MP++ +   W  ++ G   H   K A  +  K+    +EP+   Y  +L+
Sbjct: 881 SMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVF--KLEPENTGYYVLLA 929



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 148/304 (48%), Gaps = 13/304 (4%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS--VKTVIAGSLVDFYVKCGCLVEA 270
           D  ++   ++ CG   S+    + H  +  S    +    +V+   LV  Y+KCG L EA
Sbjct: 96  DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEA 155

Query: 271 RRVFDLIEQKS--VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           R VFD +  ++  V  W+SL+  YA+  +  EA+ LFRQ++   +  D   +S ++   +
Sbjct: 156 RTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               + +G+ IH    K+  G   +V+N+++ +Y +CG +++A  +F+ M  ++ ++W  
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS--HSGLVEESQEYFS---- 442
           +I G   +G    AV LF KM     E   V  L+VL AC+    GL+ ++   +S    
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335

Query: 443 RLCNDKRMKPRIEHY---SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            L     ++  I+     S +V    + G +  A+ + ++M  K ++ +W  ++      
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395

Query: 500 GDLE 503
           G+ E
Sbjct: 396 GEFE 399


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/697 (36%), Positives = 403/697 (57%), Gaps = 16/697 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +   +   L   L  C+     + G  +HG  VK G+     ++N L+DMYAKCGEM  A
Sbjct: 160 TAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADA 219

Query: 67  -CAVFDKM--LERNVVSWTALMCGFLQNGNAKACLSLF--CQMGSSSVKPNEFTLSTNIK 121
            CA  +      RNVVSW  ++ G+ +NG A A   L    QM    V  +E T+ + + 
Sbjct: 220 ECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLP 279

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWN-PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
               L  +    ++H   ++ G      +V N++I  Y +CG +  A R+FD + +K + 
Sbjct: 280 VCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVS 339

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           +WNA+I  +   G +   + LFR+M    G+ PD F+  S L ACG+L  +  G   HGF
Sbjct: 340 SWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGF 399

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           ++ +G      + I  SL+  Y++CG    AR +FD +E+K  +SW+++I GY+Q     
Sbjct: 400 ILRNGL--EKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPG 457

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFA--DFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           E+++LFR+++ +       +L++   + A  +   V  GK++H +A K     D+ +S+S
Sbjct: 458 ESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSS 517

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           I+DMY KCG +D+A   F+ +  K+ V+WTV+ITGY  +G  KEAVGL+ KM  + +EPD
Sbjct: 518 IIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPD 577

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
           G  YL +L AC H+G++E+   +F  + N  +++ ++EHY+C++  L RAGR  +A  L+
Sbjct: 578 GFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALM 637

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           E MP +P   I  ++LSAC +HG++ELG++V + LL L+     +YV+ SN++A +  W+
Sbjct: 638 EVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWD 697

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  ++RK+ R  G+ K  G SW+++  +++ F  G+++ P   K+ ++   +E++++   
Sbjct: 698 EMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAA- 756

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+       LH+++EE K E+LR HSEK AI   L+R      P KV RVFKN+R+C DC
Sbjct: 757 GYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLR---TAGPTKV-RVFKNIRMCKDC 812

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H   K +SK+     VVRD  RFH F  G+CSCGDYW
Sbjct: 813 HNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 258/515 (50%), Gaps = 34/515 (6%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFS-FDLMLNNDLIDMYAKCGE 62
            S  +  +R  L  +L+ C      D G Q+H    K+G +  D  + N L+ MY +CG 
Sbjct: 59  ASDGVAPDRFTLPPALKSCRG----DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGR 114

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF--C--QMGSSSVKPNEFTLST 118
           ++ A  VF+ M  RN+VSW ALM       + +  L LF  C   +G ++  P+E TL T
Sbjct: 115 VDDAEKVFEGMAGRNLVSWNALMAAV---ADPRRGLELFRDCLEDLGGTAA-PDEATLVT 170

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--- 175
            +     L+  E G  +HG+ +KSG++  P V N ++DMY+KCG + +A   F   P   
Sbjct: 171 VLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGA 230

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ--EHGEIPDEFTFTSTLKACGSLGSVGGG 233
            +++++WN M+ GY   G +     L R+MQ  E G   DE T  S L  C  L  +   
Sbjct: 231 GRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKL 290

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            ++H F++  G  +    ++  +L+  Y +CGCL+ A RVFD I  K V SW++LI  +A
Sbjct: 291 RELHAFVVRRGL-HLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHA 349

Query: 294 QEENLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           Q    + A+ELFR++     Q  D F + S++    +   +  GK  H +  +     D+
Sbjct: 350 QNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDS 409

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            +  S++ +Y++CG    A  LF+ +  K+ V+W  +I GY ++GL  E++ LFR+M   
Sbjct: 410 FIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSK 469

Query: 413 DVE--PDGVAYLAVLSACSHSGLVEESQEYF-----SRLCNDKRMKPRIEHYSCIVDSLG 465
                P  +A  + L ACS    V   +E       + LC D  +       S I+D   
Sbjct: 470 KGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLS------SSIIDMYS 523

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           + G +D+A+   + +  K +++ W  +++   V+G
Sbjct: 524 KCGSVDDARVFFDRLKAKDAVS-WTVMITGYAVNG 557



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 188/369 (50%), Gaps = 26/369 (7%)

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++  W  L+    + G     L++  ++   S  V P+ FTL   +K+       ++G Q
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQ 84

Query: 135 IHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           +H +  K G  + +P VGNS++ MY +CGR+++A ++F+ M  ++L++WNA++A      
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAA---VA 141

Query: 194 YSDKGLLLFRKMQEH---GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              +GL LFR   E       PDE T  + L  C +L     G  +HG  + SG+  + +
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQ---KSVISWSSLILGYAQEENLAEAMELFR- 306
             ++  LVD Y KCG + +A   F        ++V+SW+ ++ GYA+      A  L R 
Sbjct: 202 --VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLRE 259

Query: 307 -QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS---VSNSIVDMY 362
            Q+ ER +  D   + S++ V +    + + +++HA+  +   GL  +   V N+++  Y
Sbjct: 260 MQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVR--RGLHLTGDMVPNALIAAY 317

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAY 421
            +CG +  A  +F+ +  K V +W  +I  + ++G A  A+ LFR+M      +PD  + 
Sbjct: 318 GRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSI 377

Query: 422 LAVLSACSH 430
            ++L AC +
Sbjct: 378 GSLLLACGN 386


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/731 (34%), Positives = 396/731 (54%), Gaps = 82/731 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H  ++K   + ++ L N+L+  YAK   +  A  VFD+M +RN+ SW  L+  +    
Sbjct: 30  KIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSY---- 85

Query: 93  NAKACLS----LFCQMGS--------------------SSVKP------------NEFTL 116
           +  ACL     +F  M +                     SVK             N   L
Sbjct: 86  SKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           ST +  +     V  G+Q+HG  +K GF+    VG+ ++DMYSK G +  A + FD MP 
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPE 205

Query: 177 KSL-------------------------------ITWNAMIAGYVLAGYSDKGLLLFRKM 205
           K++                               I+W AMIAG+   G   + + LFR+M
Sbjct: 206 KNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM 265

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +      D++TF S L ACG + ++  G Q+H ++I +   Y     +  +LVD Y KC 
Sbjct: 266 RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD--YQDNIFVGSALVDMYCKCK 323

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +  A  VF  +  K+V+SW+++++GY Q     EA+++F  ++   ++ D F L S++ 
Sbjct: 324 SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVIS 383

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
             A+ A +E+G Q H  A  + SGL +  +VSN++V +Y KCG I+++  LF+EM   + 
Sbjct: 384 SCANLASLEEGAQFHCRA--LVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDE 441

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+WT +++GY + G A E + LF  ML    +PD V ++ VLSACS +GLV++  + F  
Sbjct: 442 VSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFES 501

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +  + R+ P  +HY+C++D   RAGRL+EA+  I  MP  P    W +LLS+CR H ++E
Sbjct: 502 MIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           +G+   E LL+L+  N  +Y+++S+I+A  G W E   LRK  R KGL+K  G SW++  
Sbjct: 562 IGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYK 621

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
            ++H F   D ++P +++I+  L ++  +M +E G+V  +   LHD+ +  K + L  HS
Sbjct: 622 NQVHIFSADDQSNPFSDQIYSELEKLNYKMVQE-GYVPDMNSVLHDVDDSEKIKMLNHHS 680

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLAI   L+       PG  IRV KNLRVCGDCH   K +SKI +   +VRDA RFH F
Sbjct: 681 EKLAIAFGLIF----IPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLF 736

Query: 684 EGGVCSCGDYW 694
           + G CSCGD+W
Sbjct: 737 KDGRCSCGDFW 747



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 223/449 (49%), Gaps = 37/449 (8%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  L+  L   SK   +  G+Q+HG +VK GF   + + + L+DMY+K G +  A   FD
Sbjct: 142 RIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFD 201

Query: 72  KMLERNVV-------------------------------SWTALMCGFLQNGNAKACLSL 100
           +M E+NVV                               SWTA++ GF QNG  +  + L
Sbjct: 202 EMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDL 261

Query: 101 FCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
           F +M   +++ +++T  + + A G + +++ G Q+H   +++ ++ N  VG++++DMY K
Sbjct: 262 FREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCK 321

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           C  I  A  +F  M  K++++W AM+ GY   GYS++ + +F  MQ +G  PD+FT  S 
Sbjct: 322 CKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSV 381

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           + +C +L S+  G Q H   + SG    +   ++ +LV  Y KCG + ++ R+F  +   
Sbjct: 382 ISSCANLASLEEGAQFHCRALVSGLISFI--TVSNALVTLYGKCGSIEDSHRLFSEMSYV 439

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
             +SW++L+ GYAQ     E + LF  +     + D      ++   +   LV++G QI 
Sbjct: 440 DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499

Query: 341 AYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGL 398
               K    +      + ++D++ + G ++EA +  N+MP   + + W  +++    H  
Sbjct: 500 ESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH-- 557

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
               +G +    L  +EP   A   +LS+
Sbjct: 558 RNMEIGKWAAESLLKLEPHNTASYILLSS 586



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           K+IH +  K     +  + N++V  Y K   I  A  +F++MP +N+ +W  +++ Y K 
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
               E   +F  M   D+    V++ +++SA +  G + +S + ++
Sbjct: 89  ACLPEMERVFHAMPTRDM----VSWNSLISAYAGRGFLLQSVKAYN 130


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/587 (37%), Positives = 352/587 (59%), Gaps = 8/587 (1%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           S++P     S  +     L  ++ G  IH     S FE + V+ N I++MY+KCG + EA
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +FD MP K +++W  +I+GY  +G + + L LF KM   G  P+EFT +S LKA G+ 
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            S   G Q+H F +  G  Y +   +  SL+D Y +   + EA+ +F+ +  K+V+SW++
Sbjct: 220 PSDHHGRQLHAFSLKYG--YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNA 277

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           LI G+A++      M LF Q+  +  +   F  SS+    A    +EQGK +HA+  K  
Sbjct: 278 LIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSG 337

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
                 + N+++DMY K G I +A ++F  +  +++V+W  II+GY +HGL  EA+ LF 
Sbjct: 338 GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 397

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +ML   V+P+ + +L+VL+ACSHSGL++E Q YF  L    +++ ++ H+  +VD LGRA
Sbjct: 398 QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRA 456

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           GRL+EA   IE MP+KP+ A+W  LL +CR+H +++LG    E +  LD  +   +V++S
Sbjct: 457 GRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLS 516

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           NI+A AG  ++  ++RK+ +  G+KK    SWVE++ E+H F   DD+HP+ E+I ++  
Sbjct: 517 NIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWE 576

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           ++  ++K E+G+V    + L  + ++ +E  L+ HSEKLA+  A+    L   PG  IR+
Sbjct: 577 KISGKIK-EIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV----LKTPPGLTIRI 631

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KN+R+CGDCH   K  S++L    +VRD  RFH F  G+CSC DYW
Sbjct: 632 KKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 216/385 (56%), Gaps = 3/385 (0%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  ER   +  L  C+    L  G  +H  +    F  DL+L N +++MYAKCG +  A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FDKM  +++VSWT L+ G+ Q+G A   L+LF +M     +PNEFTLS+ +KASG  
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            S  +G Q+H   +K G++ N  VG+S++DMY++   + EA  +F+ + AK++++WNA+I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AG+   G  +  + LF +M   G  P  FT++S   AC S GS+  G  +H  +I SG  
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG- 338

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                 I  +L+D Y K G + +A++VF  + ++ ++SW+S+I GYAQ    AEA++LF 
Sbjct: 339 -QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 397

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           Q+ +  +Q +     S++   +   L+++G+       K       +   ++VD+  + G
Sbjct: 398 QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAG 457

Query: 367 LIDEATELFNEMPVK-NVVTWTVII 390
            ++EA +   EMP+K     W  ++
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALL 482


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/661 (34%), Positives = 376/661 (56%), Gaps = 7/661 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H    K+G   +  + + LID Y+ C  ++ A  VF+ ++ ++ V WTA++  + +N  
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +    +F +M  S  KPN F L++ +KA+  L SV  G  IHG  +K+  +  P VG +
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY+KCG I +A   F+++P   +I  + MI+ Y  +  +++   LF ++     +P+
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           E++ +S L+AC ++  +  G QIH   I  G  +     +  +L+DFY KC  +  + ++
Sbjct: 364 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIG--HESDLFVGNALMDFYAKCNDMDSSLKI 421

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F  +   + +SW+++++G++Q     EA+ +F +++   +       SS++   A  A +
Sbjct: 422 FSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASI 481

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
               QIH    K     DT + NS++D Y KCG I +A ++F  +  +++++W  II+GY
Sbjct: 482 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 541

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG A +A+ LF +M   +VE + + ++A+LS CS +GLV      F  +  D  +KP 
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPS 601

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+CIV  LGRAGRL++A   I  +P  PS  +W+ LLS+C +H ++ LGR   E +L
Sbjct: 602 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKIL 661

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            ++  +   YV++SN++A AGS ++   LRK  R+ G++KV G SWVE+  EIH F  G 
Sbjct: 662 EIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGS 721

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
             HP    I+ +L  +  +   E G++  +   LHD+ +E K   L VHSE+LA+   LV
Sbjct: 722 VDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLV 780

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
                  PG  IR+ KNLR C DCH     +SKI+K   +VRD  RFH FE G CSCGDY
Sbjct: 781 M----TPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDY 836

Query: 694 W 694
           W
Sbjct: 837 W 837



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 245/478 (51%), Gaps = 18/478 (3%)

Query: 31  GVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +HG +V+ G     DL   N L++MY K G +  A  +FD+M ERN+VS+  L+   
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            Q G+ +A  +LF ++     + N+F L+T +K +  + +      +H    K G + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG+ +ID YS C  +++A  +F+ +  K  + W AM++ Y      +    +F KM+  
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ F  TS LKA   L SV  G  IHG  I +      +  + G+L+D Y KCG + 
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT--LNDTEPHVGGALLDMYAKCGDIK 315

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR  F++I    VI  S +I  YAQ     +A ELF +L   S+  + + LSS++    
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           +   ++ GKQIH +A K+    D  V N+++D Y KC  +D + ++F+ +   N V+W  
Sbjct: 376 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNT 435

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS------HSGLVEESQEYFS 442
           I+ G+ + GL +EA+ +F +M    +    V Y +VL AC+      H+G +  S E  S
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK-S 494

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              ND  +       + ++D+  + G + +A  + + + ++  I  W  ++S   +HG
Sbjct: 495 TFNNDTVIG------NSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHG 545



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 218/408 (53%), Gaps = 10/408 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C  +++L  G+  HG  +K     +  +   L+DMYAKCG++  A   F+ +   +V+  
Sbjct: 275 CLPSVVLGKGI--HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           + ++  + Q+   +    LF ++  SSV PNE++LS+ ++A   +  ++ G QIH   +K
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G E +  VGN+++D Y+KC  ++ + ++F  +   + ++WN ++ G+  +G  ++ L +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +MQ       + T++S L+AC S  S+    QIH  +  S F  +  TVI  SL+D Y
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTF--NNDTVIGNSLIDTY 510

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCG + +A +VF  + ++ +ISW+++I GYA     A+A+ELF ++ + +++ +     
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
           +++ V +   LV  G  +   + ++  G+  S+ +   IV +  + G +++A +   ++P
Sbjct: 571 ALLSVCSSTGLVNHGLSLFD-SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP 629

Query: 380 -VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              + + W  +++    H     A+G F    + ++EP       +LS
Sbjct: 630 SAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLS 675



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S++     L+  L+ C+  + LD+G Q+H   +K+G   DL + N L+D YAKC +M+ +
Sbjct: 359 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 418

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + + N VSW  ++ GF Q+G  +  LS+FC+M ++ +   + T S+ ++A    
Sbjct: 419 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 478

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S+ +  QIH    KS F  + V+GNS+ID Y+KCG I +A ++F  +  + +I+WNA+I
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAII 538

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGF 245
           +GY L G +   L LF +M +     ++ TF + L  C S G V  G  +   + I  G 
Sbjct: 539 SGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGI 598

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLA 299
             S++      +V    + G L +A + + D+    S + W +L+      +N+A
Sbjct: 599 KPSMEHYTC--IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 111/215 (51%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F     L+ C + G   GG  +HG ++  G    +    A  L++ Y K G L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++++S+ +L+  +AQ  +   A  LFR+LR    +V+ FVL++M+ +      
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
                 +H+ A K+    +  V + ++D Y  C L+ +A  +FN +  K+ V WT +++ 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           Y ++   + A  +F KM +   +P+  A  +VL A
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/663 (34%), Positives = 386/663 (58%), Gaps = 8/663 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++  G + +  L+N L++ Y  CG +  A  +F     +NVVSWT L+ G  +N 
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + +F +M   + KPN  T+S+ + A   L  +     +H   ++ GFE N  V  
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMYSK G +  A ++F+ M  ++++TWNA+++GY   G+S++ + LF  M+  G + 
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +T  S + A  S+G +  GT IHGF+I +G  Y     I  +L+D YV   C+ +A R
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG--YENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFA 331
           VF  +  K V +W+ ++ G++   +   A++ F + L  ++L++D   L  ++   +   
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG 339

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            ++QG+++HA A K     +  V ++++DMY  CG +++A   F  M  K+VV W  +I 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           G G +G   +A+ LF +M    ++PD   +++VL ACSH+G+V E  + F  +     + 
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVI 459

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P ++HY+C++D LGRAG+LD A + I +MP +P   ++ TLL ACR+HG+++LG E+ + 
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           +  ++ ++   YV++SN++A AG+W   +  R   RSK +KK  G S +E+++EI+ F  
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMA 579

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           G+  HP   KI  +L  +  ++K+  G+V      L D+ ++ K++ L  HSEK+AI   
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKA-GYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFG 638

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L+R     +P  +IR+ KNLR C DCH   K +SK+   V V++DA RFH F+ GVCSC 
Sbjct: 639 LMR----TKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCR 694

Query: 692 DYW 694
           DYW
Sbjct: 695 DYW 697



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 198/403 (49%), Gaps = 7/403 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+     +H   V+ GF  ++ +   L+DMY+K G M  A  +F+ M ERNVV+W A++ 
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVS 196

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  +G ++  + LF  M    +  + +T+ + I AS  +  ++ G  IHG  +++G+E 
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEN 256

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  +  +++D+Y     +++A R+F  M  K +  W  M+ G+    + D+ +  F KM 
Sbjct: 257 DKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKML 316

Query: 207 EHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
               +  D       L +C   G++  G ++H   I + F  ++   +  +++D Y  CG
Sbjct: 317 GIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNI--FVGSAVIDMYANCG 374

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +A+R F  + +K V+ W+++I G        +A++LF Q++   L  D     S++ 
Sbjct: 375 NLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLY 434

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NV 383
             +   +V +G QI  +  K    +      + ++D+  + G +D A    N MP + + 
Sbjct: 435 ACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDF 494

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             ++ ++     HG  K    + +K+   ++EP+   Y  +LS
Sbjct: 495 DVYSTLLGACRIHGNIKLGHEISQKIF--EMEPNDAGYYVLLS 535



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 104/182 (57%), Gaps = 10/182 (5%)

Query: 337 KQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +QIHA    + SGL  +T +SNS+++ Y+ CGL+ +A ++F+  P KNVV+WT++I+G  
Sbjct: 41  QQIHAQI--ITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLA 98

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR--MKP 452
           K+    EA+ +FR+M++ + +P+ V   +VL A ++ GL+  ++   S  C   R   + 
Sbjct: 99  KNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK---SVHCFWVRGGFEG 155

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +   + +VD   + G +  A+ L ESM  + ++  W  ++S    HG  E   ++  ++
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 513 LR 514
            R
Sbjct: 215 RR 216



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 1/158 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS +  L  G ++H   +K  F+ ++ + + +IDMYA CG +  A   F  M E++V
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V W A++ G   NG     + LF QM  S + P+E T  + + A      V  G+QI + 
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           M   S    N      +ID+  + G+++ A    + MP
Sbjct: 452 MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/623 (37%), Positives = 363/623 (58%), Gaps = 8/623 (1%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M +RN+VSWTA++ G  QN      +  FC M      P +F  S+ I+A   L S+E G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+H + +K G      VG+++ DMYSKCG + +A ++F+ MP K  ++W AMI GY   
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G  ++ LL F+KM +     D+    STL ACG+L +   G  +H  ++  GF   +   
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI--F 178

Query: 253 IAGSLVDFYVKCGCLVEARRVFDL-IEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +  +L D Y K G +  A  VF +  E ++V+S++ LI GY + E + + + +F +LR +
Sbjct: 179 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ + F  SS++   A+ A +EQG Q+HA   K+    D  VS+ +VDMY KCGL+++A
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F+E+     + W  +++ +G+HGL K+A+ +F +M+   V+P+ + ++++L+ CSH+
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVEE  +YF  +     + P  EHYSC++D LGRAGRL EAK  I  MP +P+   W +
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
            L ACR+HGD E+G+   E L++L+  N    V++SNI+A+   W +   +R   R   +
Sbjct: 419 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 478

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK+ G SWV+V  + H F   D +HP    I++ L  +  ++K   G+V        D+ 
Sbjct: 479 KKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAA-GYVPRTDSVPLDMD 537

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +  KE+ L  HSE++A+  AL+   +    GK I V KNLRVC DCH  IK +SK+    
Sbjct: 538 DSMKEKLLHRHSERIAVAFALISMPI----GKPIIVKKNLRVCVDCHSAIKFISKVTGRK 593

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRD +RFH F  G CSCGDYW
Sbjct: 594 IIVRDNSRFHHFTDGSCSCGDYW 616



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 219/416 (52%), Gaps = 9/416 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            + ++R C+    ++ G Q+H   +K G   +L + ++L DMY+KCG M  AC VF++M 
Sbjct: 44  FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VSWTA++ G+ + G  +  L  F +M    V  ++  L + + A G L + + G  
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 163

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV-MPAKSLITWNAMIAGYVLAG 193
           +H   +K GFE +  VGN++ DMYSK G +  A+ +F +    ++++++  +I GYV   
Sbjct: 164 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 223

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             +KGL +F +++  G  P+EFTF+S +KAC +  ++  GTQ+H  ++   F       +
Sbjct: 224 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF--DEDPFV 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           +  LVD Y KCG L +A + FD I   + I+W+SL+  + Q     +A+++F ++ +R +
Sbjct: 282 SSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGV 341

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
           + +     S++   +   LVE+G   + Y+     G+     +   ++D+  + G + EA
Sbjct: 342 KPNAITFISLLTGCSHAGLVEEGLD-YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEA 400

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            E  N MP + N   W   +     HG   + +G      L  +EP     L +LS
Sbjct: 401 KEFINRMPFEPNAFGWCSFLGACRIHG--DKEMGKLAAEKLVKLEPKNSGALVLLS 454


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/679 (35%), Positives = 375/679 (55%), Gaps = 51/679 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C ++  L    ++H   +K   + D  + + L  +Y  C ++  A  +FD++   +V
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           + W  ++  +  NG     + L+  M    V+PN++T    +KA   L ++E+G++IH  
Sbjct: 75  ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
               G E +  V  +++D Y+KCG + EA R+F  M  + ++ WNAMIAG  L G  D  
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L  +MQE G  P+  T    L  C                                  
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTCQ--------------------------------- 221

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
                  CL+ AR++FD++  ++ +SWS++I GY   + + EA+++FR ++   +  D  
Sbjct: 222 -------CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPD-- 272

Query: 319 VLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
            L++M+GV    +  A ++ G   H Y        DT + N+++DMY KCG I  A E+F
Sbjct: 273 -LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 331

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           N M   ++V+W  +I GYG HGL  EA+GLF  +L   ++PD + ++ +LS+CSHSGLV 
Sbjct: 332 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 391

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E + +F  +  D  + PR+EH  C+VD LGRAG +DEA + I +MP +P + IW  LLSA
Sbjct: 392 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 451

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+H ++ELG EV + +  L  ++  N+V++SNI++ AG W++   +R   +  GLKK+ 
Sbjct: 452 CRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIP 511

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+E++  +H F GGD +H    +I++ L E+   MK  LG+     +   D++EE K
Sbjct: 512 GCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMK-RLGYQAECSFVFQDVEEEEK 570

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E+ L  HSEKLAI      G LN + G+ I V KNLRVCGDCH  IK ++ I K    VR
Sbjct: 571 EQILLYHSEKLAIAF----GILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVR 626

Query: 676 DATRFHRFEGGVCSCGDYW 694
           DA RFH F+ G C+CGD+W
Sbjct: 627 DANRFHHFKNGTCNCGDFW 645


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/688 (35%), Positives = 382/688 (55%), Gaps = 27/688 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS  L L     +H    + G   DL ++  L+D+YAKC     A  VF +M  R+V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 79  VSWTALMCGFLQNG---NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           V+W A++ G+  +G   +  ACL L          PN  TL   +       ++  G  +
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLM----QDDHAPNASTLVALLPLLAQHGALSQGRAV 251

Query: 136 HGM----CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           H      C     +   +VG +++DMY+KCG +  A+R+F+ M  ++ +TW+A++ G+VL
Sbjct: 252 HAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVL 311

Query: 192 AGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            G   +   LF+ M   G       +  S L+AC +L  +  G Q+H  L  SG      
Sbjct: 312 CGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGL--HTD 369

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
                SL+  Y K G + +A  +FD +  K  +S+S+L+ GY Q     EA  +FR+++ 
Sbjct: 370 LTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQA 429

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
            ++Q D   + S++   +  A ++ GK  H          +TS+ N+++DMY KCG ID 
Sbjct: 430 CNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDL 489

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + ++F+ MP +++V+W  +I GYG HGL KEA  LF  M     EPD V ++ ++SACSH
Sbjct: 490 SRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSH 549

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           SGLV E + +F  + +   + PR+EHY  +VD L R G LDEA   I+ MP+K  + +W 
Sbjct: 550 SGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWG 609

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
            LL ACRVH +++LG++V  ++ +L  +   N+V++SNI + AG ++E   +R + + +G
Sbjct: 610 ALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQG 669

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ----VLMEMEKRMKEELGFVYGVKYA 606
            KK  G SW+E++  +H F GGD +H  + +I+Q    +L+++ K     LG+     + 
Sbjct: 670 FKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINK-----LGYRADTSFV 724

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           L D++EE KE++L  HSEKLAI      G L     K I V KNLRVCGDCH  IK ++ 
Sbjct: 725 LQDVEEEEKEKALLYHSEKLAIAF----GVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTL 780

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           + K   +VRDA RFH F+ G CSCGD+W
Sbjct: 781 VRKRAIIVRDANRFHHFKNGQCSCGDFW 808



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 240/465 (51%), Gaps = 21/465 (4%)

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CG+++ A  +FD++    +  + AL+  +   G A A             +PN +T    
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +KA   L  + +   +H    ++G   +  V  +++D+Y+KC     AA +F  MPA+ +
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 180 ITWNAMIAGYVLAG-YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           + WNAM+AGY L G YSD    L     +H   P+  T  + L      G++  G  +H 
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA--PNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 239 FLITSGFPYSVK--TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           + + +   +  K   ++  +L+D Y KCG LV A RVF+ +  ++ ++WS+L+ G+    
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 297 NLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            + EA  LF+ +  + L  +    ++S +   A+ + +  GKQ+HA  AK     D +  
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           NS++ MY K GLID+AT LF++M VK+ V+++ +++GY ++G A EA  +FRKM   +V+
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR---IEHYSC--IVDSLGRAGRL 470
           PD    ++++ ACSH   ++  +      C    +  R    E   C  ++D   + GR+
Sbjct: 434 PDVATMVSLIPACSHLAALQHGK------CGHGSVIVRGIASETSICNALIDMYAKCGRI 487

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           D ++ + + MP +  I  W T+++   +HG   LG+E   + L +
Sbjct: 488 DLSRQIFDVMPAR-DIVSWNTMIAGYGIHG---LGKEATALFLDM 528



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 153/281 (54%), Gaps = 12/281 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A +LR C+    L  G QLH  L K G   DL   N L+ MYAK G ++ A  +FD+M+
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++AL+ G++QNG A     +F +M + +V+P+  T+ + I A   L+++++G  
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKC 457

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  G      + N++IDMY+KCGRI+ + ++FDVMPA+ +++WN MIAGY + G 
Sbjct: 458 GHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-----IHGFLITSGFPYSV 249
             +   LF  M+     PD+ TF   + AC   G V  G +      H + IT    + +
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI 577

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLI 289
                  +VD   + G L EA +    +  K+ V  W +L+
Sbjct: 578 ------GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 354/587 (60%), Gaps = 9/587 (1%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           S++P     S  +     L  ++ G  IH     S FE + V+ N I++MY+KCG + EA
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +FD MP K +++W  +I+GY  +G + + L LF KM   G  P+EFT +S LKA G+ 
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            S   G Q+H F +  G  Y +   +  SL+D Y +   + EA+ +F+ +  K+V+SW++
Sbjct: 220 PSDHHGRQLHAFSLKYG--YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNA 277

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           LI G+A++      M LF Q+  +  +   F  SS++   +  +L EQGK +HA+  K  
Sbjct: 278 LIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSL-EQGKWVHAHVIKSG 336

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
                 + N+++DMY K G I +A ++F  +  +++V+W  II+GY +HGL  EA+ LF 
Sbjct: 337 GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 396

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +ML   V+P+ + +L+VL+ACSHSGL++E Q YF  L    +++ ++ H+  +VD LGRA
Sbjct: 397 QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRA 455

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           GRL+EA   IE MP+KP+ A+W  LL ACR+H +++LG    E +  LD  +   +V++S
Sbjct: 456 GRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLS 515

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           NI+A AG  ++  ++RK+ +  G+KK    SWVE++ E+H F   DD+HP+ E+I ++  
Sbjct: 516 NIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWE 575

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           ++  ++K E+G+V    + L  + ++ +E  L+ HSEKLA+  A+    L   PG  IR+
Sbjct: 576 KISGKIK-EIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV----LKTPPGLTIRI 630

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KN+R+CGDCH   K  S++L    +VRD  RFH F  G+CSC DYW
Sbjct: 631 KKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/385 (34%), Positives = 217/385 (56%), Gaps = 4/385 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  ER   +  L  C+    L  G  +H  +    F  DL+L N +++MYAKCG +  A
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FDKM  +++VSWT L+ G+ Q+G A   L+LF +M     +PNEFTLS+ +KASG  
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            S  +G Q+H   +K G++ N  VG+S++DMY++   + EA  +F+ + AK++++WNA+I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AG+   G  +  + LF +M   G  P  FT++S L AC S GS+  G  +H  +I SG  
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG- 337

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                 I  +L+D Y K G + +A++VF  + ++ ++SW+S+I GYAQ    AEA++LF 
Sbjct: 338 -QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 396

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           Q+ +  +Q +     S++   +   L+++G+       K       +   ++VD+  + G
Sbjct: 397 QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAG 456

Query: 367 LIDEATELFNEMPVK-NVVTWTVII 390
            ++EA +   EMP+K     W  ++
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALL 481


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/699 (34%), Positives = 393/699 (56%), Gaps = 51/699 (7%)

Query: 6   FSLVSERQRLADSLRCCSKNL---LLDYGV------QLHGA-LVKMGFSFDLMLNNDLID 55
           FSL +++ +L+      +++L   +LD         +LH   L+      +  L   L+ 
Sbjct: 20  FSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMR 79

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
            YA CGE      +FD++ ++NVV +  ++  ++ NG  +  L +F  M +    P+ +T
Sbjct: 80  AYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYT 139

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               +KA  V  ++  G+QIHG  +K G + N  +GN ++ MY KC  ++ A R+ D MP
Sbjct: 140 YPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMP 199

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            + +++WN+M+AGY   G  +  L L R+M++    PD  T  S L A  +         
Sbjct: 200 GRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN--------- 250

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
                                       C  ++  + +F  +++KS+ISW+ +I  Y   
Sbjct: 251 --------------------------TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNN 284

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               EA++L+ Q++   ++ D   +SS++    D +    G++IH Y  +     +  + 
Sbjct: 285 AMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLE 344

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+++DMY KCG + EA  +F++M  ++VV+WT +I+ YG  G  K+AV LF+KM      
Sbjct: 345 NALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFT 404

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           PD +A+++VL+ACSH+GLV+E +  F+ L  +  + P IEHY+C+VD LGRAG++DEA +
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEGRYCFN-LMAEYGITPGIEHYNCMVDLLGRAGKIDEAYH 463

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
           L   MP++P+  +W +LLSACRV+  + +     + L +L  +    YV++SNI+A AG 
Sbjct: 464 LTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGR 523

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           W + E +R +  SKG+KK+ G S VE++  ++ F  GD +H  +++I++ L  +  RMK 
Sbjct: 524 WQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMK- 582

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
           ELG++     ALHD++EE KE  L VHSEKLAI  A+    LN +PG  IR+ KN+RVCG
Sbjct: 583 ELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAI----LNTKPGSTIRITKNIRVCG 638

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH   K +SKI +   ++RD  RFH F  GVCSCGDYW
Sbjct: 639 DCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/669 (36%), Positives = 401/669 (59%), Gaps = 18/669 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q+H  +VK G    + ++N LI++Y KCG +  A  +FDK   ++VV+W +++ G+  
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG     L +F  M  + V+ +E + ++ IK    L  +    Q+H   +K GF ++  +
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336

Query: 151 GNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             +++  YSKC  + +A R+F +     ++++W AMI+G++     ++ + LF +M+  G
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+EFT++  L A      V   +++H  ++ + +  S  + +  +L+D YVK G + E
Sbjct: 397 VRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERS--STVGTALLDAYVKLGKVDE 450

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV-FA 328
           A +VF  I+ K +++WS+++ GYAQ      A+++F +L +  ++ + F  SS++ V  A
Sbjct: 451 AAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAA 510

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A + QGKQ H +A K  S LD+S  VS++++ MY K G I+ A E+F     K++V+W
Sbjct: 511 TTASMGQGKQFHGFAIK--SRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSW 568

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+GY +HG A +A+ +F++M    V+ D V ++ V +AC+H+GLVEE ++YF  +  
Sbjct: 569 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVR 628

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           D ++ P  EH SC+VD   RAG+L++A  +I++MP      IW+T+L+ACRVH   ELGR
Sbjct: 629 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGR 688

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              E ++ +  ++   YV++SN++A++G W E  ++RKL   + +KK  G SW+EV  + 
Sbjct: 689 LAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 748

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
           + F  GD +HPL ++I+  L ++  R+K +LG+     Y L DI +E KE  L  HSE+L
Sbjct: 749 YAFLAGDRSHPLKDQIYMKLEDLSTRLK-DLGYEPDTSYVLQDIDDEHKEAVLAQHSERL 807

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG- 685
           AI   L+        G  + + KNLRVCGDCH  IK ++KI +   VVRD+ RFH F   
Sbjct: 808 AIAFGLIA----TPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSD 863

Query: 686 GVCSCGDYW 694
           GVCSCGD+W
Sbjct: 864 GVCSCGDFW 872



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 258/495 (52%), Gaps = 18/495 (3%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G QLH   +K GF  D+ +   L+D Y K         VFD+M ERNVV+WT L+ G+ 
Sbjct: 115 FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYA 174

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV---ENGMQIHGMCMKSGFEW 146
           +N   +  L+LF +M     +PN FT +    A GVL+       G+Q+H + +K+G + 
Sbjct: 175 RNSLNEEVLTLFMRMQDEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDK 231

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              V NS+I++Y KCG + +A  +FD    KS++TWN+MI+GY   G   + L +F  M+
Sbjct: 232 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 291

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            +     E +F S +K C +L  +    Q+H  ++  GF +     I  +L+  Y KC  
Sbjct: 292 LNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN--IRTALMVAYSKCMA 349

Query: 267 LVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           +++A R+F       +V+SW+++I G+ Q +   EA+ LF +++ + ++ + F  S ++ 
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILT 409

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                  V    ++HA   K      ++V  +++D Y+K G +DEA ++F+ +  K++V 
Sbjct: 410 ALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVA 465

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+ ++ GY + G  + A+ +F ++    V+P+   + ++L+ C+ +       + F    
Sbjct: 466 WSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFA 525

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD---- 501
              R+   +   S ++    + G ++ A+ + +    K  ++ W +++S    HG     
Sbjct: 526 IKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS-WNSMISGYAQHGQAMKA 584

Query: 502 LELGREVGEILLRLD 516
           L++ +E+ +  +++D
Sbjct: 585 LDVFKEMKKRKVKMD 599



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 238/442 (53%), Gaps = 14/442 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
            A  ++ C+    L +  QLH ++VK GF FD  +   L+  Y+KC  M  A  +F +  
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
              NVVSWTA++ GFLQN   +  + LF +M    V+PNEFT S  + A  V+S  E   
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE--- 418

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +H   +K+ +E +  VG +++D Y K G+++EAA++F  +  K ++ W+AM+AGY  AG
Sbjct: 419 -VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            ++  + +F ++ + G  P+EFTF+S L  C  +  S+G G Q HGF I S    S+   
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSL--C 535

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           ++ +L+  Y K G +  A  VF    +K ++SW+S+I GYAQ     +A+++F+++++R 
Sbjct: 536 VSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 595

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IVDMYLKCGLIDEA 371
           +++D      +        LVE+G++      +      T   NS +VD+Y + G +++A
Sbjct: 596 VKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 655

Query: 372 TELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVG-LFRKMLLDDVEPDGVAYLAVLSACS 429
            ++ + MP +     W  I+     H   K  +G L  + ++  +  D  AY+ + +  +
Sbjct: 656 MKVIDNMPNLAGSTIWRTILAACRVH--KKTELGRLAAEKIIAMIPEDSAAYVLLSNMYA 713

Query: 430 HSGLVEESQEYFSRLCNDKRMK 451
            SG  +E  +   +L N++ +K
Sbjct: 714 ESGDWQERAK-VRKLMNERNVK 734



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 229/443 (51%), Gaps = 23/443 (5%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FDK  +R+  S+T+L+ GF ++G  +    LF  +    ++ +    S+ +K S  L  
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G Q+H  C+K GF  +  VG S++D Y K     +   +FD M  ++++TW  +I+G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y     +++ L LF +MQ+ G  P+ FTF + L      G  G G Q+H  ++ +G   +
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   ++ SL++ Y+KCG + +AR +FD  E KSV++W+S+I GYA      EA+ +F  +
Sbjct: 233 IP--VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 290

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R   +++     +S++ + A+   +   +Q+H    K     D ++  +++  Y KC  +
Sbjct: 291 RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAM 350

Query: 369 DEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            +A  LF E   + NVV+WT +I+G+ ++   +EAVGLF +M    V P+   Y  +L+A
Sbjct: 351 LDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410

Query: 428 CS-------HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
                    H+ +V+ + E  S +             + ++D+  + G++DEA  +   +
Sbjct: 411 LPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYVKLGKVDEAAKVFSGI 458

Query: 481 PVKPSIAIWQTLLSACRVHGDLE 503
             K  +A W  +L+     G+ E
Sbjct: 459 DNKDIVA-WSAMLAGYAQAGETE 480



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 152/270 (56%), Gaps = 6/270 (2%)

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           R+  A  +FD  P +   ++ +++ G+   G + +   LF  +Q  G   D   F+S LK
Sbjct: 46  RLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLK 105

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
              +L     G Q+H   I  GF   V   +  SLVD Y+K     + R VFD +++++V
Sbjct: 106 VSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ++W++LI GYA+     E + LF ++++   Q + F  ++ +GV A+  +  +G Q+H  
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223

Query: 343 AAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
             K  +GLD +  VSNS++++YLKCG + +A  LF++  VK+VVTW  +I+GY  +GL  
Sbjct: 224 VVK--NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 281

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           EA+G+F  M L+ V     ++ +++  C++
Sbjct: 282 EALGMFYSMRLNHVRLSESSFASIIKLCAN 311



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 120/238 (50%), Gaps = 3/238 (1%)

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A  +FD    +   S++SL+ G++++    EA  LF  ++   +++D  + SS++ V
Sbjct: 47  LYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKV 106

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A       G+Q+H    K     D SV  S+VD Y+K     +   +F+EM  +NVVTW
Sbjct: 107 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTW 166

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           T +I+GY ++ L +E + LF +M  +  +P+   + A L   +  G+     +  + +  
Sbjct: 167 TTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 226

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-DLE 503
           +  +   I   + +++   + G + +A+ L +   VK S+  W +++S    +G DLE
Sbjct: 227 NG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLE 282


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/630 (36%), Positives = 371/630 (58%), Gaps = 29/630 (4%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FDK+ +R+V+SW +++ G++ NG  +  L ++ QM    +  +  T+ + +     
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++  G  +H + +KS FE      N+++DMYSKCG ++ A R+F+ M  +++++W +M
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAGY   G+SD  ++L ++M++ G   D    TS L AC   GS+  G  +H ++  +  
Sbjct: 324 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +L+D Y KCG +  A  VF  +  K +ISW++++                
Sbjct: 384 ASNL--FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------- 425

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  L+ D   ++ ++   A  + +E+GK+IH Y  +     D  V+N++VD+Y+KC
Sbjct: 426 -----GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G++  A  LF+ +P K++V+WTV+I GYG HG   EA+  F +M    +EPD V+++++L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSHSGL+E+   +F  + ND  ++P++EHY+C+VD L R G L +A   IE++P+ P 
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 600

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW  LL  CR++ D+EL  +V E +  L+ +N   YV+++NI+A+A    E +R+R+ 
Sbjct: 601 ATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREK 660

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
              KGL+K  G SW+E+   ++ F  G++ +HP ++KI  +L +M ++MKEE G+    K
Sbjct: 661 IGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEE-GYFPKTK 719

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           YAL +  E  KE +L  HSEKLA+   L    L   P K IRV KNLRVCGDCHE  K +
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGL----LTLPPRKTIRVTKNLRVCGDCHEMAKFM 775

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK  +   V+RD+ RFH F+ G CSC  +W
Sbjct: 776 SKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 31/409 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ +  L  G  +H   +K  F   +  +N L+DMY+KCG+++GA  VF+KM ERNVVSW
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ ++G +   + L  QM    VK +   +++ + A     S++NG  +H     
Sbjct: 321 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +    N  V N+++DMY+KCG +  A  +F  M  K +I+WN M+               
Sbjct: 381 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------------- 425

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
                  GE+ PD  T    L AC SL ++  G +IHG+++ +G  YS    +A +LVD 
Sbjct: 426 -------GELKPDSRTMACILPACASLSALERGKEIHGYILRNG--YSSDRHVANALVDL 476

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           YVKCG L  AR +FD+I  K ++SW+ +I GY       EA+  F ++R+  ++ D    
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++   +   L+EQG +   Y  K    ++  + +   +VD+  + G + +A +    +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 595

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P+  +   W  ++ G   +   + A  +  ++   ++EP+   Y  +L+
Sbjct: 596 PIAPDATIWGALLCGCRIYHDIELAEKVAERVF--ELEPENTGYYVLLA 642



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 218/490 (44%), Gaps = 75/490 (15%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           E +     L+ C+    L  G ++H  +       D  L   L+  YA CG++     VF
Sbjct: 98  ETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVF 157

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D M ++NV  W  ++  + + G+ K  + LF  M                        VE
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM------------------------VE 193

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G++                            R   A+ +FD +  + +I+WN+MI+GYV
Sbjct: 194 KGIE--------------------------GKRPESASELFDKLCDRDVISWNSMISGYV 227

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G +++GL ++++M   G   D  T  S L  C + G++  G  +H   I S F   + 
Sbjct: 228 SNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRIN 287

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              + +L+D Y KCG L  A RVF+ + +++V+SW+S+I GY ++     A+ L +Q+ +
Sbjct: 288 --FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK 345

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +++D   ++S++   A    ++ GK +H Y        +  V N+++DMY KCG ++ 
Sbjct: 346 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEG 405

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+ M VK++++W  ++                      +++PD      +L AC+ 
Sbjct: 406 ANSVFSTMVVKDIISWNTMV---------------------GELKPDSRTMACILPACAS 444

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              +E  +E    +  +     R    + +VD   + G L  A+ L + +P K  ++ W 
Sbjct: 445 LSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSKDLVS-WT 502

Query: 491 TLLSACRVHG 500
            +++   +HG
Sbjct: 503 VMIAGYGMHG 512



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 27/299 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  LD G  +H  +     + +L + N L+DMYAKCG M GA +VF  M+ +++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  ++                       +KP+  T++  + A   LS++E G +IHG 
Sbjct: 419 ISWNTMV---------------------GELKPDSRTMACILPACASLSALERGKEIHGY 457

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V N+++D+Y KCG +  A  +FD++P+K L++W  MIAGY + GY ++ 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M++ G  PDE +F S L AC   G +  G +   +++ + F    K      +V
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMV 576

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D   + G L +A +  + +        W +L+ G      +   +EL  ++ ER  +++
Sbjct: 577 DLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC----RIYHDIELAEKVAERVFELE 631



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 99/184 (53%), Gaps = 4/184 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  + + +A  L  C+    L+ G ++HG +++ G+S D  + N L+D+Y KCG +  A 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD +  +++VSWT ++ G+  +G     ++ F +M  + ++P+E +  + + A     
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
            +E G +   + MK+ F   P + +   ++D+ S+ G +++A +  + +P A     W A
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606

Query: 185 MIAG 188
           ++ G
Sbjct: 607 LLCG 610


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/672 (36%), Positives = 376/672 (55%), Gaps = 11/672 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD   +LH  +       +  L N L+D Y+K G ++GA   F ++   N  SW  LM  
Sbjct: 48  LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAA 107

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + QNG+ +   +LF  M S  V+PN  TLST + A     ++  G +++ +      E +
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V +S+I MY +C  I EA R FD  P K ++ W AMI+ Y     + + L L R+M  
Sbjct: 168 SHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDL 227

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G      T+ S L AC S   +  G   H      G   S  TV+AG+LV+ Y KCG +
Sbjct: 228 EGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRS-STVVAGTLVNLYGKCGRV 286

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +ARRV D +  ++ +SW+++I  YAQ  N AEA+ LF+ +     +     L S++   
Sbjct: 287 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 346

Query: 328 ADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVV 384
           A    +  GK+IHA     PS      + N+++ MY KCG ++ A E+F  +P+  ++VV
Sbjct: 347 AVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVV 406

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           TWT +I  Y ++G+ +EA+ LF++ML+D   EP+ V +L+VL ACSH G +E++ E+F  
Sbjct: 407 TWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCS 466

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEA-KNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           +  D  + P  +HY C+VD LGRAGRL EA K L+     +  +  W   LSAC+++GDL
Sbjct: 467 MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 526

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           E  +   + +  L+ +N    V++SN++A  G   +  R+R   +S G+KK AGRSW+E+
Sbjct: 527 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 586

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
           +  +H F   D +HP   +I+  L  + + +KE  G+V   K  L D+ EE K + L  H
Sbjct: 587 NNRVHEFMVSDVSHPRKLEIYSELERLHREIKEA-GYVPDTKMVLRDVDEEKKVQLLGYH 645

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SE+LA+ L ++    +  PG  +RV KNLRVC DCH   K +S+I+    +VRD +RFH 
Sbjct: 646 SERLAMALGII----STPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHH 701

Query: 683 FEGGVCSCGDYW 694
           F+ GVCSCGDYW
Sbjct: 702 FKDGVCSCGDYW 713



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 205/436 (47%), Gaps = 41/436 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L  C+    L  G +L+  +       D  + + LI MY +C E+  A   FD+  
Sbjct: 136 LSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSP 195

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E++VV WTA++  +  N      L L  +M    +K    T  + + A      + NG+ 
Sbjct: 196 EKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVA 255

Query: 135 IHGMCMKSGFEW-NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            H      G +  + VV  +++++Y KCGR+++A R+ D MP ++ ++W AMIA Y   G
Sbjct: 256 FHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNG 315

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            + + + LF+ M   G  P + T  S + +C  LG++  G +IH   I S   +S   ++
Sbjct: 316 NAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA-RIRSSPSFSQSLML 374

Query: 254 AGSLVDFYVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
             +++  Y KCG L  AR VF+ +    +SV++W+++I  YAQ     EA+ELF++    
Sbjct: 375 LNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQE---- 430

Query: 312 SLQVDGFVLSSMMGVFADF-ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
            + +DG    + +   +   A    G+   A+      G D  V  +  D Y  C L+D 
Sbjct: 431 -MLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPA-GDHY--CCLVD- 485

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL--DDVEPDGVAYLAVLSAC 428
                             ++   G+ G A+       K+LL   D E D V ++A LSAC
Sbjct: 486 ------------------LLGRAGRLGEAE-------KLLLRHKDFEADVVCWIAFLSAC 520

Query: 429 SHSGLVEESQEYFSRL 444
             +G +E SQ    R+
Sbjct: 521 QMNGDLERSQRAAKRV 536


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 240/655 (36%), Positives = 370/655 (56%), Gaps = 13/655 (1%)

Query: 45  FDLMLNNDLIDMYAKCG----EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
           F L  +N L++M  +C     + N    +F ++ + N+  W  ++ G + N      +  
Sbjct: 40  FGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEF 99

Query: 101 FCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
           +  M S    PN FT    +KA   L  ++ G++IH + +K GF+ +  V  S++ +Y+K
Sbjct: 100 YGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAK 159

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           CG + +A ++FD +P K++++W A+I+GY+  G   + + +FR++ E    PD FT    
Sbjct: 160 CGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRV 219

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQ 279
           L AC  LG +  G  IH  ++  G    V+ V  G SLVD Y KCG + +AR VFD + +
Sbjct: 220 LSACTQLGDLNSGEWIHKCIMEMGM---VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPE 276

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
           K ++SW ++I GYA      EA++LF Q++  +++ D + +  ++   A    +E G+ +
Sbjct: 277 KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWV 336

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
                +     +  +  +++D+Y KCG +  A E+F  M  K+ V W  II+G   +G  
Sbjct: 337 SGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYV 396

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           K + GLF ++    ++PDG  ++ +L  C+H+GLV+E + YF+ +     + P IEHY C
Sbjct: 397 KISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGC 456

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           +VD LGRAG LDEA  LI +MP++ +  +W  LL ACR+H D +L     + L+ L+  N
Sbjct: 457 MVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWN 516

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
             NYV++SNI++    W+E  ++R     K ++K  G SW+EVD  +H F  GD  HPL+
Sbjct: 517 SGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLS 576

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           EKI+  L E+ K+MK   G+V    + L DI+EE KE  L  HSEKLAI   L+    + 
Sbjct: 577 EKIYAKLDELTKKMKVA-GYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLI----SA 631

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            P  VIRV KNLRVCGDCH  IK +S I      VRD  RFH F  G CSC DYW
Sbjct: 632 TPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 229/438 (52%), Gaps = 12/438 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++ L L  GV++H  +VK GF  D+ +   L+ +YAKCG +  A  VFD + ++NV
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNV 178

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G++  G  +  + +F ++   ++ P+ FT+   + A   L  + +G  IH  
Sbjct: 179 VSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKC 238

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M+ G   N  VG S++DMY+KCG + +A  +FD MP K +++W AMI GY L G   + 
Sbjct: 239 IMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEA 298

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF +MQ     PD +T    L AC  LG++  G  + G +  + F Y+   V+  +L+
Sbjct: 299 IDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN--PVLGTALI 356

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A  VF  +++K  + W+++I G A    +  +  LF Q+ +  ++ DG 
Sbjct: 357 DLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGN 416

Query: 319 VLSSMMGVFADFALVEQGKQ----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
               ++       LV++G++    ++ + +  PS         +VD+  + GL+DEA +L
Sbjct: 417 TFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPS---IEHYGCMVDLLGRAGLLDEAHQL 473

Query: 375 FNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
              MP++ N + W  ++     H   + A    ++++  ++EP       +LS    + L
Sbjct: 474 IRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLI--ELEPWNSGNYVLLSNIYSANL 531

Query: 434 VEESQEYFSRLCNDKRMK 451
             +         N+KR++
Sbjct: 532 KWDEAAKVRLSMNEKRIQ 549


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/678 (34%), Positives = 393/678 (57%), Gaps = 8/678 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C+  L  + G+++  A V+ GF   L + + +++   K G +  A  VFD M E++
Sbjct: 151 ALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKD 210

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VV W +++ G++Q G     + +F +M    ++P+  T++  +KA G     + GM  H 
Sbjct: 211 VVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHS 270

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +  G   +  V  S++DMYS  G    AA +FD M ++SLI+WNAMI+GYV  G   +
Sbjct: 271 YVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPE 330

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
              LFR++ + G   D  T  S ++ C     +  G  +H  +I       +  V++ ++
Sbjct: 331 SYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHL--VLSTAI 388

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y KCG + +A  VF  + +K+VI+W+++++G +Q     +A++LF Q++E  +  + 
Sbjct: 389 VDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANS 448

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN- 376
             L S++   A    + +G+ +HA+  +     D  ++++++DMY KCG I  A +LFN 
Sbjct: 449 VTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN 508

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           E  +K+V+    +I GYG HG  + A+G++ +M+ + ++P+   ++++L+ACSHSGLVEE
Sbjct: 509 EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEE 568

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            +  F  +  D  ++P+ +HY+C+VD   RAGRL+EA  L++ MP +PS  + + LLS C
Sbjct: 569 GKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGC 628

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R H +  +G ++ + L+ LD  N   YVM+SNI+A+A  W     +R L R +G+KK+ G
Sbjct: 629 RTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPG 688

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S +EV  +++ F+  DD+HP    I+Q+L  +   ++ E G++      L D+ E  K 
Sbjct: 689 YSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAE-GYIPDTSCVLRDVNEPMKV 747

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           + L  HSE+LAI   L    L+   G +I++ KNLRVC DCH   K +SKI++   +VRD
Sbjct: 748 KLLWGHSERLAIAFGL----LSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRD 803

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH F  G CSC D+W
Sbjct: 804 ANRFHHFVNGKCSCNDFW 821



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 257/548 (46%), Gaps = 40/548 (7%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++K   S +  L   LI +Y+  G +  A  VFD+          A++ GFL+N  
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                 LF  MGS  ++ N +T    +KA   L   E GM+I    ++ GF  +  VG+S
Sbjct: 126 HMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSS 185

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +++   K G + +A ++FD MP K ++ WN++I GYV  G   + + +F +M   G  P 
Sbjct: 186 MVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPS 245

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  + LKACG  G    G   H +++  G    V   +  SLVD Y   G    A  V
Sbjct: 246 PVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV--FVLTSLVDMYSNLGDTGSAALV 303

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           FD +  +S+ISW+++I GY Q   + E+  LFR+L +     D   L S++   +  + +
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           E G+ +H+   +        +S +IVDMY KCG I +AT +F  M  KNV+TWT ++ G 
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGL 423

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            ++G A++A+ LF +M  + V  + V  ++++  C+H G + + +   +           
Sbjct: 424 SQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDA 483

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLI------------ESM--------------------- 480
           +   S ++D   + G++  A+ L              SM                     
Sbjct: 484 VI-TSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMI 542

Query: 481 --PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV--NYVMMSNIHADAGSW 536
              +KP+   + +LL+AC   G +E G+ +   + R     P   +Y  + ++H+ AG  
Sbjct: 543 EERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRL 602

Query: 537 NECERLRK 544
            E + L K
Sbjct: 603 EEADELVK 610



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 267/575 (46%), Gaps = 31/575 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A+ L+ C ++ L   G+  H  ++ +G   D+ +   L+DMY+  G+   A  VFD M 
Sbjct: 249 MANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMC 308

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+++SW A++ G++QNG      +LF ++  S    +  TL + I+     S +ENG  
Sbjct: 309 SRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRI 368

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++   E + V+  +I+DMYSKCG I +A  +F  M  K++ITW AM+ G    GY
Sbjct: 369 LHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGY 428

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  L LF +MQE     +  T  S +  C  LGS+  G  +H   I  G  Y+   VI 
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHG--YAFDAVIT 486

Query: 255 GSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            +L+D Y KCG +  A ++F +    K VI  +S+I+GY    +   A+ ++ ++ E  L
Sbjct: 487 SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERL 546

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           + +     S++   +   LVE+GK + H+                +VD++ + G ++EA 
Sbjct: 547 KPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEAD 606

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
           EL  +MP + +      +++G   H      + +  +++  D    G+    +LS     
Sbjct: 607 ELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGI--YVMLSNIYAE 664

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
               ES  Y   L   + MK +I  YS I   +G     ++      S    PS A    
Sbjct: 665 ARKWESVNYIRGLMRMQGMK-KIPGYSLI--EVG-----NKVYTFFASDDSHPSWADIYQ 716

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL   R+  + E        +LR D + P+   ++         W   ER   LA + GL
Sbjct: 717 LLENLRLEVEAEGYIPDTSCVLR-DVNEPMKVKLL---------WGHSER---LAIAFGL 763

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
                 S +++ K +       D H +T+ I +++
Sbjct: 764 LSTPCGSLIKITKNLRVCV---DCHNVTKYISKIV 795



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 4/175 (2%)

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           V SS++  F++  +    K IHA   K     ++ ++  ++ +Y   G +  A  +F++ 
Sbjct: 48  VFSSLLHQFSNTLI--HVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQC 105

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            +        +I G+ ++    E   LFR M   D+E +    +  L AC+   L +E  
Sbjct: 106 SLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACT-DLLDDEVG 164

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
               R    +     +   S +V+ L + G L +A+ + + MP K  +  W +++
Sbjct: 165 MEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEK-DVVCWNSII 218


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/732 (34%), Positives = 394/732 (53%), Gaps = 87/732 (11%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN------------------------ 64
           +  +QL G L K GF  D  +   ++DM+ +CG ++                        
Sbjct: 179 EVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGY 238

Query: 65  -------GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLS 117
                   A  +F+ M ER+VVSW  ++    Q+G A+  LS+   M +  V+ +  T +
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           +++ A   LSS+  G Q+H   ++S    +P V ++++++Y+KCG   EA R+F  +  +
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR 358

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           + ++W  +I G++  G   + L LF +M+      D+F   + +  C +   +    Q+H
Sbjct: 359 NTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLH 418

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
              + SG   +V  VI+ SL+  Y KCG L  A  +F  +E++ ++SW+ ++  Y+Q  N
Sbjct: 419 SLSLKSGHTRAV--VISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGN 476

Query: 298 LAEAMELFRQLRERSL---------------QVDGFVLSSMM--------------GVF- 327
           + +A E F  +  R++               + DG  + S M               +F 
Sbjct: 477 IGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536

Query: 328 --ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD    + G QI  +  KV   LDTSV N+++ MY KCG I EA ++F+ +  K++V+
Sbjct: 537 GCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS 596

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +ITGY +HG+ K+A+ +F  ML    +PD ++Y+AVLS+CSHSGLV+E + YF  L 
Sbjct: 597 WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLK 656

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  + P +EH+SC+VD L RAG L EAKNLI+ MP+KP+  +W  LLSAC+ HG+ EL 
Sbjct: 657 RDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               + L  LD  +   Y++++ I+ADAG   +  ++RKL R KG+KK  G SW+EV  +
Sbjct: 717 ELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNK 776

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV---H 622
           +H F   D +HP    I + L E+ +++  +LG+V              + ESLR    H
Sbjct: 777 VHVFKAEDVSHPQVIAIREKLDELMEKIA-QLGYV--------------RTESLRSEIHH 821

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SEKLA+      G +N      I + KNLR+CGDCH  IK +S +    FV+RDA RFH 
Sbjct: 822 SEKLAVAF----GIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHH 877

Query: 683 FEGGVCSCGDYW 694
           F+GG CSCGDYW
Sbjct: 878 FKGGSCSCGDYW 889



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/602 (26%), Positives = 268/602 (44%), Gaps = 115/602 (19%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---------- 62
           Q LAD+LR C     L     LHG LV +G +  + L N L+  Y  CG           
Sbjct: 29  QALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRG 88

Query: 63  -------------MNG---------ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                        MNG         A  +F +M  R+V SW  LM G+ Q+G     +  
Sbjct: 89  DITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMES 148

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FT    +K+ G L   E  +Q+ G+  K GF+ +P V   I+DM+ 
Sbjct: 149 FVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFV 208

Query: 160 KCGRINEAAR-------------------------------MFDVMPAKSLITWNAMIAG 188
           +CG ++ A++                               +F+ MP + +++WN M++ 
Sbjct: 209 RCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSA 268

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G + + L +   M   G   D  T+TS+L AC  L S+G G Q+H  +I S  P  
Sbjct: 269 LSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS-LP-C 326

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A ++V+ Y KCGC  EARRVF  +  ++ +SW+ LI G+ Q    +E++ELF Q+
Sbjct: 327 IDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQM 386

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC--- 365
           R   + VD F L++++   ++   +   +Q+H+ + K        +SNS++ MY KC   
Sbjct: 387 RAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNL 446

Query: 366 ----------------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                       G I +A E F+ M  +NV+TW  ++  Y +HG
Sbjct: 447 QNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHG 506

Query: 398 LAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR------LCNDKRM 450
             ++ + ++  ML + DV PD V Y+ +   C+  G  +   +          + +   M
Sbjct: 507 AEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVM 566

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
              I  YS       + GR+ EA+ + + +  K  ++ W  +++    HG   +G++  E
Sbjct: 567 NAVITMYS-------KCGRISEARKIFDFLSRKDLVS-WNAMITGYSQHG---MGKQAIE 615

Query: 511 IL 512
           I 
Sbjct: 616 IF 617



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 226/470 (48%), Gaps = 42/470 (8%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C+K   L +G QLH  +++     D  + + ++++YAKCG    A  VF  + +RN
Sbjct: 300 SLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRN 359

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSWT L+ GFLQ G     L LF QM +  +  ++F L+T I        +    Q+H 
Sbjct: 360 TVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHS 419

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRINE 166
           + +KSG     V+ NS+I MY+KC                               G I +
Sbjct: 420 LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGK 479

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACG 225
           A   FD M  +++ITWNAM+  Y+  G  + GL ++  M  E   IPD  T+ +  + C 
Sbjct: 480 AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCA 539

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            +G+   G QI G  +  G    + T +  +++  Y KCG + EAR++FD + +K ++SW
Sbjct: 540 DMGANKLGDQITGHTVKVGLI--LDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSW 597

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAY 342
           +++I GY+Q     +A+E+F  + ++  + D     +++   +   LV++GK    +   
Sbjct: 598 NAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKR 657

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLAKE 401
              V  GL+    + +VD+  + G + EA  L +EMP+K     W  +++    HG   E
Sbjct: 658 DHNVSPGLEH--FSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHG-NNE 714

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
              L  K L D   PD   Y+ +    + +G   +S +   +L  DK +K
Sbjct: 715 LAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQ-VRKLMRDKGIK 763


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/680 (36%), Positives = 382/680 (56%), Gaps = 48/680 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSSSV 109
           N+L+  Y+K G ++     F+K+ +R+ V+W  L+ G+  +G   A +  +   M   S 
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--------- 160
                TL T +K S     V  G QIHG  +K GFE   +VG+ ++DMYSK         
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 161 ----------------------CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                 CG I +A ++F  M   S ++W+AMI G    G   + 
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDS-VSWSAMIKGLAQNGMEKEA 251

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  FR+M+  G   D++ F S L ACG LG++  G QIH  +I +     +   +  +L+
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI--YVGSALI 309

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC CL  A+ VFD ++QK+V+SW+++++GY Q     EA+++F  ++   +  D +
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFN 376
            L   +   A+ + +E+G Q H  A  + +GL    +VSNS+V +Y KCG ID++T LFN
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKA--ITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM V++ V+WT +++ Y + G A EA+ LF KM+   ++PDGV    V+SACS +GLVE+
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            Q YF  + N+  + P   HYSC++D   R+GR++EA   I  MP +P    W TLLSAC
Sbjct: 488 GQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSAC 547

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R  G+LE+G+   E L+ LD  +P  Y ++S+I+A  G W+   +LR+  + K ++K  G
Sbjct: 548 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPG 607

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
           +SW++   ++H F   D++ P +++I+  L E+ +++ +  G+     +  HD++E  K 
Sbjct: 608 QSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDN-GYKPDTSFVHHDVEEAVKI 666

Query: 617 ESLRVHSEKLAI--GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           + L  HSE+LAI  GL  V  GL       IRV KNLRVC DCH   K +S +     +V
Sbjct: 667 KMLNCHSERLAIAFGLIFVPSGLP------IRVGKNLRVCVDCHNATKHISSVTGREILV 720

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFHRF+ G CSCGD+W
Sbjct: 721 RDAVRFHRFKDGTCSCGDFW 740



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 235/458 (51%), Gaps = 44/458 (9%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           FS    R  L   L+  S N  +  G Q+HG ++K+GF   L++ + L+DMY+K G ++ 
Sbjct: 130 FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISD 189

Query: 66  ACAVFDKMLERNVV------------------------------SWTALMCGFLQNGNAK 95
           A  VF  + +RN V                              SW+A++ G  QNG  K
Sbjct: 190 AKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             +  F +M    +K +++   + + A G L ++ +G QIH   +++  + +  VG+++I
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           DMY KC  ++ A  +FD M  K++++W AM+ GY   G + + + +F  MQ  G  PD +
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T    + AC ++ S+  G+Q HG  IT+G  + +   ++ SLV  Y KCG + ++ R+F+
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYI--TVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  +  +SW++++  YAQ     EA++LF ++ +  L+ DG  L+ ++   +   LVE+
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487

Query: 336 GKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVI 389
           G++     I+ Y   VPS    S    ++D++ + G I+EA    N MP + + + WT +
Sbjct: 488 GQRYFELMINEYGI-VPSNGHYSC---MIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTL 543

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           ++     G     +G +    L +++P   A   +LS+
Sbjct: 544 LSACRNKG--NLEIGKWAAESLIELDPHHPAGYTLLSS 579



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 204/463 (44%), Gaps = 79/463 (17%)

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           S  IK    L +  +   IHG  +++       + N+I+  Y+       A R+FD +P 
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 177 KSLITWNAMIAGY--------------------------VLAGYSDKGLL------LFRK 204
            +L +WN ++  Y                          ++ GYS  GL+          
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 126

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M++        T  + LK   S G V  G QIHG +I  GF   +  ++   L+D Y K 
Sbjct: 127 MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL--LVGSPLLDMYSKV 184

Query: 265 GCLVEARRVF---------------------DLIE---------QKSVISWSSLILGYAQ 294
           GC+ +A++VF                      +IE         +K  +SWS++I G AQ
Sbjct: 185 GCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQ 244

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA+E FR+++   L++D +   S++        +  G+QIHA   +        V
Sbjct: 245 NGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYV 304

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            ++++DMY KC  +  A  +F+ M  KNVV+WT ++ GYG+ G A EAV +F  M    +
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGI 364

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRL 470
           +PD       +SAC++   +EE  ++     + K +   + HY  + +SL    G+ G +
Sbjct: 365 DPDHYTLGQAISACANISSLEEGSQF-----HGKAITAGLIHYITVSNSLVTLYGKCGDI 419

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           D++  L   M V+  ++ W  ++SA       + GR V  I L
Sbjct: 420 DDSTRLFNEMNVRDEVS-WTAMVSAY-----AQFGRAVEAIQL 456



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 174/382 (45%), Gaps = 73/382 (19%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           +++ +K C  LG+      IHG +I +  P+  +T +  ++V  Y      + ARRVFD 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRT-LPHP-ETFLHNNIVHAYALIRSSIYARRVFDG 63

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQVDGFVLSSMMG------ 325
           I Q ++ SW++L+L Y++  +L+E    F +L +R     ++ ++G+ LS ++G      
Sbjct: 64  IPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 123

Query: 326 --VFADFAL-------------------VEQGKQIHAY---------------------- 342
             +  DF+                    V  GKQIH                        
Sbjct: 124 NTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSK 183

Query: 343 ------AAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
                 A KV  GLD   T + N+++   L CG+I++A +LF  M  K+ V+W+ +I G 
Sbjct: 184 VGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKGL 242

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            ++G+ KEA+  FR+M ++ ++ D   + +VL AC   G + + ++  + +     ++  
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIR-TNLQDH 301

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           I   S ++D   +   L  AK + + M  K ++  W  ++     +G      E  +I L
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAGEAVKIFL 357

Query: 514 RLD--GDNPVNYVMMSNIHADA 533
            +   G +P +Y +   I A A
Sbjct: 358 DMQRSGIDPDHYTLGQAISACA 379


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/714 (34%), Positives = 401/714 (56%), Gaps = 36/714 (5%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF+LVS    +A +     K   L  G Q+HG   + G  +    NN L+ MYAK G ++
Sbjct: 113 SFTLVS----MALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLD 167

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A ++     +R++V+W +++  F QN      L     M    VKP+  T ++ + A  
Sbjct: 168 DAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACS 227

Query: 125 VLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
            L  +  G +IH   +++     N  VG++++DMY  CG++     +FD +  + +  WN
Sbjct: 228 HLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWN 287

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           AMIAGY  + + +K L+LF +M+   G   +  T +S + A      +     IHG++I 
Sbjct: 288 AMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIK 347

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G        +  +L+D Y + G +  ++R+FD +E + ++SW+++I  Y      ++A+
Sbjct: 348 RGL--ETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405

Query: 303 ELFRQL----------------RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
            L  ++                ++   + +   L +++   A  + + +GK+IHAYA + 
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                 +V +++VDMY KCG ++ A  +F++MP++NV+TW VII  YG HG  KE++ LF
Sbjct: 466 LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF 525

Query: 407 RKMLLD-----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
             M+ +     +V+P  V ++A+ ++CSHSG+V+E    F ++ N+  ++P  +HY+CIV
Sbjct: 526 EDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIV 585

Query: 462 DSLGRAGRLDEAKNLIESMPVK-PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           D +GRAG+++EA  L+ +MP     +  W +LL ACR++ ++E+G    E LL+L  D  
Sbjct: 586 DLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVA 645

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
            +YV++SNI++ AG W++   LR+  ++ G+KK  G SW+E   E+H F  GD +HP +E
Sbjct: 646 SHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSE 705

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           K+H  L  + +R+K+E G+V      LHDI EE KE  L  HSEKLAI      G LN  
Sbjct: 706 KLHDFLETLSERLKKE-GYVPDTACVLHDIDEEEKETILCGHSEKLAIAF----GILNTP 760

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           PG  IRV KNLRVC DCH   K +SKI     ++RDA RFH F+ G CSCGDYW
Sbjct: 761 PGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 246/494 (49%), Gaps = 30/494 (6%)

Query: 31  GVQLHGALVKMGF-SFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G Q+H  + K G+ SF  + ++N L++MY KCG +  A  VFD++ ER+ VSW +++   
Sbjct: 29  GKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISAL 88

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSGFE 145
            +    +  +  F  M     +P+ FTL +   A   L   +    G QIHG C + G  
Sbjct: 89  CRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-H 147

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W     N+++ MY+K GR+++A  +  +   + L+TWN+MI+ +       + L+  R M
Sbjct: 148 WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLM 207

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G  PD  TF S L AC  L  +  G +IH + + +       + +  +LVD Y  CG
Sbjct: 208 VLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE-NSFVGSALVDMYCNCG 266

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMM 324
            +   R VFD +  + +  W+++I GYAQ E+  +A+ LF ++   + L  +   +SS++
Sbjct: 267 QVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIV 326

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKN 382
             +     + + + IH Y  K   GL+T+  + N+++DMY + G I  +  +F+ M  ++
Sbjct: 327 PAYVRCEGISRKEGIHGYVIK--RGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRD 384

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD----------------VEPDGVAYLAVLS 426
           +V+W  IIT Y   G + +A+ L  +M   +                 +P+ +  + VL 
Sbjct: 385 IVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLP 444

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            C+    + + +E  +    +  +  ++   S +VD   + G L+ A+ + + MP++ ++
Sbjct: 445 GCASLSALAKGKEIHAYAIRN-LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NV 502

Query: 487 AIWQTLLSACRVHG 500
             W  ++ A  +HG
Sbjct: 503 ITWNVIIMAYGMHG 516



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 195/416 (46%), Gaps = 36/416 (8%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF-EWNPV-VGNSIIDMYSKC 161
           M  S   P+ F     +KA   +  +  G QIH    K G+  ++ V + N++++MY KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G + +A ++FD +  +  ++WN++I+        +  +  FR M   G  P  FT  S  
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 222 KACGSLGSVGG---GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
            AC +L    G   G QIHG     G     +T    +L+  Y K G L +A+ +  L E
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKG---HWRTFSNNALMAMYAKLGRLDDAKSLLVLFE 177

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
            + +++W+S+I  ++Q E   EA+   R +    ++ DG   +S++   +   L+  GK+
Sbjct: 178 DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKE 237

Query: 339 IHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           IHAYA +    ++ S V +++VDMY  CG ++    +F+ +  + +  W  +I GY +  
Sbjct: 238 IHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSE 297

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             ++A+ LF       +E +  A L   +A + S +V      + R C     K  I  Y
Sbjct: 298 HDEKALMLF-------IEMEAAAGLYS-NATTMSSIVPA----YVR-CEGISRKEGIHGY 344

Query: 458 -------------SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
                        + ++D   R G +  +K + +SM  +  I  W T++++  + G
Sbjct: 345 VIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWNTIITSYVICG 399


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/693 (35%), Positives = 393/693 (56%), Gaps = 16/693 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALV--KMGFSFDLMLNNDLIDMYAKCGEMNG 65
           LV      A   + C++   L  G  LH  +        F+L L N +++MYAKCG ++ 
Sbjct: 59  LVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDY 118

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+M E+N+VSWTAL+ G+ Q+G +  C  +F  M     +P EF  ++ I A G 
Sbjct: 119 AHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QPTEFAFASVISACG- 176

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK-CGRINEAARMFDVMPAKSLITWNA 184
                 G Q+H + +K+ F+    VGN++I MY K CG  +EA  +++ M  ++L++WN+
Sbjct: 177 -GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNS 235

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA-CGSLGSVGGGTQIHGFLITS 243
           MIAG+ + G  ++ L LF +M   G   D  T  S     CG    +    Q+    I +
Sbjct: 236 MIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKT 295

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLV-EARRVF-DLIEQKSVISWSSLILGYAQEENLAEA 301
           GF   +K  +A +LV  Y   G  V +  R+F +L  ++ V+SW+ +I  +A E +  +A
Sbjct: 296 GFI--LKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFA-ERDPKKA 352

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + +FRQ     L  D  + S ++   A  A       + ++  KV    D  ++N+++  
Sbjct: 353 LVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHA 412

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
             +CG +  + ++F++M  ++ V+W  ++  Y  HG  KEA+ LF +M   D +PDG  +
Sbjct: 413 CARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATF 469

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           +A+LSACSH+G+ EE  + F  + N+  + P+++HY+C+VD LGRAG++ EAK LI+ MP
Sbjct: 470 VALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMP 529

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           ++P   +W  LL +CR HG+ +L +     L  LD +N + YV+MSNI    G +NE   
Sbjct: 530 MEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARL 589

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R+    K ++K  G SW+EV  ++H F  G   HP  E I   L E+ +R+K +LG+V 
Sbjct: 590 IRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLK-DLGYVP 648

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
            +  ALHDI++E KEE L  HSEKLA+  AL+  G     G  I++ KN+R+C DCH F+
Sbjct: 649 QISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFM 708

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K  S+++ +  VVRD+ RFH F+  VCSC DYW
Sbjct: 709 KLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/683 (37%), Positives = 389/683 (56%), Gaps = 10/683 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           LA  L+ C +   L  G  LH  LV  G +     L N LI MY+ C ++  A  +F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             RN VSWT L+ G  QN      L+ F  M  + V P  F LS+  +A+  L +   G 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H + ++ GF+    V +++ DMYSKCG ++EA R+FD MP K  + W AMI GY   G
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 194 YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             +  +L FR M+  G +  D+  F S L A G L        IH  +  +GF   V   
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEV--A 260

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +  +L+D Y K   +  A RV  +     +V+S +S+I GY + + + EA+ ++ +LR +
Sbjct: 261 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 320

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ + F  SSM+   A  AL+EQG Q+HA   K     D+ V +++VDMY KCGLI  +
Sbjct: 321 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 380

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            +LFNE+  +  + W  +I  + +HG  +EA+  F +M+   + P+ +A++++L+ACSH+
Sbjct: 381 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 440

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E  +YF  +     ++P+ EHYSCI+D+ GRAGRLDEA   I  MP+KP+   W +
Sbjct: 441 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 500

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL ACR+ G  ELG    + L++L+  N   +V +S I+A  G W + + +RKL R   +
Sbjct: 501 LLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 560

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK+ G SWV+ +K+ H F   D +HP  + I++ L E+  R+KEE G++    +   +++
Sbjct: 561 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEE-GYIPDTSFLPCNLE 619

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           + +KE  LR HSE++A+  AL+    +    K I V KNLR+C DCH   K + K+ +  
Sbjct: 620 DIAKERILRYHSERIAVAFALI----SMPATKPIIVKKNLRICIDCHTAFKFICKVERRD 675

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRD +RFH F  G CSCGDYW
Sbjct: 676 IIVRDNSRFHHFVNGRCSCGDYW 698


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/662 (35%), Positives = 375/662 (56%), Gaps = 40/662 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF+ + E N++ W  +  G   + +  + L L+  M S  + PN +T    +K+   
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR---------------- 169
           L + + G+QIHG  +K G+E +  V  S+I MY +  R+ +A +                
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 170 ---------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                          MFD +P K +++WNAMI+GYV  G   + L LF++M +    PDE
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + + A    GS+  G Q+H ++   GF  ++K  I  +L+DFY KCG +  A  +F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLK--IVNALIDFYSKCGEMETACGLF 253

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             +  K VISW+ LI GY       EA+ LF+++       +   + S++   A    ++
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313

Query: 335 QGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K   G+   +S+  S++DMY KCG I+ A ++FN M  K++  W  +I G
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFG 373

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A  A  +F +M  ++++PD + ++ +LSACSH+G+++  +  F  + ++ ++ P
Sbjct: 374 FAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITP 433

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LG +G   EA+ +I +M ++P   IW +LL AC++HG++ELG +  + L
Sbjct: 434 KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL 493

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
            +++ +NP +YV++SNI+A AG WNE  R+R L   KG+KKV G S +E+D  +H F  G
Sbjct: 494 FKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIG 553

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP   +I+ +L EME  ++E  GFV      L +++EE KE +LR HSEKLAI   L
Sbjct: 554 DKFHPRNREIYGMLEEMEVLLQEA-GFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGL 612

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    + +P   + + KNLRVC +CHE  K +SKI K   + RD TRFH F  GVCSC D
Sbjct: 613 I----STKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 668

Query: 693 YW 694
           YW
Sbjct: 669 YW 670



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 231/509 (45%), Gaps = 76/509 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K      G+Q+HG ++K+G+  DL ++  LI MY +   +
Sbjct: 55  ISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERL 114

Query: 64  NGACAVFDKMLERNVVS-------------------------------WTALMCGFLQNG 92
             A  VFD+   R+VVS                               W A++ G+++ G
Sbjct: 115 EDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETG 174

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L LF +M  ++V+P+E T+ T I AS    S+E G Q+H      GF  N  + N
Sbjct: 175 NYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVN 234

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++ID YSKCG +  A  +F  +  K +I+WN +I GY       + LLLF++M   GE P
Sbjct: 235 ALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESP 294

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A +
Sbjct: 295 NDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQ 354

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ +  KS+ +W+++I G+A       A ++F ++R+  ++ D      ++   +   +
Sbjct: 355 VFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGM 414

Query: 333 VEQGKQI-----HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           ++ G+ I     H Y  K+   L+      ++D+    GL  EA E+ + M         
Sbjct: 415 LDLGRHIFRSMTHNY--KITPKLEH--YGCMIDLLGHSGLFKEAEEMISTM--------- 461

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
                                     +EPDGV + ++L AC   G VE  +++   L   
Sbjct: 462 -------------------------TMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKI 496

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           +   P    Y  + +    AGR +E   +
Sbjct: 497 EPNNPG--SYVLLSNIYATAGRWNEVARI 523


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/679 (34%), Positives = 386/679 (56%), Gaps = 11/679 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G  +H  L   G + + + +  L +MY KC     A  VFD+M  R+ 
Sbjct: 23  LKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDR 82

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS--VKPNEFTLSTNIKASGVLSSVENGMQIH 136
           V+W A++ G+ +NG   + +    +M       +P+  TL + + A     ++    ++H
Sbjct: 83  VAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVH 142

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +++G +    V  +++D Y KCG +  A  +FD MP ++ ++WNAMI GY   G + 
Sbjct: 143 AFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNAT 202

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + + LF +M + G    + +  + L+ACG LG +    ++H  L+  G   +V   +  +
Sbjct: 203 EAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS--VTNA 260

Query: 257 LVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           L+  Y KC     A +VF +L  +K+ ISW+++ILG+ Q E   +A  LF +++  +++ 
Sbjct: 261 LITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRP 320

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F L S++   AD +   Q + IH Y+ +     D  V  +++DMY KCG +  A  LF
Sbjct: 321 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLF 380

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +    ++V+TW  +I GYG HG  + AV LF +M      P+   +L+VL+ACSH+GLV+
Sbjct: 381 DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 440

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E Q+YF+ +  D  ++P +EHY  +VD LGRAG+LDEA + I++MP++P I+++  +L A
Sbjct: 441 EGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++H ++EL  E  +I+  L  +  V +V+++NI+A+A  W +  R+R     KGL+K  
Sbjct: 501 CKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTP 560

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G S +++  E+H FY G   H   + I+  L ++ + +K ++G+V     ++HD++++ K
Sbjct: 561 GWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIK-DMGYVPDTD-SIHDVEDDVK 618

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
            + L  HSEKLAI   L+R      PG  I++ KNLRVC DCH   K +S +     ++R
Sbjct: 619 AQLLNTHSEKLAIAYGLIRTA----PGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMR 674

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F+ G CSCGDYW
Sbjct: 675 DIQRFHHFKDGKCSCGDYW 693



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 197/394 (50%), Gaps = 17/394 (4%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           T +  +K     + +  G  +H      G     +   ++ +MY KC R  +A R+FD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ--EHGEIPDEFTFTSTLKACGSLGSVGG 232
           P++  + WNA++AGY   G     +    +MQ  E GE PD  T  S L AC    ++  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
             ++H F + +G    V   ++ +++D Y KCG +  AR VFD +  ++ +SW+++I GY
Sbjct: 138 CREVHAFALRAGLDELVN--VSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 293 AQEENLAEAMELFRQLRERSLQV-DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           A   N  EAM LF ++ +  + V D  VL+++     +   +++ +++H    +V    +
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQAC-GELGYLDEVRRVHELLVRVGLSSN 254

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKML 410
            SV+N+++  Y KC   D A ++FNE+  K   ++W  +I G+ ++   ++A  LF +M 
Sbjct: 255 VSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQ 314

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH----YSCIVDSLGR 466
           L++V PD    ++V+ A     + + S    +R  +   ++ +++      + ++D   +
Sbjct: 315 LENVRPDSFTLVSVIPA-----VADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSK 369

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            GR+  A+ L +S   +  I  W  ++     HG
Sbjct: 370 CGRVSIARRLFDSARDRHVI-TWNAMIHGYGSHG 402



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 186/370 (50%), Gaps = 6/370 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L    ++H   ++ G    + ++  ++D Y KCG +  A AVFD M 
Sbjct: 122 LVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP 181

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN VSW A++ G+  NGNA   ++LF +M    V   + ++   ++A G L  ++   +
Sbjct: 182 VRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRR 241

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAG 193
           +H + ++ G   N  V N++I  Y+KC R + AA++F+ +   K+ I+WNAMI G+    
Sbjct: 242 VHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNE 301

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             +    LF +MQ     PD FT  S + A   +        IHG+ I       V  + 
Sbjct: 302 CPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLT 361

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           A  L+D Y KCG +  ARR+FD    + VI+W+++I GY        A+ELF +++    
Sbjct: 362 A--LIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGS 419

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
             +     S++   +   LV++G++  A + K   GL+  + +  ++VD+  + G +DEA
Sbjct: 420 LPNETTFLSVLAACSHAGLVDEGQKYFA-SMKKDYGLEPGMEHYGTMVDLLGRAGKLDEA 478

Query: 372 TELFNEMPVK 381
                 MP++
Sbjct: 479 WSFIKNMPIE 488


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/659 (35%), Positives = 372/659 (56%), Gaps = 35/659 (5%)

Query: 45  FDLMLNNDLIDM------YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FDLM   D++        YA+ G ++ A  VFD M E+N +SW  L+  ++ NG  +   
Sbjct: 134 FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG---MQIHGMCMKSGFEWNPVVGNSII 155
            LF        K +   +S N    G +   + G        M ++    WN     ++I
Sbjct: 194 LLF------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-----TMI 242

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
             Y++ G +++A R+FD  P + + TW AM++GYV  G  D+    F +M E  E+    
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV---- 298

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           ++ + +        +    ++   +       S  T+I G     Y + G + +AR+ FD
Sbjct: 299 SYNAMIAGYVQTKKMDIARELFESMPCRNIS-SWNTMITG-----YGQIGDIAQARKFFD 352

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
           ++ Q+  +SW+++I GYAQ  +  EA+ +F ++++    ++       +   AD A +E 
Sbjct: 353 MMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALEL 412

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GKQIH  A K+  G    V N+++ MY KCG IDEA + F  +  K+VV+W  ++ GY +
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR 472

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG  ++A+ +F  M    V+PD +  + VLSACSH+GL++   EYF  +  D  + P  +
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HY+C++D LGRAGRL+EA++LI +MP +P  A W  LL A R+HG+ ELG +  E++ ++
Sbjct: 533 HYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           +  N   YV++SN++A +G W + +++R   R  G++KV G SWVEV  +IH F  GD +
Sbjct: 593 EPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCS 652

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           HP  E+I+  L E++ +M+EE G+V   K  LHD++EE KE  L+ HSEKLA+   +   
Sbjct: 653 HPEKERIYAYLEELDLKMREE-GYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI--- 708

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            L    G+ IRV KNLRVC DCH  IK +SKI+  + ++RD+ RFH F  G CSCGDYW
Sbjct: 709 -LTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 61/402 (15%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N  I  + + G  + A  VF+ M  R+ VS+ A++ G+L+N       +LF QM 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                P     S N+  +G                                 Y +  R+ 
Sbjct: 107 -----PERDLFSWNVMLTG---------------------------------YVRNCRLG 128

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A R+FD+MP K +++WN++++GY   GY D+   +F  M E   I    ++   L A  
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSI----SWNGLLAAYV 184

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
             G +         L  S   + +  +    L+  +V+   L +AR +FD +  +  ISW
Sbjct: 185 HNGRIEEAC----LLFESKSDWDL--ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISW 238

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I GYAQ   L++A  LF +   R    D F  ++M+  +    ++++ K    +  +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAK---TFFDE 291

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +P   + S  N+++  Y++   +D A ELF  MP +N+ +W  +ITGYG+ G   +A   
Sbjct: 292 MPEKNEVSY-NAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKF 350

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           F  M     + D V++ A+++  + SG  EE+   F  +  D
Sbjct: 351 FDMM----PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 196/429 (45%), Gaps = 77/429 (17%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N  I  + + G  + A  +F+ MP +S +++NAMI+GY+     +    LF +M E    
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER--- 109

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D F++   L                                       YV+   L +AR
Sbjct: 110 -DLFSWNVMLTG-------------------------------------YVRNCRLGDAR 131

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMM-GVFAD 329
           R+FDL+ +K V+SW+SL+ GYAQ   + EA E+F  + E+ S+  +G + + +  G   +
Sbjct: 132 RLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
             L+ + K          S  D    N ++  +++   + +A  LF++MPV++ ++W  +
Sbjct: 192 ACLLFESK----------SDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GY + G   +A  LF +    DV      + A++S    +G+++E++ +F  +     
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE 297

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +      Y+ ++    +  ++D A+ L ESMP + +I+ W T+++     GD+   R+  
Sbjct: 298 VS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMITGYGQIGDIAQARKFF 351

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNEC-----------ERLRKLARSKGLKKVAGRS 558
           +++ + D    V++  +   +A +G + E            E L +      L   A  +
Sbjct: 352 DMMPQRD---CVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 559 WVEVDKEIH 567
            +E+ K+IH
Sbjct: 409 ALELGKQIH 417



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R     +L  C+    L+ G Q+HG  VKMG+     + N L+ MY KCG ++ A   F+
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE 453

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E++VVSW  ++ G+ ++G  +  L++F  M ++ VKP+E T+   + A      ++ 
Sbjct: 454 GIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR 513

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGY 189
           G +  + M    G          +ID+  + GR+ EA  +   MP +    +W A++   
Sbjct: 514 GTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGAS 573

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 574 RIHGNTELG 582


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/659 (36%), Positives = 372/659 (56%), Gaps = 35/659 (5%)

Query: 45  FDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FDLM   D      L+  YA+ G ++ A  VFD M E+N +SW  L+  ++ NG  +   
Sbjct: 134 FDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG---MQIHGMCMKSGFEWNPVVGNSII 155
            LF        K +   +S N    G +   + G        M ++    WN     ++I
Sbjct: 194 LLF------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-----TMI 242

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
             Y++ G +++A R+FD  P + + TW AM++GYV  G  D+    F +M E  E+    
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV---- 298

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           ++ + +        +    ++   +       S  T+I G     Y + G + +AR+ FD
Sbjct: 299 SYNAMIAGYVQTKKMDIARELFESMPCRNIS-SWNTMITG-----YGQIGDIAQARKFFD 352

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
           ++ Q+  +SW+++I GYAQ  +  EA+ +F ++++    ++       +   AD A +E 
Sbjct: 353 MMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALEL 412

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GKQIH  A K+  G    V N+++ MY KCG IDEA + F  +  K+VV+W  ++ GY +
Sbjct: 413 GKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR 472

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG  ++A+ +F  M    V+PD +  + VLSACSH+GL++   EYF  +  D  + P  +
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HY+C++D LGRAGRL+EA++LI +MP +P  A W  LL A R+HG+ ELG +  E++ ++
Sbjct: 533 HYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           +  N   YV++SN++A +G W + +++R   R  G++KV G SWVEV  +IH F  GD +
Sbjct: 593 EPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCS 652

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           HP  E+I+  L E++ +M+EE G+V   K  LHD++EE KE  L+ HSEKLA+   +   
Sbjct: 653 HPEKERIYAYLEELDLKMREE-GYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI--- 708

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            L    G+ IRV KNLRVC DCH  IK +SKI+  + ++RD+ RFH F  G CSCGDYW
Sbjct: 709 -LTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 61/402 (15%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N  I  + + G  + A  VF+ M  R+ VS+ A++ G+L+N       +LF QM 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                P     S N+  +G                                 Y +  R+ 
Sbjct: 107 -----PERDLFSWNVMLTG---------------------------------YVRNCRLG 128

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A R+FD+MP K +++WN++++GY   GY D+   +F  M E   I    ++   L A  
Sbjct: 129 DARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSI----SWNGLLAAYV 184

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
             G +         L  S   + +  +    L+  +V+   L +AR +FD +  +  ISW
Sbjct: 185 HNGRIEEAC----LLFESKSDWDL--ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISW 238

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I GYAQ   L++A  LF +   R    D F  ++M+  +    ++++ K    +  +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAK---TFFDE 291

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +P   + S  N+++  Y++   +D A ELF  MP +N+ +W  +ITGYG+ G   +A   
Sbjct: 292 MPEKNEVSY-NAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKF 350

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           F  M     + D V++ A+++  + SG  EE+   F  +  D
Sbjct: 351 FDMM----PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 196/429 (45%), Gaps = 77/429 (17%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N  I  + + G  + A  +F+ MP +S +++NAMI+GY+     +    LF +M E    
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER--- 109

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D F++   L                                       YV+   L +AR
Sbjct: 110 -DLFSWNVMLTG-------------------------------------YVRNCRLGDAR 131

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMM-GVFAD 329
           R+FDL+ +K V+SW+SL+ GYAQ   + EA E+F  + E+ S+  +G + + +  G   +
Sbjct: 132 RLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
             L+ + K          S  D    N ++  +++   + +A  LF++MPV++ ++W  +
Sbjct: 192 ACLLFESK----------SDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GY + G   +A  LF +    DV      + A++S    +G+++E++ +F  +     
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE 297

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +      Y+ ++    +  ++D A+ L ESMP + +I+ W T+++     GD+   R+  
Sbjct: 298 VS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMITGYGQIGDIAQARKFF 351

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNEC-----------ERLRKLARSKGLKKVAGRS 558
           +++ + D    V++  +   +A +G + E            E L +      L   A  +
Sbjct: 352 DMMPQRDC---VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 559 WVEVDKEIH 567
            +E+ K+IH
Sbjct: 409 ALELGKQIH 417



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 60/265 (22%)

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           ++GL++   EYF  +  +  + P  +HY+C++D LGR  RL+E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             LL A R+HG+ ELG +  ++  ++   N       S I                 R  
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQN-------SGISK--------------MRDV 857

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           G++KV G SW EV  +IH F  G                   R +E +GF+  +   +  
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG---------------LFLSRERENIGFLEELDLKMR- 901

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
            +EE KE +L+  SE LA  L ++   +  +P +V++  K + VC DC   IK +SKI+ 
Sbjct: 902 EREEEKERTLKYLSENLAAALGILTIPVG-RPNRVMK--KRVYVCEDCRSAIKHMSKIVG 958

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
            +  +RD+   HRF   +CSCG+YW
Sbjct: 959 RLITLRDS---HRFNESICSCGEYW 980



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R     +L  C+    L+ G Q+HG  VKMG+     + N L+ MY KCG ++ A   F+
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE 453

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E++VVSW  ++ G+ ++G  +  L++F  M ++ VKP+E T+   + A      ++ 
Sbjct: 454 GIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR 513

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGY 189
           G +  + M    G          +ID+  + GR+ EA  +   MP +    +W A++   
Sbjct: 514 GTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGAS 573

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 574 RIHGNTELG 582


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/666 (34%), Positives = 381/666 (57%), Gaps = 8/666 (1%)

Query: 30   YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            +G  +HG +VKMGF   + + N L+ MYA  G    A  VF +M  ++++SW +LM  F+
Sbjct: 380  WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFV 439

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             +G +   L + C M  +    N  T ++ + A       + G  +HG+ + SG   N +
Sbjct: 440  NDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQI 499

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            +GN+++ MY K G ++ + R+   MP + ++ WNA+I GY      DK L  F+ ++  G
Sbjct: 500  IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEG 559

Query: 210  EIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               +  T  S L AC   G +   G  +H +++++GF       +  SL+  Y KCG L 
Sbjct: 560  VSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEH--VKNSLITMYAKCGDLS 617

Query: 269  EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
             ++ +F+ ++ +S+I+W++++   A   +  E ++L  ++R   L +D F  S  +   A
Sbjct: 618  SSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAA 677

Query: 329  DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              A++E+G+Q+H  A K+   LD  + N+  DMY KCG I E  ++      +++ +W +
Sbjct: 678  KLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 737

Query: 389  IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
            +I+  G+HG  +E    F +ML   ++P  V ++++L+ACSH GLV++   Y+  +  D 
Sbjct: 738  LISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDF 797

Query: 449  RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
             ++P IEH  C++D LGR+GRL EA+  I  MP+KP+  +W++LL++C++H DL+ GR+ 
Sbjct: 798  GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKA 857

Query: 509  GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
             E L +L+ ++   +V+ SN+ A  G W + E +RK    K +KK    SWV++  ++  
Sbjct: 858  AENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 917

Query: 569  FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
            F  GD THP T +I+  L +++K +KE  G+V     AL D  EE KE +L  HSE+LA+
Sbjct: 918  FGIGDRTHPQTMEIYAKLEDIKKLIKES-GYVADTSQALQDTDEEQKEHNLWNHSERLAL 976

Query: 629  GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              AL    ++   G  +R+FKNLR+C DCH   K +S+++    V+RD  RFH FE G+C
Sbjct: 977  AYAL----MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLC 1032

Query: 689  SCGDYW 694
            SC DYW
Sbjct: 1033 SCKDYW 1038



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 233/478 (48%), Gaps = 33/478 (6%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH   VK      ++  N LI+MY K G +  A  +FDKM  RN VSW  +M G ++
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV-ENGMQIHGMCMKSGFEWNPV 149
            G     +  F +M    +KP+ F +++ + A G   S+   G+Q+HG   KSG   +  
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V  +I+ +Y   G ++ + ++F+ MP +++++W +++ GY   G  ++ + +++ M+  G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              +E + +  + +CG L     G QI G +I SG     K  +  SL+  +   G +  
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGL--ESKLAVENSLISMFGNMGNVDY 314

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  +F+ I ++  ISW+S++  YAQ  ++ E+  +F  +R    +V+   +S+++ V  D
Sbjct: 315 ANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGD 374

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               + G+ IH    K+       V N+++ MY   G  +EA  +F +MP K++++W  +
Sbjct: 375 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSL 434

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           +  +   G + +A+G+   M+      + V + + L+AC        S E+F        
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACF-------SPEFFD------- 480

Query: 450 MKPRIEHYSCIVDSL--------------GRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            K RI H   +V  L              G+ G +  ++ ++  MP +  +A W  L+
Sbjct: 481 -KGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVA-WNALI 536



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 246/503 (48%), Gaps = 22/503 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     +   GVQ+HG + K G   D+ ++  ++ +Y   G ++ +  VF++M +RNVVS
Sbjct: 169 CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 228

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM G+   G  +  + ++  M    V+ NE ++S  I + G+L     G QI G  +
Sbjct: 229 WTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVI 288

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG E    V NS+I M+   G ++ A  +F+ +  +  I+WN+++A Y   G+ ++   
Sbjct: 289 KSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSR 348

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F  M+   +  +  T ++ L   G +     G  IHG ++  GF   V   +  +L+  
Sbjct: 349 IFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVV--CVCNTLLRM 406

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y   G   EA  VF  +  K +ISW+SL+  +  +    +A+ +   +      V+    
Sbjct: 407 YAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTF 466

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +S +         ++G+ +H     V SGL  +  + N++V MY K G +  +  +  +M
Sbjct: 467 TSALAACFSPEFFDKGRILHGLV--VVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQM 524

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG-LVEES 437
           P ++VV W  +I GY ++    +A+  F+ + ++ V  + +  ++VLSAC   G L+E  
Sbjct: 525 PRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584

Query: 438 QEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +   + +      +D+ +K      + ++    + G L  +++L   +  + SI  W  +
Sbjct: 585 KPLHAYIVSAGFESDEHVK------NSLITMYAKCGDLSSSQDLFNGLDNR-SIITWNAI 637

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           L+A   HG    G EV +++ ++
Sbjct: 638 LAANAHHGH---GEEVLKLVSKM 657



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 7/386 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
              +L  C      D G  LHG +V  G   + ++ N L+ MY K G M+ +  V  +M 
Sbjct: 466 FTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP 525

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS-VENGM 133
            R+VV+W AL+ G+ +N +    L+ F  +    V  N  T+ + + A  V    +E G 
Sbjct: 526 RRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGK 585

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +H   + +GFE +  V NS+I MY+KCG ++ +  +F+ +  +S+ITWNA++A     G
Sbjct: 586 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHG 645

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + ++ L L  KM+  G   D+F+F+  L A   L  +  G Q+HG  +  GF   +   I
Sbjct: 646 HGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF--ELDCFI 703

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +  D Y KCG + E  ++      +S+ SW+ LI    +     E  E F ++ E  +
Sbjct: 704 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGI 763

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI--VDMYLKCGLIDEA 371
           +       S++   +   LV+QG   +   AK   GL+ ++ + I  +D+  + G + EA
Sbjct: 764 KPGHVTFVSLLTACSHGGLVDQGLAYYDMIAK-DFGLEPAIEHCICVIDLLGRSGRLAEA 822

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKH 396
               ++MP+K N + W  ++     H
Sbjct: 823 ETFISKMPMKPNDLVWRSLLASCKIH 848



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 203/378 (53%), Gaps = 29/378 (7%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  +H +C+K     + +  N++I+MY+K GR+  A  +FD MP ++ ++WN M++G V
Sbjct: 76  TGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSV 249
             G   +G+  F+KM + G  P  F   S + ACG  GS+   G Q+HGF+  SG    V
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              ++ +++  Y   G +  +R+VF+ +  ++V+SW+SL++GY+ +    E +++++ +R
Sbjct: 196 --YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253

Query: 310 ERSLQVDGFVLS---SMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLK 364
              ++ +   +S   S  G+  D +L   G+QI     K  SGL++  +V NS++ M+  
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESL---GRQIIGQVIK--SGLESKLAVENSLISMFGN 308

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM--LLDDVEPDGVA-Y 421
            G +D A  +FN++  ++ ++W  I+  Y ++G  +E+  +F  M    D+V    V+  
Sbjct: 309 MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR----AGRLDEAKNLI 477
           L+VL    H        + + R  +   +K   +   C+ ++L R    AGR +EA  + 
Sbjct: 369 LSVLGDVDH--------QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVF 420

Query: 478 ESMPVKPSIAIWQTLLSA 495
           + MP K  I+ W +L+++
Sbjct: 421 KQMPTKDLIS-WNSLMAS 437



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 151/307 (49%), Gaps = 5/307 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     LL+ G  LH  +V  GF  D  + N LI MYAKCG+++ +  +F+ +  R++++
Sbjct: 574 CLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT 633

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++     +G+ +  L L  +M S  +  ++F+ S  + A+  L+ +E G Q+HG+ +
Sbjct: 634 WNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 693

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GFE +  + N+  DMYSKCG I E  +M      +SL +WN +I+     GY ++   
Sbjct: 694 KLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCE 753

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS-GFPYSVKTVIAGSLVD 259
            F +M E G  P   TF S L AC   G V  G   +  +    G   +++  I   ++D
Sbjct: 754 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCIC--VID 811

Query: 260 FYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG- 317
              + G L EA      +  K + + W SL+       +L    +    L +   + D  
Sbjct: 812 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSV 871

Query: 318 FVLSSMM 324
           FVLSS M
Sbjct: 872 FVLSSNM 878



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 4/197 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF L  ++   ++ L   +K  +L+ G QLHG  VK+GF  D  + N   DMY+KCGE+ 
Sbjct: 659 SFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIG 718

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
               +    + R++ SW  L+    ++G  +     F +M    +KP   T  + + A  
Sbjct: 719 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS 778

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSI--IDMYSKCGRINEAARMFDVMPAK-SLIT 181
               V+ G+  + M  K  F   P + + I  ID+  + GR+ EA      MP K + + 
Sbjct: 779 HGGLVDQGLAYYDMIAKD-FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 837

Query: 182 WNAMIAGYVLAGYSDKG 198
           W +++A   +    D+G
Sbjct: 838 WRSLLASCKIHRDLDRG 854



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 4/192 (2%)

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           F+       G+ +HA   K    L    +N++++MY K G +  A  LF++MPV+N V+W
Sbjct: 68  FSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSW 127

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +++G  + GL  E +  F+KM    ++P      ++++AC  SG +            
Sbjct: 128 NTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVA 187

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              +   +   + I+   G  G +  ++ + E MP + ++  W +L+      G+ E   
Sbjct: 188 KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR-NVVSWTSLMVGYSDKGEPE--- 243

Query: 507 EVGEILLRLDGD 518
           EV +I   + G+
Sbjct: 244 EVIDIYKSMRGE 255


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/686 (36%), Positives = 385/686 (56%), Gaps = 13/686 (1%)

Query: 17  DSLRC------CSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAV 69
           DSL+C       + +  L   +QLH  +   G    +  L   L   YA CG M  A  +
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD+++ +N   W +++ G+  N +    L L+ +M     KP+ FT    +KA G L   
Sbjct: 81  FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G ++H + +  G E +  VGNSI+ MY K G +  A  +FD M  + L +WN M++G+
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGF 200

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V  G +     +F  M+  G + D  T  + L ACG +  +  G +IHG+++ +G    V
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRV 260

Query: 250 -KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +  S++D Y  C  +  AR++F+ +  K V+SW+SLI GY +  +  +A+ELF ++
Sbjct: 261 CNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRM 320

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
                  D   + S++      + +  G  + +Y  K    ++  V  +++ MY  CG +
Sbjct: 321 VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSL 380

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A  +F+EMP KN+   TV++TG+G HG  +EA+ +F +ML   V PD   + AVLSAC
Sbjct: 381 VCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSAC 440

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGLV+E +E F ++  D  ++PR  HYSC+VD LGRAG LDEA  +IE+M +KP+  +
Sbjct: 441 SHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV 500

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  LLSACR+H +++L     + L  L+ D    YV +SNI+A    W + E +R L   
Sbjct: 501 WTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAK 560

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           + L+K    S+VE++K +H F+ GD +H  ++ I+  L ++ +++K+  G+       L+
Sbjct: 561 RRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKA-GYKPDTSLVLY 619

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EE KE+ L  HSE+LA+  AL+  G    PG  IR+ KNLRVCGDCH  IK +SK+ 
Sbjct: 620 DVEEEIKEKMLWDHSERLALAFALINTG----PGTTIRITKNLRVCGDCHTVIKMISKLT 675

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
               ++RD  RFH F  G+CSCG YW
Sbjct: 676 NREIIMRDICRFHHFRDGLCSCGGYW 701


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/720 (32%), Positives = 395/720 (54%), Gaps = 74/720 (10%)

Query: 39  VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           VK  FS++ +L+      YAK G++  A  VFD +  R+ VSWT ++ G+ Q G  +  +
Sbjct: 38  VKTTFSWNTILSG-----YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAI 92

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            +F  M    V P +FTL+  + +     S   G ++H   +K G      V NS+++MY
Sbjct: 93  KIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMY 152

Query: 159 SK-------------------------------CGRINEAARMFDVMPAKSLITWNAMIA 187
           +K                               CGR++ A   F+++  + +++WN+MIA
Sbjct: 153 AKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIA 212

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           G    G+ ++ L  F  + +   + PD F+  S L AC +L  +  G QIHG+++ + F 
Sbjct: 213 GCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFD 272

Query: 247 YS-------------------------------VKTVIAGSLVDFYVKCGCLVEARRVFD 275
            S                               +  +   +L++ YVK G +  AR++F+
Sbjct: 273 ASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFN 332

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            ++   V++W+++I+GY Q     +A+E+F+ +     + + F L++M+   +    +  
Sbjct: 333 SLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNH 392

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM-PVKNVVTWTVIITGYG 394
           GKQIHA A +    L  SV N++  MY K G I+ A ++FN +   ++ V+WT +I    
Sbjct: 393 GKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALA 452

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +HGL +EA+ LF +ML   ++PD + Y+ VLSAC+H GLVE+ + YF  + N  ++ P +
Sbjct: 453 QHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTL 512

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
            HY+C+VD  GRAG L EA   +E+MP++P +  W +LLS+C+V+ +++L +   E LL 
Sbjct: 513 SHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLL 572

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           ++ +N   Y  ++N+++  G W++  ++RKL +++G+KK  G SWV++  + H F   D 
Sbjct: 573 IEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDG 632

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
            HP  ++I++++ ++ K +K ++GF    +  LHD++ E K++ LR HSEKLAI   ++ 
Sbjct: 633 LHPQKDEIYKMMDKIWKEIK-KMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIIS 691

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              N      +R+ KNLRVC DCH  IK +SK++    +VRDATRFH F+ G CSC DYW
Sbjct: 692 TPENT----TLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 230/491 (46%), Gaps = 81/491 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L  C+       G ++H  +VK+G    + + N L++MYAK G++  A  VFD+M 
Sbjct: 110 LTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK 169

Query: 75  -------------------------------ERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                          ER++VSW +++ G  Q+G     L  F  
Sbjct: 170 LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSS 229

Query: 104 -MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            +  +S+KP+ F+L++ + A   L  +  G QIHG  +++ F+ +  VGN++I MY+K G
Sbjct: 230 ILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSG 289

Query: 163 RINEAARMF------------------------DVMPAKSL---------ITWNAMIAGY 189
            +  A R+                         D+ PA+ +         + W AMI GY
Sbjct: 290 GVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGY 349

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V  G ++  + +F+ M   G  P+ FT  + L A  S+ S+  G QIH   I SG   ++
Sbjct: 350 VQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG--EAL 407

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQ-KSVISWSSLILGYAQEENLAEAMELFRQL 308
              +  +L   Y K G +  AR+VF+L+ Q +  +SW+S+I+  AQ     EA+ELF Q+
Sbjct: 408 SPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQM 467

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCG 366
               ++ D      ++       LVEQG+        V   +D ++S+   +VD++ + G
Sbjct: 468 LTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHK-IDPTLSHYACMVDLFGRAG 526

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGV-AY 421
           L+ EA +    MP++ +V+ W  +++    Y    LAK A     ++LL  +EP+   AY
Sbjct: 527 LLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAA---ERLLL--IEPNNSGAY 581

Query: 422 LAVLSACSHSG 432
            A+ +  S  G
Sbjct: 582 SALANVYSSCG 592



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 155/328 (47%), Gaps = 56/328 (17%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------ 60
           SL  +R  LA +L  C+    L +G Q+HG +V+  F     + N LI MYAK       
Sbjct: 235 SLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIA 294

Query: 61  ---------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
                                      G++  A  +F+ + + +VV+WTA++ G++QNG 
Sbjct: 295 RRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGL 354

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + +F  M S   +PN FTL+  + AS  ++S+ +G QIH   ++SG   +P VGN+
Sbjct: 355 NNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNA 414

Query: 154 IIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +  MY+K G IN A ++F+++   +  ++W +MI      G  ++ + LF +M   G  P
Sbjct: 415 LTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKP 474

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY--------SVKTVIA--GSLVDFYV 262
           D  T+   L AC            HG L+  G  Y         +   ++    +VD + 
Sbjct: 475 DHITYVGVLSAC-----------THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFG 523

Query: 263 KCGCLVEARR-VFDLIEQKSVISWSSLI 289
           + G L EA + V ++  +  VI+W SL+
Sbjct: 524 RAGLLQEAYKFVENMPMEPDVIAWGSLL 551



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 346 VPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
           V  GL  SV   N+++++Y K G   +A +LFNEMPVK   +W  I++GY K G  ++A 
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 404 GLFRKMLLDDVEP--DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            +F      D+ P  D V++  ++   +  G  E++ + F  +  DK +  +    + + 
Sbjct: 62  QVF------DLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLA 115

Query: 462 D--SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
              + G  G   +  + +  + +   + +  +LL+     GDL++ + V +   R+   N
Sbjct: 116 SCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFD---RMKLRN 172

Query: 520 PVNYVMMSNIHADAG 534
             ++  M ++H + G
Sbjct: 173 TSSWNAMISLHMNCG 187


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/635 (35%), Positives = 366/635 (57%), Gaps = 7/635 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G QLH  L K G S D ++   L+D+Y KCG++  A  +F+     NV
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++  F Q  +      LFCQM ++ ++PN+FT    ++       ++ G QIH +
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GFE +  V   +IDMYSK G + +A R+ +++  K +++W +MIAGYV        
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F++MQ+ G  PD     S +  C  + ++  G QIH  +  SG  YS    I  +LV
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSG--YSGDVSIWNALV 488

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y +CG + EA   F+ +E K  I+ + L+ G+AQ     EA+++F ++ +  ++ + F
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S +   A+ A ++QGKQIHA   K     +T V N+++ +Y KCG  ++A   F+EM
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +N V+W  IIT   +HG   EA+ LF +M  + ++P+ V ++ VL+ACSH GLVEE  
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  + ++  ++PR +HY+C++D  GRAG+LD AK  IE MP+     +W+TLLSAC+V
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G    + LL L+  +  +YV++SN +A    W   +++RK+ R +G++K  GRS
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV   +H F+ GD  HPL E+I+  L  +  R+  ++G+     +  HD ++E ++ +
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA-KVGYKQEKYHLFHDKEQEGRDPT 847

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
             VHSEKLA+   L    ++  P   +RV KNLRV
Sbjct: 848 DLVHSEKLAVTFGL----MSLPPCMPLRVIKNLRV 878



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 272/532 (51%), Gaps = 19/532 (3%)

Query: 15  LADSLRCCSKN-LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +LR C  N        ++H   V  G     ++ N LID+Y+K G +  A  VF+++
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+ VSW A++ G+ QNG  +  L L+ QM  + V P  + LS+ + +         G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IH    K GF     VGN++I +Y +CG    A R+F  MP +  +T+N +I+G+   G
Sbjct: 164 LIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCG 223

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + +  L +F +MQ  G  PD  T +S L AC SLG +  GTQ+H +L  +G   S   ++
Sbjct: 224 HGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI--SSDYIM 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            GSL+D YVKCG +  A  +F+  ++ +V+ W+ +++ + Q  +LA++ ELF Q++   +
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGI 341

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + + F    ++        ++ G+QIH+ + K     D  VS  ++DMY K G +++A  
Sbjct: 342 RPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   +  K+VV+WT +I GY +H   K+A+  F++M    + PD +   + +S C+    
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461

Query: 430 -HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
              GL   ++ Y S    D      +  ++ +V+   R GR+ EA +  E M +K  I  
Sbjct: 462 MRQGLQIHARIYVSGYSGD------VSIWNALVNLYARCGRIREAFSSFEEMELKDGIT- 514

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
              L+S     G   L  E  ++ +R+D  + V + + + + A + S N  E
Sbjct: 515 GNGLVSGFAQSG---LHEEALKVFMRMD-QSGVKHNVFTFVSALSASANLAE 562



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 255/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H    K GF  ++ + N +I +Y +CG    A  VF  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ V++  L+ G  Q G+ +  L +F +M  S + P+  T+S+ + A   L  ++ G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K+G   + ++  S++D+Y KCG +  A  +F+     +++ WN M+  +     
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   LF +MQ  G  P++FT+   L+ C     +  G QIH   + +GF   +   ++
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +ARRV +++++K V+SW+S+I GY Q E   +A+  F+++++  + 
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    + QG QIHA         D S+ N++V++Y +CG I EA   
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EM +K+ +T   +++G+ + GL +EA+ +F +M    V+ +   +++ LSA ++   +
Sbjct: 504 FEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  +R+          E  + ++   G+ G  ++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIIT 621

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 622 SCSQHG 627


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/674 (34%), Positives = 383/674 (56%), Gaps = 10/674 (1%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +KNL +   +  H  +        ++  N LI+ YAK  +++ A  +FD+M ERNVVSW+
Sbjct: 42  TKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWS 101

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ALM G+L NG +   + L   M S  +V PNE+ L+  I +      VE G Q HG+ +K
Sbjct: 102 ALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLK 161

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +GF ++  V N+++ MYSKC  + +A  +++ +P   ++ +N++++  V  GY  +GL +
Sbjct: 162 TGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEV 221

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
            R M       D+ TF +    C SL  +  G  +HG ++TS         ++ ++++ Y
Sbjct: 222 LRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDV--ECDAYVSSAIINMY 279

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCG  + AR VFD ++ ++V+ W++++    Q     EA+ LF ++ + +++ + F  +
Sbjct: 280 GKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYA 339

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
            ++   A  +    G  +H ++ K        V N++++MY K G I+ A ++F++M  +
Sbjct: 340 VLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHR 399

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           +++TW  +I G+  HGL K+A+ +F+ ML  +  P+ V +  VLSAC H GLV+E   Y 
Sbjct: 400 DIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYL 459

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             L     ++P +EHY+CIV  L + G+L+EA+N + + PVK  +  W+TLL+AC VH +
Sbjct: 460 HHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQN 519

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
             LGR V E +L +D ++   Y ++SNI+A    W+   ++RKL R K +KK  G SW+E
Sbjct: 520 YGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIE 579

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           +    H F   D+ HP   + +Q + E+   +K  LG+   +   LHD+++E KE  L  
Sbjct: 580 IGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIK-PLGYTPDIGAVLHDVEDEQKEYYLSY 638

Query: 622 HSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
           HSEKLAI       GL + P +  I V KNLR+C DCH  ++ +SK+   V VVRDA RF
Sbjct: 639 HSEKLAIAY-----GLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRF 693

Query: 681 HRFEGGVCSCGDYW 694
           H F  G CSC DYW
Sbjct: 694 HHFRDGRCSCLDYW 707



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 207/416 (49%), Gaps = 10/416 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA ++  C     ++ G Q HG L+K GFSF   + N L+ MY+KC  +  A  V++++ 
Sbjct: 136 LAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVP 195

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++V++ +++   ++NG  +  L +   M S SVK ++ T          L  +  G+ 
Sbjct: 196 VNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLH 255

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  + S  E +  V ++II+MY KCG+   A  +FD + +++++ W A++A     G 
Sbjct: 256 VHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGC 315

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF KM++     +EFT+   L AC  L +   G+ +HG    SGF + V  ++ 
Sbjct: 316 FEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHV--MVG 373

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L++ Y K G +  A++VF  +  + +I+W+++I G++      +A+ +F+ +      
Sbjct: 374 NALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEH 433

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +    + ++       LV++G     +  K   V  GL+      IV +  K G ++EA
Sbjct: 434 PNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYT--CIVSLLSKTGQLNEA 491

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                  PVK +VV W  ++     H      +G +    + +++P+ V    +LS
Sbjct: 492 RNFMRTAPVKWDVVAWRTLLNACHVH--QNYGLGRWVAEFVLEMDPNDVGTYTLLS 545



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 4/288 (1%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           VS S+  ++    ++   C+    L  G+ +HG ++      D  +++ +I+MY KCG+ 
Sbjct: 226 VSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKS 285

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  VFD +  RNVV WTA+M    QNG  +  L+LF +M   +VK NEFT +  + A 
Sbjct: 286 LMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNAC 345

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             LS+  NG  +HG   KSGF+ + +VGN++I+MY+K G I  A ++F  M  + +ITWN
Sbjct: 346 AGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWN 405

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG-TQIHGFLIT 242
           AMI G+   G   K LL+F+ M    E P+  TFT  L ACG LG V  G   +H  +  
Sbjct: 406 AMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQ 465

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLI 289
            G    ++      +V    K G L EAR        K  V++W +L+
Sbjct: 466 FGVQPGLEHYTC--IVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLL 511



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 139/285 (48%), Gaps = 5/285 (1%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           LK      ++  G  IH  LI +        +   SL++FY K   +  A  +FD + ++
Sbjct: 36  LKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPER 95

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
           +V+SWS+L+ GY       + + L + +  E ++  + ++L+  +    D   VE+G+Q 
Sbjct: 96  NVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQC 155

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H    K        V N++V MY KC ++ +A  ++NE+PV ++V +  I++   ++G  
Sbjct: 156 HGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYL 215

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           +E + + R M+ + V+ D V ++   S C S   L      +   L +D      +   S
Sbjct: 216 REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVS--S 273

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            I++  G+ G+   A+ + + +  + ++ +W  ++++C  +G  E
Sbjct: 274 AIINMYGKCGKSLMARGVFDGLQSR-NVVLWTAVMASCFQNGCFE 317


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/740 (32%), Positives = 389/740 (52%), Gaps = 80/740 (10%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTAL 84
           L    Q H  ++++    D  L   L+  YA    ++    +  +   +    + S+++L
Sbjct: 16  LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           +  F ++ +    L+ F  +    + P+ F L + IK+   L +++ G Q+H     SGF
Sbjct: 76  IHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGF 135

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--------------- 189
             + +V +S+  MY KC RI +A ++FD MP + ++ W+AMIAGY               
Sbjct: 136 LTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGE 195

Query: 190 ---------------VLAGYSDKGLL-----LFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
                          +LAG+ + G       +FR M   G  PD  T +  L A G L  
Sbjct: 196 MRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLED 255

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK--------- 280
           V  G Q+HG++I  G        +  +++D Y KCGC+ E  RVFD +E+          
Sbjct: 256 VVVGAQVHGYVIKQGL--GSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313

Query: 281 --------------------------SVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
                                     +V++W+S+I   +Q     EA+ELFR ++   ++
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   + S++    + + +  GK+IH ++ +     D  V ++++DMY KCG I  A   
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F++M   N+V+W  ++ GY  HG AKE + +F  ML    +PD V +  VLSAC+ +GL 
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLT 493

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE    ++ +  +  ++P++EHY+C+V  L R G+L+EA ++I+ MP +P   +W  LLS
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           +CRVH +L LG    E L  L+  NP NY+++SNI+A  G W+E  R+R++ +SKGL+K 
Sbjct: 554 SCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKN 613

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+EV  ++H    GD +HP  + I + L ++  +MK+  G++    + L D++E+ 
Sbjct: 614 PGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKS-GYLPKTNFVLQDVEEQD 672

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           KE+ L  HSEKLA+ L L    LN  PG+ ++V KNLR+C DCH  IK +S++      V
Sbjct: 673 KEQILCGHSEKLAVVLGL----LNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYV 728

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F+ GVCSCGD+W
Sbjct: 729 RDTNRFHHFKDGVCSCGDFW 748



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 2/168 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     L +G ++H   ++ G   D+ + + LIDMYAKCG +  A   FDKM   N+VSW
Sbjct: 386 CGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG-MCM 140
            A+M G+  +G AK  + +F  M  S  KP+  T +  + A       E G + +  M  
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIA 187
           + G E        ++ + S+ G++ EA  +   MP       W A+++
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/662 (36%), Positives = 378/662 (57%), Gaps = 8/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H  ++  G       N  LI  YA+ G +  A  VFDK  +  V +W A++  + + G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                LSL+ +M S  V+P+  T +  +KA      + +G +     +  G+  +  VG 
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++++Y+KCG+++EA R+FD M  + L+ W  MI G    G + + + ++R+M +     
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D       ++AC +LG    G  IHG++I       V  ++  SLVD Y K G L  A  
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDV--IVQTSLVDMYAKNGHLELASC 262

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF  +  K+VISWS+LI G+AQ      A++L   ++    + D   L S++   +    
Sbjct: 263 VFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGF 322

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ GK +H Y  +     D   S +++DMY KCG +  A  +F+++  ++ ++W  II  
Sbjct: 323 LKLGKSVHGYIVRRLH-FDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG  +EA+ LF +M   +V+PD   + ++LSA SHSGLVE+ + +FS + N+ +++P
Sbjct: 382 YGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQP 441

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
             +HY+C+VD L RAGR++EA+ LIESM  +P IAIW  LLS C  HG   +G    + +
Sbjct: 442 SEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKV 501

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L L+ D+P  Y ++SN  A A  W+E   +RK+ +  G+KKV G S +EV+ ++H F   
Sbjct: 502 LELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLME 561

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +H   E+I QVL +++  MK  +G+V   ++ LH+++EE KE  L  HSE+LAI   L
Sbjct: 562 DKSHHQYEEIMQVLGKLDYEMK-AMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGL 620

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
               LN  PG  + + KNLRVCGDCHE  K +SKI+    VVRD  RFH F+ GVCSCGD
Sbjct: 621 ----LNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGD 676

Query: 693 YW 694
           YW
Sbjct: 677 YW 678



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 218/414 (52%), Gaps = 15/414 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+++L L  G +     V  G+  D+ +   ++++YAKCG+M+ A  VFDKM  R++
Sbjct: 112 LKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDL 171

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V WT ++ G  QNG A+  + ++ QM    V+ +   +   I+A   L   + G+ IHG 
Sbjct: 172 VCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGY 231

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++     + +V  S++DMY+K G +  A+ +F  M  K++I+W+A+I+G+   G++   
Sbjct: 232 MIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNA 291

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L   MQ  G  PD  +  S L AC  +G +  G  +HG+++          V + +++
Sbjct: 292 LQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR---LHFDCVSSTAVI 348

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L  AR VFD I  +  ISW+++I  Y    +  EA+ LF Q+RE +++ D  
Sbjct: 349 DMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHA 408

Query: 319 VLSSMMGVFADFALVEQGK-----QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             +S++  F+   LVE+G+      ++ Y  + PS    +    +VD+  + G ++EA E
Sbjct: 409 TFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQ-PSEKHYAC---MVDLLSRAGRVEEAQE 464

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L   M  +  +  W  +++G   HG  K  +G      + ++ PD     +++S
Sbjct: 465 LIESMITEPGIAIWVALLSGCLNHG--KFLIGEMAAKKVLELNPDDPGIYSLVS 516



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 5/187 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF    +   L   L  CS+   L  G  +HG +V+    FD + +  +IDMY+KCG ++
Sbjct: 300 SFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLS 358

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  VFD++  R+ +SW A++  +  +G+ +  LSLF QM  ++VKP+  T ++ + A  
Sbjct: 359 FARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFS 418

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT- 181
               VE G     + M + ++  P   +   ++D+ S+ GR+ EA  + + M  +  I  
Sbjct: 419 HSGLVEKGRYWFSI-MVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAI 477

Query: 182 WNAMIAG 188
           W A+++G
Sbjct: 478 WVALLSG 484


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/789 (31%), Positives = 413/789 (52%), Gaps = 118/789 (14%)

Query: 13  QRLADSLRCCS--KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
            R A +LR C   +   L     +HG ++  GF     + N LID+Y K  E++ A  +F
Sbjct: 13  NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLF 72

Query: 71  DKMLE---------------------------------RNVVSWTALMCGFLQNGNAKAC 97
           D++ E                                 R+ V + A++ GF  N +  + 
Sbjct: 73  DEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSA 132

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASG-VLSSVENGMQIHGMCMKSGFEWNPVVGNSIID 156
           ++LFC+M     KP++FT ++ +     V+   +  +Q H   +KSG  +   V N+++ 
Sbjct: 133 INLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVS 192

Query: 157 MYSKCGR----INEAARMFDVMPAKS--------------------------------LI 180
           +YS+C      ++ A ++FD +P K                                 L+
Sbjct: 193 VYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLV 252

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            +NAMI+GYV  G   + L + R+M   G   DEFT+ S ++AC +   +  G Q+H ++
Sbjct: 253 AYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYV 312

Query: 241 IT-SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +    F +        SLV  Y KCG   EAR +F+ +  K ++SW++L+ GY    ++ 
Sbjct: 313 LRREDFSFHFDN----SLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 300 EAMELFRQLRERS--------------------------LQVDGF-----VLSSMMGVFA 328
           EA  +F++++E++                          ++ +GF       S  +   A
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                  G+Q HA   K+  G D+S+S  N+++ MY KCG+++EA ++F  MP  + V+W
Sbjct: 429 VLGAYCNGQQFHAQLVKI--GFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSW 486

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I   G+HG   EAV ++ +ML   + PD + +L VL+ACSH+GLV++ ++YF+ +  
Sbjct: 487 NALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMET 546

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
             R+ P  +HY+ ++D L R+G+  EA+++IES+P KP+  IW+ LLS CRVHG++ELG 
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGI 606

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              + L  L  ++   Y+++SN++A  G W E  R+RKL R +G+KK    SW+E++ ++
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEK 625
           H F   D +HP  E +++ L ++ K M+  LG+V    + LHD++ +  KE+ L  HSEK
Sbjct: 667 HTFLVDDTSHPEAEAVYKYLQDLGKEMR-RLGYVPDTSFVLHDVESDGHKEDMLTTHSEK 725

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           +A+   L++      PG  IR+FKNLR CGDCH F + LSK+++   ++RD  RFH F  
Sbjct: 726 IAVAFGLMK----LPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRN 781

Query: 686 GVCSCGDYW 694
           G CSCG++W
Sbjct: 782 GECSCGNFW 790


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/667 (34%), Positives = 377/667 (56%), Gaps = 36/667 (5%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G  +H  + K+G   +  +   LID Y+ CG ++ A  VFD +L +++VSWT ++  F
Sbjct: 156 ELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCF 215

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            +N   K  L LF QM     KPN FT ++  KA   L + + G  +HG  +KS +E + 
Sbjct: 216 AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDL 275

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG +++D+Y+K G I++A   F+ +P K +I W+ MIA Y  +  S + + +F +M++ 
Sbjct: 276 YVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQA 335

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             +P++FTF S L+AC ++  +  G QIH  +I  G    V   ++ +L+D Y KCG + 
Sbjct: 336 LVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV--FVSNALMDVYAKCGRME 393

Query: 269 EARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +  +F +   +  V  W+++I+G+ Q  +  +A+ LF  + E  +Q      SS +   
Sbjct: 394 NSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 453

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A  A +E G QIH+   K     D  V+N+++DMY KCG I +A  +F+ M  ++ V+W 
Sbjct: 454 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 513

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I+GY  HGL                            AC+++GL+++ Q YF+ +  D
Sbjct: 514 AMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSMIQD 545

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             ++P IEHY+C+V  LGR G LD+A  LI+ +P +PS+ +W+ LL AC +H D+ELGR 
Sbjct: 546 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 605

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + +L ++  +   +V++SN++A A  W+    +RK  + KG+KK  G SW+E    +H
Sbjct: 606 SAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVH 665

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F  GD +HP    I+ +L  +  + K+  G++      L D+++E KE  L VHSE+LA
Sbjct: 666 SFTVGDTSHPEVRVINGMLEWLHMKTKKA-GYIPNYNVVLLDVEDEEKERLLWVHSERLA 724

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +   ++R       G  IR+ KNLR+C DCH  IK +SK+++   VVRD  RFH F+ G+
Sbjct: 725 LSFGIIR----TPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGL 780

Query: 688 CSCGDYW 694
           CSCGDYW
Sbjct: 781 CSCGDYW 787



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 246/486 (50%), Gaps = 5/486 (1%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A++L+ C +      G  LH  ++K G   DL   N L++MY K   +  A  +FD+M E
Sbjct: 42  ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           RN +S+  L+ G+ ++      + LF ++     + N F  +T +K    +   E G  I
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGI 161

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H    K G E N  VG ++ID YS CGR++ A  +FD +  K +++W  M+  +      
Sbjct: 162 HACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCF 221

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + L LF +M+  G  P+ FTF S  KAC  L +   G  +HG  + S   Y +   +  
Sbjct: 222 KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKS--RYELDLYVGV 279

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y K G + +AR  F+ I +K VI WS +I  YAQ +   EA+E+F Q+R+  +  
Sbjct: 280 ALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           + F  +S++   A    +  G QIH +  K+    D  VSN+++D+Y KCG ++ +  LF
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLF 399

Query: 376 NEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
            E P +N VT W  +I G+ + G  ++A+ LF  ML   V+   V Y + L AC+    +
Sbjct: 400 AESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 459

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           E   +  S L         I   + ++D   + G + +A+ + + M  +  ++ W  ++S
Sbjct: 460 EPGLQIHS-LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVS-WNAMIS 517

Query: 495 ACRVHG 500
              +HG
Sbjct: 518 GYSMHG 523



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 28/192 (14%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +N + + + +     + +LR C+    L+ G+Q+H   VK  F  D+++ N LIDMYAKC
Sbjct: 432 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC 491

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VFD M +++ VSW A++ G+  +G A A   L  Q         +   ++ I
Sbjct: 492 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQ--------GQAYFTSMI 543

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SL 179
           +  G+   +E     H  CM              + +  + G +++A ++ D +P + S+
Sbjct: 544 QDHGIEPCIE-----HYTCM--------------VWLLGRGGHLDKAVKLIDEIPFQPSV 584

Query: 180 ITWNAMIAGYVL 191
           + W A++   V+
Sbjct: 585 MVWRALLGACVI 596


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/667 (35%), Positives = 374/667 (56%), Gaps = 12/667 (1%)

Query: 33  QLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           QLH   +++G    ++  +  L+  Y + G +  A  VFD+M ER+V +W A++ G  +N
Sbjct: 87  QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
             A   ++L  +M    V  +  TLS+ +    VL      + +H   +K G      V 
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++ID+Y K G + EA  +F  M  + L+TWN++I+     G     + LF  M E G  
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVC 266

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLVEA 270
           PD  T  S   A    G   G   +H ++   G  + V  +IAG ++VD Y K   +  A
Sbjct: 267 PDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG--WDVGDIIAGNAMVDMYAKMSKIDAA 324

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFAD 329
           ++VFD +  + V+SW++LI GY Q     EA+ ++  +     L+       S++  ++ 
Sbjct: 325 QKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSY 384

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++QG ++HA + K    LD  V+  ++D+Y KCG + EA  LF  MP ++   W  I
Sbjct: 385 LGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAI 444

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I G G HG   +A+ LF +M  ++++PD V ++++L+ACSH+GLV++ + +F  +     
Sbjct: 445 IAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYG 504

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P  +HY+C+VD LGRAG+LDEA   I+SMP+KP  A+W  LL ACR+HG++E+G+   
Sbjct: 505 IVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVAS 564

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + L  LD +N   YV+MSN++A  G W+  + +R L R + L+K  G S +EV   +  F
Sbjct: 565 QNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVF 624

Query: 570 YGGDDT--HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
           Y G  T  HP  E+I + L ++  +MK   G+V    + L D++E+ KE+ L  HSE+LA
Sbjct: 625 YSGTQTEPHPQHEEIQRGLHDLLAKMKSA-GYVPDYSFVLQDVEEDEKEQILNNHSERLA 683

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   ++    N  PG  + ++KNLRVCGDCH   K +SKI +   +VRDA RFH F+ G 
Sbjct: 684 IAFGII----NTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGH 739

Query: 688 CSCGDYW 694
           CSCGD+W
Sbjct: 740 CSCGDFW 746



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 4/174 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G+++H   +K G + D+ +   LID+YAKCG++  A  +F+ M  R+   W A++ G
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              +G+    LSLF QM    +KP+  T  + + A      V+ G     + M++ +   
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDL-MQTVYGIV 506

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSDKG 198
           P+  +   ++DM  + G+++EA      MP K     W A++    + G  + G
Sbjct: 507 PIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMG 560


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/707 (35%), Positives = 387/707 (54%), Gaps = 61/707 (8%)

Query: 28  LDYGVQLHGALVKMGFS-----FDLMLNNDLIDM------YAKCGEMNGACAVFDKMLER 76
           + Y   + G L    FS     FD M   DL         Y +   +  A  +FD M ++
Sbjct: 78  VSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK 137

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS-VENG-MQ 134
           +VVSW A++ G+ QNG       +F +M      P+  ++S N    G+L++ V NG ++
Sbjct: 138 DVVSWNAMLSGYAQNGFVDEAREVFNKM------PHRNSISWN----GLLAAYVHNGRLK 187

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
                 +S   W  +  N ++  Y K   + +A ++FD MP + +I+WN MI+GY   G 
Sbjct: 188 EARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGD 247

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG----------TQIHGFLITSG 244
             +   LF +      I D FT+T+ +      G V              +I    + +G
Sbjct: 248 LSQAKRLFNE----SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAG 303

Query: 245 FPYSVKTVIAGSLVDF---------------YVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +    K VIAG L +                Y + G + +AR++FD++ Q+  +SW+++I
Sbjct: 304 YVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAII 363

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GYAQ  +  EA+ +F +++      +    S  +   AD A +E GKQ+H    K  +G
Sbjct: 364 SGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK--AG 421

Query: 350 LDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
            +T   V N+++ MY KCG  DEA ++F  +  K+VV+W  +I GY +HG  ++A+ LF 
Sbjct: 422 FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFE 481

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
            M    V+PD +  + VLSACSHSGL++   EYF  +  D  +KP  +HY+C++D LGRA
Sbjct: 482 SMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRA 541

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           GRL+EA+NL+ +MP  P  A W  LL A R+HG+ ELG +  E++ +++  N   YV++S
Sbjct: 542 GRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLS 601

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           N++A +G W +  ++R   R  G++KV G SWVEV  +IH F  GD  HP  ++I+  L 
Sbjct: 602 NLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLE 661

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           E++ +M+ E G+V   K  LHD++EE KE  L+ HSEKLA+   +    L    G+ IRV
Sbjct: 662 ELDLKMRRE-GYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGI----LTIPAGRPIRV 716

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLRVC DCH  IK +SKI+  + ++RD+ RFH F  G+CSCGDYW
Sbjct: 717 MKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 37/408 (9%)

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           K  + ++V+W   +   ++NG+  + L +F  M      P   ++S N   SG L + + 
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSM------PRRSSVSYNAMISGYLRNAKF 93

Query: 132 GMQ---IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
            +       M  +  F W     N ++  Y +  R+ EA ++FD+MP K +++WNAM++G
Sbjct: 94  SLARDLFDKMPERDLFSW-----NVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSG 148

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G+ D+   +F KM     I    ++   L A    G +    ++  F   S +   
Sbjct: 149 YAQNGFVDEAREVFNKMPHRNSI----SWNGLLAAYVHNGRLKEARRL--FESQSNW--- 199

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            + +    L+  YVK   L +AR++FD +  + VISW+++I GYAQ  +L++A  LF + 
Sbjct: 200 -ELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNES 258

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
             R    D F  ++M+  +    +V++ ++   Y  ++P   + S  N+++  Y++   +
Sbjct: 259 PIR----DVFTWTAMVSGYVQNGMVDEARK---YFDEMPVKNEISY-NAMLAGYVQYKKM 310

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A ELF  MP +N+ +W  +ITGYG++G   +A  LF  M     + D V++ A++S  
Sbjct: 311 VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMM----PQRDCVSWAAIISGY 366

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + +G  EE+   F  +  D     R   +SC + +      L+  K +
Sbjct: 367 AQNGHYEEALNMFVEMKRDGESSNR-STFSCALSTCADIAALELGKQV 413



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 177/368 (48%), Gaps = 59/368 (16%)

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           V  N  I  + + G  + A R+F+ MP +S +++NAMI+GY+          LF KM E 
Sbjct: 47  VTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPER 106

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               D F++   L                                       YV+   L 
Sbjct: 107 ----DLFSWNVMLTG-------------------------------------YVRNRRLG 125

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA ++FDL+ +K V+SW++++ GYAQ   + EA E+F ++  R    +    + ++  + 
Sbjct: 126 EAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYV 181

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               +++ +++     +  S  +    N ++  Y+K  ++ +A +LF+ MPV++V++W  
Sbjct: 182 HNGRLKEARRLF----ESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNT 237

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+GY + G   +A  LF +  + DV      + A++S    +G+V+E+++YF  +    
Sbjct: 238 MISGYAQVGDLSQAKRLFNESPIRDV----FTWTAMVSGYVQNGMVDEARKYFDEMP--- 290

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            +K  I  Y+ ++    +  ++  A  L E+MP + +I+ W T+++    +G +   R++
Sbjct: 291 -VKNEIS-YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMITGYGQNGGIAQARKL 347

Query: 509 GEILLRLD 516
            +++ + D
Sbjct: 348 FDMMPQRD 355



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S R   + +L  C+    L+ G Q+HG +VK GF     + N L+ MY KCG  + A  V
Sbjct: 389 SNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDV 448

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F+ + E++VVSW  ++ G+ ++G  +  L LF  M  + VKP+E T+   + A      +
Sbjct: 449 FEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLI 508

Query: 130 ENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMI 186
           + G + +   M   +   P   +   +ID+  + GR+ EA  +   MP      +W A++
Sbjct: 509 DRGTE-YFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567

Query: 187 AGYVLAGYSDKG 198
               + G ++ G
Sbjct: 568 GASRIHGNTELG 579


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/675 (34%), Positives = 385/675 (57%), Gaps = 12/675 (1%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +KNL     +  H  +       +++  N LI++YAKC ++  A  +FD M +RNVVSW 
Sbjct: 38  TKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWG 97

Query: 83  ALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ALM G+  NG     L LF  M S   ++PNE+  +T I +      V  G Q HG  +K
Sbjct: 98  ALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALK 157

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           SG  ++  V N++I MYS+   +  A  ++  +P   + ++N +I G +  GY  + L +
Sbjct: 158 SGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEV 217

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
             +M +   + D  T+ +    C  L  +  G Q+H  +  +G  Y   + ++ +++D Y
Sbjct: 218 LDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYD--SFVSSAIIDMY 275

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCG ++ AR+VF+ ++ K+V+SW++++  Y+Q     EA+  F ++    L  + +  +
Sbjct: 276 GKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFA 335

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMP 379
            ++   A  + +  GK +H    K  SG +    V N++++MY K G I+ A ++F EM 
Sbjct: 336 VLLNSCAGISALGHGKLLHTRIKK--SGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMI 393

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++ +TW+ +I G   HGL +EA+ +F++ML     P  V ++ VLSAC+H G V+E   
Sbjct: 394 CRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFY 453

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           Y ++L     ++P +EHY+CIV  L +AGRLDEA+N ++S PVK  +  W+TLLSAC VH
Sbjct: 454 YLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVH 513

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            +  LG++V E++L++D  +   Y+++SN++A A  W+   ++RKL R + +KK  G SW
Sbjct: 514 QNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASW 573

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           +E+   IH F     THP + +I++ + E+   M   +G+V  +    HD+++E K E +
Sbjct: 574 IEIRNSIHVFVSEGKTHPESNQIYEKVQELLT-MIRPMGYVPDIAAVFHDVEDEQKREYV 632

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLAI   L++       G  IRV KNLR+C DCH  +K +SK+   + +VRDA R
Sbjct: 633 SYHSEKLAIAYGLMK----TPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANR 688

Query: 680 FHRFEGGVCSCGDYW 694
           FH F  G CSC DYW
Sbjct: 689 FHCFGDGGCSCADYW 703



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 200/406 (49%), Gaps = 9/406 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  +  CS +  +  G Q HG  +K G  F   + N LI MY++  ++ GA +V+ ++ 
Sbjct: 132 FATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP 191

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             +V S+  ++ G L+NG     L +  +M    +  +  T  T       L  +  G+Q
Sbjct: 192 GLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQ 251

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    ++G E++  V ++IIDMY KCG I  A ++F+ +  K++++W A++A Y   G 
Sbjct: 252 VHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGC 311

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L  F +M+  G +P+E+TF   L +C  + ++G G  +H  +  SGF   +  ++ 
Sbjct: 312 FEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHI--IVG 369

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L++ Y K G +  A +VF  +  +  I+WS++I G +      EA+ +F+++      
Sbjct: 370 NALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKEC 429

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
                   ++   A    V++G        K  +G++  V +   IV +  K G +DEA 
Sbjct: 430 PHYVTFVGVLSACAHLGSVQEGFYYLNQLMK-QTGIEPGVEHYTCIVGLLCKAGRLDEAE 488

Query: 373 ELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDV 414
                 PVK +VV W  +++    +  +GL K+   L  +M   DV
Sbjct: 489 NFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDV 534



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 140/295 (47%), Gaps = 8/295 (2%)

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P E T    LK      ++  G  IH  LI +        V   SL++ Y KC  ++ AR
Sbjct: 24  PLEHTI-QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVAR 82

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADF 330
            +FD + +++V+SW +L+ GY     + E + LF+ +     ++ + ++ ++++   +D 
Sbjct: 83  ILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDS 142

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             V +G Q H YA K        V N+++ MY +   +  A  ++ E+P  +V ++ +II
Sbjct: 143 GQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIII 202

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G  ++G   EA+ +  +M+ + +  D V Y+     CSH   +++ +      C   R 
Sbjct: 203 NGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH---LKDLRLGLQVHCRMFRT 259

Query: 451 KPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
               + +  S I+D  G+ G +  A+ +   +  K ++  W  +L+A   +G  E
Sbjct: 260 GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTK-NVVSWTAILAAYSQNGCFE 313



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 2/183 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+      A  L  C+    L +G  LH  + K GF   +++ N LI+MY+K G +  A 
Sbjct: 327 LLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAH 386

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF +M+ R+ ++W+A++CG   +G  +  L +F +M ++   P+  T    + A   L 
Sbjct: 387 KVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLG 446

Query: 128 SVENGMQIHGMCMK-SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAM 185
           SV+ G       MK +G E        I+ +  K GR++EA       P K  ++ W  +
Sbjct: 447 SVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTL 506

Query: 186 IAG 188
           ++ 
Sbjct: 507 LSA 509


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/670 (35%), Positives = 384/670 (57%), Gaps = 13/670 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++D G  +H   +K G    + + N L++MYAKCG +  A  VF +M  R++VSW  LM 
Sbjct: 172 MVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMA 231

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G + NG     L LF    SS     E T ST I     L  +    Q+H   +K GF  
Sbjct: 232 GLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHS 291

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
              V  +++D Y+K G++++A  +F +M  ++++++W AMI G +  G       LF +M
Sbjct: 292 YGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM 351

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +E G  P++ T+++ L    ++       QIH  +I +   Y     +  +L+  Y K  
Sbjct: 352 REDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTN--YECTPTVGTALMVSYSKLC 405

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
              EA  +F +I+QK V+SWS+++  YAQ  +   A   F ++    L+ + F +SS + 
Sbjct: 406 STEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAID 465

Query: 326 VFADFAL-VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             A  A  V+ G+Q HA + K        VS+++V MY + G I+ A  +F     ++++
Sbjct: 466 ACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLL 525

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +++GY +HG +++A+ +FR+M ++ ++ DG+ +L+V+  C+H+GLVEE Q+YF  +
Sbjct: 526 SWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLM 585

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D  + P ++HY+C+VD   RAG+LDE  +LIE MP      IW+ LL ACRVH ++EL
Sbjct: 586 VRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVEL 645

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G+   E LL L+  +   YV++SNI++ AG W E + +RKL  +K ++K AG SW+++  
Sbjct: 646 GKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKN 705

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
           ++HFF   D +HPL+E+I+  L  M  ++K+E G+     +  HD+ E+ KE  L +HSE
Sbjct: 706 KVHFFIASDKSHPLSEQIYAKLRAMTAKLKQE-GYCPDTSFVPHDVAEDQKEAMLAMHSE 764

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LA+   L+       P   + +FKNLRV GD H  +K +S+I     V+RD  RFH F+
Sbjct: 765 RLALAFGLI----ATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFK 820

Query: 685 GGVCSCGDYW 694
            GVCSCGD+W
Sbjct: 821 SGVCSCGDFW 830



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 234/473 (49%), Gaps = 11/473 (2%)

Query: 31  GVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   V+ G    D+ +   L+DMY     +     VF+ ML+RNVV+WT+L+ G++
Sbjct: 74  GKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYI 133

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q G     +SLF +M +  V PN FT S+ +        V+ G  +H   +K G      
Sbjct: 134 QAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVF 193

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+++MY+KCG + EA  +F  M  + +++WN ++AG VL G   + L LF   +   
Sbjct: 194 VCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSI 253

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            +  E T+++ +  C +L  +G   Q+H  ++  GF +S   V+  +L+D Y K G L +
Sbjct: 254 TMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGF-HSYGNVMT-ALMDAYNKAGQLDK 311

Query: 270 ARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF- 327
           A  VF L+   ++V+SW+++I G  Q  ++  A  LF ++RE  +  +    S+++ V  
Sbjct: 312 ALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSE 371

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A F       QIHA   K       +V  +++  Y K    +EA  +F  +  K+VV+W+
Sbjct: 372 ASFP-----PQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWS 426

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++T Y + G    A   F KM +  ++P+     + + AC+      +    F  +   
Sbjct: 427 AMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIK 486

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            R    +   S +V    R G ++ A+ + E    +  ++ W ++LS    HG
Sbjct: 487 HRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS-WNSMLSGYAQHG 538



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 227/456 (49%), Gaps = 17/456 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           +R S ++++E    +  +  C+    L    QLH +++K GF     +   L+D Y K G
Sbjct: 249 SRSSITMLTE-STYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAG 307

Query: 62  EMNGACAVFDKML-ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           +++ A  VF  M   +NVVSWTA++ G +QNG+     +LF +M    V PN+ T ST +
Sbjct: 308 QLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL 367

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
                +S      QIH   +K+ +E  P VG +++  YSK     EA  +F ++  K ++
Sbjct: 368 ----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVV 423

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGF 239
           +W+AM+  Y  AG  +     F KM  HG  P+EFT +S + AC S  + V  G Q H  
Sbjct: 424 SWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAI 483

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            I      ++   ++ +LV  Y + G +  A+ VF+    + ++SW+S++ GYAQ     
Sbjct: 484 SIKHRCHDAL--CVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQ 541

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           +A+++FRQ+    + +DG    S++   A   LVE+G+Q      +   G+  ++ +   
Sbjct: 542 KALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVR-DYGITPTMDHYAC 600

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +VD+Y + G +DE   L   MP     T W  ++     H   +       K+L   +EP
Sbjct: 601 MVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLL--SLEP 658

Query: 417 -DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            D   Y+ + +  S +G  +E  E   +L + K+++
Sbjct: 659 LDSATYVLLSNIYSAAGKWKEKDE-VRKLMDTKKVR 693



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 206/427 (48%), Gaps = 34/427 (7%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKS 178
           IK  G +     G Q+H +C++ G +   + VG S++DMY     + +  ++F+ M  ++
Sbjct: 62  IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRN 121

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++TW +++ GY+ AG     + LF +M+  G  P+ FTF+S L    S G V  G  +H 
Sbjct: 122 VVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHA 181

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
             I  G   +V   +  SL++ Y KCG + EAR VF  +E + ++SW++L+ G       
Sbjct: 182 QSIKFGCCSTV--FVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRD 239

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA++LF   R     +     S+++ + A+   +   +Q+H+   K       +V  ++
Sbjct: 240 LEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTAL 299

Query: 359 VDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +D Y K G +D+A ++F  M   +NVV+WT +I G  ++G    A  LF +M  D V P+
Sbjct: 300 MDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPN 359

Query: 418 GVAYLAVLSACS-------HSGLVEESQE-----------YFSRLCNDKRM--------K 451
            + Y  +L+          H+ +++ + E            +S+LC+ +          +
Sbjct: 360 DLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQ 419

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSAC-RVHGDLELGRE 507
             +  +S ++    +AG  + A N    M    +KP+     + + AC      ++LGR+
Sbjct: 420 KDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQ 479

Query: 508 VGEILLR 514
              I ++
Sbjct: 480 FHAISIK 486


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/738 (35%), Positives = 396/738 (53%), Gaps = 62/738 (8%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M + S++L S RQ     L+ C  N  L  G  LH   +K        L+N  I +Y+KC
Sbjct: 1   MTQFSWTLQSFRQ----ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKC 56

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQ------------------------------ 90
             +  A   F++  E NV S+ AL+  + +                              
Sbjct: 57  NLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYA 116

Query: 91  -NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM----QIHGMCMKSGFE 145
             G+  + LSLF +M    +  + FT S      GV+++  N +    Q+H +   SGF+
Sbjct: 117 DRGDTLSALSLFGEMREMGLVMDGFTFS------GVITACCNHVGLIRQLHSLAFSSGFD 170

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
               V NS++  YSK G + EA  +F+ M    +  ++WN+MI  Y       K L L+R
Sbjct: 171 SYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYR 230

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            M   G   D FT  S L     +  + GG Q H   I +GF  +    +   L+D Y K
Sbjct: 231 DMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGF--NKNRHVGSGLIDMYAK 288

Query: 264 CGC-LVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLS 321
           CG  + E+R+VF+ I    ++ W+++I GY+Q + L+ EA+E FRQ++      D     
Sbjct: 289 CGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFV 348

Query: 322 SMMGVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
             +   ++ +   QGKQ HA A K  +PS    SV+N++V MY KCG + +A +LF  MP
Sbjct: 349 CAISACSNLSSPSQGKQFHALAMKSEIPSN-QISVNNALVTMYSKCGNLQDARKLFQRMP 407

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             N VT   II GY +HG+  E++ LF +ML   + P  +  +++LSAC+H+G VEE ++
Sbjct: 408 QHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK 467

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF+ + +   ++P  EHYSC++D LGRAG+L EA+ LI++MP  P  A W  LL ACR +
Sbjct: 468 YFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKY 527

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
           G++EL  +     L+L+  N V Y+M++++++ A  W E  R+RKL R +G++K  G SW
Sbjct: 528 GNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSW 587

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL---HDIQEESKE 616
           +E++K +H F   D++HP  ++IH  L EM  +MK   G+V  V++A     +  E+ KE
Sbjct: 588 IELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRA-GYVPDVRWAFVKDDETGEQEKE 646

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+   L    L  + G+ + V KNLR+CGDCH  IK +S I +    VRD
Sbjct: 647 IMLAHHSEKLAVAFGL----LFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRD 702

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH FE G CSCGDYW
Sbjct: 703 AYRFHCFEDGRCSCGDYW 720


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/627 (37%), Positives = 355/627 (56%), Gaps = 53/627 (8%)

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
           SLF  +  S +  N  +L               G Q+H + + SG   +  + N ++++Y
Sbjct: 53  SLFSHLLQSCISENSLSL---------------GKQLHSLIITSGCSSDKFISNHLLNLY 97

Query: 159 SKCGRINEAA-------------------------------RMFDVMPAKSLITWNAMIA 187
           SKCG+++ A                                +MFD MP +++ TWNAM+A
Sbjct: 98  SKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVA 157

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G +   ++++GL LF +M E G +PDEF   S L+ C  L ++  G Q+HG++   GF +
Sbjct: 158 GLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEF 217

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           ++  V+  SL   Y+KCG L E  R+   +  ++V++W++LI G AQ     E ++ +  
Sbjct: 218 NL--VVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNM 275

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           ++    + D     S++   ++ A + QG+QIHA   K  + L  SV +S++ MY +CG 
Sbjct: 276 MKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGC 335

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           ++ + ++F E    +VV W+ +I  YG HG   EA+ LF +M  + +E + V +L++L A
Sbjct: 336 LEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH GL E+  ++F  +     +KPR+EHY+C+VD LGR G ++EA+ LI SMPVK  + 
Sbjct: 396 CSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVI 455

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W+TLLSAC++H   E+ R + E + RLD  +PV YV++SNIHA    W++   +RK  R
Sbjct: 456 TWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMR 515

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            + LKK  G SW+EV  +IH F  GD +HP + +I   L E+   MK+  G+V  +   L
Sbjct: 516 DRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKR-GYVPDIDSVL 574

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD+  E KE SL  HSEKLAI  AL    L    G  IRV KNLRVC DCH  IK +S+I
Sbjct: 575 HDMDVEDKEYSLVHHSEKLAIAFAL----LYTPVGTPIRVIKNLRVCSDCHVAIKYISEI 630

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD++RFH F+ G CSCGDYW
Sbjct: 631 SNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 222/461 (48%), Gaps = 36/461 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
            +R S  + SE    +  L+ C     L  G QLH  ++  G S D  ++N L+++Y+KC
Sbjct: 41  FDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKC 100

Query: 61  GEMNGACAVF-------------------------------DKMLERNVVSWTALMCGFL 89
           G+++ A  +F                               D+M ERNV +W A++ G +
Sbjct: 101 GQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLI 160

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q    +  L LF +M      P+EF L + ++    L ++  G Q+HG   K GFE+N V
Sbjct: 161 QFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLV 220

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V +S+  MY KCG + E  R+   MP+++++ WN +IAG    GY ++ L  +  M+  G
Sbjct: 221 VVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAG 280

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+ TF S + +C  L ++G G QIH  +I +G   S+   +  SL+  Y +CGCL  
Sbjct: 281 FRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG--ASLIVSVISSLISMYSRCGCLEY 338

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + +VF   E   V+ WSS+I  Y       EA++LF Q+ +  L+ +     S++   + 
Sbjct: 339 SLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSH 398

Query: 330 FALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
             L E+G K       K            +VD+  + G ++EA  L   MPVK +V+TW 
Sbjct: 399 CGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWK 458

Query: 388 VIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSA 427
            +++    H   + A  +  ++  LD  +P     L+ + A
Sbjct: 459 TLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHA 499


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/678 (35%), Positives = 386/678 (56%), Gaps = 26/678 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C + L L  G ++HG L+K+GF  D+ + N LIDMY K G +  A  VFD+M  R++
Sbjct: 131 IKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDL 190

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+  +G+  + L  F +M     K + F + + + A  +   + +GM+IH  
Sbjct: 191 VSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQ 250

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++S  E + +V  S+IDMY KCG+++ A R+F+ + +K+++ WNAMI G          
Sbjct: 251 VIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG---------- 300

Query: 199 LLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGS 256
                 MQE  + IPD  T  + L +C   G++  G  IHGF I   F PY    V+  +
Sbjct: 301 ------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY---LVLETA 351

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y KCG L  A  VF+ + +K+++SW++++  Y Q E   EA+++F+ +    L+ D
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPD 411

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              ++S++   A+ A   +GKQIH+Y  K+  G +T +SN+IV MY KCG +  A E F+
Sbjct: 412 AITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFD 471

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+VV+W  +I  Y  HG  + ++  F +M     +P+G  ++++L+ACS SGL++E
Sbjct: 472 GMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDE 531

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              +F+ +  +  + P IEHY C++D LGR G LDEAK  IE MP+ P+  IW +LL+A 
Sbjct: 532 GWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAAS 591

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R H D+ L       +L L  DN   YV++SN++A+AG W + +R++ L + +GL K  G
Sbjct: 592 RNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVG 651

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S V+++     F   D +H  T  I+ VL  + K++ E++      K+   D+ ++ + 
Sbjct: 652 CSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKK-RG 710

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            S   HS KLAI   L+   +    G  + V KN R+C DCH   K +S++ K   VV D
Sbjct: 711 NSPEYHSVKLAICFGLISTAI----GNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGD 766

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A  FH F  G CSC DYW
Sbjct: 767 AKVFHHFRDGCCSCRDYW 784



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 230/459 (50%), Gaps = 28/459 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL +  DL   + + G M  A  +F+KM   +   W  ++ G+  NG  +  +  + +M 
Sbjct: 58  DLNITRDLCG-FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME 116

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              ++ + FT    IKA G L ++  G ++HG  +K GF+ +  V N +IDMY K G I 
Sbjct: 117 CEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIE 176

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A ++FD MP + L++WN+M++GY + G     L+ F++M   G   D F   S L AC 
Sbjct: 177 LAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACS 236

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
               +  G +IH  +I S     +  ++  SL+D Y KCG +  A RVF+ I  K++++W
Sbjct: 237 IEHCLRSGMEIHCQVIRSELELDI--MVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAW 294

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I G  +++ +                 D   + +++   +    + +GK IH +A +
Sbjct: 295 NAMIGGMQEDDKVIP---------------DVITMINLLPSCSQSGALLEGKSIHGFAIR 339

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                   +  ++VDMY KCG +  A  +FN+M  KN+V+W  ++  Y ++   KEA+ +
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL- 464
           F+ +L + ++PD +   +VL A +      E ++  S +     MK  +   + I +++ 
Sbjct: 400 FQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYI-----MKLGLGSNTFISNAIV 454

Query: 465 ---GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
               + G L  A+   + M  K  ++ W T++ A  +HG
Sbjct: 455 YMYAKCGDLQTAREFFDGMVCKDVVS-WNTMIMAYAIHG 492



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 191/390 (48%), Gaps = 21/390 (5%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++R  +  +L  CS    L  G+++H  +++     D+M+   LIDMY KCG+++ A  V
Sbjct: 223 ADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERV 282

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F+++  +N+V+W A++ G  ++                 V P+  T+   + +     ++
Sbjct: 283 FNRIYSKNIVAWNAMIGGMQED---------------DKVIPDVITMINLLPSCSQSGAL 327

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G  IHG  ++  F    V+  +++DMY KCG +  A  +F+ M  K++++WN M+A Y
Sbjct: 328 LEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAY 387

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V      + L +F+ +      PD  T  S L A   L S   G QIH +++  G     
Sbjct: 388 VQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGL--GS 445

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
            T I+ ++V  Y KCG L  AR  FD +  K V+SW+++I+ YA       +++ F ++R
Sbjct: 446 NTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMR 505

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGL 367
            +  + +G    S++   +   L+++G      + KV  G+D  + +   ++D+  + G 
Sbjct: 506 GKGFKPNGSTFVSLLTACSISGLIDEGWGFFN-SMKVEYGIDPGIEHYGCMLDLLGRNGN 564

Query: 368 IDEATELFNEMP-VKNVVTWTVIITGYGKH 396
           +DEA     EMP V     W  ++     H
Sbjct: 565 LDEAKCFIEEMPLVPTARIWGSLLAASRNH 594


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 367/630 (58%), Gaps = 29/630 (4%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FDK+ +R+V+SW +++ G++ NG  +  L ++ QM    +  +  T+ + +     
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++  G  +H + +KS FE      N+++DMYSKCG ++ A R+F+ M  +++++W +M
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAGY   G SD  + L ++M++ G   D    TS L AC   GS+  G  +H ++  +  
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +L+D Y KCG +  A  VF  +  K +ISW+++I                
Sbjct: 384 ESNL--FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------- 425

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  L+ D   ++ ++   A  + +E+GK+IH Y  +     D  V+N++VD+Y+KC
Sbjct: 426 -----GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G++  A  LF+ +P K++V+WTV+I GYG HG   EA+  F +M    +EPD V+++++L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSHSGL+E+   +F  + ND  ++P++EHY+C+VD L R G L +A   IE++P+ P 
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPD 600

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW  LL  CR + D+EL  +V E +  L+ +N   YV+++NI+A+A  W E +RLR+ 
Sbjct: 601 ATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREK 660

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
              +GL+K  G SW+E+  +++ F  G++ +HP ++ I  +L +M ++MKEE G     K
Sbjct: 661 IGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEE-GHFPKTK 719

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           YAL +  E  KE +L  HSEKLA+   L    L   P K IRV KNLRVCGDCHE  K +
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGL----LTLPPRKTIRVTKNLRVCGDCHEMAKFM 775

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK  +   V+RD  RFH F+ G CSC  +W
Sbjct: 776 SKETRREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 210/409 (51%), Gaps = 31/409 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ +  L  G  +H   +K  F   +  +N L+DMY+KCG+++GA  VF+KM ERNVVSW
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ ++G +   + L  QM    VK +   +++ + A     S++NG  +H     
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +  E N  V N+++DMY+KCG +  A  +F  M  K +I+WN MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------------- 425

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
                  GE+ PD  T    L AC SL ++  G +IHG+++ +G  YS    +A +LVD 
Sbjct: 426 -------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNG--YSSDRHVANALVDL 476

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           YVKCG L  AR +FD+I  K ++SW+ +I GY       EA+  F ++R+  ++ D    
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++   +   L+EQG +   Y  K    ++  + +   +VD+  + G + +A E    +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P+  +   W  ++ G   +   + A  +  ++   ++EP+   Y  +L+
Sbjct: 596 PIAPDATIWGALLCGCRNYHDIELAEKVAERVF--ELEPENSGYYVLLA 642



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 220/490 (44%), Gaps = 75/490 (15%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           E +  +  L+ C+       G ++H  +       D  L   L+  YA CG++     VF
Sbjct: 98  ETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVF 157

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D M ++NV  W  ++  + + G+ K  + LF  M                        VE
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM------------------------VE 193

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  I G   +S FE                        +FD +  + +I+WN+MI+GYV
Sbjct: 194 KG--IEGKRPESAFE------------------------LFDKLCDRDVISWNSMISGYV 227

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G +++GL ++++M   G   D  T  S L  C + G++  G  +H   I S F   + 
Sbjct: 228 SNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRIN 287

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              + +L+D Y KCG L  A RVF+ + +++V+SW+S+I GY ++     A++L +Q+ +
Sbjct: 288 --FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK 345

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +++D   ++S++   A    ++ GK +H Y        +  V N+++DMY KCG ++ 
Sbjct: 346 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEA 405

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+ M VK++++W  +I                      +++PD      VL AC+ 
Sbjct: 406 ANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPACAS 444

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              +E  +E    +  +     R    + +VD   + G L  A+ L + +P K  ++ W 
Sbjct: 445 LSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSKDLVS-WT 502

Query: 491 TLLSACRVHG 500
            +++   +HG
Sbjct: 503 VMIAGYGMHG 512



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 154/302 (50%), Gaps = 33/302 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  LD G  +H  +       +L + N L+DMYAKCG M  A +VF  M+ +++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  ++                       +KP+  T++  + A   LS++E G +IHG 
Sbjct: 419 ISWNTMI---------------------GELKPDSRTMACVLPACASLSALERGKEIHGY 457

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V N+++D+Y KCG +  A  +FD++P+K L++W  MIAGY + GY ++ 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M++ G  PDE +F S L AC   G +  G +   +++ + F    K      +V
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMV 576

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVIS----WSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           D   + G L +A   ++ IE   +      W +L+ G     ++    EL  ++ ER  +
Sbjct: 577 DLLSRTGNLSKA---YEFIETLPIAPDATIWGALLCGCRNYHDI----ELAEKVAERVFE 629

Query: 315 VD 316
           ++
Sbjct: 630 LE 631



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 98/184 (53%), Gaps = 4/184 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  + + +A  L  C+    L+ G ++HG +++ G+S D  + N L+D+Y KCG +  A 
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD +  +++VSWT ++ G+  +G     ++ F +M  + ++P+E +  + + A     
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
            +E G +   + MK+ F   P + +   ++D+ S+ G +++A    + +P A     W A
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 185 MIAG 188
           ++ G
Sbjct: 607 LLCG 610


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/698 (35%), Positives = 386/698 (55%), Gaps = 43/698 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           QLH  +++ G  FD      L    A      ++ AC VFD++   N+ +W  L+  F  
Sbjct: 48  QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107

Query: 91  NGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +      L +F QM   S + PN +T    IKA+  +SS+  G  IHGM MK+ F  +  
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLF 167

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + NS+I  YS  G ++ A  +F  +  K +++WN+MI+G+V  G  ++ L LF++M+   
Sbjct: 168 ISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMEN 227

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+  T    L AC     +  G     ++  +G    +  +++ +++D YVKCG L +
Sbjct: 228 ARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGI--DINLILSNAMLDMYVKCGSLED 285

Query: 270 ARRVFDLIEQKSVISWSSLILGYA-------------------------------QEENL 298
           ARR+FD +E+K ++SW+++I GYA                               Q    
Sbjct: 286 ARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKP 345

Query: 299 AEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA+ +FR+L+  ++ + +   L+S +   A    ++ G  IH Y  K    L+  ++ S
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTS 405

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG +++A E+F  +  ++V  W+ +I G   HG  + A+ LF KM    V+P+
Sbjct: 406 LIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPN 465

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            V +  +L ACSHSGLV+E + +F+++     + P  +HY+C+VD LGRAG L+EA  LI
Sbjct: 466 AVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELI 525

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           E MP+ PS ++W  LL ACR++G++EL       LL  D +N   YV++SNI+A AG W+
Sbjct: 526 EKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWD 585

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
              RLR+  +  GL+K  G S +EV+  IH F  GD++HPL+ +I+  L E+  R+K   
Sbjct: 586 CVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKST- 644

Query: 598 GFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           G+V    + L  ++EE  KE +L +HSEKLAI   L+R     +P + IR+ KNLRVCGD
Sbjct: 645 GYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIR----MEPSQPIRIVKNLRVCGD 700

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH   K +SK+     ++RD  RFH F GG CSC DYW
Sbjct: 701 CHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 220/445 (49%), Gaps = 51/445 (11%)

Query: 4   VSFSLVSERQRLADS------LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMY 57
           V   ++ E QR  +S      ++  ++   L  G  +HG ++K  F  DL ++N LI  Y
Sbjct: 117 VFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFY 176

Query: 58  AKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLS 117
           +  G+++ A  VF K++E+++VSW +++ GF+Q G+ +  L LF +M   + +PN  T+ 
Sbjct: 177 SSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMV 236

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD----- 172
             + A      +E G        ++G + N ++ N+++DMY KCG + +A R+FD     
Sbjct: 237 GVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296

Query: 173 --------------------------VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
                                     VMP + +  WNA+I+ Y   G   + L +FR++Q
Sbjct: 297 DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356

Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            +    P+E T  STL AC  LG++  G  IH ++   G   +    I  SL+D Y KCG
Sbjct: 357 LNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFH--ITTSLIDMYSKCG 414

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +A  VF  +E++ V  WS++I G A   +   A++LF +++E  ++ +    ++++ 
Sbjct: 415 HLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLC 474

Query: 326 VFADFALVEQGK----QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-V 380
             +   LV++G+    Q+      VP     +    +VD+  + G ++EA EL  +MP V
Sbjct: 475 ACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC---MVDILGRAGCLEEAVELIEKMPIV 531

Query: 381 KNVVTWTVIITG---YGKHGLAKEA 402
            +   W  ++     YG   LA+ A
Sbjct: 532 PSASVWGALLGACRIYGNVELAEMA 556


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 380/687 (55%), Gaps = 22/687 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDL-MLNNDLIDMYAKCGEMNGACAVFDKMLER- 76
           L+CC+    L     +H +L   GF          LI +Y+K G+++ A  +FD      
Sbjct: 32  LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88

Query: 77  -------NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
                  N      ++  +   G +   + L+  M    V  N FT    +K        
Sbjct: 89  HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G  +HG  +++GF  +  V  +++DMY+KCG I +A  +FD M  + ++ W AMI  Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             A    K L+LFRKMQE G + DE T  S   A G LG       +HG+ + +GF   V
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDV 268

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              +  S+V  Y KCG +  AR VFD +E+++ ISW+S++ GY Q     +A+ LF Q++
Sbjct: 269 S--VGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
                 +      M+   +       G+++H +       +DT++ N+I+DMY+KCG +D
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 386

Query: 370 EATELFN--EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            A E+FN  E+  ++V +W V+I+GYG HG  KEA+ LF +M ++ VEP+ + + ++LSA
Sbjct: 387 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GL++E ++ F+ +     ++P ++HY+C+VD LGRAG L+EA  LI+ +P +PS  
Sbjct: 447 CSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE 505

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL ACR+HG+ ELG      L +L+ ++   YV+MSNI+A +  W E E +R+  +
Sbjct: 506 VWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMK 565

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
           S+GLKK A  S +E   E+H F+  D + P   ++++ +  +   MK  +G+V  +   L
Sbjct: 566 SRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK-MVGYVPDLSCVL 624

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD++ E KE  L  HSEKLA+   +++       G  I+V KNLRVC DCH   K +S I
Sbjct: 625 HDVEPEDKEHLLNYHSEKLAVAFGIMK----MDQGMPIQVTKNLRVCSDCHWAFKFISSI 680

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD  RFH F+GG CSCGDYW
Sbjct: 681 YGRKIIVRDGNRFHHFQGGRCSCGDYW 707


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/661 (37%), Positives = 390/661 (59%), Gaps = 24/661 (3%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FSF     N LI  YAK   +  A  +FD+M + + VS+  L+  + + G+ +    LF 
Sbjct: 75  FSF-----NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M  + +  + FTLS  I A G+  +V    Q+H + + +G +    VGN++I  YSK G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 163 RINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
            + EA R+F  +   +  ++WN+M+  Y+      K L L+ +M   G I D FT  S L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG-CLVEARRVFDLIEQK 280
            A  ++  + GG Q H  LI SG  Y   + +   L+D Y KCG C+++ R+VFD I   
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSG--YHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 281 SVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
            ++ W+++I GY+  E+L+ EA+E FRQL+    + D   L  ++   ++ +   QG+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 340 HAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           H  A K  +PS    SV+N+++ MY KCG + +A  LF+ MP  N V++  +I GY +HG
Sbjct: 366 HGLALKLDIPSN-RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
           +  +++ LF++ML  D  P  + +++VL+AC+H+G VE+ + YF+ +     ++P   H+
Sbjct: 425 MGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           SC++D LGRAG+L EA+ LIE++P  P    W  LL ACR+HG++EL  +    LL+LD 
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
            N   YVM++NI++D G   +   +RKL R +G+KK  G SW+EV++ IH F   D  HP
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYAL--HDIQEESKEESLRV--HSEKLAIGLALV 633
           + +KI + L EM +++K ++G+   V+ A    D +   +EE LR+  HSEKLA+   L 
Sbjct: 605 MIKKIQEYLEEMMRKIK-KVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGL- 662

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
              ++ + G+ I VFKNLR+C DCH  IK +S+++K    VRD+ RFH F+ G CSCG Y
Sbjct: 663 ---MSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGY 719

Query: 694 W 694
           W
Sbjct: 720 W 720



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 208/441 (47%), Gaps = 40/441 (9%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR------------------- 169
           +  G  +H + +KS    +  + N  + +YSKC R++ A R                   
Sbjct: 24  LRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISA 83

Query: 170 ------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
                       +FD MP    +++N +IA Y   G +     LF +M+E     D FT 
Sbjct: 84  YAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTL 143

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-L 276
           +  + ACG   +VG   Q+H   + +G    V   +  +L+  Y K G L EARR+F  L
Sbjct: 144 SGIITACGI--NVGLIRQLHALSVVTGLDSYVS--VGNALITSYSKNGFLKEARRIFHWL 199

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
            E +  +SW+S+++ Y Q    ++A+EL+ ++  R L VD F L+S++  F +   +  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKC-GLIDEATELFNEMPVKNVVTWTVIITGYGK 395
            Q HA   K     ++ V + ++D+Y KC G + +  ++F+E+   ++V W  +I+GY  
Sbjct: 260 LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSL 319

Query: 396 H-GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +  L+ EA+  FR++      PD  + + V+SACS+     + ++             RI
Sbjct: 320 YEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRI 379

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
              + ++    + G L +AK L ++MP   +++ + ++++    HG       + + +L 
Sbjct: 380 SVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAGYAQHGMGFQSLHLFQRMLE 438

Query: 515 LDGDNPVNYVMMSNIHADAGS 535
           +D   P N   +S + A A +
Sbjct: 439 MDF-TPTNITFISVLAACAHT 458



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 135/263 (51%), Gaps = 5/263 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC-AVFDKMLERNVVSWTALMCGF- 88
           G+Q H  L+K G+  +  + + LID+Y+KCG     C  VFD++   ++V W  ++ G+ 
Sbjct: 259 GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           L    +   L  F Q+     +P++ +L   I A   +SS   G Q+HG+ +K     N 
Sbjct: 319 LYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNR 378

Query: 149 V-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           + V N++I MYSKCG + +A  +FD MP  + +++N+MIAGY   G   + L LF++M E
Sbjct: 379 ISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE 438

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
               P   TF S L AC   G V  G +I+  ++   F    +      ++D   + G L
Sbjct: 439 MDFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKL 497

Query: 268 VEARRVFDLIE-QKSVISWSSLI 289
            EA R+ + I        WS+L+
Sbjct: 498 SEAERLIETIPFDPGFFXWSALL 520



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +  CS       G Q+HG  +K+   S  + +NN LI MY+KCG +  A  +FD M E N
Sbjct: 350 ISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHN 409

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VS+ +++ G+ Q+G     L LF +M      P   T  + + A      VE+G +I+ 
Sbjct: 410 TVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG-KIYF 468

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAG 193
             MK  F   P  G+   +ID+  + G+++EA R+ + +P       W+A++    + G
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/664 (34%), Positives = 377/664 (56%), Gaps = 10/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  L+ +G  F   L   LI   +  G++  A  VFD +    V  W A++ G+ +N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +  L ++ +M  + V P+ FT    +KA G LS ++ G  +H    + GFE +  V N
Sbjct: 99  HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158

Query: 153 SIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +I +Y+KC R+  A  +F+   +P +++++W A+++ Y   G   + L +F +M++   
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD     S L A   L  +  G  IH  ++  G       +I  SL   Y KCG +  A
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI--SLNTMYAKCGQVATA 276

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           + +FD ++  ++I W+++I GYA+     +A++LF ++  + ++ D   ++S +   A  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +EQ + +  Y ++     D  +S++++DM+ KCG ++ A  +F+    ++VV W+ +I
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GYG HG A+EA+ L+R M  D V P+ V +L +L AC+HSG+V E   +F+R+  D ++
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKI 455

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P+ +HY+CI+D LGRAG LD+A  +I+ MPV+P + +W  LLSAC+ H  +ELG+   +
Sbjct: 456 NPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQ 515

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  +D  N  +YV +SN++A A  W+    +R   + KGL K  G SWVEV   +  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFR 575

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP  E+I + +  +E R+KE  GFV     +LHD+ +E  EE+L  HSE++ I  
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEG-GFVANKDASLHDLNDEEAEETLCSHSERITIAY 634

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    +   G  +R+ KNLR C +CH   K +SK++    VVRD  RFH F+ GVCSC
Sbjct: 635 GLI----STPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSC 690

Query: 691 GDYW 694
           GDYW
Sbjct: 691 GDYW 694



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 7/411 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLER 76
           L+ C     L  G  +H  + ++GF  D+ + N LI +YAKC  +  A  VF+   + ER
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +VSWTA++  + QNG     L +F QM    VKP+   L + + A   L  +E G  IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              MK G E  P +  S+  MY+KCG++  A  +FD M + +LI WNAMI+GY   G++ 
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             + LF +M      PD  + TS + AC  +GS+     +  ++  S   Y     I+ +
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSD--YRDDVFISSA 363

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D + KCG +  AR VFD    + V+ WS++I+GY       EA+ L+R +    +  +
Sbjct: 364 LIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPN 423

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                 ++       +V +G       A             I+D+  + G +D+A E+  
Sbjct: 424 DVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIK 483

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MPV+  VT W  +++   KH   +  +G +    L  ++P    +   LS
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE--LGKYAAQQLFSIDPSNTGHYVQLS 532


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/665 (35%), Positives = 370/665 (55%), Gaps = 11/665 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG  V  G   +L+L ++++ MY K   +  A  VFD+M E++ + W  ++ G+ +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197

Query: 91  NGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           N      + +F  +   S  + +  TL   + A   L  +  GMQIH +  K+G   +  
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V    I +YSKCG+I   + +F       ++ +NAMI GY   G ++  L LF+++   G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                 T  S +   G L  +     IHG+ + S F       ++ +L   Y K   +  
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHAS--VSTALTTVYSKLNEIES 372

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR++FD   +KS+ SW+++I GY Q     +A+ LFR++++     +   ++ ++   A 
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +  GK +H             VS +++ MY KCG I EA  LF+ M  KN VTW  +
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 492

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GYG HG  +EA+ +F +ML   + P  V +L VL ACSH+GLV+E  E F+ + +   
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
            +P ++HY+C+VD LGRAG L  A   IE+M ++P  ++W+TLL ACR+H D  L R V 
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 612

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E L  LD DN   +V++SNIH+   ++ +   +R+ A+ + L K  G + +E+ +  H F
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 672

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +HP  ++I++ L ++E +M+E  G+    + ALHD++EE +E  ++VHSE+LAI 
Sbjct: 673 TSGDQSHPQVKEIYEKLEKLEGKMREA-GYQPETELALHDVEEEERELMVKVHSERLAIA 731

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L+      +PG  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ GVCS
Sbjct: 732 FGLI----ATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCS 787

Query: 690 CGDYW 694
           CGDYW
Sbjct: 788 CGDYW 792



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 223/455 (49%), Gaps = 24/455 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           L D L   ++   L  G+Q+H    K G +S D +L    I +Y+KCG++    A+F + 
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREF 282

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
            + ++V++ A++ G+  NG  +  LSLF ++  S  +    TL + +  SG L  +    
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---Y 339

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IHG C+KS F  +  V  ++  +YSK   I  A ++FD  P KSL +WNAMI+GY   G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            ++  + LFR+MQ+    P+  T T  L AC  LG++  G  +H  + ++ F  S+   +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YV 457

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           + +L+  Y KCG + EARR+FDL+ +K+ ++W+++I GY       EA+ +F ++    +
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQ-----IHAYAAKVPSGLDTSVSN--SIVDMYLKCG 366
                    ++   +   LV++G +     IH Y      G + SV +   +VD+  + G
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY------GFEPSVKHYACMVDILGRAG 571

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
            +  A +    M ++     W  ++     H     A  +  K+   +++PD V Y  +L
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF--ELDPDNVGYHVLL 629

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           S   HS      Q    R    KR   +   Y+ I
Sbjct: 630 SNI-HSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 238/522 (45%), Gaps = 23/522 (4%)

Query: 23  SKNLLLDYG---------VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           SKN  LD+           Q H  ++  GF  D+ L   L    +  G +  A  +F  +
Sbjct: 19  SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENG 132
              +V  +  LM GF  N +  + LS+F  +  S+ +KPN  T +  I A+        G
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             IHG  +  G +   ++G++I+ MY K  R+ +A ++FD MP K  I WN MI+GY   
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 193 GYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
               + + +FR +  E     D  T    L A   L  +  G QIH     +G  YS   
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHDY 257

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V+ G  +  Y KCG +     +F    +  +++++++I GY        ++ LF++L   
Sbjct: 258 VLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
             ++    L S++ V     L+     IH Y  K       SVS ++  +Y K   I+ A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            +LF+E P K++ +W  +I+GY ++GL ++A+ LFR+M   +  P+ V    +LSAC+  
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G +   + +   L      +  I   + ++    + G + EA+ L + M  K  +  W T
Sbjct: 434 GALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNT 491

Query: 492 LLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHA 531
           ++S   +HG    G+E   I   +   G  P     +  ++A
Sbjct: 492 MISGYGLHGQ---GQEALNIFYEMLNSGITPTPVTFLCVLYA 530


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/681 (35%), Positives = 387/681 (56%), Gaps = 15/681 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   +  G  +HG  VK+    +L++NN L+DMY+K G +  +  +F     +NV
Sbjct: 283 LPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNV 342

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSW  ++ GF   G+      L  QM  GS  VK +E T+   +      S + +  ++H
Sbjct: 343 VSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELH 402

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K  F ++ ++ N+ +  Y+KCG ++ A R+F  + +K+L +WNA+I GY  +    
Sbjct: 403 CYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPR 462

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L    +M+  G +PD FT  S L AC  L S+  G ++HGF+I +     +   +  S
Sbjct: 463 LSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL--S 520

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++  Y+ CG L   + +FD +E  S++SW+++I G+ Q      A+ LFRQ+    +Q  
Sbjct: 521 VLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPC 580

Query: 317 GFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           G    SMM VF   +L+     G++ HAYA K     +  ++ SI+DMY K G I ++++
Sbjct: 581 GI---SMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSK 637

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +FN +  K+  +W  +I GYG HG AKEA+ LF +M      PD + +L VL+AC+HSGL
Sbjct: 638 VFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGL 697

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           + E   Y  ++ +   +KP ++HY+C++D LGRAG+LD A  +   M  +P + IW +LL
Sbjct: 698 LHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLL 757

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           S CR+H +LE+G +V   L  L+ + P NYV++SN++A  G W++  ++R+  +   L+K
Sbjct: 758 SWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRK 817

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
            AG SW+E++ ++  F  G+      E+I  +   +E ++  ++G+        HD+ EE
Sbjct: 818 DAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKI-WKMGYRPDTSSVQHDLSEE 876

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            K E LR HSEKLAI   L++       G  +RV+KNLR+C DCH   K +SK+++   V
Sbjct: 877 EKIEQLRGHSEKLAITYGLIK----TSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIV 932

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD  RFH F  G CSCGDYW
Sbjct: 933 VRDNKRFHHFNKGFCSCGDYW 953



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 258/551 (46%), Gaps = 56/551 (10%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +L   +I MYA CG  + + + FD +  +N+  W A++  + +N      L +F +M 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMI 178

Query: 106 SSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
           S + + P+ FT    IKA   +S V  G+ +HG+ +K+G   +  VGN+++  Y   G +
Sbjct: 179 SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           ++A ++FD+MP ++L++WN+MI   V +   D G  +          PD  T  + L  C
Sbjct: 239 SDALKLFDIMPERNLVSWNSMIR--VFSDNGDDGAFM----------PDVATVVTVLPVC 286

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
                +G G  +HG+ +        + V+  +L+D Y K GC+++++ +F L   K+V+S
Sbjct: 287 AREREIGVGKGVHGWAVK--LSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVS 344

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERS--LQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           W++++ G++ E ++    +L RQ+   S  ++ D   + + + V  D +++   K++H Y
Sbjct: 345 WNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCY 404

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           + K     D  ++N+ V  Y KCG +  A  +F+ +  K + +W  +I GY +    + +
Sbjct: 405 SLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLS 464

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEESQE-----YFS---- 442
           +    +M    + PD     ++LSACS           H  ++    E     Y S    
Sbjct: 465 LDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 524

Query: 443 -----RLCNDKRMKPRIEHYSCIVDSLGRAGRL-----DEAKNLIESMP---VKPSIAIW 489
                 LC  + +   +E  S +  +    G L     + A  L   M    ++P     
Sbjct: 525 YIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISM 584

Query: 490 QTLLSACRVHGDLELGREVGEILLR-LDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
            T+  AC +   L LGRE     L+ L  DN      + +++A  G+  +  ++      
Sbjct: 585 MTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKV-----F 639

Query: 549 KGLKKVAGRSW 559
            GLK+ +  SW
Sbjct: 640 NGLKEKSAASW 650


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/661 (37%), Positives = 390/661 (59%), Gaps = 24/661 (3%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FSF     N LI  YAK   +  A  +FD+M + + VS+  L+  + + G+ +    LF 
Sbjct: 75  FSF-----NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M  + +  + FTLS  I A G+  +V    Q+H + + +G +    VGN++I  YSK G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 163 RINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
            + EA R+F  +   +  ++WN+M+  Y+      K L L+ +M   G I D FT  S L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG-CLVEARRVFDLIEQK 280
            A  ++  + GG Q H  LI SG  Y   + +   L+D Y KCG C+++ R+VFD I   
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSG--YHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 281 SVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
            ++ W+++I GY+  E+L+ EA+E FRQL+    + D   L  ++   ++ +   QG+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 340 HAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           H  A K  +PS    SV+N+++ MY KCG + +A  LF+ MP  N V++  +I GY +HG
Sbjct: 366 HGLALKLDIPSN-RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
           +  +++ LF++ML     P  + +++VL+AC+H+G VE+ + YF+ +     ++P   H+
Sbjct: 425 MGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           SC++D LGRAG+L EA+ LIE++P  P    W  LL ACR+HG++EL  +    LL+LD 
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
            N   YVM++NI++D G   +   +RKL R +G+KK  G SW+EV++ IH F   D  HP
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYAL--HDIQEESKEESLRV--HSEKLAIGLALV 633
           + +KI + L EM +++K ++G+   V+ AL   D +   +EE LR+  HSEKLA+   L 
Sbjct: 605 MIKKIQEYLEEMMRKIK-KVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGL- 662

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
              ++ + G+ I VFKNLR+C DCH  IK +S+++K    VRD+ RFH F+ G CSCG Y
Sbjct: 663 ---MSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGY 719

Query: 694 W 694
           W
Sbjct: 720 W 720



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 210/443 (47%), Gaps = 44/443 (9%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR------------------- 169
           +  G  +H + +KS    +  + N  + +YSKC R++ A R                   
Sbjct: 24  LRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISA 83

Query: 170 ------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
                       +FD MP    +++N +IA Y   G +     LF +M+E     D FT 
Sbjct: 84  YAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTL 143

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-L 276
           +  + ACG   +VG   Q+H   + +G    V   +  +L+  Y K G L EARR+F  L
Sbjct: 144 SGIITACGI--NVGLIRQLHALSVVTGLDSYVS--VGNALITSYSKNGFLKEARRIFHWL 199

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
            E +  +SW+S+++ Y Q    ++A+EL+ ++  R L VD F L+S++  F +   +  G
Sbjct: 200 SEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGG 259

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKC-GLIDEATELFNEMPVKNVVTWTVIITGYGK 395
            Q HA   K     ++ V + ++D+Y KC G + +  ++F+E+   ++V W  +I+GY  
Sbjct: 260 LQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSL 319

Query: 396 H-GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +  L+ EA+  FR++ +    PD  + + V+SACS+     + ++             RI
Sbjct: 320 YEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRI 379

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
              + ++    + G L +AK L ++MP   +++ + ++++    HG   +G +   +  R
Sbjct: 380 SVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAGYAQHG---MGFQSLHLFQR 435

Query: 515 L--DGDNPVNYVMMSNIHADAGS 535
           +   G  P N   +S + A A +
Sbjct: 436 MLEMGFTPTNITFISVLAACAHT 458



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 5/263 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC-AVFDKMLERNVVSWTALMCGF- 88
           G+Q H  L+K G+  +  + + LID+Y+KCG     C  VFD++   ++V W  ++ G+ 
Sbjct: 259 GLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYS 318

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           L    +   L  F Q+     +P++ +L   I A   +SS   G Q+HG+ +K     N 
Sbjct: 319 LYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNR 378

Query: 149 V-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           + V N++I MYSKCG + +A  +FD MP  + +++N+MIAGY   G   + L LF++M E
Sbjct: 379 ISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLE 438

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P   TF S L AC   G V  G +I+  ++   F    +      ++D   + G L
Sbjct: 439 MGFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKL 497

Query: 268 VEARRVFDLIE-QKSVISWSSLI 289
            EA R+ + I        WS+L+
Sbjct: 498 SEAERLIETIPFDPGFFFWSALL 520



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 5/179 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +  CS       G Q+HG  +K+   S  + +NN LI MY+KCG +  A  +FD M E N
Sbjct: 350 ISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHN 409

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VS+ +++ G+ Q+G     L LF +M      P   T  + + A      VE+G +I+ 
Sbjct: 410 TVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDG-KIYF 468

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAG 193
             MK  F   P  G+   +ID+  + G+++EA R+ + +P       W+A++    + G
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/701 (35%), Positives = 381/701 (54%), Gaps = 46/701 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLER--NVVSWTALMCGF 88
           Q+H  ++K G    L   + LI+  A     +++ A ++F  +  +  N+  W  L+   
Sbjct: 43  QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
                  + L LF QM  S + PN  T  +  K+     +     Q+H   +K     +P
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162

Query: 149 VVGNSIIDMYSKCG-------------------------------RINEAARMFDVMPAK 177
            V  S+I MYS+ G                                +++A R+FD +PAK
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            +++WNAMIAGYV +G  ++ L  F +MQE    P++ T  S L ACG L S+  G  I 
Sbjct: 223 DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIG 282

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
            ++   GF  +++ V A  LVD Y KCG +  AR++FD +E K VI W+++I GY     
Sbjct: 283 SWVRDRGFGKNLQLVNA--LVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL----DTS 353
             EA+ LF  +   ++  +     +++   A    ++ GK +HAY  K   G     + S
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           +  SI+ MY KCG ++ A ++F  M  +++ +W  +I+G   +G A+ A+GLF +M+ + 
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
            +PD + ++ VLSAC+ +G VE    YFS +  D  + P+++HY C++D L R+G+ DEA
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
           K L+ +M ++P  AIW +LL+ACR+HG +E G  V E L  L+ +N   YV++SNI+A A
Sbjct: 521 KVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGA 580

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G W++  ++R     KG+KKV G + +E+D  +H F  GD  HP +E I ++L E++ R+
Sbjct: 581 GRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD-RL 639

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
            EE GFV      L+D+ EE KE +L  HSEKLAI   L+    + +PG  IR+ KNLRV
Sbjct: 640 LEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLI----STKPGSTIRIVKNLRV 695

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           C +CH   K +SKI     + RD  RFH F+ G CSC D W
Sbjct: 696 CRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 219/470 (46%), Gaps = 41/470 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK------ 72
            + C+K+       QLH   +K+       ++  LI MY++ GE+  A  VFDK      
Sbjct: 134 FKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDA 193

Query: 73  -------------------------MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
                                    +  ++VVSW A++ G++Q+G  +  L+ F +M  +
Sbjct: 194 VSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEA 253

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            V PN+ T+ + + A G L S+E G  I       GF  N  + N+++DMYSKCG I  A
Sbjct: 254 DVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTA 313

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            ++FD M  K +I WN MI GY      ++ L+LF  M      P++ TF + L AC SL
Sbjct: 314 RKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASL 373

Query: 228 GSVGGGTQIHGFLITS--GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           G++  G  +H ++  +  G        +  S++  Y KCGC+  A +VF  +  +S+ SW
Sbjct: 374 GALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASW 433

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I G A   +   A+ LF ++     Q D      ++        VE G +  +   K
Sbjct: 434 NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK 493

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
              G+   + +   ++D+  + G  DEA  L   M ++ +   W  ++     HG  +  
Sbjct: 494 -DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE-- 550

Query: 403 VGLFRKMLLDDVEPDGV-AYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            G +    L ++EP+   AY+ + +  + +G  ++  +  ++L NDK MK
Sbjct: 551 FGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKL-NDKGMK 599



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 11/297 (3%)

Query: 1   MNRVSFSLVSERQR-LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
             R+  + VS  Q  +   L  C     L+ G  +   +   GF  +L L N L+DMY+K
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK 306

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CGE+  A  +FD M +++V+ W  ++ G+      +  L LF  M   +V PN+ T    
Sbjct: 307 CGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAV 366

Query: 120 IKASGVLSSVENGMQIHGMCMK----SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           + A   L +++ G  +H    K    +G   N  +  SII MY+KCG +  A ++F  M 
Sbjct: 367 LPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG 426

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           ++SL +WNAMI+G  + G++++ L LF +M   G  PD+ TF   L AC   G V  G  
Sbjct: 427 SRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG-- 484

Query: 236 IHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
            H +  +    Y +   +   G ++D   + G   EA+ +   +E +     W SL+
Sbjct: 485 -HRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLL 540


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/630 (36%), Positives = 368/630 (58%), Gaps = 29/630 (4%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FDK+ +R+V+SW +++ G++ NG  +  L ++ QM    +  +  T+ + +     
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++  G  +H + +KS FE      N+++DMYSKCG ++ A R+F+ M  +++++W +M
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAGY   G SD  + L ++M++ G   D    TS L AC   GS+  G  +H ++  +  
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             ++   +  +L+D Y KCG +  A  VF  +  K +ISW+++I                
Sbjct: 384 ESNL--FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------- 425

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  L+ D   ++ ++   A  + +E+GK+IH Y  +     D  V+N++VD+Y+KC
Sbjct: 426 -----GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G++  A  LF+ +P K++V+WTV+I GYG HG   EA+  F +M    +EPD V+++++L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSHSGL+E+   +F  + ND  ++P++EHY+C+VD L R G L +A   +E++P+ P 
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPD 600

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW  LL  CR + D+EL  +V E +  L+ +N   YV+++NI+A+A  W E +RLR+ 
Sbjct: 601 ATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREK 660

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
              +GL+K  G SW+E+  +++ F  G++ +HP ++ I  +L +M ++MKEE G     K
Sbjct: 661 IGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEE-GHFPKTK 719

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           YAL +  E  KE +L  HSEKLA+   L    L   P K IRV KNLRVCGDCHE  K +
Sbjct: 720 YALINADEMQKEMALCGHSEKLAMAFGL----LTLPPRKTIRVTKNLRVCGDCHEMAKFM 775

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK  +   V+RD+ RFH F+ G CSC  +W
Sbjct: 776 SKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 210/409 (51%), Gaps = 31/409 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ +  L  G  +H   +K  F   +  +N L+DMY+KCG+++GA  VF+KM ERNVVSW
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G+ ++G +   + L  QM    VK +   +++ + A     S++NG  +H     
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 380

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +  E N  V N+++DMY+KCG +  A  +F  M  K +I+WN MI               
Sbjct: 381 NNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------------- 425

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
                  GE+ PD  T    L AC SL ++  G +IHG+++ +G  YS    +A +LVD 
Sbjct: 426 -------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNG--YSSDRHVANALVDL 476

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           YVKCG L  AR +FD+I  K ++SW+ +I GY       EA+  F ++R+  ++ D    
Sbjct: 477 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            S++   +   L+EQG +   Y  K    ++  + +   +VD+  + G + +A E    +
Sbjct: 537 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETL 595

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P+  +   W  ++ G   +   + A  +  ++   ++EP+   Y  +L+
Sbjct: 596 PIAPDATIWGALLCGCRNYHDIELAEKVAERVF--ELEPENTGYYVLLA 642



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 219/490 (44%), Gaps = 75/490 (15%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           E +     L+ C+       G ++H  +       D  L   L+  YA CG++     VF
Sbjct: 98  ETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVF 157

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D M ++NV  W  ++  + + G+ K  + LF  M                        VE
Sbjct: 158 DTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM------------------------VE 193

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  I G   +S FE                        +FD +  + +I+WN+MI+GYV
Sbjct: 194 KG--IEGKRPESAFE------------------------LFDKLCDRDVISWNSMISGYV 227

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G +++GL ++++M   G   D  T  S L  C + G++  G  +H   I S F   + 
Sbjct: 228 SNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRIN 287

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              + +L+D Y KCG L  A RVF+ + +++V+SW+S+I GY ++     A++L +Q+ +
Sbjct: 288 --FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK 345

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +++D   ++S++   A    ++ GK +H Y        +  V N+++DMY KCG ++ 
Sbjct: 346 EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEA 405

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+ M VK++++W  +I                      +++PD      VL AC+ 
Sbjct: 406 ANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACVLPACAS 444

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              +E  +E    +  +     R    + +VD   + G L  A+ L + +P K  ++ W 
Sbjct: 445 LSALERGKEIHGYILRNGYSSDR-HVANALVDLYVKCGVLGLARLLFDMIPSKDLVS-WT 502

Query: 491 TLLSACRVHG 500
            +++   +HG
Sbjct: 503 VMIAGYGMHG 512



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 27/299 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  LD G  +H  +       +L + N L+DMYAKCG M  A +VF  M+ +++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  ++                       +KP+  T++  + A   LS++E G +IHG 
Sbjct: 419 ISWNTMI---------------------GELKPDSRTMACVLPACASLSALERGKEIHGY 457

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G+  +  V N+++D+Y KCG +  A  +FD++P+K L++W  MIAGY + GY ++ 
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M++ G  PDE +F S L AC   G +  G +   +++ + F    K      +V
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMV 576

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D   + G L +A    + +        W +L+ G     ++    EL  ++ ER  +++
Sbjct: 577 DLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDI----ELAEKVAERVFELE 631



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 98/184 (53%), Gaps = 4/184 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  + + +A  L  C+    L+ G ++HG +++ G+S D  + N L+D+Y KCG +  A 
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD +  +++VSWT ++ G+  +G     ++ F +M  + ++P+E +  + + A     
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
            +E G +   + MK+ F   P + +   ++D+ S+ G +++A    + +P A     W A
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606

Query: 185 MIAG 188
           ++ G
Sbjct: 607 LLCG 610


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/677 (35%), Positives = 374/677 (55%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G  +  ++ +  F  DL +   LI MYA+C     A  VF +M + N+
Sbjct: 268 LDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNL 327

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W+A++  F  +G+    L  F  M    + PN  T  + +      S +E   +IH +
Sbjct: 328 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 387

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             + G +    + N+++++Y +C   ++A  +FD +   +LI+WN+MI  YV     D  
Sbjct: 388 ITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDA 447

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSL 257
           L LFR MQ+ G  PD   F + L AC ++GS G   + +H  +  SG   S   ++  SL
Sbjct: 448 LQLFRTMQQQGIQPDRVNFMTILGAC-TIGSHGRTRKLVHQCVEESGLGGS--PLVQTSL 504

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           V+ Y K G L  A  +   ++++ + +W+ LI GYA      EA+E +++L+  ++ VD 
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDK 564

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               S++        + +GK IH+ A +     D  V N++ +MY KCG ++ A  +F+ 
Sbjct: 565 VTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDS 624

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP+++ V+W  ++  Y +HG ++E + L RKM  + V+ +G+ +++VLS+CSH+GL+ E 
Sbjct: 625 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEG 684

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            +YF  L +D+ ++ + EHY C+VD LGRAG+L EA+  I  MP++P I  W +LL ACR
Sbjct: 685 CQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACR 744

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           V  DL+ G+     LL LD  N    V++SNI+++ G W    +LR+   S+ +KKV G 
Sbjct: 745 VQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGI 804

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S ++V  ++H F   D +HP   +I+  + E+   M+E  G+V   K  LHD+ EE KE 
Sbjct: 805 SSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREA-GYVPDTKMVLHDVDEEQKES 863

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSEKLAI   L+    +      + +FKNLRVC DCH   K +SKI     VVRD 
Sbjct: 864 LLAYHSEKLAIAFGLI----STPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDN 919

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F  G CSC DYW
Sbjct: 920 HRFHHFRDGSCSCKDYW 936



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 273/535 (51%), Gaps = 22/535 (4%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  +H  + +   S D+ +N  L++ Y KCG +  A  VFD M  R+V +W +++  
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  +  +     +F +M     + +  T  + + A     ++++G  +     ++ FE +
Sbjct: 236 YSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG ++I MY++C    +AA++F  M   +LITW+A+I  +   G+  + L  FR MQ+
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G +P+  TF S L    +   +   ++IH  +   G   +  T +  +LV+ Y +C   
Sbjct: 356 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT--TTMRNALVNVYGRCESP 413

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +AR VFD +E  ++ISW+S+I  Y Q E   +A++LFR ++++ +Q D     +++G  
Sbjct: 414 DDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
              +     K +H    +   G    V  S+V+MY K G +D A  +  EM  + +  W 
Sbjct: 474 TIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWN 533

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR---- 443
           V+I GY  HG ++EA+  ++K+ L+ +  D V +++VL+AC+ S  + E +   S     
Sbjct: 534 VLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC 593

Query: 444 -LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            L +D  +K      + + +   + G ++ A+ + +SMP++ +++ W  +L A   HG+ 
Sbjct: 594 GLDSDVIVK------NALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGES 646

Query: 503 ELGREVGEILLRLDGD----NPVNYVMMSNIHADAGSWNE-CERLRKLARSKGLK 552
           E   EV +++ +++ +    N + +V + +  + AG   E C+    L   +G++
Sbjct: 647 E---EVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 698



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 245/470 (52%), Gaps = 11/470 (2%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY++CG +  A A F K+  RNVVSW  ++  +    + +  L+LF  M    V PN  T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           L   + + G    + +G+ +H + ++ GF  N +V  ++++MY KCG + +A  +F+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 176 AKSLITWNAMIAGYVLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
            K+++TWNAM+  Y L G   K  + LF +M   G   +  TF + L +     ++  G 
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
            IH  +  S   +S+   +  +LV+ Y KCG L +AR+VFD +  +SV +W+S+I  Y+ 
Sbjct: 181 FIHSCVRES--EHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
            E   EA  +F+++++   + D     S++    +   ++ GK +    ++    LD  V
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             +++ MY +C   ++A ++F  M   N++TW+ IIT +  HG   EA+  FR M  + +
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358

Query: 415 EPDGVAYLAVLSA-CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
            P+ V ++++L+   + SGL E S+ +   L  +  +       + +V+  GR    D+A
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHL--LITEHGLDDTTTMRNALVNVYGRCESPDDA 416

Query: 474 KNLIESMPVKPSIAIWQTLLS---ACRVHGD-LELGREVGEILLRLDGDN 519
           + + + + + P++  W +++     C  H D L+L R + +  ++ D  N
Sbjct: 417 RTVFDQLEL-PNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVN 465



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 274/537 (51%), Gaps = 23/537 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L  G+ +H   ++ GF  + ++   L++MY KCG +  A +VF++M E+NV
Sbjct: 65  LNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNV 124

Query: 79  VSWTALMCGF-LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W A++  + LQ    K  + LF +M    VK N  T    + +     ++  G  IH 
Sbjct: 125 VTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHS 184

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              +S    +  V  ++++ Y+KCG + +A ++FD MP +S+ TWN+MI+ Y ++  S +
Sbjct: 185 CVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGE 244

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
              +F++MQ+ GE  D  TF S L AC +  ++  G  +   +  + F   +   +  +L
Sbjct: 245 AFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL--FVGTAL 302

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y +C    +A +VF  ++Q ++I+WS++I  +A   +  EA+  FR +++  +  + 
Sbjct: 303 ITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNR 362

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELF 375
               S++  F   + +E+  +IH    +   GLD  T++ N++V++Y +C   D+A  +F
Sbjct: 363 VTFISLLNGFTTPSGLEELSRIHLLITE--HGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +++ + N+++W  +I  Y +     +A+ LFR M    ++PD V ++ +L AC+  G   
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHG 479

Query: 436 ESQEYFSRLCNDKRM--KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            +++   +   +  +   P ++  + +V+   +AG LD A+ +++ M  +  I  W  L+
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLI 536

Query: 494 SACRVHGDLELGREVGEILLRLDGDN-PVNYVMMSNIHADAGSWNECERLRKLARSK 549
           +   +HG     RE  E   +L  +  PV+ V   ++       N C     LA  K
Sbjct: 537 NGYALHGR---SREALEAYQKLQLEAIPVDKVTFISV------LNACTSSTSLAEGK 584


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/684 (35%), Positives = 387/684 (56%), Gaps = 11/684 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+++  +  G  +HG  +K+    ++++NN L+DMY+KCG +N A  +F    
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
            +NVVSW  ++ GF   G+      L  QM  G   ++ +E T+   +      S + N 
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411

Query: 133 MQIHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
            ++H   +K  F   N +V N+ +  Y+KCG ++ A R+F  + +K++ +WNA+I GY  
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           +      L  + +M+  G +PD FT  S L AC  + S+  G ++HG +I +        
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFV 531

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            I  SL+  Y+ CG L  A  +FD +E K+++SW++++ GY Q      A+ LFRQ+   
Sbjct: 532 YI--SLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLY 589

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +Q     + S+ G  +    +  G++ H YA K     +  ++ S++DMY K G + E+
Sbjct: 590 GVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES 649

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            ++FN +  ++V +W  ++ GYG HG AKEA+ LF +M      PD + +L VL+AC+HS
Sbjct: 650 FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS 709

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA-KNLIESMPVKPSIAIWQ 490
           GLV E   Y  ++     M P ++HY+C++D L RAG+LDEA K   E M  +P + IW 
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
            LLS+CR+H +LE+G ++   L   + + P NYV++SN++A +G W+E  ++R+  +   
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMS 829

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           L+K AG SW+E++ ++  F  G+ +    E+I  +   +E+ +  ++G+        HD+
Sbjct: 830 LRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIG-KMGYRPDTSSVQHDL 888

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            EE K E LR HSEKLAI   L+R       G  +RV+KNLR+C DCH   K +SK+++ 
Sbjct: 889 SEEEKTEQLRGHSEKLAITYGLIR----TSEGTTLRVYKNLRICVDCHNAAKLISKVMER 944

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             VVRD  RFH F+ G CSCGDYW
Sbjct: 945 EIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 247/497 (49%), Gaps = 21/497 (4%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
            S D +L   +I MY+ CG  + + +VFD + ++N+  W A++  + +N      L +F 
Sbjct: 113 LSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFV 172

Query: 103 QM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC 161
           +M   S + P+ FT    +KA   +S V+ G+ +HG+ +K+    +  V N+++  Y   
Sbjct: 173 KMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTN 232

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE----IPDEFTF 217
           G +++A R+F +MP ++L++WN+MI  +   G S++  LL  +M E  +     PD  T 
Sbjct: 233 GSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATL 292

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            + L  C     +G G  +HG  +       V  V+  +L+D Y KCGC+ +A+ +F L 
Sbjct: 293 ATVLPVCARDREIGVGKGVHGLAMKLSLDKEV--VVNNALMDMYSKCGCINDAQVIFKLN 350

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQ 335
             K+V+SW++++ G++   ++ +  +L RQ+      L+ D   + + + V  + +++  
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410

Query: 336 GKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
            K++H Y+ K     +   V+N+ V  Y KCG +  A  +F  +  K V +W  +I GY 
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +    + ++  + +M    + PD     ++LSACS    ++  +E    +     ++ R+
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLI-----IRNRL 525

Query: 455 EHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           E  S +  SL       G L  A  L ++M  K ++  W T+++    +G  E    +  
Sbjct: 526 ERDSFVYISLLSLYIHCGELSTAHVLFDAMEDK-TLVSWNTMVNGYLQNGFPERALSLFR 584

Query: 511 ILLRLDGDNPVNYVMMS 527
            ++ L G  P    MMS
Sbjct: 585 QMV-LYGVQPCEISMMS 600


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/663 (36%), Positives = 368/663 (55%), Gaps = 27/663 (4%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            LH   +K G    + + N L+D Y K G +  A  VF +M +++ V++ A+M G  + G 
Sbjct: 371  LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                L LF  M  +    +   L                +Q      +S    N  V NS
Sbjct: 431  HTQALQLFAAMRRAGYSRHPLHL----------------LQYSHSRSRSTSVLNVFVNNS 474

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
            ++D YSKC  +++  R+FD MP +  +++N +IA Y     +   L LFR+MQ+ G    
Sbjct: 475  LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534

Query: 214  EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
               + + L   GSL  V  G QIH  L+  G   + + ++  +L+D Y KCG L  A+  
Sbjct: 535  VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL--ASEDLLGNALIDMYSKCGMLDAAKSN 592

Query: 274  FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
            F    +KS ISW++LI GY Q     EA++LF  +R   L+ D    SS++   +  A++
Sbjct: 593  FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI 652

Query: 334  EQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
              G+Q+H+Y  +  SG  +SV   + +VDMY KCG +DEA   F+EMP +N ++W  +I+
Sbjct: 653  GLGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 710

Query: 392  GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
             Y  +G AK A+ +F  ML     PD V +L+VL+ACSH+GL +E  +YF  + +   + 
Sbjct: 711  AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 770

Query: 452  PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
            P  EHY+C++D+LGR G   + + ++  MP K    IW ++L +CR+HG+ EL R   + 
Sbjct: 771  PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 830

Query: 512  LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
            L  ++  +   YV++SNI+A AG W +   ++K+ R +G++K +G SWVE+ ++I+ F  
Sbjct: 831  LFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFAS 890

Query: 572  GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
             D T P+ ++I   L  + K M ++ G+   +  ALH +  E K ESL+ HSE+LAI  A
Sbjct: 891  NDLTSPMIDEIKDELDRLYKEMDKQ-GYKPDITCALHMVDHELKLESLKYHSERLAIAFA 949

Query: 632  LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
            L    +N   G  IR+ KNL  C DCH  IK +SKI+    +VRD+ RFH F+ GVCSCG
Sbjct: 950  L----MNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCG 1005

Query: 692  DYW 694
            DYW
Sbjct: 1006 DYW 1008



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 234/509 (45%), Gaps = 33/509 (6%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FS +L+L+      Y+  G++  A  +F     RN  +WT +M      G     LSLF 
Sbjct: 289 FSLNLILS-----AYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 343

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            M    V P+  T++T +   G          +H   +K G + +  V N+++D Y K G
Sbjct: 344 AMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHG 398

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            +  A R+F  M  K  +T+NAM+ G    G   + L LF  M+  G             
Sbjct: 399 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSH 458

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           +     SV                  +   +  SL+DFY KC CL + RR+FD + ++  
Sbjct: 459 SRSRSTSV------------------LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDN 500

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +S++ +I  YA  +  A  + LFR++++          ++M+ V      V  GKQIHA 
Sbjct: 501 VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQ 560

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
              +    +  + N+++DMY KCG++D A   F+    K+ ++WT +ITGY ++G  +EA
Sbjct: 561 LVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEA 620

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF  M    + PD   + +++ A S   ++   ++  S L      K  +   S +VD
Sbjct: 621 LQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG-YKSSVFSGSVLVD 679

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
              + G LDEA    + MP + SI+ W  ++SA   +G+ +   ++ E +L   G NP +
Sbjct: 680 MYAKCGCLDEALRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHC-GFNPDS 737

Query: 523 YVMMSNIHA--DAGSWNECERLRKLARSK 549
              +S + A    G  +EC +   L + +
Sbjct: 738 VTFLSVLAACSHNGLADECMKYFHLMKHQ 766



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H  LV +G + + +L N LIDMY+KCG ++ A + F    E++ +SWTAL+ G++Q
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 613

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L LF  M  + ++P+  T S+ IKAS  L+ +  G Q+H   ++SG++ +   
Sbjct: 614 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 673

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G+ ++DMY+KCG ++EA R FD MP ++ I+WNA+I+ Y   G +   + +F  M   G 
Sbjct: 674 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 733

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  TF S L AC   G +      +  L+   +  S        ++D   + GC  + 
Sbjct: 734 NPDSVTFLSVLAACSHNG-LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQV 792

Query: 271 RRVF-DLIEQKSVISWSSLI 289
           +++  ++  +   I W+S++
Sbjct: 793 QKMLVEMPFKADPIIWTSIL 812



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  +R   +  ++  S   ++  G QLH  L++ G+   +   + L+DMYAKCG ++ A 
Sbjct: 632 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
             FD+M ERN +SW A++  +   G AK  + +F  M      P+  T  + + A     
Sbjct: 692 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 751

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
             +  M+   + MK  +  +P   +   +ID   + G  ++  +M   MP K+  I W +
Sbjct: 752 LADECMKYFHL-MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 810

Query: 185 MI 186
           ++
Sbjct: 811 IL 812


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/674 (35%), Positives = 376/674 (55%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +V+ G+  D+ + N LI MY KCG++  A  +FD+M  R++
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +NG     L LF  M   SV P+  TL++ I A  +L     G  IH  
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +GF  +  V NS+  MY   G   EA ++F  M  K +++W  MI+GY      DK 
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  +R M +    PDE T  + L AC +LG +  G ++H   I +     V  ++A +L+
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV--IVANNLI 440

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KC C+ +A  +F  I +K+VISW+S+I G        EA+   RQ++  +LQ +  
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAI 499

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L++ +   A    +  GK+IHA+  +   GLD  + N+++DMY++CG ++ A   FN  
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V +W +++TGY + G     V LF +M+   V PD + ++++L  CS S +V +  
Sbjct: 560 K-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YFS++  D  + P ++HY+C+VD LGRAG L EA   I+ MPV P  A+W  LL+ACR+
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H  ++LG    + +  LD  +   Y+++ N++AD G W E  ++R++ +  GL   AG S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F   D  HP T++I+ VL    ++M  E+G     + +  D  E S++E 
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM-SEVGLTKISESSSMDETEISRDEI 796

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+ AI   L+    N  PG  I V KNL +C +CH+ +K +SK ++    VRDA 
Sbjct: 797 FCGHSERKAIAFGLI----NTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 852

Query: 679 RFHRFEGGVCSCGD 692
            FH F+ G CSCGD
Sbjct: 853 HFHHFKDGECSCGD 866



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 250/479 (52%), Gaps = 11/479 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C      + G +++   +    S  + L N  + M+ + G +  A  VF KM ERN+
Sbjct: 101 VRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNL 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  L+ G+ + G     + L+ +M     VKP+ +T    ++  G +  +  G ++H 
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G+E +  V N++I MY KCG +  A  +FD MP + +I+WNAMI+GY   G   +
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GL LF  M+     PD  T TS + AC  LG    G  IH ++IT+GF  +V   +  SL
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSL 338

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
              Y+  G   EA ++F  +E+K ++SW+++I GY       +A++ +R + + S++ D 
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             +++++   A    ++ G ++H  A K        V+N++++MY KC  ID+A ++F+ 
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P KNV++WT II G   +    EA+   R+M +  ++P+ +   A L+AC+  G +   
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCG 517

Query: 438 QEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E  + +    R    ++ +  + ++D   R GR++ A +   S   K  +  W  LL+
Sbjct: 518 KEIHAHVL---RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLT 571



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 212/414 (51%), Gaps = 5/414 (1%)

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G   NG  +  + L   M    V  +E      ++      + E G +++ + + S    
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              +GN+ + M+ + G + +A  +F  M  ++L +WN ++ GY   GY D+ + L+ +M 
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187

Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G + PD +TF   L+ CG +  +  G ++H  ++  G+   +  V   +L+  YVKCG
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVKCG 245

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +  AR +FD + ++ +ISW+++I GY +     E +ELF  +R  S+  D   L+S++ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                     G+ IHAY       +D SV NS+  MYL  G   EA +LF+ M  K++V+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +I+GY  + L  +A+  +R M  D V+PD +   AVLSAC+  G ++   E   +L 
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLA 424

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
              R+   +   + +++   +   +D+A ++  ++P K  I+ W ++++  R++
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 54/383 (14%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    LD GV+LH   +K      +++ N+LI+MY+KC  ++ A  +F  + 
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NV+SWT+++ G   N      L    QM   +++PN  TL+  + A   + ++  G +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKE 519

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +++G   +  + N+++DMY +CGR+N A   F+    K + +WN ++ GY   G 
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQ 578

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS---------------------------- 226
               + LF +M +    PDE TF S L  C                              
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYAC 638

Query: 227 ----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD-----FYVKCGCLVEARRVFDLI 277
               LG  G   + H F+     P +    + G+L++       +  G L  A+ +F+L 
Sbjct: 639 VVDLLGRAGELQEAHKFI--QKMPVTPDPAVWGALLNACRIHHKIDLGEL-SAQHIFEL- 694

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           ++KSV  +  L   YA      E  ++ R ++E  L VD           A  + VE   
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD-----------AGCSWVEVKG 743

Query: 338 QIHAYAAKVPSGLDTSVSNSIVD 360
           ++HA+ +       T   N++++
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLE 766



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 35/287 (12%)

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           G      L EAM+L   ++E  + VD  V  +++ +       E+G ++++ A    S L
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
              + N+ + M+++ G + +A  +F +M  +N+ +W V++ GY K G   EA+ L+ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187

Query: 411 -LDDVEPDGVAYLAVLSACS-----------HSGLVEESQEY------------------ 440
            +  V+PD   +  VL  C            H  +V    E                   
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 441 -FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSAC 496
             +RL  D+  +  I  ++ ++      G   E   L  +M    V P +    +++SAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYV-MMSNIHADAGSWNECERL 542
            + GD  LGR++   ++       ++    ++ ++ +AGSW E E+L
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/665 (35%), Positives = 375/665 (56%), Gaps = 9/665 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q H  L++     + + ++ LI   A    G++N A  +F +M   +      ++ G+ +
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + N    +SL+  M    V  + +T    + A   L +V+ G + H   +K+GF  +  V
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I  Y  CG    A  +FD    + ++TWN MI  ++  G S+K   L  +M +   
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           + PDE T  S + AC  LG++  G  +H +    G   +++  +  +++D Y KC  +  
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLR--VNNAILDMYCKCDDIES 266

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A+ VF+ I +K V+SW+S++ G A+     EA+ LF++++   +++D   L  ++   A 
Sbjct: 267 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++QGK IH    K     D  +  ++VDMY KCG ID A ++F  M V+NV TW  +
Sbjct: 327 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 386

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I G   HG  ++A+ LF +M  D + PD V ++A+L ACSH+GLV+E    F  + N  +
Sbjct: 387 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 446

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++PR+EHY C+VD L RA ++D+A   IE+MP+K +  +W TLL ACR  G  +L  ++G
Sbjct: 447 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIG 506

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             ++ L+ D+   YVM+SN++A    W+   +LRK  ++KG++K  G SW+E++  IH F
Sbjct: 507 RRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQF 566

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +H  TE+I+ ++ EM +R+  + G V G    L DI+EE KE SL +HSEKLAI 
Sbjct: 567 VAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIA 626

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           L L+    +   G  IR+ KNLRVC DCH F+K  SK+     V RD +RFH F+ G CS
Sbjct: 627 LGLI----STPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCS 682

Query: 690 CGDYW 694
           C D+W
Sbjct: 683 CMDFW 687



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 202/413 (48%), Gaps = 11/413 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   +  G + H  ++K GF  DL + N LI  Y  CG    AC VFD+   R+V
Sbjct: 118 LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDV 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W  ++   L  G ++    L  +M    +++P+E T+ + + A   L ++E G  +H 
Sbjct: 178 VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHS 237

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              + G + N  V N+I+DMY KC  I  A  +F+ +  K +++W +M++G   +GY  +
Sbjct: 238 YSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQE 297

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LF+KMQ +    DE T    L AC   G++  G  IH  L+   F  +   V+  +L
Sbjct: 298 ALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIH--LLIDKFEINCDLVLETAL 355

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y KCG +  A +VF  +  ++V +W++LI G A   +  +A+ LF Q+    L  D 
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415

Query: 318 FVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               +++   +   LV++G     A   K            +VD+  +   +D+A     
Sbjct: 416 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIE 475

Query: 377 EMPVK-NVVTWTVIITG--YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MP+K N V W  ++     G H    E +G  R+++  ++EPD      +LS
Sbjct: 476 NMPIKANSVLWATLLGACRSGGHFDLAEKIG--RRVI--ELEPDSCGRYVMLS 524



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 158/303 (52%), Gaps = 26/303 (8%)

Query: 5   SFSLVSERQRLADSLR-----------CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDL 53
           +F L+ E  +L D+LR            C++   L+ G  LH    ++G   +L +NN +
Sbjct: 196 AFDLLDEMTKL-DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAI 254

Query: 54  IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE 113
           +DMY KC ++  A  VF+++ E++V+SWT+++ G  ++G  +  L+LF +M  + ++ +E
Sbjct: 255 LDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDE 314

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
            TL   + A     +++ G  IH +  K     + V+  +++DMY+KCG I+ A ++F  
Sbjct: 315 ITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRR 374

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           M  +++ TWNA+I G  + G+ +  + LF +M+    +PD+ TF + L AC   G V  G
Sbjct: 375 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD---LIEQKSV----ISWS 286
             +    + + F    +    G +VD       L  AR+V D    IE   +    + W+
Sbjct: 435 LAMFQ-AMKNKFQIEPRMEHYGCVVDL------LCRARKVDDALAFIENMPIKANSVLWA 487

Query: 287 SLI 289
           +L+
Sbjct: 488 TLL 490



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   LD G  +H  + K   + DL+L   L+DMYAKCG ++ A  VF +M 
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNV +W AL+ G   +G+ +  +SLF QM    + P++ T    + A      V+ G+ 
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
           +    MK+ F+  P + +   ++D+  +  ++++A    + MP K+  + W  ++     
Sbjct: 437 MF-QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRS 495

Query: 192 AGYSDKGLLLFRKMQE 207
            G+ D    + R++ E
Sbjct: 496 GGHFDLAEKIGRRVIE 511


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/608 (38%), Positives = 363/608 (59%), Gaps = 12/608 (1%)

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N N+   L +   + + S++P+    +  +K   +L  ++ G  +H   M S F  + V+
Sbjct: 69  NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG---LLLFRKMQE 207
            NSI+ MY+KCG +  A ++FD M  K ++TW +MI GY   GY+      L+LF +M  
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P+EF  +S +K CG LGS   G QIHG     GF  +V   +  SLVD Y +CG L
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENV--FVGSSLVDMYARCGEL 246

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            E+R VFD +E K+ +SW++LI G+A++    EA+ LF +++        F  S+++   
Sbjct: 247 RESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSS 306

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +    +EQGK +HA+  K    L   V N+++ MY K G I +A ++F+ +   +VV+  
Sbjct: 307 STTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCN 366

Query: 388 VIITGYGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
            ++ GY +HGL KEAV LF +M+L  ++EP+ + +L+VL+ACSH+GL++E   YF  L  
Sbjct: 367 SMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF-ELMK 425

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              ++P++ HY+ +VD  GRAG LD+AK+ IE MP++P+  IW  LL A ++H + E+G 
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGA 485

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              + +L LD   P  + ++SNI+A AG W +  ++RK  +  GLKK    SWVE++  +
Sbjct: 486 YAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSV 545

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
           H F   D +HP   K++++   + +++K E+G+V    +    + ++ KE +L+ HSEKL
Sbjct: 546 HIFSANDISHPQKNKVYEMWENLNQKIK-EIGYVPDTSHVHVFVDQQEKELNLQYHSEKL 604

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           A+  AL    LN +PG VIR+ KN+RVCGDCH  IK +S ++K   +VRD  RFH F  G
Sbjct: 605 ALAFAL----LNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDG 660

Query: 687 VCSCGDYW 694
            CSC DYW
Sbjct: 661 SCSCRDYW 668



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 239/429 (55%), Gaps = 12/429 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  +R      L+ C+    L  G  +H  L+   F  DL++ N ++ MYAKCG +  A
Sbjct: 86  SLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIA 145

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNG---NAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             VFD+M  ++VV+WT+++ G+ Q+G   +A   L LF +M    ++PNEF LS+ +K  
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
           G L S  +G QIHG C K GF+ N  VG+S++DMY++CG + E+  +FD + +K+ ++WN
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           A+I+G+   G  ++ L LF KMQ  G    EFT+++ L +  + GS+  G  +H  ++ S
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G    +   +  +L+  Y K G + +A++VFD + +  V+S +S+++GYAQ     EA+E
Sbjct: 326 G--KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVE 383

Query: 304 LFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           LF ++     ++ +     S++   +   L+++G  ++ +      GL+  +S+  ++VD
Sbjct: 384 LFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEG--LYYFELMKKYGLEPKLSHYTTVVD 441

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDG 418
           ++ + GL+D+A     EMP++ N   W  ++     H   +      +K+L LD   P  
Sbjct: 442 LFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGA 501

Query: 419 VAYLAVLSA 427
              L+ + A
Sbjct: 502 HTLLSNIYA 510


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 385/674 (57%), Gaps = 14/674 (2%)

Query: 27  LLDYGV------QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           LLD+ V      Q+H  LV  G      L    ++     GE+  A  VFD+  E +V  
Sbjct: 77  LLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFL 136

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W A++ G+  +      + ++ +M +S V P+ FTL   +KA   +  +E G ++HG   
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           + GFE +  V N ++ +Y+KCGR+ +A  +F+ +  +++++W +MI+GY   G   + L 
Sbjct: 197 RLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALR 256

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F +M++    PD     S L+A   +  +  G  IHG ++  G  +    +I  SL   
Sbjct: 257 IFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAM 314

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG ++ AR  FD +E  +V+ W+++I GYA+     EA+ LF+++  ++++ D   +
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S +   A    ++  K +  Y  K     D  V+ +++DM+ KCG +D A E+F+    
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD 434

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K+VV W+ +I GYG HG  ++A+ LF  M    V P+ V ++ +L+AC+HSGLVEE  E 
Sbjct: 435 KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWEL 494

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +     ++ R +HY+C+VD LGR+G L+EA + I +MP++P +++W  LL AC+++ 
Sbjct: 495 FHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYR 553

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
            + LG    E L  LD  N  +YV +SN++A +  W+   ++R L R KGL K  G S +
Sbjct: 554 HVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLI 613

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           E++ ++  F  GD +HP  ++I + L  +E+R+KE  GF+  ++  LHD+ +E KEE+L 
Sbjct: 614 EINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEA-GFIPHIESVLHDLNQEEKEETLC 672

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSE+LAI   L+    +  PG  +R+ KNLR C +CH   K +SK++    VVRDA RF
Sbjct: 673 NHSERLAIAYGLI----STAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRF 728

Query: 681 HRFEGGVCSCGDYW 694
           H F+ GVCSC DYW
Sbjct: 729 HHFKNGVCSCRDYW 742



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 202/375 (53%), Gaps = 7/375 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS   +L+ G ++HG + ++GF  D+ + N L+ +YAKCG +  A  VF+ + +RN+
Sbjct: 176 LKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNI 235

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G+ QNG     L +F QM   +VKP+   L + ++A   +  +E G  IHG 
Sbjct: 236 VSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGC 295

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E+ P +  S+  MY+KCG++  A   FD M   +++ WNAMI+GY   GY+++ 
Sbjct: 296 VVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEA 355

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF++M       D  T  S + AC  +GS+     +  ++  +   Y     +  +L+
Sbjct: 356 VGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKT--EYRNDVFVNTALI 413

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D + KCG +  AR VFD    K V+ WS++I+GY       +A++LF  +++  +  +  
Sbjct: 414 DMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDV 473

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++       LVE+G ++  + +    G++    +   +VD+  + G ++EA +   
Sbjct: 474 TFVGLLTACNHSGLVEEGWEL--FHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFIT 531

Query: 377 EMPVK-NVVTWTVII 390
            MP++  V  W  ++
Sbjct: 532 TMPIEPGVSVWGALL 546



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 1/186 (0%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S ++ ++   +  ++  C++   LD    +   + K  +  D+ +N  LIDM+AKCG +
Sbjct: 363 ISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSV 422

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           + A  VFD+ L+++VV W+A++ G+  +G  +  + LF  M  + V PN+ T    + A 
Sbjct: 423 DLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTAC 482

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-W 182
                VE G ++       G E        ++D+  + G +NEA      MP +  ++ W
Sbjct: 483 NHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVW 542

Query: 183 NAMIAG 188
            A++  
Sbjct: 543 GALLGA 548


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 392/697 (56%), Gaps = 17/697 (2%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLD---------YGVQLHGALVKMGFSFDLMLNNDLID 55
           SF + S  +R  D +   + + LL          +G  +HG +VKMGF   + + N L+ 
Sbjct: 228 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 287

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MYA  G    A  VF +M  ++++SW +LM  F+ +G +   L L C M SS    N  T
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            ++ + A       E G  +HG+ + SG  +N ++GN+++ MY K G ++E+ R+   MP
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGT 234
            + ++ WNA+I GY      DK L  F+ M+  G   +  T  S L AC   G +   G 
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
            +H +++++GF       +  SL+  Y KCG L  ++ +F+ ++ +++I+W++++   A 
Sbjct: 468 PLHAYIVSAGFESDEH--VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
             +  E ++L  ++R   + +D F  S  +   A  A++E+G+Q+H  A K+    D+ +
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+  DMY KCG I E  ++      +++ +W ++I+  G+HG  +E    F +ML   +
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P  V ++++L+ACSH GLV++   Y+  +  D  ++P IEH  C++D LGR+GRL EA+
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             I  MP+KP+  +W++LL++C++HG+L+ GR+  E L +L+ ++   YV+ SN+ A  G
Sbjct: 706 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 765

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W + E +RK    K +KK    SWV++  ++  F  GD THP T +I+  L +++K +K
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 825

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           E  G+V     AL D  EE KE +L  HSE+LA+  AL    ++   G  +R+FKNLR+C
Sbjct: 826 ES-GYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL----MSTPEGSTVRIFKNLRIC 880

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
            DCH   K +S+++    V+RD  RFH FE G+   G
Sbjct: 881 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 248/493 (50%), Gaps = 15/493 (3%)

Query: 18  SLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           SL   S  LL D   G Q+ G +VK G    L + N LI M    G ++ A  +FD+M E
Sbjct: 147 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+ +SW ++   + QNG+ +    +F  M     + N  T+ST +   G +   + G  I
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 266

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +K GF+    V N+++ MY+  GR  EA  +F  MP K LI+WN+++A +V  G S
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              L L   M   G+  +  TFTS L AC +      G  +HG ++ SG  Y+   +I  
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN--QIIGN 384

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y K G + E+RRV   + ++ V++W++LI GYA++E+  +A+  F+ +R   +  
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444

Query: 316 DGF-VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
           +   V+S +        L+E+GK +HAY        D  V NS++ MY KCG +  + +L
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN +  +N++TW  ++     HG  +E + L  KM    V  D  ++   LSA +   ++
Sbjct: 505 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 564

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           EE Q+      +   +K   EH S I     D   + G + E   ++    V  S+  W 
Sbjct: 565 EEGQQ-----LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWN 618

Query: 491 TLLSACRVHGDLE 503
            L+SA   HG  E
Sbjct: 619 ILISALGRHGYFE 631



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 244/503 (48%), Gaps = 22/503 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     +   GVQ+HG + K G   D+ ++  ++ +Y   G ++ +  VF++M +RNVVS
Sbjct: 51  CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 110

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM G+   G  +  + ++  M    V  NE ++S  I + G+L     G QI G  +
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG E    V NS+I M    G ++ A  +FD M  +  I+WN++ A Y   G+ ++   
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F  M+   +  +  T ++ L   G +     G  IHG ++  GF   V   +  +L+  
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV--CVCNTLLRM 288

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y   G  VEA  VF  +  K +ISW+SL+  +  +    +A+ L   +      V+    
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +S +         E+G+ +H     V SGL  +  + N++V MY K G + E+  +  +M
Sbjct: 349 TSALAACFTPDFFEKGRILHGLV--VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG-LVEES 437
           P ++VV W  +I GY +     +A+  F+ M ++ V  + +  ++VLSAC   G L+E  
Sbjct: 407 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466

Query: 438 QEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           +   + +      +D+ +K      + ++    + G L  +++L   +  + +I  W  +
Sbjct: 467 KPLHAYIVSAGFESDEHVK------NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAM 519

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           L+A   HG    G EV +++ ++
Sbjct: 520 LAANAHHGH---GEEVLKLVSKM 539



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 207/422 (49%), Gaps = 5/422 (1%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV-EN 131
           M  RN VSW  +M G ++ G     +  F +M    +KP+ F +++ + A G   S+   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G+Q+HG   KSG   +  V  +I+ +Y   G ++ + ++F+ MP +++++W +++ GY  
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  ++ + +++ M+  G   +E + +  + +CG L     G QI G ++ SG     K 
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL--ESKL 178

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+      G +  A  +FD + ++  ISW+S+   YAQ  ++ E+  +F  +R  
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
             +V+   +S+++ V       + G+ IH    K+       V N+++ MY   G   EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F +MP K++++W  ++  +   G + +A+GL   M+      + V + + L+AC   
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
              E+ +     +        +I   + +V   G+ G + E++ ++  MP +  +A W  
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNA 416

Query: 492 LL 493
           L+
Sbjct: 417 LI 418



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 231/506 (45%), Gaps = 69/506 (13%)

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GG 232
           MP ++ ++WN M++G V  G   +G+  FRKM + G  P  F   S + ACG  GS+   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G Q+HGF+  SG    V   ++ +++  Y   G +  +R+VF+ +  ++V+SW+SL++GY
Sbjct: 61  GVQVHGFVAKSGLLSDV--YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLS---SMMGVFADFALVEQGKQIHAYAAKVPSG 349
           + +    E +++++ +R   +  +   +S   S  G+  D +L   G+QI     K  SG
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQIIGQVVK--SG 173

Query: 350 LDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
           L++  +V NS++ M    G +D A  +F++M  ++ ++W  I   Y ++G  +E+  +F 
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR- 466
            M     E +      +LS   H        + + R  +   +K   +   C+ ++L R 
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHV-----DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 288

Query: 467 ---AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE---VGEILLRLDGDNP 520
              AGR  EA  + + MP K  I+ W +L+++      +  GR    +G +   +     
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLIS-WNSLMASF-----VNDGRSLDALGLLCSMISSGKS 342

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
           VNYV  ++  A   + +  E+ R L    GL  V+G            FY         +
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRIL---HGLVVVSG-----------LFY--------NQ 380

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG-GLNE 639
            I   L+ M  ++ E                 ES+   L++    +    AL+ G   +E
Sbjct: 381 IIGNALVSMYGKIGE---------------MSESRRVLLQMPRRDVVAWNALIGGYAEDE 425

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLS 665
            P K +  F+ +RV G    +I  +S
Sbjct: 426 DPDKALAAFQTMRVEGVSSNYITVVS 451


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/789 (31%), Positives = 410/789 (51%), Gaps = 118/789 (14%)

Query: 13  QRLADSLRCCS--KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
            R A +LR C   +   L     +HG ++  GF     + N LID+Y K  E+N A  +F
Sbjct: 13  NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72

Query: 71  DKMLE---------------------------------RNVVSWTALMCGFLQNGNAKAC 97
           D++ E                                 R+ V + A++ GF  N +  + 
Sbjct: 73  DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHGMCMKSGFEWNPVVGNSIID 156
           ++LFC+M     KP+ FT ++ +    +++  E   +Q H   +KSG  +   V N+++ 
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVS 192

Query: 157 MYSKCGR----INEAARMFDVMPAKS--------------------------------LI 180
           +YSKC      ++ A ++FD +  K                                 L+
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            +NAMI+GYV  G+  + L + R+M   G   DEFT+ S ++AC + G +  G Q+H ++
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312

Query: 241 IT-SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +    F +        SLV  Y KCG   EAR +F+ +  K ++SW++L+ GY    ++ 
Sbjct: 313 LRREDFSFHFDN----SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 300 EAMELFRQLRERS--------------------------LQVDGF-----VLSSMMGVFA 328
           EA  +F++++E++                          ++ +GF       S  +   A
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                  G+Q HA   K+  G D+S+S  N+++ MY KCG+++EA ++F  MP  + V+W
Sbjct: 429 VLGAYCNGQQYHAQLLKI--GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I   G+HG   EAV ++ +ML   + PD +  L VL+ACSH+GLV++ ++YF  +  
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
             R+ P  +HY+ ++D L R+G+  +A+++IES+P KP+  IW+ LLS CRVHG++ELG 
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              + L  L  ++   Y+++SN+HA  G W E  R+RKL R +G+KK    SW+E++ ++
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEK 625
           H F   D +HP  E ++  L ++ K M+  LG+V    + LHD++ +  KE+ L  HSEK
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMR-RLGYVPDTSFVLHDVESDGHKEDMLTTHSEK 725

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           +A+   L++      PG  IR+FKNLR CGDCH F + LS +++   ++RD  RFH F  
Sbjct: 726 IAVAFGLMK----LPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRN 781

Query: 686 GVCSCGDYW 694
           G CSCG++W
Sbjct: 782 GECSCGNFW 790


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/683 (36%), Positives = 384/683 (56%), Gaps = 60/683 (8%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL+  N +I    +   +  A  +FD+M ER+VVSW A++ G+ QNG  K    +F +M 
Sbjct: 110 DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM- 168

Query: 106 SSSVKPNEFTLSTNIKASGVLSS-VENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                P + ++S N    G+L++ V+NG ++      +S  +W  +  N ++  Y K  R
Sbjct: 169 -----PCKNSISWN----GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNR 219

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A  +FD MP +  ++WN MI+GY   G     LL  +++ E   + D FT+T+ +  
Sbjct: 220 LVDARGIFDRMPERDEVSWNTMISGYAQNG----ELLEAQRLFEESPVRDVFTWTAMVS- 274

Query: 224 CGSLGSVGGGTQIHGFLITSGFP----YSVKTVIAG------------------------ 255
               G V  G       +  G P     S   +IAG                        
Sbjct: 275 ----GYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS 330

Query: 256 --SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +++  Y + G + +AR  FD + Q+  ISW+++I GYAQ     EA+ LF +++    
Sbjct: 331 WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE 390

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEA 371
           +++    +S +   A+ A +E GKQ+H    K  +GL++   V N+++ MY KCG ID+A
Sbjct: 391 RLNRSTFTSTLSTCAEIAALELGKQVHGRVVK--AGLESGCYVGNALLVMYCKCGNIDDA 448

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F  +  K VV+W  +I GY +HG  KEA+ LF  M    + PD V  + VLSACSH+
Sbjct: 449 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHT 508

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV++  EYF  +  D  +    +HY+C++D LGRAGRLD+A+NL+++MP +P  A W  
Sbjct: 509 GLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 568

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL A R+HG+ ELG +  +++  ++ DN   YV++SN++A +G W +  R+R   R +G+
Sbjct: 569 LLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 628

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KKV G SWVEV  +IH F  GD  HP  ++I+  L E++ +MK+E G+V   K  LHD++
Sbjct: 629 KKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKE-GYVSSTKLVLHDVE 687

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           EE K   L+ HSEKLA+   +    L    G+ IRV KNLRVC DCH  +K +SKI+  +
Sbjct: 688 EEEKVHMLKYHSEKLAVAFGI----LAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRL 743

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            ++RD+ RFH F GG CSCGDYW
Sbjct: 744 IILRDSHRFHHFNGGQCSCGDYW 766



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 200/417 (47%), Gaps = 49/417 (11%)

Query: 45  FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
           ++L+  N ++  Y K   +  A  +FD+M ER+ VSW  ++ G+ QNG       LF + 
Sbjct: 202 WELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEES 261

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGM------QIHGMCMKSGFEWNPVVG------- 151
               V    FT +  +  SG    V+NGM         GM  K+   WN ++        
Sbjct: 262 PVRDV----FTWTAMV--SGY---VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR 312

Query: 152 -------------------NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
                              N++I  Y++ G I +A   FD MP +  I+W A+IAGY  +
Sbjct: 313 MDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQS 372

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           GY ++ L LF +M+  GE  +  TFTSTL  C  + ++  G Q+HG ++ +G        
Sbjct: 373 GYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGC--Y 430

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +L+  Y KCG + +A  VF+ IE+K V+SW+++I GYA+     EA+ LF  +++  
Sbjct: 431 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 490

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
           +  D   +  ++   +   LV++G + + Y+     G+  +  +   ++D+  + G +D+
Sbjct: 491 ILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 549

Query: 371 ATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           A  L   MP + +  TW  ++     HG     +G     ++ ++EPD      +LS
Sbjct: 550 AQNLMKNMPFEPDAATWGALLGASRIHG--NTELGEKAAKMIFEMEPDNSGMYVLLS 604



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 171/353 (48%), Gaps = 39/353 (11%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           +WN  + N +     + G+ + A R+F+ MP +S I+WNAMI+G +    S+    L R+
Sbjct: 51  KWNIAITNHM-----RNGQCDSALRLFNSMPRRSSISWNAMISGCL----SNDKFYLARQ 101

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           + E     D  ++   +  C    ++         L+    P     V   +++  Y + 
Sbjct: 102 LFEKMPTRDLVSWNVMISGCVRYRNLRAAR-----LLFDQMP-ERDVVSWNAMLSGYAQN 155

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G + EA+ +FD +  K+ ISW+ ++  Y Q   + +A  LF    +  L       + MM
Sbjct: 156 GYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL----ISWNCMM 211

Query: 325 GVFADFALVEQGKQIHAYAA--KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           G +     V++ + + A     ++P   + S  N+++  Y + G + EA  LF E PV++
Sbjct: 212 GGY-----VKRNRLVDARGIFDRMPERDEVSW-NTMISGYAQNGELLEAQRLFEESPVRD 265

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           V TWT +++GY ++G+  EA  +F  M     E + V++ A+++       +++++E F 
Sbjct: 266 VFTWTAMVSGYVQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQARELFE 321

Query: 443 RL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + C +      +  ++ ++    + G + +A+N  + MP + SI+ W  +++
Sbjct: 322 AMPCQN------VSSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS-WAAIIA 367



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R     +L  C++   L+ G Q+HG +VK G      + N L+ MY KCG ++ A  VF+
Sbjct: 394 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 453

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E+ VVSW  ++ G+ ++G  K  L LF  M  + + P++ T+   + A      V+ 
Sbjct: 454 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 513

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGY 189
           G +  + M    G   N      +ID+  + GR+++A  +   MP      TW A++   
Sbjct: 514 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 573

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 574 RIHGNTELG 582


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/686 (36%), Positives = 376/686 (54%), Gaps = 14/686 (2%)

Query: 16  ADSLRCCSKNLL----LDYGVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           AD+L    KN +    +  G  +H  +VK +       L N LI+MY+K      A  V 
Sbjct: 6   ADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
                RNVVSWT+L+ G  QNG+    L  F +M    V PN+FT     KA   L    
Sbjct: 66  RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPV 125

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIH + +K G   +  VG S  DMY K    ++A ++FD +P ++L TWNA I+  V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSV 185

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G   + +  F + +  G  P+  TF   L AC     +  G Q+HG +  SGF   V 
Sbjct: 186 TDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVS 245

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +   L+DFY KC  +  +  +F  +  K+ +SW SL+  Y Q     +A  L+ + R+
Sbjct: 246 --VYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++   F++SS++   A  A +E G+ IHA+A K     +  V +++VDMY KCG I++
Sbjct: 304 EIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIED 363

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV--EPDGVAYLAVLSAC 428
           + + F+EMP KN+VT   +I GY   G    A+ LF  M        P+ + ++++LSAC
Sbjct: 364 SEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSAC 423

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S +G VE   + F  + +   ++P  EHYSCIVD LGRAG +++A   I+ MP+KP+I++
Sbjct: 424 SRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISV 483

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  L +ACR+HG   LG    E L +LD  +  N+V++SN  A AG W E   +R+  + 
Sbjct: 484 WGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKG 543

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
            G+KK AG SW+ V  ++H F   D +H + ++I  +L ++  +M E  G+   +K +L+
Sbjct: 544 VGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKM-EAAGYKPDLKLSLY 602

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EE K   +  HSEKLA+   LV   L+      IR+ KNLR+CGDCH F K +S  +
Sbjct: 603 DLEEEEKAAEVSHHSEKLALAFGLVALPLSVP----IRITKNLRICGDCHSFFKFVSGSV 658

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           K   +VRD  RFHRF+ G+CSC DYW
Sbjct: 659 KREIIVRDNNRFHRFKDGICSCKDYW 684



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 6/191 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C+    L+ G  +H   VK     ++ + + L+DMY KCG +  +   FD+M 
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP 372

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKASGVLSSVENG 132
           E+N+V+  +L+ G+   G     L+LF  M        PN  T  + + A     +VENG
Sbjct: 373 EKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENG 432

Query: 133 MQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGY 189
           M+I    MKS +   P   +   I+DM  + G + +A      MP K  I+ W A+    
Sbjct: 433 MKIFD-SMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNAC 491

Query: 190 VLAGYSDKGLL 200
            + G    G+L
Sbjct: 492 RMHGKPHLGIL 502


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/670 (35%), Positives = 378/670 (56%), Gaps = 9/670 (1%)

Query: 25   NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTAL 84
             L L +GV  H    K+G   +  + + LID Y+ CG ++ A  VFD ++ ++ V+WTA+
Sbjct: 546  TLGLAWGV--HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAM 603

Query: 85   MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
            +  + +N   +  L +F +M  +  K N F L++ ++A+  LSSV  G  IH   +K+ +
Sbjct: 604  VSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY 663

Query: 145  EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
            +    V  +++DMY+KCG I +A   F+++    +I W+ MI+ Y     +++   LF +
Sbjct: 664  DTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIR 723

Query: 205  MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            M      P+EF+ +S L+AC ++  +  G QIH   I  G  +  +  +  +L+D Y KC
Sbjct: 724  MMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIG--HESELFVGNALIDLYAKC 781

Query: 265  GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
              +  +  +F  +   + +SW+++I+GY++      A+ +FR++R  S+       SS++
Sbjct: 782  SDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVL 841

Query: 325  GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
               A  A +    Q+H    K     DT VSNS++D Y KCG I +A E+F  +   ++V
Sbjct: 842  RACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLV 901

Query: 385  TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
            +W  II+GY  HG A  A  LF  M  + ++ + + ++A+LS C  +GLV +    F  +
Sbjct: 902  SWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSM 961

Query: 445  CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
              D  ++P +EHY+CIV  LGRAGRL++A N I  +P  PS  +W+ LLS+C VH ++EL
Sbjct: 962  RLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVEL 1021

Query: 505  GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
            GR   E +L ++  +   YV++SN+++ AGS ++    RK  R+ G++K  G SWVE+  
Sbjct: 1022 GRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKG 1081

Query: 565  EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            E+H F  G + HP    I+ +L  +  +   E G+V      LHD++EE K   L VHSE
Sbjct: 1082 EVHAFSVGSEDHPCMRVINAMLEWLNLKAIRE-GYVPDTDEVLHDLEEEQKVRMLWVHSE 1140

Query: 625  KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
            +LA+   LV       PG  IR+ KNLR C DCH   K +SKI+K   +VRD  RFH FE
Sbjct: 1141 RLALAYGLVM----TPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFE 1196

Query: 685  GGVCSCGDYW 694
             G CSCGDYW
Sbjct: 1197 EGTCSCGDYW 1206



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 249/484 (51%), Gaps = 6/484 (1%)

Query: 31  GVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +HG +V+ G     DL   N L++MY K G    A  VFD + ERN+VS+  L+ G 
Sbjct: 447 GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
              G  +   +LF ++     + N+F L+T +K    + ++     +H    K G + N 
Sbjct: 507 ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG+++ID YS CG +++A R+FD +  K  + W AM++ Y      +  L +F KM+  
Sbjct: 567 FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               + F  TS L+A   L SV  G  IH   + +   Y  +  + G+L+D Y KCG + 
Sbjct: 627 VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTL--YDTERHVYGALLDMYAKCGNIE 684

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR  F+++    VI WS +I  YAQ     +A ELF ++   S+  + F LSS++   A
Sbjct: 685 DARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA 744

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           +  L++ GKQIH +A K+    +  V N+++D+Y KC  ++ + E+F+ +   N V+W  
Sbjct: 745 NMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNT 804

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           II GY K G  + A+ +FR+M    V    V Y +VL AC+ +  +    +    +    
Sbjct: 805 IIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKST 864

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                I   S ++DS  + G + +A+ + E++  +  +  W  ++S   VHG   + +E+
Sbjct: 865 FNSDTIVSNS-LIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMAQEL 922

Query: 509 GEIL 512
            +++
Sbjct: 923 FDMM 926



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 224/419 (53%), Gaps = 11/419 (2%)

Query: 22   CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
            C  +++L  G+  H   VK  +  +  +   L+DMYAKCG +  A   F+ +   +V+ W
Sbjct: 644  CLSSVVLGKGI--HACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILW 701

Query: 82   TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            + ++  + Q    +    LF +M  SSV PNEF+LS+ ++A   +  ++ G QIH   +K
Sbjct: 702  SLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIK 761

Query: 142  SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
             G E    VGN++ID+Y+KC  +  +  +F  +   + ++WN +I GY  +G+ +  L +
Sbjct: 762  IGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSV 821

Query: 202  FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
            FR+M+       + T++S L+AC S  S+    Q+H  +  S F  +  T+++ SL+D Y
Sbjct: 822  FREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTF--NSDTIVSNSLIDSY 879

Query: 262  VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
             KCGC+ +AR +F+ +++  ++SW+++I GYA     A A ELF  + + S++ +     
Sbjct: 880  AKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFV 939

Query: 322  SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
            +++ V     LV QG  +   + ++  G++ S+ +   IV +  + G +++A     ++P
Sbjct: 940  ALLSVCGSTGLVSQGLSLFD-SMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIP 998

Query: 380  -VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEE 436
               + + W  +++    H   +  +G F    + ++EP D   Y+ + +  S +G +++
Sbjct: 999  SAPSAMVWRALLSSCIVHKNVE--LGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQ 1055



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 129/222 (58%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+ C+   LLD G Q+H   +K+G   +L + N LID+YAKC +M  +  +F  + 
Sbjct: 736 LSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLR 795

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + N VSW  ++ G+ ++G  +A LS+F +M ++SV   + T S+ ++A    +S+ +  Q
Sbjct: 796 DVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQ 855

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H +  KS F  + +V NS+ID Y+KCG I +A  +F+ +    L++WNA+I+GY + G 
Sbjct: 856 VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQ 915

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +     LF  M ++    ++ TF + L  CGS G V  G  +
Sbjct: 916 AAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSL 957



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 142/285 (49%), Gaps = 8/285 (2%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D + +   L+ C + G   GG  +HG ++ SG    +    A  L++ Y K G    A R
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD + +++++S+ +L+ G+A      EA  LF++LR    +V+ FVL++++ +      
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +     +HA A K+    +  V ++++D Y  CG++ +A  +F+ +  K+ V WT +++ 
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA--CSHSGLVEESQEYFSRLCNDKRM 450
           Y ++   +  + +F KM +   + +  A  +VL A  C  S ++ +        C+ K +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH----ACSVKTL 662

Query: 451 KPRIEH-YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
                H Y  ++D   + G +++A+   E M     + +W  ++S
Sbjct: 663 YDTERHVYGALLDMYAKCGNIEDARLAFE-MVTNDDVILWSLMIS 706



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 6/230 (2%)

Query: 7    SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
            S+ S +   +  LR C+    +++  Q+H  + K  F+ D +++N LID YAKCG +  A
Sbjct: 829  SVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDA 888

Query: 67   CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              +F+ + E ++VSW A++ G+  +G A     LF  M  +S+K N+ T    +   G  
Sbjct: 889  REIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGST 948

Query: 127  SSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNA 184
              V  G+ +   M +  G E +      I+ +  + GR+N+A     D+  A S + W A
Sbjct: 949  GLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRA 1008

Query: 185  MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF---TSTLKACGSLGSVG 231
            +++  ++    + G     K+ E  E  DE T+   ++   A GSL  V 
Sbjct: 1009 LLSSCIVHKNVELGRFSAEKVLE-IEPQDETTYVLLSNMYSAAGSLDQVA 1057


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 385/694 (55%), Gaps = 14/694 (2%)

Query: 3   RVSFSLVSERQRLADSLRCCS--KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           R + +L  +    A ++  CS  K+L+L     LH   +  G+  ++ + + L+D+Y K 
Sbjct: 102 RRNTNLSPDNFTYAFAVAACSNDKHLML-----LHAHSIIDGYGSNVFVGSALVDLYCKF 156

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
             +  A  VFD M ER+ V W  ++ G ++N      + LF +M +  V+ +  T++  +
Sbjct: 157 SRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVL 216

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            A+  L  ++ GM I  + +K GF +   V   +I +YSKCG +N A  +F  +    LI
Sbjct: 217 PAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLI 276

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            +NAMI+G+   G ++  + LFR++   GE     T    +      G +     IHGF 
Sbjct: 277 AYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFC 336

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           + SG    +   ++ +    Y K   +  AR +FD   +K+V++W+++I GY Q  +   
Sbjct: 337 VKSGI--ILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET 394

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ LF+++ +     +   +++++   A    +  GK +H          +  VS ++VD
Sbjct: 395 AISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVD 454

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG I EA +LF+ M  KN VTW  +I GYG HG   EA+ L+ +ML     P  V 
Sbjct: 455 MYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVT 514

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +L+VL ACSH+GLV E +E F  + N  R++P IEHY+C+VD LGR+G+L++A   I+ M
Sbjct: 515 FLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKM 574

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           PV+P  A+W TLL AC +H D ++ R   E L  LD  +   YV++SNI++   ++ +  
Sbjct: 575 PVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAA 634

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            +R++ + + L K  G + +EV+   H F  GD +H     I+  L ++  +M+ E+G+ 
Sbjct: 635 SIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMR-EMGYQ 693

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
                ALHD++EE KE ++ VHSEKLAI   L+      +PG  IR+ KNLRVC DCH  
Sbjct: 694 AETVPALHDVEEEEKELAVNVHSEKLAIAFGLI----TTEPGNEIRIIKNLRVCLDCHTA 749

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K +SKI + V VVRDA RFH F+ G+CSCGDYW
Sbjct: 750 TKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 242/500 (48%), Gaps = 9/500 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H   +  G+ FDL     L            A A+F  + + ++  +  L+ GF  N 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 93  NAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           +  + +SL+  +  ++++ P+ FT +  + A    S+ ++ M +H   +  G+  N  VG
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC---SNDKHLMLLHAHSIIDGYGSNVFVG 146

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++++D+Y K  R+  A ++FD MP +  + WN MI G V     D  + LFR+M   G  
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D  T T+ L A   L  +  G  I    +  GF +    V+ G L+  Y KCG +  AR
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGF-CDYVLTG-LISLYSKCGDVNTAR 264

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F  I +  +I+++++I G+        +++LFR+L     +V    +  ++ + + F 
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFG 324

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +     IH +  K    L+ +VS +   +Y K   ID A  LF+E P K VV W  +I+
Sbjct: 325 HLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY ++G  + A+ LF++M+  +  P+ V    +LSAC+  G +   + +   L   + ++
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK-WVHHLIKSENLE 443

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P I   + +VD   + G + EA  L +SM  K ++  W T++    +HG      ++   
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT-WNTMIFGYGLHGYGHEALKLYNE 502

Query: 512 LLRLDGDNPVNYVMMSNIHA 531
           +L L G NP     +S ++A
Sbjct: 503 MLHL-GYNPSAVTFLSVLYA 521


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/669 (36%), Positives = 372/669 (55%), Gaps = 14/669 (2%)

Query: 31  GVQLHGALVKMGFS-FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G  +H  +++   +     L+N L++MY+K   +N A  V      R VV+WT+L+ G +
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            N      L  F  M   +V+PN+FT     KAS  +     G QIHG+ +K G  ++  
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK-MQEH 208
           VG S  DMY K G   +A  MFD MP ++L TWNA I+  V    S   ++ F++ +  H
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           GE P+  TF + L AC  +  +  G Q+H F++  G+   V   +A  L+DFY KCG +V
Sbjct: 205 GE-PNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS--VANGLIDFYGKCGDIV 261

Query: 269 EARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            A  VF+ I  +K+V+SW S++    Q      A  +F Q R+     D F++SS++   
Sbjct: 262 SAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTD-FMISSVLSAC 320

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A+   +E G+ +HA A K     +  V +++VDMY KCG I+ A ++F+E+P +N+VTW 
Sbjct: 321 AELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWN 380

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            +I GY   G    A+ LF +M L    + P  V  +++LS CS  G VE   + F  + 
Sbjct: 381 AMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMR 440

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            +  ++P  EH++C+VD LGR+G +D A   I++M ++P+I++W  LL ACR+HG  ELG
Sbjct: 441 LNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELG 500

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +   E L  LD  +  N+V++SN+ A AG W E   +RK  +  G+KK  G SW+ V   
Sbjct: 501 KIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNR 560

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F   D +H    +I  +L ++   MKE  G+V     +L D+++E K   +  HSEK
Sbjct: 561 IHVFQAKDSSHDRNSEIQAMLGKLRGGMKEA-GYVPDTNLSLFDLEDEEKASEVWYHSEK 619

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           +A+   L+        G  IR+ KNLR+CGDCH  IK +S+I+    +VRD  RFHRF+ 
Sbjct: 620 IALAFGLIA----LPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKD 675

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 676 GCCSCKDYW 684



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 4/221 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-N 77
           L  C   + L+ G QLH  +V+ G+  D+ + N LID Y KCG++  A  VF+++  R N
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW +++   +QN   +    +F Q     V+P +F +S+ + A   L  +E G  +H 
Sbjct: 276 VVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHA 334

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K+  E N  VG++++DMY KCG I  A ++F  +P ++L+TWNAMI GY   G  D 
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394

Query: 198 GLLLFRKMQ--EHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
            L LF +M    HG  P   T  S L  C  +G+V  G QI
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQI 435



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 6/217 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C++   L+ G  +H   VK     ++ + + L+DMY KCG +  A  VF ++ 
Sbjct: 313 ISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP 372

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
           ERN+V+W A++ G+   G+    L LF +M  GS  ++P+  TL + +     + +VE G
Sbjct: 373 ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERG 432

Query: 133 MQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYV 190
           +QI   M +  G E        ++D+  + G ++ A      M  +  I+ W A++    
Sbjct: 433 IQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACR 492

Query: 191 LAGYSDKGLLLFRKMQE--HGEIPDEFTFTSTLKACG 225
           + G ++ G +   K+ E  H +  +    ++ L + G
Sbjct: 493 MHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAG 529


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/675 (35%), Positives = 380/675 (56%), Gaps = 47/675 (6%)

Query: 24  KNLLLDYGVQLHGALVKMGFSFDLMLNNDL----IDMYAKCGEMNGACAVFDKMLERNVV 79
           KN  + Y  +LH    K+    DL  N  L    +  YA CGE      +FD++ ++NVV
Sbjct: 47  KNPDIKYLKKLHS---KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 103

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
            +  ++  ++ N      L +F  M    + P+ +T    +KAS     +  GMQIH   
Sbjct: 104 FFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAV 163

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           ++ G + N  VGN +I MY KCG + EA R+ D MP + +++WN+++AG    G  D  L
Sbjct: 164 VRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDAL 223

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            + ++M+  G  PD  T  S L A                 +T+    +V  V       
Sbjct: 224 EVCKEMELLGLKPDAGTMASLLPA-----------------VTNTCLDNVSFV------- 259

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
                      + +F  +  KS++SW+ +I  Y      AEA+++F Q+ + ++  D   
Sbjct: 260 -----------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAIS 308

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           ++S++    D + +  G++IH Y  +     +  + N+++DMY KCG ++ A E+F++M 
Sbjct: 309 IASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK 368

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++VV+WT +I+ YG +G  ++AV LF +M    + PD +A+++VLSACSH+GL++E + 
Sbjct: 369 FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRY 428

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF  +  + ++ PRIEH+ C+VD LGRAG++DEA   I+ MP++P+  +W  LLSACRV+
Sbjct: 429 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVY 488

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            ++ +G    + L +L  +    YV++SNI+A AG W +   +R + ++KG+KK+ G S 
Sbjct: 489 SNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSN 548

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
            E+D  +H F  GD +HP +++I++ L     +MKE  G+V     ALHD++EE KE  L
Sbjct: 549 FELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEA-GYVPETDSALHDVEEEDKECHL 607

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
            VHSEKLAI  A+    LN  PG  IR+ KNLRVCGDCH   K +SKI+     +RD  R
Sbjct: 608 AVHSEKLAIAFAI----LNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNR 663

Query: 680 FHRFEGGVCSCGDYW 694
           FH F  GVCSCGDYW
Sbjct: 664 FHHFYNGVCSCGDYW 678



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C     L  G ++H  +V+     +L+L N LIDMYAKCG +  A  VFD+M 
Sbjct: 309 IASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK 368

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSWT+++  +  NG  +  +SLF +M    + P+     + + A      ++ G +
Sbjct: 369 FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG-R 427

Query: 135 IHGMCMKSGFEWNPVVGNSI--IDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
            +   M    +  P + + +  +D+  + G+++EA      MP + +   W A+++ 
Sbjct: 428 YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/668 (34%), Positives = 375/668 (56%), Gaps = 8/668 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L +G  +HG +VK+G   ++ + N L+ +Y++ G    A  VF  M ER+++SW ++M  
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            ++Q+G     L +  ++       N  T ++ + A      +     +H + + +GF   
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183

Query: 148  PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +VGN+++ MY K G + EA ++   MP    +TWNA+I G+      ++ +  ++ ++E
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243

Query: 208  HGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G   +  T  S L AC +   +   G  IH  ++ +GF       +  SL+  Y KCG 
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGF--ESDDYVKNSLITMYAKCGD 1301

Query: 267  LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            L  +  +FD +  KS I+W++++   A      EA+++F ++R   + +D F  S  +  
Sbjct: 1302 LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 1361

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A+ A++E+G+Q+H    K+    D  V+N+ +DMY KCG + +  ++  +   ++ ++W
Sbjct: 1362 TANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSW 1421

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             ++I+ + +HG  ++A   F +ML    +PD V ++++LSAC+H GLV+E   Y+  +  
Sbjct: 1422 NILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR 1481

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            +  + P IEH  CI+D LGR+GRL  A+  I+ MPV P+   W++LL+ACR+HG+LEL R
Sbjct: 1482 EFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELAR 1541

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
            +  E LL LD  +   YV+ SN+ A +G W + E LRK   S  +KK    SWV++  ++
Sbjct: 1542 KTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKV 1601

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F  G+  HP   +I   L E+ K M +E G+V    +ALHD+ EE KE +L  HSE+L
Sbjct: 1602 HSFGMGEKYHPQASRISAKLGELMK-MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERL 1660

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            A+   L+    N      +R+FKNLRVCGDCH   K +S I+    V+RD  RFH F GG
Sbjct: 1661 ALAFGLI----NTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGG 1716

Query: 687  VCSCGDYW 694
             CSCGDYW
Sbjct: 1717 KCSCGDYW 1724



 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/564 (36%), Positives = 327/564 (57%), Gaps = 8/564 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLD-----YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           L S   RL  SL      L +D      G  +H  L+  GF  DL LN  LI  Y K G+
Sbjct: 21  LSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGD 80

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           +  A  VFD M ER+VVSWTA++ G+ QNG  +    LF  M    VK N+FT  + ++A
Sbjct: 81  VIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRA 140

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              L  ++ G+Q+ G   K  F  N  V ++++D +SKCG++ +A+ +F  M  + +++W
Sbjct: 141 CTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSW 200

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NAMI GY + G++D    +FR M   G +PD +T  S L+A    G +    QIHG +  
Sbjct: 201 NAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQ 260

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EA 301
            G  Y    ++ G L++ Y K G L  A+ +   + +K + S ++LI GYA E   + +A
Sbjct: 261 LG--YGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDA 318

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           ++LF+++ + ++ +D  +L SM+ + A+ A    G QIHA+A K     D ++ N+++DM
Sbjct: 319 LDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDM 378

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y K G I++A   F+EM  KNV++WT +I+GY KHG    AV L++KM     +P+ V +
Sbjct: 379 YAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTF 438

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L++L ACSH+GL  E  E F+ + N   +KPR EHYSC+VD   R G L+EA NL+  + 
Sbjct: 439 LSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKID 498

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           +K + ++W  +L A  ++G + LG+E    L  +  +N VNYV++++I++ AG W++  +
Sbjct: 499 IKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWK 558

Query: 542 LRKLARSKGLKKVAGRSWVEVDKE 565
           +RKL   +  KK AG S+ +  K+
Sbjct: 559 IRKLMEERSTKKNAGYSFFQATKK 582



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 260/506 (51%), Gaps = 19/506 (3%)

Query: 31   GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            G  LH   +    +  +   N LI+MY+K G +  A  VFD+M  RN  SW+ ++ G+++
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 91   NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFEWN 147
             G  +  + LFCQM    V+PN F +++ I A   SG ++  + G Q+HG  +K+G   +
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA--DEGFQVHGFVVKTGILGD 880

Query: 148  PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
              VG +++  Y   G +  A ++F+ MP  ++++W +++ GY  +G   + L ++++M++
Sbjct: 881  VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940

Query: 208  HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
             G   ++ TF +   +CG L     G Q+ G +I  GF  SV   +A SL+  +     +
Sbjct: 941  EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS--VANSLISMFSSFSSV 998

Query: 268  VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             EA  VFD + +  +ISW+++I  YA      E++  F  +R    + +   LSS++ V 
Sbjct: 999  EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 1058

Query: 328  ADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
            +    ++ G+ IH    K+  GLD++V   N+++ +Y + G  ++A  +F  M  +++++
Sbjct: 1059 SSVDNLKWGRGIHGLVVKL--GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 1116

Query: 386  WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            W  ++  Y + G   + + +  ++L      + V + + L+ACS+   + ES+   + + 
Sbjct: 1117 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 1176

Query: 446  NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
                    I   + +V   G+ G + EAK ++++MP +P    W  L+     H + E  
Sbjct: 1177 VAGFHDFLIVG-NALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEP 1231

Query: 506  REVGEI--LLRLDGDNPVNYVMMSNI 529
             E  +   L+R  G  P NY+ M ++
Sbjct: 1232 NEAVKAYKLIREKGI-PANYITMVSV 1256



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 258/553 (46%), Gaps = 38/553 (6%)

Query: 21   CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
            C     + D G Q+HG +VK G   D+ +   L+  Y   G +  A  +F++M + NVVS
Sbjct: 855  CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 914

Query: 81   WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            WT+LM G+  +GN    L+++ +M    V  N+ T +T   + G+L     G Q+ G  +
Sbjct: 915  WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 974

Query: 141  KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
            + GFE +  V NS+I M+S    + EA  +FD M    +I+WNAMI+ Y   G   + L 
Sbjct: 975  QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 1034

Query: 201  LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
             F  M+      +  T +S L  C S+ ++  G  IHG ++  G   +V   I  +L+  
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV--CICNTLLTL 1092

Query: 261  YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
            Y + G   +A  VF  + ++ +ISW+S++  Y Q+    + +++  +L +    ++    
Sbjct: 1093 YSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTF 1152

Query: 321  SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            +S +   ++   + + K +HA            V N++V MY K G++ EA ++   MP 
Sbjct: 1153 ASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQ 1212

Query: 381  KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS------HSGLV 434
             + VTW  +I G+ ++    EAV  ++ +    +  + +  ++VL ACS        G+ 
Sbjct: 1213 PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP 1272

Query: 435  EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              +    +   +D  +K      + ++    + G L+ +  + + +  K  I  W  +++
Sbjct: 1273 IHAHIVLTGFESDDYVK------NSLITMYAKCGDLNSSNYIFDGLGNKSPIT-WNAMVA 1325

Query: 495  ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            A   HG        GE  L++ G+       M N+  +         L + + S GL   
Sbjct: 1326 ANAHHG-------CGEEALKIFGE-------MRNVGVN---------LDQFSFSGGLAAT 1362

Query: 555  AGRSWVEVDKEIH 567
            A  + +E  +++H
Sbjct: 1363 ANLAVLEEGQQLH 1375



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 153/294 (52%), Gaps = 9/294 (3%)

Query: 120  IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            +K    ++S   G  +H  C+           N++I+MYSK G I  A  +FD M  ++ 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 180  ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG-GTQIHG 238
             +W+ M++GYV  G  ++ + LF +M   G  P+ F   S + AC   G +   G Q+HG
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 239  FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            F++ +G    V   +  +LV FY   G +  A+++F+ +   +V+SW+SL++GY+   N 
Sbjct: 871  FVVKTGILGDV--YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 928

Query: 299  AEAMELFRQLRERSL---QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
             E + +++++R+  +   Q     ++S  G+  D  L   G Q+  +  +       SV+
Sbjct: 929  GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL---GYQVLGHIIQYGFEDSVSVA 985

Query: 356  NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            NS++ M+     ++EA  +F+ M   ++++W  +I+ Y  HGL +E++  F  M
Sbjct: 986  NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 1039



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 1/167 (0%)

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           F++      GK +HA+       L    +N++++MY K G I+ A  +F+EM  +N  +W
Sbjct: 754 FSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 813

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           + +++GY + GL +EAVGLF +M    VEP+G    ++++ACS SG + +          
Sbjct: 814 STMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV 873

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              +   +   + +V   G  G +  A+ L E MP   ++  W +L+
Sbjct: 874 KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 4/205 (1%)

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           NL    E  + L     ++D  +   ++ +  D    +QG  IH +      G D  ++ 
Sbjct: 10  NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            ++  Y+K G +  A  +F+ MP ++VV+WT +++GY ++G  ++A  LF  M    V+ 
Sbjct: 70  KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           +   Y + L AC+    ++   +   + C  K R    +   S +VD   + G++++A  
Sbjct: 130 NQFTYGSALRACTSLRCLDMGIQV--QGCIQKGRFVENLFVKSALVDFHSKCGKMEDASY 187

Query: 476 LIESMPVKPSIAIWQTLLSACRVHG 500
           L  +M ++  +  W  ++    V G
Sbjct: 188 LFGTM-MERDVVSWNAMIGGYAVQG 211


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/664 (34%), Positives = 374/664 (56%), Gaps = 10/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  L+ +G  F   L   LI   +  G++  A  VFD +    +  W A++ G+ +N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +  L ++  M  + V P+ FT    +KA   LS ++ G  +H    + GF+ +  V N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 153 SIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +I +Y+KC R+  A  +F+   +P +++++W A+++ Y   G   + L +F +M++   
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD     S L A   L  +  G  IH  ++  G       +I  SL   Y KCG +  A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           + +FD ++  ++I W+++I GYA+     EA+++F ++  + ++ D   ++S +   A  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +EQ + ++ Y  +     D  +S++++DM+ KCG ++ A  +F+    ++VV W+ +I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GYG HG A+EA+ L+R M    V P+ V +L +L AC+HSG+V E   +F+R+  D ++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKI 455

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P+ +HY+C++D LGRAG LD+A  +I+ MPV+P + +W  LLSAC+ H  +ELG    +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  +D  N  +YV +SN++A A  W+    +R   + KGL K  G SWVEV   +  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP  E+I + +  +E R+KE  GFV     +LHD+ +E  EE+L  HSE++AI  
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEG-GFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    +   G  +R+ KNLR C +CH   K +SK++    VVRD  RFH F+ GVCSC
Sbjct: 635 GLI----STPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690

Query: 691 GDYW 694
           GDYW
Sbjct: 691 GDYW 694



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 201/411 (48%), Gaps = 7/411 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLER 76
           L+ CS    L  G  +H  + ++GF  D+ + N LI +YAKC  +  A  VF+   + ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +VSWTA++  + QNG     L +F QM    VKP+   L + + A   L  ++ G  IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K G E  P +  S+  MY+KCG++  A  +FD M + +LI WNAMI+GY   GY+ 
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + + +F +M      PD  + TS + AC  +GS+     ++ ++  S   Y     I+ +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD--YRDDVFISSA 363

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D + KCG +  AR VFD    + V+ WS++I+GY       EA+ L+R +    +  +
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                 ++       +V +G       A             ++D+  + G +D+A E+  
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MPV+  VT W  +++   KH   +  +G +    L  ++P    +   LS
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLS 532



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  ++  C++   L+    ++  + +  +  D+ +++ LIDM+AKCG + GA  VFD+ L
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R+VV W+A++ G+  +G A+  +SL+  M    V PN+ T    + A      V  G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
                              +ID+  + G +++A  +   MP +  +T W A+++ 
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/664 (36%), Positives = 374/664 (56%), Gaps = 10/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H  L+++G   D  L N L+           A  VF +    N+  +  L+ G + N 
Sbjct: 21  QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN-GMQIHGMCMKSGFEWNPVVG 151
             +  +S++  M      P+ FT    +KA   L    + G+ +H + +K+GF+W+  V 
Sbjct: 81  AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
             ++ +YSK G + +A ++FD +P K++++W A+I GY+ +G   + L LFR + E G  
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV-IAGSLVDFYVKCGCLVEA 270
           PD FT    L AC  +G +  G  I G++  SG   SV  V +A SLVD Y KCG + EA
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESG---SVGNVFVATSLVDMYAKCGSMEEA 257

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           RRVFD + +K V+ WS+LI GYA      EA+++F +++  +++ D + +  +    +  
Sbjct: 258 RRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRL 317

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +E G              +  +  +++D Y KCG + +A E+F  M  K+ V +  +I
Sbjct: 318 GALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVI 377

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +G    G    A G+F +M+   ++PDG  ++ +L  C+H+GLV++   YFS + +   +
Sbjct: 378 SGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSV 437

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P IEHY C+VD   RAG L EA++LI SMP++ +  +W  LL  CR+H D +L   V +
Sbjct: 438 TPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLK 497

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ L+  N  +YV++SNI++ +  W+E E++R     KG++K+ G SWVEVD  +H F 
Sbjct: 498 QLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFL 557

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HPL+ KI++ L  + K ++E  G+    ++ L D++EE KE  L  HSEKLA+  
Sbjct: 558 VGDTSHPLSHKIYEKLESLFKDLREA-GYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAF 616

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL+  G  +    VIRV KNLRVCGDCHE IK +SK+     +VRD  RFH F  G CSC
Sbjct: 617 ALISTGAKD----VIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSC 672

Query: 691 GDYW 694
            DYW
Sbjct: 673 RDYW 676



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 223/427 (52%), Gaps = 14/427 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+ LH  ++K GF +D+ +   L+ +Y+K G +  A  VFD++ E+NVVSWTA++CG+++
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G     L LF  +    ++P+ FTL   + A   +  + +G  I G   +SG   N  V
Sbjct: 181 SGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFV 240

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S++DMY+KCG + EA R+FD M  K ++ W+A+I GY   G   + L +F +MQ    
Sbjct: 241 ATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENV 300

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD +       AC  LG++  G    G +   G  +    V+  +L+DFY KCG + +A
Sbjct: 301 RPDCYAMVGVFSACSRLGALELGNWARGLM--DGDEFLSNPVLGTALIDFYAKCGSVAQA 358

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           + VF  + +K  + ++++I G A   ++  A  +F Q+ +  +Q DG     ++      
Sbjct: 359 KEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHA 418

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVS----NSIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
            LV+ G   H Y + + S    + +      +VD+  + GL+ EA +L   MP++ N + 
Sbjct: 419 GLVDDG---HRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIV 475

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRL 444
           W  ++ G   H   + A  + ++++  ++EP    +  +LS   S S   +E+++  S L
Sbjct: 476 WGALLGGCRLHKDTQLAEHVLKQLI--ELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSL 533

Query: 445 CNDKRMK 451
            N K M+
Sbjct: 534 -NQKGMQ 539



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 4/364 (1%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L S+    Q H + ++ G   +  + N ++           A  +F   P  ++  +N +
Sbjct: 13  LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGFLITSG 244
           I G V        + ++  M++HG  PD FTF   LKAC  L      G  +H  +I +G
Sbjct: 73  IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F + V   +   LV  Y K G L +AR+VFD I +K+V+SW+++I GY +     EA+ L
Sbjct: 133 FDWDV--FVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGL 190

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           FR L E  L+ D F L  ++   +    +  G+ I  Y  +  S  +  V+ S+VDMY K
Sbjct: 191 FRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAK 250

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ++EA  +F+ M  K+VV W+ +I GY  +G+ KEA+ +F +M  ++V PD  A + V
Sbjct: 251 CGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            SACS  G +E        +  D+ +   +   + ++D   + G + +AK + + M  K 
Sbjct: 311 FSACSRLGALELGNWARGLMDGDEFLSNPVLG-TALIDFYAKCGSVAQAKEVFKGMRRKD 369

Query: 485 SIAI 488
            +  
Sbjct: 370 CVVF 373



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 12/298 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS+   L  G  + G + + G   ++ +   L+DMYAKCG M  A  VFD M+E++V
Sbjct: 210 LYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDV 269

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W+AL+ G+  NG  K  L +F +M   +V+P+ + +     A   L ++E G    G+
Sbjct: 270 VCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGL 329

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                F  NPV+G ++ID Y+KCG + +A  +F  M  K  + +NA+I+G  + G+    
Sbjct: 330 MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAA 389

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
             +F +M + G  PD  TF   L  C   G V  G   H +       +SV   I   G 
Sbjct: 390 FGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG---HRYFSGMSSVFSVTPTIEHYGC 446

Query: 257 LVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           +VD   + G LVEA+   DLI     + + I W +L+ G    ++   A  + +QL E
Sbjct: 447 MVDLQARAGLLVEAQ---DLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIE 501


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 343/578 (59%), Gaps = 8/578 (1%)

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           +T +K   V   +  G  +H   ++S F  + V+GN++++MY+KCG + EA ++F+ MP 
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +  +TW  +I+GY         LL F +M   G  P+EFT +S +KA  +      G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HGF +  GF  +V   +  +L+D Y + G + +A+ VFD +E ++ +SW++LI G+A+  
Sbjct: 184 HGFCVKCGFDSNVH--VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A+ELF+ +     +   F  +S+ G  +    +EQGK +HAY  K    L     N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +++DMY K G I +A ++F+ +  ++VV+W  ++T Y +HG  KEAV  F +M    + P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + +++L+VL+ACSHSGL++E   Y+  +  D  + P   HY  +VD LGRAG L+ A   
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDLNRALRF 420

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           IE MP++P+ AIW+ LL+ACR+H + ELG    E +  LD D+P  +V++ NI+A  G W
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           N+  R+RK  +  G+KK    SWVE++  IH F   D+ HP  E+I +   E+  ++K E
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK-E 539

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           LG+V    + +  + ++ +E +L+ HSEK+A+  AL    LN  PG  I + KN+RVCGD
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFAL----LNTPPGSTIHIKKNIRVCGD 595

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH  IK  SK++    +VRD  RFH F+ G CSC DYW
Sbjct: 596 CHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 229/435 (52%), Gaps = 10/435 (2%)

Query: 2   NRVSFSLVSERQRLADSL-RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           N +  S +   +R  ++L + C+   LL  G  +H  +++  F  D+++ N L++MYAKC
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VF+KM +R+ V+WT L+ G+ Q+      L  F QM      PNEFTLS+ I
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA+        G Q+HG C+K GF+ N  VG++++D+Y++ G +++A  +FD + +++ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +WNA+IAG+     ++K L LF+ M   G  P  F++ S   AC S G +  G  +H ++
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           I SG    +      +L+D Y K G + +AR++FD + ++ V+SW+SL+  YAQ     E
Sbjct: 289 IKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
           A+  F ++R   ++ +     S++   +   L+++G   H Y      G+     +  ++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEAWHYVTV 404

Query: 359 VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           VD+  + G ++ A     EMP++     W  ++     H      +G +    + +++PD
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPD 462

Query: 418 GVAYLAVLSACSHSG 432
                 +L     SG
Sbjct: 463 DPGPHVILYNIYASG 477


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/643 (37%), Positives = 370/643 (57%), Gaps = 17/643 (2%)

Query: 62  EMNGACAVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           E      +F++ +++ +V SW +++    ++G++   L  F  M   S+ P   +    I
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L  + +G Q H      G++ +  V +++I MYS CG++ +A ++FD +P ++++
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           +W +MI GY L G +   + LF+ +       +     D     S + AC  + + G   
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCG--CLVEARRVFDLIEQKSVISWSSLILGY 292
            IH F+I  GF   V   +  +L+D Y K G   +  AR++FD I  K  +S++S++  Y
Sbjct: 204 SIHSFVIKRGFDRGVS--VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261

Query: 293 AQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           AQ     EA E+FR+L + + +  +   LS+++   +    +  GK IH    ++    D
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V  SI+DMY KCG ++ A + F+ M  KNV +WT +I GYG HG A +A+ LF  M+ 
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V P+ + +++VL+ACSH+GL  E   +F+ +     ++P +EHY C+VD LGRAG L 
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A +LI+ M +KP   IW +LL+ACR+H ++EL       L  LD  N   Y+++S+I+A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           DAG W + ER+R + +++GL K  G S +E++ E+H F  GD+ HP  EKI++ L E+ +
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++ E  G+V       HD+ EE KE +LRVHSEKLAI      G +N  PG  + V KNL
Sbjct: 562 KLLEA-GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF----GIMNTVPGSTVNVVKNL 616

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RVC DCH  IK +SKI+   FVVRDA RFH F+ G CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 211/407 (51%), Gaps = 23/407 (5%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS    +  G Q H      G+  D+ +++ LI MY+ CG++  
Sbjct: 70  LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFD++ +RN+VSWT+++ G+  NGNA   +SLF  +    V  N+   +  + + G+
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGL 186

Query: 126 LSSVE-------NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGR--INEAARMFDVM 174
           +S +         G+   IH   +K GF+    VGN+++D Y+K G   +  A ++FD +
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGG 233
             K  +++N++++ Y  +G S++   +FR++ ++  +  +  T ++ L A    G++  G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             IH  +I  G    V  ++  S++D Y KCG +  AR+ FD ++ K+V SW+++I GY 
Sbjct: 307 KCIHDQVIRMGLEDDV--IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL-VEQGKQIHAYAAK--VPSGL 350
              + A+A+ELF  + +  ++ +     S++   +   L VE  +  +A   +  V  GL
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
           +      +VD+  + G + +A +L   M +K + + W+ ++     H
Sbjct: 425 EH--YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/697 (36%), Positives = 386/697 (55%), Gaps = 66/697 (9%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +QLH +       FD +  +DL     +   +  A  +FD+M ER+VVSW A++ G+ QN
Sbjct: 21  LQLHASP-----EFDFLERHDLRGC-VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQN 74

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS-VENG-MQIHGMCMKSGFEWNPV 149
           G  K    +F          +E     +I  +G+L++ V+NG ++      +S  +W  +
Sbjct: 75  GYVKEAKEIF----------DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 124

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
             N ++  Y K  R+ +A  +FD MP +  ++WN MI+GY   G     LL  +++ E  
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNG----ELLEAQRLFEES 180

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP----YSVKTVIAG---------- 255
            + D FT+T+ +      G V  G       +  G P     S   +IAG          
Sbjct: 181 PVRDVFTWTAMVS-----GYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA 235

Query: 256 ----------------SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
                           +++  Y + G + +AR  FD + Q+  ISW+++I GYAQ     
Sbjct: 236 RELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGE 295

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNS 357
           EA+ LF +++    +++    +S +   A+ A +E GKQ+H    K  +GL++   V N+
Sbjct: 296 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK--AGLESGCYVGNA 353

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KCG ID+A  +F  +  K VV+W  +I GY +HG  KEA+ LF  M    + PD
Sbjct: 354 LLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPD 413

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            V  + VLSACSH+GLV++  EYF  +  D  +    +HY+C++D LGRAGRLD+A+NL+
Sbjct: 414 DVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLM 473

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           ++MP +P  A W  LL A R+HG+ ELG +  +++  ++ DN   YV++SN++A +G W 
Sbjct: 474 KNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWG 533

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           +  R+R   R +G+KKV G SWVEV  +IH F  GD  HP  ++I+  L E++ +MK+E 
Sbjct: 534 DVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKE- 592

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+V   K  LHD++EE K   L+ HSEKLA+   +    L    G+ IRV KNLRVC DC
Sbjct: 593 GYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGI----LAIPAGRPIRVIKNLRVCEDC 648

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  +K +SKI+  + ++RD+ RFH F GG CSCGDYW
Sbjct: 649 HNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R     +L  C++   L+ G Q+HG +VK G      + N L+ MY KCG ++ A  VF+
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 372

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            + E+ VVSW  ++ G+ ++G  K  L LF  M  + + P++ T+   + A      V+ 
Sbjct: 373 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGY 189
           G +  + M    G   N      +ID+  + GR+++A  +   MP      TW A++   
Sbjct: 433 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 492

Query: 190 VLAGYSDKG 198
            + G ++ G
Sbjct: 493 RIHGNTELG 501


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 378/689 (54%), Gaps = 20/689 (2%)

Query: 16  ADSLRCCSKNLL----LDYGVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           AD+L    KN +    +  G  +H  +VK +       L N LI+MY+K      A  V 
Sbjct: 6   ADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
                RNVVSWT+L+ G  QNG+    L  F +M    V PN+FT     KA   L    
Sbjct: 66  RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIH + +K G   +  VG S  DMY K    ++A ++FD +P ++L TWNA I+  V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185

Query: 191 LAGYSDKGL---LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
             G   + +   + FR++  H   P+  TF + L AC     +  G Q+HG ++ SGF  
Sbjct: 186 TDGRPREAIEAFIEFRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V   +   L+DFY KC  +  +  +F  +  K+ +SW SL+  Y Q     +A  L+ +
Sbjct: 243 DVS--VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
            R+  ++   F++SS++   A  A +E G+ IHA+A K        V +++VDMY KCG 
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV--EPDGVAYLAVL 425
           I+++ + F+EMP KN+VT   +I GY   G    A+ LF +M        P+ + ++++L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACS +G VE   + F  + +   ++P  EHYSCIVD LGRAG ++ A   I+ MP++P+
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
           I++W  L +ACR+HG  +LG    E L +LD  +  N+V++SN  A AG W E   +R+ 
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            +  G+KK AG SW+ V  ++H F   D +H L ++I   L ++   M E  G+   +K 
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM-EAAGYKPDLKL 599

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
           +L+D++EE K   +  HSEKLA+   L+   L+      IR+ KNLR+CGDCH F K +S
Sbjct: 600 SLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP----IRITKNLRICGDCHSFFKFVS 655

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +K   +VRD  RFHRF+ G+CSC DYW
Sbjct: 656 GSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 6/191 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C+    L+ G  +H   VK      + + + L+DMY KCG +  +   FD+M 
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKASGVLSSVENG 132
           E+N+V+  +L+ G+   G     L+LF +M        PN  T  + + A     +VENG
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432

Query: 133 MQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGY 189
           M+I    M+S +   P   +   I+DM  + G +  A      MP +  I+ W A+    
Sbjct: 433 MKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491

Query: 190 VLAGYSDKGLL 200
            + G    GLL
Sbjct: 492 RMHGKPQLGLL 502


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/675 (35%), Positives = 381/675 (56%), Gaps = 47/675 (6%)

Query: 24   KNLLLDYGVQLHGALVKMGFSFDLMLNNDL----IDMYAKCGEMNGACAVFDKMLERNVV 79
            KN  + Y  +LH    K+    DL  N  L    +  YA CGE      +FD++ ++NVV
Sbjct: 1036 KNPDIKYLKKLHS---KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 1092

Query: 80   SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
             +  ++  ++ N      L +F  M    + P+ +T    +KAS     +  GMQIH   
Sbjct: 1093 FFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAV 1152

Query: 140  MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
            ++ G + N  VGN +I MY KCG + EA R+ D MP + +++WN+++AG    G  D  L
Sbjct: 1153 VRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDAL 1212

Query: 200  LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
             + ++M+  G  PD  T  S L A                 +T+    +V  V       
Sbjct: 1213 EVCKEMELLGLKPDAGTMASLLPA-----------------VTNTCLDNVSFV------- 1248

Query: 260  FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
                       + +F  +  KS++SW+ +I  Y      AEA+++F Q+ + ++  D   
Sbjct: 1249 -----------KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAIS 1297

Query: 320  LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            ++S++    D + +  G++IH Y  +     +  + N+++DMY KCG ++ A E+F++M 
Sbjct: 1298 IASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK 1357

Query: 380  VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             ++VV+WT +I+ YG +G  ++AV LF +M    + PD +A+++VLSACSH+GL++E + 
Sbjct: 1358 FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRY 1417

Query: 440  YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            YF  +  + ++ PRIEH+ C+VD LGRAG++DEA   I+ MP++P+  +W  LLSACRV+
Sbjct: 1418 YFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVY 1477

Query: 500  GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
             ++ +G    + L +L  +    YV++SNI+A AG W +   +R + ++KG+KK+ G S 
Sbjct: 1478 SNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSN 1537

Query: 560  VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
             E+D  +H F  GD +HP +++I++ L  +  +MKE  G+V     ALHD++EE KE  L
Sbjct: 1538 FELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEA-GYVPETDSALHDVEEEDKECHL 1596

Query: 620  RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             VHSEKLAI  A+    LN  PG  IR+ KNLRVCGDCH   K +SKI+     +RD  R
Sbjct: 1597 AVHSEKLAIAFAI----LNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNR 1652

Query: 680  FHRFEGGVCSCGDYW 694
            FH F  GVCSCGDYW
Sbjct: 1653 FHHFYNGVCSCGDYW 1667



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 4/177 (2%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            +A  L  C     L  G ++H  +V+     +L+L N LIDMYAKCG +  A  VFD+M 
Sbjct: 1298 IASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMK 1357

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             R+VVSWT+++  +  NG  +  +SLF +M    + P+     + + A      ++ G +
Sbjct: 1358 FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG-R 1416

Query: 135  IHGMCMKSGFEWNPVVGNSI--IDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
             +   M    +  P + + +  +D+  + G+++EA      MP + +   W A+++ 
Sbjct: 1417 YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/643 (37%), Positives = 369/643 (57%), Gaps = 17/643 (2%)

Query: 62  EMNGACAVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           E      +F++ +++ +V SW +++    ++G++   L  F  M   S+ P   +    I
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L  + +G Q H      G++ +  V +++I MYS CG++ +A ++FD +P + ++
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIV 143

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           +W +MI GY L G +   + LF+ +       +     D     S + AC  + + G   
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCG--CLVEARRVFDLIEQKSVISWSSLILGY 292
            IH F+I  GF   V   +  +L+D Y K G   +  AR++FD I  K  +S++S++  Y
Sbjct: 204 SIHSFVIKRGFDRGVS--VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261

Query: 293 AQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           AQ     EA E+FR+L + + +  +   LS+++   +    +  GK IH    ++    D
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V  SI+DMY KCG ++ A + F+ M  KNV +WT +I GYG HG A +A+ LF  M+ 
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V P+ + +++VL+ACSH+GL  E   +F+ +     ++P +EHY C+VD LGRAG L 
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A +LI+ M +KP   IW +LL+ACR+H ++EL       L  LD  N   Y+++S+I+A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           DAG W + ER+R + +++GL K  G S +E++ E+H F  GD+ HP  EKI++ L E+ +
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++ E  G+V       HD+ EE KE +LRVHSEKLAI      G +N  PG  + V KNL
Sbjct: 562 KLLEA-GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF----GIMNTVPGSTVNVVKNL 616

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RVC DCH  IK +SKI+   FVVRDA RFH F+ G CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 211/407 (51%), Gaps = 23/407 (5%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS    +  G Q H      G+  D+ +++ LI MY+ CG++  
Sbjct: 70  LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFD++ +R++VSWT+++ G+  NGNA   +SLF  +    V  N+   +  + + G+
Sbjct: 130 ARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGL 186

Query: 126 LSSVE-------NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGR--INEAARMFDVM 174
           +S +         G+   IH   +K GF+    VGN+++D Y+K G   +  A ++FD +
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGG 233
             K  +++N++++ Y  +G S++   +FR++ ++  +  +  T ++ L A    G++  G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             IH  +I  G    V  ++  S++D Y KCG +  AR+ FD ++ K+V SW+++I GY 
Sbjct: 307 KCIHDQVIRMGLEDDV--IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL-VEQGKQIHAYAAK--VPSGL 350
              + A+A+ELF  + +  ++ +     S++   +   L VE  +  +A   +  V  GL
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
           +      +VD+  + G + +A +L   M +K + + W+ ++     H
Sbjct: 425 EH--YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 388/659 (58%), Gaps = 12/659 (1%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  G ++HG ++  G   F + + N L++MYAKCG +  A  VF  M+E++ VSW +++ 
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G  QNG     +  +  M    + P  FTL +++ +   L   + G QIHG  +K G + 
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 168

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKM 205
           N  V N+++ +Y++ G +NE  ++F  MP    ++WN++I     +  S  + +  F   
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 228

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G+  +  TF+S L A  SL     G QIHG  +   +  + +     +L+  Y KCG
Sbjct: 229 LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK--YNIADEATTENALIACYGKCG 286

Query: 266 CLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            +    ++F  + E++  ++W+S+I GY   E LA+A++L   + +   ++D F+ ++++
Sbjct: 287 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 346

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             FA  A +E+G ++HA + +     D  V +++VDMY KCG +D A   FN MPV+N  
Sbjct: 347 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 406

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           +W  +I+GY +HG  +EA+ LF  M LD    PD V ++ VLSACSH+GL+EE  ++F  
Sbjct: 407 SWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 466

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-D 501
           + +   + PRIEH+SC+ D LGRAG LD+ ++ I+ MPVKP++ IW+T+L A CR +G  
Sbjct: 467 MSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRK 526

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
            ELG++  E+L +L+ +N VNYV++ N++A  G W +  + RK  +   +KK AG SWV 
Sbjct: 527 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 586

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           +   +H F  GD +HP T+ I++ L E+ ++M++  G+V    +AL+D+++E+KEE L  
Sbjct: 587 MKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDA-GYVPQTGFALYDLEQENKEEILSY 645

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
           HSEKLA+   L     +  P   IR+ KNLRVCGDCH   K +SKI     ++RD+ R+
Sbjct: 646 HSEKLAVAFVLAAQRSSTLP---IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 204/427 (47%), Gaps = 16/427 (3%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF+L+S       SL  C+       G Q+HG  +K+G   ++ ++N L+ +YA+ G +N
Sbjct: 135 SFTLIS-------SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 187

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
               +F  M E + VSW +++     +  +    ++ F     +  K N  T S+ + A 
Sbjct: 188 ECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAV 247

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITW 182
             LS  E G QIHG+ +K          N++I  Y KCG ++   ++F  M   +  +TW
Sbjct: 248 SSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTW 307

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N+MI+GY+      K L L   M + G+  D F + + L A  S+ ++  G ++H   + 
Sbjct: 308 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 367

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +     V  V+  +LVD Y KCG L  A R F+ +  ++  SW+S+I GYA+     EA+
Sbjct: 368 ACLESDV--VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 425

Query: 303 ELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIV 359
           +LF  ++ +     D      ++   +   L+E+G + H  +     GL   + +   + 
Sbjct: 426 KLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMA 484

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           D+  + G +D+  +  ++MPVK NV+ W  ++    +    K  +G     +L  +EP+ 
Sbjct: 485 DLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 544

Query: 419 VAYLAVL 425
                +L
Sbjct: 545 AVNYVLL 551


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/697 (34%), Positives = 385/697 (55%), Gaps = 43/697 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + L+++       +G   A +VF+ + E N++ W  +  G   
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     + + G QIHG  +K G++ +  V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I +Y + GR                               I  A ++FD +P K +
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+GY   G   + L LF++M +    PDE T  + + AC   GS+  G Q+H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSW 291

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  SL+D Y KCG L  A  +F+ +  K VISW++LI GY       
Sbjct: 292 IDDHGFGSNLK--IVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYK 349

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK-VPSGLD-TSVSNS 357
           EA+ LF+++     + +   + S++   A    ++ G+ IH Y  K + S  + +S+  S
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTS 409

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++FN +  K++ +W  +I G+  HG A  A  +F +M    +EPD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPD 469

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACS SG+++  +  F  +  D ++ P++EHY C++D LG +G   EA+ +I
Sbjct: 470 DITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            +M ++P   IW +LL AC++ G++ELG    + L++++ +NP  YV++SNI+A AG WN
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWN 589

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  ++R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  + E+ 
Sbjct: 590 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL-EKA 648

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 704

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   + RD TRFH F  GVCSC DYW
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 230/507 (45%), Gaps = 72/507 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K+     G Q+HG ++K+G+  DL ++  LI +Y + G +
Sbjct: 126 ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRL 185

Query: 64  NGACAVFDKMLER-------------------------------NVVSWTALMCGFLQNG 92
             A  VFD+   R                               +VVSW A++ G+ + G
Sbjct: 186 EDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETG 245

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L LF +M  ++++P+E T+ T + A     S+E G Q+H      GF  N  + N
Sbjct: 246 NYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 305

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++D+YSKCG +  A  +F+ +  K +I+WN +I GY       + LLLF++M   GE P
Sbjct: 306 SLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERP 365

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ I  KS+ SW+++I G+A       A ++F ++R+  ++ D      ++   +   +
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGM 485

Query: 333 VEQGKQIHAYAA---KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
           ++ G+ I        K+   L+      ++D+    GL  EA E+ N M           
Sbjct: 486 LDLGRHIFRTMTQDYKITPKLEH--YGCMIDLLGHSGLFKEAEEMINNM----------- 532

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
                                  ++EPDGV + ++L AC   G VE  + +   L   + 
Sbjct: 533 -----------------------EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEP 569

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNL 476
             P    Y  + +    AGR +E   +
Sbjct: 570 ENPGC--YVLLSNIYATAGRWNEVAKI 594


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/692 (33%), Positives = 387/692 (55%), Gaps = 38/692 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-NVVSWTALMCGFLQN 91
           QLH  +++       +L+  ++ +Y+    ++ +  +F+ +      ++W +++  +  +
Sbjct: 26  QLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     LS F QM +S   P+     + +K+  ++  +  G  +HG  ++ G  ++    
Sbjct: 85  GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144

Query: 152 NSIIDMYSKCGRINEA-----------------------------ARMFDVMPAKSLITW 182
           N++++MYSK   + E                               ++F++MP + +++W
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSW 204

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N +I+G    G  +  L++ R+M      PD FT +S L       ++  G +IHG+ I 
Sbjct: 205 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 264

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +G  Y     I  SL+D Y KC  + ++ RVF ++ Q   ISW+S+I G  Q     E +
Sbjct: 265 NG--YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGL 322

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
           + F+Q+    ++ +    SS+M   A    +  GKQ+H Y  +     +  +++++VDMY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG I  A  +F++M + ++V+WT +I GY  HG A +A+ LF++M ++ V+P+ VA++
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           AVL+ACSH+GLV+E+ +YF+ +  D R+ P +EHY+ + D LGR GRL+EA   I  M +
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +P+ ++W TLL+ACRVH ++EL  +V + L  +D  N   YV++SNI++ AG W +  +L
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 562

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
           R   R KG+KK    SW+E+  ++H F  GD +HP  ++I++ L  + ++M+ E G+V  
Sbjct: 563 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE-GYVLD 621

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
               LHD++EE K   L  HSE+LAI      G ++   G  IRV KNLRVC DCH   K
Sbjct: 622 TTEVLHDVEEEQKRYLLCSHSERLAITF----GIISTPAGTTIRVTKNLRVCVDCHTATK 677

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +SKI+    VVRD +RFH F+ G CSCGD+W
Sbjct: 678 FISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 237/441 (53%), Gaps = 39/441 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK---CGEMNGACAVFDK--- 72
           L+ C+    L +G  +HG ++++G  FDL   N L++MY+K     E+N    VFD+   
Sbjct: 113 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKT 172

Query: 73  -----------------------MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV 109
                                  M +R++VSW  ++ G  QNG  +  L +  +MG++ +
Sbjct: 173 SDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADL 232

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           +P+ FTLS+ +       ++  G +IHG  +++G++ +  +G+S+IDMY+KC R++++ R
Sbjct: 233 RPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCR 292

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F ++P    I+WN++IAG V  G  D+GL  F++M      P+  +F+S + AC  L +
Sbjct: 293 VFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT 352

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G Q+HG++I S F  +V   IA +LVD Y KCG +  AR +FD +E   ++SW+++I
Sbjct: 353 LHLGKQLHGYIIRSRFDGNV--FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMI 410

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-KQIHAYAA--KV 346
           +GYA   +  +A+ LF+++    ++ +     +++   +   LV++  K  ++     ++
Sbjct: 411 MGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRI 470

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLAKEAVGL 405
             GL+     ++ D+  + G ++EA E  ++M ++     W+ ++     H   + A  +
Sbjct: 471 IPGLEHYA--AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKV 528

Query: 406 FRKMLLDDVEPDGVAYLAVLS 426
            +K+    V+P  +    +LS
Sbjct: 529 SKKLF--TVDPQNIGAYVLLS 547



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 17/192 (8%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N VSFS +         +  C+    L  G QLHG +++  F  ++ + + L+DMYAKCG
Sbjct: 336 NHVSFSSI---------MPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 386

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FDKM   ++VSWTA++ G+  +G+A   +SLF +M    VKPN       + 
Sbjct: 387 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 446

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM---PA 176
           A      V+   +     M   +   P + +  ++ D+  + GR+ EA      M   P 
Sbjct: 447 ACSHAGLVDEAWKYFN-SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 505

Query: 177 KSLITWNAMIAG 188
            S+  W+ ++A 
Sbjct: 506 GSV--WSTLLAA 515


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/686 (34%), Positives = 395/686 (57%), Gaps = 21/686 (3%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C  +NL  +    +HG +VK GF  DL +   L+++Y+KCG M  A  VFD +  RNV +
Sbjct: 74  CIDRNLATE-ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA 132

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT L+ G++QN +    L LF +M  +   P+ +TL   + A   L S+E G Q+H   +
Sbjct: 133 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 192

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K   +++  +GNS+   YSK  R+  A + F ++  K +I+W ++I+     G + + L 
Sbjct: 193 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 252

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
            F  M   G  P+E+T TS L AC  + ++  G QIH   I  G+  S+  +I  S++  
Sbjct: 253 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI--LIKNSIMYL 310

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-----------AMELFRQLR 309
           Y+KCG L+EA+++F+ +E  ++++W+++I G+A+  +LAE           A+ +F++L 
Sbjct: 311 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 370

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              ++ D F  SS++ V ++   +EQG+QIH    K     D  V  ++V MY KCG ID
Sbjct: 371 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 430

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A++ F EMP + +++WT +ITG+ +HGL+++A+ LF  M L  ++P+ V ++ VLSACS
Sbjct: 431 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 490

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+GL +E+  YF  +     +KP ++H++C++D   R GR++EA +++  M  +P+  IW
Sbjct: 491 HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIW 550

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             L++ CR HG  +LG    E LL+L   +   YV + N+H  AG W +  ++RKL + +
Sbjct: 551 SMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEE 610

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF--VYGVKYAL 607
            + K+   SW+ + ++++ F   D +H  + +++++L  +   +K  LG+  +  V+   
Sbjct: 611 KVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK-ALGYEPIEDVEVIE 669

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            +  EE    S  +HSEKLAI   L    LN      IRV K++ +C DCH FI+ +S +
Sbjct: 670 KEENEERVLSSTVLHSEKLAIAFGL----LNLPTATPIRVVKSITMCRDCHNFIRFISLL 725

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDY 693
                V+RD+ + H+F  G CSCG Y
Sbjct: 726 KGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 227/424 (53%), Gaps = 22/424 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    +++G Q+H  L+K    FD  + N L   Y+K   +  A   F  + E++V
Sbjct: 172 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 231

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWT+++     NG A   LS F  M S  +KPNE+TL++ + A  V+ +++ G QIH +
Sbjct: 232 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 291

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV-------- 190
            +K G+  + ++ NSI+ +Y KCG + EA ++F+ M   +L+TWNAMIAG+         
Sbjct: 292 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 351

Query: 191 -LAGYS--DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +A +      L +F+K+   G  PD FTF+S L  C +L ++  G QIHG +I SG   
Sbjct: 352 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA 411

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V  V+  +LV  Y KCG + +A + F  +  +++ISW+S+I G+A+     +A++LF  
Sbjct: 412 DV--VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFED 469

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLK 364
           +R   ++ +      ++   +   L ++         K   +   +D      ++DMYL+
Sbjct: 470 MRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA--CLIDMYLR 527

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV-AYL 422
            G ++EA ++ ++M  + N   W+++I G   HG  K  +G +    L  ++P  V  Y+
Sbjct: 528 LGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPKDVETYV 585

Query: 423 AVLS 426
           ++L+
Sbjct: 586 SLLN 589



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 23/308 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+ +S  +      L   L  C   L LD G Q+H   +K+G+   +++ N ++ +Y KC
Sbjct: 255 MDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKC 314

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQ-----------NGNAKACLSLFCQMGSSSV 109
           G +  A  +F+ M   N+V+W A++ G  +           + +    L++F ++  S +
Sbjct: 315 GWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGM 374

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           KP+ FT S+ +     L ++E G QIHG  +KSG   + VVG +++ MY+KCG I++A++
Sbjct: 375 KPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASK 434

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
            F  MP++++I+W +MI G+   G S + L LF  M+  G  P++ TF   L AC   G 
Sbjct: 435 AFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 494

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSV----I 283
                 ++ F +     Y++K V+     L+D Y++ G + EA   FD++ + +      
Sbjct: 495 --ADEALYYFELMQK-QYNIKPVMDHFACLIDMYLRLGRVEEA---FDVVHKMNFEPNET 548

Query: 284 SWSSLILG 291
            WS LI G
Sbjct: 549 IWSMLIAG 556


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/683 (33%), Positives = 382/683 (55%), Gaps = 26/683 (3%)

Query: 28  LDYGVQLHGALVKMGFS--------FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           L++G  +H  L+    S        F+++  N LI++Y KC ++  A  +FD+M  R+VV
Sbjct: 28  LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           S+  LM G+L +G     + LF  M SS  +PNE+  +T + A      V  GMQ HG  
Sbjct: 88  SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFL 147

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMF-----DVMPAKSLITWNAMIAGYVLAGY 194
            K G  ++  V +S++ MYSKC  ++ A ++      ++        +N+++   V +G 
Sbjct: 148 FKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGR 207

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + +  +M + G + D  T+ S +  CG +  +G G Q+H  L+  G  + V   + 
Sbjct: 208 LGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV--FVG 265

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             LVD + KCG ++ AR+VFD ++ ++V+ W+SL+  Y Q     E + L   +      
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTM 325

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F  + ++  FA  A +  G  +HA   K+       V N++++MY KCG ID + ++
Sbjct: 326 SNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDV 385

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F +M  ++++TW  +I GY +HGL K+A+ LF+ ML     P+ V ++ VLSAC+H  LV
Sbjct: 386 FFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALV 445

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            E   Y ++L    +++P +EHY+C+V  L RAG L+EA+N + +  VK  +  W+ LL+
Sbjct: 446 NEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLN 505

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC +H +  LG ++ E +L++D  +   Y ++SN++A A SW+    +RK+ R + +KK 
Sbjct: 506 ACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKE 565

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIH---QVLMEMEKRMKEELGFVYGVKYALHDIQ 611
            G SW+E+   +H F      HP   +I+   Q+L+EM K    +LG+V  ++  LHD++
Sbjct: 566 PGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIK----QLGYVPNIEAVLHDVE 621

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E KE  L  HSEKLAI   L++      P   IRV KNLR+C DCH  +K +SK+   +
Sbjct: 622 DEQKESYLNYHSEKLAIAYGLMKI---PSPAP-IRVIKNLRICEDCHTAVKLISKVTNRL 677

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRDA+RFH F  G C+C D+W
Sbjct: 678 IIVRDASRFHHFRDGTCTCTDHW 700


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/639 (37%), Positives = 364/639 (56%), Gaps = 8/639 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY+K    N A  +      R VV+WTAL+ G +QNG   + L  F +M   ++KPN+FT
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                KAS  L     G QIH + +K G   +  VG S  DMYSK G   EA R+FD MP
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            +++  WNA I+  VL G   K +  F + +  G  PD  TF + L AC     +  G Q
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +HG +I SGF   V   +A  ++D Y KC  +  A  VF+ + +++ +SW +++    Q 
Sbjct: 181 LHGLVIRSGFEGDVS--VANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQN 238

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           +   +A  +F   R+  +++  +++SS++  +A  + +E G+ +HA A K     D  V 
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVG 298

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           +++VDMY KCG I++  ++F+EMP +N+V+W  +I+GY   G    A+ LF +M  + V 
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV- 357

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
            + V  + VLSACS  G V+   E F  + +  R++P  EHY+CI D LGRAG ++ A  
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYE 417

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            ++ MP++P+I++W  LL+ACRV+G+ ELG+   + L +LD  +  N+V++SN+ A AG 
Sbjct: 418 FVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGR 477

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           W+E   +RK  +  G+KK AG SWV    ++H F   D +H    +I  +L+++   M +
Sbjct: 478 WDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEM-Q 536

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
             G++    YAL+D++EE K   +  HSEK+A+   L+       PG  IR+ KNLR+CG
Sbjct: 537 AAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLI----ALPPGVPIRITKNLRICG 592

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH   K +S I+    +VRD  RFHRF    CSC D+W
Sbjct: 593 DCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 184/385 (47%), Gaps = 13/385 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   +K+G   D  +     DMY+K G    A  +FD+M  RNV  W A +   + 
Sbjct: 77  GKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVL 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G     +  F +      +P+  T    + A      ++ G Q+HG+ ++SGFE +  V
Sbjct: 137 DGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N IID+Y KC  +  A  +F+ M  ++ ++W  M+A        +K  ++F   ++ G 
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
              ++  +S + A   +  +  G  +H   + +     +   +  +LVD Y KCG + + 
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDI--FVGSALVDMYGKCGSIEDC 314

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            +VF  + +++++SW+++I GYA + ++  AM LF +++  ++  +   L  ++   +  
Sbjct: 315 EQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRG 373

Query: 331 ALVEQGKQIHAYAA---KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-W 386
             V+ G +I        ++  G +      I DM  + G+++ A E   +MP++  ++ W
Sbjct: 374 GAVKLGNEIFESMRDRYRIEPGAEHYA--CIADMLGRAGMVERAYEFVQKMPIRPTISVW 431

Query: 387 TVIITG---YGKHGLAKEAV-GLFR 407
             ++     YG+  L K A   LF+
Sbjct: 432 GALLNACRVYGEPELGKIAADNLFK 456



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 1/218 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    LD G QLHG +++ GF  D+ + N +ID+Y KC E+  A  VF+ M  RN 
Sbjct: 166 LNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNS 225

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++    QN   +    +F       ++  ++ +S+ I A   +S +E G  +H +
Sbjct: 226 VSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHAL 285

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  E +  VG++++DMY KCG I +  ++F  MP ++L++WNAMI+GY   G  D  
Sbjct: 286 AVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMA 345

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + LF +MQ    + +  T    L AC   G+V  G +I
Sbjct: 346 MTLFEEMQSEA-VANYVTLICVLSACSRGGAVKLGNEI 382


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/733 (35%), Positives = 395/733 (53%), Gaps = 53/733 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MN++S++L    QR    L+ C     L  G  LH   +K         +N  I +Y+KC
Sbjct: 1   MNQISWTL----QRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKC 56

Query: 61  GEM------------------NGACA-------------VFDKMLERNVVSWTALMCGFL 89
           G +                  N   A             +FD++ E ++VS+  L+  + 
Sbjct: 57  GRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYA 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G     L LF  M    +  + FTLS  I A      V    Q+H + + SGF+    
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDXFTLSAVITA--CCDDVGLIGQLHSVAVSSGFDSYVS 174

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           V N+++  Y K G +++A R+F  M   +  ++WN+MI  Y       K L LF++M   
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC-L 267
           G   D FT  S L A   L  + GG Q HG LI +GF  +  + +   L+D Y KCG  +
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN--SHVGSGLIDLYSKCGGGM 292

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQ-EENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            + R+VF+ I +  ++ W++++ GY+Q EE L +A+E FRQ++    + +      ++  
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352

Query: 327 FADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
            ++ +   QGKQIH+ A K  +PS    SV N+++ MY KCG + +A  LF+ M   N V
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSN-RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +   +I GY +HG+  E++ LF+ ML   + P  + +++VLSAC+H+G VEE   YF+ +
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                ++P  EHYSC++D LGRAG+L EA+NLI  MP  P    W +LL ACR HG++EL
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIEL 531

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
             +    +L+L+  N   YV++SN++A AG W E   +RK  R +G+KK  G SW+EV K
Sbjct: 532 AVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKK 591

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEESKEESLRV-- 621
            IH F   D +HP+ ++I++ L EM  +MK   G+V  V++AL  D      E+ +R+  
Sbjct: 592 RIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRA-GYVPDVRWALVKDDGTRGGEKEIRLGH 650

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSEKLA+   L+    + + G+ + V KNLR+CGDCH  IK +S I      VRDA RFH
Sbjct: 651 HSEKLAVAFGLI----STKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFH 706

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSCGDYW
Sbjct: 707 CFKEGQCSCGDYW 719


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/666 (35%), Positives = 369/666 (55%), Gaps = 7/666 (1%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G+ LH   V  GF  +L + + L+D+Y K   +  A  VFDKM +R+ V W  ++ G 
Sbjct: 120 NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGL 179

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           ++N      + +F  M +  V+ +  T++T + A   +  V+ GM I  + +K GF ++ 
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD 239

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V   +I ++SKC  ++ A  +F ++    L+++NA+I+G+   G ++  +  FR++   
Sbjct: 240 YVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVS 299

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G+     T    +      G +     I GF + SG    ++  ++ +L   Y +   + 
Sbjct: 300 GQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSG--TILQPSVSTALTTIYSRLNEID 357

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            AR++FD   +K+V +W+++I GYAQ      A+ LF+++       +   ++S++   A
Sbjct: 358 LARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACA 417

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               +  GK +H          +  VS +++DMY KCG I EA++LF+    KN VTW  
Sbjct: 418 QLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNT 477

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I GYG HG   EA+ LF +ML    +P  V +L+VL ACSH+GLV E  E F  + N  
Sbjct: 478 MIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKY 537

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           R++P  EHY+C+VD LGRAG+L++A   I  MPV+P  A+W TLL AC +H D  L R  
Sbjct: 538 RIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVA 597

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L  LD  N   YV++SNI++   ++ +   +R+  + + L K  G + +EV+   H 
Sbjct: 598 SERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHV 657

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +H  T  I+  L E+  +M+ E+G+      ALHD++EE KE    VHSEKLAI
Sbjct: 658 FVCGDRSHSQTTSIYAKLEELTGKMR-EMGYQSETVTALHDVEEEEKELMFNVHSEKLAI 716

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+      +PG  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ G+C
Sbjct: 717 AFGLI----TTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGIC 772

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 773 SCGDYW 778



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L +G  +H  +       ++ ++  LIDMYAKCG ++ A  +FD   E+N 
Sbjct: 413 LSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNT 472

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W  ++ G+  +G     L LF +M     +P+  T  + + A      V  G +I H 
Sbjct: 473 VTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHA 532

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           M  K   E        ++D+  + G++ +A      MP +
Sbjct: 533 MVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVE 572


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/662 (36%), Positives = 369/662 (55%), Gaps = 40/662 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF  + E N + W  ++ G+  + +  + L L+  M S  + PN +T    +K+   
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR---------------- 169
             + E G QIHG  +K G+E +  V  S+I MY++ GR+ +A +                
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 170 ---------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                          MFD +P K +++WNAMI+GY   G   + L LF++M +    PDE
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + L AC    SV  G Q+H ++   GF  ++K  I  +L+D Y KCG +  A  +F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLK--IVNALIDLYSKCGQVETACGLF 256

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           + +  K V+SW++LI GY       EA+ LF+++       +   + S++   A    ++
Sbjct: 257 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316

Query: 335 QGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K    +    S+  S++DMY KCG I+ A ++FN M  K++ +W  +I G
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A     LF +M  + +EPD + ++ +LSACSHSG ++  +  F  +  D  + P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LG +G   EAK +I++MP++P   IW +LL ACR HG+LEL       L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           ++++ +NP +YV++SNI+A AG W+E  ++R L   KG+KKV G S +E+D E+H F  G
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP   +I+ + +E  + + EE GFV      L +++EE KE +LR HSEKLAI   L
Sbjct: 557 DKLHPRNREIYGM-LEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 615

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    + +PG  + + KNLRVC +CHE  K +SKI K   + RD TRFH F  GVCSC D
Sbjct: 616 I----STKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCND 671

Query: 693 YW 694
           +W
Sbjct: 672 FW 673



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 223/461 (48%), Gaps = 45/461 (9%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K+   + G Q+HG ++K+G+  DL ++  LI MYA+ G +
Sbjct: 58  ISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRL 117

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNA----------------------------- 94
             A  VFD+   R+VVS+TAL+ G+  +GN                              
Sbjct: 118 EDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETG 177

Query: 95  --KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             K  L LF +M  ++V+P+E T+ T + A     SVE G Q+H      GF  N  + N
Sbjct: 178 SYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVN 237

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++ID+YSKCG++  A  +F+ +  K +++WN +I GY       + LLLF++M   GE P
Sbjct: 238 ALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 297

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +    +  SL+D Y KCG +  A +
Sbjct: 298 NDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQ 357

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ +  KS+ SW+++I G+A         +LF ++R+  ++ D      ++   +    
Sbjct: 358 VFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGK 417

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPVK-NVVT 385
           ++ G+ I     +     D  ++  +      +D+    GL  EA E+   MP++ + V 
Sbjct: 418 LDLGRHIFKSMTQ-----DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVI 472

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           W  ++    +HG  + A    R ++   VEP+      +LS
Sbjct: 473 WCSLLKACRRHGNLELAESFARNLM--KVEPENPGSYVLLS 511


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/679 (35%), Positives = 383/679 (56%), Gaps = 20/679 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS       G  +H   +  G   DL ++  L+DMY KC  +  A  +F  M  R+
Sbjct: 16  ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75

Query: 78  VVSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           +V+W A++ G+  +G     ++  L  QM    ++PN  TL   +       ++  G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 136 HGMCMKSGFEWNP----------VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           H  C+++    N           ++G +++DMY+KCG +  A R+FD MPA++ +TW+A+
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 195

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I G+VL     +  LLF+ M   G       +  S L+AC SL  +  G Q+H  L  SG
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               +      SL+  Y K G + +A  +FD +  K  +S+S+L+ GY Q     EA  +
Sbjct: 256 VHADLTA--GNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 313

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F++++  +++ D   + S++   +  A ++ G+  H          +TS+ N+++DMY K
Sbjct: 314 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 373

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ID + ++FN MP +++V+W  +I GYG HGL KEA  LF +M      PDGV ++ +
Sbjct: 374 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 433

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSHSGLV E + +F  + +   + PR+EHY C+VD L R G LDEA   I+SMP++ 
Sbjct: 434 LSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 493

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
            + +W  LL ACRV+ +++LG++V  ++  L  +   N+V++SNI++ AG ++E   +R 
Sbjct: 494 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 553

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + + +G KK  G SW+E++  +H F GGD +HP + +I++ L  +   +K +LG+     
Sbjct: 554 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIK-KLGYQPDTS 612

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L D++EE KE++L  HSEKLAI      G L+    K I V KNLRVCGDCH  IK +
Sbjct: 613 FVLQDLEEEEKEKALICHSEKLAIAY----GILSLSEDKTIFVTKNLRVCGDCHTVIKHI 668

Query: 665 SKILKLVFVVRDATRFHRF 683
           S + +   +VRDA RFH F
Sbjct: 669 SLVKRRAIIVRDANRFHHF 687



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 220/419 (52%), Gaps = 16/419 (3%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V PN +T    +KA   L+    G  IH   + +G + +  V  +++DMY KC  + +AA
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGL--LLFRKMQEHGEIPDEFTFTSTLKACGS 226
            +F  MPA+ L+ WNAM+AGY   G     +  LL  +MQ H   P+  T  + L     
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 227 LGSVGGGTQIHGFLI--------TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
            G++  GT +H + I         S    +   ++  +L+D Y KCG L+ ARRVFD + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ-VDGFVLSSMMGVFADFALVEQGK 337
            ++ ++WS+LI G+     + +A  LF+ +  + L  +    ++S +   A    +  G+
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           Q+HA  AK     D +  NS++ MY K GLID+A  LF+EM VK+ V+++ +++GY ++G
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            A+EA  +F+KM   +VEPD    ++++ ACSH   ++  +     +   + +       
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSIC 364

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           + ++D   + GR+D ++ +   MP +  I  W T+++   +HG   LG+E   + L ++
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 419



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 13/315 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A +LR C+    L  G QLH  L K G   DL   N L+ MYAK G ++ A A+FD+M 
Sbjct: 228 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 287

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VS++AL+ G++QNG A+    +F +M + +V+P+  T+ + I A   L+++++G  
Sbjct: 288 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 347

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG  +  G      + N++IDMY+KCGRI+ + ++F++MP++ +++WN MIAGY + G 
Sbjct: 348 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSV 249
             +   LF +M   G  PD  TF   L AC   G V  G        HG+ +T    + +
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQL 308
                  +VD   + G L EA      +  ++ V  W +L+      +N+    ++ R +
Sbjct: 468 ------CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMI 521

Query: 309 RERSLQVDG-FVLSS 322
           +E   +  G FVL S
Sbjct: 522 QELGPEGTGNFVLLS 536



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 20/298 (6%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M  H   P+ +TF   LKAC +L     G  IH   I +G        ++ +L+D YVKC
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGL--QADLFVSTALLDMYVKC 58

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQE--ENLAEAMELFRQLRERSLQVDGFVLSS 322
            CL +A  +F  +  + +++W++++ GYA     + A A  L  Q++   L+ +   L +
Sbjct: 59  ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 323 MMGVFADFALVEQGKQIHAYAAKV---PSGLDTS-------VSNSIVDMYLKCGLIDEAT 372
           ++ + A    + QG  +HAY  +    P+    S       +  +++DMY KCG +  A 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML---LDDVEPDGVAYLAVLSACS 429
            +F+ MP +N VTW+ +I G+       +A  LF+ ML   L  + P  +A  + L AC+
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACA 236

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
               +   ++  + L     +   +   + ++    +AG +D+A  L + M VK +++
Sbjct: 237 SLDHLRMGEQLHALLAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVS 293


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/664 (34%), Positives = 372/664 (56%), Gaps = 12/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  +++     D    + ++   A    G +  A  VF+++      +  +++ G+  
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  +  +  M    + P+ FT  +  K+ GVL     G Q+H    K GF  +  +
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLC---EGKQLHCHSTKLGFASDAYI 174

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++++MYS CG +  A ++FD M  KS+++W  MI  Y       + + LFR+M+    
Sbjct: 175 QNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASV 234

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+E T  + L AC     +    Q+H ++  +G  +   TV+  +L+D Y KCGC   A
Sbjct: 235 KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGF--HTVLTSALMDVYCKCGCYPLA 292

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +F+ + +K++  W+ +I G+ ++ +  EA+ LF +++   ++ D   ++S++      
Sbjct: 293 RDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHL 352

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +E GK +H Y  K    +D ++  ++VDMY KCG I+ A  +F EMP K+V+TWT +I
Sbjct: 353 GALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALI 412

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G    G   +A+ LF +M + +V+PD + ++ VL+ACSH+GLV E   YF+ + N   +
Sbjct: 413 VGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGI 472

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P IEHY C+VD LGRAGR+ EA++LI++MP+ P   +   LLSACR+HG+L +     +
Sbjct: 473 QPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQ 532

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ LD  N   YV++SNI++   +W   +++R+L   + +KK  G S +EV   +H F 
Sbjct: 533 QLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFV 592

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP + +I++ L +M +R+K   G+V      L D+ E+ KE  L +HSEKLAI  
Sbjct: 593 KGDVSHPQSSEIYETLDDMMRRLKSA-GYVPDKSEVLFDMDEKEKENELSLHSEKLAIAF 651

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L    L+  PG  IRV KNLRVC DCH  +K +S++     +VRD  RFH F  G CSC
Sbjct: 652 GL----LSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 707

Query: 691 GDYW 694
            D+W
Sbjct: 708 RDFW 711



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 189/354 (53%), Gaps = 9/354 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLH    K+GF+ D  + N L++MY+ CG +  A  VFDKM+ ++VVSW  ++  + Q
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
                  + LF +M  +SVKPNE TL   + A      +E   Q+H    ++G  ++ V+
Sbjct: 216 WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVL 275

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++++D+Y KCG    A  +F+ MP K+L  WN MI G+V     ++ L LF +MQ  G 
Sbjct: 276 TSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 335

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D+ T  S L AC  LG++  G  +H ++        V   +  +LVD Y KCG +  A
Sbjct: 336 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI--EVDVALGTALVDMYAKCGSIESA 393

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            RVF  + +K V++W++LI+G A      +A+ELF +++   ++ D      ++   +  
Sbjct: 394 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 453

Query: 331 ALVEQGKQIHAYAAKVPS--GLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV 380
            LV +G    AY   +P+  G+  S+ +   +VDM  + G I EA +L   MP+
Sbjct: 454 GLVNEGI---AYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 504



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 139/267 (52%), Gaps = 8/267 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L  C+++  L+   Q+H  + + G  F  +L + L+D+Y KCG    A  +F+KM 
Sbjct: 241 LVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP 300

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+N+  W  ++ G +++ + +  LSLF +M  S VK ++ T+++ + A   L ++E G  
Sbjct: 301 EKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKW 360

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K   E +  +G +++DMY+KCG I  A R+F  MP K ++TW A+I G  + G 
Sbjct: 361 LHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQ 420

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K L LF +MQ     PD  TF   L AC   G V  G     +  +    Y ++  I 
Sbjct: 421 GLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI---AYFNSMPNKYGIQPSIE 477

Query: 255 --GSLVDFYVKCGCLVEARRVFDLIEQ 279
             G +VD   + G + EA    DLI+ 
Sbjct: 478 HYGCMVDMLGRAGRIAEAE---DLIQN 501



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++  +A  L  C+    L+ G  LH  + K     D+ L   L+DMYAKCG +  A  VF
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
            +M E++V++WTAL+ G    G     L LF +M  S VKP+  T    + A      V 
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457

Query: 131 NGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            G+   + M  K G + +      ++DM  + GRI EA  +   MP
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/653 (36%), Positives = 357/653 (54%), Gaps = 7/653 (1%)

Query: 42  GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF 101
           GF  DL + + ++  Y K   +  A  VFD MLER+ V W  ++ G ++N      + +F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195

Query: 102 CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC 161
             M    +  +  T++  +     L  +  GM I  + MK GF  +  V   +  +YSKC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G I  A  +F  +    L+++NAMI+GY     ++  + LF+++   GE  +  +    +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
                 G +     IHGF   SG   +     A  L   Y +   +  AR +FD   +KS
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTA--LTTVYSRLNEIESARLLFDESSEKS 373

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           + SW+++I GYAQ     +A+ LF+++++  ++ +   ++S++   A    +  GK +H 
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
              +     +  VS +++DMY KCG I EA  LF+ MP KN VTW  +I+GYG HG   E
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHE 493

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF +ML   V P GV +L+VL ACSH+GLV E  E F  + +D   +P  EHY+C+V
Sbjct: 494 ALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMV 553

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGRAG LD+A + I  MPV+P   +W  LL AC +H D  L R   + L  LD  N  
Sbjct: 554 DLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVG 613

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            YV++SNI++   ++ E   +R + + + L K  G + +EV   +H F  GD +HP    
Sbjct: 614 YYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATA 673

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I+ +L ++  +M+E  GF      ALHD++EE KE  ++VHSEKLAI   L+      +P
Sbjct: 674 IYAMLEKLTGKMREA-GFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLI----TSEP 728

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ G+CSCGDYW
Sbjct: 729 GTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 225/469 (47%), Gaps = 8/469 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H  ++  G   DL+    L    +    ++ A  +F  +   ++  +  L+  F  N 
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 93  NAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           +  + +SL+  +  S+ ++P+ FT +  I  +  L             + +GF  +  VG
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHA---HSIVAGFGSDLFVG 144

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++I+  Y K  R+  A ++FD M  +  + WN M++G V     D+ +L+F  M + G  
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D  T  + L     L  +  G  I    +  GF +S   VI G L   Y KCG +  AR
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGF-HSHAYVITG-LACLYSKCGEIETAR 262

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F  I Q  ++S++++I GY        ++ LF++L     +V+   +  ++ VF  F 
Sbjct: 263 LLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFG 322

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +   + IH +  K     ++SVS ++  +Y +   I+ A  LF+E   K++ +W  +I+
Sbjct: 323 HLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMIS 382

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY ++GL ++A+ LF++M   +V P+ V   ++LSAC+  G +   + +   L N +  +
Sbjct: 383 GYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK-WVHDLINRESFE 441

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             I   + ++D   + G + EA+ L   MP K ++  W  ++S   +HG
Sbjct: 442 SNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVT-WNAMISGYGLHG 489



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +H  + +  F  ++ ++  LIDMYAKCG +  A  +F  M E+N 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W A++ G+  +G     L+LF +M  S V P   T  + + A      V  G +I   
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M    GFE  P     ++D+  + G +++A      MP +     W A++  
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGA 587


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/660 (35%), Positives = 376/660 (56%), Gaps = 8/660 (1%)

Query: 31   GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            G+  HG LVK+GF     + N LI  YAK   ++ A  VFD+M  ++ +SW +++ G   
Sbjct: 429  GLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTS 488

Query: 91   NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            NG     + LF +M     + +  TL + + A         G  +HG  +K+G      +
Sbjct: 489  NGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSL 548

Query: 151  GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             N+++DMYS C   +   ++F  M  K++++W AMI  Y  AG  DK   L ++M   G 
Sbjct: 549  ANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGI 608

Query: 211  IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             PD F  TS L       S+  G  +HG+ I +G    +   +A +L++ YV C  + EA
Sbjct: 609  KPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLP--VANALMEMYVNCRNMEEA 666

Query: 271  RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R VFD +  K +ISW++LI GY++     E+  LF  +  +  + +   ++ ++   A  
Sbjct: 667  RLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASI 725

Query: 331  ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
            + +E+G++IHAYA +     D+  SN++VDMY+KCG +  A  LF+ +  KN+++WT++I
Sbjct: 726  SSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 785

Query: 391  TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             GYG HG  K+AV LF +M    VEPD  ++ A+L AC HSGL  E  ++F+ +  + ++
Sbjct: 786  AGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKI 845

Query: 451  KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            +P+++HY+CIVD L   G L EA   IESMP++P  +IW +LL  CR+H D++L  +V +
Sbjct: 846  EPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVAD 905

Query: 511  ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
             + +L+ +N   YV+++NI+A+A  W   ++L+     +GL++  G SW+EV  ++H F 
Sbjct: 906  RVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFI 965

Query: 571  GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
              +  HP   +I + L  + +RM+EE G     KY+L    +   +E+L  HS KLA+  
Sbjct: 966  ADNRNHPEWNRIAEFLDHVARRMREE-GHDPKKKYSLMGANDAVHDEALCGHSSKLAVTF 1024

Query: 631  ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
                G L+   G+ IRV KN +VC  CHE  K +SK+     ++RD++RFH FEGG CSC
Sbjct: 1025 ----GVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 262/541 (48%), Gaps = 46/541 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFS--FDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           ++ C +   L+   + H ALV+ G       +L   L+  Y KCG++ GA  VFD+M  R
Sbjct: 101 VQLCGEERSLEAARRAH-ALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159

Query: 77  --NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             +V  WT+LM  + + G+ +  +SLF QM    V P+   +S  +K    L S+  G  
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+  K G      V N++I +YS+CG + +A ++FD M A+  I+WN+ I+GY   G+
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D+ + LF KM   G      T  S L AC  LG    G  +HG+ + SG  + +++V +
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 255 G-------SLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFR 306
           G        LV  YVKCG +  ARRVFD +  K +V  W+ ++ GYA+     E++ LF 
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           Q+ E  +  D   LS ++      +    G   H Y  K+  G   +V N+++  Y K  
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +ID A  +F+ MP ++ ++W  +I+G   +GL  EA+ LF +M +   E D    L+VL 
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519

Query: 427 ACSHS----------------GLVEESQEYFSRL-----CND---------KRMKPRIEH 456
           AC+ S                GL+ E+    + L     C+D            +  +  
Sbjct: 520 ACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579

Query: 457 YSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           ++ ++ S  RAG  D+   L++ M    +KP +    ++L        L+ G+ V    +
Sbjct: 580 WTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAI 639

Query: 514 R 514
           R
Sbjct: 640 R 640


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/686 (34%), Positives = 395/686 (57%), Gaps = 21/686 (3%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C  +NL  +    +HG +VK GF  DL +   L+++Y+KCG M  A  VFD +  RNV +
Sbjct: 68  CIDRNLATE-ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNA 126

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT L+ G++QN +    L LF +M  +   P+ +TL   + A   L S+E G Q+H   +
Sbjct: 127 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 186

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K   +++  +GNS+   YSK  R+  A + F ++  K +I+W ++I+     G + + L 
Sbjct: 187 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 246

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
            F  M   G  P+E+T TS L AC  + ++  G QIH   I  G+  S+  +I  S++  
Sbjct: 247 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI--LIKNSIMYL 304

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-----------AMELFRQLR 309
           Y+KCG L+EA+++F+ +E  ++++W+++I G+A+  +LAE           A+ +F++L 
Sbjct: 305 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 364

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              ++ D F  SS++ V ++   +EQG+QIH    K     D  V  ++V MY KCG ID
Sbjct: 365 RSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSID 424

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A++ F EMP + +++WT +ITG+ +HGL+++A+ LF  M L  ++P+ V ++ VLSACS
Sbjct: 425 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 484

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+GL +E+  YF  +     +KP ++H++C++D   R GR++EA +++  M  +P+  IW
Sbjct: 485 HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIW 544

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             L++ CR HG  +LG    E LL+L   +   YV + N+H  AG W +  ++RKL + +
Sbjct: 545 SMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEE 604

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF--VYGVKYAL 607
            + K+   SW+ + ++++ F   D +H  + +++++L  +   +K  LG+  +  V+   
Sbjct: 605 KVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVK-ALGYEPIEDVEVIE 663

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            +  EE    S  +HSEKLAI   L    LN      IRV K++ +C DCH FI+ +S +
Sbjct: 664 KEENEERVLSSTVLHSEKLAIAFGL----LNLPTATPIRVVKSITMCRDCHNFIRFISLL 719

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDY 693
                V+RD+ + H+F  G CSCG Y
Sbjct: 720 KGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 227/424 (53%), Gaps = 22/424 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    +++G Q+H  L+K    FD  + N L   Y+K   +  A   F  + E++V
Sbjct: 166 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 225

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWT+++     NG A   LS F  M S  +KPNE+TL++ + A  V+ +++ G QIH +
Sbjct: 226 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 285

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV-------- 190
            +K G+  + ++ NSI+ +Y KCG + EA ++F+ M   +L+TWNAMIAG+         
Sbjct: 286 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 345

Query: 191 -LAGYS--DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +A +      L +F+K+   G  PD FTF+S L  C +L ++  G QIHG +I SG   
Sbjct: 346 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA 405

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V  V+  +LV  Y KCG + +A + F  +  +++ISW+S+I G+A+     +A++LF  
Sbjct: 406 DV--VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFED 463

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLK 364
           +R   ++ +      ++   +   L ++         K   +   +D      ++DMYL+
Sbjct: 464 MRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA--CLIDMYLR 521

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV-AYL 422
            G ++EA ++ ++M  + N   W+++I G   HG  K  +G +    L  ++P  V  Y+
Sbjct: 522 LGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPKDVETYV 579

Query: 423 AVLS 426
           ++L+
Sbjct: 580 SLLN 583



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 161/308 (52%), Gaps = 23/308 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+ +S  +      L   L  C   L LD G Q+H   +K+G+   +++ N ++ +Y KC
Sbjct: 249 MDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKC 308

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQ-----------NGNAKACLSLFCQMGSSSV 109
           G +  A  +F+ M   N+V+W A++ G  +           + +    L++F ++  S +
Sbjct: 309 GWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGM 368

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           KP+ FT S+ +     L ++E G QIHG  +KSG   + VVG +++ MY+KCG I++A++
Sbjct: 369 KPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASK 428

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
            F  MP++++I+W +MI G+   G S + L LF  M+  G  P++ TF   L AC   G 
Sbjct: 429 AFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 488

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSV----I 283
                 ++ F +     Y++K V+     L+D Y++ G + EA   FD++ + +      
Sbjct: 489 --ADEALYYFELMQK-QYNIKPVMDHFACLIDMYLRLGRVEEA---FDVVHKMNFEPNET 542

Query: 284 SWSSLILG 291
            WS LI G
Sbjct: 543 IWSMLIAG 550


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/733 (35%), Positives = 395/733 (53%), Gaps = 53/733 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MN++S++L    QR    L+ C     L  G  LH   +K         +N  I +Y+KC
Sbjct: 1   MNQISWTL----QRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKC 56

Query: 61  GEM------------------NGACA-------------VFDKMLERNVVSWTALMCGFL 89
           G +                  N   A             +FD++ E ++VS+  L+  + 
Sbjct: 57  GRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYA 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G     L LF  M    +  + FTLS  I A      V    Q+H + + SGF+    
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDGFTLSAVITA--CCDDVGLIGQLHSVAVSSGFDSYVS 174

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           V N+++  Y K G +++A R+F  M   +  ++WN+MI  Y       K L LF++M   
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC-L 267
           G   D FT  S L A   L  + GG Q HG LI +GF  +  + +   L+D Y KCG  +
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN--SHVGSGLIDLYSKCGGGM 292

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQ-EENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            + R+VF+ I +  ++ W++++ GY+Q EE L +A+E FRQ++    + +      ++  
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352

Query: 327 FADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
            ++ +   QGKQIH+ A K  +PS    SV N+++ MY KCG + +A  LF+ M   N V
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSN-RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV 411

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +   +I GY +HG+  E++ LF+ ML   + P  + +++VLSAC+H+G VEE   YF+ +
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                ++P  EHYSC++D LGRAG+L EA+NLI  MP  P    W +LL ACR HG++EL
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIEL 531

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
             +    +L+L+  N   YV++SN++A AG W E   +RK  R +G+KK  G SW+EV K
Sbjct: 532 AVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKK 591

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEESKEESLRV-- 621
            IH F   D +HP+ ++I++ L EM  +MK   G+V  V++AL  D      E+ +R+  
Sbjct: 592 RIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRA-GYVPDVRWALVKDDGTRGGEKEIRLGH 650

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSEKLA+   L+    + + G+ + V KNLR+CGDCH  IK +S I      VRDA RFH
Sbjct: 651 HSEKLAVAFGLI----STKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFH 706

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSCGDYW
Sbjct: 707 CFKEGQCSCGDYW 719


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/681 (34%), Positives = 382/681 (56%), Gaps = 7/681 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
           L+  L  C+K L ++ G  +     ++GF  D+++   LI ++AKCG +  A +VF  M 
Sbjct: 71  LSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMG 130

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+++S TA++  ++++G     L  + +M S  ++P+ FT +  + A      + +G 
Sbjct: 131 AMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGK 190

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            IH   ++S    N  V N++I MY+KCG + ++  +F  M  K +++WNAMIA Y L G
Sbjct: 191 HIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYG 250

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +      LF +M   G  PD +TF+S L AC S   +  G  +H  +   GF       +
Sbjct: 251 HDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDF--AM 308

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+  + +CG L  ARR F  IE+K + +W++++  YAQ +   +A+ L++ +     
Sbjct: 309 QNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGF 368

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D F  SS++   A    + +GK IH  +       D  +  ++V+MY KCG + +A +
Sbjct: 369 TPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKK 428

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F+ +  K+VV+W+ +I    +HG A+EA+ L   M L  +  + V   +VL ACSH G 
Sbjct: 429 SFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGR 488

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           + E  +YF  L  D  ++   E+    +D LGRAG L EA++++ +MP K S     TLL
Sbjct: 489 LYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLL 548

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
             C+VHGD+  G+ + + ++ L+ +NP +YV+++N++A AG W++  +LR+  R KG+K+
Sbjct: 549 GGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKR 608

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G S +E   +I+ F  GD ++P   +I   L  +  RMKEE G+V   +   HD+ ++
Sbjct: 609 QTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDD 668

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KEE L+ HSEK+A+G  L+       PG  +R+ KNLRVC DCH   K  SKI     +
Sbjct: 669 KKEELLKFHSEKMAMGFGLI----TSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRII 724

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD TRFH FEGG+CSCGDYW
Sbjct: 725 VRDGTRFHHFEGGICSCGDYW 745



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 240/488 (49%), Gaps = 8/488 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D  L N +I MY KC     A  VFD++ +RN  SW+ L+  ++QN   +  L ++ +M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              +  + +TLS+ + A   L  VE G  +     + GFE + VV  S+I +++KCG + 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 166 EAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           EA  +F  M A + +I+  AMI  YV  G +D  L  + KM+  G  PD FT+ + L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            S   +  G  IH  ++ S    ++   +  +L+  Y KCG L +++ +F  ++ K V+S
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNIS--VRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I  Y    +  +A  LF ++       D +  SS++G  A    +E G+ +H    
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
                 D ++ N+++ M+ +CG ++ A   F  +  K +  W  ++  Y +    K+A+ 
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALF 358

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDS 463
           L++ MLL+   PD   + +V+ +C+  G + E +  F   C+     +  +   + +V+ 
Sbjct: 359 LYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK--FIHECSTSCGFEKDVILGTALVNM 416

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
             + G L +AK   + +  K  ++ W  +++A   HG  E   E+   L+ L G      
Sbjct: 417 YAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQHGHAEEALELSH-LMNLQGIAQNEV 474

Query: 524 VMMSNIHA 531
              S +HA
Sbjct: 475 TASSVLHA 482


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/697 (34%), Positives = 387/697 (55%), Gaps = 43/697 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + LI+        +G   A +VF+ + E N++ W  +  G   
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     +   G QIHG  +K G++ +  V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 151 GNSIIDMYSKCGRINE-------------------------------AARMFDVMPAKSL 179
             S+I MY + GR+ +                               A +MFD +P K +
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+GY   G + + L LF++M +    PDE T  S + AC    S+  G Q+H +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y+KCG +  A  +F+ +  K VISW++LI GY       
Sbjct: 246 IDDHGFGSNLK--IVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           EA+ LF+++       +   + S++   A    +E G+ IH Y  K   G+  + S+  S
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++F+ +  +++ +W  +I G+  HG A  A  +F +M  +++EPD
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D ++ P++EHY C++D LG +G   EA+ +I
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            +M ++P   IW +LL AC++HG++ELG    + L++++  NP +YV++SNI+A AG WN
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  ++R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  ++E  
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEA- 602

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 603 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 658

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   + RD TRFH F  GVCSC DYW
Sbjct: 659 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 232/494 (46%), Gaps = 76/494 (15%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD------- 71
           L+ C+K+     G Q+HG ++K+G+  DL ++  LI MY + G +  A  VFD       
Sbjct: 95  LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154

Query: 72  --------------------KMLE----RNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
                               KM +    ++VVSW A++ G+ + GN K  L LF +M  +
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           +V+P+E T+ + + A    +S+E G Q+H      GF  N  + N++ID+Y KCG +  A
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ +  K +I+WN +I GY       + LLLF++M   GE P++ T  S L AC  L
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G  IH ++       +  +    SL+D Y KCG +  A++VFD I  +S+ SW++
Sbjct: 335 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 394

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I G+A       A ++F ++R+  ++ D            D   V              
Sbjct: 395 MIFGFAMHGRANAAFDIFSRMRKNEIEPD------------DITFV-------------- 428

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-----WTVIITGYGKHGLAKEA 402
            GL ++ S+S        G++D    +F  M     +T     +  +I   G  GL KEA
Sbjct: 429 -GLLSACSHS--------GMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
             +   M   ++EPDGV + ++L AC   G VE  + Y   L   +   P    Y  + +
Sbjct: 480 EEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNP--GSYVLLSN 534

Query: 463 SLGRAGRLDEAKNL 476
               AGR +E   +
Sbjct: 535 IYATAGRWNEVAKI 548


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/678 (37%), Positives = 385/678 (56%), Gaps = 32/678 (4%)

Query: 36  GALVKMGFSFDL------MLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G+L     SFDL         N LI+ YAK   ++ A  VFD++ + ++VS+  L+  + 
Sbjct: 58  GSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYA 117

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G  +  L LF ++       + FTLS  I A G    V    Q+H   +  G++    
Sbjct: 118 DRGECRPALRLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYAS 175

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVLAGYSDKGLL---LFR 203
           V N+++  YS+ G +NEA R+F  M     +  ++WNAMI   V  G   +GL    LFR
Sbjct: 176 VNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMI---VACGQHREGLEAVELFR 232

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G   D FT  S L A   +  + GG Q HG +I SGF     + +   L+D Y K
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGF--HGNSHVGSGLIDLYSK 290

Query: 264 C-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLS 321
           C G +VE R+VF+ I    ++ W+++I G++Q E+L+E  +  FR+++      D     
Sbjct: 291 CAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFV 350

Query: 322 SMMGVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +    ++ +    GKQ+HA A K  +P     SV+N++V MY KCG + +A  +F+ MP
Sbjct: 351 CVTSACSNLSSPSVGKQVHALAIKSDIPYN-RVSVNNALVAMYSKCGNVHDARRVFDTMP 409

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             N+V+   +I GY +HG+  E++ LF  ML  D+ P+ + ++AVLSAC H+G VEE Q+
Sbjct: 410 EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK 469

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF+ +    R++P  EHYSC++D LGRAG+L EA+ +IE+MP  P    W TLL ACR H
Sbjct: 470 YFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
           G++EL  +     L+L+  N   YVM+SN++A A  W E   +++L R +G+KK  G SW
Sbjct: 530 GNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSW 589

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL---HDIQEESKE 616
           +E+DK++H F   D +HP+ ++IH  + E+ ++MK+  G+V  +++AL    +++ + KE
Sbjct: 590 IEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQA-GYVPDIRWALVKDEEVEPDEKE 648

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+   L+    + +    I V KNLR+CGDCH  IK +S I      VRD
Sbjct: 649 RRLLYHSEKLAVAFGLI----STEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRD 704

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F+ G CSCGDYW
Sbjct: 705 THRFHCFKEGHCSCGDYW 722



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 218/472 (46%), Gaps = 42/472 (8%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           T    +KA      +  G  +H +  KS    +  + N    +YSKCG ++ A   FD+ 
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 175 PAKSLITWNAMIAGY--------------------------VLAGYSDKG-----LLLFR 203
              ++ ++N +I  Y                          ++A Y+D+G     L LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +++E     D FT +  + ACG    VG   Q+H F++  G  Y     +  +++  Y +
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCG--YDCYASVNNAVLACYSR 186

Query: 264 CGCLVEARRVFDLIEQ---KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
            G L EARRVF  + +   +  +SW+++I+   Q     EA+ELFR++  R L+VD F +
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC-GLIDEATELFNEMP 379
           +S++  F     +  G Q H    K     ++ V + ++D+Y KC G + E  ++F E+ 
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA 306

Query: 380 VKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V W  +I+G+ ++  L+++ +  FR+M  +   PD  +++ V SACS+       +
Sbjct: 307 APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGK 366

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  +          R+   + +V    + G + +A+ + ++MP    +++  ++++    
Sbjct: 367 QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSL-NSMIAGYAQ 425

Query: 499 HGDLELGREVGEILLRLD-GDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           HG       + E++L+ D   N + ++ + +     G   E ++   + + +
Sbjct: 426 HGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKER 477



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 7/272 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERNVVS 80
           C K+L+   G+Q HG ++K GF  +  + + LID+Y+KC G M     VF+++   ++V 
Sbjct: 255 CVKDLV--GGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVL 312

Query: 81  WTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           W  ++ GF Q  + ++  +  F +M  +   P++ +      A   LSS   G Q+H + 
Sbjct: 313 WNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALA 372

Query: 140 MKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           +KS   +N V V N+++ MYSKCG +++A R+FD MP  ++++ N+MIAGY   G   + 
Sbjct: 373 IKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVES 432

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M +    P+  TF + L AC   G V  G Q +  ++   F    +      ++
Sbjct: 433 LRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAEHYSCMI 491

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           D   + G L EA R+ + +      I W++L+
Sbjct: 492 DLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/620 (37%), Positives = 354/620 (57%), Gaps = 8/620 (1%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           R+  S+  L+  FL+ G+ +  L LF +M   ++V P++ T++  +K+   +  +  G  
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +     K GF  +  V NS+I MY+ CG +  A  +F  +  K +I WNAMIAGYV  G 
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + +F+ M E     DE T  S   ACG LG    G  I  +    G   S    +A
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN--LA 310

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LVD Y KCG L +ARR+FD +  + V++WS++I GY Q +   EA+ +F +++   + 
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   + S++   A    +E GK +H+Y  +    L   +  ++VD Y KCG I +A + 
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  MPV+N  TWT +I G   +G ++EA+ LF  ML  ++EP  V ++ VL ACSH  LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE + +F+ +  D  + PRIEHY C+VD LGRAG +DEA   I +MP++P+  +W+ LLS
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC VH ++E+G E  + ++ LD  +  NY+++SN +A  G W     +RK  + KG++K+
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G S +E++  I  F+  D  HP   +I++ + EM + +K  +G++     A  D+ E  
Sbjct: 611 PGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIK-MVGYIPNTADARLDVDEYE 669

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K+ S+  HSEKLAI   L++     +PG  IR+ KNLRVC DCH   K +SK+     +V
Sbjct: 670 KQVSVSHHSEKLAIAFGLMKS----RPGATIRLSKNLRVCIDCHSATKLISKVYNREIIV 725

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RD  RFH F+ G+CSC DYW
Sbjct: 726 RDRNRFHHFKDGLCSCNDYW 745



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 207/393 (52%), Gaps = 6/393 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           ++  ++  +A++++ CS+   L  G  +     K GF  D  + N LI MYA CG++  A
Sbjct: 166 AVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAA 225

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  +  + V++W A++ G+++NG+ K  + +F  M       +E TL +   A G L
Sbjct: 226 HVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRL 285

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
                G  I     + G   +  +  +++DMY+KCG +++A R+FD M ++ ++ W+AMI
Sbjct: 286 GDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMI 345

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY  +    + L +F +MQ     P++ T  S L AC  LG++  G  +H ++     P
Sbjct: 346 SGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLP 405

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +V  ++  +LVDFY KCGC+ +A + F+ +  ++  +W++LI G A      EA+ELF 
Sbjct: 406 LTV--ILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFS 463

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
            + E +++        ++   +   LVE+G++ H  +     G+   + +   +VD+  +
Sbjct: 464 SMLEANIEPTDVTFIGVLLACSHGCLVEEGRR-HFTSMTQDYGICPRIEHYGCMVDLLGR 522

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            GLIDEA +    MP++ N V W  +++    H
Sbjct: 523 AGLIDEAYQFIRNMPIEPNAVVWRALLSACTVH 555


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/708 (34%), Positives = 393/708 (55%), Gaps = 54/708 (7%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            LH   VK G    L   N L+ +YAK   M  A  +FD++ +RN  +WT L+ GF + G+
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            ++   +LF +M +    PN++TLS+ +K   + ++++ G  +H   +++G + + V+GNS
Sbjct: 371  SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-------- 205
            I+D+Y KC     A R+F++M    +++WN MI  Y+ AG  +K L +FR++        
Sbjct: 431  ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 206  ------------QEHG--------EIPDEF---TFTSTLKACGSLGSVGGGTQIHGFLIT 242
                        + H         E   EF   TF+  L    SL  V  G Q+HG ++ 
Sbjct: 491  NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-----DLIEQKS-----------VISWS 286
             GF       I  SLV+ Y KCG + +A  +      D++ + +           ++SW 
Sbjct: 551  FGF--DSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWG 608

Query: 287  SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
            S++ GY       + ++ FR +    + VD   +++++   A+  ++E G+ +HAY  K+
Sbjct: 609  SMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI 668

Query: 347  PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +D  V +S++DMY K G +D+A  +F +    N+V WT +I+GY  HG    A+GLF
Sbjct: 669  GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLF 728

Query: 407  RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             +ML   + P+ V +L VL+ACSH+GL+EE   YF  + +   + P +EH + +VD  GR
Sbjct: 729  EEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 467  AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            AG L + KN I    +    ++W++ LS+CR+H ++E+G+ V E+LL++   +P  YV++
Sbjct: 789  AGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848

Query: 527  SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
            SN+ A    W+E  R+R L   +G+KK  G+SW+++  +IH F  GD +HP  ++I+  L
Sbjct: 849  SNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYL 908

Query: 587  MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
              +  R+K E+G+ + VK  + D++EE  E  +  HSEKLA+   ++    N  P   IR
Sbjct: 909  DILIGRLK-EIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTA-NRTP---IR 963

Query: 647  VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + KNLR+C DCH FIK  S++L    +VRD  RFH F+ G CSCGDYW
Sbjct: 964  IIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 217/437 (49%), Gaps = 64/437 (14%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            FTLS +    G L         H + +K+G        N ++ +Y+K   +  A ++FD
Sbjct: 298 HFTLSNSPPPLGTL---------HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFD 348

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            +P ++  TW  +I+G+  AG S+    LFR+MQ  G  P+++T +S LK C    ++  
Sbjct: 349 EIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQL 408

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  +H +++ +G    V  V+  S++D Y+KC     A R+F+L+ +  V+SW+ +I  Y
Sbjct: 409 GKGVHAWMLRNGI--DVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAY 466

Query: 293 AQEENLAEAMELFRQLRERSLQ-----VDGFV--------------------------LS 321
            +  ++ +++++FR+L  + +      VDG +                           S
Sbjct: 467 LRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFS 526

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV- 380
             + + +  + VE G+Q+H    K     D  + +S+V+MY KCG +D+A+ +  ++P+ 
Sbjct: 527 IALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLD 586

Query: 381 ---------------KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
                            +V+W  +++GY  +G  ++ +  FR M+ + V  D      ++
Sbjct: 587 VLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTII 646

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVK 483
           SAC+++G++E  +   + +   +++  RI+ Y  S ++D   ++G LD+A  ++     +
Sbjct: 647 SACANAGILEFGRHVHAYV---QKIGHRIDAYVGSSLIDMYSKSGSLDDAW-MVFRQSNE 702

Query: 484 PSIAIWQTLLSACRVHG 500
           P+I +W +++S   +HG
Sbjct: 703 PNIVMWTSMISGYALHG 719



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 219/474 (46%), Gaps = 56/474 (11%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+CCS +  L  G  +H  +++ G   D++L N ++D+Y KC     A  +F+ M 
Sbjct: 393 LSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMN 452

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP----------------------- 111
           E +VVSW  ++  +L+ G+ +  L +F ++    V                         
Sbjct: 453 EGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYC 512

Query: 112 -----NEF---TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                 EF   T S  +  +  LS VE G Q+HGM +K GF+ +  + +S+++MY KCGR
Sbjct: 513 MVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGR 572

Query: 164 INEAARM-----FDVM-----------PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           +++A+ +      DV+           P   +++W +M++GYV  G  + GL  FR M  
Sbjct: 573 MDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR 632

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              + D  T T+ + AC + G +  G  +H ++   G  + +   +  SL+D Y K G L
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIG--HRIDAYVGSSLIDMYSKSGSL 690

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +A  VF    + +++ W+S+I GYA       A+ LF ++  + +  +      ++   
Sbjct: 691 DDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNAC 750

Query: 328 ADFALVEQG---KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
           +   L+E+G    ++   A  +  G++     S+VD+Y + G + +      +  + ++ 
Sbjct: 751 SHAGLIEEGCRYFRMMKDAYCINPGVEH--CTSMVDLYGRAGHLTKTKNFIFKNGISHLT 808

Query: 385 T-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           + W   ++    H    E      +MLL     D  AY+ + + C+ +   +E+
Sbjct: 809 SVWKSFLSSCRLHK-NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEA 861


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/708 (34%), Positives = 391/708 (55%), Gaps = 56/708 (7%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            LH  L+K G     +  N L+++YAK   +  A  +F+++ + +V SWT L+ GF + G 
Sbjct: 310  LHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   L LF +M    V PN+FTLS  +K+ S  ++    G  IHG  +++G + + V+ N
Sbjct: 368  SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 153  SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR--------- 203
            SI+D Y KC     A ++F +M  K  ++WN M++ Y+  G   K + LFR         
Sbjct: 428  SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAAS 487

Query: 204  ----------------------KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
                                  KM   G   ++ TF+  L    SL  +G G QIH  ++
Sbjct: 488  WNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVL 547

Query: 242  TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV---------------ISWS 286
              G        +  SL+D Y KCG + +A  +F  + Q+S                +SWS
Sbjct: 548  KVGVLDD--GFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWS 605

Query: 287  SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
            S++ GY Q     +A++ F  +    ++VD F L+S++   A   ++E G+Q+H Y  K+
Sbjct: 606  SMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKI 665

Query: 347  PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
              GLD  + +SI+DMY+KCG +++A  +FN+   +NVV WT +I+G   HG  +EAV LF
Sbjct: 666  GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 407  RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
              M+ + + P+ V+++ VL+ACSH+GL+EE  +YF  +     ++P  EH++C+VD  GR
Sbjct: 726  ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGR 785

Query: 467  AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            AGRL+E K  I +  +    ++W++ LS+CRVH ++E+G  V + LL L+  +   Y++ 
Sbjct: 786  AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845

Query: 527  SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
            S+I A    W E  ++R L + +G+KK   +SW+++  ++H F  GD +HP   KI+  L
Sbjct: 846  SSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYL 905

Query: 587  MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
             E+  R+K E+G+   V   + D+++E ++  L  HSEKLAI   ++    +  PG  IR
Sbjct: 906  DELIGRLK-EIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGII----STAPGTPIR 960

Query: 647  VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            V KNLRVC DCH FIK  S++L    ++RD  RFH F+ G CSC DYW
Sbjct: 961  VMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 217/476 (45%), Gaps = 56/476 (11%)

Query: 15  LADSLRCCSKNLLLD-YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           L+  L+ CS N+     G  +HG +++ G   D +LNN ++D Y KC     A  +F  M
Sbjct: 390 LSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLM 449

Query: 74  LERNVVSWTALMCGFLQ-------------------------------NGNAKACLSLFC 102
            E++ VSW  +M  +LQ                               NG  +  L L  
Sbjct: 450 AEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLY 509

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M ++    N+ T S  +  +  LS +  G QIH   +K G   +  V NS+IDMY KCG
Sbjct: 510 KMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCG 569

Query: 163 RINEAARMFDVMPAKS---------------LITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            + +A+ +F  +P +S                ++W++M++GYV  G  +  L  F  M  
Sbjct: 570 EMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMIC 629

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
                D+FT TS + AC S G +  G Q+HG++   G  + +   +  S++D YVKCG L
Sbjct: 630 SQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG--HGLDVFLGSSIIDMYVKCGSL 687

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +A  +F+  + ++V+ W+S+I G A      EA+ LF  +    +  +      ++   
Sbjct: 688 NDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 747

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           +   L+E+G +      +V  G+     +   +VD+Y + G ++E  E  +   +  + +
Sbjct: 748 SHAGLLEEGCKYFRLMREV-YGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSS 806

Query: 386 -WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEESQE 439
            W   ++    H   +  + + +K+L  ++EP D   Y+   S C+     EE+ +
Sbjct: 807 VWRSFLSSCRVHKNIEMGIWVCKKLL--ELEPFDAGPYILFSSICATEHRWEEAAK 860



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 24/243 (9%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
            N+++FS+      LA SL       +L  G Q+H  ++K+G   D  + N LIDMY KC
Sbjct: 518 FNKLTFSIA---LVLASSLS------VLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC 568

Query: 61  GEMNGACAVFDKMLERN---------------VVSWTALMCGFLQNGNAKACLSLFCQMG 105
           GEM  A  +F  + + +                VSW++++ G++QNG  +  L  F  M 
Sbjct: 569 GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMI 628

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
            S V+ ++FTL++ + A      +E G Q+HG   K G   +  +G+SIIDMY KCG +N
Sbjct: 629 CSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLN 688

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A  +F+    ++++ W +MI+G  L G   + + LF  M   G  P+E +F   L AC 
Sbjct: 689 DAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACS 748

Query: 226 SLG 228
             G
Sbjct: 749 HAG 751



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++  L   +  C+   +L+ G Q+HG + K+G   D+ L + +IDMY KCG +N A  +F
Sbjct: 635 DKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIF 694

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           ++  +RNVV WT+++ G   +G  +  + LF  M +  + PNE +    + A      +E
Sbjct: 695 NQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLE 754

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINE 166
            G +   + M+  +   P   +   ++D+Y + GR+NE
Sbjct: 755 EGCKYFRL-MREVYGIRPGAEHFTCMVDLYGRAGRLNE 791


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/688 (35%), Positives = 392/688 (56%), Gaps = 23/688 (3%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C  K L+ D   ++H  +VK G   D  L   L+++YAKCG M  A  VFD++  RNVVS
Sbjct: 79  CIDKKLVSD-AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVS 137

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT LM G++ +   +  + +F +M  +   P  +TL T + AS  L S E G QIHG  +
Sbjct: 138 WTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSI 197

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K   E++  +GNS+  +YSKCG +  A + F  +  K++I+W  +I+ +   G +  GL 
Sbjct: 198 KYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQ 257

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
            F +M      P+EFT TS L  C  + S+  GTQIH   I  GF  ++   I  S++  
Sbjct: 258 FFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLP--IKNSIMYL 315

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLR 309
           Y+KCG + EA+++FD +E  S+++W+++I G+A+  + A           EA+ +F +L 
Sbjct: 316 YLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLN 375

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              ++ D F  SS++ V +    +EQG+Q+HA   K     D  V  ++V+MY KCG I+
Sbjct: 376 RSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIE 435

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A++ F EM ++ +++WT +ITGY ++G  ++A+ LF  M L  V P+ + ++ VLSACS
Sbjct: 436 RASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACS 495

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+G+V+E+ +YF  + N+ ++ P ++HY+C++D   R GRLDEA + I+ M ++P+  IW
Sbjct: 496 HAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIW 555

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             L++ CR  G LELG    E LL L   +   Y ++ N++  AG W E  R+RK+ + +
Sbjct: 556 SILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEE 615

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY----GVKY 605
            L ++   SW+ +  +I+ F     +H  + +++++L  + ++ K   G+ +     V  
Sbjct: 616 KLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAK-SFGYEWEESLEVTD 674

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
              D  EE    S+  HSEKLAI   L    LN      IRV K++ +C DCH FI+ +S
Sbjct: 675 EEEDADEEKALTSIVYHSEKLAIAFGL----LNTSNAVPIRVTKSISMCRDCHNFIRIIS 730

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDY 693
            +     ++RD+ R H+F  G CSCGD+
Sbjct: 731 LLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 23/294 (7%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C     LD G Q+H   +K+GF  +L + N ++ +Y KCG ++ A  +FD+M 
Sbjct: 274 LTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEME 333

Query: 75  ERNVVSWTALMCGFLQ-------NGNAKAC----LSLFCQMGSSSVKPNEFTLSTNIKAS 123
             ++V+W A++ G  +       +  A  C    LS+F ++  S +KP+ FT S+ +   
Sbjct: 334 TISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVC 393

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             L ++E G Q+H   +K+GF  + VVG ++++MY+KCG I  A++ F  M  ++LI+W 
Sbjct: 394 SSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWT 453

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +MI GY   G   + LLLF  M+  G  P++ TF   L AC   G V         +   
Sbjct: 454 SMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNE 513

Query: 244 GFPYSVKTVI--AGSLVDFYVKCGCLVEARRVFDLIEQKSV----ISWSSLILG 291
              Y +  V+     L+D +V+ G L EA   FD I++  +      WS LI G
Sbjct: 514 ---YKITPVMDHYACLIDMFVRLGRLDEA---FDFIKEMDLEPNEFIWSILIAG 561


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/691 (34%), Positives = 381/691 (55%), Gaps = 35/691 (5%)

Query: 31   GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            G Q+H   ++ G       NN L+ MYA+ G +N A A+F     +++VSW  ++    Q
Sbjct: 453  GKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511

Query: 91   NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPV 149
            N   +  L     M    V+P+  TL++ + A   L  +  G +IH   +++G    N  
Sbjct: 512  NDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSF 571

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            VG +++DMY  C +  +   +FD +  +++  WNA++AGY    + D+ L LF +M    
Sbjct: 572  VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES 631

Query: 210  EI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            E  P+  TF S L AC           IHG+++  GF       +  +L+D Y + G + 
Sbjct: 632  EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGF--GKDKYVQNALMDMYSRMGRVE 689

Query: 269  EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER----------------- 311
             ++ +F  + ++ ++SW+++I G        +A+ L  +++ R                 
Sbjct: 690  ISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGG 749

Query: 312  -SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
               + +   L +++   A  A + +GK+IHAYA K    +D +V +++VDMY KCG ++ 
Sbjct: 750  VPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNL 809

Query: 371  ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL------DDVEPDGVAYLAV 424
            A+ +F++MP++NV+TW V+I  YG HG  +EA+ LFR M        + + P+ V Y+A+
Sbjct: 810  ASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAI 869

Query: 425  LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK- 483
             +ACSHSG+V+E    F  +     ++PR +HY+C+VD LGR+GR+ EA  LI +MP   
Sbjct: 870  FAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNL 929

Query: 484  PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
              +  W +LL ACR+H  +E G    + L  L+ +   +YV+MSNI++ AG W++   +R
Sbjct: 930  NKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVR 989

Query: 544  KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
            K  +  G++K  G SW+E   E+H F  GD +HP ++++H+ L  + +RM++E G+V  +
Sbjct: 990  KKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKE-GYVPDI 1048

Query: 604  KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
               LH++ +E KE  L  HSE+LAI   L    LN  PG  IRV KNLRVC DCH   K 
Sbjct: 1049 SCVLHNVDDEEKETMLCGHSERLAIAFGL----LNTPPGTTIRVAKNLRVCNDCHVATKI 1104

Query: 664  LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +SKI+    ++RD  RFH F  G CSCGDYW
Sbjct: 1105 ISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 243/511 (47%), Gaps = 26/511 (5%)

Query: 31  GVQLHGALVKMGFS--FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G Q+H  + K G +    + + N L++MY KCG++  A  VFD + +R+ VSW +++   
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEWN 147
            +    +  L LF  M S +V P  FTL +   A S V   V  G Q+H   +++G +  
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLR 467

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
               N+++ MY++ GR+N+A  +F V   K L++WN +I+        ++ L+    M  
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  T  S L AC  L  +  G +IH + + +G      + +  +LVD Y  C   
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG-DLIENSFVGTALVDMYCNCKQP 586

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGV 326
            + R VFD + +++V  W++L+ GYA+ E   +A+ LF ++  E     +    +S++  
Sbjct: 587 KKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                +    + IH Y  K   G D  V N+++DMY + G ++ +  +F  M  +++V+W
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSW 706

Query: 387 TVIITGYGKHGLAKEAVGLFRKM--------------LLDD----VEPDGVAYLAVLSAC 428
             +ITG    G   +A+ L  +M                DD     +P+ V  + VL  C
Sbjct: 707 NTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGC 766

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +    + + +E  +     K +   +   S +VD   + G L+ A  + + MP++ ++  
Sbjct: 767 AALAALGKGKEIHAYAVKQK-LAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVIT 824

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           W  L+ A  +HG  E   E+  I+    G N
Sbjct: 825 WNVLIMAYGMHGKGEEALELFRIMTAGGGSN 855



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 205/430 (47%), Gaps = 10/430 (2%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+   W  L+     + + +  +S +  M ++   P+ F     +KA+  +  +  G QI
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352

Query: 136 HGMCMKSGF--EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           H    K G     +  V NS+++MY KCG +  A ++FD +P +  ++WN+MIA      
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFLITSGFPYSVKTV 252
             +  L LFR M      P  FT  S   AC  + G V  G Q+H + + +G    ++T 
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG---DLRTY 469

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +LV  Y + G + +A+ +F + + K ++SW+++I   +Q +   EA+     +    
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEA 371
           ++ DG  L+S++   +    +  G++IH YA +    ++ S V  ++VDMY  C    + 
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSH 430
             +F+ +  + V  W  ++ GY ++    +A+ LF +M+ + +  P+   + +VL AC  
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
             +  + +     +      K +    + ++D   R GR++ +K +   M  K  I  W 
Sbjct: 650 CKVFSDKEGIHGYIVKRGFGKDKYVQ-NALMDMYSRMGRVEISKTIFGRMN-KRDIVSWN 707

Query: 491 TLLSACRVHG 500
           T+++ C V G
Sbjct: 708 TMITGCIVCG 717



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 9/176 (5%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+    L  G ++H   VK   + D+ + + L+DMYAKCG +N A  VFD+M  RNV++W
Sbjct: 766 CAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITW 825

Query: 82  TALMCGFLQNGNAKACLSLFCQM---GSSS---VKPNEFTLSTNIKASGVLSSVENGMQI 135
             L+  +  +G  +  L LF  M   G S+   ++PNE T      A      V+ G+ +
Sbjct: 826 NVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHL 885

Query: 136 -HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAG 188
            H M    G E        ++D+  + GR+ EA  + + MP+    +  W++++  
Sbjct: 886 FHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGA 941



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 11/270 (4%)

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +E++S   W  L+       +  +A+  +  +       D F   +++   A    +  G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 337 KQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           KQIHA+  K      +S  V+NS+V+MY KCG +  A ++F+++P ++ V+W  +I    
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPR 453
           +    + ++ LFR ML ++V+P     ++V  ACSH  G V   ++  +    +  +  R
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDL--R 467

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
               + +V    R GR+++AK L      K  ++ W T++S+   +   E       +++
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVS-WNTVISSLSQNDRFEEALMYVYLMI 526

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLR 543
            +DG  P    + S + A     ++ ERLR
Sbjct: 527 -VDGVRPDGVTLASVLPA----CSQLERLR 551


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/681 (34%), Positives = 380/681 (55%), Gaps = 28/681 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LHG +VK G + D+ +   L+++Y +C     A  +FD M ++NVV+WTAL+ G   N  
Sbjct: 98  LHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSE 157

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L +F +M      P+ +TL   + A      ++ G Q+HG  +K G +    +GNS
Sbjct: 158 PALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNS 217

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYSDKGLLLFRKMQEHGEIP 212
           +  +Y K G +    R F   P K++ITW  MI+       Y D GL LF  M E G +P
Sbjct: 218 LCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMP 277

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +EFT TS +  CG+   +  G Q+  F    G   ++   +  S +  Y++ G   EA R
Sbjct: 278 NEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLP--VKNSTMYLYLRKGETDEAMR 335

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLRERSLQVDGFVLS 321
           +F+ ++  S+I+W+++I GYAQ  + A           +A++LFR L    L+ D F  S
Sbjct: 336 LFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFS 395

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           S++ V +    +EQG+QIHA   K     D  V++++V+MY KCG I+ AT+ F EMP +
Sbjct: 396 SILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTR 455

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
             VTWT +I+GY +HG +++A+ LF  M+L    P+ + ++++LSACS++GLVEE++ YF
Sbjct: 456 TPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYF 515

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             + N+  ++P ++HY C+VD   R GRLD+A + I+    +P+ AIW +L++ CR HG+
Sbjct: 516 DMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 575

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           +EL     + LL L       YV++ N++   G W +  R+RKLA+ + +  +  RSW+ 
Sbjct: 576 MELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIA 635

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF---------VYGVKYALHDIQE 612
           +  +++FF   D THP   +++Q+L  + ++ K  +G+         ++  K    D   
Sbjct: 636 IRDKVYFFRADDMTHPQATELYQLLENLLEKAK-AVGYEPYQNAPELLFDSKEGDDDKPA 694

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
            +    ++ HSE+LA+ L L    L   PG  +RV KN+ +C DCH  IK  S +     
Sbjct: 695 AAAGSLIKHHSERLAVALGL----LETPPGATVRVTKNITMCRDCHSSIKYFSLLANREI 750

Query: 673 VVRDATRFHRFEGGVCSCGDY 693
           VVRD+ R H+F+ G CSCGD+
Sbjct: 751 VVRDSKRLHKFKDGRCSCGDF 771



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 194/394 (49%), Gaps = 18/394 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    +D G Q+HG  +K G      + N L  +Y K G++      F    ++NV
Sbjct: 184 LSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNV 243

Query: 79  VSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           ++WT ++    ++ N     LSLF  M    V PNEFTL++ +   G    +  G Q+  
Sbjct: 244 ITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 303

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--VLAGYS 195
            C K G E N  V NS + +Y + G  +EA R+F+ M + S+ITWNAMI+GY  ++    
Sbjct: 304 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAK 363

Query: 196 D---------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           D         + L LFR +      PD FTF+S L  C ++ ++  G QIH   I +G  
Sbjct: 364 DDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCL 423

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             V  V+  +LV+ Y KCG +  A + F  +  ++ ++W+S+I GY+Q     +A++LF 
Sbjct: 424 SDV--VVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFE 481

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
            +     + +     S++   +   LVE+ ++ +    +    ++  V +   +VDM+++
Sbjct: 482 DMVLSGARPNEITFVSLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGCMVDMFVR 540

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
            G +D+A         + N   W+ ++ G   HG
Sbjct: 541 LGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHG 574



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 24/206 (11%)

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSV 354
           EAM + R         DG  + S M V      VE G     + +H +  K  +  D  V
Sbjct: 63  EAMGMLR---------DGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFV 113

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           + S+V++Y++C    +A  LF+ MP KNVVTWT +ITG+  +     A+ +F +ML    
Sbjct: 114 ATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGR 173

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR----AGRL 470
            P       +LSACS +  ++  Q+      +   +K   +  + + +SL R    +G L
Sbjct: 174 YPSHYTLGGMLSACSAARRIDLGQQ-----VHGYSIKYGADTITSMGNSLCRLYCKSGDL 228

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSAC 496
           +      +  P K ++  W T++S+C
Sbjct: 229 ESGLRAFKGTPDK-NVITWTTMISSC 253


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/679 (34%), Positives = 370/679 (54%), Gaps = 47/679 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+ + + +   Q+   ++K+G+   L++ N L+D Y K   ++ AC +F +M E   
Sbjct: 151 LSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE--- 207

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
                                            + FT +  + A+  L  +  G QIH  
Sbjct: 208 --------------------------------IDSFTFAAVLCANIGLDDIVLGQQIHSF 235

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+ F WN  V N+++D YSK   + +A ++FD MP +  +++N +I+GY   G     
Sbjct: 236 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 295

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LFR++Q       +F F + L    +      G QIH   I +     +  ++  SLV
Sbjct: 296 FDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI--LVGNSLV 353

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG   EA  +F  +  +S + W+++I  Y Q+    E ++LF ++R+ S+  D  
Sbjct: 354 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 413

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFN 376
             +S++   A  A +  GKQ+H++  K  SG  ++V   ++++D+Y KCG I +A + F 
Sbjct: 414 TFASLLRASASIASLSLGKQLHSFIIK--SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 471

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EMP +N+V+W  +I+ Y ++G A+  +  F++M+L  ++PD V++L VLSACSHSGLVEE
Sbjct: 472 EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEE 531

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              +F+ +    ++ PR EHY+ +VD L R+GR +EA+ L+  MP+ P   +W ++L+AC
Sbjct: 532 GLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 591

Query: 497 RVHGDLELGREVGEILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           R+H + EL R   + L  ++   +   YV MSNI+A AG W    ++ K  R +G+KK+ 
Sbjct: 592 RIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLP 651

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
             SWVE+  E H F   D  HP  E+I + +  + K M EELG+      ALH+  E+ K
Sbjct: 652 AYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM-EELGYKPDTSCALHNEDEKFK 710

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
            ESL+ HSE+LAI  AL+    +   G  I V KNLR C DCH  IK +SKI+     VR
Sbjct: 711 VESLKYHSERLAIAFALI----STPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVR 766

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+TRFH F  G CSCGD+W
Sbjct: 767 DSTRFHHFRDGFCSCGDFW 785



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 3/339 (0%)

Query: 4   VSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           + F+    +Q   A  L   S  L  + G Q+H   +      ++++ N L+DMYAKCG+
Sbjct: 302 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGK 361

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
              A  +F  +  R+ V WTA++  ++Q G  +  L LF +M  +SV  ++ T ++ ++A
Sbjct: 362 FEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRA 421

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S  ++S+  G Q+H   +KSGF  N   G++++D+Y+KCG I +A + F  MP +++++W
Sbjct: 422 SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSW 481

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NAMI+ Y   G ++  L  F++M   G  PD  +F   L AC   G V  G   H   +T
Sbjct: 482 NAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMT 540

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEA 301
             +    +     S+VD   + G   EA ++  ++      I WSS++      +N   A
Sbjct: 541 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELA 600

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
                QL       D     +M  ++A     E   ++H
Sbjct: 601 RRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 639



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 70/423 (16%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N V  N +I  Y K G + EA ++FD M  ++ +TW  +I GY       +   LF +MQ
Sbjct: 77  NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PD  TF + L  C         TQ+   +I  G  Y  + ++  +LVD Y K   
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG--YDSRLIVGNTLVDSYCKSNR 194

Query: 267 LVEARRVFDLIEQKSVISWSS----------LILG------------------------- 291
           L  A ++F  + +    ++++          ++LG                         
Sbjct: 195 LDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 254

Query: 292 YAQEENLAEAMELFRQLRE--------------------------RSLQVDG-----FVL 320
           Y++ +++ +A +LF ++ E                          R LQ        F  
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++M+ + ++    E G+QIHA      +  +  V NS+VDMY KCG  +EA  +F  +  
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH 374

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           ++ V WT +I+ Y + G  +E + LF KM    V  D   + ++L A +    +   ++ 
Sbjct: 375 RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQL 434

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            S +     M   +   S ++D   + G + +A    + MP + +I  W  ++SA   +G
Sbjct: 435 HSFIIKSGFMS-NVFSGSALLDVYAKCGSIKDAVQTFQEMPDR-NIVSWNAMISAYAQNG 492

Query: 501 DLE 503
           + E
Sbjct: 493 EAE 495



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +G F     + Q +Q+     K+P   +T  +N ++  Y+K G + EA +LF+ M  +  
Sbjct: 54  VGNFLKNGELSQARQLFE---KMPHK-NTVSTNMMISGYVKSGNLGEARKLFDGMVERTA 109

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL---VEESQEY 440
           VTWT++I GY +    KEA  LF +M     EPD V ++ +LS C+   +   + + Q  
Sbjct: 110 VTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQ 169

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             +L  D R+       + +VDS  ++ RLD A  L + MP   S   +  +L A     
Sbjct: 170 IIKLGYDSRLIVG----NTLVDSYCKSNRLDLACQLFKEMPEIDSFT-FAAVLCANIGLD 224

Query: 501 DLELGREVGEILLRLD 516
           D+ LG+++   +++ +
Sbjct: 225 DIVLGQQIHSFVIKTN 240


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/707 (35%), Positives = 385/707 (54%), Gaps = 38/707 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CSK +    GVQ+HG +VKMG   DL + N LI  YA CG+++    VFD+MLERNV
Sbjct: 129 LSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNV 188

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+L+ G+     AK  + LF +M    V+PN  T+   I A   L  +E G ++  +
Sbjct: 189 VSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNL 248

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             + G + N +V N+++DMY KCG +     +FD    K+L+ +N +++ YV  G + + 
Sbjct: 249 MTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEV 308

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L++  +M + G+ PD+ T  ST+ AC  LG +  G   H ++  +G        I+ +++
Sbjct: 309 LVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDN--ISNAII 366

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ---------------EENLA---- 299
           D Y+KCG    A +VFD +  K+V++W+SLI G  +               E NL     
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426

Query: 300 ------------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
                       EA++L R+++ + ++ D   +  +         ++  K I+ Y  K  
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
             +D  +  ++VDM+ +CG    A  +F  M  ++V  WT  I      G AK A+ LF 
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +ML  DV+ D   ++A+L+A SH G V++ ++ F  +     + P+I HY C+VD LGRA
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G L+EA +L++SMP+KP+  IW + L+ACR H ++E      E + +L  +    +V++S
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLS 666

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           NI+A AG WN+  R+R   + KG +KVAG S +EV   I  F  GD++H    +I  +L 
Sbjct: 667 NIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQ 726

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           E+  R+  ++G+V      L D+ E+ KE  L  HSEKLA+   L+  G     G  IRV
Sbjct: 727 EINCRI-SQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTG----KGIPIRV 781

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLR+C DCH F K +SK+      VRD  R+H F+ G CSC D+W
Sbjct: 782 VKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 260/539 (48%), Gaps = 43/539 (7%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG---EMNGACAVF--DK 72
           SL+ C   + L    QLH  ++K G  F++   N LI    + G    +N A   F  D+
Sbjct: 28  SLQTCKTLIELK---QLHCNMLKKGV-FNI---NKLIAACVQMGTHESLNYALNAFKEDE 80

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVEN 131
             + ++ +   L+ G+  +G  K  + ++  M     + P+ FT    + A   + +   
Sbjct: 81  GTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSE 140

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G+Q+HG+ +K G   +  V NS+I  Y+ CG+++   ++FD M  +++++W ++I GY +
Sbjct: 141 GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
              + + + LF +M E G  P+  T    + AC  L  +  G ++   +   G   +  T
Sbjct: 201 VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSN--T 258

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           ++  +L+D Y+KCG +   R +FD    K+++ +++++  Y Q     E + +  ++ ++
Sbjct: 259 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK 318

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLID 369
             + D   + S +   A    +  GK  HAY  +  +GL+   ++SN+I+DMY+KCG  +
Sbjct: 319 GQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFR--NGLERLDNISNAIIDMYMKCGKRE 376

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A ++F+ M  K VVTW  +I G  + G  + A+ +F +M     E + V++  ++ A  
Sbjct: 377 AACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEM----PESNLVSWNTMIGAMV 432

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
            + + EE+ +    + N      R+     I  + G  G LD AK              W
Sbjct: 433 QASMFEEAIDLLREMQNQGIKGDRVTMVG-IASACGYLGALDLAK--------------W 477

Query: 490 -QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV-MMSNIHA-DAGSWNECERLRKL 545
             T +    +H D++LG  + ++  R  GD P+N + +  N+   D  +W    R++ +
Sbjct: 478 IYTYIEKNDIHIDMQLGTALVDMFSRC-GD-PLNAMRVFENMEKRDVSAWTAAIRVKAV 534



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 53/330 (16%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++  +  ++  C++   L  G   H  + + G      ++N +IDMY KCG+   AC VF
Sbjct: 323 DKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVF 382

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS---------------------- 108
           D M  + VV+W +L+ G +++G  +  L +F +M  S+                      
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 442

Query: 109 ---------VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
                    +K +  T+     A G L +++    I+    K+    +  +G +++DM+S
Sbjct: 443 LLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFS 502

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           +CG    A R+F+ M  + +  W A I    + G +   + LF +M +     D+F F +
Sbjct: 503 RCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVA 562

Query: 220 TLKACGSLGSVGGGTQ-------IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            L A    G V  G Q       IHG         S + V  G +VD   + G L EA  
Sbjct: 563 LLTAFSHGGYVDQGRQLFWAMEKIHGV--------SPQIVHYGCMVDLLGRAGLLEEA-- 612

Query: 273 VFDLIEQKSV----ISWSSLILGYAQEENL 298
            FDL++   +    + W S +    + +N+
Sbjct: 613 -FDLMKSMPIKPNDVIWGSFLAACRKHKNV 641


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/677 (33%), Positives = 374/677 (55%), Gaps = 11/677 (1%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            L  C     L +G  LHG + K G   ++ + N L+ MYA+ G    A  VF  M  R++
Sbjct: 459  LPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDL 518

Query: 79   VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +SW ++M   +++G     + L  +M  +    N  T +T + A   L  ++    +H  
Sbjct: 519  ISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLK---IVHAF 575

Query: 139  CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +      N ++GN+++ MY K G ++EA ++  +MP + ++TWNA+I G+      +  
Sbjct: 576  VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 199  LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +  F  M+  G + +  T  + L  C S   +   G  IH  ++ +GF   + T +  SL
Sbjct: 636  IQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGF--ELDTYVQSSL 693

Query: 258  VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
            +  Y +CG L  +  +FD++  K+  +W+++    A      EA++   ++R   + +D 
Sbjct: 694  ITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQ 753

Query: 318  FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
            F  S  +    +  ++++G+Q+H++  K+   LD  V N+ +DMY KCG ID+   +   
Sbjct: 754  FSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPI 813

Query: 378  MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              +++  +W ++I+   +HG  ++A   F +ML   ++PD V ++++LSACSH GLV+E 
Sbjct: 814  PKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEG 873

Query: 438  QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
              YFS + ++  +   IEH  CI+D LGR+GRL EA+  I+ MPV P+  +W++LL+AC+
Sbjct: 874  LVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACK 933

Query: 498  VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            VHG+LELGR+  + L  L+  +   YV+ SN+ A    W + E +RK   S+ LKK    
Sbjct: 934  VHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPAC 993

Query: 558  SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
            SW+++  ++  F  GD  HP + +I+  L E+ K  +EE G +    YAL D  EE KE 
Sbjct: 994  SWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREE-GHMPDTSYALQDTDEEQKEH 1052

Query: 618  SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            +L  HSE++A+   L+    N   G  +R+FKNLRVCGDCH   K +SKI+    VVRD+
Sbjct: 1053 NLWNHSERIALAFGLI----NSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDS 1108

Query: 678  TRFHRFEGGVCSCGDYW 694
             RFH F GG CSC DYW
Sbjct: 1109 YRFHHFHGGKCSCSDYW 1125



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 254/512 (49%), Gaps = 13/512 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGA 66
           L+     +A  +R C        G Q+ G ++K G  +  + + N LI M+     +  A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VF+ M ER+ +SW +++     NG  +  L  F  M  +  K +  T+S  + A G  
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             ++ G  +HG+  KSG E N  V NS++ MY++ G   +A  +F  MPA+ LI+WN+M+
Sbjct: 466 QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMM 525

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           A +V  G     +LL  +M +  +  +  TFT+ L AC +L  +     +H F+I   F 
Sbjct: 526 ASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIH--FA 580

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                +I  +LV  Y K G + EA++V  ++ ++ V++W++LI G+A +++    ++ F 
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFN 640

Query: 307 QLRERSLQVDGFVLSSMMGV-FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            +R   L  +   + +++G   +   L++ G  IHA+       LDT V +S++ MY +C
Sbjct: 641 LMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQC 700

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ ++ +F+ +  KN  TW  I +    +G  +EA+    +M  D V+ D  ++   L
Sbjct: 701 GDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVAL 760

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVK 483
           +   +  +++E Q+  S +    ++   ++ Y  +  +D  G+ G +D+   ++  +P  
Sbjct: 761 ATIGNLTVLDEGQQLHSWII---KLGFELDEYVLNATMDMYGKCGEIDDVFRIL-PIPKI 816

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            S   W  L+SA   HG      E    +L L
Sbjct: 817 RSKRSWNILISALARHGFFRQATEAFHEMLDL 848



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 236/474 (49%), Gaps = 23/474 (4%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G  LH   VK     +    N L++MY+K G +  A  VFDKM +RN  SW  ++ GF
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFE 145
           ++ G     +  FC M  + V P+ + +++ + A   SG ++  E   QIHG  +K G  
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMT--EGARQIHGYVVKCGLM 281

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            N  VG S++  Y   G ++EA ++F+ +   ++++W +++  Y   G++ + L ++R +
Sbjct: 282 SNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL 341

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           + +G I    T  + ++ CG  G    G QI G +I SG   S  +V A SL+  +    
Sbjct: 342 RHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSV-ANSLISMFGNYD 400

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            + EA RVF+ ++++  ISW+S+I   A      E++  F  +R    + D   +S+++ 
Sbjct: 401 SVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLP 460

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
                  ++ G+ +H    K  SGL+++  V NS++ MY + G  ++A  +F+ MP +++
Sbjct: 461 ACGSAQHLKWGRGLHGLITK--SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDL 518

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           ++W  ++  + + G    A+ L  +ML      + V +   LSAC +   ++    +   
Sbjct: 519 ISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIH 578

Query: 444 LCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
                     + H   I ++L    G+ G +DEA+ + + MP +  +  W  L+
Sbjct: 579 FA--------VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPER-DVVTWNALI 623



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 214/425 (50%), Gaps = 32/425 (7%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  +H +C+K   + N    N++++MYSK G I  A  +FD M  ++  +WN MI+G+V 
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG-GGTQIHGFLITSGFPYSVK 250
            G+  K +  F  M E+G  P  +   S + AC   G +  G  QIHG+++  G   +V 
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV- 284

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +  SL+ FY   G + EA ++F+ IE+ +++SW+SL++ YA   +  E + ++R LR 
Sbjct: 285 -FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH 343

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT---SVSNSIVDMYLKCGL 367
             L   G  +++++     F     G QI      + SGLDT   SV+NS++ M+     
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQI--LGDVIKSGLDTSSVSVANSLISMFGNYDS 401

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           ++EA+ +FN M  ++ ++W  IIT    +G  +E++G F  M     + D +   A+L A
Sbjct: 402 VEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPA 461

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVK 483
           C  +  ++     + R  +    K  +E   C+ +SL     +AG  ++A+ +  +MP +
Sbjct: 462 CGSAQHLK-----WGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR 516

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILL---RLDGDNPVNYVMMSNIHADAGSWNECE 540
             I+ W +++++      +E G+    ILL    L     +NYV  +       + + C 
Sbjct: 517 DLIS-WNSMMAS-----HVEDGKYSHAILLLVEMLKTRKAMNYVTFTT------ALSACY 564

Query: 541 RLRKL 545
            L KL
Sbjct: 565 NLEKL 569



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 243/508 (47%), Gaps = 15/508 (2%)

Query: 15  LADSLRCCSKNLLLDYGV-QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           +A  +  C ++  +  G  Q+HG +VK G   ++ +   L+  Y   G ++ A  +F+++
Sbjct: 251 IASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEI 310

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
            E N+VSWT+LM  +  NG+ K  L+++  +  + +     T++T I+  G+      G 
Sbjct: 311 EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGY 370

Query: 134 QIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           QI G  +KSG + + V V NS+I M+     + EA+R+F+ M  +  I+WN++I      
Sbjct: 371 QILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHN 430

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G  ++ L  F  M+      D  T ++ L ACGS   +  G  +HG +  SG   +V   
Sbjct: 431 GRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNV--C 488

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL+  Y + G   +A  VF  +  + +ISW+S++  + ++   + A+ L  ++ +  
Sbjct: 489 VCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTR 548

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
             ++    ++ +    +   +E+ K +HA+        +  + N++V MY K GL+DEA 
Sbjct: 549 KAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQ 605

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHS 431
           ++   MP ++VVTW  +I G+         +  F  M  + +  + +  + +L  C S  
Sbjct: 606 KVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPD 665

Query: 432 GLVEESQEYFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            L++      + +      +   ++  S ++    + G L+ +  + + +  K S + W 
Sbjct: 666 YLLKHGMPIHAHIVVAGFELDTYVQ--SSLITMYAQCGDLNTSSYIFDVLANKNS-STWN 722

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGD 518
            + SA   +G    G E  + + R+  D
Sbjct: 723 AIFSANAHYGP---GEEALKFIARMRND 747


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/664 (34%), Positives = 372/664 (56%), Gaps = 10/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  L+ +G  F   L   LI   +  G++  A  VFD +    +  W A++ G+ +N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +  L ++  M  + V P+ FT    +KA   LS ++ G  +H    + GF+ +  V N
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 153 SIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +I +Y+KC R+  A  +F+   +P +++++W A+++ Y   G   + L +F  M++   
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD     S L A   L  +  G  IH  ++  G       +I  SL   Y KCG +  A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           + +FD ++  ++I W+++I GYA+     EA+++F ++  + ++ D   ++S +   A  
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +EQ + ++ Y  +     D  +S++++DM+ KCG ++ A  +F+    ++VV W+ +I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GYG HG A+EA+ L+R M    V P+ V +L +L AC+HSG+V E   +F+ L  D ++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN-LMADHKI 455

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P+ +HY+C++D LGRAG LD+A  +I+ MPV+P + +W  LLSAC+ H  +ELG    +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  +D  N  +YV +SN++A A  W+    +R   + KGL K  G SWVEV   +  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP  E+I + +  +E R+KE  GFV     +LHD+ +E  EE+L  HSE++AI  
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEG-GFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    +   G  +R+ KNLR C +CH   K +SK++    VVRD  RFH F+ GVCSC
Sbjct: 635 GLI----STPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690

Query: 691 GDYW 694
           GDYW
Sbjct: 691 GDYW 694



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 7/411 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLER 76
           L+ CS    L  G  +H  + ++GF  D+ + N LI +YAKC  +  A  VF+   + ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
            +VSWTA++  + QNG     L +F  M    VKP+   L + + A   L  ++ G  IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K G E  P +  S+  MY+KCG++  A  +FD M + +LI WNAMI+GY   GY+ 
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + + +F +M      PD  + TS + AC  +GS+     ++ ++  S   Y     I+ +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD--YRDDVFISSA 363

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D + KCG +  AR VFD    + V+ WS++I+GY       EA+ L+R +    +  +
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                 ++       +V +G       A             ++D+  + G +D+A E+  
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MPV+  VT W  +++   KH   +  +G +    L  ++P    +   LS
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLS 532



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  ++  C++   L+    ++  + +  +  D+ +++ LIDM+AKCG + GA  VFD+ L
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R+VV W+A++ G+  +G A+  +SL+  M    V PN+ T    + A      V  G  
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
              +               +ID+  + G +++A  +   MP +  +T W A+++ 
Sbjct: 446 FFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/666 (35%), Positives = 370/666 (55%), Gaps = 44/666 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF+ + E N++ W  ++ G   + +  + L ++ +M S    PN ++    +K+   
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV------------ 173
             + E G QIH   +K G   +  V  S+I MY++ G + +A ++FD             
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 174 -------------------MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                              +  + +++WNAMI GYV  G  ++ L LF++M      PDE
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITS----GFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            T  S + AC   GS+  G Q+H ++       GF  S+K  I  +L+D Y KCG +  A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLK--IVNALIDLYSKCGDVETA 254

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             +F+ +  K V+SW++LI GY       EA+ LF+++       +   L S++   A  
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314

Query: 331 ALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             ++ G+ IH Y  K   G+  +TS+  S++DMY KCG I+ A ++FN M  +++ +W  
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I G+  HG A  A  LF +M  + VEPD + ++ +LSACSHSGL++  ++ F  +  D 
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDY 434

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P++EHY C++D LG +G   EA+ +I +MP++P   IW +LL AC+ HG+LEL    
Sbjct: 435 NLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF 494

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            + L++++ +N  +YV++SNI+A AG W +  R+R +   KG+KKV G S +EVD  +H 
Sbjct: 495 AQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHE 554

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD  HP   +I+ +L EM+ ++ EE GF       L +++EE KE +LR HSEKLAI
Sbjct: 555 FIIGDKLHPRRREIYHMLEEMDVQL-EEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAI 613

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+    + +PG  + + KNLRVC +CHE  K +SKI K   V RD TRFH F  GVC
Sbjct: 614 AFGLI----STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 669

Query: 689 SCGDYW 694
           SC DYW
Sbjct: 670 SCCDYW 675



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 41/446 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK------------------- 59
           L+ C+K+   + G Q+H  ++K+G   D  ++  LI MYA+                   
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 60  --C----------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
             C          G+   A  VFD++ ER+VVSW A++ G+++NG  +  L LF +M  +
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS----GFEWNPVVGNSIIDMYSKCGR 163
           +V+P+E TL + + A     S+E G Q+H          GF  +  + N++ID+YSKCG 
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +  A  +F+ +  K +++WN +I GY       + LLLF++M   GE P++ T  S L A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  LG++  G  IH ++       + +T +  SL+D Y KCG +  A +VF+ +  +S+ 
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+++I G+A       A +LF ++R   ++ D      ++   +   L++ G+QI    
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430

Query: 344 AKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
            +    L   + +   ++D+    GL  EA E+ + MP++ + V W  ++    KHG  +
Sbjct: 431 TQ-DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLS 426
            A    +K++   +EP+      +LS
Sbjct: 490 LAESFAQKLI--KIEPENSGSYVLLS 513



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 149/301 (49%), Gaps = 11/301 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKM----GFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           L   +  C+++  ++ G Q+H  +       GFS  L + N LID+Y+KCG++  A  +F
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           + +  ++VVSW  L+ G+      K  L LF +M  S   PN+ TL + + A   L +++
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318

Query: 131 NGMQIHGMCMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
            G  IH    K   G      +  S+IDMY+KCG I  A ++F+ M  +SL +WNAMI G
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFG 378

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           + + G ++    LF +M+ +   PD+ TF   L AC   G +  G QI   + T  +  +
Sbjct: 379 FAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM-TQDYNLT 437

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILGYAQEENLAEAMELFR 306
            K    G ++D     G   EA  +     +E   VI W SL+    +  NL E  E F 
Sbjct: 438 PKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVI-WCSLLKACKKHGNL-ELAESFA 495

Query: 307 Q 307
           Q
Sbjct: 496 Q 496


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/576 (38%), Positives = 354/576 (61%), Gaps = 12/576 (2%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +KA G L    +G +IH + +K GFEW+  V  S++ MYS+ G + +A ++FD MPA+  
Sbjct: 4   VKACGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            +WNAMI+GY   G + + L +  +M+  G   D  T  S L  C  +G +  G  IH +
Sbjct: 61  GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I  G  + +   ++ +L++ Y K G L  A++VF L+  K V+SW++LI GYAQ    +
Sbjct: 121 VIKHGLEFEL--FVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLAS 177

Query: 300 EAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
           EA+E++  + E   +  +     S++  ++    ++QG +IH    K     D  V   +
Sbjct: 178 EAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCL 237

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY KCG +D+A  LF ++P KN V W  +I+ YG HG  ++A+ LFR+M  + V+PD 
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           + ++++LSACSHSGLV ++Q  F+ +  +  +KP ++HY C+VD  GRAG L+ A N I+
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
            MP++P  + W  LL+ACR+HG++ELG+   E L  +D +N   YV++SNI+A+ G W  
Sbjct: 358 KMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEG 417

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
            + +R LAR +GL+K  G S + ++ ++  FY G+ THP  E+I++ L ++  ++K  +G
Sbjct: 418 VDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIK-TIG 476

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +V    + L D++E+ KE  L  HSE+LAI   ++    +  P   IR+FKNLRVCGDCH
Sbjct: 477 YVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGII----STSPKTPIRIFKNLRVCGDCH 532

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              K +S I +   +VRD++RFH F+GG CSCGDYW
Sbjct: 533 TVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 214/404 (52%), Gaps = 11/404 (2%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           LLD G ++H  ++K+GF +D+ +   L+ MY++ G +  A  +FD M  R+  SW A++ 
Sbjct: 10  LLD-GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMIS 68

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+ QNGNA   L +  +M    VK +  T+++ +     +  + +G  IH   +K G E+
Sbjct: 69  GYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              V N++I+MY+K G +  A ++F ++  K +++WN +I GY   G + + + ++  M+
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLME 187

Query: 207 EHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           EH E IP++ T+ S L A   +G++  G +IHG +I +   YS    +   L+D Y KCG
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCL-YS-DVFVGTCLIDMYGKCG 245

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +A  +F  + +K+ + W+++I  Y    +  +A+ELFR+++   ++ D     S++ 
Sbjct: 246 KLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLS 305

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-N 382
             +   LV   +       +   G+  S+ +   +VD++ + G ++ A     +MP++ +
Sbjct: 306 ACSHSGLVSDAQWCFNMMEE-EYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPD 364

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              W  ++     HG  +  +G      L +V+ + V Y  +LS
Sbjct: 365 ASAWGALLNACRIHGNIE--LGKHASERLFEVDSENVGYYVLLS 406


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/703 (34%), Positives = 373/703 (53%), Gaps = 43/703 (6%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++H  +   G      L N L+ MYA+ G +  A  +F  +  R+  SW A++  
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             Q+G+    L +F +M    VKPN  T    I        +  G +IH   + +GF+ +
Sbjct: 183 HSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTD 241

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            VV  ++I+MY KCG  +EA  +FD M  + +++WN MI  YVL G   + L L++K+  
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDM 301

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G    + TF S L AC S+ ++  G  +H  ++  G    V   +A +LV+ Y KCG L
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV--AVATALVNMYAKCGSL 359

Query: 268 VEARRVFDLIEQKSVISWSSLILGYA---------------------------------- 293
            EAR+VF+ ++ +  ++WS+LI  YA                                  
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYV 419

Query: 294 QEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           Q      AM++FR++   + L+ D     +++   A    + + K +HA  ++     + 
Sbjct: 420 QNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNV 479

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V+N++++MY +CG ++EA  LF     K VV+WT ++  + ++G   EA+ LF++M L+
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLE 539

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            V+PD V Y ++L  C+H G +E+   YF+ +     + P  +H++ +VD LGR+GRL +
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFD 599

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
           AK L+ESMP +P    W T L+ACR+HG LELG    E +  LD  +   Y+ MSNI+A 
Sbjct: 600 AKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAA 659

Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
            G W +   +RK    +GLKK+ G S++EVD ++H F  G   HP T++I + L  +   
Sbjct: 660 HGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGL 719

Query: 593 MKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
           M+   G+V   K  LHD+ E  KE  L  HSEK+AI   LV    +   G+ IRV KNLR
Sbjct: 720 MRAA-GYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS---SRGSGEPIRVVKNLR 775

Query: 653 VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG-GVCSCGDYW 694
           VC DCH   K +++I     +VRD  RFHRF   G CSCGDYW
Sbjct: 776 VCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 259/509 (50%), Gaps = 49/509 (9%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGF 88
           G  LH  +    F  D M+ N LI MY KC  +  A +VF+ M   +RNVVSW A++  +
Sbjct: 26  GRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAY 85

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            QNG++   L L+ +M    +  +  T    +   G  SS+  G +IH     SG +   
Sbjct: 86  AQNGHSTEALVLYWRMNLQGLGTDHVTF---VSVLGACSSLAQGREIHNRVFYSGLDSFQ 142

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            + N+++ MY++ G + +A RMF  +  +   +WNA+I  +  +G     L +F++M+  
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD 202

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            + P+  T+ + +    +   +  G +IH  ++ +GF   +  V+A +L++ Y KCG   
Sbjct: 203 VK-PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDL--VVATALINMYGKCGSSH 259

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EAR VFD ++++ ++SW+ +I  Y    +  EA+EL+++L     +       S++G  +
Sbjct: 260 EAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319

Query: 329 DFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
               + QG+ +H++   +  GLD+  +V+ ++V+MY KCG ++EA ++FN M  ++ V W
Sbjct: 320 SVKALAQGRLVHSHI--LERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAW 377

Query: 387 TVII-----TGYGK-----------------------------HGLAKEAVGLFRKML-L 411
           + +I      GYGK                             +G A  A+ +FR+M   
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGA 437

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             ++PD V ++AVL AC+  G + E +   +++ ++  ++  +   + +++   R G L+
Sbjct: 438 AGLKPDAVTFIAVLEACASLGRLSEVKALHAQI-SESELESNVVVTNTLINMYARCGSLE 496

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           EA+ L  +   K ++  W  +++A   +G
Sbjct: 497 EAERLFAAAKEK-TVVSWTAMVAAFSQYG 524



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 243/451 (53%), Gaps = 15/451 (3%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           +P+  T  T + +      V  G  +H     S FE + +VGN++I MY KC  + +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 170 MFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           +F+ M    +++++WNAMIA Y   G+S + L+L+ +M   G   D  TF S L AC SL
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                G +IH  +  SG   S ++ +A +LV  Y + G + +A+R+F  ++ +   SW++
Sbjct: 124 AQ---GREIHNRVFYSGLD-SFQS-LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +IL ++Q  + + A+ +F++++   ++ +     +++  F+   ++ +G++IHA    V 
Sbjct: 179 VILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEI--VA 235

Query: 348 SGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +G DT   V+ ++++MY KCG   EA E+F++M  +++V+W V+I  Y  +G   EA+ L
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           ++K+ ++  +     ++++L ACS    + + +   S +  ++ +   +   + +V+   
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHIL-ERGLDSEVAVATALVNMYA 354

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           + G L+EA+ +  +M  + ++A W TL+ A   +G  +  R+  ++  RL   + +++  
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNA 413

Query: 526 MSNIHADAGSWNECERL-RKLARSKGLKKVA 555
           M   +   G      ++ R++  + GLK  A
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/648 (37%), Positives = 348/648 (53%), Gaps = 10/648 (1%)

Query: 48  MLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
            L N ++ MY KCG +  A  VFD+M ERN+VSW  ++  + +NG       +F  M   
Sbjct: 46  FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
             KPN  T    +++    S +E G QIH   ++SG   N  V  +I +MY KCG +  A
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ M  K+ + W  ++ GY  A      L LF KM   G   DE+ F+  LKAC  L
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
             +  G QIHG ++  G    V   +   LVDFYVKC  L  A + F+ I + + +SWS+
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVS--VGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSA 283

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           LI GY Q     EA++ F  LR RS+ ++ F  +S+    +  A    G Q HA A K  
Sbjct: 284 LITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSS 343

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
                   ++++ MY +CG +D AT +F  +   + V WT II GY   G A EA+ LFR
Sbjct: 344 LVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFR 403

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +M    V P+ V ++AVL+ACSHSGLV E ++Y   + ++  +   I+HY C+VD   RA
Sbjct: 404 RMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRA 463

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G L EA  LI SMP  P    W+ LL  C  + +LE+G    E L +LD ++   Y++M 
Sbjct: 464 GFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMF 523

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           N++A  G W E   +RK+   + L+K    SW+ V  ++H F  GD  HP TE+I+  L 
Sbjct: 524 NLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLE 583

Query: 588 EM-EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            + +  +KEE G +   +  + +   E KE+ L VHSE+LA+   L+    +      + 
Sbjct: 584 ALNDSVIKEETGLL--TEEDVSNSLPERKEQ-LLVHSERLALAFGLI----STPSSAPVV 636

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           VFKNLR C DCH+F K +S I     VVRD+ RFH F+ G CSC DYW
Sbjct: 637 VFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 194/370 (52%), Gaps = 10/370 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G Q+H   ++ G   +  +N  + +MY KCG + GA  VF+KM E+N V+WT +M G
Sbjct: 127 LEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVG 186

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + Q       L+LF +M +  V+ +E+  S  +KA   L  +  G QIHG  +K G E  
Sbjct: 187 YTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESE 246

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG  ++D Y KC  +  A + F+ +   + ++W+A+I GY   G  ++ L  F  ++ 
Sbjct: 247 VSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRT 306

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
                + FT+TS  +AC +L     G Q H   I S            +++  Y +CG L
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG--ESAMITMYSRCGRL 364

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             A RVF+ I+    ++W+++I GYA + N  EA++LFR++++  ++ +     +++   
Sbjct: 365 DYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTAC 424

Query: 328 ADFALVEQGKQIHAYAAKVPS--GLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK-N 382
           +   LV +G+Q   Y   + S  G+ T++   + +VD+Y + G + EA EL   MP   +
Sbjct: 425 SHSGLVIEGRQ---YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPD 481

Query: 383 VVTWTVIITG 392
            ++W  ++ G
Sbjct: 482 AMSWKCLLGG 491



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 164/335 (48%), Gaps = 17/335 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L++G Q+HG +VK+G   ++ +   L+D Y KC  +  A   F+ + E N 
Sbjct: 219 LKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND 278

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+AL+ G+ Q G  +  L  F  + + SV  N FT ++  +A   L+   +G Q H  
Sbjct: 279 VSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHAD 338

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS         +++I MYS+CGR++ A R+F+ +     + W A+IAGY   G + + 
Sbjct: 339 AIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEA 398

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AGS 256
           L LFR+MQ+ G  P+  TF + L AC   G V  G Q   +L +    Y V T I     
Sbjct: 399 LKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ---YLESMSSNYGVATTIDHYDC 455

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +VD Y + G L EA  +   +      +SW  L+ G     NL    E+     E   Q+
Sbjct: 456 MVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNL----EIGELAAENLFQL 511

Query: 316 D-----GFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           D     G++L  M  ++A F   ++   +    A+
Sbjct: 512 DPEDTAGYIL--MFNLYASFGKWKEAANVRKMMAE 544


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/662 (35%), Positives = 375/662 (56%), Gaps = 8/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  LV  G   +  L   L++  +  G++  A  +FD+    +V  W A++  + +N 
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + ++  M  + V P+ FT    +KA   L        IHG  +K GF  +  V N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            ++ +Y+KCG I  A  +FD +  +++++W ++I+GY   G + + L +F +M+ +G  P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D     S L+A   +  +  G  IHGF+I  G       +I  SL  FY KCG +  A+ 
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLI--SLTAFYAKCGLVTVAKS 311

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            FD ++  +VI W+++I GYA+  +  EA+ LF  +  R+++ D   + S +   A    
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E  + +  Y +K   G D  V+ S++DMY KCG ++ A  +F+    K+VV W+ +I G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG   EA+ L+  M    V P+ V ++ +L+AC+HSGLV+E  E F  +  D  + P
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVP 490

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           R EHYSC+VD LGRAG L EA   I  +P++P +++W  LLSAC+++  + LG      L
Sbjct: 491 RNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             LD  N  +YV +SN++A +  W+    +R L R KGL K  G S +E++ ++  F+ G
Sbjct: 551 FSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVG 610

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP+ ++I   L  +E+R+K E+GFV   +  LHD+  E KEE+L  HSE++A+   L
Sbjct: 611 DKSHPMAKEIFDELQRLERRLK-EVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGL 669

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    +  PG  +R+ KNLR C +CH  IK +SK+++   +VRDA RFH F+ G+CSCGD
Sbjct: 670 I----STAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGD 725

Query: 693 YW 694
           YW
Sbjct: 726 YW 727


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/677 (34%), Positives = 377/677 (55%), Gaps = 52/677 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y K   ++ A  +FD M ER+VVSW  ++    Q+G  +  L +   M S  V+
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T ++++ A   LSS+  G Q+H   +++    +P V ++++++Y+KCG   EA  +
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ +  ++ + W  +IAG++  G   + + LF +M+      D+F   + +  C S   +
Sbjct: 328 FNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H   + SG   +V  V++ SL+  Y KC  L  A  +F  + +K ++SW+S+I 
Sbjct: 388 CLGRQLHSLCLKSGQIQAV--VVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMIT 445

Query: 291 GYAQEENLAEAMELFR--------------------------------QLRERSLQVDGF 318
            ++Q  N+A+A E F                                  L E+ ++ D  
Sbjct: 446 AHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWV 505

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              ++    AD    + G QI     KV   LDTSV+N+++ MY KCG I EA ++F+ +
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFL 565

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            VK++V+W  +ITGY +HG+ K+A+ +F  +L    +PD ++Y+AVLS CSHSGLV+E +
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+KP+  +W  LLSAC++
Sbjct: 626 SYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKI 685

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+ EL     + +  LD  +  +Y++M+ I+ADAG  ++  ++RKL R KG+KK  G S
Sbjct: 686 HGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV+ ++H F   D +HP    I + L E+ +++   LG+V          + +S    
Sbjct: 746 WMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIA-RLGYV----------RTDSPRSE 794

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +  HSEKLA+       GL   P  + I + KNLR+CGDCH  IK +S +    FV+RDA
Sbjct: 795 IH-HSEKLAVAF-----GLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDA 848

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F GG CSCGDYW
Sbjct: 849 VRFHHFNGGSCSCGDYW 865



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 263/601 (43%), Gaps = 113/601 (18%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM--------- 63
           Q  AD+LR C     L     LHG LV +G +  + L N L+  Y  CG +         
Sbjct: 5   QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLT 64

Query: 64  --------------NG---------ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                         NG         A  +F +M  R+V SW  LM G+ Q+    A L  
Sbjct: 65  DIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLES 124

Query: 101 FCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FT +  +K+ G L      +Q+ GM  K G + +  V  +++DM+ 
Sbjct: 125 FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184

Query: 160 KCGRINEAAR-------------------------------MFDVMPAKSLITWNAMIAG 188
           +CG ++ A+R                               +FD MP + +++WN M++ 
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G   + L +   MQ  G   D  T+TS+L AC  L S+  G Q+H  +I +  P  
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LP-C 302

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A +LV+ Y KCGC  EA+ VF+ +  ++ ++W+ LI G+ Q     E++ELF Q+
Sbjct: 303 IDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM 362

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC--- 365
           R   + +D F L++++        +  G+Q+H+   K        VSNS++ MY KC   
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422

Query: 366 ----------------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                       G I +A E F+ M  KNV+TW  ++  Y +HG
Sbjct: 423 QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHG 482

Query: 398 LAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR-----LCNDKRMK 451
             ++ + ++  ML + DV PD V Y+ +   C+  G  +   +   R     L  D  + 
Sbjct: 483 AEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVA 542

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
                 + ++    + GR+ EA+ + + + VK  I  W  +++    HG   +G++  EI
Sbjct: 543 ------NAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG---MGKQAIEI 592

Query: 512 L 512
            
Sbjct: 593 F 593



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 238/472 (50%), Gaps = 46/472 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L +G QLH  +++     D  + + L+++YAKCG    A  VF+ + +RN
Sbjct: 276 SLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRN 335

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQI 135
            V+WT L+ GFLQ+G     + LF QM +  +  ++F L+T I  SG  S ++   G Q+
Sbjct: 336 NVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLI--SGCCSRMDLCLGRQL 393

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRI 164
           H +C+KSG     VV NS+I MY+KC                               G I
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKA 223
            +A   FD M  K++ITWNAM+  Y+  G  + GL ++  M    ++ PD  T+ +  K 
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  LG+   G QI G  +  G    + T +A +++  Y KCG ++EAR+VFD +  K ++
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLI--LDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 571

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+++I GY+Q     +A+E+F  + +R  + D     +++   +   LV++GK      
Sbjct: 572 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMM 631

Query: 344 AKV---PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLA 399
            +V     GL+    + +VD+  + G + EA +L +EMP+K     W  +++    HG  
Sbjct: 632 KRVHNISPGLEH--FSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHG-N 688

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            E   L  K + +   PD  +Y+ +    + +G  ++S +   +L  DK +K
Sbjct: 689 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ-IRKLMRDKGIK 739



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 206/457 (45%), Gaps = 75/457 (16%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +++ Y K GR+++A  +F  MPA+ + +WN +++GY  +      L  F  M 
Sbjct: 70  NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129

Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G+  P+ FTF   +K+CG+LG      Q+ G  +   F     + +A +LVD +V+CG
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLG--MVQKFGSQDDSDVAAALVDMFVRCG 187

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS------------- 312
            +  A R+F  I++ ++   +S+++GY +   +  A+ELF  + ER              
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 313 ------------------LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                             +++D    +S +   A  + +  GKQ+HA   +    +D  V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           ++++V++Y KCG   EA  +FN +  +N V WTV+I G+ +HG   E+V LF +M  + +
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367

Query: 415 EPDGVAYLAVLSACS----------------HSGLVE------------------ESQEY 440
             D  A   ++S C                  SG ++                  +S E 
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAES 427

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R  N+K     I  ++ ++ +  + G + +A+   + M  K ++  W  +L A   HG
Sbjct: 428 IFRFMNEK----DIVSWTSMITAHSQVGNIAKAREFFDGMSTK-NVITWNAMLGAYIQHG 482

Query: 501 DLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGS 535
             E G  +  ++L      P  V YV +    AD G+
Sbjct: 483 AEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGA 519



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 161/371 (43%), Gaps = 76/371 (20%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR-VF 274
            F   L++CG+ G++ G   +HG L+  G   +V   +  +L+  Y+ CG L +ARR + 
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAV--FLQNTLLHAYLSCGALPDARRLLL 63

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             I   +VI+ + ++ GY +   L++A+ELF ++  R +     ++S         A +E
Sbjct: 64  TDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLE 123

Query: 335 QGKQIH------------AYAAKVPSGL--------------------DTSVSNSIVDMY 362
               +H            AYA K    L                    D+ V+ ++VDM+
Sbjct: 124 SFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMF 183

Query: 363 LKCGL-------------------------------IDEATELFNEMPVKNVVTWTVIIT 391
           ++CG                                +D A ELF+ MP ++VV+W ++++
Sbjct: 184 VRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVS 243

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
              + G  +EA+ +   M    V  D   Y + L+AC+    +   ++  +++    R  
Sbjct: 244 ALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI---RNL 300

Query: 452 PRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELG 505
           P I+ Y  S +V+   + G   EAK +  S+  + ++A W  L++    HG     +EL 
Sbjct: 301 PCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA-WTVLIAGFLQHGCFTESVELF 359

Query: 506 REVGEILLRLD 516
            ++   L+ LD
Sbjct: 360 NQMRAELMTLD 370


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/695 (34%), Positives = 380/695 (54%), Gaps = 38/695 (5%)

Query: 31  GVQLHGALVKMGF---SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER------NVVSW 81
           G + H   +K GF     +    N L+ MYA+ G ++ A ++F            +VV+W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             ++   +Q G     + +   M S  V+P+  T ++ + A   L  +  G ++H + +K
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310

Query: 142 SG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKG 198
                 N  V ++++DMY+   ++  A R+FD++P  ++ L  WNAMI GY  AG  ++ 
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370

Query: 199 LLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           L LF +M+ E G  P E T +  L AC       G   +HG+++  G   +    +  +L
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGM--AGNRFVQNAL 428

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-------- 309
           +D Y + G +  ARR+F +I+ + V+SW++LI G   + + AEA +L  +++        
Sbjct: 429 MDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSS 488

Query: 310 --------ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
                         +   L +++   A  A   +GK+IH YA +     D +V +++VDM
Sbjct: 489 SSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDM 548

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVA 420
           Y KCG +  +  +F+ +P +NV+TW V+I  YG HGL  EAV LF +M    +  P+ V 
Sbjct: 549 YAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVT 608

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           ++A L+ACSHSGLV+   E F  +  D  +KP  + ++C+VD LGRAGRLDEA ++I SM
Sbjct: 609 FIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSM 668

Query: 481 -PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
            P +  ++ W +LL ACR+H ++ELG    E L  L+     +YV++ NI++ AG W++ 
Sbjct: 669 EPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKS 728

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
             +R   R +G+ K  G SW+E+D  IH F  G+ +HP + ++H  +  + +RM+ E G+
Sbjct: 729 VAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRRE-GY 787

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
                  LHD+ E+ K   LR HSEKLAI   L+R      PG  IRV KNLRVC DCHE
Sbjct: 788 APDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRA----PPGAAIRVAKNLRVCNDCHE 843

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SK++    V+RD  RFH F  G CSCGDYW
Sbjct: 844 AAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 30/413 (7%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGE 62
           VS  +  +    A +L  CS+  +L  G ++H  ++K    + +  + + L+DMYA   +
Sbjct: 274 VSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEK 333

Query: 63  MNGACAVFDKMLE--RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTN 119
           +  A  VFD + E  R +  W A++CG+ Q G  +  L LF +M   +   P+E T+S  
Sbjct: 334 VASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGV 393

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A            +HG  +K G   N  V N+++DMY++ G ++ A R+F ++  + +
Sbjct: 394 LPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDV 453

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQ------------EHGE----IPDEFTFTSTLKA 223
           ++WN +I G V+ G++ +   L  +MQ            E GE    +P+  T  + L  
Sbjct: 454 VSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPG 513

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C +L +   G +IHG+ +       +   +  +LVD Y KCGCL  +R VFD + +++VI
Sbjct: 514 CAALAAPARGKEIHGYAVRHALESDI--AVGSALVDMYAKCGCLAASRAVFDRLPRRNVI 571

Query: 284 SWSSLILGYAQEENLAEAMELFRQLR---ERSLQVDGFVLSSMMGVFADFALVEQGKQI- 339
           +W+ LI+ Y       EA+ LF ++    E +     F+  + +   +   LV++G ++ 
Sbjct: 572 TWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFI--AALAACSHSGLVDRGLELF 629

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVII 390
           H             +   +VD+  + G +DEA  +   M    + V  W+ ++
Sbjct: 630 HGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 220/492 (44%), Gaps = 49/492 (9%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTAL---MCGFLQNGNAKACLSLFCQ 103
           + N L+  YA+CG+++ A A+F       R+ VS+ +L   +C F Q   A   L     
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSGF-----EWNPVVGNSII 155
            G   V  + FTL + + A   L   +    G + H   +K GF     E  P   N+++
Sbjct: 162 EGRHDV--SSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPF--NALL 217

Query: 156 DMYSKCGRINEAARMFDVMPAK------SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            MY++ G +++A  +F    A        ++TWN MI+  V  G   + + +   M   G
Sbjct: 218 SMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLG 277

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD  TF S L AC  L  +  G ++H  ++      +  + +A +LVD Y     +  
Sbjct: 278 VRPDGVTFASALPACSRLEMLALGREMHAVVLKDA-DLAANSFVASALVDMYAGNEKVAS 336

Query: 270 ARRVFDLIEQKS--VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
           ARRVFD++ + S  +  W+++I GYAQ     EA+ELF ++   +        ++M GV 
Sbjct: 337 ARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSE--TTMSGVL 394

Query: 328 ADFALVE--QGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              A  E   GK+ +H Y  K     +  V N+++DMY + G +D A  +F  +  ++VV
Sbjct: 395 PACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVV 454

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVE----------------PDGVAYLAVLSAC 428
           +W  +ITG    G A EA  L  +M L                    P+ +  + +L  C
Sbjct: 455 SWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGC 514

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +        +E          ++  I   S +VD   + G L  ++ + + +P + ++  
Sbjct: 515 AALAAPARGKEIHGYAVRHA-LESDIAVGSALVDMYAKCGCLAASRAVFDRLPRR-NVIT 572

Query: 489 WQTLLSACRVHG 500
           W  L+ A  +HG
Sbjct: 573 WNVLIMAYGMHG 584



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 176/408 (43%), Gaps = 21/408 (5%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWNPVVGNSIIDMYSKCGRINEAAR 169
           + F L   IK++  L        +H   ++       +P VGN+++  Y++CG ++ A  
Sbjct: 62  DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121

Query: 170 MFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGS 226
           +F       +  +++N++I+   L    ++ L   R M   G      FT  S L AC  
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181

Query: 227 LGSVGG---GTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQK-- 280
           L    G   G + H F +  GF    +      +L+  Y + G + +A+ +F        
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241

Query: 281 ----SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
                V++W+++I    Q    AEA+E+   +    ++ DG   +S +   +   ++  G
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301

Query: 337 KQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGY 393
           +++HA   K      ++ V++++VDMY     +  A  +F+ +  P + +  W  +I GY
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361

Query: 394 GKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
            + G+ +EA+ LF +M  +    P       VL AC+ S      +     +        
Sbjct: 362 AQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGN 421

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           R    + ++D   R G +D A+ +  +M     +  W TL++ C V G
Sbjct: 422 RFVQ-NALMDMYARLGEMDVARRIF-AMIDPRDVVSWNTLITGCVVQG 467


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/669 (36%), Positives = 391/669 (58%), Gaps = 13/669 (1%)

Query: 31   GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++H  L++       +++ N L+++YAKC  ++ A ++F  M  ++ VSW +++ G  
Sbjct: 373  GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             N   +  ++ F  M  + + P++F++ + + +   L  +  G QIHG  +K G + +  
Sbjct: 433  HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD-KGLLLFRKMQEH 208
            V N+++ +Y++   + E  ++F +MP    ++WN+ I     +  S  + +  F +M + 
Sbjct: 493  VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552

Query: 209  GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            G  P+  TF + L A  SL  +  G QIH  ++      +    I  +L+ FY KC  + 
Sbjct: 553  GWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSV--ADDNAIENTLLAFYGKCEQME 610

Query: 269  EARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +   +F  + E++  +SW+++I GY     L +AM L   + ++  ++D F L++++   
Sbjct: 611  DCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSAC 670

Query: 328  ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
            A  A +E+G ++HA A +     +  V +++VDMY KCG ID A+  F  MPV+N+ +W 
Sbjct: 671  ASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWN 730

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
             +I+GY +HG   +A+ LF +M      PD V ++ VLSACSH GLV+E  E+F  +   
Sbjct: 731  SMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEV 790

Query: 448  KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-DLELG 505
              + PRIEH+SC+VD LGRAG + + +  I++MP+ P+  IW+T+L A CR +  + ELG
Sbjct: 791  YELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELG 850

Query: 506  REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
            R   ++L+ L+  N VNYV++SN+HA  G W + E  R   R+  +KK AG SWV +   
Sbjct: 851  RRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDG 910

Query: 566  IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
            +H F  GD THP  EKI+  L E+  +M+ +LG+V   KYAL+D++ E+KEE L  HSEK
Sbjct: 911  VHVFVAGDQTHPEKEKIYDKLKEIMNKMR-DLGYVPETKYALYDLELENKEELLSYHSEK 969

Query: 626  LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
            LAI   L R   +E P   IR+ KNLRVCGDCH   K +S I+    ++RD+ RFH F+G
Sbjct: 970  LAIAFVLTRQ--SELP---IRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDG 1024

Query: 686  GVCSCGDYW 694
            G+CSC DYW
Sbjct: 1025 GICSCQDYW 1033



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 232/422 (54%), Gaps = 19/422 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH  + K G + D+   N L++++ + G +  A  +FD+M ++N+VSW+ L+ G+ QNG
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL--SSVENGMQIHGMCMKSGFEWNPVV 150
                  LF  + S+ + PN + + + ++A   L  + ++ GM+IHG+  KS +  + V+
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179

Query: 151 GNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EH 208
            N ++ MYS C   I++A R+F+ +  K+  +WN++I+ Y   G +     LF  MQ E 
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239

Query: 209 GEI---PDEFTFTSTLKACGSLGSVGGG--TQIHGFLITSGFPYSVKTVIAGS-LVDFYV 262
            E+   P+E+TF S +    SL   G     Q+   +  S F   VK +  GS LV  + 
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSF---VKDLYVGSALVSGFA 296

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           + G +  A+ +F+ ++ ++ ++ + L++G A++    EA ++F+++++  ++++    + 
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAV 355

Query: 323 MMGVFADFALVEQGK----QIHAYAAK-VPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           ++  F +F+ +++GK    ++HAY  +     +   + N++V++Y KC  ID A  +F  
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP K+ V+W  II+G   +   +EAV  F  M  + + P   + ++ LS+C+  G +   
Sbjct: 416 MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475

Query: 438 QE 439
           Q+
Sbjct: 476 QQ 477



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 214/437 (48%), Gaps = 20/437 (4%)

Query: 4   VSFSLVSERQRLADSLRCCSK--NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC- 60
           +S  L+     +  +LR C +    +L  G+++HG + K  ++ D++L+N L+ MY+ C 
Sbjct: 132 ISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCS 191

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV----KPNEFTL 116
             ++ A  VF+++  +   SW +++  + + G+A +   LF  M   +     +PNE+T 
Sbjct: 192 ASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTF 251

Query: 117 STNIKASGVLSSVENGM----QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            + +  +  L  V+ G+    Q+     KS F  +  VG++++  +++ G I+ A  +F+
Sbjct: 252 CSLVTVACSL--VDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFE 309

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG- 231
            M  ++ +T N ++ G       ++   +F++M++  EI +  ++   L A     ++  
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI-NASSYAVLLSAFTEFSNLKE 368

Query: 232 ---GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
               G ++H +LI +     V  +I  +LV+ Y KC  +  AR +F L+  K  +SW+S+
Sbjct: 369 GKRKGQEVHAYLIRNAL-VDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSI 427

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I G    E   EA+  F  +R   +    F + S +   A    +  G+QIH    K   
Sbjct: 428 ISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGL 487

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG-KHGLAKEAVGLFR 407
            LD SVSN+++ +Y +   ++E  ++F  MP  + V+W   I           +A+  F 
Sbjct: 488 DLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFL 547

Query: 408 KMLLDDVEPDGVAYLAV 424
           +M+    +P+ V ++ +
Sbjct: 548 EMMQAGWKPNRVTFINI 564



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 213/444 (47%), Gaps = 21/444 (4%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V  +  +  +L  C+    +  G Q+HG  +K G   D+ ++N L+ +YA+   M    
Sbjct: 452 MVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQ 511

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
            VF  M E + VSW + + G L    A     +  F +M  +  KPN  T    + A   
Sbjct: 512 KVFFLMPEYDQVSWNSFI-GALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSS 570

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNA 184
           LS +E G QIH + +K     +  + N+++  Y KC ++ +   +F  M   +  ++WNA
Sbjct: 571 LSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNA 630

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI+GY+  G   K + L   M + G+  D+FT  + L AC S+ ++  G ++H   I + 
Sbjct: 631 MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               V  V+  +LVD Y KCG +  A R F+L+  +++ SW+S+I GYA+  +  +A++L
Sbjct: 691 LEAEV--VVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKL 748

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQG-------KQIHAYAAKVPSGLDTSVSNS 357
           F Q+++     D      ++   +   LV++G        +++  A ++         + 
Sbjct: 749 FTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEH------FSC 802

Query: 358 IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +VD+  + G + +  E    MP+  N + W  I+    +       +G     +L ++EP
Sbjct: 803 MVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEP 862

Query: 417 -DGVAYLAVLSACSHSGLVEESQE 439
            + V Y+ + +  +  G  E+ +E
Sbjct: 863 LNAVNYVLLSNMHAAGGKWEDVEE 886



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 201/382 (52%), Gaps = 21/382 (5%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +VE+  Q+H    K+G   +    N++++++ + G +  A ++FD MP K+L++W+ +++
Sbjct: 54  TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQIHGFLITSGF 245
           GY   G  D+  +LFR +   G +P+ +   S L+AC  LG   +  G +IHG +  S  
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKS-- 171

Query: 246 PYSVKTVIAGSLVDFYVKCGCLV-EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           PY+   V++  L+  Y  C   + +ARRVF+ I+ K+  SW+S+I  Y +  +   A +L
Sbjct: 172 PYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKL 231

Query: 305 F----RQLRERSLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSN 356
           F    R+  E + + + +   S++ V    +LV+ G    +Q+ A   K     D  V +
Sbjct: 232 FSSMQREATELNCRPNEYTFCSLVTVAC--SLVDCGLTLLEQMLARIEKSSFVKDLYVGS 289

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           ++V  + + GLID A  +F +M  +N VT   ++ G  +    +EA  +F++M  D VE 
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEI 348

Query: 417 DGVAYLAVLSACSHSGLVEE----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
           +  +Y  +LSA +    ++E     QE  + L  +  +   I   + +V+   +   +D 
Sbjct: 349 NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDN 408

Query: 473 AKNLIESMPVKPSIAIWQTLLS 494
           A+++ + MP K +++ W +++S
Sbjct: 409 ARSIFQLMPSKDTVS-WNSIIS 429



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 23/187 (12%)

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           + D   VE   Q+H    K     D    N++V+++++ G +  A +LF+EMP KN+V+W
Sbjct: 49  YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSW 108

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH------------SGLV 434
           + +++GY ++G+  EA  LFR ++   + P+  A  + L AC               GL+
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +S  Y S +     +     H S           +D+A+ + E + +K S A W +++S
Sbjct: 169 SKS-PYASDMVLSNVLMSMYSHCS---------ASIDDARRVFEEIKMKTS-ASWNSIIS 217

Query: 495 ACRVHGD 501
                GD
Sbjct: 218 VYCRRGD 224


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/674 (35%), Positives = 376/674 (55%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +V+ G+  D+ + N LI MY KCG++  A  +FD+M  R++
Sbjct: 203 LRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G+ +NG     L LF  M   SV P+  TL++ I A  +L     G  IH  
Sbjct: 263 ISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +GF  +  V NS+  MY   G   EA ++F  M  K +++W  MI+GY      +K 
Sbjct: 323 VITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKA 382

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  +R M +    PDE T  + L AC +LG +  G ++H   I +     V  ++A +L+
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV--IVANNLI 440

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KC C+ +A  +F  I +K+VISW+S+I G        EA+  FRQ++  +LQ +  
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK-MTLQPNAI 499

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L++ +   A    +  GK+IHA+  +   GLD  + N+++DMY++CG ++ A   FN  
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQ 559

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V +W +++TGY + G     V LF +M+   V PD + ++++L  C  S +V +  
Sbjct: 560 K-KDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGL 618

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YFS++  +  + P ++HY+C+VD LGRAG L EA   I+ MPV P  A+W  LL+ACR+
Sbjct: 619 MYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H +++LG    + +  LD  +   Y+++ N++AD G W E  ++R++ +  GL   AG S
Sbjct: 678 HHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV  ++H F   D  HP T++I+ VL    ++M  E+G     + +  D  E S++E 
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKM-SEVGLTTSSESSSMDETEISRDEI 796

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+ AI   L+    N  PG  I V KNL +C  CH+ +K +SK ++    VRD+ 
Sbjct: 797 FCGHSERKAIAFGLI----NSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSE 852

Query: 679 RFHRFEGGVCSCGD 692
            FH F+ G CSCGD
Sbjct: 853 HFHHFKDGECSCGD 866



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 251/479 (52%), Gaps = 11/479 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C      + G +++   +    S  + L N  + M+ + G +  A  VF KM ERN+
Sbjct: 101 VRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNL 160

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  L+ G+ + G     + L+ +M     VKP+ +T    ++  G +  +  G ++H 
Sbjct: 161 FSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHV 220

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G+E +  V N++I MY KCG +  A  +FD MP + +I+WNAMI+GY   G   +
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHE 280

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GL LF  M+     PD  T TS + AC  LG    G  IH ++IT+GF  +V   +  SL
Sbjct: 281 GLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSL 338

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
              Y+  G   EA ++F  ++ K ++SW+++I GY       +A++ +R + + S++ D 
Sbjct: 339 TQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDE 398

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             +++++   A    ++ G ++H  A K        V+N++++MY KC  ID+A ++F+ 
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +P KNV++WT II G   +    EA+  FR+M +  ++P+ +   A L+AC+  G +   
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM-TLQPNAITLTAALAACARIGALMCG 517

Query: 438 QEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E  + +    R    ++ +  + ++D   R GR++ A N   S   K  ++ W  LL+
Sbjct: 518 KEIHAHVL---RTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQ--KKDVSSWNILLT 571



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 214/414 (51%), Gaps = 5/414 (1%)

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G   NG  +  + L   M    V  +E      ++      + E G +++ + + S    
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  +GN+ + M+ + G + +A  +F  M  ++L +WN ++ GY   GY D+ + L+ +M 
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187

Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G + PD +TF   L+ CG +  +  G ++H  ++  G+   +  V   +L+  YVKCG
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVV--NALITMYVKCG 245

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +  AR +FD + ++ +ISW+++I GY +     E ++LF  +R  S+  D   L+S++ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                     G+ IHAY       +D SV NS+  MYL  G   EA +LF+ M  K++V+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +I+GY  + L ++A+  +R M  D V+PD +   AVLSAC+  G ++   E   +L 
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLA 424

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
              R+   +   + +++   +   +D+A ++  ++P K  I+ W ++++  R++
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 54/383 (14%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    LD GV+LH   +K      +++ N+LI+MY+KC  ++ A  +F  + 
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NV+SWT+++ G   N      L  F QM   +++PN  TL+  + A   + ++  G +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKE 519

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +++G   +  + N+++DMY +CGR+N A   F+    K + +WN ++ GY   G 
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERGQ 578

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS---------------------------- 226
               + LF +M +    PDE TF S L  CG                             
Sbjct: 579 GSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYAC 638

Query: 227 ----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD-----FYVKCGCLVEARRVFDLI 277
               LG  G   + H F+     P +    + G+L++       +  G L  A+R+F+L 
Sbjct: 639 VVDLLGRAGELQEAHKFI--QKMPVTPDPAVWGALLNACRIHHNIDLGEL-SAQRIFEL- 694

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           ++ SV  +  L   YA      E  ++ R ++E  L VD           A  + VE   
Sbjct: 695 DKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD-----------AGCSWVEVKG 743

Query: 338 QIHAYAAKVPSGLDTSVSNSIVD 360
           ++HA+ +       T   N+++D
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLD 766


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/685 (33%), Positives = 387/685 (56%), Gaps = 20/685 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K   L+ G +LH  L+  GF  D+ L   L+ MYAKCG ++ A  VF+ M  +++ +W
Sbjct: 20  CTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAW 79

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ++++  + + G  +  + L+ +M +  V+PN  T +  +     ++ + +G  IH   + 
Sbjct: 80  SSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILA 139

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S    + V+ +S+++MY KC  + EA ++F+ M A+++ ++ AMI+ YV AG   + L L
Sbjct: 140 SKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALEL 199

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F +M +   I P+ +TF + L A   LG++  G ++H  L + GF  +V  V+  +LV  
Sbjct: 200 FSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV--VVQNALVTM 257

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG  VEAR+VFD +  ++VISW+S+I  YAQ  N  EA+ LF+++    ++  G   
Sbjct: 258 YGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSF 314

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           SS +   A    +++G++IH    +        +  S++ MY +CG +D+A  +FN M  
Sbjct: 315 SSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNRMKT 373

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           ++  +   +I  + +HG  K+A+ ++R+M  + +  DG+ +++VL ACSH+ LV + +++
Sbjct: 374 RDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDF 433

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  L  D  + P +EHY C+VD LGR+GRL +A+ L+E+MP +     W TLLS C+ HG
Sbjct: 434 FQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHG 493

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           DL  G      +  L     + YV +SN++A A  +++  R+RK    +G+      S++
Sbjct: 494 DLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVAVSYI 553

Query: 561 EVDKEIHFFY-GGDDTHP------LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ-- 611
           E+D E+H F  GG D           E++  +L+E+ + MK+  G+V   +    + Q  
Sbjct: 554 EIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQA-GYVPDTREVYLEQQGG 612

Query: 612 --EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
             EE K+ SL  HSE+LAI   L+    +    + +RV  + RVC DCH  IK LS I++
Sbjct: 613 TSEEEKQRSLCFHSERLAIAYGLI-AAKDPDDSRPLRVVNSHRVCSDCHSAIKLLSDIIE 671

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
               VRD  RFH FE G CSCGD+W
Sbjct: 672 KTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 229/400 (57%), Gaps = 13/400 (3%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M    +  ++F +++ + A   L ++E G ++H   + +GF  +  +  +++ MY+KCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +++A R+F+ M  K L  W+++I+ Y  AG  +  ++L+R+M   G  P+  TF   L  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C S+  +  G  IH  ++ S  P     V+  SL++ Y+KC  +VEAR+VF+ ++ ++V 
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQD--DVLQDSLLNMYLKCDEMVEARKVFEGMKARNVR 178

Query: 284 SWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           S++++I  Y Q    AEA+ELF R  +  +++ + +  ++++G       +E+G+++H +
Sbjct: 179 SYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRH 238

Query: 343 AAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
            A    G DT+  V N++V MY KCG   EA ++F+ M  +NV++WT +I  Y +HG  +
Sbjct: 239 LAS--RGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 296

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ LF++M   DVEP GV++ + L+AC+  G ++E +E   R+       P++E  + +
Sbjct: 297 EALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSL 351

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +    R G LD+A+ +   M  + + +    +++A   HG
Sbjct: 352 LSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHG 390


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/644 (35%), Positives = 359/644 (55%), Gaps = 41/644 (6%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++ +YAK G +     +FD M  R+ VS+  ++ GF  NG     L +F +M    +K
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P E+T  + + A   L  +  G QIHG  +      N  V N++ D+Y++CG I++A R+
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD M  ++++TWN MI+GY+     +K + LF +MQ     PD+ T +S L A       
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------- 265

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
                                         Y++ G + EAR+VF  I +K  + W+ +I+
Sbjct: 266 ------------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIV 295

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           G AQ     +A+ LF ++   + + DG+ +SS++   A  A +  G+ +H  A  +    
Sbjct: 296 GCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVND 355

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  VS+++VDMY KCG+  +A  +F+ M  +NVV+W  +I GY  +G   EA+ L+  ML
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
            ++++PD V ++ VLSAC H+GLVEE +EYF  + +   ++P  +HY+C+V+  GR+G +
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHM 475

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
           D+A +LI SM  +P+  IW T+LS C + GD++ G      L+ L+  N V Y+M+SN++
Sbjct: 476 DKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMY 535

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           A  G W +   +R L +SK +KK +  SW+E+D E+H F   D THP  + IH  L  + 
Sbjct: 536 AARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLI 595

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
           +++ +E GF       LHD  E+ K ES+  HSEKLA+   L++      P   IR+ KN
Sbjct: 596 RKL-QEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTP---IRIIKN 651

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +R C DCH F+K +S I +   ++RD+ RFH F  G CSC DYW
Sbjct: 652 IRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 46/387 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++ L L  G Q+HG ++      ++ + N L D+YA+CGE++ A  +FD+M+ RNV
Sbjct: 162 LNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNV 221

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W  ++ G+L+N   + C+ LF +M  S++KP++ T S                     
Sbjct: 222 VTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTAS--------------------- 260

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                         S++  Y + G I+EA ++F  +  K  + W  MI G    G  +  
Sbjct: 261 --------------SVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDA 306

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF +M      PD +T +S + +C  L S+  G  +HG     G    +  +++ +LV
Sbjct: 307 LLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL--LVSSALV 364

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG   +A  +F  ++ ++V+SW+S+I GYA      EA+ L+  + E +L+ D  
Sbjct: 365 DMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSV 424

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++       LVE+GK+     +    GL+ +  +   +V+++ + G +D+A +L +
Sbjct: 425 TFVGVLSACVHAGLVEEGKEYFCSMSD-QHGLEPTPDHYACMVNLFGRSGHMDKAVDLIS 483

Query: 377 EMPVK-NVVTWTVIIT-----GYGKHG 397
            M  + N + WT +++     G  KHG
Sbjct: 484 SMSQEPNSLIWTTVLSVCVMKGDIKHG 510


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/681 (34%), Positives = 379/681 (55%), Gaps = 52/681 (7%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
           ++  N ++  YAK   ++ A  +F  M ER+VVSW  ++    ++G  +  L +   M  
Sbjct: 225 IICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHG 284

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
             V+P+  T ++++ A   LSS+E G Q+H   +++    +P V ++++++Y+KCG   E
Sbjct: 285 KGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKE 344

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A R+F  +  ++ ++W  +I G++  G   + + LF +M+      D+F   + +  C +
Sbjct: 345 AKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCN 404

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
              +  G+Q+H   + SG   +V  V++ SL+  Y KCG L  A  +F+ + ++ ++SW+
Sbjct: 405 TMDICLGSQLHSLCLKSGHTRAV--VVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWT 462

Query: 287 SLILGYAQEENLAEAMELFRQLRERSL---------------QVDGFVLSSMM------- 324
            +I  Y+Q  N+A+A E F  +  R++               + DG  + S M       
Sbjct: 463 GMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVI 522

Query: 325 -------GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                   +F   AD    + G QI  +  KV   LDTSV N+++ MY KCG I EA + 
Sbjct: 523 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKA 582

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+ +  K++V+W  +ITGY +HG+ K+A+ +F  +L    +PD ++Y+AVLS CSHSGLV
Sbjct: 583 FDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLV 642

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE + YF  +  D  + P +EH+SC+VD LGRAG L EAKNLI+ MP+KP+  +W  LLS
Sbjct: 643 EEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLS 702

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           AC+ HG+ +L     + L  LD      Y++++ ++ADAG  ++  ++RKL R KG+KK 
Sbjct: 703 ACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKS 762

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+EV+  +H F   D +HP    I + L E+ +++   LG+V          + ES
Sbjct: 763 PGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIA-HLGYV----------RTES 811

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
               +  HSEKLA+       G+   P  + I + KNLR+C DCH  IK +S +    FV
Sbjct: 812 PRSEIH-HSEKLAVAF-----GIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFV 865

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           +RD  RFH F+GG CSC DYW
Sbjct: 866 IRDGVRFHHFKGGSCSCMDYW 886



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 265/602 (44%), Gaps = 115/602 (19%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---------- 62
           Q LAD+LR C     L     LH  L+ +G +  + L N L+  Y  CG           
Sbjct: 26  QALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRD 85

Query: 63  -------------MNG---------ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                        MNG         A  +F +M  R+V SW  +M G+ Q+G     L +
Sbjct: 86  EITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDI 145

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  +    PN FT    +K+ G L   E  +Q+ G+  K   + +P V  +++DM  
Sbjct: 146 FVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLV 205

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE------------ 207
           +CG ++ A++ F  +   ++I  N+M+ GY  +   D  L +F+ M E            
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265

Query: 208 -----------------HGE--IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
                            HG+   PD  T+TS+L AC  L S+  G Q+H  +I +  P+ 
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN-LPH- 323

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A ++V+ Y KCGC  EA+RVF  +  ++ +SW+ LI G+ Q    +E++ELF Q+
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM 383

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC--- 365
           R   + VD F L++++    +   +  G Q+H+   K        VSNS++ MY KC   
Sbjct: 384 RAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNL 443

Query: 366 ----------------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                       G I +A E F++M  +NV+TW  ++  Y +HG
Sbjct: 444 QNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHG 503

Query: 398 LAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR------LCNDKRM 450
             ++ + ++  ML + DV PD V Y+ +   C+  G  +   +          + +   +
Sbjct: 504 AEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV 563

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
              I  YS       + GR+ EA+   + +  K  ++ W  +++    HG   +G++  E
Sbjct: 564 NAVITMYS-------KCGRISEARKAFDFLSRKDLVS-WNAMITGYSQHG---MGKQAIE 612

Query: 511 IL 512
           I 
Sbjct: 613 IF 614



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 227/470 (48%), Gaps = 42/470 (8%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L++G QLH  +++     D  + + ++++YAKCG    A  VF  + +RN
Sbjct: 297 SLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRN 356

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            VSWT L+ GFLQ G     + LF QM +  +  ++F L+T I        +  G Q+H 
Sbjct: 357 SVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHS 416

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRINE 166
           +C+KSG     VV NS+I MY+KC                               G I +
Sbjct: 417 LCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAK 476

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACG 225
           A   FD M  +++ITWNAM+  Y+  G  + GL ++  M  E   IPD  T+ +  + C 
Sbjct: 477 AREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCA 536

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            +G+   G QI G  +  G    + T +  +++  Y KCG + EAR+ FD + +K ++SW
Sbjct: 537 DIGANKLGDQIIGHTVKVGLI--LDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAY 342
           +++I GY+Q     +A+E+F  +  +  + D     +++   +   LVE+GK    +   
Sbjct: 595 NAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKR 654

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLAKE 401
              +  GL+    + +VD+  + G + EA  L +EMP+K     W  +++    HG   +
Sbjct: 655 DHNISPGLEH--FSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG-NND 711

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
              L  K L D   P    Y+ +    + +G  ++S +   +L  DK +K
Sbjct: 712 LAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQ-VRKLMRDKGIK 760


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/677 (33%), Positives = 378/677 (55%), Gaps = 12/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++   L  G ++H  + ++G   D+ ++N L+ MY KCG +  A  VF+    +NV
Sbjct: 41  IQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV 100

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHG 137
            SWT L+    Q+G ++  L+LF +M    ++P+  + +  I A S     +  G  +H 
Sbjct: 101 FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHA 160

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           +  + GF+   V   S++ MYSKCG + E+ + F+ M   + ++WNAMIA +       +
Sbjct: 161 LLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLE 220

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L   +KM   G      T+ + + A      +     IH  ++ +GF   V  VI    
Sbjct: 221 ALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVI---- 276

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y KCGCL +A  +F  + Q  VI+W+++I  Y+Q  + +EA+  +  ++E  +  D 
Sbjct: 277 LNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           +   S++   A    +E GKQ+H         + T ++NS+V+MY KCG++D A  +F++
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSIFDK 395

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              K  VTW  +I  Y +H   ++A  LF  M LD  EP  + +++VLSAC+++GL EE+
Sbjct: 396 T-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEA 454

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             YF  +  D  ++P   HY C+V+SLG+AGRL +A+ LI+ MP +P +  W + L+ CR
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCR 514

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            HGD++ G+   +  +R+D +    YV ++ IHADAG + E  R+RKL   +G++K AGR
Sbjct: 515 SHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGR 574

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +++   ++ F  GD ++P +++I   L  ++K MK   G+   + +  HD++   KE 
Sbjct: 575 SIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRA-GYDPDMTHVAHDVEAGQKEP 633

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   ++    +   G  +R+ KNLRVCGDCH   K  SKI +   +VRD+
Sbjct: 634 LLFAHSERLAIAFGII----STSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDS 689

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC D+W
Sbjct: 690 NRFHHFKNGSCSCKDFW 706


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/698 (34%), Positives = 377/698 (54%), Gaps = 44/698 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH   ++   S      + +I +Y     ++ A  +F  +    V++W +++  F    
Sbjct: 26  QLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L+ F +M +S   P+     + +K+  ++  +  G  +HG  ++ G + +   GN
Sbjct: 85  LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 153 SIIDMYSK---------CGR---------------------------INEAARMFDVMPA 176
           ++++MY+K          G                            I+   R+F+VMP 
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           K ++++N +IAGY  +G  +  L + R+M      PD FT +S L        V  G +I
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG++I  G    V   I  SLVD Y K   + ++ RVF  +  +  ISW+SL+ GY Q  
Sbjct: 265 HGYVIRKGIDSDV--YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              EA+ LFRQ+    ++      SS++   A  A +  GKQ+H Y  +   G +  +++
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           ++VDMY KCG I  A ++F+ M V + V+WT II G+  HG   EAV LF +M    V+P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + VA++AVL+ACSH GLV+E+  YF+ +     +   +EHY+ + D LGRAG+L+EA N 
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I  M V+P+ ++W TLLS+C VH +LEL  +V E +  +D +N   YV+M N++A  G W
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            E  +LR   R KGL+K    SW+E+  + H F  GD +HP  +KI++ L  + ++M++E
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
            G+V      LHD+ EE K E L  HSE+LA+   ++    N +PG  IRV KN+R+C D
Sbjct: 623 -GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII----NTEPGTTIRVTKNIRICTD 677

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH  IK +SKI +   +VRD +RFH F  G CSCGDYW
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 234/457 (51%), Gaps = 43/457 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA---VFDKMLE 75
           L+ C+  + L +G  +HG +V++G   DL   N L++MYAK   M    +   VFD+M +
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ 171

Query: 76  R---------------------------------NVVSWTALMCGFLQNGNAKACLSLFC 102
           R                                 +VVS+  ++ G+ Q+G  +  L +  
Sbjct: 172 RTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVR 231

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +MG++ +KP+ FTLS+ +        V  G +IHG  ++ G + +  +G+S++DMY+K  
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           RI ++ R+F  +  +  I+WN+++AGYV  G  ++ L LFR+M      P    F+S + 
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           AC  L ++  G Q+HG+++  GF  ++   IA +LVD Y KCG +  AR++FD +     
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNI--FIASALVDMYSKCGNIKAARKIFDRMNVLDE 409

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +SW+++I+G+A   +  EA+ LF +++ + ++ +     +++   +   LV++       
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469

Query: 343 AAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLA 399
             KV  GL+  + +  ++ D+  + G ++EA    ++M V+     W+ +++    H   
Sbjct: 470 MTKV-YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           + A  +  K+   D E  G AY+ + +  + +G  +E
Sbjct: 529 ELAEKVAEKIFTVDSENMG-AYVLMCNMYASNGRWKE 564



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 199/421 (47%), Gaps = 41/421 (9%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           + T IK    + S     Q+H   +++    +    + +I +Y+    ++EA  +F  + 
Sbjct: 8   IKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLK 66

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           +  ++ W ++I  +       K L  F +M+  G  PD   F S LK+C  +  +  G  
Sbjct: 67  SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKC------------------------------- 264
           +HGF++  G    + T    +L++ Y K                                
Sbjct: 127 VHGFIVRLGMDCDLYT--GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184

Query: 265 GCLV-----EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            C++       RRVF+++ +K V+S++++I GYAQ     +A+ + R++    L+ D F 
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           LSS++ +F+++  V +GK+IH Y  +     D  + +S+VDMY K   I+++  +F+ + 
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++ ++W  ++ GY ++G   EA+ LFR+M+   V+P  VA+ +V+ AC+H   +   ++
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
               +         I   S +VD   + G +  A+ + + M V   ++ W  ++    +H
Sbjct: 365 LHGYVLRGG-FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALH 422

Query: 500 G 500
           G
Sbjct: 423 G 423


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/724 (33%), Positives = 393/724 (54%), Gaps = 50/724 (6%)

Query: 5   SFSLVS---ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF--SFDLMLNNDLIDMYAK 59
           SF+LVS       LA+ LR          G + H   +K GF    +    N L+ MYA+
Sbjct: 162 SFTLVSVLLACSHLAEDLR---------LGREAHAFALKNGFLDGDERFAFNALLSMYAR 212

Query: 60  CGEMNGACAVFDKMLERN-----VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEF 114
            G ++ A  +F  +   +     VV+W  ++   +Q+G     + +   M +  V+P+  
Sbjct: 213 LGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGI 272

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMK-SGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
           T ++ + A   L  +  G ++H   +K S    N  V ++++DMY+   R+  A R+FD+
Sbjct: 273 TFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDM 332

Query: 174 MPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSV 230
           +P   + L  WNAM+ GY  AG  ++ L LF +M+ E G +P E T    L AC    + 
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF 392

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
            G   +HG+++  G   +    +  +L+D Y + G +  AR +F  IE + V+SW++LI 
Sbjct: 393 AGKEAVHGYVLKRGM--ADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDG------------------FVLSSMMGVFADFAL 332
           G   + ++ +A +L R+++++    D                     L +++   A  A 
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
             +GK+IH YA +     D +V +++VDMY KCG +  +  +F+ +P +NV+TW V+I  
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA 570

Query: 393 YGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           YG HGL  EA+ LF +M++ ++ +P+ V ++A L+ACSHSG+V+   E F  +  +  ++
Sbjct: 571 YGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQ 630

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESM-PVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           P  + ++C VD LGRAGRLDEA ++I SM P +  ++ W + L ACR+H ++ LG    E
Sbjct: 631 PTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAE 690

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L +L+ D   +YV++ NI++ AG W +   +R   R +G+ K  G SW+E+D  IH F 
Sbjct: 691 RLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFM 750

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            G+  HP +  +H  +  + +RM+ + G+       LHDI+E  K   LR HSEKLAI  
Sbjct: 751 AGESAHPESTLVHAHMDALWERMRNQ-GYTPDTSSVLHDIEESEKAAILRYHSEKLAIAF 809

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+R      PG  IRV KNLRVC DCHE  K +S+++    V+RD  RFH F  G CSC
Sbjct: 810 GLLR----TPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSC 865

Query: 691 GDYW 694
           GDYW
Sbjct: 866 GDYW 869



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 235/521 (45%), Gaps = 51/521 (9%)

Query: 33  QLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            +HGA ++      F   + N L+  YA+CG++  A A+F+ M  R+ V++ +L+     
Sbjct: 80  SIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCL 139

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTL-STNIKASGVLSSVENGMQIHGMCMKSGF--EWN 147
                  L     M       + FTL S  +  S +   +  G + H   +K+GF     
Sbjct: 140 FRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDE 199

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVM-----PAKSLITWNAMIAGYVLAGYSDKGLLLF 202
               N+++ MY++ G +++A  +F  +     P   ++TWN M++  V +G   + + + 
Sbjct: 200 RFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVI 259

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
             M   G  PD  TF S L AC  L  +  G ++H +++      +  + +A +LVD Y 
Sbjct: 260 YDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDS-DLAANSFVASALVDMYA 318

Query: 263 KCGCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
               +  ARRVFD++    + +  W++++ GYAQ     EA+ELF ++   +    G V 
Sbjct: 319 SHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEA----GVVP 374

Query: 321 S--SMMGVFADFALVEQ--GKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           S  ++ GV    A  E   GK+ +H Y  K     +  V N+++D+Y + G ++ A  +F
Sbjct: 375 SETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIF 434

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL------------------DDVEPD 417
             +  ++VV+W  +ITG    G   +A  L R+M                    + V P+
Sbjct: 435 AAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPN 494

Query: 418 GVAYLAVLSACSHSGLVEESQE---YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            V  + +L  C+      + +E   Y  R   D      I   S +VD   + G L  ++
Sbjct: 495 NVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDS----DIAVGSALVDMYAKCGCLALSR 550

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            + + +P K ++  W  L+ A  +HG   LG E   +  R+
Sbjct: 551 AVFDRLP-KRNVITWNVLIMAYGMHG---LGDEAIALFDRM 587



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 187/404 (46%), Gaps = 14/404 (3%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWNPVVGNSIIDMYSKCGRINEAAR 169
           + F L    K++  L S+     IHG  ++      + P V N+++  Y++CG +  A  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG- 228
           +F+ MP++  +T+N++IA   L       L   R M   G     FT  S L AC  L  
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-----VI 283
            +  G + H F + +GF    +     +L+  Y + G + +A+ +F  ++        V+
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           +W++++    Q     EA+E+   +  R ++ DG   +S +   +   ++  G+++HAY 
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 344 AKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMP--VKNVVTWTVIITGYGKHGLAK 400
            K      ++ V++++VDMY     +  A  +F+ +P   + +  W  ++ GY + G+ +
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 401 EAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           EA+ LF +M  +  V P       VL AC+ S      +E        + M       + 
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETF-AGKEAVHGYVLKRGMADNPFVQNA 416

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           ++D   R G ++ A+ +  ++  +  ++ W TL++ C V G + 
Sbjct: 417 LMDLYARLGDMEAARWIFAAIEPRDVVS-WNTLITGCVVQGHIH 459


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/686 (37%), Positives = 384/686 (55%), Gaps = 17/686 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           LA  L+ C +   L  G  LH  LV  G +     L N LI MY+ C ++  A  +F  M
Sbjct: 173 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 232

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             RN VSWT L+ G  QN      L+ F  M  + V P  F LS+  +A+  L +     
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292

Query: 134 QIHGMCMKS---GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
                C  S   GF+    V +++ DMYSKCG ++EA R+FD MP K  + W AMI GY 
Sbjct: 293 S----CTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYA 348

Query: 191 LAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             G  +  +L FR M+  G +  D+  F S L A G L        IH  +  +GF   V
Sbjct: 349 KNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEV 408

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQL 308
              +  +L+D Y K   +  A RV  +     +V+S +S+I GY + + + EA+ ++ +L
Sbjct: 409 --AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 466

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           R + ++ + F  SSM+   A  AL+EQG Q+HA   K     D+ V +++VDMY KCGLI
Sbjct: 467 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 526

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             + +LFNE+  +  + W  +I  + +HG  +EA+  F +M+   + P+ +A++++L+AC
Sbjct: 527 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 586

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH+GLV+E  +YF  +     ++P+ EHYSCI+D+ GRAGRLDEA   I  MP+KP+   
Sbjct: 587 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 646

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W +LL ACR+ G  ELG    + L++L+  N   +V +S I+A  G W + + +RKL R 
Sbjct: 647 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 706

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
             +KK+ G SWV+ +K+ H F   D +HP  + I++ L E+  R+KEE G++    +   
Sbjct: 707 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEE-GYIPDTSFLPC 765

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           ++++ +KE  LR HSE++A+  AL+    +    K I V KNLR+C DCH   K + K+ 
Sbjct: 766 NLEDIAKERILRYHSERIAVAFALI----SMPATKPIIVKKNLRICIDCHTAFKFICKVE 821

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           +   +VRD +RFH F  G CSCGDYW
Sbjct: 822 RRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 234/565 (41%), Gaps = 84/565 (14%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           LA  L+ C +   L  G  LH  LV  G +     L N LI MY+ C ++  A  +F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 74  LERNVVSWTALMCGFLQN---------------------------------GNAKACLSL 100
             RN VSWT L+ G  QN                                 G      + 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 101 FCQMGSSSV---------KPNEFTLSTNIKASGVLSS------VENGMQIHGMCMKSG-F 144
            C  G + +         +P     +T +  + +L S      +  G  +H   + SG  
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
             +  + N +I MYS C  +  A R+F  MP ++ ++W  +++G          L  F  
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 205 MQEHGEIPDEF------------TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           M+  G  P  F                  ++C +  SVG  T++                
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTEL---------------F 307

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RER 311
           +A +L D Y KCG L EA RVFD + QK  ++W+++I GYA+  +L  A+  FR + RE 
Sbjct: 308 VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 367

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  D  V  S++            K IH    K    L+ +V N+++DMY K   ++ A
Sbjct: 368 LVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESA 427

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + +    P   NVV+ T +I GY +    +EA+ ++ ++    VEP+   + +++  C+ 
Sbjct: 428 SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAM 487

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
             L+E+  +  +++     ++      S +VD  G+ G +  +  L   +  +  IA W 
Sbjct: 488 QALLEQGAQLHAQVIKTDLIRDSFVG-STLVDMYGKCGLISLSMQLFNEIEYRTDIA-WN 545

Query: 491 TLLSACRVHGDLELGREVGEILLRL 515
            +++    HG    GRE  +   R+
Sbjct: 546 AVINVFAQHGH---GREAIQAFDRM 567


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/663 (35%), Positives = 385/663 (58%), Gaps = 42/663 (6%)

Query: 33  QLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +LHG ++   +  ++  +   L+ +YA CGE   A  +FD++ ++NVV +  ++  ++ N
Sbjct: 39  KLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNN 98

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
              K  L ++  M +    P+ +T    +KAS    S+  G+QIHG  +K G + N  VG
Sbjct: 99  HLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVG 158

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N +I MY KC  + EA ++ D +P + +++WN+M++ Y   G  +  L L R+M+     
Sbjct: 159 NGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLK 218

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P++ T  S L A                 +T+    +V           YVK        
Sbjct: 219 PNDCTMASLLPA-----------------VTNTTSDNV----------LYVK-------- 243

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F  + +KSVISW+ +I  Y       EA+ L+ Q+    ++ D   + S++  + D +
Sbjct: 244 EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLS 303

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  G+++H +A +     +  + N+++DMY KCG + +A  +FN+M  ++VV+WT II+
Sbjct: 304 ALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIIS 363

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            YGK G  ++AV +F +M    + PD +A+++VL+ACSH+GL+++ + YF+ L  +  + 
Sbjct: 364 AYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFN-LMAECGIT 422

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P++EH++C+VD LGRAG++DEA   I  MP++P   +W  LLSACRV+ ++ +G    + 
Sbjct: 423 PKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADK 482

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           LL L+ ++   YV++SNI+A AG W +   +R +   KG+KK+ G S VE++  +H F  
Sbjct: 483 LLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLA 542

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD +HP ++KI++ L  +  +MK ELG++     ALHD++EE KE  L VHSEKLA+  A
Sbjct: 543 GDHSHPQSKKIYEELDVLVGKMK-ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFA 601

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           ++    N +PG  IRV KNLRVCGDCH   K +SKI +   ++RD  RFH F+ G CSCG
Sbjct: 602 II----NTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCG 657

Query: 692 DYW 694
           DYW
Sbjct: 658 DYW 660



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 39/365 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+  S++  L  G+Q+HGA++K+G   +L + N LI MY KC  +  A  V D++  R+V
Sbjct: 127 LKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDV 186

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++  + QNG     L L  +M + ++KPN+ T+++ +                  
Sbjct: 187 VSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLL------------------ 228

Query: 139 CMKSGFEWNPVVGNSIID--MYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
                    P V N+  D  +Y K         MF  +  KS+I+WN MIA YV      
Sbjct: 229 ---------PAVTNTTSDNVLYVK--------EMFLKLTKKSVISWNVMIAMYVNNSMPK 271

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + ++L+ +M+ +G  PD  +  S L A G L ++  G ++H F        ++  ++  +
Sbjct: 272 EAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNL--LLENA 329

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KCGCL +AR VF+ ++ + V+SW+S+I  Y +     +A+ +F ++R   L  D
Sbjct: 330 LIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPD 389

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                S++   +   L++ G+      A+            +VD+  + G IDEA     
Sbjct: 390 SIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIR 449

Query: 377 EMPVK 381
           +MP++
Sbjct: 450 QMPLE 454


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/705 (33%), Positives = 376/705 (53%), Gaps = 73/705 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+  LL   G ++H  ++K+GF  D+ + N LI+MYA CG M  A  +FD+    + 
Sbjct: 148 VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDS 207

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+++ G+ +    +F QM   ++                             
Sbjct: 208 VSWNSILAGYVKKGDVEEAKLIFDQMPQRNI----------------------------- 238

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                     V  NS+I +  K G++ EA ++F+ M  K +++W+A+I+GY   G  ++ 
Sbjct: 239 ----------VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 288

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF------------- 245
           L++F +M  +G   DE    S L AC  L  V  G  IHG +I  G              
Sbjct: 289 LVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHM 348

Query: 246 ----------------PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
                            +++  +   S++   +KCG + +AR +FD++ +K ++SWS++I
Sbjct: 349 YSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVI 408

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GYAQ +  +E + LF +++   ++ D  +L S++      A ++QGK +HAY  K    
Sbjct: 409 SGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLK 468

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           ++  +  +++DMY+KCG ++ A E+FN M  K V +W  +I G   +GL + ++ +F +M
Sbjct: 469 VNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEM 528

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
             + V P+ + ++ VL AC H GLV+E + +F+ +     ++P ++HY C+VD LGRAG 
Sbjct: 529 KNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGL 588

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           L+EA+ LIESMP+ P +A W  LL AC+ HGD E+G  VG  L+ L  D+   +V++SNI
Sbjct: 589 LNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNI 648

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
            A  G W +   +R + + +G+ K  G S +E +  +H F  GD THP   K+  +L EM
Sbjct: 649 FASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEM 708

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFK 649
            KR+K E G+         DI EE KE +L  HSEKLAI   L    L   P   IR+ K
Sbjct: 709 AKRLKME-GYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGL----LTISPPTPIRIMK 763

Query: 650 NLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           NLR+C DCH   K +SK      VVRD  RFH F+ G CSC DYW
Sbjct: 764 NLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 221/466 (47%), Gaps = 74/466 (15%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD++   N   W  +M  ++Q+ +A+  L L+  M  ++V P+ +T    ++A  V   
Sbjct: 97  IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G +IH   +K GF+ +  V N++I+MY+ CG + +A ++FD  P    ++WN+++AG
Sbjct: 157 EFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAG 216

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           YV  G  ++  L+F +M +                                         
Sbjct: 217 YVKKGDVEEAKLIFDQMPQR---------------------------------------- 236

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
              V + S++    K G ++EA ++F+ +++K ++SWS+LI GY Q     EA+ +F ++
Sbjct: 237 -NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM 295

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY------ 362
               +++D  V+ S++   A  ++V+ GK IH    ++      ++ N+++ MY      
Sbjct: 296 NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEI 355

Query: 363 -------------------------LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                    +KCG +++A  LF+ MP K++V+W+ +I+GY +H 
Sbjct: 356 MDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHD 415

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
              E + LF +M L  + PD    ++V+SAC+H   +++ + +         +K  +   
Sbjct: 416 CFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGK-WVHAYIRKNGLKVNVILG 474

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + ++D   + G ++ A  +   M  K  ++ W  L+    V+G +E
Sbjct: 475 TTLLDMYMKCGCVENALEVFNGMEEK-GVSSWNALIIGLAVNGLVE 519



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 178/357 (49%), Gaps = 51/357 (14%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           ++ + ++FD +   +   WN M+  Y+ +  ++K LLL++ M ++   PD +T+   ++A
Sbjct: 91  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C       GG +IH  ++  GF   V   +  +L++ Y  CG + +AR++FD       +
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDV--YVQNTLINMYAVCGNMRDARKLFDESPVLDSV 208

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+S++ GY ++ ++ EA  +F Q+ +R++                              
Sbjct: 209 SWNSILAGYVKKGDVEEAKLIFDQMPQRNI------------------------------ 238

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
                      SNS++ +  K G + EA +LFNEM  K++V+W+ +I+GY ++G+ +EA+
Sbjct: 239 ---------VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEAL 289

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            +F +M  + +  D V  ++VLSAC+H  +V+       ++ +   ++  IE Y  + ++
Sbjct: 290 VMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT-----GKMIHGLVIRMGIESYVNLQNA 344

Query: 464 L----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           L      +G + +A+ L         I+ W +++S C   G +E  R + +++   D
Sbjct: 345 LIHMYSGSGEIMDAQKLFNGSHNLDQIS-WNSMISGCMKCGSVEKARALFDVMPEKD 400



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 2/195 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    LD G  +H  + K G   +++L   L+DMY KCG +  A  VF+ M 
Sbjct: 439 LVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME 498

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM- 133
           E+ V SW AL+ G   NG  +  L +F +M ++ V PNE T    + A   +  V+ G  
Sbjct: 499 EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRC 558

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLA 192
               M  K G E N      ++D+  + G +NEA ++ + MP A  + TW A++      
Sbjct: 559 HFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKH 618

Query: 193 GYSDKGLLLFRKMQE 207
           G ++ G  + RK+ E
Sbjct: 619 GDTEMGERVGRKLIE 633



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 146/292 (50%), Gaps = 13/292 (4%)

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           ++FD IE  +   W++++  Y Q  +  +A+ L++ + + ++  D +    ++   A   
Sbjct: 96  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           L   GK+IH +  KV    D  V N++++MY  CG + +A +LF+E PV + V+W  I+ 
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY K G  +EA  +F +M   ++    VA  +++      G V E+ + F+ + ++K M 
Sbjct: 216 GYVKKGDVEEAKLIFDQMPQRNI----VASNSMIVLLGKMGQVMEAWKLFNEM-DEKDMV 270

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREV 508
                +S ++    + G  +EA  +   M    ++    +  ++LSAC     ++ G+ +
Sbjct: 271 S----WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMI 326

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
             +++R+  ++ VN +  + IH  +GS    +  +    S  L +++  S +
Sbjct: 327 HGLVIRMGIESYVN-LQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMI 377


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/669 (34%), Positives = 378/669 (56%), Gaps = 12/669 (1%)

Query: 31  GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
             QLH   +++G     +  +  L+  Y + G ++ A  VFD+M ER+V +W A++ G  
Sbjct: 86  AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLC 145

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +N  A   + LF +M    V  +  T+S+ +    +L      + +H   +K G +    
Sbjct: 146 RNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELF 205

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N++ID+Y K G + EA  +F  M  + L+TWN++I+G    G +   L +F+ M+  G
Sbjct: 206 VCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSG 265

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLV 268
             PD  T  S   A    G       +H +++  G  + V  +IAG ++VD Y K   + 
Sbjct: 266 VSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRG--WDVDDIIAGNAIVDMYAKLSNIE 323

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVF 327
            A+R+FD +  +  +SW++LI GY Q     EA+E +  + +   L+       S++  +
Sbjct: 324 AAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAY 383

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +    ++QG ++HA + K+   +D  V   ++D+Y KCG + EA  LF +MP ++   W 
Sbjct: 384 SHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWN 443

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II+G G HG   EA+ LF +M  + ++PD V ++++L+ACSH+GLV++ + +F  +   
Sbjct: 444 AIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVT 503

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P  +HY+C+ D LGRAG+LDEA N I++MP+KP  A+W  LL ACR+HG++E+G+ 
Sbjct: 504 YDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKV 563

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + L  LD +N   YV+MSN++A  G W+  + +R L R + L+K  G S +EV + ++
Sbjct: 564 ASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVN 623

Query: 568 FFYGGDDT--HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
            FY G+ T  HP  E+I   L  +  +++  +G+V    + L D++++ KE  L  HSE+
Sbjct: 624 VFYSGNQTEPHPQHEEIQAELRSLLAKIR-SVGYVSDYSFVLQDVEDDEKEHILNNHSER 682

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI   ++    N      + ++KNLRVCGDCH   K +S+I +   +VRD+ RFH F+ 
Sbjct: 683 LAIAFGII----NTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKD 738

Query: 686 GVCSCGDYW 694
           G CSCGD+W
Sbjct: 739 GHCSCGDFW 747



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 154/316 (48%), Gaps = 11/316 (3%)

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQE--HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           N +IA +  A        L R +    +   PD FTF S ++A  S  S     Q+H   
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +  G         +GSLV  Y++ G + EA +VFD + ++ V +W++++ G  +    AE
Sbjct: 94  LRLGL-VRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAE 152

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSI 358
           A+ LF ++    +  D   +SS++ +            +H YA K   GLD    V N++
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVK--HGLDKELFVCNAL 210

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +D+Y K G+++EA  +F+ M  +++VTW  II+G  + G    A+ +F+ M    V PD 
Sbjct: 211 IDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDV 270

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           +  +++ SA +  G    ++     +         I   + IVD   +   ++ A+ + +
Sbjct: 271 LTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFD 330

Query: 479 SMPVKPSIAIWQTLLS 494
           SMPV+ S++ W TL++
Sbjct: 331 SMPVQDSVS-WNTLIT 345



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 4/174 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G+++H   +K+G + D+ +   LID+YAKCG++  A  +F+KM  R+   W A++ G
Sbjct: 389 LQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISG 448

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              +G+    L+LF +M    +KP+  T  + + A      V+ G     + M+  ++  
Sbjct: 449 LGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV-MQVTYDIV 507

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSDKG 198
           P+  +   + DM  + G+++EA      MP K     W A++    + G  + G
Sbjct: 508 PIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMG 561


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/665 (36%), Positives = 387/665 (58%), Gaps = 15/665 (2%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q H  ++K GF  ++   + L+D   KCG+++ A  VFD M ER++V+W +L+   +++
Sbjct: 87  IQAH--MLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE-WNPVV 150
             +K  + ++  M +++V P+E+TLS+  KA   LS  +   + HG+ +  G E  N  V
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++++DMY K G+  EA  + D +  K ++   A+I GY   G   + +  F+ M     
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+E+T+ S L +CG+L  +G G  IHG ++ SGF  ++ +    SL+  Y++C  + ++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS--QTSLLTMYLRCSLVDDS 321

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            RVF  IE  + +SW+SLI G  Q      A+  FR++   S++ + F LSS +   ++ 
Sbjct: 322 LRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNL 381

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A+ E+G+QIH    K     D    + ++D+Y KCG  D A  +F+ +   +V++   +I
Sbjct: 382 AMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMI 441

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G  +EA+ LF +M+   ++P+ V  L+VL AC++S LVEE  E F     DK M
Sbjct: 442 YSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIM 501

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
               +HY+C+VD LGRAGRL+EA+ L   + + P + +W+TLLSAC+VH  +E+   +  
Sbjct: 502 LTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITR 559

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L ++  +    ++MSN++A  G WN    ++   +   LKK    SWVE++KE H F 
Sbjct: 560 KILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFM 619

Query: 571 GGD-DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
            GD  +HP +E+I + L E+ K+ K +LG+V        D++E +KE SL  HSEKLAI 
Sbjct: 620 AGDLFSHPNSEQILENLEELIKKSK-DLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIA 678

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
            A+ R       G  IR+ KNLRVC DCH +IK +S+++K   + RD+ RFH F  G CS
Sbjct: 679 FAVWR-----NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCS 733

Query: 690 CGDYW 694
           CGDYW
Sbjct: 734 CGDYW 738



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 135/280 (48%), Gaps = 2/280 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG +VK GF   L     L+ MY +C  ++ +  VF  +   N VSWT+L+ G +Q
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQ 345

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L  F +M   S+KPN FTLS+ ++    L+  E G QIHG+  K GF+ +   
Sbjct: 346 NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA 405

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G+ +ID+Y KCG  + A  +FD +    +I+ N MI  Y   G+  + L LF +M   G 
Sbjct: 406 GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL 465

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ T  S L AC +   V  G ++           +        +VD   + G L EA
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY--ACMVDLLGRAGRLEEA 523

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +   +    ++ W +L+        +  A  + R++ E
Sbjct: 524 EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE 563



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +LR CS   + + G Q+HG + K GF  D    + LID+Y KCG  + A  VFD + 
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E +V+S   ++  + QNG  +  L LF +M +  ++PN+ T+ + + A      VE G +
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCE 490

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +     K            ++D+  + GR+ EA  +   +    L+ W  +++ 
Sbjct: 491 LFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 341/578 (58%), Gaps = 8/578 (1%)

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           +T +K   V   +  G  +HG  ++S F  + V+ N++++MY+KCG + EA ++FD MP 
Sbjct: 55  NTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPE 114

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +  +TW  +I+GY         L+LF +M   G  P+EFT +S +KA  +      G Q+
Sbjct: 115 RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQL 174

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HGF +  GF  +V   +  +L+D Y + G + +A+ VFD +E ++ +SW++LI G+A+  
Sbjct: 175 HGFCVKCGFDSNVH--VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRC 232

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A+ELF+ +     +   F  +S+ G  +    +EQGK +HAY  K    L     N
Sbjct: 233 GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 292

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +++DMY K G I +A ++F+ +  ++VV+W  ++T Y +HG   EAV  F +M    + P
Sbjct: 293 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRP 352

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + +++L+VL+ACSHSGL++E   Y+  +  D  +     HY  IVD LGRAG L+ A   
Sbjct: 353 NEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVLEAWHYVTIVDLLGRAGDLNRALRF 411

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           IE MP++P+ AIW+ LL+ACR+H + ELG    E +  LD D+P  +V++ NI+A  G W
Sbjct: 412 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 471

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           N+  R+RK  +  G+KK    SWVE++  IH F   D+ HP  E+I +   E+  ++K E
Sbjct: 472 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK-E 530

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           LG+V    + +  + ++ +E +L+ HSEK+A+  AL    LN  PG  I + KN+RVCGD
Sbjct: 531 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFAL----LNTPPGSTIHIKKNIRVCGD 586

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH  IK  SK +    +VRD  RFH F+ G CSC DYW
Sbjct: 587 CHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 223/415 (53%), Gaps = 5/415 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+   LL  G  +HG L++  F  DL++NN L++MYAKCG +  A  VFDKM ER+ 
Sbjct: 58  LKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDF 117

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT L+ G+ Q+      L LF QM      PNEFTLS+ IKA+        G Q+HG 
Sbjct: 118 VTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGF 177

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           C+K GF+ N  VG++++D+Y++ G +++A  +FD + +++ ++WNA+IAG+     ++K 
Sbjct: 178 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKA 237

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF+ M   G  P  F++ S   AC S G +  G  +H ++I SG    +      +L+
Sbjct: 238 LELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG--EKLVAFAGNTLL 295

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G + +AR++FD + ++ V+SW+SL+  YAQ     EA+  F ++R   ++ +  
Sbjct: 296 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEI 355

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S++   +   L+++G   +    K    L+     +IVD+  + G ++ A     EM
Sbjct: 356 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEM 415

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           P++     W  ++     H      +G +    + +++PD      +L     SG
Sbjct: 416 PIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 468



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 155/291 (53%), Gaps = 5/291 (1%)

Query: 211 IPDEFTFTSTL-KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           IP +  F +TL K C     +  G  +HG LI S F + +  V+  +L++ Y KCG L E
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDL--VMNNTLLNMYAKCGSLEE 104

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VFD + ++  ++W++LI GY+Q +   +A+ LF Q+       + F LSS++   A 
Sbjct: 105 ARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA 164

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                 G Q+H +  K     +  V ++++D+Y + GL+D+A  +F+ +  +N V+W  +
Sbjct: 165 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 224

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I G+ +    ++A+ LF+ ML +   P   +Y ++  ACS +G +E+ +   + +     
Sbjct: 225 IAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 284

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            K      + ++D   ++G + +A+ + + +  K  +  W +LL+A   HG
Sbjct: 285 -KLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 333



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 7/217 (3%)

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           + VD    ++++     F L+ QG+ +H +  +     D  ++N++++MY KCG ++EA 
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS--H 430
           ++F++MP ++ VTWT +I+GY +H    +A+ LF +ML     P+     +V+ A +   
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            G        F   C        +   S ++D   R G +D+A+ + +++  +  ++ W 
Sbjct: 167 RGCCGHQLHGFCVKCG---FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WN 222

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
            L++        E   E+ + +LR +G  P ++   S
Sbjct: 223 ALIAGHARRCGTEKALELFQGMLR-EGFRPSHFSYAS 258


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/579 (37%), Positives = 347/579 (59%), Gaps = 10/579 (1%)

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           T +K    L+ +  G  IH + + S F  + V+ N+++++Y+KCG +  A ++FD M ++
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQ 235
            ++TW A+I GY         LLL  +M   G  P++FT  S LKA   +GS  V  G Q
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +HG  +  G+  +V   ++ +++D Y +C  L EA+ +FD++  K+ +SW++LI GYA++
Sbjct: 140 LHGLCLRYGYDSNV--YVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               +A  LF  +   +++   F  SS++   A    +EQGK +HA   K    L   V 
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+++DMY K G I++A ++F+ +  ++VV+W  ++TGY +HGL K A+  F +ML   + 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P+ + +L VL+ACSH+GL++E + YF  +     ++P+I HY  +VD LGRAG LD A  
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            I  MP+KP+ A+W  LL ACR+H ++ELG    E +  LD   P  +V++ NI+A AG 
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           WN+  ++RK+ +  G+KK    SWVE++ E+H F   DD HP   +IH +  ++  ++K 
Sbjct: 437 WNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK- 495

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
           E+G+V    + L  + ++ +E  L+ HSEKLA+  AL    LN  PG  IR+ KN+R+CG
Sbjct: 496 EIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFAL----LNTPPGSTIRIKKNIRICG 551

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH   K +SK+++   +VRD  RFH F  G CSC DYW
Sbjct: 552 DCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 213/375 (56%), Gaps = 5/375 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G  +H  L+   F  DL++ N L+++YAKCG++  A  +FD+M  R+V
Sbjct: 22  LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK-ASGVLSS-VENGMQIH 136
           V+WTAL+ G+ Q+   +  L L  +M    +KPN+FTL++ +K ASGV S+ V  G Q+H
Sbjct: 82  VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G+C++ G++ N  V  +I+DMY++C  + EA  +FDVM +K+ ++WNA+IAGY   G  D
Sbjct: 142 GLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD 201

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K   LF  M      P  FT++S L AC S+GS+  G  +H  +I  G    +   +  +
Sbjct: 202 KAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWG--EKLVAFVGNT 259

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y K G + +A++VFD + ++ V+SW+S++ GY+Q      A++ F ++    +  +
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                 ++   +   L+++G+       K       S   ++VD+  + G +D A +  +
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 377 EMPVK-NVVTWTVII 390
           EMP+K     W  ++
Sbjct: 380 EMPIKPTAAVWGALL 394



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 136/269 (50%), Gaps = 3/269 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG  ++ G+  ++ ++  ++DMYA+C  +  A  +FD M+ +N VSW AL+ G+ +
Sbjct: 137 GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G       LF  M   +VKP  FT S+ + A   + S+E G  +H + +K G +    V
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV 256

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++DMY+K G I +A ++FD +  + +++WN+M+ GY   G     L  F +M     
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ TF   L AC   G +  G   H F +   +    +     ++VD   + G L  A
Sbjct: 317 APNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRA 374

Query: 271 RRVFDLIEQKSVIS-WSSLILGYAQEENL 298
            +    +  K   + W +L+      +N+
Sbjct: 375 IQFISEMPIKPTAAVWGALLGACRMHKNM 403


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/677 (35%), Positives = 381/677 (56%), Gaps = 52/677 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y K   ++ A  +FD M ER+VVSW  ++    Q+G  +  L +   M S  V+
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T ++++ A   LSS+  G Q+H   +++    +P V ++++++Y+K G   EA  +
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 327

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ +  ++ + W  +I+G++  G   + + LF +M+      D+F   + +  C S   +
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H   + SG   +V  V++ SL+  Y KC  L  A  +F  + +K ++SW+S+I 
Sbjct: 388 CLGRQLHSLCLKSGQIQAV--VVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445

Query: 291 GYAQEENLAEAMELFRQLRERSL---------------QVDGFVLSSMM----------- 324
            Y+Q  N+A+A E F  + E+++               + DG  +  +M           
Sbjct: 446 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWV 505

Query: 325 ---GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +F   AD    + G QI     KV   +DTSV+N+++ MY KCG I EA ++F+ +
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL 565

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            VK++V+W  +ITGY +HG+ K+A+ +F  +L    +PD ++Y+AVLS CSHSGLV+E +
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+KP+  +W  LLSAC++
Sbjct: 626 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 685

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+ EL     + +  LD  +  +Y++M+ I+ADAG  ++  ++RKL R KG+KK  G S
Sbjct: 686 HGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD ++H F   D +HP    I + L E+ +++   LG+V          + +S    
Sbjct: 746 WMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIA-RLGYV----------RTDSTRSE 794

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +  HSEKLA+       GL   P  + I + KNLR+CGDCH  IK +S +    FV+RDA
Sbjct: 795 IH-HSEKLAVAF-----GLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDA 848

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F GG CSCGDYW
Sbjct: 849 VRFHHFNGGSCSCGDYW 865



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 263/601 (43%), Gaps = 113/601 (18%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLI------------------ 54
           Q  AD+LR C     L     LHG LV +G +  + L N L+                  
Sbjct: 5   QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 64

Query: 55  --------------DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                         + YAK G ++ A  +F +M  R+V SW  LM G+ Q+      L  
Sbjct: 65  DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 124

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FTL+  +K+ G L      +Q+  M  K   + +  V  +++DM+ 
Sbjct: 125 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184

Query: 160 KCGRINEAAR-------------------------------MFDVMPAKSLITWNAMIAG 188
           +CG ++ A+R                               +FD MP + +++WN M++ 
Sbjct: 185 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G   + L +   MQ  G   D  T+TS+L AC  L S+  G Q+H  +I +  P+ 
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPH- 302

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A +LV+ Y K GC  EA+ VF+ +  ++ ++W+ LI G+ Q     E++ELF Q+
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 362

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC--- 365
           R   + +D F L++++        +  G+Q+H+   K        VSNS++ MY KC   
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422

Query: 366 ----------------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                       G + +A E F+ M  KNV+TW  ++  Y +HG
Sbjct: 423 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 482

Query: 398 LAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQEYFSR-----LCNDKRMK 451
             ++ + +++ ML ++ V PD V Y+ +   C+  G  +   +   R     L  D  + 
Sbjct: 483 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVA 542

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
                 + ++    + GR+ EA+ + + + VK  I  W  +++    HG   +G++  EI
Sbjct: 543 ------NAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG---MGKQAIEI 592

Query: 512 L 512
            
Sbjct: 593 F 593



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 283/603 (46%), Gaps = 69/603 (11%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L +G QLH  +++     D  + + L+++YAK G    A  VF+ + +RN
Sbjct: 276 SLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN 335

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN--GMQI 135
            V+WT L+ GFLQ G     + LF QM +  +  ++F L+T I  SG  S ++   G Q+
Sbjct: 336 NVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLI--SGCCSRMDLCLGRQL 393

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRI 164
           H +C+KSG     VV NS+I MY+KC                               G +
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 453

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKA 223
            +A   FD M  K++ITWNAM+  Y+  G  + GL +++ M  E    PD  T+ +  K 
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  LG+   G QI G  +  G    + T +A +++  Y KCG ++EAR+VFD +  K ++
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLI--IDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 571

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIH 340
           SW+++I GY+Q     +A+E+F  + +R  + D     +++   +   LV++GK    + 
Sbjct: 572 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMM 631

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLA 399
             A  +  GL+    + +VD+  + G + EA +L ++MP+K     W  +++    HG  
Sbjct: 632 KRAHNISPGLEH--FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-N 688

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
            E   L  K + +   PD  +Y+ +    + +G  ++S +   +L  DK +K    +   
Sbjct: 689 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ-IRKLMRDKGIKKNPGYSWM 747

Query: 460 IVDSLGRAGRLDEA---------KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            VD+     + D+          K L E M     +   +T  +   +H   +L    G 
Sbjct: 748 EVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAFG- 806

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK-EIHFF 569
            L+ L    P++  +M N+        +C  + KL     +  V GR +V  D    H F
Sbjct: 807 -LMTLPTWMPIH--IMKNLRI----CGDCHTVIKL-----ISTVTGREFVIRDAVRFHHF 854

Query: 570 YGG 572
            GG
Sbjct: 855 NGG 857



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 207/457 (45%), Gaps = 75/457 (16%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +++ Y+K GR+++A  +F  MPA+ + +WN +++GY  +      L  F  M 
Sbjct: 70  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129

Query: 207 EHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G+  P+ FT    +K+CG+LG      Q+    +   F     + +A +LVD +V+CG
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQL--LAMVQKFDSQDDSEVAAALVDMFVRCG 187

Query: 266 CLVEARR-------------------------------VFDLIEQKSVISWSSLILGYAQ 294
            +  A R                               +FD + ++ V+SW+ ++   +Q
Sbjct: 188 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              + EA+++   ++ + +++D    +S +   A  + +  GKQ+HA   +    +D  V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 307

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           ++++V++Y K G   EA  +FN +  +N V WTV+I+G+ ++G   E+V LF +M  + +
Sbjct: 308 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 367

Query: 415 EPDGVAYLAVLSACS----------------HSGLVE------------------ESQEY 440
             D  A   ++S C                  SG ++                  +S E 
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 427

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R  N+K     I  ++ ++ +  + G + +A+   + M  K ++  W  +L A   HG
Sbjct: 428 IFRFMNEK----DIVSWTSMITAYSQVGNVAKAREFFDGMSEK-NVITWNAMLGAYIQHG 482

Query: 501 DLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGS 535
             E G  + +++L  +   P  V YV +    AD G+
Sbjct: 483 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA 519


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/682 (35%), Positives = 375/682 (54%), Gaps = 29/682 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ C++    D G +LHG   K GF+ D+ + N L++MY KCG +  A  VFD+M 
Sbjct: 91  LPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMP 150

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVSWT ++  ++++      L L  +M    VK +   L + I   G L  +++G  
Sbjct: 151 ERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRA 210

Query: 135 IHGMCMKS-GFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           +HG  +++ G E   V +  ++IDMY K G +  A R+FD +  +S+++W  MIAG + +
Sbjct: 211 VHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRS 270

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              D+G   F +M E    P+E T  S +  CG +G++  G   H +L+ +GF  S+  V
Sbjct: 271 CRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALV 330

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
            A  L+D Y KCG +  AR +F+ +++K V  WS LI  YA    + +   LF ++    
Sbjct: 331 TA--LIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNND 388

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ +   + S++ + A+   ++ GK  HAY  +    +D  +  ++++MY KCG +  A 
Sbjct: 389 VKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIAR 448

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            LFNE   +++  W  ++ G+  HG  KEA+ LF +M    VEP+ + ++++  ACSHSG
Sbjct: 449 SLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           L                    +EHY C+VD LGRAG LDEA N+IE+MP++P+  IW  L
Sbjct: 509 L--------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGAL 548

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           L+AC++H +L LG      +L LD  N    V+ SNI+A A  WN+   +R+     G+K
Sbjct: 549 LAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMK 608

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           K  G SW+EV   +H F  GD     T K+++++ EM  +++E  G+       L +I E
Sbjct: 609 KEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRES-GYTPNTAAVLLNIDE 667

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
           E KE +L  HSEKLA    L+    +  PG  IR+ KNLR+C DCH   K LSKI     
Sbjct: 668 EEKESALSYHSEKLATAFGLI----STAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTI 723

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
           +VRD  RFH F  G CSC  YW
Sbjct: 724 IVRDRNRFHHFSEGYCSCMGYW 745



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 232/455 (50%), Gaps = 8/455 (1%)

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++  L+  +  N   +A  + +  M S+     + F L + +KA    SS + G ++HG 
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K+GF  +  V N++++MY KCG +  A  +FD MP + +++W  M+  YV +    + 
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L R+MQ  G         S +   G+L  +  G  +HG+++ +     ++  +  +L+
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K GCL  A+R+FD + ++SV+SW+ +I G  +   L E  + F ++ E  L  +  
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L S++        ++ GK  HAY  +   G+  ++  +++DMY KCG +  A  LFN +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V  W+V+I+ Y       +   LF +ML +DV+P+ V  +++LS C+ +G ++  +
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
              + + N   ++  +   + +++   + G +  A++L     ++  I +W T+++   +
Sbjct: 414 WTHAYI-NRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSM 471

Query: 499 HGDLELGREVGEILLRLD--GDNPVNYVMMSNIHA 531
           HG    G+E  E+   ++  G  P +   +S  HA
Sbjct: 472 HG---CGKEALELFSEMESHGVEPNDITFVSIFHA 503


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/677 (35%), Positives = 381/677 (56%), Gaps = 52/677 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y K   ++ A  +FD M ER+VVSW  ++    Q+G  +  L +   M S  V+
Sbjct: 228 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T ++++ A   LSS+  G Q+H   +++    +P V ++++++Y+K G   EA  +
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 347

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ +  ++ + W  +I+G++  G   + + LF +M+      D+F   + +  C S   +
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 407

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H   + SG   +V  V++ SL+  Y KC  L  A  +F  + +K ++SW+S+I 
Sbjct: 408 CLGRQLHSLCLKSGQIQAV--VVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465

Query: 291 GYAQEENLAEAMELFRQLRERSL---------------QVDGFVLSSMM----------- 324
            Y+Q  N+A+A E F  + E+++               + DG  +  +M           
Sbjct: 466 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWV 525

Query: 325 ---GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +F   AD    + G QI     KV   +DTSV+N+++ MY KCG I EA ++F+ +
Sbjct: 526 TYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL 585

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            VK++V+W  +ITGY +HG+ K+A+ +F  +L    +PD ++Y+AVLS CSHSGLV+E +
Sbjct: 586 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 645

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+KP+  +W  LLSAC++
Sbjct: 646 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 705

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+ EL     + +  LD  +  +Y++M+ I+ADAG  ++  ++RKL R KG+KK  G S
Sbjct: 706 HGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 765

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EVD ++H F   D +HP    I + L E+ +++   LG+V          + +S    
Sbjct: 766 WMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIA-RLGYV----------RTDSTRSE 814

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +  HSEKLA+       GL   P  + I + KNLR+CGDCH  IK +S +    FV+RDA
Sbjct: 815 IH-HSEKLAVAF-----GLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDA 868

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F GG CSCGDYW
Sbjct: 869 VRFHHFNGGSCSCGDYW 885



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 263/601 (43%), Gaps = 113/601 (18%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLI------------------ 54
           Q  AD+LR C     L     LHG LV +G +  + L N L+                  
Sbjct: 25  QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 84

Query: 55  --------------DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                         + YAK G ++ A  +F +M  R+V SW  LM G+ Q+      L  
Sbjct: 85  DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 144

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FTL+  +K+ G L      +Q+  M  K   + +  V  +++DM+ 
Sbjct: 145 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204

Query: 160 KCGRINEAAR-------------------------------MFDVMPAKSLITWNAMIAG 188
           +CG ++ A+R                               +FD MP + +++WN M++ 
Sbjct: 205 RCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 264

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G   + L +   MQ  G   D  T+TS+L AC  L S+  G Q+H  +I +  P+ 
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPH- 322

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A +LV+ Y K GC  EA+ VF+ +  ++ ++W+ LI G+ Q     E++ELF Q+
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 382

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC--- 365
           R   + +D F L++++        +  G+Q+H+   K        VSNS++ MY KC   
Sbjct: 383 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 442

Query: 366 ----------------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                                       G + +A E F+ M  KNV+TW  ++  Y +HG
Sbjct: 443 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 502

Query: 398 LAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQEYFSR-----LCNDKRMK 451
             ++ + +++ ML ++ V PD V Y+ +   C+  G  +   +   R     L  D  + 
Sbjct: 503 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVA 562

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
                 + ++    + GR+ EA+ + + + VK  I  W  +++    HG   +G++  EI
Sbjct: 563 ------NAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG---MGKQAIEI 612

Query: 512 L 512
            
Sbjct: 613 F 613



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 283/603 (46%), Gaps = 69/603 (11%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L +G QLH  +++     D  + + L+++YAK G    A  VF+ + +RN
Sbjct: 296 SLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN 355

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN--GMQI 135
            V+WT L+ GFLQ G     + LF QM +  +  ++F L+T I  SG  S ++   G Q+
Sbjct: 356 NVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLI--SGCCSRMDLCLGRQL 413

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRI 164
           H +C+KSG     VV NS+I MY+KC                               G +
Sbjct: 414 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 473

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKA 223
            +A   FD M  K++ITWNAM+  Y+  G  + GL +++ M  E    PD  T+ +  K 
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  LG+   G QI G  +  G    + T +A +++  Y KCG ++EAR+VFD +  K ++
Sbjct: 534 CADLGANKLGDQIIGRTVKVGLI--IDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 591

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIH 340
           SW+++I GY+Q     +A+E+F  + +R  + D     +++   +   LV++GK    + 
Sbjct: 592 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMM 651

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLA 399
             A  +  GL+    + +VD+  + G + EA +L ++MP+K     W  +++    HG  
Sbjct: 652 KRAHNISPGLEH--FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG-N 708

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
            E   L  K + +   PD  +Y+ +    + +G  ++S +   +L  DK +K    +   
Sbjct: 709 NELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ-IRKLMRDKGIKKNPGYSWM 767

Query: 460 IVDSLGRAGRLDEA---------KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            VD+     + D+          K L E M     +   +T  +   +H   +L    G 
Sbjct: 768 EVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEKLAVAFG- 826

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK-EIHFF 569
            L+ L    P++  +M N+        +C  + KL     +  V GR +V  D    H F
Sbjct: 827 -LMTLPTWMPIH--IMKNLRI----CGDCHTVIKL-----ISTVTGREFVIRDAVRFHHF 874

Query: 570 YGG 572
            GG
Sbjct: 875 NGG 877



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 207/457 (45%), Gaps = 75/457 (16%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +++ Y+K GR+++A  +F  MPA+ + +WN +++GY  +      L  F  M 
Sbjct: 90  NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149

Query: 207 EHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G+  P+ FT    +K+CG+LG      Q+    +   F     + +A +LVD +V+CG
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQL--LAMVQKFDSQDDSEVAAALVDMFVRCG 207

Query: 266 CLVEARR-------------------------------VFDLIEQKSVISWSSLILGYAQ 294
            +  A R                               +FD + ++ V+SW+ ++   +Q
Sbjct: 208 AVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 267

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              + EA+++   ++ + +++D    +S +   A  + +  GKQ+HA   +    +D  V
Sbjct: 268 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV 327

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           ++++V++Y K G   EA  +FN +  +N V WTV+I+G+ ++G   E+V LF +M  + +
Sbjct: 328 ASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 387

Query: 415 EPDGVAYLAVLSACS----------------HSGLVE------------------ESQEY 440
             D  A   ++S C                  SG ++                  +S E 
Sbjct: 388 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEA 447

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R  N+K     I  ++ ++ +  + G + +A+   + M  K ++  W  +L A   HG
Sbjct: 448 IFRFMNEK----DIVSWTSMITAYSQVGNVAKAREFFDGMSEK-NVITWNAMLGAYIQHG 502

Query: 501 DLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGS 535
             E G  + +++L  +   P  V YV +    AD G+
Sbjct: 503 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA 539


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 375/663 (56%), Gaps = 41/663 (6%)

Query: 33  QLHGALV-KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +LH  +V       D  L   L+  Y+  GE + A  +FD+ LE+NVV +  ++  ++ N
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                 LS+F  M S +  P+ +T    +KA   L ++  G+Q+H   +K G + N  +G
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++ MY KCG + EA ++ D MP + +++WN+M+AGY  +G  D  L + ++M      
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM------ 229

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D            SL  V   T +           +V+ +                   
Sbjct: 230 -DSLNLNHDAGTMASLSPVVCYTSLE----------NVQYI------------------H 260

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F+ + +K++ISW+ +I  Y       EA+ LF Q+ E  ++ D   ++S++    D +
Sbjct: 261 NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLS 320

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  G+++H Y  K     +  + N+++DMY KCG ++EA ++F++M +++VV+WT +++
Sbjct: 321 ALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            YG+ G   +AV LF KML     PD +A+++VLSACSH+GL+++ + YF  +     + 
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIV 440

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           PRIEH++C+VD  GRAG ++EA + I+ MP++P+  +W  LLSACRVH  +++G    ++
Sbjct: 441 PRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADL 500

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L +L       YV++SNI+A AG W +   +R   +  G+KKV G S VE++ ++H F  
Sbjct: 501 LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLA 560

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD  HP  + I+  L  +  +MK ELG++   + ALHD++ E KE  L +HSEKLAI  A
Sbjct: 561 GDQYHPQAKNIYGELDVLVGKMK-ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFA 619

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           +    LN + G  IR+ KNLRVCGDCH  IK +SKI+    +VRD  RFH F  G+CSCG
Sbjct: 620 I----LNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCG 675

Query: 692 DYW 694
           DYW
Sbjct: 676 DYW 678



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 41/411 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  G+Q+H A+VK+G   +L + N L+ MY KCG +  A  V D+M  R+V
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDV 203

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+ Q+G     L +  +M S ++  +  T+++ +      +S+EN   IH  
Sbjct: 204 VSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHN- 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                          MF+ M  K+LI+WN MIA YV     ++ 
Sbjct: 262 -------------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF +M+E G  PD  T  S L ACG L ++  G ++H ++       ++  ++  +L+
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNL--LLENALL 348

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCGCL EAR VFD +  + V+SW+S++  Y +     +A+ LF ++ +     D  
Sbjct: 349 DMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSI 408

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
              S++   +   L++QG+       +   G+   + +   +VD++ + G ++EA     
Sbjct: 409 AFVSVLSACSHTGLLDQGRHYFRMMTE-QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +MP++ N   W  +++    H  +K  +GL    LL  + P    Y  +LS
Sbjct: 468 QMPMEPNERVWGALLSACRVH--SKMDIGLVAADLLFQLAPKQSGYYVLLS 516



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C     L  G +LH  + K     +L+L N L+DMYAKCG +  A  VFDKM 
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSWT++M  + ++G     ++LF +M  S   P+     + + A      ++ G  
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
              M M   +   P + +   ++D++ + G + EA      MP + +   W A+++   +
Sbjct: 429 YFRM-MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 192 AGYSDKGLL 200
               D GL+
Sbjct: 488 HSKMDIGLV 496


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 375/663 (56%), Gaps = 41/663 (6%)

Query: 33  QLHGALV-KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +LH  +V       D  L   L+  Y+  GE + A  +FD+ LE+NVV +  ++  ++ N
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNN 115

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                 LS+F  M S +  P+ +T    +KA   L ++  G+Q+H   +K G + N  +G
Sbjct: 116 NLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++ MY KCG + EA ++ D MP + +++WN+M+AGY  +G  D  L + ++M      
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM------ 229

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
            D            SL  V   T +           +V+ +                   
Sbjct: 230 -DSLNLNHDAGTMASLSPVVCYTSLE----------NVQYI------------------H 260

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +F+ + +K++ISW+ +I  Y       EA+ LF Q+ E  ++ D   ++S++    D +
Sbjct: 261 NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLS 320

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +  G+++H Y  K     +  + N+++DMY KCG ++EA ++F++M +++VV+WT +++
Sbjct: 321 ALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            YG+ G   +AV LF KML     PD +A+++VLSACSH+GL+++ + YF  +     + 
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIV 440

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           PRIEH++C+VD  GRAG ++EA + I+ MP++P+  +W  LLSACRVH  +++G    ++
Sbjct: 441 PRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADL 500

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L +L       YV++SNI+A AG W +   +R   +  G+KKV G S VE++ ++H F  
Sbjct: 501 LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLA 560

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD  HP  + I+  L  +  +MK ELG++   + ALHD++ E KE  L +HSEKLAI  A
Sbjct: 561 GDQYHPQAKNIYGELDVLVGKMK-ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFA 619

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           +    LN + G  IR+ KNLRVCGDCH  IK +SKI+    +VRD  RFH F  G+CSCG
Sbjct: 620 I----LNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCG 675

Query: 692 DYW 694
           DYW
Sbjct: 676 DYW 678



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 201/411 (48%), Gaps = 41/411 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  G+Q+H A+VK+G   +L + N L+ MY KCG +  A  V D+M  R+V
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDV 203

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+ Q+G     L +  +M S ++  +  T+++ +      +S+EN   IH  
Sbjct: 204 VSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHN- 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                          MF+ M  K+LI+WN MIA YV     ++ 
Sbjct: 262 -------------------------------MFERMTKKNLISWNVMIAIYVNNSMPNEA 290

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF +M+E G  PD  T  S L ACG L ++  G ++H ++       ++  ++  +L+
Sbjct: 291 VSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNL--LLENALL 348

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCGCL EAR VFD +  + V+SW+S++  Y +     +A+ LF ++ +     D  
Sbjct: 349 DMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSI 408

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
              S++   +   L++QG+       +   G+   + +   +VD++ + G ++EA     
Sbjct: 409 AFVSVLSACSHTGLLDQGRHYFRMMTE-QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +MP++ N   W  +++    H  +K  +GL    LL  + P    Y  +LS
Sbjct: 468 QMPMEPNERVWGALLSACRVH--SKMDIGLVAADLLFQLAPKQSGYYVLLS 516



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C     L  G +LH  + K     +L+L N L+DMYAKCG +  A  VFDKM 
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMR 368

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSWT++M  + ++G     ++LF +M  S   P+     + + A      ++ G  
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
              M M   +   P + +   ++D++ + G + EA      MP + +   W A+++   +
Sbjct: 429 YFRM-MTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 192 AGYSDKGLL 200
               D GL+
Sbjct: 488 HSKMDIGLV 496


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/678 (34%), Positives = 381/678 (56%), Gaps = 29/678 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG + K G   D+ +   L++ Y +CG    A  +FD M ERNVV+WTAL+ G+  N  
Sbjct: 100 VHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L +F +M      P+ +TL   + A      V+ G Q+HG  +K G E    +GNS
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK-----GLLLFRKMQEH 208
           +  +Y+K G ++ A R F  +P K++ITW  MI+    A   D+     GL LF  M   
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS----ACAEDEECVELGLSLFIDMLMD 275

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G +P+EFT TS +  CG+   +  G Q+  F    G   ++   +  S +  Y++ G   
Sbjct: 276 GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP--VKNSTMYLYLRKGETD 333

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLRERSLQVDG 317
           EA R+F+ +E  S+I+W+++I GYAQ  + A           +A+ +FR L+   ++ D 
Sbjct: 334 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDL 393

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F  SS++ V +    +EQG+QIHA   K     D  V++++V+MY KCG I +A + F E
Sbjct: 394 FTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLE 453

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP +  VTWT +I+GY +HG  +EA+ LF +M L  V P+ + ++++LSACS++GLVEE+
Sbjct: 454 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEA 513

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           + YF  +  +  ++P ++HY C++D   R GR+++A + I+    +P+ AIW +L++ CR
Sbjct: 514 EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            HG++EL     + LL L       Y+++ N++     W +  R+RKL + + +  +  R
Sbjct: 574 SHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR 633

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+ +  +++FF   D THP   +++Q+L  + ++ K  +G+       L D +++ K  
Sbjct: 634 SWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK-AIGYEPYQNAELSDSEDDEKPA 692

Query: 618 --SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
             SL+ HSE+LA+ L L    L   PG  +RV KN+ +C DCH  IK  S +     +VR
Sbjct: 693 AGSLKHHSERLAVALGL----LQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVR 748

Query: 676 DATRFHRFEGGVCSCGDY 693
           D+ R H+F+ G CSCGD+
Sbjct: 749 DSKRLHKFKDGRCSCGDF 766



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 219/428 (51%), Gaps = 21/428 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C  +  +D G Q+HG  +K G      + N L  +YAK G ++ A   F ++ 
Sbjct: 182 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 241

Query: 75  ERNVVSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           E+NV++WT ++    ++    +  LSLF  M    V PNEFTL++ +   G    +  G 
Sbjct: 242 EKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 301

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--VL 191
           Q+     K G E N  V NS + +Y + G  +EA R+F+ M   S+ITWNAMI+GY  ++
Sbjct: 302 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 361

Query: 192 AGYSD---------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
               D         + L +FR ++     PD FTF+S L  C ++ ++  G QIH   I 
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           SGF   V  V+  +LV+ Y KCGC+ +A + F  +  ++ ++W+S+I GY+Q     EA+
Sbjct: 422 SGFLSDV--VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           +LF ++R   ++ +     S++   +   LVE+ +       K    ++  V +   ++D
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-EYCIEPVVDHYGCMID 538

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           M+++ G +++A         + N   W+ ++ G   HG  + A     K+L  +++P G+
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL--ELKPKGI 596

Query: 420 -AYLAVLS 426
             Y+ +L+
Sbjct: 597 ETYILLLN 604



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G+      +   L  C  +GS+G    +HG +  +G        +A SLV+ Y++C
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTG--AGADMFVATSLVNAYMRC 126

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G   +ARR+FD + +++V++W++L+ GY      A  +E+F ++ E       + L + +
Sbjct: 127 GAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
                   V+ GKQ+H YA K  +   TS+ NS+  +Y K G +D A   F  +P KNV+
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 246

Query: 385 TWTVIITGYGKHGLAKE-AVGLFRKMLLDDVEPDGVAYLAVLSACSHS---GLVEESQEY 440
           TWT +I+   +     E  + LF  ML+D V P+     +V+S C       L ++ Q +
Sbjct: 247 TWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             ++  +  +  +       +    R G  DEA  L E M    SI  W  ++S
Sbjct: 307 SFKIGCETNLPVKNSTMYLYL----RKGETDEAMRLFEQME-DASIITWNAMIS 355


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/709 (34%), Positives = 372/709 (52%), Gaps = 71/709 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+ +YAK G +  A  VF +M +R+ VSWT ++ G  ++G     +  F  M S    
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC--------- 161
           P++FTL+  + +   + +   G ++H   +K G      V NS++ MY KC         
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404

Query: 162 ----------------------GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
                                 GR+  A  MF+ M  +S+++WN +IAGY   G     L
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMAL 464

Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA---- 254
             F +M     + PD FT TS L AC +L  +  G Q+H +++ +G P S + + A    
Sbjct: 465 KFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIST 524

Query: 255 ---------------------------GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                                       +L++ YVK G   +AR +FD++  + VI+W++
Sbjct: 525 YAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTA 584

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+GY Q     EAMELFR +     + +   L++++   A  A ++ GKQIH  A +  
Sbjct: 585 MIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLF 406
                SVSN+I+ +Y + G +  A  +F+++   K  +TWT +I    +HGL ++AV LF
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +M+   V+PD + Y+ VLSAC+H+G V++ + Y+ ++ N+  + P++ HY+C+VD   R
Sbjct: 705 EEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHAR 764

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG L EA   I+ MPV P   +W +LL+ACRV  + +L       LL +D  N   Y  +
Sbjct: 765 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSAL 824

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           +N+++  G WN+  R+ KL + KG+KK  G SW  V  ++H F   D  HP  + I++  
Sbjct: 825 ANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKA 884

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
            EM + +K+  GFV  +   LHD+ +E KEE L  HSEKLAI       GL   P K  +
Sbjct: 885 AEMWEEIKKA-GFVPDLNSVLHDVDDELKEELLSRHSEKLAIAF-----GLISTPEKTTL 938

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH  IK +SK +    +VRDATRFH F  G CSC DYW
Sbjct: 939 RIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 50/334 (14%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY----VKCGCLVEARR 272
           +   L+ C +  +   G  IH   + +G    V T +  +L+ +Y    V  GC  EAR 
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGL--LVSTYLCNNLLAYYASVGVSRGCFREARC 269

Query: 273 VFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRER------------------- 311
           +FD I   +++  +W+SL+  YA+   L +A  +F ++ +R                   
Sbjct: 270 LFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFW 329

Query: 312 -------SLQVDGFVLS--SMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIV 359
                   +  +GF  S  ++  V +  A +E    G+++H +  K+       V+NS++
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVL 389

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
            MY KCG  + A  +F  M V++V +W V+++ Y   G  + AV +F  M    VE   V
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENM----VERSIV 445

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN---- 475
           ++  +++  + +GL   + ++FSR+ +   M+P     + ++ +      L   K     
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505

Query: 476 -LIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            L   MP   S  I   L+S     G +E  R +
Sbjct: 506 ILRTGMPC--SSQIMNALISTYAKSGSVETARRI 537


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/689 (34%), Positives = 376/689 (54%), Gaps = 51/689 (7%)

Query: 39   VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
            +K G+  D+++ + +++ Y + G ++ A   F+ M ERN  SWT ++  F Q G     +
Sbjct: 388  IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447

Query: 99   SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
             L+ ++   +V     T +  + A   +  ++    I    +      N V  N+II  Y
Sbjct: 448  QLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILNP----NVVAWNAIIAGY 499

Query: 159  SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
            ++ G + EA  +F  MP K+  +W AMIAG+V    S + L L  ++   G +P + +FT
Sbjct: 500  TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559

Query: 219  STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG------------- 265
            S L AC ++G V  G  IH   I +G  ++  + +   L+  Y KCG             
Sbjct: 560  SALSACANIGDVEIGRVIHSLAIKTGCQFN--SYVMNGLISMYAKCGNVEDGSHVFRTIR 617

Query: 266  ------------------CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                               L +AR VF+ + ++ V+SW+++I  Y Q  +   A++LF  
Sbjct: 618  VKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLD 677

Query: 308  LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKC 365
            +  R ++ +   ++S++    +   ++ G+Q HA   K+  G DT   V NS++ MY KC
Sbjct: 678  MLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL--GFDTFLFVGNSLITMYFKC 735

Query: 366  GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
            G  D    +F EMP  +++TW  ++ G  ++GL KEA+ +F +M ++ + PD +++L VL
Sbjct: 736  GYEDGFC-VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVL 794

Query: 426  SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
             ACSH+GLV+E   +F+ +     + P + HY+C+VD LGRAG L EA+ LIE+MPVKP 
Sbjct: 795  CACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPD 854

Query: 486  IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
              IW+ LL ACR+H ++ELG+ V E L ++       YV++SN+ A  G W++   +RKL
Sbjct: 855  SVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKL 914

Query: 546  ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
             + +GL K  G SW++V  ++H F  GD TH   E+I+  L E     +   G++    +
Sbjct: 915  MKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRAT-GYMPDTNF 973

Query: 606  ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
             LHD++EE K+  L  HSEKLA+    V G L+   G  I++ KNLR+CGDCH F+K +S
Sbjct: 974  VLHDVEEEQKQNELLYHSEKLAV----VFGILSTPNGSPIQIIKNLRICGDCHTFMKFMS 1029

Query: 666  KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K+     ++RD  RFH F  G CSCGDYW
Sbjct: 1030 KVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 220/469 (46%), Gaps = 47/469 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  Y  C  M+ A  +FD+M ERN VSW  ++ G++   +      +F +M  +  +
Sbjct: 299 NSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P++      + A   L  +E    +  + +K+G+E + VVG++I++ Y++ G ++ A   
Sbjct: 359 PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ MP ++  +W  MIA +   G  D  + L+ ++ E        T T+ + A   +G +
Sbjct: 419 FETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRI 474

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
                I   ++      +   +IAG     Y + G L EA+ +F  +  K+  SW+++I 
Sbjct: 475 QKARLIFDEILNPNV-VAWNAIIAG-----YTQNGMLKEAKDLFQKMPVKNSASWAAMIA 528

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           G+ Q E   EA+EL  +L            +S +   A+   VE G+ IH+ A K     
Sbjct: 529 GFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQF 588

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           ++ V N ++ MY KCG +++ + +F  + VK+ V+W  +I+G  ++ +  +A  +F KM 
Sbjct: 589 NSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP 648

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
             DV    V++ A++SA   +G  E + + F                   +D L R    
Sbjct: 649 KRDV----VSWTAIISAYVQAGHGEVALDLF-------------------LDMLARG--- 682

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
                      +KP+     +LLSAC   G ++LG +   ++ +L  D 
Sbjct: 683 -----------IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDT 720



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 224/470 (47%), Gaps = 63/470 (13%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+  YAK G +  A  VF+ M ERNVVSW A++ G++QNG+ K    LF +M   +V   
Sbjct: 239 LLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA-- 296

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
                                            WN     S++  Y  C R++EA  +FD
Sbjct: 297 --------------------------------SWN-----SVVTGYCHCYRMSEARELFD 319

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            MP ++ ++W  MI+GYV      +   +F KM      PD+  F   L A   L  +  
Sbjct: 320 QMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLEL 379

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
              +    I +G  Y    V+  ++++ Y + G L  A   F+ + +++  SW+++I  +
Sbjct: 380 IGSLRPIAIKTG--YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAF 437

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           AQ   L +A++L+ ++ E+++       ++MM  +A    +++ + I          L+ 
Sbjct: 438 AQCGRLDDAIQLYERVPEQTVATK----TAMMTAYAQVGRIQKARLI------FDEILNP 487

Query: 353 SVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +V   N+I+  Y + G++ EA +LF +MPVKN  +W  +I G+ ++  ++EA+ L  ++ 
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GR 466
                P   ++ + LSAC++ G VE       R+ +   +K   +  S +++ L     +
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVE-----IGRVIHSLAIKTGCQFNSYVMNGLISMYAK 602

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
            G +++  ++  ++ VK +++ W +L+S    +  L+  R V E + + D
Sbjct: 603 CGNVEDGSHVFRTIRVKDTVS-WNSLISGLSENYMLDDARVVFEKMPKRD 651



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 40/340 (11%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE------ 62
           V        +L  C+    ++ G  +H   +K G  F+  + N LI MYAKCG       
Sbjct: 552 VPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSH 611

Query: 63  -------------------------MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
                                    ++ A  VF+KM +R+VVSWTA++  ++Q G+ +  
Sbjct: 612 VFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVA 671

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           L LF  M +  +KPN+ T+++ + A G L +++ G Q H +  K GF+    VGNS+I M
Sbjct: 672 LDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITM 731

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y KCG   +   +F+ MP   LITWNA++ G    G   + + +F +M+  G +PD+ +F
Sbjct: 732 YFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSF 790

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-- 275
              L AC   G V  G   H   +T  +           +VD   + G L EA  + +  
Sbjct: 791 LGVLCACSHAGLVDEG-WAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENM 849

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            ++  SVI W +L+       N+    EL +++ ER  Q+
Sbjct: 850 PVKPDSVI-WEALLGACRIHRNV----ELGQRVAERLFQM 884



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 184/405 (45%), Gaps = 74/405 (18%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+ I    + GR+ EA R+F+ M  + +++WN+MI GY   G  D+  LLF         
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF--------- 225

Query: 212 PDEF------TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            D F      T+T  L      G +    ++   +           V   +++  YV+ G
Sbjct: 226 -DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERN------VVSWNAMISGYVQNG 278

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-----LQVDGF-- 318
            L  AR++FD + +K+V SW+S++ GY     ++EA ELF Q+ ER+     + + G+  
Sbjct: 279 DLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVH 338

Query: 319 ----------------------------VLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
                                       VLS++ G+  D  L+   + I   A K     
Sbjct: 339 ISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGL-DDLELIGSLRPI---AIKTGYEG 394

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  V ++I++ Y + G +D A   F  MP +N  +WT +I  + + G   +A+ L+ ++ 
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV- 453

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
               E       A+++A +  G +++     +RL  D+ + P +  ++ I+    + G L
Sbjct: 454 ---PEQTVATKTAMMTAYAQVGRIQK-----ARLIFDEILNPNVVAWNAIIAGYTQNGML 505

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            EAK+L + MPVK S A W  +++    +   E  RE  E+L+ L
Sbjct: 506 KEAKDLFQKMPVKNS-ASWAAMIAGFVQN---EESREALELLIEL 546


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/689 (36%), Positives = 372/689 (53%), Gaps = 49/689 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF-------LQNGNAKACL 98
           +L   N L+   A    +     +F  M +R+ VS+ AL+ GF          G  +A L
Sbjct: 75  NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
                +  + V+P+  T+S  + A+  L     G Q+H   M+ GF       + ++DMY
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194

Query: 159 SKCGRINEAARMFDVMPAKSL-------------------------------ITWNAMIA 187
           +K G I +A R+FD M  K++                               ITW  M+ 
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    G   + L +FR+M+  G   D++TF S L ACG+L +   G QIH + I +   Y
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT--LY 312

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  +LVD Y KC  +  A  VF  +  K++ISW+++I+GY Q     EA+ +F +
Sbjct: 313 DGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSE 372

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKC 365
           ++   ++ + F L S++   A+ A +E+G Q H  A  + SGL    +VS+++V +Y KC
Sbjct: 373 MQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMA--LVSGLRPYITVSSALVTLYGKC 430

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G I++A  LF+EMP  + V++T +++GY + G AKE + LF KMLL  V+P+GV ++ VL
Sbjct: 431 GSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVL 490

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACS SGLVE+   YF  +  D  +    +HY+C++D   R+GRL EA+  I  MP  P 
Sbjct: 491 SACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPD 550

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
              W TLLSACR+ GD+E+G+   E LL+ D  NP +YV++ ++HA  G W+E   LR+ 
Sbjct: 551 AIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRG 610

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            R + +KK  G SW++    +H F   D +HP +  I++ L  +  +M EE G+   V  
Sbjct: 611 MRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEE-GYKPDVSS 669

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHD+ +  K   L  HSEKLAI   L+     E P   IRV KNLRVC DCH   K +S
Sbjct: 670 VLHDVADAEKVHMLSNHSEKLAIAFGLIFVP-EEMP---IRVVKNLRVCVDCHNATKFIS 725

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KI     +VRDA RFH+F  G+CSCGD+W
Sbjct: 726 KITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 37/396 (9%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV----------- 79
           G Q+H  ++++GF       + L+DMYAK G +  A  VFD+M+ +NVV           
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227

Query: 80  --------------------SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
                               +WT ++ G  QNG     L +F +M +  V  +++T  + 
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A G L++ E G QIH   +++ ++ N  VG++++DMYSKC  I  A  +F  M  K++
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           I+W AMI GY   G  ++ + +F +MQ  G  P++FT  S + +C +L S+  G Q H  
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407

Query: 240 LITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            + SG  PY     ++ +LV  Y KCG + +A R+FD +     +S+++L+ GYAQ    
Sbjct: 408 ALVSGLRPY---ITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKA 464

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNS 357
            E ++LF ++  + ++ +G     ++   +   LVE+G    H+        L       
Sbjct: 465 KETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTC 524

Query: 358 IVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITG 392
           ++D+Y + G + EA E   +MP   + + W  +++ 
Sbjct: 525 MIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSA 560



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 145/279 (51%), Gaps = 16/279 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C      + G Q+H   ++  +  ++ + + L+DMY+KC  +  A AVF +M  +N+
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTA++ G+ QNG  +  + +F +M +  +KPN+FTL + I +   L+S+E G Q H M
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V ++++ +Y KCG I +A R+FD MP    +++ A+++GY   G + + 
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKET 467

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG-------TQIHGFLITSGFPYSVKT 251
           + LF KM   G  P+  TF   L AC   G V  G        Q HG ++     Y+   
Sbjct: 468 IDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDH-YTC-- 524

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQ-KSVISWSSLI 289
                ++D Y + G L EA      + +    I W++L+
Sbjct: 525 -----MIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLL 558



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 2/181 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + +++ L+ +Y KCG +  A  +FD+M 
Sbjct: 385 LGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMP 444

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VS+TAL+ G+ Q G AK  + LF +M    VKPN  T    + A      VE G  
Sbjct: 445 FHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCS 504

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLA 192
             H M    G          +ID+YS+ GR+ EA      MP     I W  +++   L 
Sbjct: 505 YFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLR 564

Query: 193 G 193
           G
Sbjct: 565 G 565


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/643 (36%), Positives = 372/643 (57%), Gaps = 17/643 (2%)

Query: 62  EMNGACAVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           E      +F++ +++ +V SW +++    ++G++   L  F  M   S+ P   +    I
Sbjct: 24  ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAI 83

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L  + +G Q H      G++ +  V +++I MYS CG++ +A ++FD +P ++++
Sbjct: 84  KACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM--QEHGE----IPDEFTFTSTLKACGSLGSVGGGT 234
           +W +MI GY L G +   + LF+ +  +E+ +      D     S + AC  + + G   
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTE 203

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCG--CLVEARRVFDLIEQKSVISWSSLILGY 292
            IH F+I  GF   V   +  +L+D Y K G   +  AR++FD I  K  +S++S++  Y
Sbjct: 204 SIHSFVIKRGFDRGVS--VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261

Query: 293 AQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           AQ     EA ++FR+L +E+ +  +   LS+++   +    +  GK IH    ++    D
Sbjct: 262 AQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             V  SI+DMY KCG ++ A   F+ M  KNV +WT +I GYG HG A +A+ LF  M+ 
Sbjct: 322 VIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             V P+ + +++VL+ACSH+GL +    +F+ +     ++P +EHY C+VD LGRAG L 
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A +LI+ M ++P   IW +LL+ACR+H ++EL       L  LD  N   Y+++S+I+A
Sbjct: 442 KAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYA 501

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           D+G W + ER+R   +++GL K  G S +E++ E+H F  GD+ HP  EKI++ L E+ +
Sbjct: 502 DSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++ E  G+V       HD+ EE KE +LRVHSEKLAI      G +N  PG  + V KNL
Sbjct: 562 KLLEA-GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF----GIMNTVPGSTVNVVKNL 616

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RVC DCH  IK +SKI+   FVVRDA RFH F+ G CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 225/438 (51%), Gaps = 27/438 (6%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS  L +  G Q H      G+  D+ +++ LI MY+ CG++  
Sbjct: 70  LSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFD++ +RN+VSWT+++ G+  NGNA   +SLF  +    ++ N+   +  + + G+
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LIEENDDDATMFLDSMGM 186

Query: 126 LSSVE-------NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGR--INEAARMFDVM 174
           +S +         G+   IH   +K GF+    VGN+++D Y+K G   +  A ++FD +
Sbjct: 187 VSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGG 233
             K  +++N++++ Y  +G S++   +FR++ +E     +  T ++ L A    G++  G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIG 306

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             IH  +I  G    V  ++  S++D Y KCG +  AR  FD ++ K+V SW+++I GY 
Sbjct: 307 KCIHDQVIRMGLEDDV--IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYG 364

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY-AAKVPSGLDT 352
              + A+A+ELF  + +  ++ +     S++   +   L + G   H + A K   G++ 
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVG--WHWFNAMKGRFGVEP 422

Query: 353 SVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA-VGLFRK 408
            + +   +VD+  + G + +A +L  +M ++ + + W+ ++     H   + A + + R 
Sbjct: 423 GLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARL 482

Query: 409 MLLDDVEPDGVAYLAVLS 426
             LD   P    Y  +LS
Sbjct: 483 FELD---PSNCGYYMLLS 497


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/681 (35%), Positives = 376/681 (55%), Gaps = 16/681 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+ L L  G  +H   V  G    + L+N L  MYA CGEM  A  VFD   E + VSW
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK--ASGVLSSVENGMQIHGMC 139
            +L+ G+++ G  +  L +F  M    +  N F L + IK  ASG          +HG  
Sbjct: 173 NSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------VLAG 193
           +K+G + +  + +++IDMY+K G +  A  +F  +P  ++I +NAMIAG+      V   
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKE 292

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            S + L L+ +MQ  G  P EFTF+S L+AC   G  G G QIHG ++   F       I
Sbjct: 293 VSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSF--HDDDYI 350

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+D Y   GC+ +  R F  + ++ +++W+S+I G  Q E   +A+ LF++     L
Sbjct: 351 GSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGL 410

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D F +SS+M   A  A+   G+QI   A K      T++ NS + M  + G +D  T 
Sbjct: 411 KPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTR 470

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F EM  ++VV+W+ +I+ + +HG A++A+ +F +M+   V P+ V +L VL+ACSH GL
Sbjct: 471 RFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGL 530

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V++   Y+  + N+  + P I+H +C+VD LGRAGRL +A+  I          +W++LL
Sbjct: 531 VDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL 590

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           ++CR+HGD+E G+ V + ++ L+  +  +YV++ N++ DAG  +   + R L + +G+KK
Sbjct: 591 ASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKK 650

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SW+E+   +H F  GD +HP +  I++ L EM  ++ E+L            I   
Sbjct: 651 EPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKI-EKLANTDNASTGSDGIS-S 708

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
           S++  +  HSEK+A+   ++    +      IRV KNLRVC DCH  +K +S       +
Sbjct: 709 SEQNLVGCHSEKIAVAFGMI----HLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREII 764

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           +RD  RFH F GG CSCGDYW
Sbjct: 765 LRDGIRFHHFRGGSCSCGDYW 785



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 240/502 (47%), Gaps = 32/502 (6%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK--CGEMNGACAVFDKML 74
           D LR C+    L +   +H  + +   +  L L N L+  Y +   G    A  + D+M 
Sbjct: 7   DLLRSCTA---LPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMP 63

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGM 133
            RN VS+  L+  + + G     L  F +  +++ ++ + FT +  + A      +  G 
Sbjct: 64  RRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGK 123

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +H M +  G      + NS+  MY+ CG + EA R+FD       ++WN++++GYV AG
Sbjct: 124 AVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAG 183

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG--GTQIHGFLITSGFPYSVKT 251
             ++ L +F  M  HG   + F   S +K C S   VG      +HG ++ +G       
Sbjct: 184 AREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGL--DADL 241

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA------EAMELF 305
            +A +++D Y K G L  A  +F  +   +VI ++++I G+ ++E         EA+ L+
Sbjct: 242 FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLY 301

Query: 306 RQLRERSLQVDGFVLSSMM---GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            +++ R +Q   F  SS++    +  +F     GKQIH    K     D  + ++++D+Y
Sbjct: 302 SEMQSRGMQPSEFTFSSILRACNLAGEFGF---GKQIHGQVLKHSFHDDDYIGSALIDLY 358

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
              G +++    F  +P +++VTWT +I+G  ++ L ++A+ LF++ +   ++PD     
Sbjct: 359 SDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMS 418

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIE 478
           +V++AC+ S  V  + E    L     +K     ++ + +S      R+G +D      +
Sbjct: 419 SVMNACA-SLAVARTGEQIQCLA----IKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQ 473

Query: 479 SMPVKPSIAIWQTLLSACRVHG 500
            M  +  ++ W  ++S+   HG
Sbjct: 474 EMESRDVVS-WSAVISSHAQHG 494


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/631 (35%), Positives = 364/631 (57%), Gaps = 9/631 (1%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASG 124
           A +VF    E +V++W +++  F+ +   +  L  + +M   S   P+ FT  + +K   
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           +L   + G  +HG  +K     +  +  ++++MY+ CG +  A  +F+ M  ++ + W +
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI+GY+     ++ LLL++KM+E G  PDE T  + + AC  L  +G G ++H  +    
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI--RE 208

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               +  V+  +LV+ Y KCG L  AR+VFD +  K V +WS+LI GY +     EA++L
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL 268

Query: 305 FRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           FR++   S ++ +   + +++   A    +E G+ +H Y  +   G   S++NS++DM+ 
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG ID A  +F+ M  K++++W  ++ G+  HGL +EA+  FR M   D++PD + ++ 
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIG 388

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VL+ACSH+GLV+E ++ F  +     ++ + EHY C+VD L RAG L EA+  I  MP++
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P  AIW ++L ACRV+ +LELG E    LL+L+  N   Y+++SNI+A    WNE +++R
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVR 508

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
           +L   KG++K  G S V +D   H F  GD +HP   +I  +L ++ +++K   G+V   
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLA-GYVADT 567

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
              L +I +  KEES+  HSEK    LAL  G L  + G  I + KNLRVC DCH  IK 
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEK----LALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKL 623

Query: 664 LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +SKI +    +RD  RFH F+ G CSC DYW
Sbjct: 624 VSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 216/422 (51%), Gaps = 15/422 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           V +R      L+ C+  L    G  LHG +VK     DL +   L++MYA CG++  A  
Sbjct: 76  VPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARF 135

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F++M  RN V WT+++ G+++N      L L+ +M      P+E T++T + A   L  
Sbjct: 136 LFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD 195

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +  GM++H    +   +   V+G+++++MY+KCG +  A ++FD +  K +  W+A+I G
Sbjct: 196 LGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFG 255

Query: 189 YVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           YV    S + L LFR++     + P+E T  + + AC  LG +  G  +H ++  +   +
Sbjct: 256 YVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGH 315

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           SV   +  SL+D + KCG +  A+R+FD +  K +ISW+S++ G+A      EA+  FR 
Sbjct: 316 SVS--LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRL 373

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           ++   LQ D      ++   +   LV++GK++ +   A     L +     +VD+  + G
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVEP--DGVA 420
           L+ EA E    MP++ +   W  ++     Y    L +EA     K+     EP  DGV 
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKL-----EPTNDGVY 488

Query: 421 YL 422
            L
Sbjct: 489 IL 490


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/697 (35%), Positives = 380/697 (54%), Gaps = 43/697 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K+G        + LI+         G   A +VF  + E N++ W  +  G   
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     + + G QIHG  +K G + +  V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I MY + GR                               I  A ++FD +P K +
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+GY   G   + L LF+ M +    PDE T  + + AC   GS+  G Q+H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y KCG L  A  +F+ +  K VISW++LI GY       
Sbjct: 292 IDDHGFGSNLK--IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNS 357
           EA+ LF+++       +   + S++   A    ++ G+ IH Y  K   G+   +S+  S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++FN +  K++ +W  +I G+  HG A  +  LF +M    ++PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D +M P++EHY C++D LG +G   EA+ +I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             M ++P   IW +LL AC++HG++ELG    E L++++ +NP +YV++SNI+A AG WN
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  + R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  + E+ 
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL-EKA 648

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 704

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   + RD TRFH F  GVCSC DYW
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 228/500 (45%), Gaps = 66/500 (13%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K+     G Q+HG ++K+G   DL ++  LI MY + G +
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185

Query: 64  NGACAVFDKMLERNVVS-------------------------------WTALMCGFLQNG 92
             A  VFDK   R+VVS                               W A++ G+ + G
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 245

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L LF  M  ++V+P+E T+ T + A     S+E G Q+H      GF  N  + N
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++ID+YSKCG +  A  +F+ +P K +I+WN +I GY       + LLLF++M   GE P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ I  KS+ SW+++I G+A       + +LF ++R+  +Q D      ++   +   +
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G+ I                                T+ +   P   +  +  +I  
Sbjct: 486 LDLGRHI----------------------------FRTMTQDYKMTP--KLEHYGCMIDL 515

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
            G  GL KEA      + + ++EPDGV + ++L AC   G VE  + +   L   +   P
Sbjct: 516 LGHSGLFKEAE---EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 572

Query: 453 RIEHYSCIVDSLGRAGRLDE 472
               Y  + +    AGR +E
Sbjct: 573 --GSYVLLSNIYASAGRWNE 590


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/662 (34%), Positives = 365/662 (55%), Gaps = 7/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            +H  L+++    D  L N ++      G  N +  VF ++ E N+  W  ++ G +   
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + L+  M      PN FT+   +KA      V  G++IH + +K+G++ +  V  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++ +Y KC   ++A ++FD +P K++++W A+I GY+ +G+  + +  F+K+ E G  P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F+    L AC  LG    G  I  ++  SG   +V   +A SL+D YVKCG L  A  
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV--FVATSLLDMYVKCGNLERANL 271

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  + +K ++SWS++I GYA      +A++LF Q++  +L+ D + +  ++   A    
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G    +   +     +  +  +++DMY KCG + +A E+F  M  K+ V W  ++ G
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVG 391

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
              +G AK    LF  +    + PD   ++ +L  C+H G V E +++F+ +     + P
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            IEHY C+VD LGRAG L+EA  LI +MP+KP+  +W  LL  C++H D  L  +V + L
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           + L+  N  NYV +SNI++    W E E++R   + + ++K+   SW+E+D  +H F  G
Sbjct: 512 IELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVG 571

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +H L+EKI+  L E+ + +K  +G V   ++ L DI+EE KE  L  HSEKLA+   L
Sbjct: 572 DKSHWLSEKIYAKLDELGRELK-AVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGL 630

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +       P  VIRV KNLRVCGDCH+ IK +SKI K   ++RD  RFH F  G CSC D
Sbjct: 631 IA----SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRD 686

Query: 693 YW 694
           YW
Sbjct: 687 YW 688



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 206/401 (51%), Gaps = 8/401 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++ L +  G+++H  LVK G+  D+ +   L+ +Y KC   + A  VFD + ++NV
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G++ +G+ +  +  F ++    +KP+ F+L   + A   L    +G  I   
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              SG   N  V  S++DMY KCG +  A  +F  MP K +++W+ MI GY   G   + 
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +MQ     PD +T    L AC +LG++  G      +  + F  +   V+  +L+
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN--PVLGTALI 358

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG + +A  +F  +++K  + W+++++G +   +      LF  + +  ++ D  
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++        V +G+Q      +V S L  S+ +   +VD+  + GL++EA +L N
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFS-LTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            MP+K N V W  ++ G   H     A  + +K++  ++EP
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI--ELEP 516


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/677 (33%), Positives = 372/677 (54%), Gaps = 11/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G  LHG +VK G   ++ + N L+ MY++ G+   A  VF KM ER++
Sbjct: 268 LPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDL 327

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW ++M   + NGN    L L  +M  +    N  T +T + A   L +++    +H  
Sbjct: 328 ISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK---IVHAF 384

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +  G   N ++GN+++ MY K G +  A R+  +MP +  +TWNA+I G+      +  
Sbjct: 385 VILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAA 444

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSL 257
           +  F  ++E G   +  T  + L A  S   +   G  IH  ++ +GF   ++T +  SL
Sbjct: 445 IEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGF--ELETFVQSSL 502

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y +CG L  +  +FD++  K+  +W++++   A      EA++L  ++R   + +D 
Sbjct: 503 ITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQ 562

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F  S    +  +  L+++G+Q+H+   K     +  V N+ +DMY KCG ID+   +  +
Sbjct: 563 FSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQ 622

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              ++  +W ++I+   +HG  ++A   F +ML   + PD V ++++LSACSH GLV+E 
Sbjct: 623 PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEG 682

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             YFS +     +   IEH  CI+D LGRAG+L EA+N I  MPV P+  +W++LL+AC+
Sbjct: 683 LAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACK 742

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG+LEL R+  + L  LD  +   YV+ SN+ A    W + E +RK   S  +KK    
Sbjct: 743 IHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPAC 802

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SWV++  ++  F  GD  HP   +I+  L E++K ++E  G++    Y+L D  EE KE 
Sbjct: 803 SWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREA-GYMPDTSYSLQDTDEEQKEH 861

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L  HSE++A+   L+    N   G  +R+FKNLRVCGDCH   K +S+I+    ++RDA
Sbjct: 862 NLWNHSERIALAFGLI----NSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDA 917

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F  G CSC DYW
Sbjct: 918 YRFHHFSSGKCSCSDYW 934



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 259/510 (50%), Gaps = 24/510 (4%)

Query: 15  LADSLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           +A  +R C   +L+D   G Q+ G+++K G    + + N LI M+  C  +  A  VFD 
Sbjct: 163 MATVIRSCG--VLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDD 220

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M ER+ +SW +++   + NG+ +  L  F QM  +  K +  T+S  +   G   ++  G
Sbjct: 221 MKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWG 280

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             +HGM +KSG E N  V NS++ MYS+ G+  +A  +F  M  + LI+WN+M+A +V  
Sbjct: 281 RGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDN 340

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G   + L L  +M +  +  +  TFT+ L AC +L ++     +H F+I  G  +++  +
Sbjct: 341 GNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNL--I 395

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           I  +LV  Y K G +  A+RV  ++  +  ++W++LI G+A  +    A+E F  LRE  
Sbjct: 396 IGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG 455

Query: 313 LQVDGFVLSSMMGVF-ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           + V+   + +++  F +   L++ G  IHA+       L+T V +S++ MY +CG ++ +
Sbjct: 456 VPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTS 515

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ +  KN  TW  I++    +G  +EA+ L  KM  D +  D  ++    +   + 
Sbjct: 516 NYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNL 575

Query: 432 GLVEESQEYFSRL------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            L++E Q+  S +       ND  +   ++ Y       G+ G +D+   ++   P   S
Sbjct: 576 TLLDEGQQLHSLIIKHGFESNDYVLNATMDMY-------GKCGEIDDVFRILPQ-PRSRS 627

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRL 515
              W  L+SA   HG  +  RE    +L L
Sbjct: 628 QRSWNILISALARHGFFQQAREAFHEMLDL 657



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 237/481 (49%), Gaps = 22/481 (4%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY+K G +  A  VFDKM ERN  SW  LM GF++ G  +  +  FC M    V+P+ + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 116 LSTNIKA---SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            ++ + A   SG ++  E   Q+H   +K G   +  VG S++  Y   G + E   +F 
Sbjct: 61  AASLVTACDRSGCMT--EGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            +   ++++W +++ GY   G   + + ++R+++  G   +E    + +++CG L     
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G Q+ G +I SG   +V   +A SL+  +  C  + EA  VFD ++++  ISW+S+I   
Sbjct: 179 GYQVLGSVIKSGLDTTVS--VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITAS 236

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
               +  +++E F Q+R    + D   +S+++ V      +  G+ +H    K  SGL++
Sbjct: 237 VHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVK--SGLES 294

Query: 353 S--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +  V NS++ MY + G  ++A  +F++M  +++++W  ++  +  +G    A+ L  +ML
Sbjct: 295 NVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEML 354

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
                 + V +   LSAC +   ++    +   L     +   +   + +V   G+ G +
Sbjct: 355 QTRKATNYVTFTTALSACYNLETLKIVHAFVILL----GLHHNLIIGNALVTMYGKFGSM 410

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI--LLRLDGDNPVNYVMMSN 528
             A+ + + MP +  +  W  L+     H D +      E   LLR +G  PVNY+ + N
Sbjct: 411 AAAQRVCKIMPDRDEVT-WNALIGG---HADNKEPNAAIEAFNLLREEG-VPVNYITIVN 465

Query: 529 I 529
           +
Sbjct: 466 L 466



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 241/500 (48%), Gaps = 13/500 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     + +   Q+H  ++K G + D+ +   L+  Y   G +     VF ++ E N+VS
Sbjct: 68  CDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVS 127

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM G+  NG  K  +S++ ++    V  NE  ++T I++ GVL     G Q+ G  +
Sbjct: 128 WTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVI 187

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           KSG +    V NS+I M+  C  I EA+ +FD M  +  I+WN++I   V  G+ +K L 
Sbjct: 188 KSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLE 247

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
            F +M+      D  T ++ L  CGS  ++  G  +HG ++ SG   +V   +  SL+  
Sbjct: 248 YFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNV--CVCNSLLSM 305

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y + G   +A  VF  + ++ +ISW+S++  +    N   A+EL  ++ +     +    
Sbjct: 306 YSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTF 365

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++ +    +   +E  K +HA+   +    +  + N++V MY K G +  A  +   MP 
Sbjct: 366 TTALSACYN---LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPD 422

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA-CSHSGLVEESQE 439
           ++ VTW  +I G+  +     A+  F  +  + V  + +  + +LSA  S   L++    
Sbjct: 423 RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMP 482

Query: 440 YFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
             + +      ++  ++  S ++    + G L+ +  + + +  K S + W  +LSA   
Sbjct: 483 IHAHIVVAGFELETFVQ--SSLITMYAQCGDLNTSNYIFDVLANKNS-STWNAILSANAH 539

Query: 499 HGDLELGREVGEILLRLDGD 518
           +G    G E  ++++++  D
Sbjct: 540 YGP---GEEALKLIIKMRND 556


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/617 (36%), Positives = 352/617 (57%), Gaps = 39/617 (6%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG------- 162
           +P+    ST I A     ++E G ++H     S F     + N ++DMY+KCG       
Sbjct: 84  RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQM 143

Query: 163 ------------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                                   R+ +A ++FD MP +   +WNA I+GYV      + 
Sbjct: 144 LFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREA 203

Query: 199 LLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           L LFR MQ H     ++FT +S L A  ++  +  G +IHG+LI +    ++  V+  +L
Sbjct: 204 LELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTEL--NLDEVVWSAL 261

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L EAR +FD ++ + V+SW+++I    ++    E   LFR L +  ++ + 
Sbjct: 262 LDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNE 321

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           +  + ++   AD A    GK++H Y         +   +++V MY KCG    A  +FNE
Sbjct: 322 YTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNE 381

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M   ++V+WT +I GY ++G   EA+  F  +L    +PD V Y+ VLSAC+H+GLV++ 
Sbjct: 382 MHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKG 441

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            EYF  +     +    +HY+C++D L R+GR  EA+N+I++MPVKP   +W +LL  CR
Sbjct: 442 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCR 501

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG+LEL +   + L  ++ +NP  Y+ ++NI+A+AG W+E   +RK   + G+ K  G+
Sbjct: 502 IHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGK 561

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+E+ +++H F  GD +HP T  IH+ L E+ K++KEE G+V    + LHD++EE KE+
Sbjct: 562 SWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEE-GYVPDTNFVLHDVEEEQKEQ 620

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L  HSEKLA+    V G ++  PG  I+VFKNLR C DCH  IK +SKI++    VRD+
Sbjct: 621 NLVYHSEKLAV----VFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDS 676

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH FE G CSC DYW
Sbjct: 677 NRFHCFEDGSCSCKDYW 693



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 224/454 (49%), Gaps = 47/454 (10%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C ++  L+ G ++H       F   + ++N L+DMYAKCG +  A  +FD+M  R++ SW
Sbjct: 97  CVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSW 156

Query: 82  TALMCGFLQNGNAKACLSLFCQMGS--------------SSVKP---------------- 111
             ++ G+ + G  +    LF +M                +  +P                
Sbjct: 157 NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERS 216

Query: 112 --NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             N+FTLS+ + AS  +  +  G +IHG  +++    + VV ++++D+Y KCG ++EA  
Sbjct: 217 SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG 276

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD M  + +++W  MI      G  ++G LLFR + + G  P+E+TF   L AC    +
Sbjct: 277 IFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
              G ++HG+++ +G  Y   +    +LV  Y KCG    ARRVF+ + Q  ++SW+SLI
Sbjct: 337 EHLGKEVHGYMMHAG--YDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLI 394

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
           +GYAQ     EA+  F  L +   + D      ++       LV++G + + ++ K   G
Sbjct: 395 VGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLE-YFHSIKEKHG 453

Query: 350 LDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG---LAKEAV 403
           L  +  +   ++D+  + G   EA  + + MPVK +   W  ++ G   HG   LAK A 
Sbjct: 454 LMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAA 513

Query: 404 GLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEE 436
                  L ++EP+  A Y+ + +  +++GL  E
Sbjct: 514 K-----ALYEIEPENPATYITLANIYANAGLWSE 542



 Score = 39.7 bits (91), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 28/48 (58%)

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           VD L +  R+ EA  L+     +PS  ++ TL++AC  H  LELGR V
Sbjct: 62  VDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRV 109


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/662 (34%), Positives = 365/662 (55%), Gaps = 7/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            +H  L+++    D  L N ++      G  N +  VF ++ E N+  W  ++ G +   
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + L+  M      PN FT+   +KA      V  G++IH + +K+G++ +  V  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++ +Y KC   ++A ++FD +P K++++W A+I GY+ +G+  + +  F+K+ E G  P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F+    L AC  LG    G  I  ++  SG   +V   +A SL+D YVKCG L  A  
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNV--FVATSLLDMYVKCGNLERANL 271

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  + +K ++SWS++I GYA      +A++LF Q++  +L+ D + +  ++   A    
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G    +   +     +  +  +++DMY KCG + +A E+F  M  K+ V W  ++ G
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVG 391

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
              +G AK    LF  +    + PD   ++ +L  C+H G V E +++F+ +     + P
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            IEHY C+VD LGRAG L+EA  LI +MP+KP+  +W  LL  C++H D  L  +V + L
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           + L+  N  NYV +SNI++    W E E++R   + + ++K+   SW+E+D  +H F  G
Sbjct: 512 IELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVG 571

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +H L+EKI+  L E+ + +K  +G V   ++ L DI+EE KE  L  HSEKLA+   L
Sbjct: 572 DKSHWLSEKIYAKLDELGRELK-AVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGL 630

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +       P  VIRV KNLRVCGDCH+ IK +SKI K   ++RD  RFH F  G CSC D
Sbjct: 631 IA----SPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRD 686

Query: 693 YW 694
           YW
Sbjct: 687 YW 688



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 206/401 (51%), Gaps = 8/401 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++ L +  G+++H  LVK G+  D+ +   L+ +Y KC   + A  VFD + ++NV
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G++ +G+ +  +  F ++    +KP+ F+L   + A   L    +G  I   
Sbjct: 181 VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRY 240

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              SG   N  V  S++DMY KCG +  A  +F  MP K +++W+ MI GY   G   + 
Sbjct: 241 ISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +MQ     PD +T    L AC +LG++  G      +  + F  +   V+  +L+
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSN--PVLGTALI 358

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG + +A  +F  +++K  + W+++++G +   +      LF  + +  ++ D  
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++        V +G+Q      +V S L  S+ +   +VD+  + GL++EA +L N
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFS-LTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            MP+K N V W  ++ G   H     A  + +K++  ++EP
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI--ELEP 516


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/697 (34%), Positives = 386/697 (55%), Gaps = 43/697 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + LI+        +G   A +VF+ + E N++ W  +  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     +   G QIHG  +K G++ +  V
Sbjct: 81  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140

Query: 151 GNSIIDMYSKCGRINE-------------------------------AARMFDVMPAKSL 179
             S+I MY + GR+ +                               A +MFD +P K +
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+GY   G + + L LF++M +    PDE T  S + AC    S+  G Q+H +
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y+KCG +  A  +F+ +  K VISW++LI GY       
Sbjct: 261 IDDHGFGSNLK--IVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           EA+ LF+++       +   + S++   A    +E G+ IH Y  K   G+  + S+  S
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++F+ +  +++ +W  +I G+  HG A  A  +F +M  +++EPD
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 438

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D ++ P++EHY C++D LG +G   EA+ +I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            +M ++P   IW +LL AC+++ ++ELG    + L++++  NP +YV++SNI+A AG WN
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 558

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  ++R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  ++E  
Sbjct: 559 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEA- 617

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 673

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   + RD TRFH F  GVCSC DYW
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 231/494 (46%), Gaps = 76/494 (15%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD------- 71
           L+ C+K+     G Q+HG ++K+G+  DL ++  LI MY + G +  A  VFD       
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169

Query: 72  --------------------KMLE----RNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
                               KM +    ++VVSW A++ G+ + GN K  L LF +M  +
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           +V+P+E T+ + + A    +S+E G Q+H      GF  N  + N++ID+Y KCG +  A
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ +  K +I+WN +I GY       + LLLF++M   GE P++ T  S L AC  L
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G  IH ++       +  +    SL+D Y KCG +  A++VFD I  +S+ SW++
Sbjct: 350 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 409

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I G+A       A ++F ++R+  ++ D            D   V              
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNEIEPD------------DITFV-------------- 443

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-----WTVIITGYGKHGLAKEA 402
            GL ++ S+S        G++D    +F  M     +T     +  +I   G  GL KEA
Sbjct: 444 -GLLSACSHS--------GMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
             +   M   ++EPDGV + ++L AC     VE  + Y   L   +   P    Y  + +
Sbjct: 495 EEMINTM---EMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNP--GSYVLLSN 549

Query: 463 SLGRAGRLDEAKNL 476
               AGR +E   +
Sbjct: 550 IYATAGRWNEVAKI 563


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/678 (34%), Positives = 381/678 (56%), Gaps = 29/678 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG + K G S D+ +   L++ Y +C     A  +FD M ERNVV+WTAL+ G+  N  
Sbjct: 100 VHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               L +F +M      P+ +TL   + A      V+ G Q+HG  +K G E    +GNS
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK-----GLLLFRKMQEH 208
           +  +Y+K G ++ A R F  +P K++ITW  MI+    A   D+     G+ LF  M   
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS----ACAEDEECVELGMSLFIDMLMD 275

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G +P+EFT TS +  CG+   +  G Q+  F    G   ++   +  S +  Y++ G   
Sbjct: 276 GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLP--VKNSTMYLYLRKGETD 333

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLRERSLQVDG 317
           EA R+F+ +E  S+I+W+++I GYAQ  + A           +A+ +FR L+   ++ D 
Sbjct: 334 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDL 393

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F  SS++ V +    +EQG+QIHA   K     D  V++++V+MY KCG I +A + F E
Sbjct: 394 FTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLE 453

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP +  VTWT +I+GY +HG  +EA+ LF +M L  V P+ + ++++LSACS++GLVEE+
Sbjct: 454 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEA 513

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           + YF  +  +  ++P ++HY C++D   R GR+++A + I+    +P+ AIW +L++ CR
Sbjct: 514 EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            HG++EL     + LL L       Y+++ N++     W +  R+RKL + + +  +  R
Sbjct: 574 SHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR 633

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+ +  +++FF   D THP   +++Q+L  + ++ K  +G+       L D +++ K  
Sbjct: 634 SWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAK-AIGYEPYQNAELSDSEDDEKPA 692

Query: 618 --SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
             SL+ HSE+LA+ L L    L   PG  +RV KN+ +C DCH  IK  S +     +VR
Sbjct: 693 AGSLKHHSERLAVALGL----LQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVR 748

Query: 676 DATRFHRFEGGVCSCGDY 693
           D+ R H+F+ G CSCGD+
Sbjct: 749 DSKRLHKFKDGRCSCGDF 766



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 219/428 (51%), Gaps = 21/428 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C  +  +D G Q+HG  +K G      + N L  +YAK G ++ A   F ++ 
Sbjct: 182 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 241

Query: 75  ERNVVSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           E+NV++WT ++    ++    +  +SLF  M    V PNEFTL++ +   G    +  G 
Sbjct: 242 EKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 301

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--VL 191
           Q+     K G E N  V NS + +Y + G  +EA R+F+ M   S+ITWNAMI+GY  ++
Sbjct: 302 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 361

Query: 192 AGYSD---------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
               D         + L +FR ++     PD FTF+S L  C ++ ++  G QIH   I 
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           SGF   V  V+  +LV+ Y KCGC+ +A + F  +  ++ ++W+S+I GY+Q     EA+
Sbjct: 422 SGFLSDV--VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           +LF ++R   ++ +     S++   +   LVE+ +       K    ++  V +   ++D
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-EYCIEPVVDHYGCMID 538

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           M+++ G +++A         + N   W+ ++ G   HG  + A     K+L  +++P G+
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL--ELKPKGI 596

Query: 420 -AYLAVLS 426
             Y+ +L+
Sbjct: 597 ETYILLLN 604



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 11/294 (3%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G+      +   L  C   GS+G    +HG +  +G   S    +A SLV+ Y++C
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTG--ASADMFVATSLVNAYMRC 126

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
               +ARR+FD + +++V++W++L+ GY      A  +E+F ++ E       + L + +
Sbjct: 127 SAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
                   V+ GKQ+H YA K  +   TS+ NS+  +Y K G +D A   F  +P KNV+
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 246

Query: 385 TWTVIITGYGKHGLAKE-AVGLFRKMLLDDVEPDGVAYLAVLSACSHS---GLVEESQEY 440
           TWT +I+   +     E  + LF  ML+D V P+     +V+S C       L ++ Q +
Sbjct: 247 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             ++  +  +  +       +    R G  DEA  L E M    SI  W  ++S
Sbjct: 307 SFKIGCETNLPVKNSTMYLYL----RKGETDEAMRLFEQME-DASIITWNAMIS 355



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 17/226 (7%)

Query: 312 SLQVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           ++  +G  + S M V      VE G     + +H + AK  +  D  V+ S+V+ Y++C 
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCS 127

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              +A  LF+ MP +NVVTWT ++TGY  +      + +F +ML     P      A L+
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPV 482
           AC  S  V+       +  +   +K   E  + + +SL     + G LD A      +P 
Sbjct: 188 ACLASCDVD-----LGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE 242

Query: 483 KPSIAIWQTLLSACRVHGD-LELGREVGEILLRLDGDNPVNYVMMS 527
           K ++  W T++SAC    + +ELG  +  I + +DG  P  + + S
Sbjct: 243 K-NVITWTTMISACAEDEECVELGMSLF-IDMLMDGVMPNEFTLTS 286


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 364/683 (53%), Gaps = 27/683 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C K   L  G  +H  L +   +    + N L+ MY  CG       VFD+ML +N+VSW
Sbjct: 97  CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSW 156

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             ++  + +NG  +  + LF  M +S ++PN     + +++    S +E G QIH   ++
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR 216

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +    N  V  +I +MY +CG +  A  +FD M A++ +TW  ++ GY  A   +  L L
Sbjct: 217 AQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +M   G   DEF F+  LK C  L     G QIH  ++  G    V   +   LVDFY
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVS--VGTPLVDFY 334

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
           VKCG +  A R F  I + + +SWS+LI G++Q   L + +++F  LR   + ++ F+ +
Sbjct: 335 VKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYT 394

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMP 379
           S+    A  A +  G Q H  A K   GL + +   +++V MY KCG +D A   F  + 
Sbjct: 395 SVFQACAAQANLNMGSQAHGDAIK--RGLVSYLYGESAMVTMYSKCGRLDYARRAFESID 452

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             + V WT II+GY  HG A EA+G FR+M    V P+ V ++AVL+ACSHSGLV E+++
Sbjct: 453 EPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           Y   +  D  +KP I+HY C++D+  RAG L EA  LI  MP +P    W++LL  C  H
Sbjct: 513 YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAH 572

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            DL+LG+   E L RLD  +   Y+++ N+++  G W E   +RKL   + LKK    SW
Sbjct: 573 CDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSW 632

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE------ 613
           + V  ++H F  GD  HP TE I+  L E +  +         +   +  + EE      
Sbjct: 633 ISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSV---------IDSPVRLLNEEDDVSCS 683

Query: 614 --SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
             +++E L  HSEKLAI   L+    + +    I VFKNLR C DCHEF K +S +    
Sbjct: 684 LSARKEQLLDHSEKLAIAFGLI----STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQ 739

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            VVRD+TRFH F+ G CSC DYW
Sbjct: 740 IVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 224/444 (50%), Gaps = 18/444 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C     L+ G Q+H  +++   + ++ +   + +MY +CG + GA  VFD M  +N 
Sbjct: 195 LQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT LM G+ Q    +  L LF +M    V+ +EF  S  +K    L   + G QIH  
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSH 314

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    VG  ++D Y KCG I  A R F  +   + ++W+A+I+G+  +G  +  
Sbjct: 315 IVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDC 374

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F  ++  G + + F +TS  +AC +  ++  G+Q HG  I  G    +      ++V
Sbjct: 375 IKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG--ESAMV 432

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG L  ARR F+ I++   ++W+++I GYA   N AEA+  FR+++   ++ +  
Sbjct: 433 TMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAV 492

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFN 376
              +++   +   LV + KQ     ++   G+  ++   + ++D Y + GL+ EA EL N
Sbjct: 493 TFIAVLTACSHSGLVAEAKQYLGSMSR-DYGVKPTIDHYDCMIDTYSRAGLLQEALELIN 551

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAK----EAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
            MP + + ++W  ++ G   H   K     A  LFR      ++P D   Y+ + +  S 
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFR------LDPGDTAGYILLFNLYSA 605

Query: 431 SGLVEESQEYFSRLCNDKRMKPRI 454
            G  EE+  +  +L  ++ +K  +
Sbjct: 606 FGKWEEAG-HVRKLMAERELKKEV 628



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 205/413 (49%), Gaps = 6/413 (1%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G  K       +M  + V     +     +A G L S+ +G  IH    ++    +  
Sbjct: 64  KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + N ++ MY  CG   +  ++FD M  K+L++W  +I+ Y   G  +K + LF  MQ  G
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+   + S L++C     +  G QIH  +I +    ++   +  ++ + YV+CG L  
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANI--TVETAICNMYVRCGWLEG 241

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A+ VFD ++ ++ ++W+ L++GY Q + L  A+ELF ++    +++D FV S ++ V   
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               + G+QIH++  K+ +  + SV   +VD Y+KCG I+ A   F  +   N V+W+ +
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCNDK 448
           I+G+ + G  ++ + +F  +  + V  +   Y +V  AC + + L   SQ +   +   +
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAI--KR 419

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            +   +   S +V    + GRLD A+   ES+  +P    W  ++S    HG+
Sbjct: 420 GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH---AYAAK 345
           ++  +++  L EA +  +++ +  + V       +         +  G+ IH       K
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
            PSG   S+ N ++ MY  CG   +  ++F+EM +KN+V+W ++I+ Y K+G  ++A+ L
Sbjct: 119 NPSG---SIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M    + P+   Y+++L +C     +E  ++  S +    ++   I   + I +   
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR-AQLNANITVETAICNMYV 234

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           R G L+ AK + + M  + ++  W  L+        LE+  E+
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVT-WTGLMVGYTQAKKLEVALEL 276


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/697 (35%), Positives = 378/697 (54%), Gaps = 44/697 (6%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQN 91
           H  +VK G        + L+++       +G   A +VF+   E N++ W  ++ G   +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
            +  + L ++ +M S    PN +T    +K+     + E G QIH   MK G E +    
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 152 NSIIDMYSKCGRINEAARMFD------VMPAKSLIT------------------------ 181
            S+I MY++ GR+ +A ++FD      V+   +LIT                        
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 182 -WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WNAMI GYV     ++ L LF++M      PDE T  S L AC   GS+  G +IH  +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 241 ITS-GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
               GF  S+K  I  + +  Y KCG +  A  +F+ +  K V+SW++LI GY       
Sbjct: 242 DDHHGFGSSLK--IVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNS 357
           EA+ LF+++       +   + S++   A    ++ G+ IH Y  K   G+   +++  S
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++FN M  K++ +W  +I G+  HG A  A  LF +M  + +EPD
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            +  + +LSACSHSGL++  +  F  +  D  + P++EHY C++D LG AG   EA+ +I
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEII 479

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             MP++P   IW +LL AC++HG+LEL     + L+ ++ +N  +YV++SNI+A AG W 
Sbjct: 480 HMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWE 539

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           +  R+R++   KG+KKV G S +E+D  +H F  GD  HP + +I+++L EM+  + EE 
Sbjct: 540 DVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLL-EEA 598

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + V KNLRVC +C
Sbjct: 599 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTVVKNLRVCRNC 654

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   V RD TRFH F  GVCSC DYW
Sbjct: 655 HEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 227/472 (48%), Gaps = 46/472 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+K+   + G Q+H  ++K+G   D   +  LI MYA+ G +  A  VFD   +R+V
Sbjct: 90  LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149

Query: 79  VS-------------------------------WTALMCGFLQNGNAKACLSLFCQMGSS 107
           VS                               W A++ G+++N   +  L LF +M  +
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMC-MKSGFEWNPVVGNSIIDMYSKCGRINE 166
           +V+P+E TL + + A     S+E G +IH +     GF  +  + N+ I +YSKCG +  
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A+ +F+ +  K +++WN +I GY       + LLLF++M   GE P++ T  S L AC  
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 329

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           LG++  G  IH ++       +  + +  SL+D Y KCG +  A +VF+ +  KS+ SW+
Sbjct: 330 LGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I G+A       A +LF ++R+  ++ D   L  ++   +   L++ G+ I     + 
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ- 448

Query: 347 PSGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLA 399
               D +++  +      +D+    GL  EA E+ + MP++ + V W  ++     HG  
Sbjct: 449 ----DYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNL 504

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           + A    +K++  ++EP+      +LS    +    E       + N K MK
Sbjct: 505 ELAESFAQKLM--EIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMK 554



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 148/302 (49%), Gaps = 9/302 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALV--KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           L   L  C+++  ++ G ++H  LV    GF   L + N  I +Y+KCG++  A  +F+ 
Sbjct: 218 LVSVLSACAQSGSIELGREIH-TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEG 276

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           +  ++VVSW  L+ G+      K  L LF +M  S   PN+ T+ + + A   L +++ G
Sbjct: 277 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 336

Query: 133 MQIHGMCMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
             IH    K   G      +  S+IDMY+KCG I  A ++F+ M  KSL +WNAMI G+ 
Sbjct: 337 RWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFA 396

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
           + G ++    LF +M+++G  PD+ T    L AC   G +  G  I    +T  +  + K
Sbjct: 397 MHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS-VTQDYNITPK 455

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               G ++D     G   EA  +  +  +E   VI W SL+       NL  A    ++L
Sbjct: 456 LEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI-WCSLLKACKMHGNLELAESFAQKL 514

Query: 309 RE 310
            E
Sbjct: 515 ME 516


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/670 (35%), Positives = 381/670 (56%), Gaps = 14/670 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G ++H  ++K+GF  D+ + N LI +Y K G    A  VF++M ER++VSW +++ G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +L  G+  + L LF +M     KP+ F+  + + A   + S + G +IH   ++S  E  
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265

Query: 148 PV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            V V  SI+DMYSK G ++ A R+F+ M  ++++ WN MI  Y   G      L F+KM 
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325

Query: 207 E-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKC 264
           E +G  PD  T  + L A   L     G  IHG+ +  GF P+    V+  +L+D Y +C
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPH---MVLETALIDMYGEC 378

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L  A  +FD + +K+VISW+S+I  Y Q      A+ELF++L + SL  D   ++S++
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             +A+   + +G++IHAY  K     +T + NS+V MY  CG +++A + FN + +K+VV
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  II  Y  HG  + +V LF +M+   V P+   + ++L+ACS SG+V+E  EYF  +
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             +  + P IEHY C++D +GR G    AK  +E MP  P+  IW +LL+A R H D+ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
                E + +++ DN   YV++ N++A+AG W +  R++ L  SKG+ + + RS VE   
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKG 678

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
           + H F  GD +H  T KI++VL  + + + EE  +V+ V     +   +S+  S R HS 
Sbjct: 679 KSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSV 738

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LA    L+    + + G+ + V  N R+C  CHEF++  S++ +   VV D+  FH F 
Sbjct: 739 RLATCFGLI----STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFS 794

Query: 685 GGVCSCGDYW 694
            G CSCG+YW
Sbjct: 795 NGRCSCGNYW 804



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 256/502 (50%), Gaps = 21/502 (4%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALV-KMGFSFDLMLNNDLIDM----YAKCGEM 63
           VS         R  ++NL  D G+     LV +  +     +N+  +      +A    M
Sbjct: 21  VSSENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLM 80

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  +FD+M + +   W  ++ GF   G     +  + +M  + VK + FT    IK+ 
Sbjct: 81  EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             +SS+E G +IH M +K GF  +  V NS+I +Y K G   +A ++F+ MP + +++WN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +MI+GY+  G     L+LF++M + G  PD F+  S L AC  + S   G +IH   + S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
               +   ++  S++D Y K G +  A R+F+ + Q+++++W+ +I  YA+   + +A  
Sbjct: 261 RIE-TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319

Query: 304 LFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            F+++ E++ LQ D  V++S+  + A   L  +G+ IH YA +        +  +++DMY
Sbjct: 320 CFQKMSEQNGLQPD--VITSINLLPASAIL--EGRTIHGYAMRRGFLPHMVLETALIDMY 375

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            +CG +  A  +F+ M  KNV++W  II  Y ++G    A+ LF+++    + PD     
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIE 478
           ++L A + S  + E +E  + +     +K R    + I++SL       G L++A+    
Sbjct: 436 SILPAYAESLSLSEGREIHAYI-----VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490

Query: 479 SMPVKPSIAIWQTLLSACRVHG 500
            + +K  ++ W +++ A  VHG
Sbjct: 491 HILLKDVVS-WNSIIMAYAVHG 511



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 92/171 (53%), Gaps = 3/171 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SLV +   +A  L   +++L L  G ++H  +VK  +  + ++ N L+ MYA CG++  A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              F+ +L ++VVSW +++  +  +G  +  + LF +M +S V PN+ T ++ + A  + 
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
             V+ G + +   MK  +  +P + +   ++D+  + G  + A R  + MP
Sbjct: 546 GMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 391/673 (58%), Gaps = 20/673 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG ++K G   +  + + L+++YAKCG M  A  VFD ML RNVV+WT LM GF+QN  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            K  + +F +M  +   P+ +TLS  + A   L S++ G Q H   +K   +++  VG++
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +  +YSKCGR+ +A + F  +  K++I+W + ++     G   KGL LF +M      P+
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           EFT TS L  C  + S+  GTQ++   I  G+  +++  +  SL+  Y+K GC+VEA R+
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLR--VRNSLLYLYLKSGCIVEAHRL 326

Query: 274 FDLIEQKSVISWSSLILGYAQ-----EENLA------EAMELFRQLRERSLQVDGFVLSS 322
           F+ ++  S+++W+++I G+AQ     ++NL+      EA++LF +L    ++ D F LSS
Sbjct: 327 FNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSS 386

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++ V +    +EQG+QIHA   K     D  VS S++ MY KCG I+ A++ F EM  + 
Sbjct: 387 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT 446

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           ++ WT +ITG+ +HG++++A+ +F  M L  V P+ V ++ VLSACSH+G+V ++  YF 
Sbjct: 447 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFE 506

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +    ++KP ++HY C+VD   R GRL++A N I+ M  +PS  IW   ++ C+ HG+L
Sbjct: 507 IMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNL 566

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ELG    E LL L   +P  YV++ N++  A  + +  R+RK+   + + K+   SW+ +
Sbjct: 567 ELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISI 626

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF--VYGVKYALHDIQEESKEESLR 620
             +++ F     THP +  I + L ++  ++K  +G+  +  V+ +  + +EE       
Sbjct: 627 KDKVYSFKTNGKTHPQSSLICKSLEDLLAKVK-NVGYEMLESVEISDEEEEEEKTSSPNI 685

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSEKLAI   L     N  P   IRV K+  +C D H FIK +S +     +V+D+ R 
Sbjct: 686 YHSEKLAITFGL-ENLPNSSP---IRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRL 741

Query: 681 HRFEGGVCSCGDY 693
           H+F  G CSCG++
Sbjct: 742 HKFANGECSCGNF 754



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 201/398 (50%), Gaps = 19/398 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L  G Q H  ++K    FD  + + L  +Y+KCG +  A   F ++ 
Sbjct: 171 LSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR 230

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NV+SWT+ +     NG     L LF +M +  +KPNEFTL++ +     + S+E G Q
Sbjct: 231 EKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQ 290

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV---- 190
           ++ +C+K G+E N  V NS++ +Y K G I EA R+F+ M   S++TWNAMIAG+     
Sbjct: 291 VYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMME 350

Query: 191 -------LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
                        + L LF K+   G  PD FT +S L  C  + ++  G QIH   I +
Sbjct: 351 LTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 410

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           GF   V  +++ SL+  Y KCG +  A + F  +  +++I+W+S+I G++Q     +A+ 
Sbjct: 411 GFLSDV--IVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALH 468

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVD 360
           +F  +    ++ +      ++   +   +V Q     +I     K+   +D      +VD
Sbjct: 469 IFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDH--YECMVD 526

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           M+++ G +++A     +M  + +   W+  I G   HG
Sbjct: 527 MFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHG 564


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/690 (34%), Positives = 381/690 (55%), Gaps = 21/690 (3%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L  C +      G  +HG  +  G    + L N LIDMY KC  ++ A  +F+   E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS--GVLSSVENGM 133
            + VSW +L+ G+ + G  +  L L  +M  + ++ N FTL + +K+    + + V  G 
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +HG  +K G + + VVG +++DMY+K G + +A ++F   P ++++ +NAMIAG++   
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293

Query: 194 YSDK-----GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
             DK      L LF +MQ  G  P +FTF+S +K C  + +   G QIH  +        
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNI--Q 351

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               I  +L++ Y   G   +  + F+   +  ++SW+++I GYAQ      A+ LF +L
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL 411

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
                + D F++++M+   AD A    G+Q+H YA K   G    V NS + MY K G +
Sbjct: 412 LASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNL 471

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           D A   F E+   +VV+W+V+I    +HG AK+A+ LF  M    + P+ + +L VL+AC
Sbjct: 472 DSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTAC 531

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLVEE   Y+  +  D  MK  ++H +CIVD L RAGRL +AKN I +        +
Sbjct: 532 SHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVM 591

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W+TLLS CR++ D+  G+ V E L+ LD     +YV++ NI+ DAG      ++R+L + 
Sbjct: 592 WRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKD 651

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           +G++K  G+SW+EV  E+H F  GD +HP+++ I++ L  M ++ K ++G+   +   + 
Sbjct: 652 RGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEK-KRKIGY---IDQKIQ 707

Query: 609 DIQEESKEES----LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           ++   +KE      +  HSEKLA+   +V    +  P   ++V KNLRVC DCH  +K +
Sbjct: 708 NVTISTKEVKGTLGVNHHSEKLAVSFGIV----SLPPSAPVKVMKNLRVCHDCHATMKLI 763

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S + K   ++RD+ RFH F+ G CSC DYW
Sbjct: 764 SVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 243/482 (50%), Gaps = 19/482 (3%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G   H  ++K  F+  L L N+ +++Y+K GEM  A  +FD+M ER+V+S+  L+ G+ 
Sbjct: 27  HGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYG 86

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G     + LF +   + +K ++F+ +  + A G +     G  IHG+ +  G      
Sbjct: 87  GMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVF 146

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + N +IDMY KC RI+ A  +F+       ++WN++I GY   G  ++ L L  KM   G
Sbjct: 147 LTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG 206

Query: 210 EIPDEFTFTSTLKAC--GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              + FT  S LK+C       V  G  +HG+ +  G    +  V+  +L+D Y K G L
Sbjct: 207 LRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDI--VVGTALLDMYAKTGYL 264

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENL-----AEAMELFRQLRERSLQVDGFVLSS 322
            +A ++F     ++V+ ++++I G+ Q E++      EA++LF Q++ + ++   F  SS
Sbjct: 265 GDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSS 324

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++ +       E GKQIHA+  K     D  + ++++++Y   G  ++  + FN  P  +
Sbjct: 325 IIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLD 384

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           +V+WT +I GY ++G  + A+ LF ++L    +PD      +LSAC+     + + E   
Sbjct: 385 IVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACA-----DVAAERSG 439

Query: 443 RLCNDKRMKPRIEHYSCIVDS----LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
              +   +K  I   + + +S      ++G LD AK   E +   P +  W  ++ +   
Sbjct: 440 EQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICSNAQ 498

Query: 499 HG 500
           HG
Sbjct: 499 HG 500



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 214/459 (46%), Gaps = 19/459 (4%)

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMC-----MKSGFEWNPVVGNSIIDMYSKCGRIN 165
           P+ F L +      V  S ++G  IHG       +K+ F     + N+ +++YSK G + 
Sbjct: 2   PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A ++FD M  +S+I++N +I+GY   G+  K + LF + +      D+F++   L ACG
Sbjct: 62  NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            +     G  IHG  I  G    V   +   L+D Y KC  +  AR +F+  ++   +SW
Sbjct: 122 QIKDFALGKVIHGLAIVCGLGQQV--FLTNLLIDMYCKCERIDHARLLFESSDELDNVSW 179

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL-SSMMGVFADF-ALVEQGKQIHAYA 343
           +SLI GYA+     E ++L  ++    L+++ F L S++   + +   +V  GK +H Y 
Sbjct: 180 NSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYT 239

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK-----HGL 398
            K    LD  V  +++DMY K G + +A +LF   P +NVV +  +I G+ +        
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKEC 299

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           A EA+ LF +M    ++P    + +++  C+H    E  ++  + +C            S
Sbjct: 300 AYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIG-S 358

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
            +++     G  ++      S P K  I  W T+++    +G  E    +   LL   G 
Sbjct: 359 TLIELYSLLGSTEDQLKCFNSTP-KLDIVSWTTMIAGYAQNGQFESALALFYELLA-SGK 416

Query: 519 NPVNYVMMSNIH--ADAGSWNECERLRKLARSKGLKKVA 555
            P  +++ + +   AD  +    E++   A   G+  +A
Sbjct: 417 KPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLA 455


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/700 (33%), Positives = 376/700 (53%), Gaps = 40/700 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDM--YAKCGEMNGACAVFDKMLERNVVSWTALM 85
           +D   Q+H   +K G + + +L N ++      + G+   A  +FD++ E N+  W  ++
Sbjct: 31  MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 90

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            G+ +    +  +SL+ +M    VKP+ +T     K      ++E G Q+HG  +K G +
Sbjct: 91  RGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQ 150

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           +N  V  +++ MY  CG+++ A  +FDV P   +ITWN +I+ Y   G  ++   LF  M
Sbjct: 151 YNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM 210

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           ++   +P   T    L AC  L  +  G ++H ++       ++  V+  +++D Y  CG
Sbjct: 211 EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL--VLENAMIDMYADCG 268

Query: 266 CLVE-------------------------------ARRVFDLIEQKSVISWSSLILGYAQ 294
            +                                 AR  FD + +K  +SW+++I GY +
Sbjct: 269 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 328

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA+ELFR ++  +++ D F + S++   A    +E G+ I  Y  +     D  V
Sbjct: 329 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFV 388

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+++DMY KCG +D+A  +F EM  ++  TWT +I G   +G  ++A+ +F  ML   +
Sbjct: 389 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 448

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            PD + Y+ VLSAC+H+GLV++ ++YF R+ +   ++P I HY C+VD L RAGRL EA 
Sbjct: 449 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 508

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            +IE+MP+K +  +W  LL+ CRV+ + ++   V + +L L+ DN   YV++ NI+A   
Sbjct: 509 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 568

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            WN+   LR++   KG+KK  G S +E++  +H F  GD +HP T+ I   L +M + +K
Sbjct: 569 RWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 628

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
              G+   +     DI EE KE S+  HSEKLAI   L+    N  PG  IR+ KNLR+C
Sbjct: 629 LA-GYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLI----NSPPGVTIRITKNLRMC 683

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +SK+     +VRD TRFH F+ G+CSC DYW
Sbjct: 684 MDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 214/439 (48%), Gaps = 43/439 (9%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           ++++ L+YG QLHG ++K G  +++ ++  L+ MY  CG+++ A  VFD   + +V++W 
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
            ++  + + G  +    LF  M    V P   TL   + A   L  +  G ++H      
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248

Query: 143 GFEWNPVVGNSIIDMYSKC-------------------------------GRINEAARMF 171
             E N V+ N++IDMY+ C                               G I+ A   F
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D MP K  ++W AMI GY+ +    + L LFR MQ     PDEFT  S L AC  LG++ 
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  I  ++  +     +   +  +L+D Y KCG + +A  +F  + Q+   +W+++I+G
Sbjct: 369 LGEWIRTYIDRNKIKNDL--FVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 426

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS--G 349
            A   +  +A+++F  + + S+  D      ++       LV++G++   Y  ++ S  G
Sbjct: 427 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHG 483

Query: 350 LDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLF 406
           ++ ++++   +VD+  + G + EA E+   MP+K N + W  ++ G   +  +  A  + 
Sbjct: 484 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 543

Query: 407 RKMLLDDVEPDGVAYLAVL 425
           +++L  ++EPD  A   +L
Sbjct: 544 KQIL--ELEPDNGAVYVLL 560



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDM--YSKCGRINEAARMFDVMPAKSLITWNAM 185
           S++   Q+H   +K G   NPV+ N ++      + G    A R+FD +P  +L  WN M
Sbjct: 30  SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTM 89

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I GY    +   G+ L+ +M   G  PD +TF    K      ++  G Q+HG ++  G 
Sbjct: 90  IRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL 149

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            Y+V   +  +LV  Y+ CG L  AR VFD+  +  VI+W+ +I  Y +     E+  LF
Sbjct: 150 QYNV--FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 207

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             + ++ +      L  ++   +    +  GK++H+Y        +  + N+++DMY  C
Sbjct: 208 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 267

Query: 366 -------------------------------GLIDEATELFNEMPVKNVVTWTVIITGYG 394
                                          G ID A   F++MP K+ V+WT +I GY 
Sbjct: 268 GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYI 327

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +    KEA+ LFR M   +V+PD    ++VL+AC+H G +E   E+     +  ++K  +
Sbjct: 328 RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDL 386

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + ++D   + G +D+A+++   M  +     W  ++    V+G
Sbjct: 387 FVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVGLAVNG 431



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 41/339 (12%)

Query: 2   NRVSFSLVSERQRLADS------LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           +R  F ++ ++Q L  +      L  CSK   L  G ++H  +       +L+L N +ID
Sbjct: 203 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 262

Query: 56  MYAKCGEMNGACAV-------------------------------FDKMLERNVVSWTAL 84
           MYA CGEM+ A  +                               FDKM E++ VSWTA+
Sbjct: 263 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 322

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           + G++++   K  L LF  M +++VKP+EFT+ + + A   L ++E G  I     ++  
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           + +  V N++IDMY KCG +++A  +F  M  +   TW AMI G  + G+ +K L +F  
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 442

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M +   +PDE T+   L AC   G V  G + +   +TS           G LVD   + 
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHGIEPNIAHYGCLVDLLARA 501

Query: 265 GCLVEARRVFDLIEQKS-VISWSSLILG--YAQEENLAE 300
           G L EA  V + +  K+  I W +L+ G    +E ++AE
Sbjct: 502 GRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 540



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 2/191 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+ G  +   + +     DL + N LIDMY KCG+++ A ++F +M +R+ 
Sbjct: 358 LTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDK 417

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH-G 137
            +WTA++ G   NG+ +  L +F  M  +S+ P+E T    + A      V+ G +    
Sbjct: 418 FTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLR 477

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSD 196
           M  + G E N      ++D+ ++ GR+ EA  + + MP K+  I W A++AG  +   SD
Sbjct: 478 MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESD 537

Query: 197 KGLLLFRKMQE 207
              ++ +++ E
Sbjct: 538 MAEMVVKQILE 548


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/648 (36%), Positives = 368/648 (56%), Gaps = 31/648 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  YA+ G ++ A +VFD+M E+N VSW AL+  ++QN   +    LF        +
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF------KSR 214

Query: 111 PNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            N   +S N    G +     VE       M ++    WN     +II  Y++ G+I+EA
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN-----TIITGYAQSGKIDEA 269

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            ++FD  P + + TW AM++GY+     ++   LF KM E  E+    ++ + L      
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV----SWNAMLA----- 320

Query: 228 GSVGGGTQIHGFLITSGFP-YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           G V G        +    P  +V T    +++  Y +CG + EA+ +FD + ++  +SW+
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I GY+Q  +  EA+ LF Q+     +++    SS +   AD   +E GKQ+H    K 
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                  V N+++ MY KCG I+EA +LF EM  K++V+W  +I GY +HG  + A+  F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             M  + ++PD    +AVLSACSH+GLV++ ++YF  +  D  + P  +HY+C+VD LGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG L++A NL+++MP +P  AIW TLL A RVHG+ EL     + +  ++ +N   YV++
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SN++A +G W +  +LR   R KG+KKV G SW+E+  + H F  GD+ HP  ++I   L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            E++ RMK + G+V      LHD++EE KE  +R HSE+LA+   ++R       G+ IR
Sbjct: 679 EELDLRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR----VSSGRPIR 733

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V KNLRVC DCH  IK +++I   + ++RD  RFH F+ G CSCGDYW
Sbjct: 734 VIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 24/388 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I  YA+ G+++ A  +FD+   ++V +WTA++ G++QN   +    LF +M 
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM- 307

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV----VGNSIIDMYSKC 161
                P    +S N   +G +      M       K  F+  P       N++I  Y++C
Sbjct: 308 -----PERNEVSWNAMLAGYVQGERMEMA------KELFDVMPCRNVSTWNTMITGYAQC 356

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G+I+EA  +FD MP +  ++W AMIAGY  +G+S + L LF +M+  G   +  +F+S L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
             C  + ++  G Q+HG L+  G  Y     +  +L+  Y KCG + EA  +F  +  K 
Sbjct: 417 STCADVVALELGKQLHGRLVKGG--YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           ++SW+++I GY++      A+  F  ++   L+ D   + +++   +   LV++G+Q + 
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YF 533

Query: 342 YAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGL 398
           Y      G+  ++     +VD+  + GL+++A  L   MP + +   W  ++     HG 
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            + A     K+    +EP+      +LS
Sbjct: 594 TELAETAADKIFA--MEPENSGMYVLLS 619



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 176/351 (50%), Gaps = 35/351 (9%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           EWN  + +     Y + GR NEA R+F  MP  S +++N MI+GY+  G  +    LF +
Sbjct: 66  EWNVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M E     D  ++   +K      ++G   ++   +       S  T+++G     Y + 
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC-SWNTMLSG-----YAQN 170

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           GC+ +AR VFD + +K+ +SW++L+  Y Q   + EA  LF+     +L       + ++
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLL 226

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
           G F     + + +Q         +  D    N+I+  Y + G IDEA +LF+E PV++V 
Sbjct: 227 GGFVKKKKIVEARQFF----DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           TWT +++GY ++ + +EA  LF KM     E + V++ A+L+       +E ++E F  +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVM 338

Query: 445 -CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            C +      +  ++ ++    + G++ EAKNL + MP +  ++ W  +++
Sbjct: 339 PCRN------VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIA 382



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 10/176 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR SFS          +L  C+  + L+ G QLHG LVK G+     + N L+ MY KC
Sbjct: 407 LNRSSFS---------SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  +F +M  +++VSW  ++ G+ ++G  +  L  F  M    +KP++ T+   +
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            A      V+ G Q  + M    G   N      ++D+  + G + +A  +   MP
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/624 (36%), Positives = 365/624 (58%), Gaps = 21/624 (3%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +S   L+    + G  K  L +  Q  S    P++ T    I   G  SS+ +G+++H  
Sbjct: 47  ISNNQLIQSLCKEGKLKQALRVLSQESS----PSQQTYELLILCCGHRSSLSDGLRVHRH 102

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +G + +P +   +I MYS  G ++ A ++FD    +++  WNA+     LAG+ ++ 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKAC----GSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           L L+ KM   G   D FT+T  LKAC     +   +  G +IH  L   G  Y+    I 
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG--YNSHVYIM 220

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL--RERS 312
            +LVD Y + GC+  A  VF+ +  ++V+SWS++I  YA+     EA+  FR++    + 
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDE 370
              +   + S++   A  A +EQG+ IH Y  +   GLD+   V +++V MY +CG +D 
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILR--RGLDSILPVISALVTMYGRCGKLDV 338

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
              +F+ M  ++VV+W  +I+ YG HG  ++A+ +F +ML +   P  V +++VL ACSH
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSH 398

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLVEE +  F  +  D  +KP++EHY+C+VD LGRA RLDEA  +++ M  +P   +W 
Sbjct: 399 EGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL +CR+HG++EL       L  L+  N  NYV++++I+A+A  W+E +R++KL   +G
Sbjct: 459 SLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG 518

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           L+K+ GR W+EV ++++ F   D+ +PL E+IH  L+++ + MKE+ G++   K  L+++
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEK-GYIPQTKGVLYEL 577

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           + E KE  +  HSEKLA+   L+    N   G+ IR+ KNLR+C DCH F K +SK ++ 
Sbjct: 578 ETEEKERIVLGHSEKLALAFGLI----NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD  RFHRF+ GVCSCGDYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 2/211 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++H  L + G++  + +   L+DMYA+ G ++ A  VF+ M  RNVVSW+A++  
Sbjct: 198 LTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIAC 257

Query: 88  FLQNGNAKACLSLFCQMGSSS--VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           + +NG A   L  F +M + +    PN  T+ + ++A   L+++E G  IHG  ++ G +
Sbjct: 258 YAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLD 317

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
               V ++++ MY +CG+++   R+FD M  + +++WN++I+ Y + GY  K + +F +M
Sbjct: 318 SILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM 377

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
             +G  P   TF S L AC   G V  G ++
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRL 408



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G  +HG +++ G    L + + L+ MY +CG+++    VFD+M +R+V
Sbjct: 292 LQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDV 351

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           VSW +L+  +  +G  +  + +F +M ++   P   T  + + A      VE G ++   
Sbjct: 352 VSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFES 411

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           M    G +        ++D+  +  R++EAA+M   M
Sbjct: 412 MWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/697 (34%), Positives = 379/697 (54%), Gaps = 43/697 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + L++        +G   A +VFD + E  ++ W  +  G   
Sbjct: 21  IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     + + G Q+HG  +K GF+ +  +
Sbjct: 81  SSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYI 140

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I MY + GR                               I  A +MFD +P K +
Sbjct: 141 HTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDV 200

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNA I+GY   G   + L LF+KM +    PDE T  + L AC   GS+  G Q+H +
Sbjct: 201 VSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSW 260

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y KCG L  A  +F  +  K VISW++LI GY       
Sbjct: 261 INDHGFGXNLK--IVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNS 357
           EA+ LF+ +     + +   + S++   A    ++ G+ IH Y  K   G+   +S+  S
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++F+ M  +++ +W  +I G+  HG A  A  +F +M  + +EPD
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D ++ P++EHY C++D  G +G   EA+ +I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI 498

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            +M ++P   IW +LL AC++HG++ELG    + L++++ +NP +YV++SNI+A A  WN
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  + R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  ++E  
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEA- 617

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 673

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           HE  K +SKI K   + RD TRFH F  G CSC DYW
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 143/274 (52%), Gaps = 4/274 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  ++ G Q+H  +   GF  +L + N LID+Y+KCGE+  AC +F  +  ++V
Sbjct: 242 LSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDV 301

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  L+ G+      K  L LF  M  S  KPN+ T+ + + A   L +++ G  IH  
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVY 361

Query: 139 CMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
             K   G      +  S+IDMY+KCG I  A ++FD M  +SL +WNAMI G+ + G ++
Sbjct: 362 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRAN 421

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
               +F +M+++G  PD+ TF   L AC   G +  G  I   + T  +    K    G 
Sbjct: 422 AAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM-TRDYKLMPKLEHYGC 480

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           ++D     G   EA ++ + +E +   + W SL+
Sbjct: 481 MIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLL 514


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/700 (33%), Positives = 376/700 (53%), Gaps = 40/700 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDM--YAKCGEMNGACAVFDKMLERNVVSWTALM 85
           +D   Q+H   +K G + + +L N ++      + G+   A  +FD++ E N+  W  ++
Sbjct: 52  MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 111

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            G+ +    +  +SL+ +M    VKP+ +T     K      ++E G Q+HG  +K G +
Sbjct: 112 RGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQ 171

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           +N  V  +++ MY  CG+++ A  +FDV P   +ITWN +I+ Y   G  ++   LF  M
Sbjct: 172 YNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVM 231

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           ++   +P   T    L AC  L  +  G ++H ++       ++  V+  +++D Y  CG
Sbjct: 232 EDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL--VLENAMIDMYADCG 289

Query: 266 CLVE-------------------------------ARRVFDLIEQKSVISWSSLILGYAQ 294
            +                                 AR  FD + +K  +SW+++I GY +
Sbjct: 290 EMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIR 349

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA+ELFR ++  +++ D F + S++   A    +E G+ I  Y  +     D  V
Sbjct: 350 SNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFV 409

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+++DMY KCG +D+A  +F EM  ++  TWT +I G   +G  ++A+ +F  ML   +
Sbjct: 410 RNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASI 469

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            PD + Y+ VLSAC+H+GLV++ ++YF R+ +   ++P I HY C+VD L RAGRL EA 
Sbjct: 470 LPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAY 529

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            +IE+MP+K +  +W  LL+ CRV+ + ++   V + +L L+ DN   YV++ NI+A   
Sbjct: 530 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 589

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            WN+   LR++   KG+KK  G S +E++  +H F  GD +HP T+ I   L +M + +K
Sbjct: 590 RWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 649

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
              G+   +     DI EE KE S+  HSEKLAI   L+    N  PG  IR+ KNLR+C
Sbjct: 650 LA-GYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLI----NSPPGVTIRITKNLRMC 704

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +SK+     +VRD TRFH F+ G+CSC DYW
Sbjct: 705 MDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 214/439 (48%), Gaps = 43/439 (9%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           ++++ L+YG QLHG ++K G  +++ ++  L+ MY  CG+++ A  VFD   + +V++W 
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
            ++  + + G  +    LF  M    V P   TL   + A   L  +  G ++H      
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269

Query: 143 GFEWNPVVGNSIIDMYSKC-------------------------------GRINEAARMF 171
             E N V+ N++IDMY+ C                               G I+ A   F
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D MP K  ++W AMI GY+ +    + L LFR MQ     PDEFT  S L AC  LG++ 
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  I  ++  +     +   +  +L+D Y KCG + +A  +F  + Q+   +W+++I+G
Sbjct: 390 LGEWIRTYIDRNKIKNDL--FVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVG 447

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS--G 349
            A   +  +A+++F  + + S+  D      ++       LV++G++   Y  ++ S  G
Sbjct: 448 LAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHG 504

Query: 350 LDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLF 406
           ++ ++++   +VD+  + G + EA E+   MP+K N + W  ++ G   +  +  A  + 
Sbjct: 505 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 564

Query: 407 RKMLLDDVEPDGVAYLAVL 425
           +++L  ++EPD  A   +L
Sbjct: 565 KQIL--ELEPDNGAVYVLL 581



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDM--YSKCGRINEAARMFDVMPAKSLITWNAM 185
           S++   Q+H   +K G   NPV+ N ++      + G    A R+FD +P  +L  WN M
Sbjct: 51  SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTM 110

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I GY    +   G+ L+ +M   G  PD +TF    K      ++  G Q+HG ++  G 
Sbjct: 111 IRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL 170

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            Y+V   +  +LV  Y+ CG L  AR VFD+  +  VI+W+ +I  Y +     E+  LF
Sbjct: 171 QYNV--FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 228

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             + ++ +      L  ++   +    +  GK++H+Y        +  + N+++DMY  C
Sbjct: 229 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 288

Query: 366 -------------------------------GLIDEATELFNEMPVKNVVTWTVIITGYG 394
                                          G ID A   F++MP K+ V+WT +I GY 
Sbjct: 289 GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYI 348

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +    KEA+ LFR M   +V+PD    ++VL+AC+H G +E   E+     +  ++K  +
Sbjct: 349 RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDL 407

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + ++D   + G +D+A+++   M  +     W  ++    V+G
Sbjct: 408 FVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVGLAVNG 452



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 164/339 (48%), Gaps = 41/339 (12%)

Query: 2   NRVSFSLVSERQRLADS------LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           +R  F ++ ++Q L  +      L  CSK   L  G ++H  +       +L+L N +ID
Sbjct: 224 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 283

Query: 56  MYAKCGEMNGACAV-------------------------------FDKMLERNVVSWTAL 84
           MYA CGEM+ A  +                               FDKM E++ VSWTA+
Sbjct: 284 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 343

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           + G++++   K  L LF  M +++VKP+EFT+ + + A   L ++E G  I     ++  
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 403

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           + +  V N++IDMY KCG +++A  +F  M  +   TW AMI G  + G+ +K L +F  
Sbjct: 404 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 463

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M +   +PDE T+   L AC   G V  G + +   +TS           G LVD   + 
Sbjct: 464 MLKASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHGIEPNIAHYGCLVDLLARA 522

Query: 265 GCLVEARRVFDLIEQKS-VISWSSLILG--YAQEENLAE 300
           G L EA  V + +  K+  I W +L+ G    +E ++AE
Sbjct: 523 GRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 561



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 2/191 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+ G  +   + +     DL + N LIDMY KCG+++ A ++F +M +R+ 
Sbjct: 379 LTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDK 438

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH-G 137
            +WTA++ G   NG+ +  L +F  M  +S+ P+E T    + A      V+ G +    
Sbjct: 439 FTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLR 498

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSD 196
           M  + G E N      ++D+ ++ GR+ EA  + + MP K+  I W A++AG  +   SD
Sbjct: 499 MTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESD 558

Query: 197 KGLLLFRKMQE 207
              ++ +++ E
Sbjct: 559 MAEMVVKQILE 569


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/678 (35%), Positives = 388/678 (57%), Gaps = 16/678 (2%)

Query: 15   LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            L   L  C++   +  G  +HG  VK+    +L+LNN L+DMY+KCG +  A  +F    
Sbjct: 650  LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 709

Query: 75   ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
             +NVVSW  ++ GF   G+      +  QM  G   VK +E T+   +      S + + 
Sbjct: 710  NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 769

Query: 133  MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             ++H   +K  F +N +V N+ +  Y+KCG ++ A R+F  + +K++ +WNA+I G+  +
Sbjct: 770  KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 829

Query: 193  GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
                  L    +M+  G +PD FT  S L AC  L S+  G ++HGF+I +     +   
Sbjct: 830  NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 889

Query: 253  IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
            +  S++  Y+ CG L   + +FD +E KS++SW+++I GY Q      A+ +FRQ+    
Sbjct: 890  L--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 947

Query: 313  LQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            +Q+ G    SMM VF   +L+     G++ HAYA K     D  ++ S++DMY K G I 
Sbjct: 948  IQLCGI---SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 1004

Query: 370  EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            +++++FN +  K+  +W  +I GYG HGLAKEA+ LF +M      PD + +L VL+AC+
Sbjct: 1005 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 1064

Query: 430  HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAI 488
            HSGL+ E   Y  ++ +   +KP ++HY+C++D LGRAG+LD+A  ++ E M  +  + I
Sbjct: 1065 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 1124

Query: 489  WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
            W++LLS+CR+H +LE+G +V   L  L+ + P NYV++SN++A  G W +  ++R+    
Sbjct: 1125 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 1184

Query: 549  KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
              L+K AG SW+E+++++  F  G+      E+I  +   +E ++  ++G+        H
Sbjct: 1185 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS-KMGYRPDTMSVQH 1243

Query: 609  DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
            D+ EE K E LR HSEKLA+   L++       G  IRV+KNLR+C DCH   K +SK++
Sbjct: 1244 DLSEEEKIEQLRGHSEKLALTYGLIK----TSEGTTIRVYKNLRICVDCHNAAKLISKVM 1299

Query: 669  KLVFVVRDATRFHRFEGG 686
            +   VVRD  RFH F+ G
Sbjct: 1300 EREIVVRDNKRFHHFKNG 1317



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 207/391 (52%), Gaps = 9/391 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +L   +I MYA CG  + +  VFD +  +N+  W A++  + +N      L  F +M 
Sbjct: 474 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 106 SSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
           S++ + P+ FT    IKA   +S V  G+ +HG+ +K+G   +  VGN+++  Y   G +
Sbjct: 534 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 593

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF-RKMQEHGE---IPDEFTFTST 220
            +A ++FD+MP ++L++WN+MI  +   G+S++  LL    M+E+G+   +PD  T  + 
Sbjct: 594 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 653

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L  C     +G G  +HG+ +        + V+  +L+D Y KCGC+  A+ +F +   K
Sbjct: 654 LPVCAREREIGLGKGVHGWAVK--LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 711

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           +V+SW++++ G++ E +     ++ RQ+      ++ D   + + + V    + +   K+
Sbjct: 712 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 771

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +H Y+ K     +  V+N+ V  Y KCG +  A  +F+ +  K V +W  +I G+ +   
Sbjct: 772 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 831

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            + ++    +M +  + PD     ++LSACS
Sbjct: 832 PRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/735 (34%), Positives = 401/735 (54%), Gaps = 93/735 (12%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            + C +    + G  +HG ++++GF  ++ + N +I MY KC  +  A  VFD++  R +
Sbjct: 133 FKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGI 192

Query: 79  ---VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              V+W +++  +         +SLF +M     + P+   +   +   G L     G Q
Sbjct: 193 CDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQ 252

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
           +HG C++SG   +  VGN+++DMY+KCG++ +A ++F+ M  K ++TWNAM+ GY     
Sbjct: 253 VHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGR 312

Query: 190 -------------------------VLAGYSDKG-----LLLFRKMQEHGEIPDEFTFTS 219
                                    V++GY+ +G     + +FR+M      P+  T  S
Sbjct: 313 FEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMS 372

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-------------SLVDFYVKCGC 266
            L AC S+G++  G + H         YSVK ++ G             +L+D Y KC  
Sbjct: 373 LLSACASVGALLHGKETHC--------YSVKFILKGEHNDDTDDLAVINALIDMYAKCKS 424

Query: 267 LVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLR--ERSLQVDGFVLSS 322
           L  AR +FD I  + + V++W+ +I GYAQ  +   A++LF ++   +  +  + F +S 
Sbjct: 425 LEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISC 484

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSV---SNSIVDMYLKCGLIDEATELFNEMP 379
           ++   A  A ++ GKQIHAY  +  S +D+ V   +N ++DMY K G +D A  +F+ M 
Sbjct: 485 VLMACARLAALKFGKQIHAYVLR-RSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 543

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            +N V+WT ++TGYG HG +++A  +F +M  + +  DG+ +L VL ACSHSG+      
Sbjct: 544 KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM------ 597

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
                  D  + P +EHY+C+VD LGRAGRL EA  LI  MP++P+  +W  LLSACR+H
Sbjct: 598 -------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 650

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            + EL     + LL L  DN   Y ++SNI+A+A  W +  R+  L +  G+KK+ G SW
Sbjct: 651 SNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSW 710

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           V+  K +  FY GD TH  ++KI++ L ++ KR+K          ++LHD+ +E K + L
Sbjct: 711 VKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK--------ANFSLHDVDDEEKGDQL 762

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLA+  A+    L   PG  IR+ KNLR+CGD H  I  +S I++   ++RD++R
Sbjct: 763 SEHSEKLALAYAI----LTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSR 818

Query: 680 FHRFEGGVCSCGDYW 694
           FH+F+ G CSC  YW
Sbjct: 819 FHQFKNGSCSCKGYW 833



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 239/489 (48%), Gaps = 61/489 (12%)

Query: 73  MLERNVVS-------WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           +LE+NV         W  L+   L   +    L LF +M +    P+ +T     KA G 
Sbjct: 79  LLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGE 138

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL---ITW 182
           +S+ E G  IHG  ++ GFE N  V N++I MY KC  +  A ++FD +  + +   +TW
Sbjct: 139 ISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTW 198

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           N++++ Y      +  + LFR+M   +G +PD     + L  CG LG    G Q+HGF +
Sbjct: 199 NSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCV 258

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            SG    V   +  +LVD Y KCG + +A +VF+ +  K V++W++++ GY+Q     +A
Sbjct: 259 RSGLVEDV--FVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDA 316

Query: 302 MELFRQLRERSLQVD--------------GF---------------------VLSSMMGV 326
           + LF ++RE  ++ D              GF                      L S++  
Sbjct: 317 LSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSA 376

Query: 327 FADFALVEQGKQIHAYAAKV-------PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            A    +  GK+ H Y+ K            D +V N+++DMY KC  ++ A  +F+E+ 
Sbjct: 377 CASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEIC 436

Query: 380 VK--NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVE 435
            K  +VVTWTV+I GY +HG A  A+ LF +M   D  + P+      VL AC+    ++
Sbjct: 437 PKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALK 496

Query: 436 ESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             ++  + +    R+   +   + C++D   ++G +D A+ + +SM  + +++ W +LL+
Sbjct: 497 FGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS-WTSLLT 555

Query: 495 ACRVHGDLE 503
              +HG  E
Sbjct: 556 GYGMHGRSE 564


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/677 (34%), Positives = 376/677 (55%), Gaps = 8/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G+++HG +++ GF  D+ +   LI+MY KCG + GA   F ++  R+V
Sbjct: 112 LNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 171

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++   +Q+        L+ +M    V PN+ TL T   A G  + +  G  ++G+
Sbjct: 172 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGL 231

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                 E +  V NS ++M+   G + +A R+F+ M  + ++TWN +I  YV      + 
Sbjct: 232 VSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEA 291

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF ++Q+ G   ++ TF   L    SL S+  G  IH  +  +G  Y    V+A +L+
Sbjct: 292 VRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAG--YDRDAVVATALM 349

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +C    +A ++F  +  K VI+W+ + + YAQ     EA++LF++++    +    
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L +++   A  A +++G+QIH++  +    ++  V  ++++MY KCG + EA  +F +M
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKM 469

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++++ W  ++  Y +HG   E + LF +M LD V+ D V++++VLSA SHSG V +  
Sbjct: 470 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGY 529

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACR 497
           +YF  +  D  + P  E Y C+VD LGRAGR+ EA +++  +    P   +W TLL ACR
Sbjct: 530 QYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACR 589

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            H   +  +   E +L  D  +   YV++SN++A AG W+   R+RKL RS+G+KK  GR
Sbjct: 590 THNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR 649

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +E+   +H F  GD +HP    I+  L  +   M+   G++   K  LHD+++E KE+
Sbjct: 650 SSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAA-GYIPDTKMILHDVEDERKED 708

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   L+    +  PG  +RV KNLRVC DCH   K +SK+     +VRD 
Sbjct: 709 MLFYHSERLAIAFGLI----STPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDT 764

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC DYW
Sbjct: 765 HRFHNFKDGRCSCKDYW 781



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 261/483 (54%), Gaps = 6/483 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    +D+G ++H  +   GF  + ++   LI MYA+CG +  A  VF+ +  ++V
Sbjct: 11  LQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 70

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +WT ++  + Q G+    L +F QM    V P + T    + A     S+++GM+IHG 
Sbjct: 71  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 130

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  VG ++I+MY+KCG +  A   F  +  + +++W AMIA  V        
Sbjct: 131 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 190

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             L+R+MQ  G +P++ T  +   A G    +  G  ++G L++SG   S   V+  S V
Sbjct: 191 RWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYG-LVSSGVMESDVRVM-NSAV 248

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + +   G L +ARR+F+ +  + V++W+ +I  Y Q EN  EA+ LF +L++  ++ +  
Sbjct: 249 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDI 308

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               M+ V+     + +GK IH    +     D  V+ +++ +Y +C    +A ++F +M
Sbjct: 309 TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDM 368

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V+TWTV+   Y ++G  KEA+ LF++M L+   P     +AVL  C+H   +++ +
Sbjct: 369 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 428

Query: 439 EYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +  S +  ++ RM+  +E  + +++  G+ G++ EA ++ E M  K  I +W ++L A  
Sbjct: 429 QIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM-AKRDILVWNSMLGAYA 485

Query: 498 VHG 500
            HG
Sbjct: 486 QHG 488



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           KP+       ++      +V++G ++H      GFE N +V   +I MY++CG + EA +
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F+++  K +  W  MI  Y   G  D+ L +F +MQE   +P + T+ + L AC S  S
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G +IHG ++  GF   V   +  +L++ Y KCG +  A   F  +E + V+SW+++I
Sbjct: 121 LKDGMEIHGQILQQGFEGDV--FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
               Q +  A A  L+R+++   +  +   L ++   + D   + +GK ++   +     
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            D  V NS V+M+   GL+ +A  LF +M  ++VVTW ++IT Y ++    EAV LF ++
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 410 LLDDVEPDGVAYLAVLS 426
             D V+ + + ++ +L+
Sbjct: 299 QQDGVKANDITFVLMLN 315


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/793 (32%), Positives = 408/793 (51%), Gaps = 119/793 (15%)

Query: 13  QRLADSLRCCSKNLLLDYGV--QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           Q  A   +CC  N +  Y +   +H  ++  GF     + N LID+Y K  ++  A  +F
Sbjct: 15  QYAAQLQQCCPHNPM-SYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLF 73

Query: 71  DKMLE---------------------------------RNVVSWTALMCGFLQNGNAKAC 97
           D++ +                                 R+ V + A++ G+  N +    
Sbjct: 74  DEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGA 133

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHGMCMKSGFEWNPVVGNSIID 156
           + LF  +  +  +P+ FT ++ + A  ++   E    QIH   +KSG  +   V N+++ 
Sbjct: 134 IELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLS 193

Query: 157 MYSKC----------------------------------------GRINEAARMFDVMPA 176
           ++ KC                                        G ++ A +  D M  
Sbjct: 194 VFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTE 253

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           K ++ WNAMI+GYV  G+  + L +FRKM   G   DEFT+TS L AC + G    G Q+
Sbjct: 254 KLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQV 313

Query: 237 HGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           H +++ +    S+   ++   +L   Y KCG + EAR+VF+ +  K ++SW++++ GY  
Sbjct: 314 HAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVN 373

Query: 295 EENLAEAMELFRQLRERSL--------------------------QVDGF-----VLSSM 323
              + EA   F ++ ER+L                          + +GF       +  
Sbjct: 374 AGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGA 433

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK 381
           +   A  A +  G+Q+HA   ++  G D+S+S  N+++ MY KCG+++ A  LF  MP  
Sbjct: 434 IIACAWLAALMHGRQLHAQLVRL--GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL 491

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           + V+W  +I   G+HG   +A+ LF  ML +D+ PD + +L VLS CSH+GLVEE   YF
Sbjct: 492 DSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYF 551

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             +     + P  +HY+ ++D L RAG+  EAK++IE+MPV+P   IW+ LL+ CR+HG+
Sbjct: 552 KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           ++LG +  E L  L   +   YV++SN++A  G W++  ++RKL R KG+KK  G SW+E
Sbjct: 612 MDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIE 671

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           V+ ++H F   D  HP  + ++  L E+  +M+ +LG++   K+ LHD++ E KE  L  
Sbjct: 672 VENKVHVFLVDDIVHPEVQAVYNYLEELGLKMR-KLGYIPDTKFVLHDMESEQKEYVLST 730

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSEKLA+G  L++  L    G  +RVFKNLR+CGDCH   K +SK+++   VVRD  RFH
Sbjct: 731 HSEKLAVGFGLLKLPL----GATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFH 786

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSCG+YW
Sbjct: 787 HFKNGECSCGNYW 799


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/689 (35%), Positives = 384/689 (55%), Gaps = 43/689 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN-------GACAVFD 71
           L+ C+  + L+ G  LHG ++++G  FDL   N L++MY+K   +        GA  V D
Sbjct: 115 LKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLD 174

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +M ER     TA +   + N   K           S ++   + +S          S E 
Sbjct: 175 EMTERTRSVRTASV--LVGNQGRKV----------SDIEAFNYDVSCR--------SREF 214

Query: 132 GMQIHGMCMKSGFEWNPV----VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
             Q+  +  K   E+  +    +G  I D+ S    ++   ++F++MP K L++WN +IA
Sbjct: 215 EAQVLEIDYKPRSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIA 273

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    G   + L + R+M      PD FT +S L        +  G +IHG  I  G   
Sbjct: 274 GNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDA 333

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V   +A SL+D Y KC  +V++ RVF L+ ++  ISW+S+I G  Q     E ++ FRQ
Sbjct: 334 EV--YVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQ 391

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKC 365
           +    ++   +  SS+M   A    +  GKQ+H Y  +  +G D ++  ++S+VDMY KC
Sbjct: 392 MLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR--NGFDENIFIASSLVDMYAKC 449

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G I  A ++F+ M ++++V+WT +I G   HG A +A+ LF +M  + +EP+ VA++AVL
Sbjct: 450 GNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVL 509

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           +ACSH+GLV+E+ +YF+ +  D  + P +EHY+ + D LGRAGRL+EA + I  MP+ P+
Sbjct: 510 TACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPT 569

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
            ++W TLLSACRVH ++++  +V   +L +D  N   Y++++NI++ A  W E  + R  
Sbjct: 570 GSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRAS 629

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            R  G++K    SW+EV  +++ F  GD++HP  EKI +  ME+   + E+ G+V     
Sbjct: 630 LRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREA-MEVLMELMEKEGYVPDTSE 688

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
             HD++EE K+  +  HSE+LAI    V G +N   G  IRV KNLRVC DCH   K +S
Sbjct: 689 VHHDVEEEQKKYLVCSHSERLAI----VFGIINTPAGTTIRVTKNLRVCTDCHTATKFIS 744

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KI+    VVRD +RFH F+ G CSCGDYW
Sbjct: 745 KIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 124/216 (57%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   ++N+ +  G ++HG  ++ G   ++ + + LIDMYAKC  +  +  VF  + 
Sbjct: 303 LSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLT 362

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+ +SW +++ G +QNG     L  F QM  + +KP  ++ S+ + A   L+++  G Q
Sbjct: 363 ERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 422

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG   ++GF+ N  + +S++DMY+KCG I  A ++FD M  + +++W AMI G  L G+
Sbjct: 423 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGH 482

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           +   + LF +M+  G  P+   F + L AC   G V
Sbjct: 483 ALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLV 518



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 161/361 (44%), Gaps = 38/361 (10%)

Query: 157 MYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFT 216
           +YS    ++++ R+F+ +     + W ++I  Y   G   K L  F  M   G  PD   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE------- 269
           F S LKAC  L  +  G  +HG++I  G  + + T    +L++ Y K   L +       
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYT--GNALMNMYSKLRFLKKSGRQRLG 168

Query: 270 ARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A +V D + E+   +  +S+++G  Q   +++       +  RS + +  VL       +
Sbjct: 169 ASQVLDEMTERTRSVRTASVLVG-NQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRS 227

Query: 329 DFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           ++  +E    G+QI           D S S S          +D   ++F  MP K++V+
Sbjct: 228 EYREMEACNLGQQIK----------DISHSMS----------VDSVRKIFEMMPEKDLVS 267

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  II G  ++GL  E + + R+M   +++PD     +VL   + +  + + +E     C
Sbjct: 268 WNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHG--C 325

Query: 446 NDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
           + ++ +   +   S ++D   +  R+ ++  +   +  +  I+ W ++++ C  +G  + 
Sbjct: 326 SIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGIS-WNSIIAGCVQNGLFDE 384

Query: 505 G 505
           G
Sbjct: 385 G 385



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 23/114 (20%), Positives = 58/114 (50%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           +Y+    ++ +  +F+ +     ++W +++  +  +G     L  F  M +S + P+   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             + +KA  +L  +  G  +HG  ++ G +++   GN++++MYSK   + ++ R
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGR 164


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/676 (35%), Positives = 391/676 (57%), Gaps = 20/676 (2%)

Query: 31  GVQL-HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G Q+ HG ++K G   +  + + L+++YAKCG M  A  VF+ M  RNVV+WT LM GF+
Sbjct: 82  GTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFV 141

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QN   K  + +F +M  +   P+ +TLS  + A   L S++ G Q H   +K   +++  
Sbjct: 142 QNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTS 201

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG+++  +YSKCGR+ +A + F  +  K++I+W + ++     G   KGL LF +M    
Sbjct: 202 VGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISED 261

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+EFT TS L  C  + S+  GTQ+    I  G+  +++  +  SL+  Y+K G +VE
Sbjct: 262 IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLR--VRNSLLYLYLKSGFIVE 319

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQ-----EENLA------EAMELFRQLRERSLQVDGF 318
           A R F+ ++  S+++W+++I G+AQ     ++NL+      EA+++F +L +  ++ D F
Sbjct: 320 AHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLF 379

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            LSS++ V +    +EQG+QIHA   K     D  VS S++ MY KCG I+ A++ F EM
Sbjct: 380 TLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEM 439

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             + ++ WT +ITG+ +HG++++A+ +F  M L  V P+ V ++ VLSACSH+G+V ++ 
Sbjct: 440 STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQAL 499

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +    ++KP ++HY C+VD   R GRL++A N I+ M  +PS  IW   ++ CR 
Sbjct: 500 NYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRS 559

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+LELG    E LL L   +P  YV++ N++  A  +++  R+RK+   + + K+   S
Sbjct: 560 HGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWS 619

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+ +  +++ F   D THP +  I + L ++  + K  LG+       + D +EE K  S
Sbjct: 620 WISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAK-NLGYEMLESVEISDEEEEEKTSS 678

Query: 619 LRV-HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
             + HSEKLAI   L     N  P   IRV K+  +C D H FIK +S +     +V+D+
Sbjct: 679 PTIYHSEKLAITFGL-ENLPNSSP---IRVVKSTLICRDSHNFIKCVSTLTGREIIVKDS 734

Query: 678 TRFHRFEGGVCSCGDY 693
            R H+F  G CSCG++
Sbjct: 735 KRLHKFVNGECSCGNF 750



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 213/428 (49%), Gaps = 22/428 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L  G Q H  ++K    FD  + + L  +Y+KCG +  A   F ++ 
Sbjct: 168 LSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR 227

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NV+SWT+ +     NG     L LF +M S  +KPNEFTL++ +     + S+E G Q
Sbjct: 228 EKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQ 287

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV---- 190
           +  +C+K G+E N  V NS++ +Y K G I EA R F+ M   S++TWNAMIAG+     
Sbjct: 288 VCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMME 347

Query: 191 -------LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
                        + L +F K+ + G  PD FT +S L  C  + ++  G QIH   I +
Sbjct: 348 LTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 407

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           GF   V  +++ SL+  Y KCG +  A + F  +  +++I+W+S+I G++Q     +A+ 
Sbjct: 408 GFLSDV--IVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALH 465

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVD 360
           +F  +    ++ +      ++   +   +V Q     +I     K+   +D      +VD
Sbjct: 466 IFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDH--YECMVD 523

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DG 418
           M+++ G +++A     +M  + +   W+  I G   HG     +G +    L  ++P D 
Sbjct: 524 MFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHG--NLELGFYASEQLLSLKPKDP 581

Query: 419 VAYLAVLS 426
             Y+ +L+
Sbjct: 582 ETYVLLLN 589


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/709 (33%), Positives = 391/709 (55%), Gaps = 33/709 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           L+ C+    L   +Q+H  L ++G + D      L+D Y KCG    A  VFD+M E   
Sbjct: 59  LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV 118

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQM-------GSSSVKPNEFTLSTNIKASGV---L 126
           +VVSWTAL+  +  NG        F +M       GS     +  +L   + A  V    
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNA 184
           + +  G  +HG+ +K GF  +  +GNS++ MYS C  +  A R+F+ +P   + +++WN+
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEI---PDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           +I+G+ L G +++ L  F  M   G     P+  T  + LK+C  LG V   + +H ++ 
Sbjct: 239 LISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298

Query: 242 T--SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +  S    +   V+  +L+D + +CG L  AR +FD +E K+V+ WS++I GY Q     
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358

Query: 300 EAMELFRQLRER------SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           EA+ LFRQ+          ++ +   L S++   +          IH YA       D  
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418

Query: 354 VSNSIVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           ++++++DM  KCG I+   ++F+EM    + VV+W+ +I   G HG  K A+ LF +M  
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
              EP+ + Y++VLSACSH+GLVE+ +  F+ +  D  M P  +HY+C+VD LGRAG LD
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           EA N+I +MP+K  +A+W +LL+AC +HG+ +LG  V + +L LD ++  ++V+++N++ 
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           DAG W++  R+R   R  GL+K+ G+S++E+  E++ F   D +HP +E I++ L  +++
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV------RGGLNEQPGKVI 645
           R+++   +V      + D          + HSE+LAI   L+          + +    I
Sbjct: 659 RVRKAAKYVTETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPI 718

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH + K +SK++    +VRDA RFH F  G CSCGDYW
Sbjct: 719 RITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 231/492 (46%), Gaps = 39/492 (7%)

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++   W +L+       N +  L+ F +M + +V  N FT    +KA   L  +   +Q
Sbjct: 15  HKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS--LITWNAMIAGYVLA 192
           +H    + G   +     +++D Y KCG    AA++FD MP  S  +++W A+I+ Y   
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 193 GYSDKGLLLFRKMQ-----EHGEI--PDEFTFTSTLKACG-SLGS--VGGGTQIHGFLIT 242
           G  D+    F +M+     +  E    D  +  + + AC    GS  +  G+ +HG ++ 
Sbjct: 134 GCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAE 300
            GF   V T +  S+V  Y  C  +  A RVF+   IEQ+ V+SW+SLI G+        
Sbjct: 194 YGF--GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAER 251

Query: 301 AMELFRQLRER---SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL----DTS 353
           A+  F  +      +++ +   + +++   A+   VE    +H Y +   S L    D  
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD- 412
           V  +++DM+ +CG +  A E+F+ +  KNVV W+ +I GY +    +EA+ LFR+ML++ 
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 413 -----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
                +V+P+ V  ++V++ACS  G    S     +      +       S ++D   + 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLG-ASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 468 GRLDEAKNLIESMPVKP-SIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNP--VN 522
           G ++  + +   M     ++  W +++ A  +HG+   G+   E+   +R  G  P  + 
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFSEMRTGGYEPNEIT 487

Query: 523 YVMMSNIHADAG 534
           Y+ + +  + AG
Sbjct: 488 YISVLSACSHAG 499



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 10/162 (6%)

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           I  K    W+SLI   A + N   A+  F +++  ++  + F   +++   A    +   
Sbjct: 13  ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP--VKNVVTWTVIITGYG 394
            Q+HAY  ++    D   + ++VD Y KCG    A ++F+EMP    +VV+WT +I+ Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 395 KHGLAKEAVGLFRKML----LDDVEPDGVAYL---AVLSACS 429
            +G   EA   F +M      D  E  GV  +   A++SAC+
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACA 173


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/693 (35%), Positives = 376/693 (54%), Gaps = 80/693 (11%)

Query: 45  FDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FD+M + D      +I  YA  G +N A  +F +   R+ ++W++L+ G+ + G     L
Sbjct: 64  FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEAL 123

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            LF +M     +PN+FT  + ++   +   +E G QIH   +K+ F+ N  V   ++DMY
Sbjct: 124 ELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMY 183

Query: 159 SKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           +KC  I EA  +F++ P K + + W AM+ GY   G   K +  FR M+  G   ++FTF
Sbjct: 184 AKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTF 243

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S L ACGS+ + G G Q+HG ++ SGF  +V   +  +LVD Y KCG L  ARR+ + +
Sbjct: 244 PSILTACGSISACGFGAQVHGCIVRSGFGANV--FVGSALVDMYSKCGDLSNARRMLETM 301

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           E    +SW+S+I+G  ++    EA+ LFR +  R +++D F   S+              
Sbjct: 302 EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL-------------- 347

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
                           V+N++VDMY K G  D A ++F +M  K+V++WT ++TG   +G
Sbjct: 348 ----------------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNG 391

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS--------GLVEES------------ 437
             +EA+ LF +M +  + PD +   AVLSA  +S        G +E++            
Sbjct: 392 SYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDV 451

Query: 438 ----------------QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
                           ++YF  +     +KP  EHY+C++D LGR+G+L EAK L+  M 
Sbjct: 452 ITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA 511

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           V+P   +W+ LL+ACRVHG++ELG      L  L+  N V YV++SN+++ AG W E  +
Sbjct: 512 VQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 571

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
            R+L + +G+ K  G SW+E+  ++H F   D +HP T +I+  + E+   +KE  G+V 
Sbjct: 572 TRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEA-GYVP 630

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
            + +ALHD+ EE KE  L  HSEKLA+   L    L   PG  IR+FKNLR+CGDCH  +
Sbjct: 631 DMNFALHDMDEEGKELGLAYHSEKLAVAFGL----LTMPPGAPIRIFKNLRICGDCHTAM 686

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +S +     ++RD+  FH F  G CSC DYW
Sbjct: 687 KYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 66/384 (17%)

Query: 152 NSIIDMYSKCGRINEAARMFDVM-------------------------------PAKSLI 180
           N ++   SKCGR+++A ++FDVM                               P +S I
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           TW+++I+GY   G   + L LF +MQ  GE P++FT+ S L+ C     +  G QIH   
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLA 299
           I + F  S   V+ G LVD Y KC C++EA  +F+L  ++++ + W++++ GY+Q  +  
Sbjct: 165 IKTQFD-SNAFVVTG-LVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGH 222

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           +A+E FR +R   ++ + F   S++      +    G Q+H    +   G +  V +++V
Sbjct: 223 KAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALV 282

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY KCG +  A  +   M V + V+W  +I G  + GL +EA+ LFR M L  ++ D  
Sbjct: 283 DMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEF 342

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            Y ++++                               + +VD   + G  D A ++ E 
Sbjct: 343 TYPSLVN-------------------------------NALVDMYAKRGYFDYAFDVFEK 371

Query: 480 MPVKPSIAIWQTLLSACRVHGDLE 503
           M  K  I+ W +L++ C  +G  E
Sbjct: 372 MTDKDVIS-WTSLVTGCVHNGSYE 394



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 187/412 (45%), Gaps = 100/412 (24%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q+HG +V+ GF  ++ + + L+DMY+KCG+++ A  + + M   + VSW +++ G +
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G  +  LSLF  M    +K +EFT  +                              +
Sbjct: 318 RQGLGEEALSLFRIMHLRHMKIDEFTYPS------------------------------L 347

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+++DMY+K G  + A  +F+ M  K +I+W +++ G V  G  ++ L LF +M+  G
Sbjct: 348 VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 407

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD+    + L A                             +  SLV  Y KCGC+ +
Sbjct: 408 IHPDQIVIAAVLSA-----------------------------LDNSLVSMYAKCGCIED 438

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A +VFD +E + VI+W++LI+GYAQ        + F+ + E               V+  
Sbjct: 439 ANKVFDSMEIQDVITWTALIVGYAQN---GRGRDYFQSMEE---------------VYG- 479

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTV 388
              ++ G + +A                ++D+  + G + EA EL N+M V+ +   W  
Sbjct: 480 ---IKPGPEHYA---------------CMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 521

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEESQE 439
           ++     HG  +  +G      L ++EP + V Y+ + +  S +G  EE+ +
Sbjct: 522 LLAACRVHGNVE--LGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAK 571



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 45/326 (13%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           +T + K C  L        I  F+ + G  +S     +  ++    KCG + +AR++FD+
Sbjct: 9   YTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSD--SNWVLSNLSKCGRVDDARKLFDV 66

Query: 277 IEQ-------------------------------KSVISWSSLILGYAQEENLAEAMELF 305
           +                                 +S I+WSSLI GY +     EA+ELF
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            +++    + + F   S++ V + + L+E+GKQIHA+A K     +  V   +VDMY KC
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 366 GLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             I EA  LF   P K N V WT ++TGY ++G   +A+  FR M  + +E +   + ++
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 425 LSAC---SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L+AC   S  G   +      R          +   S +VD   + G L  A+ ++E+M 
Sbjct: 247 LTACGSISACGFGAQVHGCIVR----SGFGANVFVGSALVDMYSKCGDLSNARRMLETME 302

Query: 482 VKPSIAIWQTLLSACRVHGDLELGRE 507
           V   ++ W +++  C   G   LG E
Sbjct: 303 VDDPVS-WNSMIVGCVRQG---LGEE 324



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 33/272 (12%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           F++  ++NN L+DMYAK G  + A  VF+KM +++V+SWT+L+ G + NG+ +  L LFC
Sbjct: 342 FTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFC 401

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M    + P++  +      + VLS+++                     NS++ MY+KCG
Sbjct: 402 EMRIMGIHPDQIVI------AAVLSALD---------------------NSLVSMYAKCG 434

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTL 221
            I +A ++FD M  + +ITW A+I GY   G   +G   F+ M+E +G  P    +   +
Sbjct: 435 CIEDANKVFDSMEIQDVITWTALIVGYAQNG---RGRDYFQSMEEVYGIKPGPEHYACMI 491

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
              G  G +    ++   +         K ++A   V   V+ G    A  +F+L E K+
Sbjct: 492 DLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELG-ERAANNLFEL-EPKN 549

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            + +  L   Y+      EA +  R ++ R +
Sbjct: 550 AVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 581



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 36/220 (16%)

Query: 352 TSVSNSIVDMYLKCGLIDEATELFN-------------------------------EMPV 380
           +S SN ++    KCG +D+A +LF+                               E P+
Sbjct: 41  SSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPI 100

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           ++ +TW+ +I+GY ++G   EA+ LF +M  +   P+   + +VL  CS   L+E+ ++ 
Sbjct: 101 RSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI 160

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            +      +        + +VD   +   + EA+ L E  P K +  +W  +++    +G
Sbjct: 161 HAHAIK-TQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNG 219

Query: 501 DLELGREVGEILLRLDGDN-PVNYVMMSNIHADAGSWNEC 539
           D   G +  E    + G+    N     +I    GS + C
Sbjct: 220 D---GHKAIECFRDMRGEGIECNQFTFPSILTACGSISAC 256


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 382/698 (54%), Gaps = 43/698 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q HG +++ G   D    + L  M A      +  A  VFD++ + N  +W  L+  +  
Sbjct: 48  QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107

Query: 91  NGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             +    +  F  M S S   PN++T    IKA+  +SS+  G  +HGM +KS    +  
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS+I  Y  CG ++ A ++F  +  K +++WN+MI G+V  G  DK L LF+KM+   
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                 T    L AC  + ++  G Q+  ++  +    +V   +A +++D Y KCG + +
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRV--NVNLTLANAMLDMYTKCGSIED 285

Query: 270 ARRVFDLIE-------------------------------QKSVISWSSLILGYAQEENL 298
           A+R+FD +E                               QK +++W++LI  Y Q    
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345

Query: 299 AEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA+ +F +L+ +++++++   L S +   A    +E G+ IH+Y  K    ++  V+++
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ MY KCG ++++ E+FN +  ++V  W+ +I G   HG   EAV +F KM   +V+P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
           GV +  V  ACSH+GLV+E++  F ++ ++  + P  +HY+CIVD LGR+G L++A   I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           E+MP+ PS ++W  LL AC++H +L L       LL L+  N   +V++SNI+A  G W 
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
               LRK  R  GLKK  G S +E+D  IH F  GD+ HP++EK++  L E+ +++K   
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN- 644

Query: 598 GFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           G+   +   L  I+EE  KE+SL +HSEKLAI   L+     E P KVIRV KNLRVCGD
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS---TEAP-KVIRVIKNLRVCGD 700

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH   K +S++     +VRD  RFH F  G CSC D+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 195/389 (50%), Gaps = 41/389 (10%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  LHG  VK     D+ + N LI  Y  CG+++ AC VF  + E++VVSW +++ G
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F+Q G+    L LF +M S  VK +  T+   + A   + ++E G Q+     ++    N
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDV-------------------------------MPA 176
             + N+++DMY+KCG I +A R+FD                                MP 
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQ 235
           K ++ WNA+I+ Y   G  ++ L++F ++Q    +  ++ T  STL AC  +G++  G  
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           IH ++   G   +    +  +L+  Y KCG L ++R VF+ +E++ V  WS++I G A  
Sbjct: 387 IHSYIKKHGIRMNFH--VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK----QIHAYAAKVPSGLD 351
               EA+++F +++E +++ +G   +++    +   LV++ +    Q+ +    VP    
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            +    IVD+  + G +++A +    MP+
Sbjct: 505 YAC---IVDVLGRSGYLEKAVKFIEAMPI 530



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 197/410 (48%), Gaps = 20/410 (4%)

Query: 111 PNEFTLSTNIKASGVLSSVENGM------QIHGMCMKSGFEWNPVVGNSIIDM--YSKCG 162
           PN+ T  TN + S  +S +E  +      Q HG  +++G   +P   + +  M   S   
Sbjct: 21  PNQPT--TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTL 221
            +  A ++FD +P  +   WN +I  Y         +  F  M    +  P+++TF   +
Sbjct: 79  SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           KA   + S+  G  +HG  + S     V   +A SL+  Y  CG L  A +VF  I++K 
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDV--FVANSLIHCYFSCGDLDSACKVFTTIKEKD 196

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           V+SW+S+I G+ Q+ +  +A+ELF+++    ++     +  ++   A    +E G+Q+ +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           Y  +    ++ +++N+++DMY KCG I++A  LF+ M  K+ VTWT ++ GY       E
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA----ISE 312

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
                R++L    + D VA+ A++SA   +G   E+   F  L   K MK         +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372

Query: 462 DSLGRAGRLDEAK---NLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            +  + G L+  +   + I+   ++ +  +   L+      GDLE  REV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 32/244 (13%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--- 75
           L  C+K   L++G Q+   + +   + +L L N ++DMY KCG +  A  +FD M E   
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298

Query: 76  ----------------------------RNVVSWTALMCGFLQNGNAKACLSLFCQMG-S 106
                                       +++V+W AL+  + QNG     L +F ++   
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            ++K N+ TL + + A   + ++E G  IH    K G   N  V +++I MYSKCG + +
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           +  +F+ +  + +  W+AMI G  + G  ++ + +F KMQE    P+  TFT+   AC  
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478

Query: 227 LGSV 230
            G V
Sbjct: 479 TGLV 482



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 8/179 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C++   L+ G  +H  + K G   +  + + LI MY+KCG++  +  VF+ + 
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI----KASGVLSSVE 130
           +R+V  W+A++ G   +G     + +F +M  ++VKPN  T  TN+      +G++   E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF-TNVFCACSHTGLVDEAE 486

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
           +    H M    G          I+D+  + G + +A +  + MP   S   W A++  
Sbjct: 487 S--LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/649 (34%), Positives = 363/649 (55%), Gaps = 41/649 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D+   N ++  Y+K G +    AVFD+M   + VS+  ++ GF  NG +   L  F +M 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
               +  ++T  + + A   L  ++ G QIHG  + +    +  V N++ +MY+KCG ++
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A  +FD M  K++++WN+MI+GY+  G  +    LF +MQ  G +PD+ T ++ L A  
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
                                              Y +CG + EA + F  I++K  + W
Sbjct: 266 -----------------------------------YFQCGYIDEACKTFREIKEKDKVCW 290

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++++G AQ     +A+ LFR++   +++ D F +SS++   A  A + QG+ +H  A  
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVI 350

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                D  VS+++VDMY KCG   +A  +F  M  +NV++W  +I GY ++G   EA+ L
Sbjct: 351 FGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALAL 410

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           + +ML ++++PD + ++ VLSAC H+GLVE  Q YF  +     M P  +HYSC+++ LG
Sbjct: 411 YEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLG 470

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG +D+A +LI+SM  +P+  IW TLLS CR++ D+  G      L  LD  N   Y+M
Sbjct: 471 RAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIM 530

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SNI+A  G W +   +R L ++  +KK A  SW+E+D ++H F   D TH  TE+I++ 
Sbjct: 531 LSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEE 590

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L  + K+++E  GF       LHD+ EE K +S+  HSEKLA+   L++      P   I
Sbjct: 591 LNRLIKKLQES-GFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTP---I 646

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KN+RVCGDCH F+K +SKI++   ++RD  RFH F  G CSC D W
Sbjct: 647 RIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 41/376 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS+ L +  G Q+HG +V       + + N L +MYAKCG ++ A  +FD+M+ +NV
Sbjct: 162 LHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNV 221

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+LQNG  + C  LFC+M SS + P++ T+S                     
Sbjct: 222 VSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTIS--------------------- 260

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                         +I+  Y +CG I+EA + F  +  K  + W  M+ G    G  +  
Sbjct: 261 --------------NILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDA 306

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLFR+M      PD FT +S + +C  L S+  G  +HG  +  G  + +  +++ +LV
Sbjct: 307 LLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL--LVSSALV 364

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG   +A  VF  +  ++VISW+S+ILGYAQ     EA+ L+ ++   +L+ D  
Sbjct: 365 DMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNI 424

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++       LVE+G Q + Y+     G++ +  +   ++++  + G +D+A +L  
Sbjct: 425 TFVGVLSACMHAGLVERG-QGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIK 483

Query: 377 EMPVK-NVVTWTVIIT 391
            M  + N + W+ +++
Sbjct: 484 SMTFEPNCLIWSTLLS 499


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/662 (35%), Positives = 372/662 (56%), Gaps = 41/662 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            +H  +  + F  +  L   L+  YA  GE   A  VFD + ERNV+ +  ++  ++ N 
Sbjct: 53  NVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNH 112

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L +F  M S    P+ +T    +KA     ++  G+Q+HG   K G + N  VGN
Sbjct: 113 LYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGN 172

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +I +Y KCG + EA  + D M +K +++WN+M+AGY      D  L + R+M    + P
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L A  +  S                                     ++    
Sbjct: 233 DACTMASLLPAVTNTSSEN-----------------------------------VLYVEE 257

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  +E+KS++SW+ +I  Y +     ++++L+ Q+ +  ++ D    +S++    D + 
Sbjct: 258 MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSA 317

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  G++IH Y  +     +  + NS++DMY +CG +++A  +F+ M  ++V +WT +I+ 
Sbjct: 318 LLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISA 377

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG  G    AV LF +M      PD +A++A+LSACSHSGL+ E + YF ++ +D ++ P
Sbjct: 378 YGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITP 437

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            IEH++C+VD LGR+GR+DEA N+I+ MP+KP+  +W  LLS+CRV+ ++++G    + L
Sbjct: 438 IIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKL 497

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L+L  +    YV++SNI+A AG W E   +R L + + ++K+ G S VE++ ++H F  G
Sbjct: 498 LQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAG 557

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP +++I++ L  +  +MK ELG+V     ALHD++EE KE  L VHSEKLAI  A+
Sbjct: 558 DTYHPQSKEIYEELSVLVGKMK-ELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAI 616

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
               LN Q    IR+ KNLRVCGDCH   K +SKI++   V+RD  RFH F+ G+CSCGD
Sbjct: 617 ----LNTQESP-IRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGD 671

Query: 693 YW 694
           YW
Sbjct: 672 YW 673



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 193/415 (46%), Gaps = 49/415 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  L  G+QLHGA+ K+G   +L + N LI +Y KCG +  A  V D+M  ++V
Sbjct: 140 LKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDV 199

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G+ QN      L +  +M     KP+  T+++ + A    SS EN + +  M
Sbjct: 200 VSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS-ENVLYVEEM 258

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            M                                 +  KSL++WN MI+ Y+      K 
Sbjct: 259 FMN--------------------------------LEKKSLVSWNVMISVYMKNSMPGKS 286

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L+ +M +    PD  T  S L+ACG L ++  G +IH ++           ++  SL+
Sbjct: 287 VDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKL--CPNMLLENSLI 344

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y +CGCL +A+RVFD ++ + V SW+SLI  Y        A+ LF +++      D  
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI------VDMYLKCGLIDEAT 372
              +++   +   L+ +GK    Y  ++    D  ++  I      VD+  + G +DEA 
Sbjct: 405 AFVAILSACSHSGLLNEGK---FYFKQMTD--DYKITPIIEHFACLVDLLGRSGRVDEAY 459

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +  +MP+K N   W  +++    +  +   +G+     L  + P+   Y  +LS
Sbjct: 460 NIIKQMPMKPNERVWGALLSSCRVY--SNMDIGILAADKLLQLAPEESGYYVLLS 512



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 10/196 (5%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C     L  G ++H  + +     +++L N LIDMYA+CG +  A  VFD+M  
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKF 365

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENG 132
           R+V SWT+L+  +   G     ++LF +M +S   P+       + A   SG+L    N 
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLL----NE 421

Query: 133 MQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGY 189
            + +   M   ++  P++ +   ++D+  + GR++EA  +   MP K +   W A+++  
Sbjct: 422 GKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSC 481

Query: 190 VLAGYSDKGLLLFRKM 205
            +    D G+L   K+
Sbjct: 482 RVYSNMDIGILAADKL 497



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%)

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           S Q    VL  +  V   +  ++  K +H+    +    + S+   ++  Y   G    A
Sbjct: 27  SPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLA 86

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ +P +NV+ + V+I  Y  + L  +A+ +FR M+     PD   Y  VL ACS S
Sbjct: 87  RNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCS 146


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/797 (31%), Positives = 408/797 (51%), Gaps = 114/797 (14%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGV--QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S+ +   R    L+ C     + Y +   +H  ++  GF     + N LID+Y+K  ++N
Sbjct: 6   SIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLN 65

Query: 65  GACAVFDKMLERNVVS---------------------------------WTALMCGFLQN 91
            A  +FD++ + ++V+                                 + A++  +  N
Sbjct: 66  YARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHN 125

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE-NGMQIHGMCMKSGFEWNPVV 150
            +  A + LFC M   + +P+ +T ++ + A  +++  E +  Q+H   +KSG  +   V
Sbjct: 126 HDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSV 185

Query: 151 GNSIIDMYSKCGR---------INEAARMFDVMPAKSLITWNAMIAGYV----------- 190
            N++I  Y KC           + EA ++FD MP +  ++W  +I GYV           
Sbjct: 186 LNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEF 245

Query: 191 ---------------LAGYSDKGLLL-----FRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
                          ++GY+ +GL L     FRKM       DEFTFTS +  C + G  
Sbjct: 246 LNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCF 305

Query: 231 GGGTQIHG-FLITSGFPYS-VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
             G ++H  FL T   P   V   +  +L+ FY KCG +  A+ +F+ + ++ ++SW+ +
Sbjct: 306 RLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNII 365

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV-FADFAL--------------- 332
           + GY     + EA   F ++ E+++     ++S +  + FA+ AL               
Sbjct: 366 LSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCD 425

Query: 333 ---------------VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
                          ++ G+Q+HA   +       S  N+++ MY +CG++D A  LF  
Sbjct: 426 YAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFIN 485

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP  + ++W  +I   G+HG   +A+ LF +ML + + PD +++L V+SACSH+GLV+E 
Sbjct: 486 MPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEG 545

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           ++YF  + N   + P  EHY+ I+D L RAG+  EAK ++ESMP +P   IW+ LL+ CR
Sbjct: 546 RKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCR 605

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +HG+++LG E  E L  L   +   YV++SN++A AG WN+  ++RKL R +G+KK  G 
Sbjct: 606 IHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGC 665

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+EV+ ++H F  GD  HP   +I+  L ++   M+ ++G+V   K  LHD++ + KE 
Sbjct: 666 SWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMR-KIGYVPDTKCVLHDVESDLKEH 724

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSEKLA+      G +    G  +RVFKNLR+CGDCH   K +SK++    VVRD 
Sbjct: 725 ELSTHSEKLAVAY----GFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDG 780

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F  G CSCGDYW
Sbjct: 781 KRFHHFRDGKCSCGDYW 797


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/644 (37%), Positives = 358/644 (55%), Gaps = 15/644 (2%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY+K      A  V      RNVVSWT+L+ G  QNG+    L  F +M    V PN+FT
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                KA   L     G QIH + +K G   +  VG S  DMY K    ++A ++FD +P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGL---LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            ++L TWNA I+  V  G   + +   + FR++  H   P+  TF + L AC     +  
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH---PNSITFCAFLNACSDWLHLNL 177

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G Q+HG ++ SGF   V   +   L+DFY KC  +  +  +F  +  K+ +SW SL+  Y
Sbjct: 178 GMQLHGLVLRSGFDTDVS--VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY 235

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
            Q     +A  L+ + R+  ++   F++SS++   A  A +E G+ IHA+A K       
Sbjct: 236 VQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI 295

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V +++VDMY KCG I+++ + F+EMP KN+VT   +I GY   G    A+ LF +M   
Sbjct: 296 FVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 355

Query: 413 DV--EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
                P+ + ++++LSACS +G VE   + F  + +   ++P  EHYSCIVD LGRAG +
Sbjct: 356 GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 415

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
           + A   I+ MP++P+I++W  L +ACR+HG  +LG    E L +LD  +  N+V++SN  
Sbjct: 416 ERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTF 475

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           A AG W E   +R+  +  G+KK AG SW+ V  ++H F   D +H L ++I   L ++ 
Sbjct: 476 AAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR 535

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
             M E  G+   +K +L+D++EE K   +  HSEKLA+   L+   L+      IR+ KN
Sbjct: 536 NEM-EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP----IRITKN 590

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LR+CGDCH F K +S  +K   +VRD  RFHRF+ G+CSC DYW
Sbjct: 591 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 194/402 (48%), Gaps = 12/402 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   VK G   D+ +     DMY K    + A  +FD++ ERN+ +W A +   + 
Sbjct: 77  GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G  +  +  F +       PN  T    + A      +  GMQ+HG+ ++SGF+ +  V
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N +ID Y KC +I  +  +F  M  K+ ++W +++A YV     +K  +L+ + ++   
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 256

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
              +F  +S L AC  +  +  G  IH   + +      +T+  GS LVD Y KCGC+ +
Sbjct: 257 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE---RTIFVGSALVDMYGKCGCIED 313

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL--QVDGFVLSSMMGVF 327
           + + FD + +K++++ +SLI GYA +  +  A+ LF ++  R      +     S++   
Sbjct: 314 SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 373

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           +    VE G +I   + +   G++    +   IVDM  + G+++ A E   +MP++  ++
Sbjct: 374 SRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 432

Query: 386 -WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            W  +      HG  K  +GL     L  ++P       +LS
Sbjct: 433 VWGALQNACRMHG--KPQLGLLAAENLFKLDPKDSGNHVLLS 472



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 2/220 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS  L L+ G+QLHG +++ GF  D+ + N LID Y KC ++  +  +F +M  +N 
Sbjct: 166 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 225

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+  ++QN   +    L+ +     V+ ++F +S+ + A   ++ +E G  IH  
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 285

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  E    VG++++DMY KCG I ++ + FD MP K+L+T N++I GY   G  D  
Sbjct: 286 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 345

Query: 199 LLLFRKMQEH--GEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           L LF +M     G  P+  TF S L AC   G+V  G +I
Sbjct: 346 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 6/191 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C+    L+ G  +H   VK      + + + L+DMY KCG +  +   FD+M 
Sbjct: 263 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKASGVLSSVENG 132
           E+N+V+  +L+ G+   G     L+LF +M        PN  T  + + A     +VENG
Sbjct: 323 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 382

Query: 133 MQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGY 189
           M+I    M+S +   P   +   I+DM  + G +  A      MP +  I+ W A+    
Sbjct: 383 MKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 441

Query: 190 VLAGYSDKGLL 200
            + G    GLL
Sbjct: 442 RMHGKPQLGLL 452


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/709 (33%), Positives = 391/709 (55%), Gaps = 33/709 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           L+ C+    L   +Q+H  L ++G + D      L+D Y KCG    A  VFD+M E   
Sbjct: 59  LKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV 118

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQM-------GSSSVKPNEFTLSTNIKASGV---L 126
           +VVSWTAL+  +  NG        F +M       GS     +  +L   + A  V    
Sbjct: 119 DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS 178

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNA 184
           + +  G  +HG+ +K GF  +  +GNS++ MYS C  +  A R+F+ +P   + +++WN+
Sbjct: 179 NCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNS 238

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEI---PDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           +I+G+ L G +++ L  F  M   G     P+  T  + LK+C  LG V   + +H ++ 
Sbjct: 239 LISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298

Query: 242 T--SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +  S    +   V+  +L+D + +CG L  AR +FD +E K+V+ WS++I GY Q     
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358

Query: 300 EAMELFRQLRER------SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           EA+ LFRQ+          ++ +   L S++   +          IH YA       D  
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418

Query: 354 VSNSIVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           ++++++DM  KCG I+   ++F+EM    + VV+W+ +I   G HG  K A+ LF +M  
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
              EP+ + Y++VLSACSH+GLVE+ +  F+ +  D  M P  +HY+C+VD LGRAG LD
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           EA N+I +MP+K  +A+W +LL+AC +HG+ +LG  V + +L LD ++  ++V+++N++ 
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           DAG W++  R+R   R  GL+K+ G+S++E+  E++ F   D +HP +E I++ L  +++
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV------RGGLNEQPGKVI 645
           R+++   +V      + D          + HSE+LAI   L+          + +    I
Sbjct: 659 RVRKAAKYVTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPI 718

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH + K +SK++    +VRDA RFH F  G CSCGDYW
Sbjct: 719 RITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 231/492 (46%), Gaps = 39/492 (7%)

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++   W +L+       N +  L+ F +M + +V  N FT    +KA   L  +   +Q
Sbjct: 15  HKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS--LITWNAMIAGYVLA 192
           +H    + G   +     +++D Y KCG    AA++FD MP  S  +++W A+I+ Y   
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 193 GYSDKGLLLFRKMQ-----EHGEI--PDEFTFTSTLKACG-SLGS--VGGGTQIHGFLIT 242
           G  D+    F +M+     +  E    D  +  + + AC    GS  +  G+ +HG ++ 
Sbjct: 134 GCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAE 300
            GF   V T +  S+V  Y  C  +  A RVF+   IEQ+ V+SW+SLI G+        
Sbjct: 194 YGF--GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAER 251

Query: 301 AMELFRQLRER---SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL----DTS 353
           A+  F  +      +++ +   + +++   A+   VE    +H Y +   S L    D  
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD- 412
           V  +++DM+ +CG +  A E+F+ +  KNVV W+ +I GY +    +EA+ LFR+ML++ 
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 413 -----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
                +V+P+ V  ++V++ACS  G    S     +      +       S ++D   + 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLG-ASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 468 GRLDEAKNLIESMPVKP-SIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNP--VN 522
           G ++  + +   M     ++  W +++ A  +HG+   G+   E+   +R  G  P  + 
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALELFSEMRTGGYEPNEIT 487

Query: 523 YVMMSNIHADAG 534
           Y+ + +  + AG
Sbjct: 488 YISVLSACSHAG 499



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 10/162 (6%)

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           I  K    W+SLI   A + N   A+  F +++  ++  + F   +++   A    +   
Sbjct: 13  ISHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP--VKNVVTWTVIITGYG 394
            Q+HAY  ++    D   + ++VD Y KCG    A ++F+EMP    +VV+WT +I+ Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 395 KHGLAKEAVGLFRKML----LDDVEPDGVAYL---AVLSACS 429
            +G   EA   F +M      D  E  GV  +   A++SAC+
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACA 173


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/664 (35%), Positives = 384/664 (57%), Gaps = 13/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            +   ++K GF  +L   + L+D   KCGE+  A  +FD M ER++V+W +++  ++++ 
Sbjct: 68  NIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHR 126

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW-NPVVG 151
            +K  + ++  M S++V P+E+TLS+  KA   LS  +   + HG+ +  G E  N  VG
Sbjct: 127 RSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVG 186

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++++DMY K G+  EA  + D +  K ++   A+I GY   G   + +  F+ M      
Sbjct: 187 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ 246

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P+E+T+ S L +CG+L  +G G  IHG ++ SGF  ++ +    SL+  Y++C  + ++ 
Sbjct: 247 PNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS--QTSLLTMYLRCSLVDDSL 304

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VF  I+  + ++W+SLI G  Q      A+  FR++   S++ + F LSS +   ++ A
Sbjct: 305 LVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLA 364

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           + E+G+Q+H   +K     D    + ++++Y KCG  D A  +F+ +   +V++   +I 
Sbjct: 365 MFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIY 424

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y ++G  +EA+ LF +M+   ++P+ V  L+VL AC++SGLVEE  E F     DK M 
Sbjct: 425 SYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIML 484

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
              +HY+C+VD LGRAGRL+EA+ LI  +   P + +W+TLLSAC+VH  +E+   +   
Sbjct: 485 TN-DHYACMVDMLGRAGRLEEAEMLITEV-TNPDLVLWRTLLSACKVHRKVEMAERITRK 542

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           +L +   +    +++SN++A  G W     ++   +   LKK    SWVE+DKE H F  
Sbjct: 543 ILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMA 602

Query: 572 GD-DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
           GD  +HP +E+I + L E+ K+ K +LG+V        D++E +KE SL  HSEKLAI  
Sbjct: 603 GDLFSHPNSEQILENLEELIKKAK-DLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAF 661

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           A+ R       G  IR+ KNLRVC DCH +IK +S+I+K   + RD+ RFH F  G CSC
Sbjct: 662 AVWR-----NVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSC 716

Query: 691 GDYW 694
           GDYW
Sbjct: 717 GDYW 720



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 2/280 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG +VK GF   L     L+ MY +C  ++ +  VF  +   N V+WT+L+ G +Q
Sbjct: 268 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQ 327

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L  F +M   SVKPN FTLS+ ++    L+  E G Q+HG+  K GF+ +   
Sbjct: 328 NGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYA 387

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G+ +I++Y KCG  + A  +FD +    +I+ N MI  Y   G+  + L LF +M   G 
Sbjct: 388 GSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGL 447

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ T  S L AC + G V  G ++           +        +VD   + G L EA
Sbjct: 448 QPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHY--ACMVDMLGRAGRLEEA 505

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +   +    ++ W +L+        +  A  + R++ E
Sbjct: 506 EMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKILE 545



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 8/216 (3%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           TF+  L+ C    S+ G   I   ++ SGFP  +       LVD  +KCG +  AR++FD
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS---GSKLVDASLKCGEIGYARQLFD 105

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            + ++ +++W+S+I  Y +     EA+E++R +   ++  D + LSS+   F+D +L ++
Sbjct: 106 GMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKE 165

Query: 336 GKQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            ++ H  A  V  GL+ S   V +++VDMY+K G   EA  + + +  K+VV  T +I G
Sbjct: 166 AQRSHGLA--VILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 223

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           Y + G   EAV  F+ ML++ V+P+   Y +VL +C
Sbjct: 224 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC 259


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/564 (36%), Positives = 353/564 (62%), Gaps = 7/564 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +R C++  +++ G QLHG +V+ GF  D+ +   LID Y+K G +  A  VFD++ 
Sbjct: 154 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS 213

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+  V+WT ++ G+ + G +   L LF QM  ++V P+ + +S+ + A  +L  +E G Q
Sbjct: 214 EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 273

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G E +  V N +ID Y+KC R+    ++FD M  K++I+W  MI+GY+   +
Sbjct: 274 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 333

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + LF +M   G  PD F  TS L +CGS  ++  G Q+H + I +         + 
Sbjct: 334 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANL--ESDEFVK 391

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y K   L++A++VFD++ +++VIS++++I GY+ +E L+EA+ELF ++R R  +
Sbjct: 392 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQK 451

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEAT 372
            + F  ++++   ++ A +  G+Q H    K+  GLD    V+N++VDMY KCG I+EA 
Sbjct: 452 PNEFTFAALITAASNLASLRHGQQFHNQLVKM--GLDFCPFVTNALVDMYAKCGSIEEAR 509

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           ++FN    ++VV W  +I+ + +HG A+EA+G+FR+M+ + ++P+ V ++AVLSACSH+G
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            VE+   +F+ +     +KP  EHY+C+V  LGR+G+L EAK  IE MP++P+  +W++L
Sbjct: 570 RVEDGLNHFNSMPGFG-IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 628

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           LSACR+ G++ELG+   E+ +  D  +  +Y+++SNI A  G W + +++R    S  + 
Sbjct: 629 LSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 688

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTH 576
           K  GRSW+EV+ +++ F   D TH
Sbjct: 689 KEPGRSWIEVNNKVNVFIARDTTH 712



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/500 (32%), Positives = 277/500 (55%), Gaps = 9/500 (1%)

Query: 7   SLVSERQRLADSLR-CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           +L  +R+  A+ L+   S+N ++ Y + +HG ++  G   D  L N LI++ +K   ++ 
Sbjct: 44  NLRPKRREFANLLQLSISRNPIIHYKI-IHGQIIVSGLQSDTFLANILINVCSKSDRVDN 102

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASG 124
           A  VFDKM  +N+++W++++  + Q G ++  L +F  +   S + PNEF L++ I+A  
Sbjct: 103 ARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACT 162

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L  VE G Q+HG  ++SGF+ +  VG S+ID YSK G I EA  +FD +  K+ +TW  
Sbjct: 163 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 222

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           +IAGY   G S   L LF +M+E   +PD +  +S L AC  L  + GG QIH +++  G
Sbjct: 223 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               V  V    L+DFY KC  +   R++FD +  K++ISW+++I GY Q     EAM+L
Sbjct: 283 TEMDVSVV--NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 340

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++     + DGF  +S++        +EQG+Q+HAY  K     D  V N ++DMY K
Sbjct: 341 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 400

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             L+ +A ++F+ M  +NV+++  +I GY       EA+ LF +M +   +P+   + A+
Sbjct: 401 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAAL 460

Query: 425 LSACSHSGLVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           ++A S+   +   Q++ ++L        P + +   +VD   + G ++EA+ +  S  + 
Sbjct: 461 ITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIW 517

Query: 484 PSIAIWQTLLSACRVHGDLE 503
             +  W +++S    HG+ E
Sbjct: 518 RDVVCWNSMISTHAQHGEAE 537



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 216/433 (49%), Gaps = 44/433 (10%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           ++V +R  ++  L  CS    L+ G Q+H  +++ G   D+ + N LID Y KC  +   
Sbjct: 247 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 306

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD+M+ +N++SWT ++ G++QN      + LF +M     KP+ F  ++ + + G  
Sbjct: 307 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 366

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            ++E G Q+H   +K+  E +  V N +IDMY+K   + +A ++FDVM  +++I++NAMI
Sbjct: 367 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY       + L LF +M+   + P+EFTF + + A  +L S+  G Q H  L+  G  
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 486

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           +     +  +LVD Y KCG + EAR++F+    + V+ W+S+I  +AQ     EA+ +FR
Sbjct: 487 FC--PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFR 544

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           ++ +  +Q +     +++                ++A +V  GL+               
Sbjct: 545 EMMKEGIQPNYVTFVAVLSAC-------------SHAGRVEDGLNH-------------- 577

Query: 367 LIDEATELFNEMP----VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
                   FN MP          +  +++  G+ G   EA     KM    +EP  + + 
Sbjct: 578 --------FNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKM---PIEPAAIVWR 626

Query: 423 AVLSACSHSGLVE 435
           ++LSAC  +G VE
Sbjct: 627 SLLSACRIAGNVE 639


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/624 (36%), Positives = 366/624 (58%), Gaps = 21/624 (3%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +S   L+    + G  K  + +  Q  S    P++ T    I   G  SS+ + +++H  
Sbjct: 47  ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + +G + +P +   +I MYS  G ++ A ++FD    +++  WNA+     LAG+ ++ 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKAC----GSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           L L+ KM   G   D FT+T  LKAC     ++  +  G +IH  L   G  YS    I 
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG--YSSHVYIM 220

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RE-RS 312
            +LVD Y + GC+  A  VF  +  ++V+SWS++I  YA+     EA+  FR++ RE + 
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDE 370
              +   + S++   A  A +EQGK IH Y  +   GLD+   V +++V MY +CG ++ 
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILR--RGLDSILPVISALVTMYGRCGKLEV 338

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
              +F+ M  ++VV+W  +I+ YG HG  K+A+ +F +ML +   P  V +++VL ACSH
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLVEE +  F  +  D  +KP+IEHY+C+VD LGRA RLDEA  +++ M  +P   +W 
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL +CR+HG++EL       L  L+  N  NYV++++I+A+A  W+E +R++KL   +G
Sbjct: 459 SLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG 518

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           L+K+ GR W+EV ++++ F   D+ +PL E+IH  L+++ + MKE+ G++   K  L+++
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEK-GYIPQTKGVLYEL 577

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           + E KE  +  HSEKLA+   L+    N   G+ IR+ KNLR+C DCH F K +SK ++ 
Sbjct: 578 ETEEKERIVLGHSEKLALAFGLI----NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD  RFHRF+ GVCSCGDYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 11/366 (3%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CC     L   +++H  ++  G   D  L   LI MY+  G ++ A  VFDK  +R +  
Sbjct: 86  CCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV 145

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIH 136
           W AL       G+ +  L L+ +M    V+ + FT +  +KA       ++ +  G +IH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
               + G+  +  +  +++DMY++ G ++ A+ +F  MP +++++W+AMIA Y   G + 
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265

Query: 197 KGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           + L  FR+M  +     P+  T  S L+AC SL ++  G  IHG+++  G   S+  VI+
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD-SILPVIS 324

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  Y +CG L   +RVFD +  + V+SW+SLI  Y       +A+++F ++      
Sbjct: 325 -ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
                  S++G  +   LVE+GK++     +   G+   + +   +VD+  +   +DEA 
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANRLDEAA 442

Query: 373 ELFNEM 378
           ++  +M
Sbjct: 443 KMVQDM 448



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 143/273 (52%), Gaps = 9/273 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ N L+  G ++H  L + G+S  + +   L+DMYA+ G ++ A  VF  M  RNVVSW
Sbjct: 193 CTVNHLMK-GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSW 251

Query: 82  TALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           +A++  + +NG A   L  F +M   +    PN  T+ + ++A   L+++E G  IHG  
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           ++ G +    V ++++ MY +CG++    R+FD M  + +++WN++I+ Y + GY  K +
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSL 257
            +F +M  +G  P   TF S L AC   G V  G ++     T    + +K  I     +
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL---FETMWRDHGIKPQIEHYACM 428

Query: 258 VDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
           VD   +   L EA + V D+  +     W SL+
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G  +HG +++ G    L + + L+ MY +CG++     VFD+M +R+V
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           VSW +L+  +  +G  K  + +F +M ++   P   T  + + A      VE G ++   
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFET 411

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           M    G +        ++D+  +  R++EAA+M   M
Sbjct: 412 MWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/649 (36%), Positives = 369/649 (56%), Gaps = 33/649 (5%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  YA+ G ++ A  VFD+M E+N VSW AL+  ++QN   +    LF   GS   +
Sbjct: 156 NTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF---GS---R 209

Query: 111 PNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            N   +S N    G +     VE       M ++    WN     +II  Y++ G I+EA
Sbjct: 210 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWN-----TIITGYAQNGEIDEA 264

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            ++FD  P   + TW AM++GY+     ++   LF +M E  E+    ++ + L      
Sbjct: 265 RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEV----SWNAMLAGYVQG 320

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
             V    ++   +       +  T+I G     Y +CG + EA+ +FD + ++  +SW++
Sbjct: 321 ERVEMAKELFDVMPCRNVS-TWNTMITG-----YAQCGKISEAKNLFDKMPKRDPVSWAA 374

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I GY+Q  +  EA+ LF  +     +++    SS +   AD   +E GKQ+H    K  
Sbjct: 375 MIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK-- 432

Query: 348 SGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
            G +T   V N+++ MY KCG I+EA +LF EM  K++V+W  +I GY +HG  +EA+  
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRF 492

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M  + ++PD    +AVLSACSH+GLV++ ++YF  +  D  ++P  +HY+C+VD LG
Sbjct: 493 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLG 552

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L+EA NL+++MP +P  AIW TLL A RVHG+ EL     + +  ++ +N   YV+
Sbjct: 553 RAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 612

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A +G W +  +LR   R KG+KKV G SW+E+  + H F  GD+ HP  ++I   
Sbjct: 613 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 672

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L +++ RMK + G+V      LHD++EE KE  +R HSE+LA+   ++R       G+ I
Sbjct: 673 LEDLDLRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR----VSSGRPI 727

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RV KNLRVC DCH  IK ++K+   + ++RD  RFH F+ G CSCGDYW
Sbjct: 728 RVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 193/386 (50%), Gaps = 20/386 (5%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I  YA+ GE++ A  +FD+    +V +WTA++ G++QN   +    LF +M 
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM- 302

Query: 106 SSSVKPNEFTLSTNIKASGVLSS--VENGMQIHG-MCMKSGFEWNPVVGNSIIDMYSKCG 162
                P    +S N   +G +    VE   ++   M  ++   W     N++I  Y++CG
Sbjct: 303 -----PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTW-----NTMITGYAQCG 352

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           +I+EA  +FD MP +  ++W AMIAGY  +G+S + L LF  M+  G   +  +F+S L 
Sbjct: 353 KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALS 412

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            C  + ++  G Q+HG L+  G  Y     +  +L+  Y KCG + EA  +F  +  K +
Sbjct: 413 TCADVVALELGKQLHGRLVKGG--YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 470

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-IHA 341
           +SW+++I GY++     EA+  F  ++   L+ D   + +++   +   LV++G+Q  H 
Sbjct: 471 VSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHT 530

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
                    ++     +VD+  + GL++EA  L   MP + +   W  ++     HG  +
Sbjct: 531 MTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 590

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLS 426
            A     K+    +EP+      +LS
Sbjct: 591 LAETAADKIFA--MEPENSGMYVLLS 614



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 241/548 (43%), Gaps = 74/548 (13%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           L K G S D+   N  I  Y + G  + A  VF +M   + VS+ A++ G+L+NG  +  
Sbjct: 51  LPKSGDS-DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELA 109

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ---IHGMCMKSGFEWNPVVGNSI 154
             LF +M      P    +S N+   G + +   G        M  +    W     N+I
Sbjct: 110 RMLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSW-----NTI 158

Query: 155 IDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
           +  Y++ G +++A R+FD MP K+ ++WNA+++ YV     ++  +LF   +        
Sbjct: 159 LSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWA----- 213

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK---TVIAGSLVDFYVKCGCLVEAR 271
                 L +   L  +GG  +    +    F  S+K    V   +++  Y + G + EAR
Sbjct: 214 ------LVSWNCL--LGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEAR 265

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           ++FD      V +W++++ GY Q   + EA ELF ++ ER    +    ++M+  +    
Sbjct: 266 QLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGE 321

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            VE  K++      V    + S  N+++  Y +CG I EA  LF++MP ++ V+W  +I 
Sbjct: 322 RVEMAKELF----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 377

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL------- 444
           GY + G + EA+ LF  M  +    +  ++ + LS C+    +E  ++   RL       
Sbjct: 378 GYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 437

Query: 445 --------------------CND--KRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESMP 481
                                ND  K M  + I  ++ ++    R G  +EA    ESM 
Sbjct: 438 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMK 497

Query: 482 ---VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSW 536
              +KP  A    +LSAC   G ++ GR+    + +  G  P   +Y  M ++   AG  
Sbjct: 498 REGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLL 557

Query: 537 NECERLRK 544
            E   L K
Sbjct: 558 EEAHNLMK 565



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 10/176 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR SFS          +L  C+  + L+ G QLHG LVK G+     + N L+ MY KC
Sbjct: 402 LNRSSFS---------SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 452

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  +F +M  +++VSW  ++ G+ ++G  +  L  F  M    +KP++ T+   +
Sbjct: 453 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVL 512

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            A      V+ G Q  H M    G   N      ++D+  + G + EA  +   MP
Sbjct: 513 SACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMP 568


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/603 (36%), Positives = 342/603 (56%), Gaps = 48/603 (7%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +++ G Q+H     SG      + N ++DMY+KCG + +A ++FD M  + L +WN MI+
Sbjct: 134 ALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMIS 192

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC----------------------- 224
           GYV  G  +K   LF KM       D F++T+ +  C                       
Sbjct: 193 GYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSK 248

Query: 225 -------------GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
                         ++ S+  G +IHG ++  G       V+  SL+D Y KCG + EAR
Sbjct: 249 SNKCTISSALAASAAIPSLHMGKKIHGHIMRMGL--DSDEVVWCSLLDMYGKCGSIEEAR 306

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            +FD +E++ V+SW+++I  Y +     E   LFR L   ++  + F  + ++   AD A
Sbjct: 307 YIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLA 366

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             + GKQIHAY  +V     +S ++++V MY KCG I+ A  +F  +P  ++ +WT ++ 
Sbjct: 367 AEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLV 426

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY +HG   +A+  F  +L    +PDG+A++ VLSAC+H+GLV++  EYF  +     + 
Sbjct: 427 GYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLT 486

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             I+HY+CI+D L RAG+  EA+++I  MP+KP   IW  LL  CR+HG+LEL +   + 
Sbjct: 487 RTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKS 546

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L  ++ +NP  YV ++NI+A AG   E   +R+   S+G+ K  G SW+E+ +E+H F  
Sbjct: 547 LFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSV 606

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD++HP +++I + L E+ KRMK E+G+V    + LHD++ E KEE+L  HSEKLA+   
Sbjct: 607 GDNSHPKSKEILEYLSELSKRMK-EVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFG 665

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           ++    +   G  I+VFKNLR C DCH  IK +S I     +VRD+ RFH FEGG CSC 
Sbjct: 666 II----STPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCK 721

Query: 692 DYW 694
           DYW
Sbjct: 722 DYW 724



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 226/447 (50%), Gaps = 49/447 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C K   L  G Q+H A +K   S  L ++N L+DMYAKCG +  A  VFD+M+ R++
Sbjct: 126 LKFCLKQRALKEGKQVH-AHIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDL 184

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS------------------------------ 108
            SW  ++ G+++ GN +   +LF +M +                                
Sbjct: 185 CSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKH 244

Query: 109 --VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
              K N+ T+S+ + AS  + S+  G +IHG  M+ G + + VV  S++DMY KCG I E
Sbjct: 245 DYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEE 304

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD M  + +++W  MI  Y+  G  ++G  LFR +     +P++FTF   L AC  
Sbjct: 305 ARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACAD 364

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           L +   G QIH +++  GF     +  A +LV  Y KCG +  A+ VF+++ Q  + SW+
Sbjct: 365 LAAEDLGKQIHAYMVRVGF--DSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWT 422

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           SL++GYAQ     +A+  F  L +   + DG     ++   A   LV++G + + ++ K 
Sbjct: 423 SLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE-YFHSIKE 481

Query: 347 PSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG---LAK 400
             GL  ++ +   I+D+  + G   EA  + NEMP+K +   W  ++ G   HG   LAK
Sbjct: 482 KHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAK 541

Query: 401 EAV-GLFRKMLLDDVEPDGVAYLAVLS 426
            A   LF      ++EP+  A    L+
Sbjct: 542 RAAKSLF------EIEPENPATYVTLA 562



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 52/350 (14%)

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E P    + + LK C    ++  G Q+H  + TSG   S+   I+  L+D Y KCG LV+
Sbjct: 115 EKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG---SIGLYISNRLLDMYAKCGSLVD 171

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG---- 325
           A +VFD +  + + SW+ +I GY +  N  +A  LF ++  R    D F  ++++     
Sbjct: 172 AEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQ 227

Query: 326 ------VFADFALVEQ--------------------------GKQIHAYAAKVPSGLDTS 353
                     + L+++                          GK+IH +  ++    D  
Sbjct: 228 HNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEV 287

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V  S++DMY KCG I+EA  +F++M  ++VV+WT +I  Y K+G  +E   LFR ++  +
Sbjct: 288 VWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSN 347

Query: 414 VEPDGVAYLAVLSACSH---SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
           + P+   +  VL+AC+      L ++   Y  R+  D          S +V    + G +
Sbjct: 348 IMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAA----SALVHMYSKCGDI 403

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           + AK++ E +P +P +  W +LL     HG  +      E+LL+  G  P
Sbjct: 404 ENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKALHFFELLLK-SGTKP 451



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+     D G Q+H  +V++GF       + L+ MY+KCG++  A +VF+ + 
Sbjct: 355 FAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP 414

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + ++ SWT+L+ G+ Q+G     L  F  +  S  KP+       + A      V+ G++
Sbjct: 415 QPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE 474

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLA 192
             H +  K G          IID+ ++ G+  EA  + + MP K     W A++ G  + 
Sbjct: 475 YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIH 534

Query: 193 G 193
           G
Sbjct: 535 G 535


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 382/681 (56%), Gaps = 8/681 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C     L +G  +H  ++K G++ ++  +N LI MY+  G    A  VF  M+
Sbjct: 235 LSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMV 294

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E++++SW ++M  + Q+GN    L L   M       N  T ++ + A         G  
Sbjct: 295 EKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKI 354

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + +  G   N +VGN+++ +Y+K G + EA ++F  MP +  +TWNA+I G+  +  
Sbjct: 355 LHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEE 414

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVI 253
            D+ L  F+ M+E G   +  T ++ L AC +   +   G  IH F+I +GF       +
Sbjct: 415 PDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGF--QSDEYV 472

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SL+  Y KCG L  +  +FD +  K+  +W++++   A   ++ EA++   ++R   +
Sbjct: 473 QNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGV 532

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            VD F  S  +   A  A++E+G+Q+H  A K+    +  V+++ +DMY KCG ID+   
Sbjct: 533 NVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLR 592

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +      ++ ++W ++ + + +HG  ++A   F +M+   V+PD V ++++LSACSH G+
Sbjct: 593 IIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGM 652

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           VEE   Y+  +  +  +  +I H  CI+D LGR+GR  EA+  I+ MPV P+  +W++LL
Sbjct: 653 VEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLL 712

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           +AC+ HG+LELGR+  E LL+LD  +   YV+ SNI A  G W + E++R+      +KK
Sbjct: 713 AACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKK 772

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
               SWV++  ++  F  GD +HP   +I+  L E+ K+M +E G++  + YAL D  EE
Sbjct: 773 KPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEEL-KKMIKEAGYIPDISYALQDTDEE 831

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KE +L  HSE+LA+   L+    +   G  +++FKNLRVCGDCH   K  S IL    V
Sbjct: 832 QKEHNLWNHSERLALAYGLI----SSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIV 887

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           +RD  RFH+F GG CSC DYW
Sbjct: 888 LRDPYRFHQFSGGQCSCTDYW 908



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 206/409 (50%), Gaps = 4/409 (0%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     +L  GVQ+HG +VK+G   D+ +   L+ +Y   G    A  VF +M+ +NVVS
Sbjct: 39  CERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVS 98

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WTALM  ++  G     ++++ +M S  +  N+ T+S+ I     L +   G Q+ G  +
Sbjct: 99  WTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVI 158

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G E N  V NS+I M+   G + EA  +F  M     I+WN+MIA Y+  G   + L 
Sbjct: 159 KYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLR 218

Query: 201 LFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            F  M + H EI +  T ++ L  CGS+ ++  G  IH  ++   F ++     + +L+ 
Sbjct: 219 CFSWMFRVHKEI-NSTTLSTMLAGCGSVDNLKWGRGIHSLVLK--FGWNSNVCASNTLIT 275

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y   G   +A  VF  + +K +ISW+S++  YAQ+ N  +A++L   +       +   
Sbjct: 276 MYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVT 335

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +S +   +D     +GK +HA    V    +  V N++V +Y K GL+ EA ++F  MP
Sbjct: 336 FTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP 395

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            ++ VTW  +I G+       EA+  F+ M  + V  + +    VL AC
Sbjct: 396 KRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGAC 444



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 214/448 (47%), Gaps = 11/448 (2%)

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS-SVENGMQIHGMCMKSG 143
           M GF++ G+ +  +  F +M    VKP+   +++ + A       +  G+Q+HG  +K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
              +  VG S++ +Y   G   +A ++F  M  K++++W A++  YV  G     + ++R
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M+  G   ++ T +S +  C SL +   G Q+ G +I  G   +V   +A SL+  +  
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVS--VANSLISMFGY 178

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            G + EA  VF  +++   ISW+S+I  Y +     E++  F  +     +++   LS+M
Sbjct: 179 FGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTM 238

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +        ++ G+ IH+   K     +   SN+++ MY   G  ++A  +F  M  K++
Sbjct: 239 LAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDM 298

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           ++W  ++  Y + G   +A+ L   M       + V + + L+ACS      E +     
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGK-ILHA 357

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           L     +   +   + +V    ++G + EAK + ++MP +  +  W  L+     H D E
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVT-WNALIGG---HADSE 413

Query: 504 LGREVGEI--LLRLDGDNPVNYVMMSNI 529
              E  +   L+R +G  P+NY+ +SN+
Sbjct: 414 EPDEALKAFKLMREEG-VPINYITISNV 440


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 372/703 (52%), Gaps = 43/703 (6%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G ++H  +   G      L N L+ MYA+ G +  A  +F  +  R+  SW A++  
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             Q+G+    L +F +M    +KPN  T    I        +  G +IH   + +GF+ +
Sbjct: 183 HSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSD 241

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            VV  ++I+MY KCG  +EA  +FD M  + +++WN MI  YV  G   + L L++K+  
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDM 301

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G    + TF S L AC S+ ++  G  +H  ++  G    V   +A +LV+ Y KCG L
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV--AVATALVNMYAKCGSL 359

Query: 268 VEARRVFDLIEQKSVISWSSLILGYA---------------------------------- 293
            EAR+VF+ ++ +  ++WS+LI  YA                                  
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYV 419

Query: 294 QEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           Q      AM++FR++   + L+ D     +++   A    + + K +HA  ++     + 
Sbjct: 420 QNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNV 479

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V+N++++MY +CG ++EA  LF     K VV+WT ++  + ++G   EA+ LF++M L+
Sbjct: 480 VVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLE 539

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            V+PD V Y ++L  C+H G +E+   YF+ +     + P  +H++ +VD LGR+GRL +
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFD 599

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
           AK L+ESMP +P    W T L+ACR+HG LELG    E +  LD  +   Y+ MSNI+A 
Sbjct: 600 AKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAA 659

Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
            G W +   +RK    +GLKK+ G S++EVD ++H F  G   HP T++I + L  +   
Sbjct: 660 HGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGL 719

Query: 593 MKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
           M+   G+V   K  LHD+ E  KE  L  HSEK+AI   LV    +   G+ IRV KNLR
Sbjct: 720 MRAA-GYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS---SRGSGEPIRVVKNLR 775

Query: 653 VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG-GVCSCGDYW 694
           VC DCH   K +++I     ++RD  RFHRF   G CSCGDYW
Sbjct: 776 VCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 243/451 (53%), Gaps = 15/451 (3%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           +P+  T  T + +      V  G  +H     S FE + +VGN++I MY KC  + +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 170 MFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           +F+ M    +++++WNAMIA Y   G+S + L+L+ +M   G   D  TF S L AC SL
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                G +IH  +  SG   S ++ +A +LV  Y + G + +A+R+F  ++ +   SW++
Sbjct: 124 AQ---GREIHNRVFYSGLD-SFQS-LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +IL ++Q  + + A+ +F++++   ++ +     +++  F+   ++ +G++IHA    V 
Sbjct: 179 VILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEI--VA 235

Query: 348 SGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +G D+   V+ ++++MY KCG   EA E+F++M  +++V+W V+I  Y ++G   EA+ L
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           ++K+ ++  +     ++++L ACS    + + +   S +  ++ +   +   + +V+   
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHIL-ERGLDSEVAVATALVNMYA 354

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           + G L+EA+ +  +M  + ++A W TL+ A   +G  +  R+  ++  RL   + + +  
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVA-WSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNA 413

Query: 526 MSNIHADAGSWNECERL-RKLARSKGLKKVA 555
           M   +   G      ++ R++  + GLK  A
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/685 (33%), Positives = 387/685 (56%), Gaps = 20/685 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K   L+ G +LH  L+  GF  D+ L   L+ MYAKCG ++ A  VF+ M  +++ +W
Sbjct: 40  CTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAW 99

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ++++  + + G  +  + L+ +M +  V+PN  T +  +     ++ + +G  IH   + 
Sbjct: 100 SSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILA 159

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S    + V+ +S+++MY KC  + EA ++F+ M A+++ ++ AMI+ YV AG   + L L
Sbjct: 160 SKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALEL 219

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F +M +   I P+ +TF + L A   LG++  G ++H  L + GF  +V  V+  +LV  
Sbjct: 220 FSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV--VVQNALVTM 277

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG  VEAR+VFD +  ++VISW+S+I  YAQ  N  EA+ LF+++    ++  G   
Sbjct: 278 YGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSF 334

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           SS +   A    +++G++IH    +        +  S++ MY +CG +D+A  +FN M  
Sbjct: 335 SSALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKT 393

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           ++  +   +I  + +HG  K+A+ ++RKM  + +  DG+ +++VL ACSH+ LV + +++
Sbjct: 394 RDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDF 453

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              L  D  + P +EHY C+VD LGR+GRL +A+ L+E+MP +     W TLLS C+ HG
Sbjct: 454 LQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           DL+ G      +  L     + YV +SN++A A  +++  R+RK    +G+ +    S++
Sbjct: 514 DLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYI 573

Query: 561 EVDKEIHFFY-GGDDTHP------LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ-- 611
           E+D E+H F  GG D           E++  +L+E+ + MK+  G+V   +    + Q  
Sbjct: 574 EIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQA-GYVPDTREVYLEQQGV 632

Query: 612 --EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
             EE K+ SL  HSE+LAI   L+    +    + +RV  + RVC  CH  IK LS I +
Sbjct: 633 TSEEEKQRSLCFHSERLAIAYGLI-AAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITE 691

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
               VRD +RFH FE G CSCGD+W
Sbjct: 692 KRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 238/420 (56%), Gaps = 13/420 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           ++   ++ G     L L+ +M    +  ++F +++ + A   L ++E G ++H   + +G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F  +  +  +++ MY+KCG +++A R+F+ M  K L  W+++IA Y  AG  +  ++L+R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M   G  P+  TF   L  C S+  +  G  IH  ++ S  P     V+  SL++ Y+K
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQD--DVLQDSLLNMYLK 178

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSS 322
           C  +VEAR+VF+ ++ ++V S++++I  Y Q    AEA+ELF R  +  +++ + +  ++
Sbjct: 179 CDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFAT 238

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++G       +E+G+++H + A    G DT+  V N++V MY KCG   EA ++F+ M  
Sbjct: 239 ILGAVEGLGNLEKGRKVHRHLAS--RGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA 296

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           +NV++WT +I  Y +HG  +EA+ LF++M   DVEP GV++ + L+AC+  G ++E +E 
Sbjct: 297 RNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREI 353

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R+       P++E  + ++    R G LD+A+ +   M  + + +    +++A   HG
Sbjct: 354 HHRVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHG 410


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/570 (38%), Positives = 341/570 (59%), Gaps = 11/570 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G ++H   +K+ +  +  +   +I +Y+KC  + +A  MFD MP K++++W AMI+
Sbjct: 105 AIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMIS 164

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSGFP 246
            Y   G++ + L LF +M      P+ FTF + L +C GSLG    G QIH   I     
Sbjct: 165 AYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHSIAIKRN-- 221

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           Y     +  SL+D Y K G + +A  VF  + ++ V++ +++I GYAQ     EA++LFR
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           QL+   +  +    +S++   +  A +  GKQ+H++  +        + NS++DMY KCG
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVL 425
            +  A  +F+ MP +  ++W  ++ GY KHG+A+E + LF+ M  ++ V+PD + YLAVL
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401

Query: 426 SACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           S CSH  L +   E F  + N K  ++P I HY C+VD LGRAGR++EA + I+ MP  P
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           + AIW +LL +CRVH D+E+G  VG+ LL L+ +N  NYV++SN++A AG W +   +R 
Sbjct: 462 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRD 521

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           L + K + K  GRSWVE+D+ +H F+  D THP  E++ + + E+  + KE+ G+V  + 
Sbjct: 522 LMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKED-GYVPDLS 580

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             L+D+ EE KE+ L  HSEKLA+   L+        G  IRV KNLR+C DCH F K +
Sbjct: 581 CVLYDVDEEQKEKVLLGHSEKLALAFGLI----ATPEGTTIRVIKNLRICVDCHSFAKFV 636

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S++     ++RD  RFH   GGVCSCGDYW
Sbjct: 637 SRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 220/409 (53%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     +  G ++H  ++K  +   + L   LI +Y KC  +  A  +FD+M ++NVVSW
Sbjct: 100 CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSW 159

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++  + Q G A   L+LF +M  S  +PN FT +T + +       E G QIH + +K
Sbjct: 160 TAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIK 219

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
             +E +  VG+S++DMY+K GRI +A  +F  +P + ++   A+I+GY   G  ++ L L
Sbjct: 220 RNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKL 279

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           FR++Q  G   +  T+ S L A   L ++  G Q+H  ++ SG  YS   V+  SL+D Y
Sbjct: 280 FRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSG-QYSY-VVLLNSLIDMY 337

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVL 320
            KCG +  ARR+FD + +++ ISW+++++GY++     E +ELF+ +RE + ++ D    
Sbjct: 338 SKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITY 397

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   L + G +I         G++  + +   +VD+  + G ++EA +   +M
Sbjct: 398 LAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 457

Query: 379 P-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P V     W  ++     H   +  + + +K+L  ++EP+      +LS
Sbjct: 458 PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL--ELEPENAGNYVILS 504



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 8/280 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C  +L  + G Q+H   +K  +   + + + L+DMYAK G +  A  VF  + 
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VV+ TA++ G+ Q G  +  L LF Q+    +  N  T ++ + A   L+++ +G Q
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++SG     V+ NS+IDMYSKCG +  A R+FD MP ++ I+WNAM+ GY   G 
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + + L LF+ M+E  ++ PD  T+ + L  C        G +I   ++            
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLI 289
            G +VD   + G + EA   FD I++   +     W SL+
Sbjct: 434 YGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLL 470


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/627 (38%), Positives = 356/627 (56%), Gaps = 20/627 (3%)

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           L+    SW A +    +  + +  L+L+CQM +S   PN FT     K+   LS    G 
Sbjct: 17  LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGS 76

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV-MPAKSL-ITWNAMIAGYVL 191
           Q+HG  +K+G E  P V  S+I MY KC  I  A ++FD    +++L + +NA+IAGY L
Sbjct: 77  QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                  +LLFR+M++ G   +  T    +  C     +G GT +H   +  G    +  
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLS- 195

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +   L+  YV+CG +  AR++FD + +K +I+W+++I GYAQ       ++L+R++   
Sbjct: 196 -VGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFT 254

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  D   L  ++   A       G+++         G +  + N++++MY +CG + +A
Sbjct: 255 GIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKA 314

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ M  KNV++WT II GYG HG  + AV LF +M+  D  PDG A+++VLSACSH+
Sbjct: 315 RAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GL E+   YF+ +  D  ++P  EHYSC+VD LGRAGRL+EA+ LI SM V+P  A+W  
Sbjct: 375 GLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGA 434

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL AC++H ++EL     E ++  +  N   YV++SNI ++AG+     R+R + R + L
Sbjct: 435 LLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKL 494

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G S+VE    IH F  GD THP  ++I+ +L  +E  +K   G         +D  
Sbjct: 495 KKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGS--------NDND 546

Query: 612 EESKEESL----RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           +ES+ E L     VHSEKLAI   L+    N +PG  I V KNLRVCGDCH F+K +S+I
Sbjct: 547 QESRNEELITGMGVHSEKLAIAFGLI----NTEPGTEITVIKNLRVCGDCHLFLKLVSEI 602

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +    VVRDATRFH F+ GVCSC DYW
Sbjct: 603 VDRQLVVRDATRFHHFKNGVCSCKDYW 629



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 206/414 (49%), Gaps = 10/414 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK-MLER 76
           + + C+   L   G QLHG ++K G   +  +   LI MY KC  +  A  VFD+    R
Sbjct: 62  AFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSR 121

Query: 77  NV-VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           N+ V + AL+ G+  N      + LF QM    V  N  T+   I        +  G  +
Sbjct: 122 NLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSL 181

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   ++ G + +  VGN ++ MY +CG ++ A ++FD MP K LITWNAMI+GY   G +
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLA 241

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              L L+RKM+  G +PD  T    L +C  LG+   G ++   +  SGF ++    +  
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFN--PFLKN 299

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L++ Y +CG LV+AR +FD + +K+VISW+++I GY        A++LF ++       
Sbjct: 300 ALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELP 359

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           DG    S++   +   L E+G   +  A +   GL     +   +VD+  + G ++EA +
Sbjct: 360 DGAAFVSVLSACSHAGLTEKG-LYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L   M V+ +   W  ++     H   + A   F K++  + EP  + Y  +LS
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVI--EFEPTNIGYYVLLS 470


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/669 (35%), Positives = 381/669 (56%), Gaps = 8/669 (1%)

Query: 26  LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM 85
           +LL +  Q++  L+  G      L    I+     G++N A   F ++ E +++ W A++
Sbjct: 13  MLLKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAII 72

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            G+ Q     A + ++  M  S V PN FT    +KA G  S    G QIHG   K GF 
Sbjct: 73  KGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG 132

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            N  V NS++ MY+K G+I+ A  +FD +  +++++W ++I+GYV  G   + L +F++M
Sbjct: 133 SNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 192

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           ++    PD     S + A  ++  +G G  IHG +   G  +    VI  SL   Y K G
Sbjct: 193 RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRG 250

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +  AR  F+ +E+ ++I W+++I GYA      EA++LFR++  ++++VD   + S + 
Sbjct: 251 LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVL 310

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A    +E  + +  Y +K     DT V+  ++DMY KCG I  A  +F+ +  K+VV 
Sbjct: 311 ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 370

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+V+I GYG HG  +EA+ L+ +M    V P+   ++ +L+AC +SGLV+E  E F  L 
Sbjct: 371 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLM 429

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  ++P  +HYSC+VD LGRAG L++A + I SMP+KP +++W  LLSAC++H  + LG
Sbjct: 430 PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 489

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               E L  LD  N  +YV +SN++A A  W     +R +   KGL K  G S +E++  
Sbjct: 490 EIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGN 549

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +  F  GD +HP +++I + L  +EKR+K   G+V  ++  LHD+  E  EE+L  HSE+
Sbjct: 550 LETFQVGDRSHPKSKEIFEELDRLEKRLKAA-GYVPHMESVLHDLNHEEIEETLCHHSER 608

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   ++    +  PG  +R+ KNLR C +CH  IK +SK++    ++RDA RFH F+ 
Sbjct: 609 LAVAYGII----STAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKD 664

Query: 686 GVCSCGDYW 694
           GVCSCGD+W
Sbjct: 665 GVCSCGDFW 673



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 3/379 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    +   G Q+HG   K GF  ++ + N L+ MYAK G+++ A  VFDK+ +R V
Sbjct: 107 LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 166

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G++QNG+    L++F +M   +VKP+   L + + A   +  +  G  IHG+
Sbjct: 167 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 226

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K G E+ P +  S+  MY+K G +  A   F+ M   +LI WNAMI+GY   GY ++ 
Sbjct: 227 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 286

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR+M       D  T  S + A   +GS+     + G++  S   Y   T +   L+
Sbjct: 287 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS--EYRDDTFVNTGLI 344

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  AR VFD +  K V+ WS +I+GY    +  EA+ L+ ++++  +  +  
Sbjct: 345 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 404

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++    +  LV++G ++                + +VD+  + G +++A +    M
Sbjct: 405 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 464

Query: 379 PVK-NVVTWTVIITGYGKH 396
           P+K  V  W  +++    H
Sbjct: 465 PIKPGVSVWGALLSACKIH 483


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/685 (33%), Positives = 378/685 (55%), Gaps = 26/685 (3%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           YG  +HG ++K G      L N L+  Y KCG +  A  +F+++  ++VVSW A++    
Sbjct: 243 YGAMVHGRIIKAGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANE 301

Query: 90  QNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           Q G  +  L LF +M      V+PN  T  + + A   LS++  G +IH    +   E +
Sbjct: 302 QRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVD 361

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             + NS+I  YSKC  + +A  +F+ +  + +I+WN+M+AGY       +   +F++M  
Sbjct: 362 TSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMML 421

Query: 208 HGEIPDEFTFTSTLKACGSLGSVG-----GGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
            G  PD  + T    A  S  S G      G +IHG+++    P  V   ++ +++  Y 
Sbjct: 422 SGIEPDSHSLTIIFNA-ASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYA 480

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           K   + +A ++F  ++ +   SW++++ GY++     + + +F  + ++   +D   LS 
Sbjct: 481 KFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSI 540

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDT-------SVSNSIVDMYLKCGLIDEATELF 375
           ++        ++ GKQ HA  AK+ +G D        S++N+++ MY KCG I +A ++F
Sbjct: 541 LLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVF 600

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            +M  K+V +WT +ITG   HGLA EA+ LF +M  D ++P+ V +LA+L AC+H GLV+
Sbjct: 601 LKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQ 660

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES--MPVKPS----IAIW 489
           E   YF  + ND  + P IEHY+C++D  GR+G+ D AK+L+E      KP     + +W
Sbjct: 661 EGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLW 720

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           + LL AC     L+LG E    +L L+ ++   Y++++N++A +G W +  ++RK  R K
Sbjct: 721 KVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDK 780

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           GL+K  G SW++     H F  GD  HP  ++I++ L ++    +  +G+V   +  LHD
Sbjct: 781 GLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCR-RMGYVPMTELVLHD 839

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           + E  KE  L  HSEKLA+   L+  G+      VIRV KNLRVC DCH ++K  S + K
Sbjct: 840 VDETEKEAILGCHSEKLAVSFGLLNCGVGN---GVIRVMKNLRVCEDCHSWMKFASLLEK 896

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              ++RD+ RFH F  G CSCGDYW
Sbjct: 897 REILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 256/508 (50%), Gaps = 34/508 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD    R+V+SW+AL+  + + GN      LF +M    ++PN F+L++ +K S  
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWN 183
              +    Q+HG  +++GF  +  +  + I MYS+CG + +A R+FD   + A  ++ WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           ++IA Y+  G   + L LF KM   G + P E T+ S + ACGS G    G  +HG +I 
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +G      T +  SLV FY KCG L  A ++F+ I +K V+SW+++I    Q      A+
Sbjct: 254 AGLE---ATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENAL 310

Query: 303 ELFRQLR--ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
            LFR++   E  +Q +     S++   +  + +  G++IHA+  ++   +DTS++NS++ 
Sbjct: 311 GLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLIT 370

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
            Y KC  + +A E+F  + ++++++W  ++ GY ++        +F++M+L  +EPD  +
Sbjct: 371 FYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHS 430

Query: 421 YLAVLSACSH--SGLV-----EESQEYFSRLCNDKRMKP---RIEHYSCIVDSLGRAGRL 470
              + +A S   SGL+     +E   Y  R     R+ P    +   + I+    +  R+
Sbjct: 431 LTIIFNAASRDSSGLIYFRRGKEIHGYILR-----RITPGGVSLSVSNAILKMYAKFNRI 485

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR-LDGDNPVNYVMMSNI 529
            +A+ + + M  + S + W  ++     +   E   +V  I L  L    P+++V +S +
Sbjct: 486 ADAEKIFKGMKNRDSYS-WNAMMDGYSRNAKFE---DVLMIFLDILKQGFPLDHVSLSIL 541

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGR 557
                    C RL  L   K    V  +
Sbjct: 542 ------LTSCGRLVSLQLGKQFHAVVAK 563



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 254/520 (48%), Gaps = 26/520 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK--MLERNVVSWTALMCGFLQ 90
           QLHG  ++ GF  D  +    I MY++CG +  A  VFD+  +L  +++ W +++  ++ 
Sbjct: 142 QLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIF 201

Query: 91  NGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +G     L LFC+M S   V P E T ++ + A G     + G  +HG  +K+G E    
Sbjct: 202 HGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN- 260

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ--E 207
           + NS++  Y KCG +  A+++F+ +  K +++WNAMIA     G  +  L LFR+M   E
Sbjct: 261 LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVE 320

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
               P+  TF S L A   L ++  G +IH  +        V T I  SL+ FY KC  +
Sbjct: 321 PPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFR--LSLEVDTSITNSLITFYSKCREV 378

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +AR +F+ +  + +ISW+S++ GY Q E      ++F+++    ++ D   L+ +    
Sbjct: 379 GKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAA 438

Query: 328 AD----FALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           +          +GK+IH Y  +   P G+  SVSN+I+ MY K   I +A ++F  M  +
Sbjct: 439 SRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNR 498

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY- 440
           +  +W  ++ GY ++   ++ + +F  +L      D V+   +L++C     ++  +++ 
Sbjct: 499 DSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFH 558

Query: 441 --FSRLCNDK---RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
              ++L N +        +   + ++    + G + +A  +   M  K   + W  +++ 
Sbjct: 559 AVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFS-WTAMITG 617

Query: 496 CRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADA 533
           C  HG   L  E  ++  R+  DG  P     ++ + A A
Sbjct: 618 CAHHG---LAVEALQLFERMKTDGIKPNQVTFLALLMACA 654



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 173/342 (50%), Gaps = 20/342 (5%)

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           R+  A ++FD  P + +I+W+A+IA Y   G   +   LF+KM   G  P+ F+  S LK
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE--QK 280
              S G +G   Q+HG+ I +GF   + + I  + +  Y +CG L +A+RVFD       
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGF--GLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLAL 187

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG-FVLSSMMGVFADFALVEQGKQI 339
            ++ W+S+I  Y       E + LF ++    +        +S++         + G  +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247

Query: 340 HAYAAKVPSGLD-TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           H    K  +GL+ T++ NS+V  Y KCG +  A++LF  +  K+VV+W  +I    + G 
Sbjct: 248 HGRIIK--AGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGE 305

Query: 399 AKEAVGLFRKMLL--DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
            + A+GLFR+ML     V+P+ V +L++LSA S    +   +E  + +      +  +E 
Sbjct: 306 GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHI-----FRLSLEV 360

Query: 457 YSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + I +SL     +   + +A+ + E + ++  I+ W ++L+
Sbjct: 361 DTSITNSLITFYSKCREVGKAREIFERLLLRDIIS-WNSMLA 401


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/695 (33%), Positives = 369/695 (53%), Gaps = 40/695 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAK--CGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H   +  G   + ++   +I    K   G+M  A  VFD M   N   W  ++ G+ +
Sbjct: 37  QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSR 96

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G   + +S++C+M    V P+E+T    +K     ++V+ G ++H   +K GF  N  V
Sbjct: 97  VGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFV 156

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I +YS  G ++ A  +FD      ++TWN MI+GY  +   D+ + LF +M+    
Sbjct: 157 QNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRV 216

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE- 269
           +P   T  S L AC  L  +  G ++H ++           V+  +L+D Y  CG +   
Sbjct: 217 LPSSITLVSVLSACSKLKDLNVGKRVHRYV--KDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 270 ------------------------------ARRVFDLIEQKSVISWSSLILGYAQEENLA 299
                                         AR  FD + ++  +SW+++I GY Q     
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           E + LFR+++  +++ D F + S++   A    +E G+ I AY  K    +D+ V N+++
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY  CG +++A  +FN MP ++ ++WT +I G   +G  +EA+ +F +ML   + PD V
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
             + VL AC+HSG+V++ +++F+R+     ++P + HY C+VD LGRAG L EA  +I++
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MPVKP+  +W +LL ACRVH D E+     + +L L+ +N   YV++ NI+A    W + 
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
             +RKL   +G+KK  G S +E++  +H F  GD  HP +++I+  L EM   +K   G+
Sbjct: 575 HEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFA-GY 633

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
                    DI EE KE ++  HSEKLAI   L+  G    PG  IR+ KNLR+C DCH 
Sbjct: 634 SPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSG----PGVTIRIVKNLRMCVDCHY 689

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SK+     +VRD TRFH F  G CSC DYW
Sbjct: 690 VAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 39/437 (8%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +++  +  G +LH  +VK+GFS ++ + N LI +Y+  GE++ A  VFD+  + +VV+W 
Sbjct: 130 TRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWN 189

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
            ++ G+ ++      + LF +M    V P+  TL + + A   L  +  G ++H      
Sbjct: 190 VMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDL 249

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEA------------------------------AR-MF 171
             E   V+ N++IDMY+ CG ++ A                              AR  F
Sbjct: 250 KIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYF 309

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D MP +  ++W AMI GY+      + L LFR+MQ     PDEFT  S L AC  LG++ 
Sbjct: 310 DKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALE 369

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  I  ++  +     + + +  +L+D Y  CG + +A R+F+ +  +  ISW+++I G
Sbjct: 370 LGEWIKAYIDKNEI--KIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
            A      EA+++F Q+ + S+  D      ++       +V++GK+  A       G++
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMT-TQHGIE 486

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRK 408
            +V++   +VD+  + G + EA E+   MPVK N + W  ++     H   + A    ++
Sbjct: 487 PNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQ 546

Query: 409 MLLDDVEPDGVAYLAVL 425
           +L  ++EP+  A   +L
Sbjct: 547 IL--ELEPENGAVYVLL 561



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 37/309 (11%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV----- 69
           L   L  CSK   L+ G ++H  +  +      +L N LIDMYA CG+M+ A  +     
Sbjct: 223 LVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK 282

Query: 70  --------------------------FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                     FDKM ER+ VSWTA++ G+LQ    K  LSLF +
Sbjct: 283 SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFRE 342

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M ++++KP+EFT+ + + A   L ++E G  I     K+  + +  VGN++IDMY  CG 
Sbjct: 343 MQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGN 402

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A R+F+ MP +  I+W A+I G  + GY ++ L +F +M +    PDE T    L A
Sbjct: 403 VEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCA 462

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVF-DLIEQK 280
           C   G V  G +    + T    + ++  +A  G +VD   + G L EA  V  ++  + 
Sbjct: 463 CTHSGMVDKGKKFFARMTTQ---HGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKP 519

Query: 281 SVISWSSLI 289
           + I W SL+
Sbjct: 520 NSIVWGSLL 528



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+ G  +   + K     D  + N LIDMY  CG +  A  +F+ M  R+ 
Sbjct: 359 LTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDK 418

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG- 137
           +SWTA++ G   NG  +  L +F QM  +S+ P+E T    + A      V+ G +    
Sbjct: 419 ISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFAR 478

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           M  + G E N      ++D+  + G + EA  +   MP K + I W +++  
Sbjct: 479 MTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGA 530


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/724 (33%), Positives = 394/724 (54%), Gaps = 50/724 (6%)

Query: 10  SERQRLADSL--RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNG 65
           +ER R   SL  RC S   L     Q H  +++ G   D    + L  + A      +  
Sbjct: 28  NERSRHTISLIDRCSSLRQL----KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEY 83

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK--PNEFTLSTNIKAS 123
           A  VFD++ + N  +W  L+  +    +    +  F  M SS  +  PN++T    IKA+
Sbjct: 84  ARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAA 143

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             +SS+  G  +HGM +KS    +  V NS+I  Y  CG ++ A ++F  +  K +++WN
Sbjct: 144 AEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN 203

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +MI G+V  G  DK L LF+KM+         T    L AC  +  +  G ++  ++  +
Sbjct: 204 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEEN 263

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA---- 299
               +V   +A +++D Y KCG + +A+R+FD +E+K  ++W++++ GYA  E+      
Sbjct: 264 RV--NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 321

Query: 300 ---------------------------EAMELFRQLR-ERSLQVDGFVLSSMMGVFADFA 331
                                      EA+ +F +L+ +++++++   L S +   A   
Sbjct: 322 VLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVG 381

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +E G+ IH+Y  K    ++  V+++++ MY KCG +++A E+FN +  ++V  W+ +I 
Sbjct: 382 ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIG 441

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           G   HG   EAV +F KM   +V+P+GV +  V  ACSH+GLV+E++  F ++ +   + 
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  +HY+CIVD LGR+G L++A   IE+MP+ PS ++W  LL AC++H +L L       
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTR 561

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           LL L+  N   +V++SNI+A +G W+    LRK  R  GLKK  G S +E+D  IH F  
Sbjct: 562 LLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 621

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEKLAIGL 630
           GD+ HP++EK++  L E+ +++K   G+   + + L  I+EE  KE+SL +HSEKLAI  
Sbjct: 622 GDNAHPMSEKVYGKLHEVMEKLKSN-GYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICY 680

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+     E P K IRV KNLR+CGDCH   K +S++     +VRD  RFH F  G CSC
Sbjct: 681 GLIS---TEAP-KAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSC 736

Query: 691 GDYW 694
            D+W
Sbjct: 737 NDFW 740


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/693 (35%), Positives = 377/693 (54%), Gaps = 43/693 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + LI+        +G   A +VFD + E N++ W  +  G   
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +KA     +   G QIHG  +K G + +  V
Sbjct: 81  SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I MY K GR                               I  A +MFD +P K +
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNA+I+GY   G   + L LF++M +    PDE T  + L AC    S+  G Q+H +
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y+KCG +  A  +F+ +  K VISW++LI GY       
Sbjct: 261 IDDHGFGSNLK--IVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNS 357
           EA+ LF+++       +   + S++   A    ++ G+ IH Y  K   G+   +S+  S
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++F+ M  +++ +W  +I G+  HG A  A  +F +M  D +EPD
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPD 438

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D ++ P++EHY C++D LG +G   EA+ +I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            SM + P   IW +LL AC++HG++ELG    + L++++  N  +YV++SNI+A AG WN
Sbjct: 499 NSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWN 558

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  + R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  ++E  
Sbjct: 559 EVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEA- 617

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 673

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           HE  K +SKI K   + RD TRFH F  GVCSC
Sbjct: 674 HEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 140/274 (51%), Gaps = 4/274 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+++  ++ G Q+H  +   GF  +L + N LID+Y KCGE+  A  +F+ +  ++V
Sbjct: 242 LSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDV 301

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  L+ G+      K  L LF +M  S   PNE T+ + + A   L +++ G  IH  
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVY 361

Query: 139 CMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
             K   G      +  S+IDMY+KCG I  A ++FD M  +SL +WNAMI G+ + G ++
Sbjct: 362 IDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRAN 421

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
               +F +M++ G  PD+ TF   L AC   G +  G  I   + T  +  + K    G 
Sbjct: 422 PAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM-TEDYKITPKLEHYGC 480

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           ++D     G   EA  + + +E     + W SL+
Sbjct: 481 MIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLL 514


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/634 (36%), Positives = 368/634 (58%), Gaps = 8/634 (1%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G++N A   F ++ E +++ W A++ G+ Q     A + ++  M  S V PN FT    +
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA G  S    G QIHG   K GF  N  V NS++ MY+K G+I+ A  +FD +  ++++
Sbjct: 93  KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W ++I+GYV  G   + L +F++M++    PD     S + A  ++  +G G  IHG +
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
              G  +    VI  SL   Y K G +  AR  F+ +E+ ++I W+++I GYA      E
Sbjct: 213 TKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEE 270

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A++LFR++  ++++VD   + S +   A    +E  + +  Y +K     DT V+  ++D
Sbjct: 271 AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLID 330

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG I  A  +F+ +  K+VV W+V+I GYG HG  +EA+ L+ +M    V P+   
Sbjct: 331 MYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGT 390

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           ++ +L+AC +SGLV+E  E F  L  D  ++P  +HYSC+VD LGRAG L++A + I SM
Sbjct: 391 FIGLLTACKNSGLVKEGWELF-HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P+KP +++W  LLSAC++H  + LG    E L  LD  N  +YV +SN++A A  W    
Sbjct: 450 PIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVA 509

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            +R +   KGL K  G S +E++  +  F  GD +HP +++I + L  +EKR+K   G+V
Sbjct: 510 NVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAA-GYV 568

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
             ++  LHD+  E  EE+L  HSE+LA+   ++    +  PG  +R+ KNLR C +CH  
Sbjct: 569 PHMESVLHDLNHEEIEETLCHHSERLAVAYGII----STAPGTTLRITKNLRACINCHSA 624

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IK +SK++    ++RDA RFH F+ GVCSCGD+W
Sbjct: 625 IKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 195/379 (51%), Gaps = 3/379 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C    +   G Q+HG   K GF  ++ + N L+ MYAK G+++ A  VFDK+ +R V
Sbjct: 92  LKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTV 151

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G++QNG+    L++F +M   +VKP+   L + + A   +  +  G  IHG+
Sbjct: 152 VSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGL 211

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K G E+ P +  S+  MY+K G +  A   F+ M   +LI WNAMI+GY   GY ++ 
Sbjct: 212 VTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEA 271

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR+M       D  T  S + A   +GS+     + G++  S   Y   T +   L+
Sbjct: 272 IKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKS--EYRDDTFVNTGLI 329

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  AR VFD +  K V+ WS +I+GY    +  EA+ L+ ++++  +  +  
Sbjct: 330 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 389

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++    +  LV++G ++                + +VD+  + G +++A +    M
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSM 449

Query: 379 PVK-NVVTWTVIITGYGKH 396
           P+K  V  W  +++    H
Sbjct: 450 PIKPGVSVWGALLSACKIH 468


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/569 (37%), Positives = 343/569 (60%), Gaps = 3/569 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    + YG  +H  ++K GF+ D+++ +  + MYAKC     A  +FD+M ER+V
Sbjct: 305 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV 364

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++  + Q+G  +  L LF +M  S  KP+  TL+T I +   L  +E G +IH  
Sbjct: 365 ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHME 424

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SGF  +  V ++++DMY KCG +  A  +F+ +  K++++WN+MIAGY L G S   
Sbjct: 425 LVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 484

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR+M E G  P   T +S L AC    ++  G  IHG++I +     +   +  SL+
Sbjct: 485 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI--FVNSSLI 542

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A  VF  + + +V+SW+ +I GY +  +  EA+ +F  +R+  ++ D  
Sbjct: 543 DLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAI 602

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S++   +  A++E+GK+IH +  +    ++  V  +++DMY KCG +DEA  +FN++
Sbjct: 603 TFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL 662

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P ++ V+WT +I  YG HG A EA+ LF KM   D +PD V +LA+LSACSH+GLV+E  
Sbjct: 663 PERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGC 722

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACR 497
            YF+++  +   KP +EHYSC++D LGR GRL EA  +++  P ++  + +  TL SAC 
Sbjct: 723 YYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACH 782

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H  L+LG ++G +L+  D D+P  Y+++SN++A    W+E  ++R   +  GLKK  G 
Sbjct: 783 LHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGC 842

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SW+EV K IH F   D +HP  + I++ +
Sbjct: 843 SWIEVGKRIHPFVVEDKSHPQADMIYECM 871



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 254/472 (53%), Gaps = 6/472 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-NVVSWTALMCGFL 89
           G  +H  +V +G   ++ L   LI++Y  C     A  VF  +    ++  W  LM    
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 90  QNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           +N      L +F ++     +KP+ FT  + +KA   L  V  G  +H   +KSGF  + 
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           VV +S + MY+KC    +A ++FD MP + + +WN +I+ Y   G  +K L LF +M+  
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  PD  T T+ + +C  L  +  G +IH  L+ SGF  ++   ++ +LVD Y KCGCL 
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--ALDGFVSSALVDMYGKCGCLE 451

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            A+ VF+ I++K+V+SW+S+I GY+ + +    +ELFR++ E  ++     LSS++   +
Sbjct: 452 MAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACS 511

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               ++ GK IH Y  +     D  V++S++D+Y KCG I  A  +F  MP  NVV+W V
Sbjct: 512 RSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNV 571

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+GY K G   EA+ +F  M    V+PD + + +VL ACS   ++E+ +E  + +   K
Sbjct: 572 MISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESK 631

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
                +     ++D   + G +DEA ++   +P +  ++ W ++++A   HG
Sbjct: 632 LEINEVV-MGALLDMYAKCGAVDEALHIFNQLPERDFVS-WTSMIAAYGSHG 681



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 207/370 (55%), Gaps = 11/370 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C++ L L+ G ++H  LV+ GF+ D  +++ L+DMY KCG +  A  VF+++ 
Sbjct: 402 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 461

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSW +++ G+   G++K+C+ LF +M    ++P   TLS+ + A     +++ G  
Sbjct: 462 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 521

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  +++  E +  V +S+ID+Y KCG I  A  +F  MP  ++++WN MI+GYV  G 
Sbjct: 522 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGS 581

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L++F  M++ G  PD  TFTS L AC  L  +  G +IH F+I S     +  V+ 
Sbjct: 582 YLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL--EINEVVM 639

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G+L+D Y KCG + EA  +F+ + ++  +SW+S+I  Y       EA++LF ++++   +
Sbjct: 640 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 699

Query: 315 VDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            D     +++   +   LV++G     + I  Y  K P+    S    ++D+  + G + 
Sbjct: 700 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK-PAVEHYSC---LIDLLGRVGRLR 755

Query: 370 EATELFNEMP 379
           EA E+    P
Sbjct: 756 EAYEILQRTP 765


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/667 (34%), Positives = 374/667 (56%), Gaps = 11/667 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  +H  +V+    FD++  N+LI +Y KCG +  A  VFD M  RN VS   LM G
Sbjct: 32  LSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  +G  +  L+L   +  +    NE+ LS+ + A+  + S + G Q HG  +K+G   +
Sbjct: 91  YASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEH 147

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P V ++++ MY +C  ++EA ++FD + + ++  +N+MI G++  G  D    + R M  
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVR 207

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           +    D  ++ + L  C S   V  G+Q+H   +      +V   +  +LVD Y KC   
Sbjct: 208 NVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNV--YVGSALVDMYGKCDFP 265

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA RVF+++ +K+++SW++++  Y Q E   +A++LF  +    ++ + F  +  +   
Sbjct: 266 HEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC 325

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A  A ++ G  + A   K        V N++++MY K G +++A  +F  MP ++VV+W 
Sbjct: 326 AGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWN 385

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II GY  HG A+EA+  F  ML  +  P  V ++ VLSAC+  GLV+E   Y + +  +
Sbjct: 386 SIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKE 445

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             +KP  EHY+C+V  L R GRLDEA+  IES  +   +  W++LLS+C+V+ +  LG  
Sbjct: 446 VGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHR 505

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
           V E + +L   +   YV++SN++A A  W+   ++R+L R  G++K  G SW++V  E+H
Sbjct: 506 VAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVH 565

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D  HP  E+I + L E+  ++K  +G+V  +  ALHD+++E KEE L  HSEKLA
Sbjct: 566 VFTSEDKKHPYMEQITKKLQELIDKIK-VIGYVPNIAVALHDVEDEQKEEHLMYHSEKLA 624

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +   L+R       G+ IR+ KN+R+C DCH  IK +S       VVRD  RFH  E GV
Sbjct: 625 LAFGLIR----TPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGV 680

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 681 CSCDDYW 687


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/671 (35%), Positives = 371/671 (55%), Gaps = 13/671 (1%)

Query: 30  YGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS---WTALM 85
           Y  QLH AL+K G  +      + L++  A    +        ++  R  +S   +  LM
Sbjct: 31  YLPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLM 90

Query: 86  CGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
             FL  G+ +  L LF +M   +S+   ++ T +  +K+   + +++ G  +    +K G
Sbjct: 91  RAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRG 150

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
              +  V +S+I MY+ CG +  A  +FD      ++ WNA++A Y+  G   + + +F+
Sbjct: 151 LVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFK 210

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
            M E G   DE T  S + ACG +G    G  + G +   G   + K V A  L+D Y K
Sbjct: 211 GMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA--LMDMYAK 268

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG + +ARR+FD ++ + V++WS++I GY Q +   EA+ LF +++   ++ +   + S+
Sbjct: 269 CGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSV 328

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +   A    +E GK +H+Y  +    L T +  ++VD Y KCG ID+A E F  MPVKN 
Sbjct: 329 LSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNS 388

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
            TWT +I G   +G  +EA+ LF  M    +EP  V ++ VL ACSHS LVEE + +F  
Sbjct: 389 WTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 448

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +  D  +KPR+EHY C+VD LGRAG +DEA   I +MP++P+  IW+ LLS+C VH ++ 
Sbjct: 449 MARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVG 508

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           +G E  + ++ L+  +  +YV++SNI+A AG W +   +RK  + +G++K  G S +E+D
Sbjct: 509 IGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELD 568

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
             +  F+  D  HP   +I+Q + EM  R+K   G+V        +++E  KE S+  HS
Sbjct: 569 GVVFEFFAEDSDHPELREIYQKVEEMIGRIKVA-GYVPNTADVRLEVEEREKEVSVSHHS 627

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLAI   L++      PG  IR+ KNLRVC DCH   K +SK+     VVRD   FH F
Sbjct: 628 EKLAIAFGLMK----LDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHF 683

Query: 684 EGGVCSCGDYW 694
           + G CSC DYW
Sbjct: 684 KDGTCSCNDYW 694



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 211/400 (52%), Gaps = 9/400 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           +++   A +L+ CS+   LD G  +    VK G   D  + + LI MYA CG++  A  V
Sbjct: 118 ADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLV 177

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD   E  VV W A++  +L+NG+    + +F  M    V  +E TL + + A G +   
Sbjct: 178 FDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDA 237

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           + G  + G   + G   NP +  +++DMY+KCG I +A R+FD M ++ ++ W+AMI+GY
Sbjct: 238 KLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGY 297

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             A    + L LF +MQ     P++ T  S L AC  LG++  G  +H ++       S+
Sbjct: 298 TQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRL--SL 355

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
            T++  +LVDFY KCGC+ +A   F+ +  K+  +W++LI G A      EA+ELF  +R
Sbjct: 356 TTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMR 415

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGL 367
           E  ++        ++   +   LVE+G++ H  +     G+   V +   +VD+  + GL
Sbjct: 416 EAGIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMARDYGIKPRVEHYGCMVDLLGRAGL 474

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKH---GLAKEAV 403
           +DEA +    MP++ N V W  +++    H   G+ +EA+
Sbjct: 475 VDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/599 (37%), Positives = 347/599 (57%), Gaps = 44/599 (7%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
           N  +IH   +KSG      + N+++D Y KC  + +A  +FD MP +  ++W +++  Y 
Sbjct: 20  NAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYN 79

Query: 191 LAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
            A   +K L +F  M     + PD F + + LKAC SL S+  G Q+H   + S  P+  
Sbjct: 80  QAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLS--PFVD 137

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
             V+  SLVD Y KCG    AR VFD I  K+ +SW++++ GYA+     EAMELF +  
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197

Query: 310 ERSLQ--------------------------------VDGFVLSSMMGVFADFALVEQGK 337
            R+L                                 VD  VLSS++G  A+ A++  GK
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257

Query: 338 QIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           QIH     + SG ++   +SN++VDMY KC  I  A  +FN M  ++VV+WT II G  +
Sbjct: 258 QIHGLV--IGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQ 315

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG AKEA+ L+ +M+L +++P+ V ++ ++ ACSH+GLV + ++ F  +  D R+ P ++
Sbjct: 316 HGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQ 375

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
            ++C +D L R+G L+EA++LI++MP KP    W  LLSAC+ HG+ E+G  + + LL L
Sbjct: 376 LFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSL 435

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           +   P  YV++SN++A AG W +  R+RKL     +K+  G S +++ KE   F+ G+  
Sbjct: 436 NMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETC 495

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           HP+ ++I  +L E++  M++  G++    Y LHD++E+ KE  L  HSE+ A+   L++ 
Sbjct: 496 HPMKDEIFGLLKELDAEMRKR-GYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKA 554

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
                PG VIR+ KNLR+CGDCH F+K  S I+    +VRDATR+H F+ G CSC D+W
Sbjct: 555 ----VPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 141/309 (45%), Gaps = 38/309 (12%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L+ C+    L  G Q+H   V   F  D ++ + L+DMYAKCG  + A +VFD +L 
Sbjct: 108 ATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILV 167

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLF---------------------------CQM---- 104
           +  VSWTA++ G+ ++G     + LF                           C M    
Sbjct: 168 KTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEM 227

Query: 105 ---GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC 161
              G   V P    LS+ + A   L+ +  G QIHG+ + SG+E    + N+++DMY+KC
Sbjct: 228 RREGVDIVDP--LVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKC 285

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
             I  A  +F+ M  + +++W ++I G    G + + L L+ +M      P+E TF   +
Sbjct: 286 SDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLI 345

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
            AC   G V  G ++   +I   +  S    +    +D   + G L EA  +   +  K 
Sbjct: 346 YACSHAGLVSKGRKLFKAMI-EDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKP 404

Query: 282 -VISWSSLI 289
              +W++L+
Sbjct: 405 DEPTWAALL 413



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 13/210 (6%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+   +L  G Q+HG ++  G+   L ++N L+DMYAKC ++  A  VF++ML R+VVSW
Sbjct: 247 CANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSW 306

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T+++ G  Q+G AK  L L+ QM  + +KPNE T    I A      V  G ++    M 
Sbjct: 307 TSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFK-AMI 365

Query: 142 SGFEWNPVVG--NSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSDKG 198
             +  +P +      +D+ S+ G +NEA  +   MP K    TW A+++     G ++ G
Sbjct: 366 EDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMG 425

Query: 199 L-----LLFRKMQEHGEIPDEFTFTSTLKA 223
           +     LL   M E    P  +   S + A
Sbjct: 426 VRIADRLLSLNMHE----PSTYVLLSNVYA 451


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/643 (36%), Positives = 365/643 (56%), Gaps = 39/643 (6%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+  F +    +  LSL+  +  +    + F+    +KA   LS++  G++IHG+  K G
Sbjct: 86  LLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFG 145

Query: 144 F-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           F   +P + +++I MY+ CGRI +A  +FD M  + ++TWN MI GY    + D  L L+
Sbjct: 146 FFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLY 205

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
            +M+  G  PD     + L AC   G++  G  IH F+  +GF   V + I  SLV+ Y 
Sbjct: 206 EEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGF--RVGSHIQTSLVNMYA 263

Query: 263 KCGCL-------------------------------VEARRVFDLIEQKSVISWSSLILG 291
            CG +                                +AR +FD + +K ++ WS++I G
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           YA+     EA++LF +++ R +  D   + S++   A+   + Q K IH YA K   G  
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             ++N+++DMY KCG + +A E+F  MP KNV++W+ +I  +  HG A  A+ LF +M  
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
            ++EP+GV ++ VL ACSH+GLVEE Q++FS + N+ R+ P+ EHY C+VD   RA  L 
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A  LIE+MP  P++ IW +L+SAC+ HG++ELG      LL L+ D+    V++SNI+A
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYA 563

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
               W++   +RKL + KG+ K    S +EV+ E+H F   D  H  +++I++ L  +  
Sbjct: 564 KEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVS 623

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++K  +G+       L D++EE K+E +  HSEK    LAL  G + E+    IR+ KNL
Sbjct: 624 QLK-LVGYTPSTSGILVDLEEEEKKEVVLWHSEK----LALCYGLIGERKESCIRIVKNL 678

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+C DCH F+K +SK+ ++  V+RD TRFH F GG+CSC DYW
Sbjct: 679 RICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 230/462 (49%), Gaps = 44/462 (9%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAK 59
           + R  F L  +R      L+  SK   L+ G+++HG   K GF   D  + + LI MYA 
Sbjct: 106 LRRNGFPL--DRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAA 163

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CG +  A  +FDKM  R+VV+W  ++ G+ QN +    L L+ +M +S  +P+   L T 
Sbjct: 164 CGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTV 223

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--- 176
           + A     ++  G  IH     +GF     +  S+++MY+ CG ++ A  ++D +P+   
Sbjct: 224 LSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHM 283

Query: 177 ----------------------------KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
                                       K L+ W+AMI+GY  +    + L LF +MQ  
Sbjct: 284 VVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRR 343

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             +PD+ T  S + AC ++G++     IH +   +GF  ++   I  +L+D Y KCG LV
Sbjct: 344 RIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLP--INNALIDMYAKCGNLV 401

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR VF+ + +K+VISWSS+I  +A   +   A+ LF +++E++++ +G     ++   +
Sbjct: 402 KAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACS 461

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNS---IVDMYLKCGLIDEATELFNEMPV-KNVV 384
              LVE+G++   +++ +     +        +VD+Y +   + +A EL   MP   NV+
Sbjct: 462 HAGLVEEGQKF--FSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVI 519

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            W  +++    HG  +  +G F    L ++EPD    L VLS
Sbjct: 520 IWGSLMSACQNHG--EIELGEFAATRLLELEPDHDGALVVLS 559



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 179/371 (48%), Gaps = 34/371 (9%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           ++ A  +F  +P       N ++  +      +  L L+  ++ +G   D F+F   LKA
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
              L ++  G +IHG     GF +     I  +L+  Y  CG +++AR +FD +  + V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGF-FHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVV 183

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           +W+ +I GY+Q  +    ++L+ +++    + D  +L +++   A    +  GK IH + 
Sbjct: 184 TWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFI 243

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
                 + + +  S+V+MY  CG +  A E+++++P K++V  T +++GY K G+ ++A 
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDAR 303

Query: 404 GLFRKMLLDD-------------------------------VEPDGVAYLAVLSACSHSG 432
            +F +M+  D                               + PD +  L+V+SAC++ G
Sbjct: 304 FIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVG 363

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            + +++ +     +       +   + ++D   + G L +A+ + E+MP K  I+ W ++
Sbjct: 364 ALVQAK-WIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVIS-WSSM 421

Query: 493 LSACRVHGDLE 503
           ++A  +HGD +
Sbjct: 422 INAFAMHGDAD 432


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 368/662 (55%), Gaps = 40/662 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF+ + E N++ W  +  G   + +  + + L+  M S  + PN +T    +K+   
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR---------------------- 163
           L   + G QIHG  +K G+E +  V  S+I MY K GR                      
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175

Query: 164 ---------INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                    I  A +MFD +P K +++WNA+I+GY   G + + L LF++M +    PDE
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + + AC   GS+  G Q+H ++   G   ++K  I  +L+D Y KCG +  A  +F
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLK--IVNALIDLYSKCGEVETACGLF 293

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             +  K VISW+++I GY       EA+ LF+++       +   + S++   A    ++
Sbjct: 294 QGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAID 353

Query: 335 QGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K   G+   +S+  S++DMY KCG I+ A ++FN M  + +     +I G
Sbjct: 354 FGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFG 413

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A  A  +F +M  + +EPD + ++ +LSACSHSG+++  +  F  +  + ++ P
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITP 473

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LG  G   EA+ +I +M ++P   IW +LL AC++HG++ELG    + L
Sbjct: 474 KLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKL 533

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           ++++ +NP +YV++SNI+A AG WNE   +R L   KG+KKV G S +E+D  +H F  G
Sbjct: 534 IKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP   +I+ +L EME  ++E  GFV      L +++EE K+ +LR HSEKLAI   L
Sbjct: 594 DKFHPRNREIYGMLEEMEVLLEEA-GFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGL 652

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    + +PG  + + KNLRVC +CHE  K +SKI K   + RD TRFH F  GVCSC D
Sbjct: 653 I----STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 708

Query: 693 YW 694
           YW
Sbjct: 709 YW 710



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 229/507 (45%), Gaps = 72/507 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K  +   G Q+HG ++K+G+  DL ++  LI MY K G  
Sbjct: 95  ISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRW 154

Query: 64  NGACAVFD---------------------------KMLE----RNVVSWTALMCGFLQNG 92
             A  VFD                           KM +    ++VVSW A++ G+   G
Sbjct: 155 KDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTG 214

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L LF +M  ++VKP+E T+ T + A     S++ G Q+H      G   N  + N
Sbjct: 215 NNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVN 274

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++ID+YSKCG +  A  +F  +  K +I+WN MI GY       + LLLF++M   GE P
Sbjct: 275 ALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENP 334

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A +
Sbjct: 335 NDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQ 394

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ +  +++ + +++I G+A       A ++F ++R+  ++ D      ++   +   +
Sbjct: 395 VFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454

Query: 333 VEQGKQIH---AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
           ++ G++I        K+   L+      ++D+    GL  EA E+ N M           
Sbjct: 455 LDLGRRIFRSMTQNYKITPKLEH--YGCMIDLLGHLGLFKEAEEMINTMT---------- 502

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
                                   +EPDGV + ++L AC   G VE  + +  +L   + 
Sbjct: 503 ------------------------MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEP 538

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNL 476
             P    Y  + +    AGR +E  N+
Sbjct: 539 ENP--GSYVLLSNIYATAGRWNEVANI 563


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/569 (37%), Positives = 343/569 (60%), Gaps = 3/569 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    + YG  +H  ++K GF+ D+++ +  + MYAKC     A  +FD+M ER+V
Sbjct: 113 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV 172

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++  + Q+G  +  L LF +M  S  KP+  TL+T I +   L  +E G +IH  
Sbjct: 173 ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHME 232

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SGF  +  V ++++DMY KCG +  A  +F+ +  K++++WN+MIAGY L G S   
Sbjct: 233 LVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSC 292

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR+M E G  P   T +S L AC    ++  G  IHG++I +     +   +  SL+
Sbjct: 293 IELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI--FVNSSLI 350

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A  VF  + + +V+SW+ +I GY +  +  EA+ +F  +R+  ++ D  
Sbjct: 351 DLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAI 410

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +S++   +  A++E+GK+IH +  +    ++  V  +++DMY KCG +DEA  +FN++
Sbjct: 411 TFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL 470

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P ++ V+WT +I  YG HG A EA+ LF KM   D +PD V +LA+LSACSH+GLV+E  
Sbjct: 471 PERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGC 530

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACR 497
            YF+++  +   KP +EHYSC++D LGR GRL EA  +++  P ++  + +  TL SAC 
Sbjct: 531 YYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACH 590

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H  L+LG ++G +L+  D D+P  Y+++SN++A    W+E  ++R   +  GLKK  G 
Sbjct: 591 LHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGC 650

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SW+EV K IH F   D +HP  + I++ +
Sbjct: 651 SWIEVGKRIHPFVVEDKSHPQADMIYECM 679



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 284/546 (52%), Gaps = 8/546 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +  +L   L+ C  +  L  G  +H  +V +G   ++ L   LI++Y  C     A  VF
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 71  DKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSS 128
             +    ++  W  LM    +N      L +F ++     +KP+ FT  + +KA   L  
Sbjct: 62  QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V  G  +H   +KSGF  + VV +S + MY+KC    +A ++FD MP + + +WN +I+ 
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISC 181

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G  +K L LF +M+  G  PD  T T+ + +C  L  +  G +IH  L+ SGF  +
Sbjct: 182 YYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--A 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   ++ +LVD Y KCGCL  A+ VF+ I++K+V+SW+S+I GY+ + +    +ELFR++
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            E  ++     LSS++   +    ++ GK IH Y  +     D  V++S++D+Y KCG I
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A  +F  MP  NVV+W V+I+GY K G   EA+ +F  M    V+PD + + +VL AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S   ++E+ +E  + +   K     +     ++D   + G +DEA ++   +P +  ++ 
Sbjct: 420 SQLAVLEKGKEIHNFIIESKLEINEVV-MGALLDMYAKCGAVDEALHIFNQLPERDFVS- 477

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGD-NPVNYVMMSNIHADAGSWNE-CERLRKLA 546
           W ++++A   HG      ++ E + + D   + V ++ + +  + AG  +E C    ++ 
Sbjct: 478 WTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMI 537

Query: 547 RSKGLK 552
              G K
Sbjct: 538 AEYGFK 543



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 207/370 (55%), Gaps = 11/370 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C++ L L+ G ++H  LV+ GF+ D  +++ L+DMY KCG +  A  VF+++ 
Sbjct: 210 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 269

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSW +++ G+   G++K+C+ LF +M    ++P   TLS+ + A     +++ G  
Sbjct: 270 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 329

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  +++  E +  V +S+ID+Y KCG I  A  +F  MP  ++++WN MI+GYV  G 
Sbjct: 330 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGS 389

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L++F  M++ G  PD  TFTS L AC  L  +  G +IH F+I S     +  V+ 
Sbjct: 390 YLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL--EINEVVM 447

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G+L+D Y KCG + EA  +F+ + ++  +SW+S+I  Y       EA++LF ++++   +
Sbjct: 448 GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 507

Query: 315 VDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            D     +++   +   LV++G     + I  Y  K P+       + ++D+  + G + 
Sbjct: 508 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK-PA---VEHYSCLIDLLGRVGRLR 563

Query: 370 EATELFNEMP 379
           EA E+    P
Sbjct: 564 EAYEILQRTP 573



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 22/256 (8%)

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
           +D   L S++    D   ++QGK IH     +    + ++  S++++Y  C L   A  +
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 375 FN--EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS 431
           F   E P+ ++  W  ++    K+ +  E + +F ++L    ++PD   Y +VL ACS  
Sbjct: 61  FQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119

Query: 432 GLVEESQEYFSRLCNDKRMKP----RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           G V      + ++ +   +K      +   S  V    +    ++A  L + MP +  +A
Sbjct: 120 GRVG-----YGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER-DVA 173

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W  ++S     G  E   E+ E  +++ G  P +  + + I       + C RL  L R
Sbjct: 174 SWNNVISCYYQDGQPEKALELFE-EMKVSGFKPDSVTLTTVI-------SSCARLLDLER 225

Query: 548 SKGLKKVAGRSWVEVD 563
            K +     RS   +D
Sbjct: 226 GKEIHMELVRSGFALD 241


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 367/662 (55%), Gaps = 40/662 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF+ + E N + W  ++ G   + +  + L+L+  M S  + PN +T    +K+   
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM---------------------------- 157
             +   G QIHG  +K GF+ +  V  S+I M                            
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 158 ---YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
              Y+  G I  A ++FD +P K +++WNAMI+GY   G   + L LF +M +    PDE
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T+ + L AC   GS+  G Q+H ++   GF  ++K  I  +L+D Y KCG +  A  +F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLK--IVNALIDLYSKCGEVETACGLF 254

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             +  K VISW++LI GY       EA+ LF+++       +   + S++   A    ++
Sbjct: 255 QGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314

Query: 335 QGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K   G+   +S+  S++DMY KCG I+ A ++FN M  K++ +W  +I G
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A  +  LF +M    +EPD + ++ +LSACSHSG+++  +  F  +  D +M P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LG +G   EA+ +I +M ++P   IW +LL AC++HG++EL     + L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           ++++ +NP +Y+++SNI+A AG W +  R+R L   K +KKV G S +EVD  +  F  G
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP   +I+ +L EME  ++E  GFV      L +++EE KE +LR HSEKLAI   L
Sbjct: 555 DKFHPQNREIYGMLEEMEVLLEEA-GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 613

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    + +PG  + + KNLRVC +CHE  K LSKI K   V RD TRFH F  GVCSC D
Sbjct: 614 I----STKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCND 669

Query: 693 YW 694
           YW
Sbjct: 670 YW 671



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+ +  ++ G Q+H  +   GF  +L + N LID+Y+KCGE+  AC +F  +  ++V
Sbjct: 203 LSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDV 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW  L+ G+      K  L LF +M  S   PN+ T+ + + A   L +++ G  IH  
Sbjct: 263 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVY 322

Query: 139 CMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
             K   G      +  S+IDMY+KCG I  A ++F+ M  KSL +WNAMI G+ + G +D
Sbjct: 323 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRAD 382

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
               LF +M++ G  PD+ TF   L AC   G +  G  I   + T  +  + K    G 
Sbjct: 383 ASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM-TQDYKMTPKLEHYGC 441

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQ 307
           ++D     G   EA  + + +E +   + W SL+       N+ E  E F Q
Sbjct: 442 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV-ELAESFAQ 492


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/664 (34%), Positives = 370/664 (55%), Gaps = 11/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  +++    FD++ +N LI  Y KCG +  A  +FD M  RN VS   LM G+  
Sbjct: 30  GKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G     L+L   + ++    NE+ LST + A+  + S   G Q HG  +KSG + +P V
Sbjct: 89  AGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MY +C  + +A ++F+ +    +  +N+MI G++  G  D  + + R M    E
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D  ++ + L  C S   +  G Q+H   +      +V   +  +LVD Y KC C  +A
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNV--YVGSALVDMYGKCDCARDA 263

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
              F+++ +K+V+SW++++  Y Q E   +A++LF  L    ++ + F  +  +   A  
Sbjct: 264 HSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGL 323

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A ++ G  + A A K       SV N++++MY K G I +A  +F  MP ++VV+W  +I
Sbjct: 324 AALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVI 383

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY  HGLA+EA+ +F  MLL ++ P  V ++ VL AC+  GLV+E   Y + +  +  +
Sbjct: 384 IGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGI 443

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           KP  EHY+C+V  L RAGRLDEA+  I S  +   +  W++LLS+C+V+ +  LG  V E
Sbjct: 444 KPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAE 503

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L+L  ++   YV++SN++A A  W+   ++RKL R +G++K  G SW++V  E+H F 
Sbjct: 504 QILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFT 563

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             D  H    +I   L E+  ++K  +G+V      LHD++ E KEE L  HSEK+A+  
Sbjct: 564 SEDKNHKWINQITIKLKELIGQIK-VIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAF 622

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    +   G+ IR+ KNLR+C DCH  IK +S + +   VVRD  RFH  + GVCSC
Sbjct: 623 GLI----HSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSC 678

Query: 691 GDYW 694
            DYW
Sbjct: 679 DDYW 682



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 2/211 (0%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +K LLL  G Q+H   +K     ++ + + L+DMY KC     A + F+ + E+NVVSWT
Sbjct: 222 TKELLL--GCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWT 279

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           A+M  + QN   +  L LF  +    V+PNEFT +  + +   L++++NG  +    MK+
Sbjct: 280 AVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKT 339

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           G      V N++++MYSK G I++A R+F  MP + +++WN++I GY   G + + + +F
Sbjct: 340 GHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVF 399

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
             M     +P   TF   L AC  LG V  G
Sbjct: 400 HDMLLAEIVPSYVTFVGVLLACAQLGLVDEG 430



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 8/174 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A +L  C+    L  G  L  + +K G    L + N L++MY+K G ++ A  VF  M  
Sbjct: 314 AVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPW 373

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW +++ G+  +G A+  + +F  M  + + P+  T    + A   L  V+ G+  
Sbjct: 374 RDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYY 433

Query: 136 HGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMF-------DVMPAKSLIT 181
             + MK  G +        ++ +  + GR++EA +         DV+  KSL++
Sbjct: 434 LNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLS 487


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/725 (32%), Positives = 375/725 (51%), Gaps = 77/725 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN-------------------------- 64
            +QLH  + K+GF  +  + N ++ MY KCG+++                          
Sbjct: 165 AIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQ 224

Query: 65  -----GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
                 A  +F++M ER+ VSW  L+  F Q+G    CL++F +M +    PN  T  + 
Sbjct: 225 MYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSV 284

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A    S ++ G  +H   ++     + V GN +IDMY+KCG ++ A R+F  +     
Sbjct: 285 LSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH 344

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           I+WN++I G V  G  +  L+LF +M+    + DEF   + L  C        G  +HG+
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY 404

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGC-------------------------------LV 268
            I SG   S    +  +++  Y KCG                                + 
Sbjct: 405 TIKSGMGSSAP--VGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIG 462

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR  FD++ ++++++W+S++  Y Q     E ++L+  +R   +Q D    ++ +   A
Sbjct: 463 KARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACA 522

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           D A+V+ G Q+  +A K    L+ SV+NSIV MY +CGLI EA   F+ +  K++++W  
Sbjct: 523 DLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNA 582

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++  + ++GL  + +  F  ML  + +P+ ++Y++VLS CSH GLV E + YF  +    
Sbjct: 583 MLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVF 642

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P  EH+SC+VD LGRAG L++AK+LIE MP KP+  +W  LL +CRVH DL L    
Sbjct: 643 GISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETA 702

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            + L+ LD +    YV++SN+++++G  +    +RKL + KG++   G SW+EVD  +H 
Sbjct: 703 AKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHV 762

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   + +HP  ++++  L EM K M E+ G    V+ ++H         S + HSEKLA 
Sbjct: 763 FTVDETSHPQIKEVYLKLEEMMK-MIEDTGKYITVESSVH--------RSKKYHSEKLAF 813

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L    LN      I V KNLRVC DCH  IK LS +     ++RD  RFH F+ G+C
Sbjct: 814 AFGL----LNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGIC 869

Query: 689 SCGDY 693
           SC DY
Sbjct: 870 SCKDY 874



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 217/430 (50%), Gaps = 35/430 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L +G  LH  +++M  S DL+  N LIDMYAKCG ++ A  VF  + E + 
Sbjct: 285 LSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH 344

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +L+ G +  G  +  L LF QM  SSV  +EF L T +           G  +HG 
Sbjct: 345 ISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY 404

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEA------------------------------A 168
            +KSG   +  VGN+II MY+KCG  ++A                              A
Sbjct: 405 TIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKA 464

Query: 169 R-MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           R  FD+MP ++++TWN+M++ YV  G+S++GL L+  M+ +G  PD  TFT++++AC  L
Sbjct: 465 RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADL 524

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
             V  G Q+      + F  S+   +A S+V  Y +CG + EA+  FD I+ K +ISW++
Sbjct: 525 AIVKLGMQV--VTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNA 582

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           ++  +AQ     + ++ F  + +   + +     S++   +   LV +GK       +V 
Sbjct: 583 MLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVF 642

Query: 348 SGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGL 405
               T+   S +VD+  + GL+++A +L   MP K N   W+ ++     H   + A   
Sbjct: 643 GISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETA 702

Query: 406 FRKMLLDDVE 415
            +K++  DVE
Sbjct: 703 AKKLMELDVE 712



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 230/520 (44%), Gaps = 76/520 (14%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLER--NVVSWTALMCGFLQNGNAKACLSLFCQM---- 104
           N +I        M+ A  +FD+M  R  + VSWT ++ G+ QNG        F  M    
Sbjct: 78  NTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDT 137

Query: 105 --GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
             G  +  P  F+ ++ +KA G L      +Q+H +  K GF     + NS++ MY KCG
Sbjct: 138 NDGGKNYDP--FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCG 195

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI----------- 211
            ++ A  +F  +   SL  WN+MI GY       K L +F +M E  E+           
Sbjct: 196 DVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQ 255

Query: 212 --------------------PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                               P+  T+ S L AC S   +  G  +H  ++     +S+  
Sbjct: 256 HGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILR--MEHSLDL 313

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V    L+D Y KCGCL  A+RVF  + +   ISW+SLI G        +A+ LF Q+R  
Sbjct: 314 VFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRS 373

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           S+ +D F+L +++GV +       G+ +H Y  K   G    V N+I+ MY KCG  D+A
Sbjct: 374 SVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKA 433

Query: 372 TELFNEMPVKNVVTWTVIITG-------------------------------YGKHGLAK 400
             +F  MP++N ++WT +IT                                Y ++G ++
Sbjct: 434 DLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSE 493

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           E + L+  M  + V+PD + +   + AC+   +V+   +  +       +   +   + I
Sbjct: 494 EGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTH-ATKFGLSLNVSVANSI 552

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           V    R G + EAKN  +S+  K  I+ W  +L+A   +G
Sbjct: 553 VTMYSRCGLIKEAKNTFDSIDDKDLIS-WNAMLAAFAQNG 591



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 212/501 (42%), Gaps = 79/501 (15%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCG------------------------------- 162
           ++H   + SG + +  + N+++ MYS CG                               
Sbjct: 29  KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88

Query: 163 RINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGL----LLFRKMQEHGEIPDEFT 216
           R+++A ++FD MP   K  ++W  MI+GY   G+  +      L+ R   + G+  D F+
Sbjct: 89  RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           FTS +KACGSLG      Q+H  +   GF   ++T I  S+V  YVKCG +  A  VF  
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGF--GMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS----------LQVDGF-------- 318
           IE+ S+  W+S+I GY+Q     +A+++F ++ ER               GF        
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 319 -------------VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                           S++   A  + ++ G  +HA   ++   LD    N ++DMY KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +D A  +F  +   + ++W  +ITG    GL ++A+ LF +M    V  D      +L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
             CS       + E          M       + I+    + G  D+A  +   MP++ +
Sbjct: 387 GVCSGPDYA-STGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
           I+ W  +++A    GD+   R   +++      N V +  M + +   G   E  +L   
Sbjct: 446 IS-WTAMITAFSRSGDIGKARGYFDMMPE---RNIVTWNSMLSTYVQNGFSEEGLKLYVS 501

Query: 546 ARSKGLKKVAGRSWVEVDKEI 566
            RS G++      W+     I
Sbjct: 502 MRSNGVQP----DWITFTTSI 518


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/570 (38%), Positives = 340/570 (59%), Gaps = 11/570 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G ++H   +K+ +  +  +   +I +Y+KC  + +A  MFD MP +++++W AMI+
Sbjct: 77  AIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMIS 136

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSGFP 246
            Y   G++ + L LF +M      P+ FTF + L +C GSLG    G QIH   I     
Sbjct: 137 AYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHSIAIKRN-- 193

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           Y     +  SL+D Y K G + +A  VF  + ++ V++ +++I GYAQ     EA++LFR
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           QL+   +  +    +S++   +  A +  GKQ+H++  +        + NS++DMY KCG
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVL 425
            +  A  +F+ MP +  ++W  ++ GY KHG+A+E + LF+ M  ++ V+PD + YLAVL
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373

Query: 426 SACSHSGLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           S CSH  L +   E F  + N K  ++P I HY C+VD LGRAGR++EA + I+ MP  P
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           + AIW +LL +CRVH D+E+G  VG+ LL L+ +N  NYV++SN++A AG W +   +R 
Sbjct: 434 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRD 493

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           L + K + K  GRSWVE+D+ +H F+  D THP  E++   + E+  + KE+ G+V  + 
Sbjct: 494 LMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKED-GYVPDLS 552

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             L+D+ EE KE+ L  HSEKLA+   L+        G  IRV KNLR+C DCH F K +
Sbjct: 553 CVLYDVDEEQKEKVLLGHSEKLALAFGLI----ATPEGTTIRVIKNLRICVDCHSFAKFV 608

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S++     ++RD  RFH   GGVCSCGDYW
Sbjct: 609 SRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 220/409 (53%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     +  G ++H  ++K  +   + L   LI +Y KC  +  A  +FD+M +RNVVSW
Sbjct: 72  CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSW 131

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++  + Q G A   L+LF +M  S  +PN FT +T + +       E G QIH + +K
Sbjct: 132 TAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIK 191

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
             +E +  VG+S++DMY+K GRI +A  +F  +P + ++   A+I+GY   G  ++ L L
Sbjct: 192 RNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKL 251

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           FR++Q  G   +  T+ S L A   L ++  G Q+H  ++ SG  YS   V+  SL+D Y
Sbjct: 252 FRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSG-QYSY-VVLLNSLIDMY 309

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVL 320
            KCG +  ARR+FD + +++ ISW+++++GY++     E +ELF+ +RE + ++ D    
Sbjct: 310 SKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITY 369

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   L + G +I         G++  + +   +VD+  + G ++EA +   +M
Sbjct: 370 LAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKM 429

Query: 379 P-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P V     W  ++     H   +  + + +K+L  ++EP+      +LS
Sbjct: 430 PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL--ELEPENAGNYVILS 476



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 144/280 (51%), Gaps = 8/280 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C  +L  + G Q+H   +K  +   + + + L+DMYAK G +  A  VF  + 
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VV+ TA++ G+ Q G  +  L LF Q+    +  N  T ++ + A   L+++ +G Q
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++SG     V+ NS+IDMYSKCG +  A R+FD MP ++ I+WNAM+ GY   G 
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + + L LF+ M+E  ++ PD  T+ + L  C        G +I   ++            
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLI 289
            G +VD   + G + EA   FD I++   +     W SL+
Sbjct: 406 YGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLL 442


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/580 (38%), Positives = 341/580 (58%), Gaps = 9/580 (1%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV-GNSIIDMYSKCGRINE 166
           S+ P+    S  +K    L  VE G  +H   + S F  N +V  N I++MY+KCG +++
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDD 141

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A RMFD MP K ++TW A+IAG+         LLLF +M   G  P+ FT +S LKA GS
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
              +  GTQ+H F +  G+  SV   +  +LVD Y +CG +  A+  FD +  KS +SW+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSV--YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWN 259

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           +LI G+A++     A+ L  +++ ++ Q   F  SS++   A    +EQGK +HA+  K 
Sbjct: 260 ALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS 319

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
              L   + N+++DMY K G ID+A  +F+ +   +VV+W  ++TG  +HGL KE +  F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   +EP+ +++L VL+ACSHSGL++E   YF  L    +++P + HY   VD LGR
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGR 438

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            G LD A+  I  MP++P+ A+W  LL ACR+H ++ELG    E    LD  +    +++
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SNI+A AG W +  ++RK+ +  G+KK    SWVE++  +H F   D+THP  ++I    
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKW 558

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            E+  ++K E+G+V    + L  + ++ +EE L+ HSEKLA+  AL    LN   G  IR
Sbjct: 559 EEISGKIK-EIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFAL----LNTPTGSPIR 613

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           + KN+RVCGDCH  IK +SK++    +VRD  RFHRF  G
Sbjct: 614 IKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 212/386 (54%), Gaps = 4/386 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNG 65
           SLV +    +  L+ C++   ++ G  +H  LV   F    L+L N +++MYAKCG ++ 
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDD 141

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+M  +++V+WTAL+ GF QN   +  L LF QM     +PN FTLS+ +KASG 
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS 201

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
              ++ G Q+H  C+K G++ +  VG++++DMY++CG ++ A   FD MP KS ++WNA+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I+G+   G  +  L L  KMQ     P  FT++S L AC S+G++  G  +H  +I SG 
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGL 321

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              +   I  +L+D Y K G + +A+RVFD + +  V+SW++++ G AQ     E ++ F
Sbjct: 322 --KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            Q+    ++ +      ++   +   L+++G        K     D     + VD+  + 
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV 439

Query: 366 GLIDEATELFNEMPVK-NVVTWTVII 390
           GL+D A     EMP++     W  ++
Sbjct: 440 GLLDRAERFIREMPIEPTAAVWGALL 465



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 165/311 (53%), Gaps = 6/311 (1%)

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GL     +Q    +PD   ++  LK C  LG V  G  +H  L+ S F      V+   +
Sbjct: 71  GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNII 129

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           V+ Y KCGCL +ARR+FD +  K +++W++LI G++Q     +A+ LF Q+     Q + 
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH 189

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F LSS++        ++ G Q+HA+  K        V +++VDMY +CG +D A   F+ 
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP K+ V+W  +I+G+ + G  + A+ L  KM   + +P    Y +VLSAC+  G +E+ 
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +   + +     +K      + ++D   +AG +D+AK + + + VKP +  W T+L+ C 
Sbjct: 310 KWVHAHMIKSG-LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCA 367

Query: 498 VHGDLELGREV 508
            HG   LG+E 
Sbjct: 368 QHG---LGKET 375


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/564 (37%), Positives = 339/564 (60%), Gaps = 7/564 (1%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G   H   +  G + + +  N +I+MYSKCG ++ A ++FD MP++SL++WN MI    
Sbjct: 82  QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G  ++ L L  +MQ  G    EFT +S L AC +  ++     +H F I +    +V 
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNV- 200

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +A +L+D Y KCG + +A  VF+ +  +SV++WSS+  GY Q E   +A+ LFR+  E
Sbjct: 201 -FVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWE 259

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L+ D F++SS++   A  A + +GKQ++A  +K     +  V++S++DMY KCG I+E
Sbjct: 260 TGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEE 319

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + ++F ++  +NVV W  +I+G  +H  + E + LF KM    + P+ V +++VLSAC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLV++ Q+YF  +  +  + P + HYSC+VD+L RAG++ EA +LI  +P   S ++W 
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL++CR HG+LEL     + L  ++  N  NY+++SN++A  G W+E  ++RKL +   
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G+SW+E+  ++H F  G+  HP   +I+  L E+   + ++LG+    ++ LH +
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDEL-QKLGYKVETQHDLHQV 558

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            E  K+E LR HSEKLA  + L    L   P   IR+ KNLR+CGDCH F+K  SK    
Sbjct: 559 GESIKQELLRHHSEKLAFTMGL----LFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCR 614

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD  RFH F+ G CSCGD+W
Sbjct: 615 DVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 217/413 (52%), Gaps = 12/413 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+K  LL  G   H  ++ MG   DL+ +N LI+MY+KCG ++ A  VFD+M  R++
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++    QNG     L L  QM       +EFT+S+ + A     ++     +H  
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + N  V  +++D+Y+KCG + +A  +F+ MP +S++TW++M AGYV     ++ 
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LFRK  E G   D+F  +S + AC  L ++  G Q++  L  SGF  ++   +A SL+
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNI--FVASSLI 308

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG + E+ +VF  +E+++V+ W+++I G ++     E M LF ++++  L  +  
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              S++       LV++G++      K     P+    S    +VD   + G I EA +L
Sbjct: 369 TFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSC---MVDTLSRAGQIFEAYDL 425

Query: 375 FNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +++P     + W  ++     HG  + A    +K+   D+EP       +LS
Sbjct: 426 ISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLS 476



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           L+ QGK  HA    +    D   SN +++MY KCG +D A ++F+EMP +++V+W  +I 
Sbjct: 79  LLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIG 138

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
              ++G   EA+ L  +M  +          +VL AC+    + E Q           M 
Sbjct: 139 SLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ-LLHAFAIKAAMD 197

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD-----LELGR 506
             +   + ++D   + G + +A  + ESMP + S+  W + ++A  V  +     L L R
Sbjct: 198 LNVFVATALLDVYAKCGLMKDAVCVFESMPDR-SVVTWSS-MAAGYVQNEMYEQALALFR 255

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAG 534
           +  E  L+ D      ++M S I A AG
Sbjct: 256 KAWETGLKHD-----QFLMSSVICACAG 278


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/664 (35%), Positives = 364/664 (54%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           GV LH   +  G + +L + + ++D+Y K      A  VFD M ER+ V W  ++ GF +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  + +F  M    +  +  TL+T + A   L     GM I  +  K G   +  V
Sbjct: 192 NSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
              +I +YSKCG+  +   +FD +    LI++NAMI+GY     ++  + LFR++   G+
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ 311

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             +  T    +        +     I    +  G    ++  ++ +L   Y +   +  A
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI--ILQPSVSTALTTVYCRLNEVQFA 369

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD   +KS+ SW+++I GY Q      A+ LF+++  + L  +   ++S++   A  
Sbjct: 370 RQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +  GK +H          +  VS ++VDMY KCG I EA +LF+ M  KNVVTW  +I
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           TGYG HG  KEA+ LF +ML   + P GV +L++L ACSHSGLV E  E F  + N+   
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C+VD LGRAG+L  A   IE MP++P  A+W  LL AC +H + E+     +
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASK 608

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L +LD +N   YV++SNI++   ++ +   +R++ + + L K  G + +E+D + + F 
Sbjct: 609 RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFT 668

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP    I ++L ++  +M+E       V  ALHD+++E KE  + VHSEKLAI  
Sbjct: 669 SGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAF 728

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    + +PG  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ G+CSC
Sbjct: 729 GLI----STKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSC 784

Query: 691 GDYW 694
           GDYW
Sbjct: 785 GDYW 788



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 247/503 (49%), Gaps = 11/503 (2%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q+   L+  G  +DL     L   +   G +     +F+K+ + ++  +  L+ GF  N
Sbjct: 31  LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90

Query: 92  GNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           G  K+ + L+  +   ++++P+ FT +  I A+  L     G+ +H   +  G   N  V
Sbjct: 91  GLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++I+D+Y K  R   A ++FDVMP +  + WN MI+G+    Y +  + +F  M + G 
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D  T  + L A   L     G  I       G  +S   V+ G L+  Y KCG   + 
Sbjct: 211 SFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL-HSDVYVLTG-LISLYSKCGKSCKG 268

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +FD I+Q  +IS++++I GY        A+ LFR+L     +V+   L  ++ V+  F
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             ++  + I   + K+   L  SVS ++  +Y +   +  A +LF+E P K++ +W  +I
Sbjct: 329 NHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMI 388

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +GY ++GL   A+ LF++M +  + P+ V   ++LSAC+  G +   + +   L   +R+
Sbjct: 389 SGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGK-WVHGLIKSERL 446

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  +   + +VD   + G + EA+ L + M V  ++  W  +++   +HG    G+E  +
Sbjct: 447 ESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALK 502

Query: 511 ILLRL--DGDNPVNYVMMSNIHA 531
           +   +   G  P     +S ++A
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYA 525



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +HG +       ++ ++  L+DMYAKCG +  A  +FD M+++NV
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W A++ G+  +G+ K  L LF +M  S + P   T  + + A      V  G +I H 
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M    GF+        ++D+  + G++  A    + MP +     W A++  
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/664 (35%), Positives = 364/664 (54%), Gaps = 7/664 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           GV LH   +  G + +L + + ++D+Y K      A  VFD M ER+ V W  ++ GF +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N   +  + +F  M    +  +  TL+T + A   L     GM I  +  K G   +  V
Sbjct: 192 NSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYV 251

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
              +I +YSKCG+  +   +FD +    LI++NAMI+GY     ++  + LFR++   G+
Sbjct: 252 LTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQ 311

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             +  T    +        +     I    +  G    ++  ++ +L   Y +   +  A
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI--ILQPSVSTALTTVYCRLNEVQFA 369

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD   +KS+ SW+++I GY Q      A+ LF+++  + L  +   ++S++   A  
Sbjct: 370 RQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +  GK +H          +  VS ++VDMY KCG I EA +LF+ M  KNVVTW  +I
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           TGYG HG  KEA+ LF +ML   + P GV +L++L ACSHSGLV E  E F  + N+   
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P  EHY+C+VD LGRAG+L  A   IE MP++P  A+W  LL AC +H + E+     +
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASK 608

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L +LD +N   YV++SNI++   ++ +   +R++ + + L K  G + +E+D + + F 
Sbjct: 609 RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFT 668

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP    I ++L ++  +M+E       V  ALHD+++E KE  + VHSEKLAI  
Sbjct: 669 SGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAF 728

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    + +PG  IR+ KNLRVC DCH   K +SKI + V VVRDA RFH F+ G+CSC
Sbjct: 729 GLI----STKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSC 784

Query: 691 GDYW 694
           GDYW
Sbjct: 785 GDYW 788



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 247/503 (49%), Gaps = 11/503 (2%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q+   L+  G  +DL     L   +   G +     +F+K+ + ++  +  L+ GF  N
Sbjct: 31  LQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90

Query: 92  GNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           G  K+ + L+  +   ++++P+ FT +  I A+  L     G+ +H   +  G   N  V
Sbjct: 91  GLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFV 150

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++I+D+Y K  R   A ++FDVMP +  + WN MI+G+    Y +  + +F  M + G 
Sbjct: 151 GSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGL 210

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D  T  + L A   L     G  I       G  +S   V+ G L+  Y KCG   + 
Sbjct: 211 SFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL-HSDVYVLTG-LISLYSKCGKSCKG 268

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +FD I+Q  +IS++++I GY        A+ LFR+L     +V+   L  ++ V+  F
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             ++  + I   + K+   L  SVS ++  +Y +   +  A +LF+E P K++ +W  +I
Sbjct: 329 NHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMI 388

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +GY ++GL   A+ LF++M +  + P+ V   ++LSAC+  G +   + +   L   +R+
Sbjct: 389 SGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGK-WVHGLIKSERL 446

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  +   + +VD   + G + EA+ L + M V  ++  W  +++   +HG    G+E  +
Sbjct: 447 ESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH---GKEALK 502

Query: 511 ILLRL--DGDNPVNYVMMSNIHA 531
           +   +   G  P     +S ++A
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYA 525



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +HG +       ++ ++  L+DMYAKCG +  A  +FD M+++NV
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W A++ G+  +G+ K  L LF +M  S + P   T  + + A      V  G +I H 
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M    GF+        ++D+  + G++  A    + MP +     W A++  
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGA 593


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/708 (34%), Positives = 384/708 (54%), Gaps = 42/708 (5%)

Query: 21   CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
            C     + D G Q+HG +VK G   D+ +   L+  Y   G +  A  +F++M + NVVS
Sbjct: 384  CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 443

Query: 81   WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            WT+LM G+  +GN    L+++ +M    V  N+ T +T   + G+L     G Q+ G  +
Sbjct: 444  WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 503

Query: 141  KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
            + GFE +  V NS+I M+S    + EA  +FD M    +I+WNAMI+ Y   G   + L 
Sbjct: 504  QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 563

Query: 201  LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
             F  M+      +  T +S L  C S+ ++  G  IHG ++  G   +V   I  +L+  
Sbjct: 564  CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV--CICNTLLTL 621

Query: 261  YVKCGCLVEARRVFDLIEQKSVISWSS--------------------------------- 287
            Y + G   +A  VF  + ++ +ISW+S                                 
Sbjct: 622  YSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWN 681

Query: 288  -LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
             LI G+A+ E   EA++ ++ +RE+ +  +   + S+    A+ A++E+G+Q+H    K+
Sbjct: 682  ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAAT-ANLAVLEEGQQLHGLVIKL 740

Query: 347  PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                D  V+N+ +DMY KCG + +  ++  +   ++ ++W ++I+ + +HG  ++A   F
Sbjct: 741  GFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETF 800

Query: 407  RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             +ML    +PD V ++++LSAC+H GLV+E   Y+  +  +  + P IEH  CI+D LGR
Sbjct: 801  HEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGR 860

Query: 467  AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            +GRL  A+  I+ MPV P+   W++LL+ACR+HG+LEL R+  E LL LD  +   YV+ 
Sbjct: 861  SGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLY 920

Query: 527  SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
            SN+ A +G W + E LRK   S  +KK    SWV++  ++H F  G+  HP   +I   L
Sbjct: 921  SNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKL 980

Query: 587  MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
             E+ K M +E G+V    +ALHD+ EE KE +L  HSE+LA+   L+    N      +R
Sbjct: 981  GELMK-MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLI----NTPESSTLR 1035

Query: 647  VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +FKNLRVCGDCH   K +S I+    V+RD  RFH F GG CSCGDYW
Sbjct: 1036 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 227/513 (44%), Gaps = 126/513 (24%)

Query: 8   LVSERQRLADSLRCCSKNLLLD-----YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           L S   RL  SL      L +D      G  +H  L+  GF  DL LN  LI  Y K G+
Sbjct: 21  LSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGD 80

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           +  A  VFD M ER+VVSWTA++ G+ QNG  +    LF  M    VK N          
Sbjct: 81  VIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN---------- 130

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
                                        ++++D +SKCG++ +A+ +F  M  + +++W
Sbjct: 131 -----------------------------HALVDFHSKCGKMEDASYLFGTMMERDVVSW 161

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NAMI GY + G++D    +FR M   G +PD +T  S L+A    G +    QIHG +  
Sbjct: 162 NAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQ 221

Query: 243 SGFP----------------------------------YSVKTVIAG-----------SL 257
            G+                                   +S   +I G           +L
Sbjct: 222 LGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNAL 281

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE--ENLAEAMELFRQLRERS--- 312
           +D Y K G + +A+R FD +E+K+VISW+SLI GYA+    ++A A  +F ++R R+   
Sbjct: 282 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEAS 341

Query: 313 ----------------------------LQVDGFVLSSMMGVFADFA-LVEQGKQIHAYA 343
                                       ++ +GF+++S++   +    + ++G Q+H + 
Sbjct: 342 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 401

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D  V  ++V  Y   GL+  A +LF EMP  NVV+WT ++ GY   G   E +
Sbjct: 402 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 461

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            ++++M  + V  +   +  V S+C   GL+E+
Sbjct: 462 NVYQRMRQEGVSGNQNTFATVTSSC---GLLED 491



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 281/643 (43%), Gaps = 129/643 (20%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLM------------------ 48
           LV +   L   LR  ++   L    Q+HG + ++G+ S+D++                  
Sbjct: 189 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248

Query: 49  ----------------------------LNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
                                       + N LIDMYAK GE+  A   FD+M E+NV+S
Sbjct: 249 DLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 308

Query: 81  WTALMCGFLQNGNA---------------------------------KACLSLFCQMGSS 107
           WT+L+ G+ ++G                                   +  + LFCQM   
Sbjct: 309 WTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 368

Query: 108 SVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
            V+PN F +++ I A   SG ++  + G Q+HG  +K+G   +  VG +++  Y   G +
Sbjct: 369 GVEPNGFMVASLITACSRSGYMA--DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 426

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             A ++F+ MP  ++++W +++ GY  +G   + L ++++M++ G   ++ TF +   +C
Sbjct: 427 YNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 486

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
           G L     G Q+ G +I  GF  SV   +A SL+  +     + EA  VFD + +  +IS
Sbjct: 487 GLLEDQVLGYQVLGHIIQYGFEDSVS--VANSLISMFSSFSSVEEACYVFDHMNECDIIS 544

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I  YA      E++  F  +R    + +   LSS++ V +    ++ G+ IH    
Sbjct: 545 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 604

Query: 345 KVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNV------------------- 383
           K+  GLD++V   N+++ +Y + G  ++A  +F  M  +++                   
Sbjct: 605 KL--GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDG 662

Query: 384 ---------------VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
                          VTW  +I G+ ++    EAV  + K++ +   P     +  L+A 
Sbjct: 663 LKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAY-KLIREKGIPANYITMVSLAAT 721

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           ++  ++EE Q+    L      +  +   +  +D  G+ G + +   ++   P+  S   
Sbjct: 722 ANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLS 779

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           W  L+SA   HG  +  RE    +L+L G  P +   +S + A
Sbjct: 780 WNILISAFARHGCFQKARETFHEMLKL-GPKPDHVTFVSLLSA 821



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 13/252 (5%)

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           NL    E  + L     ++D  +   ++ +  D    +QG  IH +      G D  ++ 
Sbjct: 10  NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            ++  Y+K G +  A  +F+ MP ++VV+WT +++GY ++G  ++A  LF  M    V+ 
Sbjct: 70  KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK- 128

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
              A  A++   S  G +E++   F  +     M+  +  ++ ++      G  D++  +
Sbjct: 129 ---ANHALVDFHSKCGKMEDASYLFGTM-----MERDVVSWNAMIGGYAVQGFADDSFCM 180

Query: 477 IESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD-GDNPVNYVMMSNIHAD 532
             SM    + P      ++L A    G L +  ++  I+ +L  G   +   ++ N +A 
Sbjct: 181 FRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAK 240

Query: 533 AGSWNECERLRK 544
            GS    + LRK
Sbjct: 241 NGSLRSAKDLRK 252


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/656 (35%), Positives = 371/656 (56%), Gaps = 40/656 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF  + E N +SW  ++ G   + +  + L+L+  M S  + PN +T     K+   
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG----------------------- 162
             + + G QIH   +K G   +  V  S+I MY++ G                       
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 163 --------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                    +++A +MFD +P K +++WNAMI+GY   G   + L LF +M +    PDE
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + L  C   G+V  G QIH ++   GF  ++K V   +L+D Y KCG +  A  +F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV--NALIDLYSKCGEMERAHGLF 268

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           + ++ K VISW++LI GYA   +  EA+ +F+++ +     +   + S++   A    ++
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328

Query: 335 QGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K   G+  +TS+  S++DMY KCG I+ A ++F+ +  K++ +   +I G
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A  A  L  +M  D +EPD + ++ +LSACSH+GL +  ++ F  +  D R++P
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LGR+G   EA+ LI SM ++P   IW +LL AC++H +LELG  + + L
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKL 508

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           ++++  NP +YV++SNI+A +  W++  R+R L   KGLKKV G S +E+D  +H F  G
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP  ++I+++L E++  + E  GFV      L +++EE KE +L  HSEKLAI   L
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLLAET-GFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGL 627

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
           +    + +PG  +R+ KNLRVC +CHE  K +SKI K   + RD +RFH F+ G+C
Sbjct: 628 I----STKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 218/471 (46%), Gaps = 45/471 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            + C+K+     G Q+H  ++K G + DL ++  LI MYA+ G +  A  VFD    R+V
Sbjct: 85  FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144

Query: 79  VSWTALMCGFLQNGNA-------------------------------KACLSLFCQMGSS 107
           VS+TA++ G+   GN                                K  L LF +M   
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            VKP+E T++T +       +VE G QIH      GF  N  + N++ID+YSKCG +  A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ +  K +I+WN +I GY    +  + LL+F++M + GE P++ T  S L AC  L
Sbjct: 265 HGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G  IH ++          T +  SL+D Y KCG +  A +VFD I  KS+ S ++
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNA 384

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I G+A       A +L  ++++  ++ D      ++   +   L + G++I        
Sbjct: 385 MIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMT--- 441

Query: 348 SGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
             LD  +   +      +D+  + GL  EA EL N M ++ + V W  ++     H   +
Sbjct: 442 --LDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLE 499

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
               + +K++   +EP       +LS    +    +       L NDK +K
Sbjct: 500 LGELIAQKLM--KIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLK 548



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 7/301 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +   +A  L  C+ +  ++ G Q+H  +   GF  +L L N LID+Y+KCGEM  A  +F
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           + +  ++V+SW  L+ G+    + K  L +F +M      PN+ T+ + + A   L +++
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328

Query: 131 NGMQIHGMCMK--SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
            G  IH    K   G   N  +  S+IDMY+KCG I  A ++FD +  KSL + NAMI G
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           + + G +D    L  +M++ G  PD+ TF   L AC   G    G +I   + T  +   
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSM-TLDYRIE 447

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            K    G ++D   + G   EA  + +   +E   VI W SL+      +NL E  EL  
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVI-WGSLLKACKIHKNL-ELGELIA 505

Query: 307 Q 307
           Q
Sbjct: 506 Q 506


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/662 (33%), Positives = 388/662 (58%), Gaps = 9/662 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++K GFS+   L + LID Y KCG +  A  +FD++  R++V+W +++   + +G 
Sbjct: 23  VHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGK 81

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE-WNPVVGN 152
           +K  +  +  M    V P+ +T S   KA   L  + +G + HG+ +  G E  +  V +
Sbjct: 82  SKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVAS 141

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMY+K  ++ +A  +F  +  K ++ + A+I GY   G   + L +F  M   G  P
Sbjct: 142 ALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKP 201

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +E+T    L  CG+LG +  G  IHG ++ SG    V +    SL+  Y +C  + ++ +
Sbjct: 202 NEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS--QTSLLTMYSRCNMIEDSIK 259

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ ++  + ++W+S ++G  Q      A+ +FR++   S+  + F LSS++   +  A+
Sbjct: 260 VFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAM 319

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E G+QIHA   K+    +     +++++Y KCG +D+A  +F+ +   +VV    +I  
Sbjct: 320 LEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYA 379

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y ++G   EA+ LF ++    + P+GV ++++L AC+++GLVEE  + F+ + N+  ++ 
Sbjct: 380 YAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIEL 439

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            I+H++C++D LGR+ RL+EA  LIE +   P + +W+TLL++C++HG++E+  +V   +
Sbjct: 440 TIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKI 498

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L L   +   +++++N++A AG WN+   ++   R   LKK    SWV+VD+E+H F  G
Sbjct: 499 LELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAG 558

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP + +I ++L  + K++K  LG+    ++ L D+ EE K  SL  HSEKLAI  AL
Sbjct: 559 DLSHPRSLEIFEMLHGLMKKVK-TLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYAL 617

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
            +          IR+FKNLRVCGDCH +IK +S +     + RD+ RFH F+GG+CSC D
Sbjct: 618 WK---TIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKD 674

Query: 693 YW 694
           YW
Sbjct: 675 YW 676



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 142/261 (54%), Gaps = 5/261 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +HG +VK G    +     L+ MY++C  +  +  VF+++   N V+WT+ + G +Q
Sbjct: 222 GQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQ 281

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  +S+F +M   S+ PN FTLS+ ++A   L+ +E G QIH + MK G + N   
Sbjct: 282 NGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYA 341

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G ++I++Y KCG +++A  +FDV+    ++  N+MI  Y   G+  + L LF +++  G 
Sbjct: 342 GAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGL 401

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLV 268
           +P+  TF S L AC + G V  G QI   +  +   ++++  I     ++D   +   L 
Sbjct: 402 VPNGVTFISILLACNNAGLVEEGCQIFASIRNN---HNIELTIDHFTCMIDLLGRSRRLE 458

Query: 269 EARRVFDLIEQKSVISWSSLI 289
           EA  + + +    V+ W +L+
Sbjct: 459 EAAMLIEEVRNPDVVLWRTLL 479



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+ CS   +L+ G Q+H   +K+G   +      LI++Y KCG M+ A +VFD + 
Sbjct: 307 LSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLT 366

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E +VV+  +++  + QNG     L LF ++ +  + PN  T  + + A      VE G Q
Sbjct: 367 ELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQ 426

Query: 135 IHGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           I      +   E        +ID+  +  R+ EAA + + +    ++ W  ++
Sbjct: 427 IFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLL 479


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 327/561 (58%), Gaps = 7/561 (1%)

Query: 134  QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            + H      G +++  +      MY    RI+ A+ +F+ +P      WN MI G+   G
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 194  YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                 L L+ KM E G  PD+F F   LK+C  L  +  G  IH  L+  G   S    +
Sbjct: 798  RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG--CSNDLFV 855

Query: 254  AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              +LVD Y KCG +  AR VFD +  + ++SW+S+I GYA     +E +  F  +R   +
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 314  QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
              +   + S++    +   + +G+  H+Y  +     D  V+ +I+DMY KCG +D A  
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 374  LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            LF+E   K++V W+ +I  YG HG  ++A+ LF +M+   V P  V +  VLSACSHSGL
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 434  VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            +EE + YF  +  +  +  ++ +Y+C+VD LGRAG+L EA +LIE+MPV+P  +IW +LL
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095

Query: 494  SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
             ACR+H +L+L  ++ + L  LD  +   +V++SNI+A    WNE E++RK+   +G  K
Sbjct: 1096 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 1155

Query: 554  VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
            + G S VE D ++H F  GD +HP  EK++  L E+   MK  LG+V    + LHDI+EE
Sbjct: 1156 IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMK-HLGYVPLTDFVLHDIEEE 1214

Query: 614  SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            +KE +L  HSE+LAI   L+    N  PG  +R+ KNLR+CGDCH  IK +SKI+  V +
Sbjct: 1215 AKEAALSYHSERLAIAFGLI----NTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVIL 1270

Query: 674  VRDATRFHRFEGGVCSCGDYW 694
            VRD  RFHRFE GVCSCGDYW
Sbjct: 1271 VRDMHRFHRFEDGVCSCGDYW 1291



 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 344/597 (57%), Gaps = 10/597 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           +L+ C+   +L+ G  +HG   K      D+ + + L+++Y+KCG+M  A  VF++    
Sbjct: 109 ALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP 168

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           + V WT+++ G+ QN + +  L+LF QM     V  +  TL + + A   L +V+ G  +
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCV 228

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ ++  F+ +  + NS++++Y+K G    AA +F  MP K +I+W+ MIA Y     +
Sbjct: 229 HGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAA 288

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP--YSVKTVI 253
           ++ L LF +M E    P+  T  S L+AC    ++  G +IH   +  GF   +SV T  
Sbjct: 289 NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST-- 346

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+D Y+KC C  EA  +F  + +K V+SW +L+ GYAQ     ++M +FR +    +
Sbjct: 347 --ALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 404

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           Q D   +  ++   ++  + +Q   +H Y  +     +  V  S++++Y KCG + +A +
Sbjct: 405 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 464

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHSG 432
           LF  M V++VV W+ +I  YG HG   EA+ +F +M+ +  V P+ V +L++LSACSH+G
Sbjct: 465 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAG 524

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           LVEE  + F R+ +D +++P  EH+  +VD LGR G+L +A ++I  MP+     +W  L
Sbjct: 525 LVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGAL 584

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           L ACR+H ++E+G    + L  LD  +   Y+++SNI+A  G W+    LR   + +GLK
Sbjct: 585 LGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLK 644

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           K+ G+S VEV   +H F   D  HP ++KI+++L ++E +M +E+ ++  + + LHD
Sbjct: 645 KMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEV-YIPDLDFLLHD 700



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 268/529 (50%), Gaps = 22/529 (4%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           RQ L D  + C+    +    QLH  + K G   D      L  +YAKC  +  A  VFD
Sbjct: 4   RQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLF----CQMGSSSVKPNEFTLSTNIKASGVLS 127
           +    NV  W + +  + +    +  L LF    C  G +   P+ FT+   +KA   L 
Sbjct: 61  ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA---PDNFTIPIALKACAGLR 117

Query: 128 SVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +E G  IHG   K+     +  VG++++++YSKCG++ EA ++F+       + W +M+
Sbjct: 118 MLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMV 177

Query: 187 AGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            GY      ++ L LF +M      + D  T  S + AC  L +V  G+ +HG +I   F
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREF 237

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              +  V   SL++ Y K GC   A  +F  + +K VISWS++I  YA  E   EA+ LF
Sbjct: 238 DGDLPLV--NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLF 295

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++ E+  + +   + S +   A    +E+GK+IH  A      LD SVS +++DMY+KC
Sbjct: 296 HEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC 355

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
              DEA +LF  +P K+VV+W  +++GY ++G+A +++G+FR ML D ++PD VA + +L
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415

Query: 426 SACSHSGLVEES---QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           +A S  G+ +++     Y  R          +   + +++   + G L +A  L + M V
Sbjct: 416 AASSELGIFQQALCLHGYVVR----SGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV 471

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +  + IW ++++A  +HG      E+ + +++     P N   +S + A
Sbjct: 472 R-DVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 196/372 (52%), Gaps = 12/372 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C++ L +  G  +HG +++  F  DL L N L+++YAK G    A  +F KM 
Sbjct: 209 LVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 268

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E++V+SW+ ++  +  N  A   L+LF +M     +PN  T+ + ++A  V  ++E G +
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +  GFE +  V  ++IDMY KC   +EA  +F  +P K +++W A+++GY   G 
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGM 388

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           + K + +FR M   G  PD       L A   LG       +HG+++ SGF  +V   + 
Sbjct: 389 AYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNV--FVG 446

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSL 313
            SL++ Y KCG L +A ++F  +  + V+ WSS+I  Y       EA+E+F Q+ +  ++
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV 506

Query: 314 QVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           + +     S++   +   LVE+G     + +H Y  +     D+     +VD+  + G +
Sbjct: 507 RPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRP----DSEHFGIMVDLLGRIGQL 562

Query: 369 DEATELFNEMPV 380
            +A ++ N MP+
Sbjct: 563 GKAMDIINRMPI 574



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 174/350 (49%), Gaps = 3/350 (0%)

Query: 33   QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            + H  +   G  +D  +      MY     ++ A  VF+ +       W  ++ GF  +G
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 93   NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               + L L+ +M    +KP++F     +K+   LS ++ G  IH   +  G   +  V  
Sbjct: 798  RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857

Query: 153  SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +++DMY+KCG I  A  +FD M  + L++W +MI+GY   GY+ + L  F  M+  G IP
Sbjct: 858  ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917

Query: 213  DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            +  +  S L ACG+LG++  G   H ++I +GF + +  ++A +++D Y KCG L  AR 
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDI--LVATAIMDMYSKCGSLDLARC 975

Query: 273  VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            +FD    K ++ WS++I  Y    +  +A++LF Q+ +  ++      + ++   +   L
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 333  VEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
            +E+GK        +       S    +VD+  + G + EA +L   MPV+
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 1085



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 150/276 (54%), Gaps = 8/276 (2%)

Query: 18   SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
            +L+ C+    L  G  +H  LV  G S DL ++  L+DMYAKCG++  A  VFDKM  R+
Sbjct: 824  ALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRD 883

Query: 78   VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            +VSWT+++ G+  NG     L  F  M SS V PN  ++ + + A G L ++  G   H 
Sbjct: 884  LVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943

Query: 138  MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              +++GFE++ +V  +I+DMYSKCG ++ A  +FD    K L+ W+AMIA Y + G+  K
Sbjct: 944  YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003

Query: 198  GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
             + LF +M + G  P   TFT  L AC   G +  G +++  L+T  F  + K      +
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACM 1062

Query: 258  VDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLI 289
            VD   + G L EA    DLIE   V      W SL+
Sbjct: 1063 VDLLGRAGQLSEA---VDLIENMPVEPDASIWGSLL 1095



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 165/342 (48%), Gaps = 23/342 (6%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
            +AC +  SV   +Q+H  +  +G  +   T  A  L   Y KC  L  AR+VFD     
Sbjct: 11  FQACNNGRSV---SQLHSQVFKTGILHD--TFFATKLNSLYAKCASLQAARKVFDETPHP 65

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFVLSSMMGVFADFALVEQGKQI 339
           +V  W+S +  Y +E+   E + LF  +   + +  D F +   +   A   ++E GK I
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 340 HAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           H +A K    G D  V +++V++Y KCG + EA ++F E    + V WT ++TGY ++  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185

Query: 399 AKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            +EA+ LF +M ++D V  D V  ++V+SAC+   L  ++      L   +     +   
Sbjct: 186 PEEALALFSQMVMMDCVVLDPVTLVSVVSACAQL-LNVKAGSCVHGLVIRREFDGDLPLV 244

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD-----LELGREVGEIL 512
           + +++   + G    A NL   MP K  I+ W T++ AC  + +     L L  E+ E  
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEKDVIS-WSTMI-ACYANNEAANEALNLFHEMIEKR 302

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWN--ECERLRKLARSKGLK 552
                  P +  ++S + A A S N  E +++ K+A  KG +
Sbjct: 303 FE-----PNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE 339



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 3/175 (1%)

Query: 5    SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
            S  ++  R  +   L  C     L  G   H  +++ GF FD+++   ++DMY+KCG ++
Sbjct: 912  SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971

Query: 65   GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
             A  +FD+   +++V W+A++  +  +G+ +  + LF QM  + V+P+  T +  + A  
Sbjct: 972  LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 1031

Query: 125  VLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK 177
                +E G +++   M   F     + N   ++D+  + G+++EA  + + MP +
Sbjct: 1032 HSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 1085



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 10/162 (6%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           K+ HA         D+ +      MY+    ID A+ +F ++P      W V+I G+   
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----CNDKRMKP 452
           G    ++ L+ KM+   ++PD  A+   L +C+    ++  +     L    C++     
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
                + +VD   + G ++ A+ + + M V+  ++ W +++S
Sbjct: 857 -----AALVDMYAKCGDIEAARLVFDKMAVRDLVS-WTSMIS 892


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/626 (36%), Positives = 368/626 (58%), Gaps = 34/626 (5%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           L ++ +M +  +  + F+    +KA   + S+  G++IHG+  K GF+ +P V   ++ M
Sbjct: 107 LLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRM 166

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y+ CGRI EA  MFD M  + ++TW+ MI GY  +G  +  LLLF +M+ +   PDE   
Sbjct: 167 YAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMML 226

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGF---PY-------------------------SV 249
           ++ L ACG  G++  G  IH F++ +     P+                         + 
Sbjct: 227 STVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTP 286

Query: 250 KTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           K ++A + +V  Y K G +  AR VF+ + +K ++ WS++I GYA+ ++  EA+ LF ++
Sbjct: 287 KNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEM 346

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           +   ++ D   + S++   A    ++Q K IH +  K   G    ++N++++MY KCG +
Sbjct: 347 QSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSL 406

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A  +F++MP KNV++WT +I+ +  HG A  A+  F +M  +++EP+G+ ++ VL AC
Sbjct: 407 ERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYAC 466

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH+GLVEE ++ F  + N+  + P+  HY C+VD  GRA  L EA  L+E+MP+ P++ I
Sbjct: 467 SHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVII 526

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W +L++ACRVHG++ELG    + LL LD D+   +V +SNI+A A  W +  ++RKL + 
Sbjct: 527 WGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKH 586

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           KG+ K  G S  E++ EIH F   D +H   ++I++ L E+  ++K  +G+       L 
Sbjct: 587 KGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLK-LVGYSPNTCSILV 645

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D++EE K+E +  HSEKLA+   L+R G     G  IR+ KNLRVC DCH FIK  SK+ 
Sbjct: 646 DLEEEEKKEVVLWHSEKLALCYGLMRDG----TGSCIRIIKNLRVCEDCHTFIKLASKVY 701

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           +   VVRD TRFH ++ GVCSC DYW
Sbjct: 702 EREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 221/443 (49%), Gaps = 37/443 (8%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L  +R      L+  S+   L  G+++HG   K+GF  D  +   L+ MYA CG +  A 
Sbjct: 118 LAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEAR 177

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FDKM  R+VV+W+ ++ G+ Q+G     L LF +M + +V+P+E  LST + A G   
Sbjct: 178 LMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAG 237

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------- 161
           ++  G  IH   M++    +P + ++++ MY+ C                          
Sbjct: 238 NLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVT 297

Query: 162 -----GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFT 216
                G+I  A  +F+ M  K L+ W+AMI+GY  +    + L LF +MQ  G  PD+ T
Sbjct: 298 GYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVT 357

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
             S + AC  LG++     IH F+  +GF  ++   I  +L++ Y KCG L  ARR+FD 
Sbjct: 358 MLSVITACAHLGALDQAKWIHLFVDKNGFGGALP--INNALIEMYAKCGSLERARRIFDK 415

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           + +K+VISW+ +I  +A   +   A+  F Q+ + +++ +G     ++   +   LVE+G
Sbjct: 416 MPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEG 475

Query: 337 KQIHAYAAKVPSGLDTSVS-NSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYG 394
           ++I        +     V    +VD++ +  L+ EA EL   MP+  NV+ W  ++    
Sbjct: 476 RKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACR 535

Query: 395 KHGLAKEAVGLFRKMLLDDVEPD 417
            HG  +  +G F    L +++PD
Sbjct: 536 VHG--EIELGEFAAKRLLELDPD 556



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 193/407 (47%), Gaps = 36/407 (8%)

Query: 127 SSVENGMQIHGMCMKSGFEWNP-VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           +S+ +  Q+H   ++S  + +  ++   +I   +    ++ A  +F+++P       N  
Sbjct: 34  TSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRF 93

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +     +   +K LL++ +M+  G   D F+F   LKA   + S+  G +IHG     GF
Sbjct: 94  LRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGF 153

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
                  +   LV  Y  CG + EAR +FD +  + V++WS +I GY Q     +A+ LF
Sbjct: 154 --DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLF 211

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            +++  +++ D  +LS+++        +  GK IH +  +    +D  + +++V MY  C
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD------------ 413
           G +D A  LF +M  KN+V  T ++TGY K G  + A  +F +M+  D            
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331

Query: 414 -------------------VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
                              ++PD V  L+V++AC+H G +++++ +     +       +
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAK-WIHLFVDKNGFGGAL 390

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
              + +++   + G L+ A+ + + MP K  I+ W  ++SA  +HGD
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRKNVIS-WTCMISAFAMHGD 436



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 160/342 (46%), Gaps = 19/342 (5%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS----VKTVIAGSLVDFYVKCGCLVEAR 271
           T  S L +  SL  +    Q+H  ++ S    S    VK VI+   +        L  A 
Sbjct: 25  TLFSALSSATSLTHL---KQVHAQILRSKLDRSTSLLVKLVISSCALS-----SSLDYAL 76

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VF+LI +      +  +   ++ E   + + ++ ++R + L VD F    ++   +   
Sbjct: 77  SVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVK 136

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            + +G +IH  AAK+    D  V   +V MY  CG I EA  +F++M  ++VVTW+++I 
Sbjct: 137 SLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMID 196

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC-NDKRM 450
           GY + GL  +A+ LF +M   +VEPD +    VLSAC  +G +   +     +  N+  +
Sbjct: 197 GYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVV 256

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P ++  S +V      G +D A NL E M  K  +A    +    ++ G +E  R V  
Sbjct: 257 DPHLQ--SALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL-GQIENARSVFN 313

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
            +++ D    V +  M + +A++ S  E   L    +S G+K
Sbjct: 314 QMVKKD---LVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/667 (35%), Positives = 368/667 (55%), Gaps = 11/667 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  LH  L+     FD++L+N+LI  YAKCG +  A  VFD M  RN VS   LM G
Sbjct: 27  LSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  +G  K  L L   +       NE+ LS  + A+  + S + G Q HG  +K+GF   
Sbjct: 86  YASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V N+++ MY +C  + +A+++F+ +       +N+MI GY+  G  D  L + R M  
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTG 202

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
             E  D  ++ + L  C S+     G Q+H   +      +V   +  +LVD Y KC  +
Sbjct: 203 EAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNV--YVGSALVDMYGKCDHV 260

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +A R F+++ +K+V+SW++++  Y Q E   +A++LF  +    +Q + F  +  +   
Sbjct: 261 HDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC 320

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A  A +  G  + A   K        VSN++++MY K G I++A  +F  MP+++VV+W 
Sbjct: 321 AGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWN 380

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
           +IITGY  HGLA+E +  F  ML   V P  V ++ VLSAC+  GLV+E+  Y + +  +
Sbjct: 381 LIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKE 440

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P  EHY+C+V  L R GRLDEA+  I +  +   +  W++LL++C+V+ +  LG  
Sbjct: 441 VGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHR 500

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
           V E +L+L+  +   YV++SN++A A  W+   ++RK  R + ++K  G SW+ V  ++H
Sbjct: 501 VAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVH 560

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   +  HP  ++I + L E+  ++K  +G+V      LHDI +E KEE L  HSEKLA
Sbjct: 561 VFTSEEKVHPQMDQIAKKLEELIDQIK-AIGYVPNFAVVLHDIDDERKEEHLMYHSEKLA 619

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +   L+    +   G  I + KNLR+C DCH  IK +S +     VVRDA RFH  EGG+
Sbjct: 620 LAFGLI----HTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGI 675

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 676 CSCNDYW 682



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A +L  C+    L  G  L   ++K G    L+++N L++MY+K G +  A  VF  M  
Sbjct: 314 AVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL 373

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW  ++ G+  +G A+  +  F  M S++V P+  T    + A   L  V+     
Sbjct: 374 RDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYY 433

Query: 136 HGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMF-------DVMPAKSLIT 181
               MK  G          ++ +  + GR++EA R         DV+  +SL+ 
Sbjct: 434 LNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLN 487


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/563 (38%), Positives = 334/563 (59%), Gaps = 8/563 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+H   + + +     +G  ++ MY +CG +++A  + D MP +S+++W  MI+GY  
Sbjct: 61  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                + L LF KM   G IP+E+T  + L +C    S+  G Q+H  L+ + F   +  
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM-- 178

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+D Y K   + EARRVFD + ++ V+S +++I GYAQ+    EA++LFRQL   
Sbjct: 179 FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 238

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +Q +    ++++   +  A ++ GKQ+HA   +       ++ NS++DMY KCG +  +
Sbjct: 239 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 298

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ M  ++VV+W  ++ GYG+HGL  E + LF K L  +V+PD V  LAVLS CSH 
Sbjct: 299 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSGCSHG 357

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E  + F  +  ++       HY CI+D LGR+GRL++A NLIE+MP + + +IW +
Sbjct: 358 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 417

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL ACRVH ++ +G  V + LL ++ +N  NYV++SNI+A AG W +  ++RKL   K +
Sbjct: 418 LLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 477

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
            K  G+SW+ +DK IH F+  +  HP  + I+  + E+   +K   GFV  +   LHD+ 
Sbjct: 478 TKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAA-GFVPDLSCVLHDVD 536

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E KE  L  HSEKLAI   L    +N  PG  IRV KNLR+C DCH F K +SK+ +  
Sbjct: 537 DEQKERMLLGHSEKLAITFGL----MNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYERE 592

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
             +RD  RFH    G C+CGDYW
Sbjct: 593 ISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 219/411 (53%), Gaps = 7/411 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           ++  C +   L  G Q+H  ++   +   + L   L+ MY +CG ++ A  V D+M ER+
Sbjct: 48  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWT ++ G+ Q       L LF +M  +   PNE+TL+T + +     S+  G Q+H 
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 167

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K+ FE +  VG+S++DMY+K   I EA R+FD +P + +++  A+I+GY   G  ++
Sbjct: 168 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 227

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR++   G   +  TFT+ + A   L S+  G Q+H  ++    P+ V   +  SL
Sbjct: 228 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFV--ALQNSL 285

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L+ +RRVFD + ++SV+SW+++++GY +     E + LF+ L  + ++ D 
Sbjct: 286 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDS 344

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELFN 376
             L +++   +   LV++G  I     K  S  L T     I+D+  + G +++A  L  
Sbjct: 345 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 404

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MP ++  + W  ++     H  A   VG      L ++EP+      +LS
Sbjct: 405 NMPFESTPSIWGSLLGACRVH--ANVHVGELVAQKLLEMEPENAGNYVILS 453



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 147/277 (53%), Gaps = 5/277 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  CS    +  G Q+H  LVK  F   + + + L+DMYAK   +  A  VFD + 
Sbjct: 146 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LF Q+ S  ++ N  T +T + A   L+S++ G Q
Sbjct: 206 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + ++    +   + NS+IDMYSKCG++  + R+FD M  +S+++WNAM+ GY   G 
Sbjct: 266 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 325

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + + LF+ +  H E+ PD  T  + L  C   G V  G  I   ++       + T  
Sbjct: 326 GHEVISLFKDL--HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSAL-LHTGH 382

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
            G ++D   + G L +A  + + +  +S  S W SL+
Sbjct: 383 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 419


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/664 (33%), Positives = 371/664 (55%), Gaps = 8/664 (1%)

Query: 28   LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
            L +G  +HG +VK+G   ++ + N L+ +Y++ G    A  VF  M ER+++SW ++M  
Sbjct: 414  LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473

Query: 88   FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            ++Q+G     L +  ++       N  T ++ + A      +     +H + + +GF   
Sbjct: 474  YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533

Query: 148  PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +VGN+++ MY K G + EA ++   MP    +TWNA+I G+      ++ +  ++ ++E
Sbjct: 534  LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593

Query: 208  HGEIPDEFTFTSTLKACGSLGSV-GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G   +  T  S L AC +   +   G  IH  ++ +GF       +  SL+  Y KCG 
Sbjct: 594  KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGF--ESDDYVKNSLITMYAKCGD 651

Query: 267  LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            L  +  +FD +  KS I+W++++   A      EA+++F ++R   + +D F  S  +  
Sbjct: 652  LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 711

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A+ A++E+G+Q+H    K+    D  V+N+ +DMY KCG + +  ++  +   ++ ++W
Sbjct: 712  TANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSW 771

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             ++I+ + +HG  ++A   F +ML    +PD V ++++LSAC+H GLV+E   Y+  +  
Sbjct: 772  NILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR 831

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            +  + P IEH  CI+D LGR+GRL  A+  I+ MPV P+   W++LL+ACR+HG+LEL R
Sbjct: 832  EFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELAR 891

Query: 507  EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
            +  E LL LD  +   YV+ SN+ A +G W + E LRK   S  +KK    SWV++  ++
Sbjct: 892  KTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKV 951

Query: 567  HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
            H F  G+  HP   +I   L E+ K M +E G+V    +ALHD+ EE KE +L  HSE+L
Sbjct: 952  HSFGMGEKYHPQASRISAKLGELMK-MTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERL 1010

Query: 627  AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
            A+   L+    N      +R+FKNLRVCGDCH   K +S I+    V+RD  RFH F GG
Sbjct: 1011 ALAFGLI----NTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGG 1066

Query: 687  VCSC 690
             CSC
Sbjct: 1067 KCSC 1070



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 260/506 (51%), Gaps = 19/506 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH   +    +  +   N LI+MY+K G +  A  VFD+M  RN  SW+ ++ G+++
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCMKSGFEWN 147
            G  +  + LFCQM    V+PN F +++ I A   SG ++  + G Q+HG  +K+G   +
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA--DEGFQVHGFVVKTGILGD 230

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG +++  Y   G +  A ++F+ MP  ++++W +++ GY  +G   + L ++++M++
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G   ++ TF +   +CG L     G Q+ G +I  GF  SV   +A SL+  +     +
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS--VANSLISMFSSFSSV 348

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA  VFD + +  +ISW+++I  YA      E++  F  +R    + +   LSS++ V 
Sbjct: 349 EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 408

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           +    ++ G+ IH    K+  GLD++V   N+++ +Y + G  ++A  +F  M  +++++
Sbjct: 409 SSVDNLKWGRGIHGLVVKL--GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 466

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  ++  Y + G   + + +  ++L      + V + + L+ACS+   + ES+   + + 
Sbjct: 467 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 526

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
                   I   + +V   G+ G + EAK ++++MP +P    W  L+     H + E  
Sbjct: 527 VAGFHDFLIVG-NALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG---HAENEEP 581

Query: 506 REVGEI--LLRLDGDNPVNYVMMSNI 529
            E  +   L+R  G  P NY+ M ++
Sbjct: 582 NEAVKAYKLIREKGI-PANYITMVSV 606



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 264/560 (47%), Gaps = 39/560 (6%)

Query: 15  LADSLRCCSKN-LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           +A  +  CS++  + D G Q+HG +VK G   D+ +   L+  Y   G +  A  +F++M
Sbjct: 198 VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 257

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
            + NVVSWT+LM G+  +GN    L+++ +M    V  N+ T +T   + G+L     G 
Sbjct: 258 PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGY 317

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+ G  ++ GFE +  V NS+I M+S    + EA  +FD M    +I+WNAMI+ Y   G
Sbjct: 318 QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 377

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L  F  M+      +  T +S L  C S+ ++  G  IHG ++  G   +V   I
Sbjct: 378 LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNV--CI 435

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+  Y + G   +A  VF  + ++ +ISW+S++  Y Q+    + +++  +L +   
Sbjct: 436 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            ++    +S +   ++   + + K +HA            V N++V MY K G++ EA +
Sbjct: 496 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 555

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   MP  + VTW  +I G+ ++    EAV  ++ +    +  + +  ++VL ACS    
Sbjct: 556 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDD 615

Query: 430 --HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
               G+   +    +   +D  +K      + ++    + G L+ +  + + +  K  I 
Sbjct: 616 LLKHGMPIHAHIVLTGFESDDYVK------NSLITMYAKCGDLNSSNYIFDGLGNKSPIT 669

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W  +++A   HG        GE  L++ G+       M N+  +         L + + 
Sbjct: 670 -WNAMVAANAHHG-------CGEEALKIFGE-------MRNVGVN---------LDQFSF 705

Query: 548 SKGLKKVAGRSWVEVDKEIH 567
           S GL   A  + +E  +++H
Sbjct: 706 SGGLAATANLAVLEEGQQLH 725



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 153/294 (52%), Gaps = 9/294 (3%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +K    ++S   G  +H  C+           N++I+MYSK G I  A  +FD M  ++ 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG-GTQIHG 238
            +W+ M++GYV  G  ++ + LF +M   G  P+ F   S + AC   G +   G Q+HG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           F++ +G    V   +  +LV FY   G +  A+++F+ +   +V+SW+SL++GY+   N 
Sbjct: 221 FVVKTGILGDV--YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 278

Query: 299 AEAMELFRQLRERSL---QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            E + +++++R+  +   Q     ++S  G+  D  L   G Q+  +  +       SV+
Sbjct: 279 GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL---GYQVLGHIIQYGFEDSVSVA 335

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           NS++ M+     ++EA  +F+ M   ++++W  +I+ Y  HGL +E++  F  M
Sbjct: 336 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWM 389



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 1/167 (0%)

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           F++      GK +HA+       L    +N++++MY K G I+ A  +F+EM  +N  +W
Sbjct: 104 FSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 163

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           + +++GY + GL +EAVGLF +M    VEP+G    ++++ACS SG + +          
Sbjct: 164 STMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV 223

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              +   +   + +V   G  G +  A+ L E MP   ++  W +L+
Sbjct: 224 KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/673 (34%), Positives = 374/673 (55%), Gaps = 43/673 (6%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           +Y+    ++ +  +F+ +     ++W +++  +  +G     L  F  M +S + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR------ 169
             + +K+  +L  +  G  +HG  ++ G +++   GN++++MYSK   + E+ R      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 170 --------------------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
                                     +F++MP K L++WN +IAG    G  ++ L + R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M      PD FT +S L        +  G +IHG  I  G    +   +A SL+D Y K
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADI--YVASSLIDMYAK 286

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           C  + ++ RVF L+ ++  ISW+S+I G  Q     E +  FRQ+    ++   +  SS+
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVK 381
           M   A    +  GKQ+H Y  +  +G D +  +++S+VDMY KCG I  A ++F+ M ++
Sbjct: 347 MPACAHLTTLHLGKQLHGYITR--NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           ++V+WT +I G   HG A +A+ LF +M  + ++P+ VA++AVL+ACSH GLV+E+ +YF
Sbjct: 405 DMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYF 464

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           + +  D  + P +EHY+ + D LGRAGRL+EA + I  M + P+ +IW TLLSACRVH +
Sbjct: 465 NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXN 524

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           +++  +V   +L +D +N   Y++++NI++ A  W E  + R   R  G++K    SW+E
Sbjct: 525 IDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIE 584

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           V  +++ F  GD++HP  EKI +  ME+   + E+ G+V       HD++EE K+  +  
Sbjct: 585 VKNKVYAFMAGDESHPCYEKIREA-MEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCS 643

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSE+LAI    V G +N   G  IRV KNLRVC DCH   K +SKI+    VVRD +RFH
Sbjct: 644 HSERLAI----VFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFH 699

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSCGDYW
Sbjct: 700 HFKNGTCSCGDYW 712



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 226/463 (48%), Gaps = 77/463 (16%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN-------GACAVFD 71
           L+ C+  + L+ G  LHG ++++G  FDL   N L++MY+K   +        GA  VFD
Sbjct: 113 LKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFD 172

Query: 72  KMLER-------------------------NVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
           +M ER                         ++VSW  ++ G  +NG  +  L +  +MG 
Sbjct: 173 EMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGG 232

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           +++KP+ FTLS+ +        +  G +IHG  ++ G + +  V +S+IDMY+KC R+ +
Sbjct: 233 ANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVAD 292

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           + R+F ++  +  I+WN++IAG V  G  D+GL  FR+M      P  ++F+S + AC  
Sbjct: 293 SCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAH 352

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           L ++  G Q+HG++  +GF  ++   IA SLVD Y KCG +  A+++FD +  + ++SW+
Sbjct: 353 LTTLHLGKQLHGYITRNGFDENI--FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWT 410

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I+G A      +A+ELF Q+    ++ +     +++                      
Sbjct: 411 AMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVL---------------------- 448

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-----VKNVVTWTVIITGYGKHGLAKE 401
                T+ S+         GL+DEA + FN M         V  +  +    G+ G  +E
Sbjct: 449 -----TACSHG--------GLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 495

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           A      M    + P G  +  +LSAC     ++ +++  +R+
Sbjct: 496 AYDFICGM---HIGPTGSIWATLLSACRVHXNIDMAEKVANRI 535



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 124/216 (57%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   ++N+ +  G ++HG  ++ G   D+ + + LIDMYAKC  +  +C VF  + 
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+ +SW +++ G +QNG     L  F QM  + +KP  ++ S+ + A   L+++  G Q
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG   ++GF+ N  + +S++DMY+KCG I  A ++FD M  + +++W AMI G  L G 
Sbjct: 362 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           +   + LF +M+  G  P+   F + L AC   G V
Sbjct: 422 APDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLV 457


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 339/589 (57%), Gaps = 8/589 (1%)

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           S+ + P     ++ +++     +++ G Q+H     +GF ++ V+   ++++Y  C  ++
Sbjct: 68  STCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +FD +P  ++  WN +I GY   G  +  + L+ +M ++G +PD FTF   LKAC 
Sbjct: 128 SARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACA 187

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L ++  G +IH  ++ +G+   V   +  +L+D Y KCGC+  AR VFD I  +  + W
Sbjct: 188 ALSAIEHGREIHEHVVQTGWEKDV--FVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +S++  Y+Q  +    + L  ++    L+     L + +   AD A + QG+++H  + +
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                   V  ++VDMY KCG +  A  LF  + VK VV+W  +ITGY  HG A EA+ L
Sbjct: 306 QEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDL 365

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F +M     +PD + ++ VLSACSH GL+EE   +F  +  D ++ P ++HY+C+VD LG
Sbjct: 366 FEEMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLG 424

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
            +GRLDEA NLI  M V P   +W  LL++C++H ++ELG    E L+ L+ D+  NYV+
Sbjct: 425 HSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVI 484

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SNI+A AG W    +LRKL   + LKK    SW+EV  ++H F  GD +HPL+++I+  
Sbjct: 485 LSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSE 544

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L  +   MKE  G+        HD++++ K   +  HSE+LAI   L+    +  PG  +
Sbjct: 545 LERVGGLMKEA-GYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLI----STPPGTRL 599

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + KNLR+C DCH  IK +SKI +    VRD  R+H F+ GVCSCGDYW
Sbjct: 600 LITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 217/453 (47%), Gaps = 9/453 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  L       A  L+ C     +  G QLH  +   GF FD ++   L+++Y  C  ++
Sbjct: 68  STCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +FD++ + N+  W  L+ G+  NG  +A + L+ QM    + P+ FT    +KA  
Sbjct: 128 SARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACA 187

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            LS++E+G +IH   +++G+E +  VG ++IDMY+KCG +  A  +FD +  +  + WN+
Sbjct: 188 ALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNS 247

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           M+A Y   G+ D  L L  +M   G  P E T  + + A     ++  G ++HG      
Sbjct: 248 MLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQE 307

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F    K  +  +LVD Y KCG +  AR +F+ +  K V+SW+++I GYA   +  EA++L
Sbjct: 308 FESHDK--VKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDL 365

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F ++  R  + D      ++   +   L+E+G        +    +D +V +   +VD+ 
Sbjct: 366 FEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVDLL 423

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
              G +DEA  L  +M V  +   W  ++     H  A   +G      L ++EPD    
Sbjct: 424 GHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIH--ANVELGEIALERLIELEPDDAGN 481

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
             +LS         E      +L  D+R+K  I
Sbjct: 482 YVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSI 514


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/670 (35%), Positives = 368/670 (54%), Gaps = 12/670 (1%)

Query: 30  YGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS---WTALM 85
           Y  QLH AL+K G  +      + L++  A    +        ++  R  +S   +  LM
Sbjct: 31  YLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLM 90

Query: 86  CGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
              L  G+ +  L LF +M   +SV P++ T++  +K+   + +++ G  I    +K G 
Sbjct: 91  RALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGL 150

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
             +  V +S+I MY+ C  +  A  +FD +    ++ WNA+I  Y+  G   + + +F+ 
Sbjct: 151 MADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKG 210

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M E G   DE T  S + ACG +G    G  +  ++   G   +   + A  L+D Y KC
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTA--LIDMYAKC 268

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L +ARR+FD ++ + V++WS++I GY Q +   EA+ LF +++   ++ +   + S++
Sbjct: 269 GELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVL 328

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              A    +E GK +H+Y  +    L   +  ++VD Y KCG ID+A E F  MPVKN  
Sbjct: 329 SACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSW 388

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           TWT +I G   +G  +EA+ LF  M    +EP  V ++ VL ACSHS LVEE + +F  +
Sbjct: 389 TWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSM 448

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             D  +KPR EHY C+VD LGRAG +DEA   I +MP++P+  IW+ LLS+C VH ++E+
Sbjct: 449 TQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEI 508

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G E  + ++ L+  +  +Y+++SNI+A  G W     +RK  + +G++K  G S +E+D 
Sbjct: 509 GEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDG 568

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            +  F+  D  HP  ++I+Q + EM  R+K   G++        ++ E  KE S+  HSE
Sbjct: 569 VVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMA-GYIPNTADVRLEVDEHEKEVSVSHHSE 627

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLAI   L++      PG  IR+ KNLRVC DCH   K +SK+     VVRD  RFH F+
Sbjct: 628 KLAIAFGLMK----LDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFK 683

Query: 685 GGVCSCGDYW 694
            G CSC DYW
Sbjct: 684 DGTCSCNDYW 693



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 204/393 (51%), Gaps = 6/393 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  ++  +A +L+ CS+   LD G  +    VK G   D  + + LI MYA C ++  A
Sbjct: 114 SVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAA 173

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD + E  VV W A++  +++NGN    + +F  M    V  +E TL + + A G +
Sbjct: 174 QLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRI 233

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
              + G  +     + G   N  +  ++IDMY+KCG + +A R+FD M ++ ++ W+AMI
Sbjct: 234 GDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMI 293

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY  A    + L LF +MQ     P++ T  S L AC  LG++  G  +H ++      
Sbjct: 294 SGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRL- 352

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+  ++  +LVDFY KCGC+ +A   F+ +  K+  +W++LI G A      EA+ELF 
Sbjct: 353 -SLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFS 411

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
            +R+ S++        ++   +   LVE+G++ H  +     G+     +   +VD+  +
Sbjct: 412 SMRKASIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMTQDYGIKPRAEHYGCVVDLLGR 470

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            GLIDEA +    MP++ N V W  +++    H
Sbjct: 471 AGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/563 (38%), Positives = 334/563 (59%), Gaps = 8/563 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+H   + + +     +G  ++ MY +CG +++A  + D MP +S+++W  MI+GY  
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                + L LF KM   G IP+E+T  + L +C    S+  G Q+H  L+ + F   +  
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM-- 146

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+D Y K   + EARRVFD + ++ V+S +++I GYAQ+    EA++LFRQL   
Sbjct: 147 FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 206

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +Q +    ++++   +  A ++ GKQ+HA   +       ++ NS++DMY KCG +  +
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 266

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ M  ++VV+W  ++ GYG+HGL  E + LF+  L  +V+PD V  LAVLS CSH 
Sbjct: 267 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHG 325

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E  + F  +  ++       HY CI+D LGR+GRL++A NLIE+MP + + +IW +
Sbjct: 326 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGS 385

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL ACRVH ++ +G  V + LL ++ +N  NYV++SNI+A AG W +  ++RKL   K +
Sbjct: 386 LLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTV 445

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
            K  G+SW+ +DK IH F+  +  HP  + I+  + E+   +K   GFV  +   LHD+ 
Sbjct: 446 TKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAA-GFVPDLSCVLHDVD 504

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E KE  L  HSEKLAI   L    +N  PG  IRV KNLR+C DCH F K +SK+ +  
Sbjct: 505 DEQKERMLLGHSEKLAITFGL----MNTPPGLTIRVMKNLRICVDCHNFAKFVSKVYERE 560

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
             +RD  RFH    G C+CGDYW
Sbjct: 561 ISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 219/411 (53%), Gaps = 7/411 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           ++  C +   L  G Q+H  ++   +   + L   L+ MY +CG ++ A  V D+M ER+
Sbjct: 16  AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWT ++ G+ Q       L LF +M  +   PNE+TL+T + +     S+  G Q+H 
Sbjct: 76  VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K+ FE +  VG+S++DMY+K   I EA R+FD +P + +++  A+I+GY   G  ++
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR++   G   +  TFT+ + A   L S+  G Q+H  ++    P+ V   +  SL
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFV--ALQNSL 253

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L+ +RRVFD + ++SV+SW+++++GY +     E + LF+ L  + ++ D 
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDS 312

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELFN 376
             L +++   +   LV++G  I     K  S  L T     I+D+  + G +++A  L  
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIE 372

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MP ++  + W  ++     H  A   VG      L ++EP+      +LS
Sbjct: 373 NMPFESTPSIWGSLLGACRVH--ANVHVGELVAQKLLEMEPENAGNYVILS 421



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 147/277 (53%), Gaps = 5/277 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  CS    +  G Q+H  LVK  F   + + + L+DMYAK   +  A  VFD + 
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLP 173

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LF Q+ S  ++ N  T +T + A   L+S++ G Q
Sbjct: 174 ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQ 233

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + ++    +   + NS+IDMYSKCG++  + R+FD M  +S+++WNAM+ GY   G 
Sbjct: 234 VHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGL 293

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + + LF+ +  H E+ PD  T  + L  C   G V  G  I   ++       + T  
Sbjct: 294 GHEVISLFKDL--HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSAL-LHTGH 350

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
            G ++D   + G L +A  + + +  +S  S W SL+
Sbjct: 351 YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 383/698 (54%), Gaps = 43/698 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  +++ G  FD    + LI   A      ++ A  VFD++   N+ +W  L+  +  
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 91  NGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + N    L +F +M   S   P++FT    IKA+  L  +  G   HGM +K     +  
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + NS+I  Y+KCG +    R+F  +P + +++WN+MI  +V  G  ++ L LF++M+   
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+  T    L AC        G  +H ++  +    S+   ++ +++D Y KCG + +
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL--TLSNAMLDMYTKCGSVED 290

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQ---------------EENLA--------------- 299
           A+R+FD + +K ++SW+++++GYA+                +++A               
Sbjct: 291 AKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKP 350

Query: 300 -EAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
            EA+ELF +L+  ++ + D   L S +   A    ++ G  IH Y  K    L+  ++ S
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS 410

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG + +A  +F+ +  K+V  W+ +I G   HG  K+A+ LF KM  D V+P+
Sbjct: 411 LIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            V +  +L ACSH GLVEE + +F+++     + P ++HY+C+VD LGRAG L+EA  LI
Sbjct: 471 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 530

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           E MP+ P+ ++W  LL AC +H ++ L  +    L+ L+  N   YV++SNI+A AG W+
Sbjct: 531 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWD 590

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
               LRKL R  GLKK  G S +EVD  +H F  GD++HP  +KI+  L E+  R+ E +
Sbjct: 591 RVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARL-ETI 649

Query: 598 GFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           G+V    + L  ++EE  KE++L +HSEKLAI   L+  G   QP   IR+ KNLRVCGD
Sbjct: 650 GYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTG-QSQP---IRIVKNLRVCGD 705

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH   K +SK+     ++RD  RFH F  G CSC DYW
Sbjct: 706 CHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 195/395 (49%), Gaps = 38/395 (9%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G   HG ++K+    D+ + N LI  YAKCGE+     VF  +  R+VVSW +++  F+Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G  +  L LF +M + +VKPN  T+   + A    S  E G  +H    ++    +  +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD-------------- 196
            N+++DMY+KCG + +A R+FD MP K +++W  M+ GY   G  D              
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334

Query: 197 -----------------KGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
                            + L LF ++Q      PDE T  STL AC  LG++  G  IH 
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           ++   G    +   +  SL+D Y KCG L +A  VF  +E+K V  WS++I G A   + 
Sbjct: 395 YIKKQGM--KLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN-- 356
            +A+ LF +++E  ++ +    ++++   +   LVE+G+        V  G+   V +  
Sbjct: 453 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV-YGVLPGVKHYA 511

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVII 390
            +VD+  + GL++EA EL  +MP+    + W  ++
Sbjct: 512 CMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 36/326 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K    ++G  +H  + +      L L+N ++DMY KCG +  A  +FDKM E+++
Sbjct: 244 LSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303

Query: 79  VSWTALMCGFL-------------------------------QNGNAKACLSLFCQMG-S 106
           VSWT ++ G+                                Q G  K  L LF ++  S
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLS 363

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            + KP+E TL + + A   L +++ G  IH    K G + N  +  S+IDMY KCG + +
Sbjct: 364 KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQK 423

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  +  K +  W+AMIAG  + G+    + LF KMQE    P+  TFT+ L AC  
Sbjct: 424 ALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSH 483

Query: 227 LGSVGGG-TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS- 284
           +G V  G T  +   +  G    VK      +VD   + G L EA  + + +      S 
Sbjct: 484 VGLVEEGRTFFNQMELVYGVLPGVKHY--ACMVDILGRAGLLEEAVELIEKMPMAPAASV 541

Query: 285 WSSLILGYAQEENLAEAMELFRQLRE 310
           W +L+      EN+  A +   QL E
Sbjct: 542 WGALLGACTIHENVVLAEQACSQLIE 567



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C++   +D G  +H  + K G   +  L   LIDMY KCG++  A  VF  + 
Sbjct: 373 LVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVE 432

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++V  W+A++ G   +G+ K  ++LF +M    VKPN  T +  + A   +  VE G  
Sbjct: 433 RKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRT 492

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
                M+  +   P V +   ++D+  + G + EA  + + MP A +   W A++  
Sbjct: 493 FFNQ-MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 548


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/648 (35%), Positives = 364/648 (56%), Gaps = 35/648 (5%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+  SW   +    ++ + +  +S + +M  S  +P+ F     +KA   L  ++ G QI
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 136 HGMCMKSGFEWNPV-VGNSIIDMYSKCG--------------------RINEAARMFDVM 174
           H   +K G+  + V V N++++MY KCG                    R++++  +F+  
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
             + +++WN MI+ +  +    + L  FR M   G   D  T  S L AC  L  +  G 
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           +IH +++ +       + +  +LVD Y  C  +   RRVFD I  + +  W+++I GYA+
Sbjct: 235 EIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 295 EENLAEAMELF-RQLRERSLQVDGFVLSSMM-GVFADFALVEQGKQIHAYAAKVPSGLDT 352
                +A+ LF   ++   L  +   ++S+M       A + +GK+IHAYA +     D 
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDI 353

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
           +V +++VDMY KCG ++ +  +FNEMP KNV+TW V+I   G HG  +EA+ LF+ M+ +
Sbjct: 354 TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 413

Query: 413 -----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
                + +P+ V ++ V +ACSHSGL+ E    F R+ +D  ++P  +HY+C+VD LGRA
Sbjct: 414 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 468 GRLDEAKNLIESMPVK-PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           G+L+EA  L+ +MP +   +  W +LL ACR+H ++ELG    + LL L+ +   +YV++
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLL 533

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SNI++ AG WN+   +RK  R  G+KK  G SW+E   E+H F  GD +HP +E++H  L
Sbjct: 534 SNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFL 593

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
             + ++M++E G+V      LH++ E+ KE  L  HSEKLAI      G LN  PG  IR
Sbjct: 594 ETLSEKMRKE-GYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAF----GILNTPPGTTIR 648

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V KNLRVC DCH   K +SKI++   +VRD  RFH F+ G CSCGDYW
Sbjct: 649 VAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 217/446 (48%), Gaps = 39/446 (8%)

Query: 28  LDYGVQLHGALVKMGFSFD---------------------LMLNNDLIDMYAKCGEMNGA 66
           L  G Q+H A VK G+                           NN L+ MYAK G ++ +
Sbjct: 108 LKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDS 167

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            A+F+  ++R++VSW  ++  F Q+      L+ F  M    V+ +  T+++ + A   L
Sbjct: 168 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 227

Query: 127 SSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             ++ G +IH   +++     N  VG++++DMY  C ++    R+FD +  + +  WNAM
Sbjct: 228 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAM 287

Query: 186 IAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITS 243
           I+GY   G  +K L+LF +M +  G +P+  T  S + AC  SL ++  G +IH + I +
Sbjct: 288 ISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRN 347

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
                +   +  +LVD Y KCGCL  +RRVF+ +  K+VI+W+ LI+         EA+E
Sbjct: 348 MLASDI--TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALE 405

Query: 304 LFRQL-----RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN-- 356
           LF+ +     R    + +     ++    +   L+ +G  +  Y  K   G++ +  +  
Sbjct: 406 LFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF-YRMKHDHGVEPTSDHYA 464

Query: 357 SIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            +VD+  + G ++EA EL N MP +   V  W+ ++     H   +  +G      L  +
Sbjct: 465 CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE--LGEVAAKNLLHL 522

Query: 415 EPDGVAYLAVLSAC-SHSGLVEESQE 439
           EP+  ++  +LS   S +GL  ++ E
Sbjct: 523 EPNVASHYVLLSNIYSSAGLWNKAME 548



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 176/357 (49%), Gaps = 26/357 (7%)

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P++S  +W   +     +    + +  + +M   G  PD F F + LKA   L  +  G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL--------------------VEARRVF 274
           QIH   +  G+  S  TV A +LV+ Y KCG +                     +++ +F
Sbjct: 113 QIHAAAVKFGYGSSSVTV-ANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           +    + ++SW+++I  ++Q +  +EA+  FR +    +++DG  ++S++   +    ++
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 335 QGKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
            GK+IHAY  +    ++ S V +++VDMY  C  ++    +F+ +  + +  W  +I+GY
Sbjct: 232 VGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 291

Query: 394 GKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS-GLVEESQEYFSRLCNDKRMK 451
            ++GL ++A+ LF +M+ +  + P+     +V+ AC HS   + + +E  +    +  + 
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LA 350

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
             I   S +VD   + G L+ ++ +   MP K ++  W  L+ AC +HG  E   E+
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKGEEALEL 406



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 7/177 (3%)

Query: 8   LVSERQRLADSLRCCSKNLL-LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           L+     +A  +  C  +L  +  G ++H   ++   + D+ + + L+DMYAKCG +N +
Sbjct: 313 LLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLS 372

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-----VKPNEFTLSTNIK 121
             VF++M  +NV++W  L+     +G  +  L LF  M + +      KPNE T  T   
Sbjct: 373 RRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFA 432

Query: 122 ASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           A      +  G+ + + M    G E        ++D+  + G++ EA  + + MPA+
Sbjct: 433 ACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAE 489


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/564 (37%), Positives = 338/564 (59%), Gaps = 7/564 (1%)

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G   H   +  G + + +  N +I+MYSKCG ++ A ++FD MP++SL++WN MI    
Sbjct: 82  QGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G  ++ L L  +MQ  G    EFT +S L AC +  ++     +H F I +    +V 
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNV- 200

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             +A +L+D Y KCG + +A  VF+ +  +SV++WSS+  GY Q E   +A+ LFR+  E
Sbjct: 201 -FVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWE 259

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L+ D F++SS++   A  A + +GKQ++A  +K     +  V++S++DMY KCG I+E
Sbjct: 260 TGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEE 319

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + ++F ++  +NVV W  +I+G  +H  + E + LF KM    + P+ V +++VLSAC H
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLV + Q+YF  +  +  + P + HYSC+VD+L RAG++ EA +LI  +P   S ++W 
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL++CR HG+LEL     + L  ++  N  NY+++SN++A  G W+E  ++RKL +   
Sbjct: 440 SLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESD 499

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK  G+SW+E+  ++H F  G+  HP   +I+  L E+   + ++LG+    ++ LH +
Sbjct: 500 VKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDEL-QKLGYKVETQHDLHQV 558

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
            E  K+E LR HSEKLA  + L    L   P   IR+ KNLR+CGDCH F+K  SK    
Sbjct: 559 GESIKQELLRHHSEKLAFTMGL----LFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCR 614

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD  RFH F+ G CSCGD+W
Sbjct: 615 DVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 216/413 (52%), Gaps = 12/413 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+K  LL  G   H  ++ MG   DL+ +N LI+MY+KCG ++ A  VFD+M  R++
Sbjct: 71  LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++    QNG     L L  QM       +EFT+S+ + A     ++     +H  
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + N  V  +++D+Y+KCG + +A  +F+ MP +S++TW++M AGYV     ++ 
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LFRK  E G   D+F  +S + AC  L ++  G Q++  L  SGF  ++   +A SL+
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNI--FVASSLI 308

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG + E+ +VF  +E+++V+ W+++I G ++     E M LF ++++  L  +  
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              S++       LV +G++      K     P+    S    +VD   + G I EA +L
Sbjct: 369 TFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSC---MVDTLSRAGQIFEAYDL 425

Query: 375 FNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +++P     + W  ++     HG  + A    +K+   D+EP       +LS
Sbjct: 426 ISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLS 476



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           L+ QGK  HA    +    D   SN +++MY KCG +D A ++F+EMP +++V+W  +I 
Sbjct: 79  LLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIG 138

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
              ++G   EA+ L  +M  +          +VL AC+    + E Q           M 
Sbjct: 139 SLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ-LLHAFAIKAAMD 197

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD-----LELGR 506
             +   + ++D   + G + +A  + ESMP + S+  W + ++A  V  +     L L R
Sbjct: 198 LNVFVATALLDVYAKCGLMKDAVCVFESMPDR-SVVTWSS-MAAGYVQNEMYEQALALFR 255

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAG 534
           +  E  L+ D      ++M S I A AG
Sbjct: 256 KAWETGLKHD-----QFLMSSVICACAG 278


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/572 (37%), Positives = 336/572 (58%), Gaps = 16/572 (2%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +E G +IH      GF    +  N ++ MY+KCG ++EA  +F+ +  +++++W+AMI  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 189 YVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           Y L G   + LLLF +M+  G + P+  TFT    ACG +  +  G +IH   + SG   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           S   ++  +L++ YV+CG L EAR+VFD ++     SW+S+I    +   L EA+ELF +
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKC 365
           +    +      L+S++   A    ++ GKQIH+      SG  +SV    +++DMY KC
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLD--ASGFHSSVLAQTALLDMYAKC 238

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ ++++F  M  +N V+WT +I    +HG   EA+ LF++M L+ +  D   ++ VL
Sbjct: 239 GSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVL 298

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSH+GL++ES E+F  +  D  + P   HY   +D++GRAGRL +A+ LI SMP  P 
Sbjct: 299 RACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPE 358

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
              W+TLL+ACR+H   E   +V E+L +L  ++ + Y ++ N++A  G + +  R+RK 
Sbjct: 359 TLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKG 418

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK---RMKEELGFVYG 602
              +GLKKV G+S++EV  ++H F  GD  HP  ++I   L+E+EK   RM+E  G+V  
Sbjct: 419 MTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEI---LLELEKLGGRMREA-GYVPN 474

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
            K  LH + EE KE+ + +HSEKLAI   L+       PG  + + KNLRVC DCH   K
Sbjct: 475 TKDVLHAVNEEEKEQLIGLHSEKLAIAFGLI----ATPPGTPLLIVKNLRVCSDCHAATK 530

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            ++KI++   VVRD  RFH FE G CSC DYW
Sbjct: 531 VIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 10/400 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           ++ G ++H  L   GF    +  N L+ MYAKCG ++ A A+F+ +LER VVSW+A++  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 88  FLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG--F 144
           +  +G  +  L LF +M     V+PN  T +    A GV+  +E G +IH + M SG   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
             N ++ N++++MY +CG + EA ++FD M      +W +MI          + L LF +
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G  P   T  S L AC   G++  G QIH  L  SGF  SV    A  L+D Y KC
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTA--LLDMYAKC 238

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L  + +VF  +E ++ +SW+++I   AQ     EA+ELF+++    +  D      ++
Sbjct: 239 GSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVL 298

Query: 325 GVFADFALVEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KN 382
              +   L+++  +  H+           +     +D   + G + +A EL + MP    
Sbjct: 299 RACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPE 358

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAY 421
            +TW  ++     H  A+ A  +    LL  + P D +AY
Sbjct: 359 TLTWKTLLNACRIHSQAERATKVAE--LLSKLAPEDSMAY 396



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 2/174 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+ +  L  G Q+H  L   GF   ++    L+DMYAKCG +  +  VF  M 
Sbjct: 193 LASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAME 252

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN VSWTA++    Q+G     L LF +M    +  +  T    ++A      ++  ++
Sbjct: 253 TRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLE 312

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMI 186
             H M                +D   + GR+ +A  +   MP     +TW  ++
Sbjct: 313 FFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLL 366


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/681 (34%), Positives = 376/681 (55%), Gaps = 16/681 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+   L  G  +H   V  G +  + ++N L+ MYA+CG+M  A  VFD   ER+ VSW
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK--ASGVLSSVENGMQIHGMC 139
            AL+ G+++ G     L +F  M  S +  N F L + IK  A      ++    +HG  
Sbjct: 184 NALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCV 243

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------VLAG 193
           +K+GF+ +  + ++++ MY+K G ++EA  +F  +   +++ +NAMIAG       V   
Sbjct: 244 VKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTD 303

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L L+ ++Q  G  P EFTF+S ++AC   G +  G QIHG ++   F       I
Sbjct: 304 VLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCF--QGDDFI 361

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+D Y+  GC+ +  R F  + ++ V++W+++I G  Q E    A+ LF +L    L
Sbjct: 362 GSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGL 421

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D F +SS+M   A  A+   G+QI  +A K   G  T++ NS + MY + G +  A  
Sbjct: 422 KPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVR 481

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F EM   ++V+W+ +I+ + +HG A++A+  F +M+   V P+ + +L VL+ACSH GL
Sbjct: 482 RFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGL 541

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V+E  +Y+  +  +  + P I+H +C+VD LGRAGRL +A+  I          IW++LL
Sbjct: 542 VDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLL 601

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           ++CR+H D+E G+ V + ++ L   +  +YV + NI+ DAG  +   ++R + + +G+KK
Sbjct: 602 ASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKK 661

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SW+E+   +H F  GD +HP +  I+  L EM  ++ +          +   I+ E
Sbjct: 662 EPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNE 721

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
             +  +  HSEKLA+ L L+    +      IRV KNLRVC DCH  +K +SK  K   V
Sbjct: 722 --QSWMNWHSEKLAVALGLI----HLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIV 775

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           +RDA RFH F  G CSC DYW
Sbjct: 776 LRDAIRFHHFRDGSCSCADYW 796



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 213/420 (50%), Gaps = 16/420 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR CS      +   +H  +V+   S  L L N L+  Y + G    A  + D+M   N 
Sbjct: 24  LRSCSAP---RHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNA 78

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VS+  L+  + + G  +A L  F +   S+ V+ + FT +  + A      +  G  +H 
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +  G      V NS++ MY++CG + +A ++FD    +  ++WNA+++GYV AG  D 
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDD 198

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGG-GTQIHGFLITSGFPYSVKTVIAG 255
            L +F  M+  G   + F   S +K C GS   V      +HG ++ +GF   V   +A 
Sbjct: 199 MLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV--FLAS 256

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN------LAEAMELFRQLR 309
           ++V  Y K G L EA  +F  +   +V+ ++++I G  ++E       L EA+ L+ +++
Sbjct: 257 AMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQ 316

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            R ++   F  SS++        +E GKQIH    K     D  + ++++D+YL  G ++
Sbjct: 317 SRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCME 376

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +    F  +P ++VVTWT +I+G  ++ L + A+ LF ++L   ++PD     +V++AC+
Sbjct: 377 DGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACA 436



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 181/383 (47%), Gaps = 23/383 (6%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           S+  +   +H   +++    +  + N+++  Y + G    A R+ D MP  + +++N +I
Sbjct: 28  SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLI 85

Query: 187 AGYVLAGYSDKGLLLF-RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
             Y  AG  +  L  F R  +  G   D FT+ + L AC   G +  G  +H   +  G 
Sbjct: 86  DAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGI 145

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   ++ SLV  Y +CG + +AR+VFD  +++  +SW++L+ GY +     + + +F
Sbjct: 146 AGGV--FVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVF 203

Query: 306 RQLRERSLQVDGFVLSSMMGVFA--DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
             +R   + ++ F L S++   A  D  +++    +H    K     D  +++++V MY 
Sbjct: 204 AMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYA 263

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA------KEAVGLFRKMLLDDVEPD 417
           K G + EA  LF  +   NVV +  +I G  +   A      +EA+ L+ ++    +EP 
Sbjct: 264 KKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPT 323

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIVDSLGRAGRLDEA 473
              + +V+ AC+ +G +E     F +  + + +K   +      S ++D    +G +++ 
Sbjct: 324 EFTFSSVIRACNLAGDIE-----FGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDG 378

Query: 474 KNLIESMPVKPSIAIWQTLLSAC 496
                S+P K  +  W  ++S C
Sbjct: 379 FRCFTSVP-KQDVVTWTAMISGC 400


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/598 (35%), Positives = 358/598 (59%), Gaps = 3/598 (0%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           +   A   R C+    L  G QLHG  +K  F  D+++    +DMY KC  ++ A  +F+
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            +   N+ S+ A++ G+ ++      L +F  +  S +  +E +LS   +A  V+     
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G+Q+HG+ MKS  + N  V N+I+DMY KCG + EA  +F+ M ++  ++WNA+IA +  
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  +K L LF  M + G  PDEFT+ S LKAC    ++  G +IH  +I S     + +
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRL--GLDS 512

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +L+D Y KCG + +A ++ D + +++V+SW+++I G++ ++   EA + F ++ E 
Sbjct: 513 FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +  D F  ++++   A+   VE GKQIHA   K     D  +S+++VDMY KCG + + 
Sbjct: 573 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 632

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F + P ++ VTW  ++ GY +HGL +EA+ +F  M L++V+P+   +LAVL AC H 
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 692

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+   YF  + ++  + P++EHYSC+VD +GR+G++ +A  LIE MP +    IW+T
Sbjct: 693 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 752

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLS C++HG++E+  +    +L+L+ ++   YV++SNI+A+AG WNE  +LRK+ R  GL
Sbjct: 753 LLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 812

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           KK  G SW+E+  E+H F  GD  HP +++I++ L  +   MK  +G++    + L+D
Sbjct: 813 KKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK-WVGYMPDTDFILND 869



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 286/527 (54%), Gaps = 13/527 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYG--VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           V +R   A  L+ CS   L D+G  +Q+HG  VKMGF  D++  + L+DMYAKC +++ +
Sbjct: 171 VFDRTTFAVVLKSCSS--LEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              F  M E+N VSW+A++ G +QN + +  L LF +M  + V  ++ T ++  ++   L
Sbjct: 229 IQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGL 288

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           S++  G Q+HG  +K+ F  + V+G + +DMY KC  +++A ++F+ +P  +L ++NA+I
Sbjct: 289 SALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAII 348

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY  +    + L +FR +Q+ G   DE + +   +AC  +     G Q+HG  + S   
Sbjct: 349 VGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 408

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            ++   +A +++D Y KCG LVEA  VF+ +  +  +SW+++I  + Q  N  + + LF 
Sbjct: 409 SNI--CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 466

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            + +  ++ D F   S++   A +  +  G +IH    K   GLD+ V  +++DMY KCG
Sbjct: 467 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCG 526

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++++A +L + +  + VV+W  II+G+     ++EA   F KML   V+PD   Y  +L 
Sbjct: 527 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 586

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            C++   VE  ++  +++   K ++      S +VD   + G + + + + E  P +  +
Sbjct: 587 TCANLVTVELGKQIHAQIIK-KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 645

Query: 487 AIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHA 531
             W  ++     HG   LG E  +I   ++L+   P +   ++ + A
Sbjct: 646 T-WNAMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVLRA 688



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 287/553 (51%), Gaps = 50/553 (9%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--------- 60
           ++++  +   + CS    L  G Q H  ++   F   + + N LI MY KC         
Sbjct: 40  TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKV 99

Query: 61  ----------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
                                 G++  A  +FD M ER+VVSW +L+ G+L NG+ +  +
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVI 159

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            +F QMG      +  T +  +K+   L     G+QIHG+ +K GF+ + V G++++DMY
Sbjct: 160 DVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 219

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           +KC +++ + + F  MP K+ ++W+A+IAG V       GL LF++MQ+ G    + TF 
Sbjct: 220 AKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFA 279

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S  ++C  L ++  G+Q+HG  + + F   V  VI  + +D Y+KC  L +A+++F+ + 
Sbjct: 280 SVFRSCAGLSALRLGSQLHGHALKTDFGTDV--VIGTATLDMYMKCNNLSDAQKLFNSLP 337

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE---Q 335
             ++ S++++I+GYA+ +   EA+ +FR L++  L +D   LS   G F   A+++   +
Sbjct: 338 NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS---GAFRACAVIKGDLE 394

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G Q+H  + K     +  V+N+I+DMY KCG + EA  +F EM  ++ V+W  II  + +
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           +G  ++ + LF  ML   +EPD   Y +VL AC+    +    E  +R+     +K R+ 
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRI-----IKSRLG 509

Query: 456 HYS----CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             S     ++D   + G +++A+ L + +  + ++  W  ++S   +    E  ++    
Sbjct: 510 LDSFVGIALIDMYSKCGMMEKAEKLHDRL-AEQTVVSWNAIISGFSLQKQSEEAQKTFSK 568

Query: 512 LLRLDGDNPVNYV 524
           +L + G +P N+ 
Sbjct: 569 MLEM-GVDPDNFT 580


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/624 (36%), Positives = 345/624 (55%), Gaps = 39/624 (6%)

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           Q+   + KP   T    I+      ++E G ++H     SGF    V+ N ++ MY+KCG
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI----------- 211
            + +A ++FD MP + L +WN M+ GY   G  ++   LF +M E               
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 212 ---------------------PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                                P+ FT +  + A  ++  +  G +IHG ++ +G      
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL--DSD 252

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            V+  SL+D Y KCGC+ EAR +FD I +K V+SW+S+I  Y +     E   LF +L  
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
              + + +  + ++   AD    E GKQ+H Y  +V     +  S+S+VDMY KCG I+ 
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  + +  P  ++V+WT +I G  ++G   EA+  F  +L    +PD V ++ VLSAC+H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVE+  E+F  +    R+    +HY+C+VD L R+GR ++ K++I  MP+KPS  +W 
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           ++L  C  +G+++L  E  + L +++ +NPV YV M+NI+A AG W E  ++RK  +  G
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           + K  G SW E+ ++ H F   D +HP+  +I + L E+ K+MKEE G+V      LHD+
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEE-GYVPATSLVLHDV 611

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           ++E KEE+L  HSEKLA+  A+    L+ + G  I+VFKNLR C DCH  IK +S I K 
Sbjct: 612 EDEQKEENLVYHSEKLAVAFAI----LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKR 667

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
              VRD+TRFH FE G CSCGDYW
Sbjct: 668 KITVRDSTRFHCFENGQCSCGDYW 691



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 231/466 (49%), Gaps = 49/466 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM--------------- 63
           ++ CS+   L+ G ++H  +   GF   +++ N L+ MYAKCG +               
Sbjct: 92  IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151

Query: 64  -------NGACAV---------FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS- 106
                  NG   V         FD+M E++  SWTA++ G+++    +  L L+  M   
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            + +PN FT+S  + A+  +  +  G +IHG  +++G + + V+ +S++DMY KCG I+E
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD +  K +++W +MI  Y  +    +G  LF ++    E P+E+TF   L AC  
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331

Query: 227 LGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           L +   G Q+HG++   GF PYS  +    SLVD Y KCG +  A+ V D   +  ++SW
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFAS---SSLVDMYTKCGNIESAKHVVDGCPKPDLVSW 388

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAA 344
           +SLI G AQ     EA++ F  L +   + D     +++       LVE+G +  ++   
Sbjct: 389 TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITE 448

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAK 400
           K      +     +VD+  + G  ++   + +EMP+K +   W  ++ G   YG   LA+
Sbjct: 449 KHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAE 508

Query: 401 EAVG-LFRKMLLDDVEPDG-VAYLAVLSACSHSGLVEESQEYFSRL 444
           EA   LF+      +EP+  V Y+ + +  + +G  EE  +   R+
Sbjct: 509 EAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)

Query: 3   RVSFSLVSE---------RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDL 53
           R  FSL SE             A  L  C+     + G Q+HG + ++GF      ++ L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360

Query: 54  IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE 113
           +DMY KCG +  A  V D   + ++VSWT+L+ G  QNG     L  F  +  S  KP+ 
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420

Query: 114 FTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            T    + A      VE G++  + +  K            ++D+ ++ GR  +   +  
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480

Query: 173 VMPAK-SLITWNAMIAGYVLAGYSD 196
            MP K S   W +++ G    G  D
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNID 505


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/581 (37%), Positives = 338/581 (58%), Gaps = 7/581 (1%)

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
           FTL   ++      S+  G   HG+ +  G   + V  N +I++Y+KCG+ + A R+FD 
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           M  +S+I+WN MIAGY       + L LF +M   G    EFT +STL AC +  ++   
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            Q+H   I      S  + +  + +D Y KC  + +A  VF+ + +K+ ++WSSL  G+ 
Sbjct: 177 KQLHTIAIKLALDSS--SFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           Q     E + LF+  +   +Q+  F +SS++   A  AL+ +G Q+HA   K     +  
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V+ S+VD+Y KCG I+++ E+F +M  KNVV W  +I  + +H  + EA+ LF KM    
Sbjct: 295 VATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           + P+ V YL++LSACSH+GLVEE + YF+ L +D+  +P + HYSC+VD LGR+G+ DEA
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
             L++ MP +P+ ++W +LL + R+H ++ L R   E L RL+ +N  N+V++SN++A +
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G+W      RK  R  G KK  GRSW+E   +IH F  G+  HP    ++  L E+   M
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           + ++      +  LHD+  + KEE L+ HSEKLA    L+    +  P   I ++KNLR+
Sbjct: 535 R-KISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLI----SLPPNIPITIYKNLRI 589

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CGDCH F+K +S I +   +VRD  RFH F+ G CSCGD+W
Sbjct: 590 CGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 199/369 (53%), Gaps = 9/369 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L+ C+K   L  G   HG  +  G   D +  N LI++Y KCG+ + A  VFD M 
Sbjct: 59  LHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMS 118

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+++SW  ++ G+  N      L LF +M     +  EFTLS+ + A     ++    Q
Sbjct: 119 VRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQ 178

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + +K   + +  VG + +D+Y+KC  I +A  +F+ MP K+ +TW+++ AG+V  G 
Sbjct: 179 LHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGL 238

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF+  Q  G    EFT +S L  C SL  +  GTQ+H  ++  GF  ++   +A
Sbjct: 239 HEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNL--FVA 296

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SLVD Y KCG + ++  VF  +E+K+V+ W+++I  +++  +  EAM LF ++++  + 
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356

Query: 315 VDGFVLSSMMGVFADFALVEQGKQ----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
            +     S++   +   LVE+G+     + +     P+ L  S    +VD+  + G  DE
Sbjct: 357 PNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSC---MVDVLGRSGKTDE 413

Query: 371 ATELFNEMP 379
           A +L ++MP
Sbjct: 414 AWKLLDKMP 422



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 54/390 (13%)

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + DK L+   +     ++ D FT    L+ C    S+  G   HG  I  G      TV 
Sbjct: 41  HKDKNLVRVER-----DLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLV--TDTVT 93

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              L++ Y KCG    ARRVFD +  +S+ISW+++I GY       EA++LF ++     
Sbjct: 94  CNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGT 153

Query: 314 QVDGFVLSSMM-GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           Q+  F LSS +    A +A++E  KQ+H  A K+     + V  + +D+Y KC +I +A 
Sbjct: 154 QMTEFTLSSTLCACAAKYAIIE-CKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDAC 212

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS--- 429
            +F  MP K  VTW+ +  G+ ++GL +E + LF+    + ++       ++LS C+   
Sbjct: 213 WVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLA 272

Query: 430 --------HS------------------------GLVEESQEYFSRLCNDKRMKPRIEHY 457
                   H+                        G +E+S E F+ +      +  +  +
Sbjct: 273 LIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADM-----EEKNVVLW 327

Query: 458 SCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILL- 513
           + ++ S  R     EA  L E M    + P+   + ++LSAC   G +E GR    +LL 
Sbjct: 328 NAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLS 387

Query: 514 -RLDGDNPVNYVMMSNIHADAGSWNECERL 542
            R    N ++Y  M ++   +G  +E  +L
Sbjct: 388 DRTAEPNVLHYSCMVDVLGRSGKTDEAWKL 417


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/678 (33%), Positives = 380/678 (56%), Gaps = 24/678 (3%)

Query: 28  LDYGVQLHGALV---KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTAL 84
           L +G  +H  LV   +     D+   N LI++Y+KCG+   A  +FD+ML+RNVVSW+AL
Sbjct: 39  LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSAL 98

Query: 85  MCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           M G+L  G     L LF  + S  S  PNE+  +  +        V+ G Q HG  +KSG
Sbjct: 99  MMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSG 158

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
              +  V N++I MYS+C  ++ A ++ D +P   + ++N++++  V +G   +   + +
Sbjct: 159 LLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLK 218

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M +   I D  T+ S L  C  +  +  G QIH  L+ +G  + V   ++ +L+D Y K
Sbjct: 219 RMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDV--FVSSTLIDTYGK 276

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG ++ AR+ FD +  ++V++W++++  Y Q  +  E + LF ++     + + F  + +
Sbjct: 277 CGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVL 336

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVK 381
           +   A    +  G  +H     V SG      V N++++MY K G ID +  +F+ M  +
Sbjct: 337 LNACASLVALAYGDLLHGRI--VMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNR 394

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           +V+TW  +I GY  HGL K+A+ +F+ M+     P+ V ++ VLSAC H  LV+E   YF
Sbjct: 395 DVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYF 454

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACRVHG 500
            ++     ++P +EHY+C+V  LGRAG LDEA+N +++   VK  +  W+TLL+AC +H 
Sbjct: 455 DQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHR 514

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           +  LG+++ E ++++D  +   Y ++SN+HA A  W+   ++RKL + + +KK  G SW+
Sbjct: 515 NYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWL 574

Query: 561 EVDKEIHFFYGGDDTHP----LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
           ++    H F      HP    + EK+ Q+L      M + LG+   V   LHD+++E KE
Sbjct: 575 DIRNNTHVFVSEGSNHPESTQIFEKVQQLLA-----MIKPLGYAPDVGVVLHDVEDEQKE 629

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+   L++      P   IR+ KNLR+C DCH  +K +SK    + +VRD
Sbjct: 630 GYLSHHSEKLALAYGLMK----IPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRD 685

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH F  G+C+C D+W
Sbjct: 686 ANRFHHFREGLCTCNDHW 703



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 19/303 (6%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C++   L  G+Q+H  L+K G  FD+ +++ LID Y KCGE+  A   FD + +RNVV+W
Sbjct: 239 CAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAW 298

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++  +LQNG+ +  L+LF +M     +PNEFT +  + A   L ++  G  +HG  + 
Sbjct: 299 TAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVM 358

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           SGF+ + +VGN++I+MYSK G I+ +  +F  M  + +ITWNAMI GY   G   + LL+
Sbjct: 359 SGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLV 418

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG----TQI-HGFLITSGFP-YSVKTVIAG 255
           F+ M   GE P+  TF   L AC  L  V  G     QI   F +  G   Y+    + G
Sbjct: 419 FQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLG 478

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQK--SVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
                  + G L EA        Q    V++W +L+       N      L +Q+ E  +
Sbjct: 479 -------RAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRN----YNLGKQITETVI 527

Query: 314 QVD 316
           Q+D
Sbjct: 528 QMD 530



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 184/374 (49%), Gaps = 10/374 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L CC+ +  +  G Q HG L+K G      + N LI MY++C  ++ A  + D +   +V
Sbjct: 135 LSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDV 194

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            S+ +++   +++G       +  +M    V  +  T  + +     +  ++ G+QIH  
Sbjct: 195 FSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQ 254

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+G  ++  V +++ID Y KCG +  A + FD +  ++++ W A++  Y+  G+ ++ 
Sbjct: 255 LLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEET 314

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF KM+     P+EFTF   L AC SL ++  G  +HG ++ SGF   +  ++  +L+
Sbjct: 315 LNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHL--IVGNALI 372

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K G +  +  VF  +  + VI+W+++I GY+      +A+ +F+ +       +  
Sbjct: 373 NMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYV 432

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
               ++      ALV++G        K   V  GL+      +V +  + GL+DEA    
Sbjct: 433 TFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYT--CMVALLGRAGLLDEAE--- 487

Query: 376 NEMPVKNVVTWTVI 389
           N M     V W V+
Sbjct: 488 NFMKTTTQVKWDVV 501


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/595 (36%), Positives = 348/595 (58%), Gaps = 41/595 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K+GF+ + ++ N+++D+Y KCG I +A ++FD MP +  ++W +++  +  A 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 194 YSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              + L +   M  H G  PD F F   ++AC SLG +  G Q+H   + S F      V
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXF--CDDEV 141

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL+D Y KCG   EAR VFD I  K+ +SW+S+I GYA+     EAM+LF Q   R+
Sbjct: 142 VKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201

Query: 313 L--------------------------------QVDGFVLSSMMGVFADFALVEQGKQIH 340
           L                                 VD  VLSS++G  A+ AL+E GKQIH
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIH 261

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
                +       +SN++VDMY KC  I  A ++F  MP K+V++WT II G  +HG A+
Sbjct: 262 GLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAE 321

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ L+ +M+L  ++P+ V ++ +L ACSH+GLV   +E F  +  D  + P ++HY+C+
Sbjct: 322 EALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D L R+G LDEA+NL++ +P KP    W +LLSAC  H +LE+G  + + +L L  ++P
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDP 441

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLT 579
             Y+++SN++A A  W    ++RKL  S  ++K  G S ++  K+   F+ G+   HP+ 
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
            +I  +L +++  M++  G+V    + L+DI+++ KE+ L  HSE+LA+   L++     
Sbjct: 502 NEICNLLKDLDAEMRKR-GYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKA---- 556

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG +IR+ KNLR+CGDCH  +K +S I+K   +VRDATR+H F+ G CSC D+W
Sbjct: 557 VPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 223/444 (50%), Gaps = 41/444 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++        +LH  ++K GF    +L+N L+D+Y KCG +  A  +FD+M  R+ 
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++    +    +  LS+   M +   ++P+ F  +  ++A   L  +  G Q+H 
Sbjct: 70  VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM----------------------- 174
             M S F  + VV +S+IDMY+KCG+ +EA  +FD +                       
Sbjct: 130 RFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCE 189

Query: 175 --------PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-EIPDEFTFTSTLKACG 225
                   P ++L +W A+I+G + +G+      LF +M+  G +I D    +S +  C 
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L  +  G QIHG +I  GF   +   I+ +LVD Y KC  ++ A+ +F  + +K VISW
Sbjct: 250 NLALLELGKQIHGLVIALGFESCL--FISNALVDMYAKCSDILAAKDIFYRMPRKDVISW 307

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +S+I+G AQ     EA+ L+ ++    ++ +      ++   +   LV +G+++   +  
Sbjct: 308 TSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFR-SMT 366

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
               ++ S+ +   ++D+  + G +DEA  L +++P K +  TW  +++   +H   +  
Sbjct: 367 TDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMG 426

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
           V +  ++L  D++P+  +   +LS
Sbjct: 427 VRIADRVL--DLKPEDPSTYILLS 448



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 74/396 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F   L+ C    S     ++H  +I +GF  S  ++++ +L+D Y KCG + +A ++FD 
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKS--SLLSNTLLDVYGKCGLIPQALQLFDE 63

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQ 335
           +  +  +SW+S++  + +       + +   +     LQ D FV + ++   +    +  
Sbjct: 64  MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GKQ+HA         D  V +S++DMY KCG  DEA  +F+ +  KN V+WT +I+GY +
Sbjct: 124 GKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYAR 183

Query: 396 HGLAKEAVGLF----------------------------------RKMLLDDVEPDGVAY 421
            G   EA+ LF                                  R+  +D V+P  +  
Sbjct: 184 SGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDP--LVL 241

Query: 422 LAVLSACSHSGLVE--------------ESQEYFSRLCNDKRMK--------------PR 453
            +V+  C++  L+E              ES  + S    D   K              PR
Sbjct: 242 SSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301

Query: 454 --IEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREV 508
             +  ++ I+    + G+ +EA  L + M    +KP+   +  LL AC   G +  GRE+
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361

Query: 509 GEILLRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
              +      NP   +Y  + ++ + +G  +E E L
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENL 397



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 126/242 (52%), Gaps = 16/242 (6%)

Query: 5   SFSLVSERQR----------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLI 54
           SFSL +E +R          L+  +  C+   LL+ G Q+HG ++ +GF   L ++N L+
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280

Query: 55  DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEF 114
           DMYAKC ++  A  +F +M  ++V+SWT+++ G  Q+G A+  L+L+ +M  S +KPNE 
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFD 172
           T    + A      V  G ++    M + +  NP + +   ++D+ S+ G ++EA  + D
Sbjct: 341 TFVGLLYACSHAGLVSRGRELF-RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLD 399

Query: 173 VMPAKS-LITWNAMIAGYVLAGYSDKGLLLF-RKMQEHGEIPDEFTFTSTLKACGSL-GS 229
            +P K    TW ++++  +     + G+ +  R +    E P  +   S + A   + GS
Sbjct: 400 KIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGS 459

Query: 230 VG 231
           V 
Sbjct: 460 VS 461


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/672 (35%), Positives = 384/672 (57%), Gaps = 20/672 (2%)

Query: 31   GVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++H  +++ G + + + + N L++MYAK G +  AC+VF+ M+E++ VSW +L+ G  
Sbjct: 405  GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 464

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            QN  ++     F +M  +   P+ FTL + + +   L  +  G QIH   +K G + +  
Sbjct: 465  QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 524

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKMQEH 208
            V N+++ +Y++ G   E  ++F +MP    ++WN++I     +  S  + +  F +M   
Sbjct: 525  VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRG 584

Query: 209  GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            G      TF + L A  SL       QIH  ++   +  S  T I  +L+  Y KCG + 
Sbjct: 585  GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK--YCLSDDTAIGNALLSCYGKCGEMN 642

Query: 269  EARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            E  ++F  + E +  +SW+S+I GY   E L +AM+L   + ++  ++D F  ++++   
Sbjct: 643  ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSAC 702

Query: 328  ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
            A  A +E+G ++HA   +     D  V +++VDMY KCG ID A+  F  MP++NV +W 
Sbjct: 703  ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWN 762

Query: 388  VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
             +I+GY +HG  ++A+ LF +M+LD   PD V ++ VLSACSH G VEE  E+F  +   
Sbjct: 763  SMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEV 822

Query: 448  KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-DLELG 505
             R+ PR+EH+SC+VD LGRAG+LDE  + I SMP+KP++ IW+T+L A CR +G + ELG
Sbjct: 823  YRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELG 882

Query: 506  REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
            R   E+LL L+  N VNYV+++N++A    W +  + R   +   +KK AG SWV +   
Sbjct: 883  RRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDG 942

Query: 566  IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
            +H F  GD  HP  + I+  L E+ ++M++  G++   KYAL D++ E+KEE L  HSEK
Sbjct: 943  VHVFVAGDKLHPEKDLIYDKLRELNRKMRDA-GYIPQTKYALFDLELENKEELLSYHSEK 1001

Query: 626  LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI----LKLVFVVRDATRFH 681
            +A+   L R     Q    IR+ KNLRVCGDCH     +SKI    LK+     +     
Sbjct: 1002 IAVAFVLTR-----QSALPIRIMKNLRVCGDCHSAFGYISKIIFFFLKMAMKPSNNIWIR 1056

Query: 682  RFEGGVCSCGDY 693
            R +   C CGD+
Sbjct: 1057 RQQ---CPCGDW 1065



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 232/432 (53%), Gaps = 30/432 (6%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           CCS+        +LH   +K GF  +L L+N LI++Y + G++  A  +FD+M  RN+V+
Sbjct: 85  CCSEE-----ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVT 139

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHG 137
           W  L+ G+ QNG      + F  M  +   PN +   + ++A   SG  S  + G+QIHG
Sbjct: 140 WACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP-SGCKLGVQIHG 198

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           +  K+ +  + VV N +I MY  C    N+A  +FD +  ++ I+WN++I+ Y   G + 
Sbjct: 199 LISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAV 258

Query: 197 KGLLLFRKMQEHGE----IPDEFTFTSTL-KACGSLG-SVGGGTQIHGFLITSGFPYSVK 250
               LF  MQ+ G      P+E+TF S +  AC S+   +    Q+   +  SGF   + 
Sbjct: 259 SAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDL- 317

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             ++ +LV  + + G   +A+ +F+ +  ++V+S + L++G  +++    A ++F ++++
Sbjct: 318 -YVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKD 376

Query: 311 R-SLQVDGFVLSSMMGVFADFALVEQ----GKQIHAYAAKVPSGLD---TSVSNSIVDMY 362
              +  D +V+  ++  F++F+++E+    G+++HA+  +  +GL+    ++ N +V+MY
Sbjct: 377 LVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIR--TGLNDNKVAIGNGLVNMY 432

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            K G I +A  +F  M  K+ V+W  +I+G  ++  +++A   F +M      P     +
Sbjct: 433 AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLI 492

Query: 423 AVLSACSHSGLV 434
           + LS+C+  G +
Sbjct: 493 STLSSCASLGWI 504



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 202/424 (47%), Gaps = 10/424 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C+    +  G Q+H   +K+G   D+ ++N L+ +YA+ G       VF  M 
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 75  ERNVVSWTALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           E + VSW +++ G L +  A     +  F QM       +  T    + A   LS  E  
Sbjct: 551 EYDQVSWNSVI-GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVS 609

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
            QIH + +K     +  +GN+++  Y KCG +NE  ++F  M   +  ++WN+MI+GY+ 
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 669

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                K + L   M + G+  D FTF + L AC S+ ++  G ++H   I +     V  
Sbjct: 670 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDV-- 727

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V+  +LVD Y KCG +  A R F+L+  ++V SW+S+I GYA+  +  +A++LF ++   
Sbjct: 728 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 787

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLID 369
               D      ++   +    VE+G + H  +      L   V +   +VD+  + G +D
Sbjct: 788 GQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 846

Query: 370 EATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           E  +  N MP+K NV+ W  ++    +       +G     +L ++EP       +L+  
Sbjct: 847 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 906

Query: 429 SHSG 432
             SG
Sbjct: 907 YASG 910



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 206/421 (48%), Gaps = 24/421 (5%)

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E   ++H   +K GF  N  + N++I++Y + G +  A ++FD M  ++L+TW  +I+GY
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG--GTQIHGFLITSGFPY 247
              G  D+    FR M   G IP+ + F S L+AC   G  G   G QIHG +  S   Y
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLI--SKTRY 205

Query: 248 SVKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
               V+   L+  Y  C     +AR VFD I  ++ ISW+S+I  Y++  +   A +LF 
Sbjct: 206 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 265

Query: 307 QLRER----SLQVDGFVLSSMMGVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
            +++     S + + +   S++       DF L    +Q+ A   K     D  VS+++V
Sbjct: 266 SMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVL-EQMLARVEKSGFLQDLYVSSALV 324

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             + + GL D+A  +F +M V+NVV+   ++ G  K    + A  +F +M  D V  +  
Sbjct: 325 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 383

Query: 420 AYLAVLSACSHSGLVEE----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           +Y+ +LSA S   ++EE     +E  + +        ++   + +V+   ++G + +A +
Sbjct: 384 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 443

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHADA 533
           + E M  K S++ W +L+S    +   E   +  E    +R  G  P N+ ++S + + A
Sbjct: 444 VFELMVEKDSVS-WNSLISGLDQN---ECSEDAAESFHRMRRTGSMPSNFTLISTLSSCA 499

Query: 534 G 534
            
Sbjct: 500 S 500


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/677 (34%), Positives = 374/677 (55%), Gaps = 8/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G+++HG +++ GF  D+ +   LI+MY KCG + GA   F ++  R+V
Sbjct: 113 LNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 172

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++   +Q+        L+ +M    V PN+ TL T   A G    +  G  I+ +
Sbjct: 173 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSL 232

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                 E +  V NS ++M+   G + +A R+F+ M  + ++TWN +I  YV      + 
Sbjct: 233 VSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEA 292

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF ++Q+ G   ++ TF   L    SL S+  G  IH  +  +G+   V  V+A +L+
Sbjct: 293 VRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDV--VVATALM 350

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +C    +A ++F  +  K VI+W+ + + YAQ     EA++LF++++    +    
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L +++   A  A +++G+QIH++  +    ++  V  ++++MY KCG + EA  +F +M
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKM 470

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++++ W  ++  Y +HG   E + LF +M LD  + D V++++VLSA SHSG V +  
Sbjct: 471 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGY 530

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACR 497
           +YF  +  D  + P  E Y C+VD LGRAGR+ EA +++  +    P   +W TLL ACR
Sbjct: 531 QYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACR 590

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            H   +  +   E +L  D  +   YV++SN++A AG W+   R+RKL RS+G+KK  GR
Sbjct: 591 THNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGR 650

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S +E+   +H F  GD +HP    I+  L  +   M+   G++   K  LHD+++E KE+
Sbjct: 651 SSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAA-GYIPDTKMILHDVEDERKED 709

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            L  HSE+LAI   L    ++  PG  +RV KNLRVC DCH   K +SK+     +VRD 
Sbjct: 710 MLFYHSERLAIAFGL----MSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDT 765

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC DYW
Sbjct: 766 HRFHNFKDGRCSCKDYW 782



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 257/483 (53%), Gaps = 6/483 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    +D+G ++H  +   GF  + ++   LI MYA+CG +  A  VF+ +  ++V
Sbjct: 12  LQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDV 71

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +WT ++  + Q G+    L +F QM    V P + T    + A     S+++GM+IHG 
Sbjct: 72  FAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQ 131

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GFE +  VG ++I+MY+KCG +  A   F  +  + +++W AMIA  V        
Sbjct: 132 ILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALA 191

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             L+R+MQ  G +P++ T  +   A G    +  G  I+  + +      V+  +  S +
Sbjct: 192 RWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR--VMNSAM 249

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + +   G L +ARR+F+ +  + V++W+ +I  Y Q EN  EA+ LF +L++  ++ +  
Sbjct: 250 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDI 309

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               M+ V+     + +GK IH    +     D  V+ +++ +Y +C    +A ++F +M
Sbjct: 310 TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDM 369

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+V+TWTV+   Y ++G  KEA+ LF++M L+   P     +AVL  C+H   +++ +
Sbjct: 370 GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGR 429

Query: 439 EYFSRLC-NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +  S +  N  RM+  +E  + +++  G+ G++ EA+++ E M  K  I +W ++L A  
Sbjct: 430 QIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKM-AKRDILVWNSMLGAYA 486

Query: 498 VHG 500
            HG
Sbjct: 487 QHG 489



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 169/317 (53%), Gaps = 2/317 (0%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           KP+       ++      +V++G ++H      GFE N +V   +I MY++CG + EA +
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F+++  K +  W  MI  Y   G  D+ L +F +MQE   +P + T+ + L AC S  S
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G +IHG ++  GF   V   +  +L++ Y KCG +  A   F  +E + V+SW+++I
Sbjct: 122 LKDGMEIHGQILQQGFEGDV--FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
               Q +  A A  L+R+++   +  +   L ++   + D   + +GK I++  +     
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            D  V NS ++M+   GL+ +A  LF +M  ++VVTW ++IT Y ++    EAV LF ++
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 410 LLDDVEPDGVAYLAVLS 426
             D ++ + + ++ +L+
Sbjct: 300 QQDGIKANDITFVLMLN 316


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/687 (34%), Positives = 379/687 (55%), Gaps = 34/687 (4%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+   L  G  +H   +  G S  + ++N L+ MY+KCGEM  A  VFD   ER+ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK-----ASGVLSSVENGMQIH 136
            +L+ G+++ G  +  + +F  M    +  N F L + IK       G +   E    +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAE---AVH 235

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------V 190
           G  +K+G + +  + +++IDMY+K G + EAA +F  +   +++ +N MIAG+      +
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
               + + L L+ ++Q  G  P EFTF+S L+AC   G +  G QIHG +I   + +   
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIK--YTFQED 353

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             I  +L+D Y   GC+ +  R F    +  +++W++++ G  Q E   +A+ LF +   
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLI 368
             L+ D F +SS+M   A  A+   G+QI  +A K  SG D  T + NS V MY + G +
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATK--SGFDRFTVMGNSCVHMYARSGDV 471

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           D AT  F EM   +VV+W+ +I+ + +HG A++A+  F +M+   V P+ + +L VL+AC
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLV+E   Y+  +  D  + P I+H +C+VD LGRAGRL +A+  I +        I
Sbjct: 532 SHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVI 591

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W++LL++CR+H DLE G+ V   ++ L+  +  +YV++ N++ DAG  +   + R L + 
Sbjct: 592 WRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQ 651

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           +G+KK  G SW+E+   +H F  GD +HP +  I+  L EM  R++         K A  
Sbjct: 652 RGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE---------KLATT 702

Query: 609 DIQEESKEESL-RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           D +   +E++L   HSEKLA+ L    G ++      IRV KNLRVC DCH  +K +SK 
Sbjct: 703 DTEISKREQNLMNCHSEKLAVAL----GMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKS 758

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                ++RD  RFH F  G CSC DYW
Sbjct: 759 ENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 225/462 (48%), Gaps = 12/462 (2%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
           L L N L+  Y + G    A  + D+M  RN VS+  L+  + + G A   L    +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           + V  + F+ +  + A      +  G  +H + +  G      V NS++ MYSKCG + E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A R+FDV   +  ++WN++++GYV AG  ++ + +F  M+  G   + F   S +K C  
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 227 L--GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++     +HG +I +G    V  V A  ++D Y K G LVEA  +F  +++ +V+ 
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSA--MIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 285 WSSLILGYAQEENL------AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           ++++I G+ + E +      +EA+ L+ +++ R +Q   F  SS++        +E GKQ
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH    K     D  + ++++D+Y   G +++    F   P  ++VTWT +++G  ++ L
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            ++A+ LF + L   ++PD     +V++AC+   +    ++           +  +   S
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           C V    R+G +D A    + M     ++ W  ++S    HG
Sbjct: 461 C-VHMYARSGDVDAATRRFQEMESHDVVS-WSAVISCHAQHG 500


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/671 (33%), Positives = 373/671 (55%), Gaps = 12/671 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD G ++H  +++ G+  D M+ N +++MY KCG++  A  VFD + + NV SWT ++  
Sbjct: 133 LDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAA 192

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS-GFEW 146
           + QNG+    L L  +M  + VKP+ +T +T + A   + ++E    +H   + S G + 
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  VG ++I++Y KCG + EA  +F  +  K +++W++MIA +  +G +   + L   M 
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMD 312

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  P+  TF + L+A  SL +   G +IH  ++ +G  YS    +  +LV  Y   G 
Sbjct: 313 LEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAG--YSDDVCLTSALVKMYCNWGW 370

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR +F+   ++ V+SWSS+I GY+Q E+ A A+ LFR++    +Q +     S +  
Sbjct: 371 VETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDA 430

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A    + +G Q+H     +    D  V+ ++V++Y KCG ++EA  +F  M  KN++TW
Sbjct: 431 CAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTW 490

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           T I   YG++G    ++ L   M L  ++PDG+ ++A+L +C+++G + +   Y++ +  
Sbjct: 491 TSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQ 550

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           D  + P +EH  C+VD LGRAG+L+ A+ LI +M  + S+A W  LL+AC+ H D     
Sbjct: 551 DFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHNDTARAA 609

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              E + +L+  N   YV++S++   AGSW   E  R+    +G++++ GRS +E+   +
Sbjct: 610 RAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRV 669

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY---GVKYALHDIQEESKEESLRVHS 623
           H F    D  P    + ++   +EK  +E  G  Y        L D++E  KE ++  HS
Sbjct: 670 HEFVAASDVLP-HHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHS 728

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           E LA+GL ++    +   G  +R+ KNLR+C DCH   K +SK++     VRD  R H F
Sbjct: 729 EMLALGLGII----STPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHF 784

Query: 684 EGGVCSCGDYW 694
           E GVCSCGDYW
Sbjct: 785 ENGVCSCGDYW 795



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 255/484 (52%), Gaps = 11/484 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD-----LMLNNDLIDMYAKCGEMNGACAVFDKM 73
           L  CS    L  G ++HG +++     D      +L N +I MY +CG  + A  VFD+M
Sbjct: 17  LTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRM 76

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI-KASGVLSSVENG 132
            ++NVV+WT+L+  F   G+    + LF +M  S V P+  T ++ + K SG   +++ G
Sbjct: 77  KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEG 136

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            ++H   M++G+E + +V N +++MY KCG + +A  +FD +   ++ +W  +IA Y   
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQN 196

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G+  + L L  +M + G  PD +TFT+ L AC ++G++     +H   I+S         
Sbjct: 197 GHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISS-TGLDRDAA 255

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +L++ Y KCG L EA  VF  I+ K ++SWSS+I  +AQ      A++L   +    
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ +     +++         + GK+IHA   +     D  +++++V MY   G ++ A 
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETAR 375

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F     ++VV+W+ +I GY ++     A+ LFR+M +D V+P+ V +++ + AC+  G
Sbjct: 376 SIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVG 435

Query: 433 LVEESQEYFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
            +    +   R+ C    +   +   + +V+  G+ GRL+EA+ +   M  K ++  W +
Sbjct: 436 ALRRGTQLHERVRCLG--LDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKNLLTWTS 492

Query: 492 LLSA 495
           +  A
Sbjct: 493 IAMA 496



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           ++  C+    L  G QLH  +  +G   D+ +   L+++Y KCG +  A AVF  M ++N
Sbjct: 427 AIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKN 486

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +++WT++   + QNG+    L L   M    +KP+       + +      +  G+  + 
Sbjct: 487 LLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYN 546

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           + M   F   P V +   ++D+  + G++  A ++ + M  +S + W
Sbjct: 547 L-MTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAW 592


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/743 (32%), Positives = 390/743 (52%), Gaps = 59/743 (7%)

Query: 4   VSFSLVSERQRLADSLRCCSK-NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           ++ ++  +    A  LR CS          Q+H  ++  GF    ++ N LID+Y+K G 
Sbjct: 103 ITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGH 162

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           ++ A  VF+++  ++ VSW A++ G  QNG     + LFCQM  S+V P  +  S+ + A
Sbjct: 163 VDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSA 222

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              +   + G Q+HG  +K G      V N+++ +YS+ G +  A ++F  M  +  I++
Sbjct: 223 CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISY 282

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I+G    G+SD+ L LF KMQ     PD  T  S L AC S+G+   G Q+H ++I 
Sbjct: 283 NSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIK 342

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G   S   +I GSL+D YVKC  +  A   F   E ++V+ W+ +++ Y Q  NL+E+ 
Sbjct: 343 MGM--SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESY 400

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            +F Q++   L  + +   S++        ++ G+QIH    K     +  V + ++DMY
Sbjct: 401 WIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMY 460

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            K G +D A  +   +  ++VV+WT +I GY +H L  EA+ LF++M    +  D + + 
Sbjct: 461 AKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFS 520

Query: 423 AVLSACS-----HSGLVEESQEYFSRLCNDKRM--------------------------- 450
           + +SAC+     + G    +Q Y S    D  +                           
Sbjct: 521 SAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFF 580

Query: 451 ---KPRIEHYSCIVDSLGRAGRLDEAKNLIESM----------------PVKPSIAIWQT 491
              +  +  ++ ++    + G   EA +L E M                P++P   IW+T
Sbjct: 581 EMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRT 640

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLSAC VH ++E+G      LL L+ ++   YV++SN++A +G W+  +R R++ + +G+
Sbjct: 641 LLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGV 700

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  GRSW+EV   IH F+ GD  HPL E+I++ + ++ +R   E+G+V      L+D++
Sbjct: 701 KKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAG-EIGYVQDRYNLLNDVE 759

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E K+ +  +HSEKLA+   L+    N  P   IRV KNLRVC DCH +IK +SKI    
Sbjct: 760 QEQKDPTAYIHSEKLAVAFGLL-SLTNTMP---IRVIKNLRVCNDCHNWIKFVSKISNRA 815

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            VVRDA RFH FEGGVCSC DYW
Sbjct: 816 IVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 254/480 (52%), Gaps = 6/480 (1%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C +   LLD   +LH  + K GF  + +L + LID+Y   GE++ A  +FD +   NV  
Sbjct: 20  CFNSGSLLD-AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSF 78

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMC 139
           W  ++ G L    A   L LF  M + +V P+E T ++ ++A SG  +  +   QIH   
Sbjct: 79  WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +  GF  +P+V N +ID+YSK G ++ A  +F+ +  K  ++W AMI+G    G  D+ +
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           LLF +M +   IP  + F+S L AC  +     G Q+HGF++  G   S +T +  +LV 
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL--SSETFVCNALVT 256

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y + G L+ A ++F  + ++  IS++SLI G AQ      A++LF +++   ++ D   
Sbjct: 257 LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVT 316

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           ++S++   A      +GKQ+H+Y  K+    D  +  S++D+Y+KC  I+ A E F    
Sbjct: 317 VASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE 376

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            +NVV W V++  YG+ G   E+  +F +M ++ + P+   Y ++L  C+  G ++  ++
Sbjct: 377 TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQ 436

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             +++      +  +   S ++D   + G LD A+ +++ +  +  +  W  +++    H
Sbjct: 437 IHTQVIKSG-FQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 52/353 (14%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M+E G   +  T+    + C + GS+    ++H  +  SGF    + V+   L+D Y+  
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGF--DGEDVLGSRLIDIYLAH 58

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G +  A ++FD I   +V  W+ +I G   ++  ++ + LF  +   ++  D    +S++
Sbjct: 59  GEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118

Query: 325 ----GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
               G  A F + E   QIHA       G    V N ++D+Y K G +D A  +F  + +
Sbjct: 119 RACSGGKAPFQVTE---QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFL 175

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS----------- 429
           K+ V+W  +I+G  ++G   EA+ LF +M    V P    + +VLSAC+           
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL 235

Query: 430 HSGLVE------------------------ESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           H  +V+                         +++ FS++    R+      Y+ ++  L 
Sbjct: 236 HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS-----YNSLISGLA 290

Query: 466 RAGRLDEAKNLIESMPV---KPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           + G  D A  L E M +   KP      +LLSAC   G    G+++   ++++
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/706 (34%), Positives = 383/706 (54%), Gaps = 59/706 (8%)

Query: 28  LDYGVQLHGALVKMGFS-----FDLMLNNDLIDM------YAKCGEMNGACAVFDKMLER 76
           + Y   + G L    FS     FD M + DL         YA+   +  A  +FD M E+
Sbjct: 65  VSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEK 124

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS-VENG-MQ 134
           +VVSW A++ G++++G+      +F +M      P++ ++S N    G+L++ V +G ++
Sbjct: 125 DVVSWNAMLSGYVRSGHVDEARDVFDRM------PHKNSISWN----GLLAAYVRSGRLE 174

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
                 +S  +W  +  N ++  Y K   + +A ++FD +P + LI+WN MI+GY     
Sbjct: 175 EARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYA---- 230

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D  L   R++ E   + D FT+T+ + A    G +    ++   +       S   +IA
Sbjct: 231 QDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM-PQKREMSYNVMIA 289

Query: 255 GS--------------------------LVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           G                           ++  Y + G L +AR +FD++ Q+  +SW+++
Sbjct: 290 GYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAI 349

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I GYAQ     EAM +  +++     ++       +   AD A +E GKQ+H    +   
Sbjct: 350 IAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGY 409

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
                V N++V MY KCG IDEA ++F  +  K++V+W  ++ GY +HG  ++A+ +F  
Sbjct: 410 EKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFES 469

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M+   V+PD +  + VLSACSH+GL +   EYF  +  D  + P  +HY+C++D LGRAG
Sbjct: 470 MITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAG 529

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            L+EA+NLI +MP +P  A W  LL A R+HG++ELG +  E++ +++  N   YV++SN
Sbjct: 530 CLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSN 589

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           ++A +G W +  ++R   R  G++K  G SWVEV  +IH F  GD  HP   +I+  L E
Sbjct: 590 LYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEE 649

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           ++ +MK E G+V   K  LHD++EE K+  L+ HSEKLA+      G L    GK IRV 
Sbjct: 650 LDLKMKHE-GYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAF----GILTMPSGKPIRVM 704

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +SKI+  + +VRD+ R+H F  G+CSC DYW
Sbjct: 705 KNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 188/394 (47%), Gaps = 61/394 (15%)

Query: 54  IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE 113
           I  + + G  + A  VFD M  RN VS+ A++ G+L+N        LF +M      P++
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM------PHK 93

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
              S N+  +G                                 Y++  R+ +A  +FD 
Sbjct: 94  DLFSWNLMLTG---------------------------------YARNRRLRDARMLFDS 120

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           MP K +++WNAM++GYV +G+ D+   +F +M     I    ++   L A    G +   
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI----SWNGLLAAYVRSGRLEEA 176

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
            ++  F   S +    + +    L+  YVK   L +AR++FD I  + +ISW+++I GYA
Sbjct: 177 RRL--FESKSDW----ELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYA 230

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           Q+ +L++A  LF    E S   D F  ++M+  +    ++++ +++     ++P   + S
Sbjct: 231 QDGDLSQARRLF----EESPVRDVFTWTAMVYAYVQDGMLDEARRVF---DEMPQKREMS 283

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
             N ++  Y +   +D   ELF EMP  N+ +W ++I+GY ++G   +A  LF  M    
Sbjct: 284 Y-NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMM---- 338

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            + D V++ A+++  + +GL EE+      +  D
Sbjct: 339 PQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRD 372



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L+ G Q+HG +V+ G+    ++ N L+ MY KCG ++ A  VF  +  ++
Sbjct: 384 ALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKD 443

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IH 136
           +VSW  ++ G+ ++G  +  L++F  M ++ VKP+E T+   + A       + G +  H
Sbjct: 444 IVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFH 503

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYS 195
            M    G   N      +ID+  + G + EA  +   MP      TW A++    + G  
Sbjct: 504 SMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNM 563

Query: 196 DKG 198
           + G
Sbjct: 564 ELG 566


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/586 (37%), Positives = 342/586 (58%), Gaps = 9/586 (1%)

Query: 111 PNEFTLSTNIKASGVLS-SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           P+ +   T+I  S V S S+  G Q+HG  + SG   + V+   ++D+Y+ CG++  A R
Sbjct: 59  PHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARR 118

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD MP +++  WN +I  Y   G  +  + L+R M EHG  PD FT+   LKAC +L  
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLD 178

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G ++H  +  SG  +     +   +VD Y KCGC+ +AR VFD I  +  + W+S+I
Sbjct: 179 LETGREVHQRV--SGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMI 236

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
             Y Q     EA+ L R +    +      L S +   AD A + +G+++H +  +   G
Sbjct: 237 AAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFG 296

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           L   +  S+VDMY K G +  A  LF ++  + +V+W  +I GYG HG A EA+ LF KM
Sbjct: 297 LQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKM 356

Query: 410 LLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
             D  V PD + ++ VLSAC+H G+VEE++E+F  + N   +KP ++HY+C++D LG  G
Sbjct: 357 KGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTG 416

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           R +EA +LI+ M ++P   IW  LL+ C++H ++ELG    + L+ L+ ++  NYV +SN
Sbjct: 417 RFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSN 476

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+A +G W +  R+RKL  ++GLKK+   SW+E+  + H F  GD +HP +++I+  L  
Sbjct: 477 IYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELER 536

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +E  M +  G+V  +    H++ ++ K   +R HSE+LAI   L+    +  PG  + V 
Sbjct: 537 LEGLMSDA-GYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLI----STPPGTKLLVT 591

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +S+I++   ++RD  R+H F  G CSC DYW
Sbjct: 592 KNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 215/436 (49%), Gaps = 16/436 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  +  L  G QLHG L+  G   D +L+  L+D+YA CG++  A  +FD M +RNV
Sbjct: 69  LQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNV 128

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  L+  + + G  +A + L+  M    V+P+ FT    +KA   L  +E G ++H  
Sbjct: 129 FLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQR 188

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              + +  +  V   ++DMY+KCG +++A  +FD +  +  + WN+MIA Y   G   + 
Sbjct: 189 VSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEA 248

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L R M  +G  P   T  S + A     ++  G ++HGF    GF   ++  +  SLV
Sbjct: 249 LALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGF--GLQDKLKTSLV 306

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDG 317
           D Y K G +  AR +F+ + ++ ++SW+++I GY    +  EA+ LF +++ +  +  D 
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDN 366

Query: 318 FVLSSMMGVFADFALVEQGKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
                ++       +VE+ K+     ++AY+ K P+         ++D+    G  +EA 
Sbjct: 367 ITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIK-PT---VQHYTCVIDVLGHTGRFEEAY 422

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
           +L   M ++ +   W  ++ G   H   +      +K++  ++EP D   Y+ + +  + 
Sbjct: 423 DLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLI--ELEPEDAGNYVHLSNIYAQ 480

Query: 431 SGLVEESQEYFSRLCN 446
           SG  E++      + N
Sbjct: 481 SGKWEKAARVRKLMTN 496


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/716 (32%), Positives = 378/716 (52%), Gaps = 77/716 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSS 107
             L+  +A  G +  A A FD +    R+ V   A+M  F +   A   +S+F   +GS 
Sbjct: 98  TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157

Query: 108 SVKPNEFTLSTNIKASGVLSSV--ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC---- 161
           S++P++++ +  I A G + ++   +  Q+H   +KSG      V N++I +Y KC    
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217

Query: 162 ------------------------------GRINEAARMFDVMPAKSLITWNAMIAGYVL 191
                                         G +N A  +F+ +  K  + WNAMI+GYV 
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI--TSGFPYSV 249
           +G       LFR+M       DEFTFTS L AC + G    G  +HG +I     F    
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 337

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME------ 303
              +  +LV  Y K G +V A+R+FD +  K V+SW++++ GY     L +A+E      
Sbjct: 338 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 397

Query: 304 -------------------------LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
                                    LF Q+R   ++   +  +  +    +   ++ G+Q
Sbjct: 398 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 457

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +HA+  +       S  N+++ MY KCG +++A  +F  MP  + V+W  +I+  G+HG 
Sbjct: 458 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 517

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            +EA+ LF +M+ + ++PD +++L +L+AC+H+GLV+E   YF  +  D  + P  +HY+
Sbjct: 518 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 577

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
            ++D LGR+GR+ EA++LI++MP +P+ +IW+ +LS CR +GD+E G    + L R+   
Sbjct: 578 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 637

Query: 519 NPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPL 578
           +   Y+++SN ++ AG W +  R+RKL R +G+KK  G SW+EV  +IH F  GD  HP 
Sbjct: 638 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 697

Query: 579 TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN 638
            ++++Q L  +  RM+ +LG+V   K+ LHD++   KE  L  HSEKLA+G  L    L 
Sbjct: 698 AQEVYQFLEVIGARMR-KLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGL----LK 752

Query: 639 EQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             PG  + V KNLR+CGDCH  +  +SK +    VVRD  RFH F+ G CSCG+YW
Sbjct: 753 LPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 201/446 (45%), Gaps = 77/446 (17%)

Query: 25  NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------------------------ 60
           NL   +  QLH +++K G +  L ++N LI +Y KC                        
Sbjct: 178 NLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTW 237

Query: 61  ----------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
                     G++N A +VF+++  +  V W A++ G++Q+G       LF +M S  V 
Sbjct: 238 TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVP 297

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINE 166
            +EFT ++ + A        +G  +HG  ++    + P     V N+++ +YSK G+I  
Sbjct: 298 LDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVI 357

Query: 167 AARMFD-------------------------------VMPAKSLITWNAMIAGYVLAGYS 195
           A R+FD                               VMP K+ ++W  M++GYV  G S
Sbjct: 358 AKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLS 417

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +  L LF +M+     P ++T+   + ACG LG++  G Q+H  L+  GF  S       
Sbjct: 418 EDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS--NSAGN 475

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+  Y KCG + +AR VF ++     +SW+++I    Q  +  EA+ELF Q+    +  
Sbjct: 476 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 535

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAA-KVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
           D     +++       LV++G   H + + K   G+     +   ++D+  + G I EA 
Sbjct: 536 DRISFLTILTACNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEAR 593

Query: 373 ELFNEMPVKNVVT-WTVIITGYGKHG 397
           +L   MP +   + W  I++G   +G
Sbjct: 594 DLIKTMPFEPTPSIWEAILSGCRTNG 619



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 204/461 (44%), Gaps = 81/461 (17%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWN 183
           L ++   +       +S  +  PV   S++  ++  GR+ +AA  FD +P   +  +  N
Sbjct: 72  LYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHN 131

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGG--TQIHGFL 240
           AM++ +  A  +   + +F  +   G + PD+++FT+ + A G + ++     TQ+H  +
Sbjct: 132 AMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSV 191

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKC----------------------------------GC 266
           + SG   +    ++ +L+  Y+KC                                  G 
Sbjct: 192 LKSG--AAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGD 249

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR VF+ ++ K  + W+++I GY Q    A+A ELFR++    + +D F  +S++  
Sbjct: 250 VNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSA 309

Query: 327 FADFALVEQGKQIHAY------------AAKVPSGLDTSVS------------------- 355
            A+      GK +H              A  V + L T  S                   
Sbjct: 310 CANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKD 369

Query: 356 ----NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
               N+I+  Y+  G +D+A E+F  MP KN ++W V+++GY   GL+++A+ LF +M  
Sbjct: 370 VVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRA 429

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
           +DV+P    Y   ++AC   G ++  ++  + L      +      + ++    + G ++
Sbjct: 430 EDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCG-FEASNSAGNALLTMYAKCGAVN 488

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           +A+ +   MP   S++ W  ++SA   HG    GRE  E+ 
Sbjct: 489 DARLVFLVMPNLDSVS-WNAMISALGQHGH---GREALELF 525



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 158/333 (47%), Gaps = 43/333 (12%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF----DLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  C+      +G  +HG ++++  +F     L +NN L+ +Y+K G++  A  +FD M 
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366

Query: 75  ERNVVSWTALMCGFLQNGN-------------------------------AKACLSLFCQ 103
            ++VVSW  ++ G++ +G                                ++  L LF Q
Sbjct: 367 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 426

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M +  VKP ++T +  I A G L ++++G Q+H   ++ GFE +   GN+++ MY+KCG 
Sbjct: 427 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 486

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +N+A  +F VMP    ++WNAMI+     G+  + L LF +M   G  PD  +F + L A
Sbjct: 487 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 546

Query: 224 CGSLGSVGGGTQIHGF-LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           C   G V  G   H F  +   F  S        L+D   + G + EAR +   +  +  
Sbjct: 547 CNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 604

Query: 283 IS-WSSLILGYAQEENLA----EAMELFRQLRE 310
            S W +++ G     ++      A +LFR + +
Sbjct: 605 PSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 637



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 8/200 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  C +   L +G QLH  LV+ GF       N L+ MYAKCG +N A  VF  M  
Sbjct: 440 AGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN 499

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+ +  L LF QM +  + P+  +  T + A      V+ G   
Sbjct: 500 LDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH- 558

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLA 192
           +   MK  F  +P   +   +ID+  + GRI EA  +   MP +   + W A+++G    
Sbjct: 559 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 618

Query: 193 GYSDKGLL----LFRKMQEH 208
           G  + G      LFR + +H
Sbjct: 619 GDMEFGAYAADQLFRMIPQH 638


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/664 (34%), Positives = 368/664 (55%), Gaps = 11/664 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H  +VK+G   +  + N L+D Y K G ++ A  +F +M   + VS+  ++ G+  NG
Sbjct: 161 QAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNG 220

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + LF +M +   KP++FT +  I AS  L     G QIHG  +K+ F  N  VGN
Sbjct: 221 LNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGN 280

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           + +D YSK   +NE  ++F+ MP    +++N +I  Y   G   + + LF+++Q      
Sbjct: 281 AFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDR 340

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
             F F + L    S   +  G Q+H  ++ S      +  ++ SLVD Y KCG   EA R
Sbjct: 341 KNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR--VSNSLVDMYAKCGKFEEADR 398

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  +  +S + W+++I    Q       ++LF ++R  ++  D    + ++   A+ A 
Sbjct: 399 IFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLAS 458

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSN-SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           +  GKQ+H+    + SG     S  +++DMY  C  I +A + F EM  +NVVTW  +++
Sbjct: 459 ILLGKQLHSCV--IRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLS 516

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y ++G  K  +  F +M++   +PD V++L +L+ACSH  LVEE  +YF+ +     + 
Sbjct: 517 AYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLA 576

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P+ EHY+ +VD+L R+GR DEA+ L+  MP +P   +W ++L++CR+H +  L R+    
Sbjct: 577 PKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQ 636

Query: 512 LLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           L  +    +   YV MSNI A+AG W+   +++K  R +G++K+   SWVE+  ++H F 
Sbjct: 637 LFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFS 696

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
             DD HP   +I + +  + ++M++E G+   +  A  ++ +ESK +SL+ HSE+LAI  
Sbjct: 697 ANDDKHPQQLEILRKIEMLAEQMEKE-GYDPDISCAHQNVDKESKIDSLKYHSERLAIAF 755

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL+    N   G  I V KNLR C DCH  IK +SKI+     VRD+ RFH F  G CSC
Sbjct: 756 ALI----NTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSC 811

Query: 691 GDYW 694
           GDYW
Sbjct: 812 GDYW 815



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 225/462 (48%), Gaps = 10/462 (2%)

Query: 40  KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLS 99
           +  FS D+     +I  Y K G +  A  +FD   ER VV+WT ++  + ++        
Sbjct: 72  RNSFSIDI-----IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFK 126

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           LF +M  S  +P+  T  T +     L   +   Q H   +K G   N  V N+++D Y 
Sbjct: 127 LFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYF 186

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           K G ++ A R+F  M     +++N MI GY   G +++ + LF +MQ  G  P +FTF +
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            + A   L     G QIHGF++ + F  +V   +  + +DFY K  C+ E R++F+ + +
Sbjct: 247 VISASVGLDDTAFGQQIHGFVVKTSFIRNV--FVGNAFLDFYSKHDCVNEVRKLFNEMPE 304

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
              +S++ +I  YA    + E+++LF++L+  +     F   +M+ + A    ++ G+Q+
Sbjct: 305 LDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQL 364

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           HA      +  D  VSNS+VDMY KCG  +EA  +F  +  ++ V WT +I+   + GL 
Sbjct: 365 HAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH 424

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           +  + LF +M   +V  D   +  VL A ++   +   ++  S +     M   +     
Sbjct: 425 ENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMN--VYSGCA 482

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           ++D       + +A    E M  + ++  W  LLSA   +GD
Sbjct: 483 LLDMYANCASIKDAIKTFEEMSER-NVVTWNALLSAYAQNGD 523



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 199/394 (50%), Gaps = 11/394 (2%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q+HG +VK  F  ++ + N  +D Y+K   +N    +F++M E + VS+  ++  + 
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
             G  K  + LF ++  ++     F   T +  +     ++ G Q+H   + S  + +  
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS++DMY+KCG+  EA R+F  + ++S + W AMI+  V  G  + GL LF +M+   
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SLVDFYVKCGCLV 268
              D+ TF   LKA  +L S+  G Q+H  +I SGF      V +G +L+D Y  C  + 
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGF----MNVYSGCALLDMYANCASIK 494

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A + F+ + +++V++W++L+  YAQ  +    ++ F ++     Q D      ++   +
Sbjct: 495 DAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACS 554

Query: 329 DFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
              LVE+G K  +  +             ++VD   + G  DEA +L  +MP + + + W
Sbjct: 555 HCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVW 614

Query: 387 TVIITG---YGKHGLAKEAVG-LFRKMLLDDVEP 416
           T ++     +  + LA++A G LF   +L D  P
Sbjct: 615 TSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAP 648



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 155/313 (49%), Gaps = 5/313 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L   + +L L  G QLH  +V      D  ++N L+DMYAKCG+   A  +F ++  R+ 
Sbjct: 349 LSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRST 408

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V WTA++   +Q G  +  L LF +M  ++V  ++ T +  +KAS  L+S+  G Q+H  
Sbjct: 409 VPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSC 468

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SGF  N   G +++DMY+ C  I +A + F+ M  ++++TWNA+++ Y   G     
Sbjct: 469 VIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGT 527

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG-FPYSVKTVIAGSL 257
           L  F +M   G  PD  +F   L AC     V  G +   F   SG +  + K     ++
Sbjct: 528 LKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKY--FNDMSGVYNLAPKREHYTAM 585

Query: 258 VDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           VD   + G   EA ++   +  +   I W+S++      +N A A +   QL    +  D
Sbjct: 586 VDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRD 645

Query: 317 GFVLSSMMGVFAD 329
                +M  +FA+
Sbjct: 646 AAPYVTMSNIFAE 658


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/637 (35%), Positives = 359/637 (56%), Gaps = 48/637 (7%)

Query: 98  LSLFCQMGSSS---------VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
           + LFCQ               +P+    ST I A      +E G ++H     S F    
Sbjct: 39  IELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGI 98

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------------------- 189
           V+ N +I MY+KCG + +A  +FD +P K L +WN MI+GY                   
Sbjct: 99  VISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR 158

Query: 190 -------VLAGYSDKG-----LLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQI 236
                  V++GY  +G     L LFR MQE+     + FT +S L A  ++ S+  G +I
Sbjct: 159 DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEI 218

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG+LI SG    +  V+  +L+D Y KCG L EAR +FD +  K ++SW+++I    ++ 
Sbjct: 219 HGYLIRSGL--ELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDG 276

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              E   LFR L    ++ + +  + ++   AD A  + GK++H Y  +V     +  ++
Sbjct: 277 RKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAAS 336

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           ++V +Y KCG  + A  +FN+MP  ++V+WT +I GY ++G    A+  F  +L    +P
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKP 396

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           D + ++ VLSAC+H+GLV+   EYF  +     +    +HY+C++D L R+GR  EA+N+
Sbjct: 397 DEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENI 456

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I++MP+KP   +W +LL  CR+HG++EL     + L  L+ +NP  Y+ +SNI+A+AG W
Sbjct: 457 IDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLW 516

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            E  ++R    ++G+ K  G+SW+E+ +++H F  GD +HP    IH+ L E+ K+MKEE
Sbjct: 517 TEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEE 576

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
            G+V    + LHD++EE KE+++  HSEKLA+   ++    +  PG  I+VFKNLR C D
Sbjct: 577 -GYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGII----STSPGTPIKVFKNLRTCVD 631

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           CH  +K +SKI++   +VRD+ RFH F  G CSC DY
Sbjct: 632 CHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 211/416 (50%), Gaps = 24/416 (5%)

Query: 36  GALVKMGFSFDLMLNNDL------IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G+LV     FD +   DL      I  YA  G +  A  +FD+M  R+  SW A++ G++
Sbjct: 112 GSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYV 171

Query: 90  QNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             G     L LF  M  + S   N FTLS+ + A+  +SS+  G +IHG  ++SG E + 
Sbjct: 172 SQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDE 231

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           VV  +++D+Y KCG +NEA  +FD M  K +++W  MI      G   +G  LFR +   
Sbjct: 232 VVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGS 291

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCL 267
           G  P+E+TF   L AC  L +   G ++HG++   G+ P+S     A +LV  Y KCG  
Sbjct: 292 GVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA---ASALVHVYSKCGNT 348

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             ARRVF+ + +  ++SW+SLI+GYAQ      A++ F  L     + D      ++   
Sbjct: 349 ETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSAC 408

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
               LV+ G + + ++ K   GL  +  +   ++D+  + G   EA  + + MP+K +  
Sbjct: 409 THAGLVDIGLE-YFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKF 467

Query: 385 TWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEE 436
            W  ++ G   HG   LA+ A        L ++EP+  A Y+ + +  +++GL  E
Sbjct: 468 LWASLLGGCRIHGNIELAERAA-----KALFELEPENPATYITLSNIYANAGLWTE 518



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 4/263 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++HG L++ G   D ++   L+D+Y KCG +N A  +FD+M ++++VSWT ++    +
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G  K   SLF  +  S V+PNE+T +  + A   L++ + G ++HG   + G++     
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++++ +YSKCG    A R+F+ MP   L++W ++I GY   G  D  L  F  +   G 
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
            PDE TF   L AC   G V  G +  H      G  ++        ++D   + G   E
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHY--ACVIDLLARSGRFKE 452

Query: 270 ARRVFDLIEQKS-VISWSSLILG 291
           A  + D +  K     W+SL+ G
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGG 475


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/631 (35%), Positives = 361/631 (57%), Gaps = 9/631 (1%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASG 124
           A +VF      +V++W +++  F+ +   +  L  + +M   S   P+ FT  + +K   
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           +L   + G  +HG  +K     +  +  ++++MY+ CG +  A  +F+ M  ++ + W +
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI+GY+     ++ LLL++KM+E G  PDE T  + + AC  L  +G G ++H  +    
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI--RE 208

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               +  V+  +LV+ Y KCG L  AR+VFD +  K V +WS+LI GY +     EA++L
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268

Query: 305 FRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           FR++   S ++ +   + +++   A    +E G+ +H Y  +   G   S++NS++DM+ 
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG ID A  +F+ M  K++++W  ++ G   HGL +EA+  F  M   D++PD + ++ 
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIG 388

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VL+ACSH+GLV+E ++ F  +     ++ + EHY C+VD L RAG L EA+  I  MP++
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P  AIW ++L ACRV+ +LELG E    LL L+  N   Y+++SNI+A    WNE +++R
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVR 508

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
           +L   KG++K  G S V +D   H F  GD +HP   +I  +L ++ +++K  +G+V   
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK-LVGYVADT 567

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
              L +I +  KEES+  HSEK    LAL  G L  + G  I + KNLRVC DCH  IK 
Sbjct: 568 SEVLLNIDDNKKEESVSQHSEK----LALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKL 623

Query: 664 LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +SKI +    +RD  RFH F+ G CSC DYW
Sbjct: 624 VSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 197/375 (52%), Gaps = 4/375 (1%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           V +R      L+ C+  L    G  LHG +VK     DL +   L++MYA CG++  A  
Sbjct: 76  VPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARF 135

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F++M  RN V WT+++ G+++N      L L+ +M      P+E T++T + A   L  
Sbjct: 136 LFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD 195

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +  GM++H    +   +   V+G+++++MY+KCG +  A ++FD +  K +  W+A+I G
Sbjct: 196 LGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFG 255

Query: 189 YVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           YV    S + L LFR++     + P+E T  + + AC  LG +  G  +H ++  +   +
Sbjct: 256 YVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGH 315

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           SV   +  SL+D + KCG +  A+R+FD +  K +ISW+S++ G A      EA+  F  
Sbjct: 316 SVS--LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHL 373

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           ++   LQ D      ++   +   LV++GK++ +   A     L +     +VD+  + G
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433

Query: 367 LIDEATELFNEMPVK 381
           L+ EA E    MP++
Sbjct: 434 LLAEAREFIRVMPLQ 448


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/632 (36%), Positives = 360/632 (56%), Gaps = 24/632 (3%)

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           +W++++  +  +       S F  M S SV PN     + +KAS +L   +    +H   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 140 MKSGFEWNPVVGNSIIDMYSK---CGR------------INEAARMFDVMPAKSLITWNA 184
           ++ G + +  + N++I+ Y+K    G+            I+   ++FD+MP + +++WN 
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +IAG+   G   + L + R+M ++G++ PD FT +S L        V  G +IHG+ + +
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           GF   V   I  SL+D Y KC  L  + R F ++ +K  ISW+S+I G  Q       + 
Sbjct: 257 GFDGDV--FIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLG 314

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            FR++ + +++      SS++   A    +  G+Q+H    ++    +  +++S+VDMY 
Sbjct: 315 FFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYA 374

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG I  A  +F+ +  +++V WT II G   HG A +AV LF  ML D V P  VA++A
Sbjct: 375 KCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMA 434

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-V 482
           VL+ACSH+GLV+E   YF+ +  D  + P +EHY+ + D LGRAGRL+EA + I +M  V
Sbjct: 435 VLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGV 494

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +P+ ++W  LL+ACR H  +EL  +V + LL +D +N   YV+MSNI++ A  W +  RL
Sbjct: 495 QPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARL 554

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
           R   R KGLKK    SW+EV  ++H F  GD +HP  +KI++ L  + ++M++E G+V  
Sbjct: 555 RIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKE-GYVID 613

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
               LHD+ EE K E L  HSE+LAI   ++    +   G  IRV KN+RVC DCH  IK
Sbjct: 614 TNQVLHDVDEELKRELLHNHSERLAIAYGII----STTAGTTIRVIKNIRVCADCHTAIK 669

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            ++KI+     VRD +RFH F+ G CSCGDYW
Sbjct: 670 FITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 223/426 (52%), Gaps = 18/426 (4%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S + +  +LA SL  C+  L LD  + +  AL+     F       + D++ K GE    
Sbjct: 120 STLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNA--GKVFDVFPKRGESGID 177

Query: 67  CA--VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKAS 123
           C   VFD M  R+VVSW  ++ GF QNG     L +  +MG +  +KP+ FTLS+ +   
Sbjct: 178 CVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIF 237

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
                V  G +IHG  +++GF+ +  +G+S+IDMY+KC R+  + R F ++P K  I+WN
Sbjct: 238 AEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWN 297

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           ++IAG V  G  D+GL  FR+M +    P   +F+S + AC  L ++  G Q+HG ++  
Sbjct: 298 SIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRL 357

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           GF  +    IA SLVD Y KCG +  AR VFD I+++ +++W+++I+G A   +  +A+ 
Sbjct: 358 GFDDN--EFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVS 415

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVD 360
           LF  + E  ++       +++   +   LV++G +      +   +  GL+     ++ D
Sbjct: 416 LFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYA--AVAD 473

Query: 361 MYLKCGLIDEATELFNEM----PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +  + G ++EA +  + M    P  +V  W++++     H   + A  +  K+L  D E 
Sbjct: 474 LLGRAGRLEEAYDFISNMRGVQPTGSV--WSILLAACRAHKSVELAEKVLDKLLSVDSEN 531

Query: 417 DGVAYL 422
            G   L
Sbjct: 532 MGAYVL 537



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 27/342 (7%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   ++++ ++ G ++HG  V+ GF  D+ + + LIDMYAKC  +  +   F  + 
Sbjct: 230 LSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP 289

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ +SW +++ G +QNG     L  F +M   +VKP   + S+ I A   L+++  G Q
Sbjct: 290 RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQ 349

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  ++ GF+ N  + +S++DMY+KCG I  A  +FD +  + ++ W A+I G  + G+
Sbjct: 350 LHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGH 409

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSV 249
           +   + LF  M E G  P    F + L AC   G V  G +        F I  G  +  
Sbjct: 410 ALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEH-- 467

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIE-----QKSVISWSSLILGYAQEENLAEAMEL 304
                 ++ D   + G L EA   +D I      Q +   WS L+          +++EL
Sbjct: 468 ----YAAVADLLGRAGRLEEA---YDFISNMRGVQPTGSVWSILLAACRAH----KSVEL 516

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
             ++ ++ L VD    S  MG +   + +    Q    AA++
Sbjct: 517 AEKVLDKLLSVD----SENMGAYVLMSNIYSAAQRWKDAARL 554


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/619 (35%), Positives = 358/619 (57%), Gaps = 21/619 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+    + GN K  L L     S    P + T    I ++   +S+ + + +H + +  G
Sbjct: 44  LIQSLCKQGNLKQALYLL----SHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGG 99

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +P +   +I+M+S+   ++ A ++FD    +++  WNA+     LAG  +  L L+ 
Sbjct: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYP 159

Query: 204 KMQEHGEIPDEFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +M   G   D FT+T  LKAC +    +  +  G +IH  ++  G  Y     +  +L+D
Sbjct: 160 RMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHG--YGAHVHVMTTLMD 217

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ--LRERSLQVDG 317
            Y + GC+  A  VFD +  K+V+SWS++I  YA+     EA+ELFR+  L       + 
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELF 375
             + S++   A FA +EQGK IHAY  +   GLD+   V ++++ MY +CG ++    +F
Sbjct: 278 VTMVSVLQACAAFAALEQGKLIHAYILR--RGLDSILPVISALITMYARCGKLESGQLIF 335

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  K+VV W  +I+ YG HG  ++A+ +F +M+     P  +++++VL ACSH+GLVE
Sbjct: 336 DRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVE 395

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E ++ F  +  +  ++P +EHY+C+VD LGRA RLDEA  +IE + ++P   +W +LL A
Sbjct: 396 EGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGA 455

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+H  +EL     + L +L+  N  NYV++++I+A+A  W+E +R++KL  S+ L+KV 
Sbjct: 456 CRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVP 515

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           GRSW+EV ++I+ F   D+ +P  E++H +L+ +   MK+  G+    K  L+D+ +E K
Sbjct: 516 GRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQR-GYTPQTKLVLYDLDQEEK 574

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  +  HSEKLA+   L+    N   G  IR+ KNLR+C DCH   K +SK      +VR
Sbjct: 575 ERIVLGHSEKLAVAFGLI----NTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F+ GVCSCGDYW
Sbjct: 631 DLNRFHHFKDGVCSCGDYW 649



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 192/371 (51%), Gaps = 12/371 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L    +N L D  + +H  LV  GF  D  L   LI+M+++   ++ A  VFDK  +R +
Sbjct: 77  LSAARRNSLSD-ALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTI 135

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQ 134
             W AL       G     L L+ +M    V  + FT +  +KA      ++S ++ G +
Sbjct: 136 YVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKE 195

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G+  +  V  +++DMY++ G ++ A+ +FD MP K++++W+AMIA Y   G 
Sbjct: 196 IHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGK 255

Query: 195 SDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             + L LFR+M    H  +P+  T  S L+AC +  ++  G  IH +++  G   S+  V
Sbjct: 256 PYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLD-SILPV 314

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           I+ +L+  Y +CG L   + +FD + +K V+ W+SLI  Y       +A+++F ++ +  
Sbjct: 315 IS-ALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHG 373

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
                    S++G  +   LVE+GK++     K   G+  SV +   +VD+  +   +DE
Sbjct: 374 FSPSHISFISVLGACSHTGLVEEGKKLFESMVK-EHGIQPSVEHYACMVDLLGRANRLDE 432

Query: 371 ATELFNEMPVK 381
           A ++  ++ ++
Sbjct: 433 AAKIIEDLRIE 443



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 6/267 (2%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
            L  G ++H  +++ G+   + +   L+DMYA+ G ++ A AVFD+M  +NVVSW+A++ 
Sbjct: 189 FLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIA 248

Query: 87  GFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
            + +NG     L LF +M   +    PN  T+ + ++A    +++E G  IH   ++ G 
Sbjct: 249 CYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGL 308

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           +    V +++I MY++CG++     +FD M  K ++ WN++I+ Y L GY  K + +F +
Sbjct: 309 DSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEE 368

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS-GFPYSVKTVIAGSLVDFYVK 263
           M +HG  P   +F S L AC   G V  G ++   ++   G   SV+      +VD   +
Sbjct: 369 MIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHY--ACMVDLLGR 426

Query: 264 CGCLVEARRVF-DLIEQKSVISWSSLI 289
              L EA ++  DL  +     W SL+
Sbjct: 427 ANRLDEAAKIIEDLRIEPGPKVWGSLL 453


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/593 (36%), Positives = 346/593 (58%), Gaps = 10/593 (1%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  S   PN+FT S+ + AS     V +G Q+H +  K GF+ N  VG +++DMY+KC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTLK 222
           ++ A R+FD MP ++L++WN+MI G+      D+ + +F+  ++E   IP+E + +S L 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 223 ACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           AC ++G +  G Q+HG ++  G  P    T +  SL+D Y KC    E  ++F  +  + 
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPL---TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRD 177

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           V++W+ L++G+ Q +   EA   F  +R   +  D    S+++   A  A + QG  IH 
Sbjct: 178 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHD 237

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
              K+    +  +  S++ MY KCG + +A ++F  +   NV++WT +I+ Y  HG A +
Sbjct: 238 QIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQ 297

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            + LF  ML + +EP  V ++ VLSACSH+G VEE   +F+ +     M P  EHY+C+V
Sbjct: 298 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMV 357

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGRAG LDEAK  IESMP+KP+ ++W  LL ACR +G+L++GRE  E L  ++  NP 
Sbjct: 358 DLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPG 417

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
           NYV+++N+   +G   E   +R+L    G++K  G SW++V      F   D +H  +++
Sbjct: 418 NYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDE 477

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I++ ++E  +++ ++ G+V   ++  + ++E  +E+ L  HSEKLA+   L+   ++   
Sbjct: 478 IYK-MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSP- 535

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              IR+ KNLR CG CH  +K  SKI     +VRD  RFHRF  G CSCGDYW
Sbjct: 536 ---IRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 219/428 (51%), Gaps = 14/428 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L   +  +++ +G QLH  + K GF  ++ +   L+DMYAKC +M+ A  VFD+M ERN+
Sbjct: 17  LSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNL 76

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQ-MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++ GF  N      + +F   +   +V PNE ++S+ + A   +  +  G Q+HG
Sbjct: 77  VSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHG 136

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K G      V NS++DMY KC   +E  ++F  +  + ++TWN ++ G+V     ++
Sbjct: 137 VVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEE 196

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
               F  M+  G +PDE +F++ L +  SL ++  GT IH  +I  G  Y     I GSL
Sbjct: 197 ACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG--YVKNMCILGSL 254

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG LV+A +VF+ IE  +VISW+++I  Y       + +ELF  +    ++   
Sbjct: 255 ITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSH 314

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
                ++   +    VE+G   H  + K    ++    +   +VD+  + G +DEA    
Sbjct: 315 VTFVCVLSACSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFI 373

Query: 376 NEMPVKNVVT-WTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             MP+K   + W  ++     YG   + +EA    R   ++   P    Y+ + + C+ S
Sbjct: 374 ESMPMKPTPSVWGALLGACRKYGNLKMGREAAE--RLFEMEPYNPGN--YVLLANMCTRS 429

Query: 432 GLVEESQE 439
           G +EE+ E
Sbjct: 430 GRLEEANE 437



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +++     ++  L  C+    L++G Q+HG +VK G      + N L+DMY KC   +  
Sbjct: 107 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEG 166

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + +R+VV+W  L+ GF+QN   +   + F  M    + P+E + ST + +S  L
Sbjct: 167 VKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASL 226

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +++  G  IH   +K G+  N  +  S+I MY+KCG + +A ++F+ +   ++I+W AMI
Sbjct: 227 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMI 286

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           + Y L G +++ + LF  M   G  P   TF   L AC   G V  G   H   +     
Sbjct: 287 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIHD 345

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELF 305
            +        +VD   + G L EA+R  + +  K   S W +L+    +  NL    ++ 
Sbjct: 346 MNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL----KMG 401

Query: 306 RQLRERSLQVDGF 318
           R+  ER  +++ +
Sbjct: 402 REAAERLFEMEPY 414


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 340/569 (59%), Gaps = 2/569 (0%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C+  + + +G  LHG  VK G    + +++ LIDMY K G++   C VF+KM+ RN
Sbjct: 130 ALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRN 189

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWTA++ G +  G     L  F +M  S V  +  T +  +KAS   S + +G  IH 
Sbjct: 190 VVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHT 249

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K GF+ +  V N++  MY+KCG+ +   R+F+ M    +++W  +I+ YV  G  + 
Sbjct: 250 QTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEH 309

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +  F++M++    P+++TF + + +C +L +   G QIHG ++  G   ++   +A S+
Sbjct: 310 AVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS--VANSI 367

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG L  A  VF  I +K +ISWS++I  Y+Q     EA +    +R    + + 
Sbjct: 368 ITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNE 427

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F LSS++ V    AL+EQGKQ+HA+   +    +  V ++I+ MY KCG + EA+++FN 
Sbjct: 428 FALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNG 487

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M + ++++WT +I GY +HG ++EA+ LF K+    ++PD V ++ VL+AC+H+G+V+  
Sbjct: 488 MKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLG 547

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             YF  + N  R+ P  EHY C++D L RAGRL EA+++I SMP      +W TLL ACR
Sbjct: 548 FYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACR 607

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           VHGD++ GR   E LL+LD ++   ++ ++NI+A  G W E   +RKL +SKG+ K  G 
Sbjct: 608 VHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGW 667

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SWV V+ +++ F  GD  HP +E I  VL
Sbjct: 668 SWVNVNDQLNAFVAGDQAHPQSEHITTVL 696



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 257/507 (50%), Gaps = 22/507 (4%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
            RV+   +S R  L  +   C +  L+   +Q   A         L LN++L  +  K G
Sbjct: 15  TRVALHYISNRYILTGTATECRE--LIQQPIQEQPAENAYSVHNMLELNSELKQL-VKQG 71

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP----NEFTLS 117
           ++  A  +FDKM  R+ +SWT L+ G++   ++   L LF  M    V P    ++F +S
Sbjct: 72  QLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW---VHPGPQRDQFMIS 128

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
             +KA  +  ++  G  +HG  +KSG   +  V +++IDMY K G+I +  R+F+ M  +
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           ++++W A+IAG V AGY+ +GLL F +M       D  TF   LKA      +  G  IH
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
              I  GF  S  + +  +L   Y KCG      R+F+ +    V+SW++LI  Y Q   
Sbjct: 249 TQTIKQGFDES--SFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE 306

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
              A+E F+++R+  +  + +  ++++   A+ A  + G+QIH +  ++      SV+NS
Sbjct: 307 EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANS 366

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           I+ +Y KCGL+  A+ +F+ +  K++++W+ II+ Y + G AKEA      M  +  +P+
Sbjct: 367 IITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPN 426

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH----YSCIVDSLGRAGRLDEA 473
             A  +VLS C    L+E+ ++  + L     +   I+H    +S I+    + G + EA
Sbjct: 427 EFALSSVLSVCGSMALLEQGKQVHAHL-----LCIGIDHEAMVHSAIISMYSKCGSVQEA 481

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHG 500
             +   M +   I+ W  +++    HG
Sbjct: 482 SKIFNGMKINDIIS-WTAMINGYAEHG 507



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 198/392 (50%), Gaps = 10/392 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +    A +L+  + + LL +G  +H   +K GF     + N L  MY KCG+ +    +F
Sbjct: 224 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLF 283

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           +KM   +VVSWT L+  ++Q G  +  +  F +M  S V PN++T +  I +   L++ +
Sbjct: 284 EKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAK 343

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIHG  ++ G      V NSII +YSKCG +  A+ +F  +  K +I+W+ +I+ Y 
Sbjct: 344 WGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYS 403

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             GY+ +       M+  G  P+EF  +S L  CGS+  +  G Q+H  L+  G  +  +
Sbjct: 404 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDH--E 461

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            ++  +++  Y KCG + EA ++F+ ++   +ISW+++I GYA+     EA+ LF ++  
Sbjct: 462 AMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISS 521

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCG 366
             L+ D  +   ++       +V+ G     Y   + +    S S      ++D+  + G
Sbjct: 522 VGLKPDYVMFIGVLTACNHAGMVDLG---FYYFMLMTNVYRISPSKEHYGCLIDLLCRAG 578

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
            + EA  +   MP   + V W+ ++     HG
Sbjct: 579 RLSEAEHIIRSMPFHTDDVVWSTLLRACRVHG 610



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 99/187 (52%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C    LL+ G Q+H  L+ +G   + M+++ +I MY+KCG +  A  +F+ M 
Sbjct: 430 LSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             +++SWTA++ G+ ++G ++  ++LF ++ S  +KP+       + A      V+ G  
Sbjct: 490 INDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGF- 548

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
            + M M + +  +P   +   +ID+  + GR++EA  +   MP  +  + W+ ++    +
Sbjct: 549 YYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRV 608

Query: 192 AGYSDKG 198
            G  D+G
Sbjct: 609 HGDVDRG 615


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 375/657 (57%), Gaps = 26/657 (3%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI+ YAK   ++ A  VFD++ + ++VS+  L+  +   G     L LF ++    + 
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            + FTLS  I A G    V    Q+H   +  G +    V N+++  YS+ G ++EA R+
Sbjct: 139 LDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196

Query: 171 FDVMP---AKSLITWNAMIAGYVLAGYSDKGLL---LFRKMQEHGEIPDEFTFTSTLKAC 224
           F  M     +  ++WNAMI   V  G   +G+    LFR+M   G   D FT  S L A 
Sbjct: 197 FREMGEGGGRDEVSWNAMI---VACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAF 253

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVI 283
             +  + GG Q HG +I SGF     + +   L+D Y KC G +VE R+VF+ I    ++
Sbjct: 254 TCVKDLVGGRQFHGMMIKSGF--HGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLV 311

Query: 284 SWSSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
            W+++I G++  E+L+E  +  FR+++    + D      +    ++ +    GKQ+HA 
Sbjct: 312 LWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHAL 371

Query: 343 AAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           A K  VP     SV+N++V MY KCG + +A  +F+ MP  N V+   +I GY +HG+  
Sbjct: 372 AIKSDVPYN-RVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           E++ LF  ML  D+ P+ + ++AVLSAC H+G VEE Q+YF+ +     ++P  EHYSC+
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D LGRAG+L EA+ +IE+MP  P    W TLL ACR HG++EL  +     LRL+  N 
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             YVM+SN++A A  W E   +++L R +G+KK  G SW+E+DK++H F   D +HP+ +
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYAL---HDIQEESKEESLRVHSEKLAIGLALVRGGL 637
           +IH  + +M K+MK+  G+V  +++AL    +++ + +E  L  HSEKLA+   L+    
Sbjct: 611 EIHVYMGKMLKKMKQA-GYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLI---- 665

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           + + G  I V KNLR+CGDCH  +K +S +      VRD  RFH F+ G CSC DYW
Sbjct: 666 STEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 10/428 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE---RNVVSWTALMCGFL 89
           QLH  +V  G      +NN ++  Y++ G ++ A  VF +M E   R+ VSW A++    
Sbjct: 160 QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACG 219

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q+      + LF +M    +K + FT+++ + A   +  +  G Q HGM +KSGF  N  
Sbjct: 220 QHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSH 279

Query: 150 VGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYSDKGLLLFRKMQE 207
           VG+ +ID+YSKC G + E  ++F+ + A  L+ WN MI+G+ L    S+ GL  FR+MQ 
Sbjct: 280 VGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR 339

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           +G  PD+ +F     AC +L S   G Q+H   I S  PY+ +  +  +LV  Y KCG +
Sbjct: 340 NGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYN-RVSVNNALVAMYSKCGNV 398

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +ARRVFD + + + +S +S+I GYAQ     E++ LF  + E+ +  +     +++   
Sbjct: 399 HDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSAC 458

Query: 328 ADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
                VE+G K  +    +     +    + ++D+  + G + EA  +   MP     + 
Sbjct: 459 VHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIE 518

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  ++    KHG  + AV    + L   +EP   A   +LS    S    E      RL 
Sbjct: 519 WATLLGACRKHGNVELAVKAANEFL--RLEPYNAAPYVMLSNMYASAARWEEAATVKRLM 576

Query: 446 NDKRMKPR 453
            ++ +K +
Sbjct: 577 RERGVKKK 584



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/472 (22%), Positives = 214/472 (45%), Gaps = 42/472 (8%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA------ 168
           T    +KA      +  G  +H +  KS    +  + N    +YSKCG ++ A       
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 169 -------------------------RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
                                    R+FD +P   ++++N +IA Y   G     L LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +++E     D FT +  + ACG    VG   Q+H F++  G  +     +  +++  Y +
Sbjct: 131 EVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCG--HDCYASVNNAVLACYSR 186

Query: 264 CGCLVEARRVFDLIEQ---KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
            G L EARRVF  + +   +  +SW+++I+   Q     EA+ LFR++  R L+VD F +
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC-GLIDEATELFNEMP 379
           +S++  F     +  G+Q H    K     ++ V + ++D+Y KC G + E  ++F E+ 
Sbjct: 247 ASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT 306

Query: 380 VKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             ++V W  +I+G+  +  L+++ +  FR+M  +   PD  +++ V SACS+       +
Sbjct: 307 APDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGK 366

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +  +          R+   + +V    + G + +A+ + ++MP   ++++  ++++    
Sbjct: 367 QVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSL-NSMIAGYAQ 425

Query: 499 HGDLELGREVGEILLRLD-GDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           HG       + E++L  D   N + ++ + +     G   E ++   + + +
Sbjct: 426 HGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKER 477



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 161/323 (49%), Gaps = 10/323 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERNVVS 80
           C K+L+   G Q HG ++K GF  +  + + LID+Y+KC G M     VF+++   ++V 
Sbjct: 255 CVKDLV--GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVL 312

Query: 81  WTALMCGF-LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           W  ++ GF L    ++  L  F +M  +  +P++ +      A   LSS   G Q+H + 
Sbjct: 313 WNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALA 372

Query: 140 MKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           +KS   +N V V N+++ MYSKCG +++A R+FD MP  + ++ N+MIAGY   G   + 
Sbjct: 373 IKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVES 432

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M E    P+  TF + L AC   G V  G Q +  ++   F    +      ++
Sbjct: 433 LRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAEHYSCMI 491

Query: 259 DFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQ-LRERSLQVD 316
           D   + G L EA R+ + +      I W++L+    +  N+  A++   + LR       
Sbjct: 492 DLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAA 551

Query: 317 GFVLSSMMGVFADFALVEQGKQI 339
            +V+ S M  +A  A  E+   +
Sbjct: 552 PYVMLSNM--YASAARWEEAATV 572


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/669 (35%), Positives = 353/669 (52%), Gaps = 66/669 (9%)

Query: 35  HGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           HG +      FDL    D      ++  Y + G +  A  +F+   E +V+SW ALM G+
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFE 145
           +Q G       LF +M      P    +S NI  SG       VE         ++  F 
Sbjct: 204 VQWGKMSEARELFDRM------PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W  VV       Y++ G + EA R+FD MP ++ ++WNAM+A Y+     D+   LF  M
Sbjct: 258 WTAVVSG-----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
                             C ++ S                     T++ G     Y + G
Sbjct: 313 P-----------------CRNVASW-------------------NTMLTG-----YAQAG 331

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L EA+ VFD + QK  +SW++++  Y+Q     E ++LF ++      V+    + ++ 
Sbjct: 332 MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLS 391

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD A +E G Q+H    +   G+   V N+++ MY KCG +++A   F EM  ++VV+
Sbjct: 392 TCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVS 451

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY +HG  KEA+ +F  M     +PD +  + VL+ACSHSGLVE+   YF  + 
Sbjct: 452 WNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 511

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D  +  + EHY+C++D LGRAGRL EA +L++ MP +P   +W  LL A R+H + ELG
Sbjct: 512 HDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELG 571

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           R   E +  L+ +N   YV++SNI+A +G W +  ++R +   +G+KKV G SW+EV  +
Sbjct: 572 RSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNK 631

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  EKI+  L +++ RMK+  G+V      LHD++EE KE  L+ HSEK
Sbjct: 632 VHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA-GYVSATDMVLHDVEEEEKEHMLKYHSEK 690

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+      G LN  PG+ IRV KNLRVCGDCH   K +S I   + ++RD+ RFH F G
Sbjct: 691 LAVAY----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRG 746

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 747 GSCSCGDYW 755



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 32/349 (9%)

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +  N  I  + + GR+ +A R+F  MP +S  T+NAM+AGY   G       LFR +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              PD +++ + L A     S+     +   + +     Y+V       ++  +   G +
Sbjct: 98  ---PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-------MISSHANHGLV 147

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR  FDL  +K  +SW+ ++  Y +   + EA  LF    E     D    +++M  +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----WDVISWNALMSGY 203

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
             +  + + +++     ++P G D    N +V  Y + G + EA  LF+  PV++V TWT
Sbjct: 204 VQWGKMSEARELF---DRMP-GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL-CN 446
            +++GY ++G+ +EA  +F  M     E + V++ A+++A     +++E++E F+ + C 
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +      +  ++ ++    +AG L+EAK + ++MP K +++ W  +L+A
Sbjct: 316 N------VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-WAAMLAA 357



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 11/188 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR +F+ V         L  C+    L+ G+QLHG L++ G+     + N L+ MY KC
Sbjct: 381 VNRSAFACV---------LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 431

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A   F++M ER+VVSW  ++ G+ ++G  K  L +F  M ++S KP++ TL   +
Sbjct: 432 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 491

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A      VE G+   + M    G    P     +ID+  + GR+ EA  +   MP +  
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 180 IT-WNAMI 186
            T W A++
Sbjct: 552 STMWGALL 559



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 148/347 (42%), Gaps = 67/347 (19%)

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           + + +   +  +++ G + +A R+F  + ++S  ++++++ GY+    L  A  LFR + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 310 E----------RSLQV-----------------DGFVLSSMMGVFADFALVEQGKQIH-- 340
                       +L V                 D    + M+   A+  LV   +     
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156

Query: 341 -----------AYAAKVPSG--------------LDTSVSNSIVDMYLKCGLIDEATELF 375
                        AA V +G               D    N+++  Y++ G + EA ELF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + MP ++VV+W ++++GY + G   EA  LF    + DV      + AV+S  + +G++E
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLE 272

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E++  F  +     +      ++ +V +  +   +DEAK L   MP + ++A W T+L+ 
Sbjct: 273 EARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 326

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
               G LE  + V + + + D    V++  M   ++  G   E  +L
Sbjct: 327 YAQAGMLEEAKAVFDTMPQKDA---VSWAAMLAAYSQGGCSEETLQL 370


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/671 (34%), Positives = 387/671 (57%), Gaps = 16/671 (2%)

Query: 31   GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
            G ++HG +++ G     + L+N L++MYAKCG ++ A  VF  +  R+ VSW  ++    
Sbjct: 393  GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLD 452

Query: 90   QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            QNG  +  +  +C M    + P+ F   + + +   L  +  G Q+H   +K G + +  
Sbjct: 453  QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTS 512

Query: 150  VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD--KGLLLFRKMQE 207
            V N+++ MY  CG  +E+  +F+ M    +++WN+ I G +++ ++   + + +F  M  
Sbjct: 513  VSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS-IMGVMVSSHAPTAESVEVFSNMMR 571

Query: 208  HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
             G  P++ TF + L A   L  +  G Q+H  ++  G        +  +L+  Y K G +
Sbjct: 572  SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHG--AIEDNAVDNALMSCYAKSGDM 629

Query: 268  VEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
                ++F  +  ++  +SW+S+I GY    +L E M+    +   +  +D    S ++  
Sbjct: 630  DSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNA 689

Query: 327  FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             A  A +E+G ++HA+  +     D  V ++++DMY KCG ID A+++FN M  KN  +W
Sbjct: 690  CASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSW 749

Query: 387  TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
              +I+GY +HGL ++A+ +F +M  +   PD V +++VLSACSH+GLV+   +YF  +  
Sbjct: 750  NSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYF-EMME 808

Query: 447  DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD---LE 503
            D  + P IEHYSC++D LGRAG+L + +  I  MP+KP+  IW+T+L ACR   D   ++
Sbjct: 809  DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRID 868

Query: 504  LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
            LG+E   +LL L+  NPVNYV+ SN +A  G W +  + R       +KK AG+SWV + 
Sbjct: 869  LGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLG 928

Query: 564  KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
              +H F  GD +HP T++I++ L  + +++K   G+V   ++AL+D++EE+KEE L  HS
Sbjct: 929  DGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNA-GYVPMTEFALYDLEEENKEELLSYHS 987

Query: 624  EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
            EKLA+   L R   ++ P   IR+ KNLRVCGDCH   + +S+I+    ++RD+ RFH F
Sbjct: 988  EKLAVAFVLTRSS-SDVP---IRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHF 1043

Query: 684  EGGVCSCGDYW 694
            E G CSCGDYW
Sbjct: 1044 EDGKCSCGDYW 1054



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 273/568 (48%), Gaps = 67/568 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  LVK G + DL L+N L+++YAK   +  A  VFD MLERN VSWT L+ G++ +G
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 93  NAKACLSLFCQM---GSSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWN 147
                  +F  M   GS   +P  FT  + ++A        +   +Q+HG+  K+ +  N
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 148 PVVGNSIIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
             V N++I MY  C  G   +A ++FD  P + LITWNA+++ Y   GY      LF  M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 206 QEHGEI----PDEFTFTSTLKACGSLGSVGGGT--QIHGFLITSGFPYSVKTVIAGSLVD 259
                     P+E TF S + A  SL S   G   Q+   ++ SG   S    +  +LV 
Sbjct: 257 LHDDSAIELRPNEHTFGSLITAT-SLSSCSSGVLDQVFARVLKSG--SSSDLYVGSALVS 313

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGF 318
            + + G L EA+ +F  +++++ ++ + LI+G  ++    EA+ +F   R+   +  D F
Sbjct: 314 AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTF 373

Query: 319 VLSSMMGVFADFALVE----QGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATE 373
           V+  ++   A+F++ E    +G+++H +  +     L  ++SN +V+MY KCG ID+A+ 
Sbjct: 374 VV--LLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASR 431

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F  +  ++ V+W  II+   ++G  + A+  +  M    + P   A ++ LS+C+   L
Sbjct: 432 VFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRL 491

Query: 434 VEESQEYFSRLCNDKRMKPRIEH--YSCIVDSLGRAGRLDEAKNLIESM----------- 480
           +   Q+     C+  +    ++    + +V   G  G   E+  +  SM           
Sbjct: 492 LTAGQQVH---CDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSI 548

Query: 481 ---------PVKPSIAIWQ---------------TLLSACRVHGDLELGREVGEILLRLD 516
                    P   S+ ++                 LLSA      LELG++V  ++L+  
Sbjct: 549 MGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHG 608

Query: 517 G--DNPVNYVMMSNIHADAGSWNECERL 542
              DN V+  +MS  +A +G  + CE+L
Sbjct: 609 AIEDNAVDNALMS-CYAKSGDMDSCEQL 635



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 242/490 (49%), Gaps = 17/490 (3%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTAL 84
           LL + VQ+HG + K  ++ +  + N LI MY  C  G    A  VFD    R++++W AL
Sbjct: 177 LLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNAL 236

Query: 85  MCGFLQNGNAKACLSLFCQM----GSSSVKPNEFTLSTNIKASGVLSSVENGM--QIHGM 138
           M  + + G   +  +LF  M     +  ++PNE T  + I A+  LSS  +G+  Q+   
Sbjct: 237 MSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFAR 295

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KSG   +  VG++++  +++ G ++EA  +F  +  ++ +T N +I G V    S++ 
Sbjct: 296 VLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEA 355

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLG----SVGGGTQIHGFLITSGFPYSVKTVIA 254
           + +F   ++   +  + TF   L A          +  G ++HG ++ +G    +K  ++
Sbjct: 356 VGIFMGTRDSFVVNTD-TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGL-IDLKIALS 413

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             LV+ Y KCG + +A RVF L+  +  +SW+++I    Q      AM  +  +R+  + 
Sbjct: 414 NGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCIS 473

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              F   S +   A   L+  G+Q+H  A K    LDTSVSN++V MY  CG   E+ E+
Sbjct: 474 PSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEI 533

Query: 375 FNEMPVKNVVTWTVII-TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           FN M   ++V+W  I+      H    E+V +F  M+   + P+ V ++ +LSA S   +
Sbjct: 534 FNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSV 593

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +E  ++  + +     ++      + ++    ++G +D  + L  SM  +     W +++
Sbjct: 594 LELGKQVHAVVLKHGAIEDNAVD-NALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMI 652

Query: 494 SACRVHGDLE 503
           S    +G L+
Sbjct: 653 SGYIYNGHLQ 662



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 216/431 (50%), Gaps = 21/431 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   LL  G Q+H   VK G   D  ++N L+ MY  CG  + +  +F+ M E ++
Sbjct: 483 LSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDI 542

Query: 79  VSWTALMCGFLQNGNAKACLS--LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSW ++M G + + +A    S  +F  M  S + PN+ T    + A   LS +E G Q+H
Sbjct: 543 VSWNSIM-GVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVH 601

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYS 195
            + +K G   +  V N+++  Y+K G ++   ++F  M   +  ++WN+MI+GY+  G+ 
Sbjct: 602 AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHL 661

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + +     M    ++ D  TF+  L AC S+ ++  G ++H F I S     V  V+  
Sbjct: 662 QETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDV--VVES 719

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KCG +  A +VF+ + QK+  SW+S+I GYA+     +A+E+F +++      
Sbjct: 720 ALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACP 779

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           D     S++   +   LV++G  +  +      G+   + +   ++D+  + G + +  E
Sbjct: 780 DHVTFVSVLSACSHAGLVDRG--LDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQE 837

Query: 374 LFNEMPVK-NVVTWTVIITG--YGKHG----LAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             N MP+K N + W  ++      K G    L KEA     +MLL+    + V Y+   +
Sbjct: 838 YINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEA----SRMLLELEPQNPVNYVLASN 893

Query: 427 ACSHSGLVEES 437
             + +G  E++
Sbjct: 894 FYAATGRWEDT 904



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 4/298 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N +   L   +    + L   S   +L+ G Q+H  ++K G   D  ++N L+  YAK G
Sbjct: 568 NMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSG 627

Query: 62  EMNGACAVFDKML-ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           +M+    +F  M   R+ VSW +++ G++ NG+ +  +     M  S+   +  T S  +
Sbjct: 628 DMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVL 687

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            A   ++++E GM++H   ++S  E + VV ++++DMYSKCGRI+ A+++F+ M  K+  
Sbjct: 688 NACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEF 747

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +WN+MI+GY   G  +K L +F +MQ +G  PD  TF S L AC   G V  G      +
Sbjct: 748 SWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM 807

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEEN 297
              G    ++      ++D   + G L++ +   + +  K + + W ++++   Q ++
Sbjct: 808 EDHGILPHIEHY--SCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKD 863


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/569 (37%), Positives = 337/569 (59%), Gaps = 2/569 (0%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C   + + +G  LHG  VK G    + +++ LIDMY K G++   C VF KM +RN
Sbjct: 163 ALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRN 222

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWTA++ G +  G     L  F +M  S V  +  T +  +KAS   S + +G  IH 
Sbjct: 223 VVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHT 282

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K GF+ +  V N++  MY+KCG+ +   R+F+ M    +++W  +I  YV  G  + 
Sbjct: 283 QTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEH 342

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            +  F++M++    P+++TF + + AC +L     G QIHG ++  G   ++   +A S+
Sbjct: 343 AVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS--VANSI 400

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           V  Y K G L  A  VF  I +K +ISWS++I  Y+Q     EA +    +R    + + 
Sbjct: 401 VTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNE 460

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F LSS++ V    AL+EQGKQ+HA+   +    +  V ++++ MY KCG ++EA+++FN 
Sbjct: 461 FALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNG 520

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M + N+++WT +I GY +HG ++EA+ LF K+    ++PD V ++ VL+ACSH+G+V+  
Sbjct: 521 MKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLG 580

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             YF  + N+ ++ P  EHY CI+D L RAGRL EA+++I SMP      +W TLL +CR
Sbjct: 581 FYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCR 640

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           VHGD++ GR   E LLRLD ++   ++ ++NI+A  G W E   +RKL +SKG+ K  G 
Sbjct: 641 VHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGW 700

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SWV V+ +++ F  GD  HP +E I  VL
Sbjct: 701 SWVNVNDKLNAFVAGDQAHPQSEHITTVL 729



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 243/456 (53%), Gaps = 8/456 (1%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG- 105
           L LN++L  +  K G++  +  +FDKM  R+ +SWT L+ G++   ++   L LF  M  
Sbjct: 91  LELNSELKQL-VKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWV 149

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              ++ ++F +S  +KA G+  ++  G  +HG  +KSG   +  V +++IDMY K G+I 
Sbjct: 150 QPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIE 209

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +  R+F  M  +++++W A+IAG V AGY+ + LL F +M       D  TF   LKA  
Sbjct: 210 QGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASA 269

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
               +  G  IH   I  GF  S  + +  +L   Y KCG      R+F+ ++   V+SW
Sbjct: 270 DSSLLHHGKAIHTQTIKQGFDES--SFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSW 327

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++LI  Y Q+     A+E F+++R+ ++  + +  ++++   A+ A+ + G+QIH +  +
Sbjct: 328 TTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLR 387

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +      SV+NSIV +Y K GL+  A+ +F+ +  K++++W+ II  Y + G AKEA   
Sbjct: 388 LGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDY 447

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR-LCNDKRMKPRIEHYSCIVDSL 464
              M  +  +P+  A  +VLS C    L+E+ ++  +  LC     +  +  +S ++   
Sbjct: 448 LSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMV--HSALISMY 505

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            + G ++EA  +   M +   I+ W  +++    HG
Sbjct: 506 SKCGSVEEASKIFNGMKINNIIS-WTAMINGYAEHG 540



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 198/392 (50%), Gaps = 10/392 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +    A +L+  + + LL +G  +H   +K GF     + N L  MY KCG+ +    +F
Sbjct: 257 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLF 316

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           +KM   +VVSWT L+  ++Q G  +  +  F +M  S+V PN++T +  I A   L+  +
Sbjct: 317 EKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAK 376

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIHG  ++ G      V NSI+ +YSK G +  A+ +F  +  K +I+W+ +IA Y 
Sbjct: 377 WGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYS 436

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             GY+ +       M+  G  P+EF  +S L  CGS+  +  G Q+H  ++  G  +  +
Sbjct: 437 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDH--E 494

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            ++  +L+  Y KCG + EA ++F+ ++  ++ISW+++I GYA+     EA+ LF ++  
Sbjct: 495 AMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISS 554

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCG 366
             L+ D      ++   +   +V+ G     Y   + +    S S      I+D+  + G
Sbjct: 555 VGLKPDYVTFIGVLTACSHAGMVDLG---FYYFMLMTNEYQISPSKEHYGCIIDLLCRAG 611

Query: 367 LIDEATELFNEMP-VKNVVTWTVIITGYGKHG 397
            + EA  +   MP   + V W+ ++     HG
Sbjct: 612 RLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHG 643



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 101/187 (54%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C    LL+ G Q+H  ++ +G   + M+++ LI MY+KCG +  A  +F+ M 
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             N++SWTA++ G+ ++G ++  ++LF ++ S  +KP+  T    + A      V+ G  
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGF- 581

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
            + M M + ++ +P   +   IID+  + GR++EA  M   MP  +  + W+ ++    +
Sbjct: 582 YYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRV 641

Query: 192 AGYSDKG 198
            G  D+G
Sbjct: 642 HGDVDRG 648


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/573 (39%), Positives = 341/573 (59%), Gaps = 17/573 (2%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G ++H   +K+ +     +   +I  Y KC  + +A  +FDVMP +++++W AMI+
Sbjct: 73  AIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMIS 132

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSGFP 246
            Y   GY+ + L LF +M   G  P+EFTF + L +C GS G V G  QIH  +I     
Sbjct: 133 AYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLG-RQIHSHIIK--LN 189

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           Y     +  SL+D Y K G + EAR +F  + ++ V+S +++I GYAQ     EA+ELFR
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY--AAKVPSGLDTSVSNSIVDMYLK 364
           +L+   +Q +    +S++   +  A ++ GKQ+H +   ++VPS +   + NS++DMY K
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYV--VLQNSLIDMYSK 307

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLA 423
           CG +  A  +F+ +  + V++W  ++ GY KHG  +E + LF  M+ ++ V+PD V  LA
Sbjct: 308 CGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLA 367

Query: 424 VLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           VLS CSH GL ++  + F  + + K  ++P  +HY C+VD LGRAGR++ A   ++ MP 
Sbjct: 368 VLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPF 427

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +PS AIW  LL AC VH +L++G  VG  LL+++ +N  NYV++SN++A AG W +   L
Sbjct: 428 EPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSL 487

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
           R L   K + K  GRSW+E+D+ +H F+  D +HP  E++   + E+  R KE  G+V  
Sbjct: 488 RNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEA-GYVPD 546

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFI 661
           +   LHD+ EE KE+ L  HSEKLA+       GL   P  V IRV KNLR+C DCH F 
Sbjct: 547 LSCVLHDVDEEQKEKILLSHSEKLALTF-----GLIATPESVPIRVIKNLRICVDCHNFA 601

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K  SKI      +RD  RFHR  GG CSCGDYW
Sbjct: 602 KYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 217/409 (53%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C +   +  G ++H  ++K  +   + L   LI  Y KC  +  A  VFD M ERNVVSW
Sbjct: 68  CLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSW 127

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++  + Q G A   LSLF QM  S  +PNEFT +T + +    S    G QIH   +K
Sbjct: 128 TAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIK 187

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
             +E +  VG+S++DMY+K G+I+EA  +F  +P + +++  A+I+GY   G  ++ L L
Sbjct: 188 LNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALEL 247

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           FR++Q  G   +  T+TS L A   L ++  G Q+H  L+ S  P  V  V+  SL+D Y
Sbjct: 248 FRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYV--VLQNSLIDMY 305

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR-QLRERSLQVDGFVL 320
            KCG L  ARR+FD + +++VISW+++++GY++     E +ELF   + E  ++ D   +
Sbjct: 306 SKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTV 365

Query: 321 SSMMGVFADFALVEQGKQI--HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            +++   +   L ++G  I     + K+    D+     +VDM  + G ++ A E   +M
Sbjct: 366 LAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P + +   W  ++     H  +   +G F    L  +EP+      +LS
Sbjct: 426 PFEPSAAIWGCLLGACSVH--SNLDIGEFVGHQLLQIEPENAGNYVILS 472


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/618 (36%), Positives = 352/618 (56%), Gaps = 7/618 (1%)

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N   +  ++ G +        + L+  M  +++ P+ FT S  +KA   L+    G+ IH
Sbjct: 68  NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            +  K+GF+ +  V  +++  YSKCG + +A ++FD M  K++++W  MI G +  G   
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + + LFR + E G  PD F     L+AC  LG +  G  I   +   G   +V   +A S
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNV--FVATS 245

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y KCG + EAR VFD + +K ++ WS++I GYA      EA+ELF ++R+ +++ D
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            + +   +   A    +E G              +  +  S++D Y KCG ++EA  ++ 
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYK 365

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  K+ V +  +I+G   +G    A G+F +M    + P+   ++ +L  C+H+GLV++
Sbjct: 366 MMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDD 425

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            + YF+ + +D  + P IEHY C+VD L RAG LDEA NLI+ MP+K ++ +W +LL  C
Sbjct: 426 GRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGC 485

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H + +L   V + L+ L+  N  +YV++SNI++ +  W+E E++R     KG++K+ G
Sbjct: 486 RLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPG 545

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWVEVD  +H F  GD +HPL++KI++ L  + K +KE  G+    ++ L D++EE KE
Sbjct: 546 YSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEA-GYNPTTEFVLFDVEEEEKE 604

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
             L  HSEKLA+  AL+  G       VIRV KNLRVCGDCHE IK +SK+     V+RD
Sbjct: 605 HFLGCHSEKLAVAFALISTGAK----YVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRD 660

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSC DYW
Sbjct: 661 NNRFHCFSDGACSCRDYW 678



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 225/452 (49%), Gaps = 16/452 (3%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           ++V +    +  L+ C++  L   GV +H  + K GF  D+ +  +++  Y+KCG +  A
Sbjct: 99  AIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDA 158

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VFD M+ +NVVSWT ++CG ++ G  +  + LF  +  S ++P+ F +   ++A   L
Sbjct: 159 WKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARL 218

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             +E+G  I     + G   N  V  S++DMY+KCG + EA  +FD M  K ++ W+AMI
Sbjct: 219 GDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMI 278

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY   G   + + LF +M++    PD +     L +C SLG++  G    G +    F 
Sbjct: 279 QGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFL 338

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +   V+  SL+DFY KCG + EA  V+ ++++K  + ++++I G A    +  A  +F 
Sbjct: 339 SN--PVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFG 396

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI------VD 360
           Q+ +  +  +      ++       LV+ G+      +      D SV+ +I      VD
Sbjct: 397 QMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSH-----DFSVTPTIEHYGCMVD 451

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           +  + G +DEA  L   MP+K NV+ W  ++ G   H   + A  + ++++  ++EP   
Sbjct: 452 LLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI--ELEPWNS 509

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            +  +LS    +    +  E      N+K M+
Sbjct: 510 GHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQ 541


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/572 (37%), Positives = 341/572 (59%), Gaps = 12/572 (2%)

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           V  ++E G Q+H    + G  +NP++   ++++Y  C  +  A  +FD +  ++L  WN 
Sbjct: 13  VRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNV 72

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY   G  +  + L+ +M+++G +PD+FTF   LKAC +L ++  G +IH  +I SG
Sbjct: 73  MIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               V   +  +L+D Y KCGC+  AR+VFD I+++ V+ W+S++  Y+Q     E++ L
Sbjct: 133 LESDV--FVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLAL 190

Query: 305 FRQLRERSLQ-VDG-FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            R +    L+  +G FV+S  +   AD  L+ QGK++H Y+ +     +  V  +++DMY
Sbjct: 191 CRVMAFNGLKPTEGTFVIS--IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMY 248

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            K G ++ A  LF  +  K VV+W  +ITGY  HG A EA+ LF++M    V PD + ++
Sbjct: 249 AKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDHITFV 307

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
            VL+ACSH GL+ E + +F  + +D  + P ++HY+C++D LG  GRL+EA  LI  M V
Sbjct: 308 GVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRV 367

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +P   +W  LL +C++HG++E+G    E L+ L+ D+  NYV++SN++A AG W+   RL
Sbjct: 368 EPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARL 427

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
           R L  +KGLKK    SW+EV  ++H F   D +HP +E I+  L    K MKE  G+   
Sbjct: 428 RDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEA-GYAPQ 486

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
           V    HD++++ K + +  HSE+LAI   L+    +   G  + + KNLR+C DCH  IK
Sbjct: 487 VGSVFHDVEDDEKVDMVSCHSERLAIAFGLI----STSAGTKLLIIKNLRICEDCHVAIK 542

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +SKI +    +RD  R+H F+ GVCSCGD+W
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           + LV ++      L+ CS    ++ G ++H  +++ G   D+ +   LIDMYAKCG +  
Sbjct: 96  YGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVES 155

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VFDK+ ER+VV W +++  + QNG     L+L   M  + +KP E T   +I AS  
Sbjct: 156 ARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASAD 215

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
              +  G ++HG   + GFE N  V  +++DMY+K G +N A  +F+++  K +++WNAM
Sbjct: 216 NGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAM 275

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           I GY + G++++ L LF++M+  G++ PD  TF   L AC   G +  G ++H   + S 
Sbjct: 276 ITGYAMHGHANEALDLFKEMK--GKVLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISD 332

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
           F           ++D    CG L EA + + ++  +     W +L+
Sbjct: 333 FNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/648 (33%), Positives = 366/648 (56%), Gaps = 11/648 (1%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS-SSV 109
           N L+ +Y KCG++  A  +FD M  RNVVSW  LM G+L  GN    L LF  M S  + 
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
            PNE+  +T + A      V+ GMQ HG+  K G   +  V ++++ MYS+C  +  A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 170 MFDVMPAK---SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           + D +P +    + ++N+++   V +G  ++ + + R+M +     D  T+   +  C  
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           +  +  G ++H  L+  G  +     +   L+D Y KCG ++ AR VFD ++ ++V+ W+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFD--EFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           +L+  Y Q     E++ LF  +       + +  + ++   A  A +  G  +HA   K+
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                  V N++++MY K G ID +  +F +M  ++++TW  +I GY  HGL K+A+ +F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
           + M+  +  P+ V ++ VLSA SH GLV+E   Y + L  + +++P +EHY+C+V  L R
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AG LDEA+N +++  VK  +  W+TLL+AC VH + +LGR + E +L++D  +   Y ++
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLL 531

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SN++A A  W+    +RKL R + +KK  G SW+++  +IH F      HP + +I++ +
Sbjct: 532 SNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKV 591

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            ++   +K  LG+V  +   LHD+++E KE  L  HSEKLA+   L++      P   IR
Sbjct: 592 QQLLALIK-PLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKI---PSPAP-IR 646

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           + KNLR+C DCH  +K +SK+   + +VRDA RFH F  G C+C D+W
Sbjct: 647 IIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/687 (34%), Positives = 379/687 (55%), Gaps = 34/687 (4%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+   L  G  +H   +  G S  + ++N L+ MY+KCGEM  A  VFD   ER+ VSW
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK-----ASGVLSSVENGMQIH 136
            +L+ G+++ G  +  + +F  M    +  N F L + IK       G +   E    +H
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAE---AVH 235

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------V 190
           G  +K+G + +  + +++IDMY+K G + EAA +F  +   +++ +N MIAG+      +
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
               + + L L+ ++Q  G  P EFTF+S L+AC   G +  G QIHG +I   + +   
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIK--YTFQED 353

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             I  +L+D Y   GC+ +  R F    +  +++W++++ G  Q E   +A+ LF +   
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLI 368
             L+ D F +SS+M   A  A+   G+QI  +A K  SG D  T + NS V MY + G +
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQIQCFATK--SGFDRFTVMGNSCVHMYARSGDV 471

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           D AT  F EM   +VV+W+ +I+ + +HG A++A+  F +M+   V P+ + +L VL+AC
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLV+E   Y+  +  D  + P I+H +C+VD LGRAGRL +A+  I +        I
Sbjct: 532 SHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVI 591

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W++LL++CR+H DLE G+ V   ++ L+  +  +YV++ N++ DAG  +   + R L + 
Sbjct: 592 WRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQ 651

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           +G+KK  G SW+E+   +H F  GD +HP +  I+  L EM  R++         K A  
Sbjct: 652 RGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIE---------KLATT 702

Query: 609 DIQEESKEESL-RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           D +   +E++L   HSEKLA+ L    G ++      IRV KNLRVC DCH  +K +SK 
Sbjct: 703 DTEISKREQNLMNCHSEKLAVAL----GMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKS 758

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                ++RD  RFH F  G CSC DYW
Sbjct: 759 ENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 225/462 (48%), Gaps = 12/462 (2%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
           L L N L+  Y + G    A  + D+M  RN VS+  L+  + + G A   L    +   
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           + V  + F+ +  + A      +  G  +H + +  G      V NS++ MYSKCG + E
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A R+FDV   +  ++WN++++GYV AG  ++ + +F  M+  G   + F   S +K C  
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 227 L--GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++     +HG +I +G    V  V A  ++D Y K G LVEA  +F  +++ +V+ 
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSA--MIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 285 WSSLILGYAQEENL------AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           ++++I G+ + E +      +EA+ L+ +++ R +Q   F  SS++        +E GKQ
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH    K     D  + ++++D+Y   G +++    F   P  ++VTWT +++G  ++ L
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            ++A+ LF + L   ++PD     +V++AC+   +    ++           +  +   S
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           C V    R+G +D A    + M     ++ W  ++S    HG
Sbjct: 461 C-VHMYARSGDVDAATRRFQEMESHDVVS-WSAVISCHAQHG 500


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/703 (32%), Positives = 374/703 (53%), Gaps = 44/703 (6%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCG 87
           G+Q+H   +  G    +   + LI  ++  G  +G   +  +F ++   N+  W  ++ G
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 88  FLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           + ++ N +  + L+  M +  +  PN FT    + +   LSS+E G ++H   +K GFE 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V N++I +YS  G +N A  +FD    + L+++N MI GY      +  L LF +MQ
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G +PDEFTF +    C  L     G QIH  +  +        ++  ++VD Y KCG 
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264

Query: 267 LVEARRVF--------------------------------DLIEQKSVISWSSLILGYAQ 294
           +  A RVF                                + + ++ VISW+++I GY+Q
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTS 353
               +EA+ELF+++    ++ D   L +++   A     + GK++ H Y        +T 
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384

Query: 354 VSNSIVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           ++ +++DMY KCG ID A E+F  +   +K    +  +I G  +HGL + A+ +FR+++ 
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             ++PD V ++ VL AC HSGL+EE ++ F  + N   +KP++EHY C+VD LGR G L+
Sbjct: 445 TGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLE 504

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           EA +L++ MP + +  IW+ LLSACR HG++++G   G+ LL ++  +   YV++SNI A
Sbjct: 505 EAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILA 564

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
           DA  W E  ++RK+    G++K  G S++E+   IH F   D +HP  ++I  +L +M  
Sbjct: 565 DANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAM 624

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           R+K   G+V      + DI EE KE  +  HSEKLA+   L+       P   IR+ KNL
Sbjct: 625 RLKSA-GYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYC----SPTDTIRIVKNL 679

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+C DCH+  K +S+I      VRD  RFH F  G CSC D+W
Sbjct: 680 RICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 207/424 (48%), Gaps = 47/424 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L+ G ++H  ++K GF  DL + N LI +Y+  G +N A  +FD+ L R++
Sbjct: 118 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+  ++ G+ +    ++ L LF +M +S + P+EFT         VL+    G QIH  
Sbjct: 178 VSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQ 237

Query: 139 CMKS--GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-------------------- 176
             K+    + N ++ ++I+DMY+KCG IN A R+F  M                      
Sbjct: 238 VYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEI 297

Query: 177 ------------KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
                       + +I+W AMI+GY  AG   + L LF++M+  G  PDE T  + L AC
Sbjct: 298 NVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSAC 357

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI--EQKSV 282
             LG+   G +++   I +G  ++  T++  +++D Y KCG +  A  +F  +    K+ 
Sbjct: 358 ARLGAFDLGKRLYHQYIENGV-FNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTG 416

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI--- 339
             ++S+I G AQ      A+ +FR+L    L+ D      ++       L+E+GK++   
Sbjct: 417 FVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFES 476

Query: 340 --HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
             +AY  K            +VD+  + G ++EA +L  +MP + N V W  +++    H
Sbjct: 477 MFNAYGIKP----QMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTH 532

Query: 397 GLAK 400
           G  K
Sbjct: 533 GNVK 536



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 163/337 (48%), Gaps = 13/337 (3%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC---LVEARRVFDLI 277
           L++C S      G QIH   I +G  + + ++    L+ F+   G    L  +R +F  I
Sbjct: 16  LESCKSFKQ---GLQIHAQTIVNGLHHQIFSI--SRLISFFSLLGSKDGLDHSRLLFSQI 70

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL-QVDGFVLSSMMGVFADFALVEQG 336
           +  ++  W+++I GY++ +N  EA+ L+  +  + +   + F    ++   A  + +E G
Sbjct: 71  DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
            ++H++  K     D  V N+++ +Y   G ++ A  LF+E  V+++V++  +I GY + 
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR-MKPRIE 455
              + A+ LF +M    + PD   ++A+ S CS        ++  +++  + R +   I 
Sbjct: 191 NQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNIL 250

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
             S IVD   + G ++ A+ +  +M    S A W +++      G++ + R   ++   +
Sbjct: 251 LKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVAR---KLFNHM 307

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
              + +++  M + ++ AG  +E   L K   + G+K
Sbjct: 308 HERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/595 (36%), Positives = 348/595 (58%), Gaps = 41/595 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K+GF+ + ++ N+++D+Y KCG I +A ++FD MP +  ++W +++  +  A 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 194 YSDKGLLLFRKMQEH-GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              + L +   M  H G  PD F F   ++AC SLG +  G Q+H   + S F      V
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFF--CDDEV 141

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL+D Y KCG   +AR VFD I  K+ +SW+S+I GYA+     EAM+LF Q   R+
Sbjct: 142 VKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRN 201

Query: 313 L--------------------------------QVDGFVLSSMMGVFADFALVEQGKQIH 340
           L                                 VD  VLSS++G  A+ AL+E GKQIH
Sbjct: 202 LFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIH 261

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
                +       +SN++VDMY KC  I  A ++F  MP K+V++WT II G  +HG A+
Sbjct: 262 GLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAE 321

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ L+ +M+L  ++P+ V ++ +L ACSH+GLV   +E F  +  D  + P ++HY+C+
Sbjct: 322 EALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D L R+G LDEA+NL++ +P KP    W +LLSAC  H +LE+G  + + +L L  ++P
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDP 441

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLT 579
             Y+++SN++A A  W    ++RKL  S  ++K  G S ++  K+   F+ G+   HP+ 
Sbjct: 442 STYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
            +I  +L +++  M++  G+V    + L+DI+++ KE+ L  HSE+LA+   L++     
Sbjct: 502 NEICNLLKDLDAEMRKR-GYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKA---- 556

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG +IR+ KNLR+CGDCH  +K +S I+K   +VRDATR+H F+ G CSC D+W
Sbjct: 557 VPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 223/444 (50%), Gaps = 41/444 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++        +LH  ++K GF    +L+N L+D+Y KCG +  A  +FD+M  R+ 
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++    +    +  LS+   M +   ++P+ F  +  ++A   L  +  G Q+H 
Sbjct: 70  VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM----------------------- 174
             M S F  + VV +S+IDMY+KCG+ ++A  +FD +                       
Sbjct: 130 RFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCE 189

Query: 175 --------PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-EIPDEFTFTSTLKACG 225
                   P ++L +W A+I+G + +G+      LF +M+  G +I D    +S +  C 
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L  +  G QIHG +I  GF   +   I+ +LVD Y KC  ++ A+ +F  + +K VISW
Sbjct: 250 NLALLELGKQIHGLVIALGFESCL--FISNALVDMYAKCSDILAAKDIFYRMPRKDVISW 307

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +S+I+G AQ     EA+ L+ ++    ++ +      ++   +   LV +G+++   +  
Sbjct: 308 TSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFR-SMT 366

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
               ++ S+ +   ++D+  + G +DEA  L +++P K +  TW  +++   +H   +  
Sbjct: 367 TDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMG 426

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
           V +  ++L  D++P+  +   +LS
Sbjct: 427 VRIADRVL--DLKPEDPSTYILLS 448



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 169/396 (42%), Gaps = 74/396 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F   L+ C    S     ++H  +I +GF  S  ++++ +L+D Y KCG + +A ++FD 
Sbjct: 6   FLHQLQLCARRQSASAAGELHSQIIKAGFDKS--SLLSNTLLDVYGKCGLIPQALQLFDE 63

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQ 335
           +  +  +SW+S++  + +       + +   +     LQ D FV + ++   +    +  
Sbjct: 64  MPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRL 123

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GKQ+HA         D  V +S++DMY KCG  D+A  +F+ +  KN V+WT +I+GY +
Sbjct: 124 GKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYAR 183

Query: 396 HGLAKEAVGLF----------------------------------RKMLLDDVEPDGVAY 421
            G   EA+ LF                                  R+  +D V+P  +  
Sbjct: 184 SGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDP--LVL 241

Query: 422 LAVLSACSHSGLVE--------------ESQEYFSRLCNDKRMK--------------PR 453
            +V+  C++  L+E              ES  + S    D   K              PR
Sbjct: 242 SSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPR 301

Query: 454 --IEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREV 508
             +  ++ I+    + G+ +EA  L + M    +KP+   +  LL AC   G +  GRE+
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361

Query: 509 GEILLRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
              +      NP   +Y  + ++ + +G  +E E L
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENL 397



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 126/242 (52%), Gaps = 16/242 (6%)

Query: 5   SFSLVSERQR----------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLI 54
           SFSL +E +R          L+  +  C+   LL+ G Q+HG ++ +GF   L ++N L+
Sbjct: 221 SFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALV 280

Query: 55  DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEF 114
           DMYAKC ++  A  +F +M  ++V+SWT+++ G  Q+G A+  L+L+ +M  S +KPNE 
Sbjct: 281 DMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEV 340

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFD 172
           T    + A      V  G ++    M + +  NP + +   ++D+ S+ G ++EA  + D
Sbjct: 341 TFVGLLYACSHAGLVSRGRELF-RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLD 399

Query: 173 VMPAKS-LITWNAMIAGYVLAGYSDKGLLLF-RKMQEHGEIPDEFTFTSTLKACGSL-GS 229
            +P K    TW ++++  +     + G+ +  R +    E P  +   S + A   + GS
Sbjct: 400 KIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGS 459

Query: 230 VG 231
           V 
Sbjct: 460 VS 461


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/665 (34%), Positives = 368/665 (55%), Gaps = 17/665 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LHG  V  G++ D  + + L  +Y K    + A  VFD +   + + W  L+ G      
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL----P 191

Query: 94  AKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               L  F +M  +  V+P+  TL+++++A+   S +  G  +HG  +K G   +  V  
Sbjct: 192 GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            ++ +YSKCG ++ A  +FD M    L+ +NA+I+GY + G  +  + LF+++   G  P
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  T  + +      G       +H F++ +        +++ +L   Y +   +  AR 
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARL--DADALVSTALTTLYCRLNDMESARS 369

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +K++ SW+++I GYAQ      A+ LF+ ++E ++Q +   +SS +   A    
Sbjct: 370 IFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGA 429

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  GK +H   +K    L+  V  +++DMY KCG I EA  +F+ M  KNVV+W  +I+G
Sbjct: 430 LSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG   EA+ L++ ML   + P    +L+V+ ACSH GLV+E Q+ F  + N+ R+ P
Sbjct: 490 YGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITP 549

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVG 509
            IEH +C+VD LGRAG+L+EA  LI   P   + P   +W  LL AC VH + +L +   
Sbjct: 550 GIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGP--GVWGALLGACMVHKNSDLAKLAS 607

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + L  LD +N   YV++SN++     ++E   +R+ A+++ L K  G + +E+    H F
Sbjct: 608 QKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVF 667

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD  HP +E I+  L  +  +M E  G+    + AL+D++EE KE  ++VHSEKLAI 
Sbjct: 668 MAGDHLHPQSEAIYSYLERLTAKMIEA-GYQPVTEAALYDVEEEEKEHMVKVHSEKLAIA 726

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    L+ +PG  IR+ KNLRVC DCH   K +SK+ + + VVRDA+RFH F  GVCS
Sbjct: 727 FGL----LSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCS 782

Query: 690 CGDYW 694
           CGDYW
Sbjct: 783 CGDYW 787


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/618 (38%), Positives = 369/618 (59%), Gaps = 15/618 (2%)

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKS 142
           M  F  NG     L  F +M  S  +P+  T S  + A   + +  ++ G +IH     S
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           G   N VVG ++I MY KCGR+++A   F+ +  K+ +TWNAM+  Y L G   + L LF
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 203 RKMQEHGEI--PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           R+M E      PD+F+F+  ++AC +L  +  G +IH  L   G       V+  +L++ 
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 261 YVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGF 318
           Y KCG L EAR+VFD I   +  + W+++I  YAQ     +A++L+R + + + L     
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              +++ V A+ + ++QG+ IHA         +  VSN++V MY KCG +DEA ++F+ M
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            +K+ ++W  II+ Y  HG + +A+ L+++M L  V+P  V ++ +LSACSH GLV +  
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           +YF R+ +D R+KP + H+ CI+D LGR GRL EA+ +++SMP++ +   W +LL AC+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 499 HGDLELG-REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           HGDL+ G R   +++ R+   +   YV++SNI+A AG W + E++RK+  ++G+KK  G+
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSG-GYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGK 479

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+E+   +H F  GD +HP  E+I+  L +M + MK  LG+V       HD++EE KE+
Sbjct: 480 SWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMK-GLGYVPDTSSVFHDLEEEEKED 538

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            L  HSEKLAI    V G +   PGK ++R+ KNLRVC DCH   K +S+I     VVRD
Sbjct: 539 LLVCHSEKLAI----VYGNM-VVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRD 593

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH FE G CSC DYW
Sbjct: 594 AARFHLFENGSCSCRDYW 611



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 200/385 (51%), Gaps = 12/385 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +D G ++H      G   ++++   +I MY KCG ++ A A F+++  +N V+W A+M  
Sbjct: 47  IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 106

Query: 88  FLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           +  +G  +  L LF +M   S S +P++F+ S  I+A   L  +E G +IH M  + G E
Sbjct: 107 YKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKE 166

Query: 146 WNP--VVGNSIIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
            +   VVG ++++MYSKCG + EA ++FD +      + WNAMIA Y   G   + L L+
Sbjct: 167 LHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLY 226

Query: 203 RKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           R M +  ++ P + TF + +  C  L ++  G  IH  +  + F  ++  +++ +LV  Y
Sbjct: 227 RSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANL--LVSNALVHMY 284

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCGCL EA  VF  ++ K  ISW+++I  YA   +  +A+ L++++  + ++       
Sbjct: 285 GKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFV 344

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
            ++   +   LV  G   + Y  +    +  SV +   I+D+  + G + EA  +   MP
Sbjct: 345 GLLSACSHGGLVADGLD-YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMP 403

Query: 380 VK-NVVTWTVIITGYGKHGLAKEAV 403
           ++ N V W  ++     HG  K  V
Sbjct: 404 IQANAVQWMSLLGACKTHGDLKRGV 428



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 4/181 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C++   L  G  +H  +    F  +L+++N L+ MY KCG ++ A  VF  M  ++ +SW
Sbjct: 249 CAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISW 308

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             ++  +  +G++   L L+ +M    VKP E T    + A      V +G+  +   M+
Sbjct: 309 NTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFYRMQ 367

Query: 142 SGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAGYSDKG 198
                 P V +   IID+  + GR+ EA  +   MP ++  + W +++      G   +G
Sbjct: 368 DDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRG 427

Query: 199 L 199
           +
Sbjct: 428 V 428


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/678 (32%), Positives = 398/678 (58%), Gaps = 18/678 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+   L  G  +HG +V+     +  LNN LI MY K G++  A  +F+ +  R    W
Sbjct: 211 CSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPW 270

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T ++  + Q+G  +  L++F +M    ++PN+ T+   + A   L  V+ G  +HG  ++
Sbjct: 271 TPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIR 330

Query: 142 SGFEWN-PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
              +     +G +++++Y+  G + +  ++F+ +  K++++WN +I+ +   G  ++ LL
Sbjct: 331 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 390

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF +MQ  G +PD ++  S+L ACG++     G QIHG++I +G   +    +  +L+D 
Sbjct: 391 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG---NFNDFVQNALIDM 447

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG +  A ++F+ I++KS+++W+S+I G++Q     EA+ LF Q+    +++D    
Sbjct: 448 YAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTF 507

Query: 321 SSMMGVFADFALVEQGKQIH----AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            S++   +    +E+GK +H     Y  +  S LDT+++    DMY KCG +  A  +F+
Sbjct: 508 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALT----DMYSKCGELQMAHGVFD 563

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            M  +++V+W+V+I GYG HG     + LF +ML   ++P+ + ++ +LSACSH+G VEE
Sbjct: 564 RMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEE 623

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            + YF+ + ++  ++P+ +H++C+VD L RAG L+ A  +I S+P   + +IW  LL+ C
Sbjct: 624 GKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 682

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R+H  +++ + + + LL +D  +   Y ++SNI+A+ G+W++  ++R + +SKGL+KV G
Sbjct: 683 RIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPG 742

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            S +E+DK+I+ F  GD +H  T+ I++ L      +  ++ +      ++    + +KE
Sbjct: 743 YSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQV-YDSEPDNSIVGTSKFNKE 801

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            ++  HSEKLAI   ++    N +PG  +R+ KNLRVC DCH F K  SKI     ++RD
Sbjct: 802 NNVVSHSEKLAIAFGII----NTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRD 857

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSC DYW
Sbjct: 858 LNRFHCFRNGSCSCNDYW 875



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 262/486 (53%), Gaps = 8/486 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  G ++HG ++K GF  D ++   L+ MY +   ++ AC  FD M  R+V
Sbjct: 107 LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDV 166

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W++++  F+QNG A   L +F QM S +V+P+  T+ +  +A   L S+  G  +HG 
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGY 226

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++   E N  + NS+I MY K G +  A R+F+ +P +    W  MI+ Y  +G   + 
Sbjct: 227 VVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEA 286

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F KMQE    P++ T    L AC  LG V  G  +HGF+I       +   +  +L+
Sbjct: 287 LNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELD-FLGPALM 345

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y   G L +  +VF+ I++K+++SW++LI  + +     EA+ LF Q++ + L  D +
Sbjct: 346 ELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSY 405

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L+S +      +  + G QIH Y  K     +  V N+++DMY KCG +  A ++F ++
Sbjct: 406 SLASSLSACGTISFSQLGAQIHGYIIKT-GNFNDFVQNALIDMYAKCGFVHSANKMFEKI 464

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K++VTW  +I G+ ++G + EA+ LF +M ++ V+ D + +L+V+ ACSH G +E+ +
Sbjct: 465 KEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGK 524

Query: 439 EYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
               +L        R + Y  + + D   + G L  A  + + M  + SI  W  +++  
Sbjct: 525 WVHHKLI---MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSER-SIVSWSVMIAGY 580

Query: 497 RVHGDL 502
            +HG +
Sbjct: 581 GMHGQI 586



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 225/477 (47%), Gaps = 13/477 (2%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           RC +   L     QLH  L   G       +  LI+ YA+ G    +  VFD   + +  
Sbjct: 10  RCATSTTL----TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSF 65

Query: 80  SWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            W  L+  ++  G  +  +SL+ +M      + + F   + +KA      +  G ++HG 
Sbjct: 66  MWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGR 125

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GFE + VV  S++ MY +   +++A + FD MP + ++ W++++  +V  G + +G
Sbjct: 126 VIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEG 185

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F +M      PD  T  S  +AC  LGS+  G  +HG+++      +    +  SL+
Sbjct: 186 LDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNAS--LNNSLI 243

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y K G L  A R+F+ +  +    W+ +I  Y Q     EA+ +F +++E  ++ +  
Sbjct: 244 VMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQV 303

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            +  ++   A    V++G+ +H +  +  +   LD  +  +++++Y   G + +  ++F 
Sbjct: 304 TMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF-LGPALMELYADTGNLRDCHKVFE 362

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K +++W  +I+ + ++G  +EA+ LF +M    + PD  +  + LSAC      + 
Sbjct: 363 TIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQL 422

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
             +    +         ++  + ++D   + G +  A  + E +  K S+  W +++
Sbjct: 423 GAQIHGYIIKTGNFNDFVQ--NALIDMYAKCGFVHSANKMFEKIKEK-SLVTWNSMI 476


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 382/687 (55%), Gaps = 36/687 (5%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+ L +  G  +H  +V  G    L L+N +  MYA+CGEM  A  VFD   ER+ VSW
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSW 171

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK---------ASGVLSSVENG 132
            AL+ G+++ G  +  L +F  M    +  N F L + IK         A+G +      
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             +HG  +K+G + +  + +++IDMY+K G +  A  +F  +P  ++I  NAMIAG+   
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291

Query: 193 GYSD---KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             +D   + L L+ ++Q  G  P EF+F+S L+AC   G  G G QIHG ++   F   V
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              I  +L+D Y   GC+ +  R F  + ++ V+ W+S+I G  Q E   EA+ LF++  
Sbjct: 352 --YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESV 409

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              L+ D F +SS+M   A  A+   G+QI   A K      T++ NS + M  + G +D
Sbjct: 410 RCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVD 469

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV-EPDGVAYLAVLSAC 428
            AT  F EM  ++VV+W+ +I+ +  HG A++A+ +F +ML   V  P+ + +L++L+AC
Sbjct: 470 AATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTAC 529

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH GLV+E   Y+  + ++  + P I+H +C+VD LGRAGRL +A+  I          +
Sbjct: 530 SHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVV 589

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W++LL++CR+HGD+E G+ V + ++ L+  +  +YV++ N++ DAG  +   + R L + 
Sbjct: 590 WRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKE 649

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           +G+KK  G SW+E+   +H F  GD +HP ++ I++ + EM  +       V G+     
Sbjct: 650 RGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSK-------VAGIS---- 698

Query: 609 DIQEESKEESLR-VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
                S+E+ L   HSEKLA+      G ++      IRV KNLRVC DCH  ++ +SK 
Sbjct: 699 -----SREQDLAGCHSEKLAVAF----GMIHLPQSAPIRVMKNLRVCRDCHSTMELISKS 749

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +   ++RDA RFHRF  G CSCG YW
Sbjct: 750 ERREIILRDAIRFHRFRDGSCSCGGYW 776



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 236/499 (47%), Gaps = 27/499 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK--CGEMNGACAVFDKMLER 76
           LR C+    L +   +H  L +   +  L L N L+  Y +   G    A  + D+M  R
Sbjct: 9   LRSCAA---LPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRR 65

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N VS+  ++  + + G     L+ F +  + +   + FT +  + A      V  G  +H
Sbjct: 66  NAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVH 125

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            M +  G      + NS+  MY++CG + EA R+FD    +  ++WNA+++GYV AG  +
Sbjct: 126 AMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGARE 185

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKAC------GSLGSVGGGT---QIHGFLITSGFPY 247
           + L +F  M  HG   + F   S +K C       + G VGGG     +HG ++ +G   
Sbjct: 186 ETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGL-- 243

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN---LAEAMEL 304
                +A +++D Y K G L  A  +F  +   +VI  +++I G+ +EE      EA+ L
Sbjct: 244 DADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGL 303

Query: 305 FRQLRERSLQVDGFVLSSMM---GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + +L+ R +Q   F  SS++    +  +F     GKQIH    K     D  + ++++D+
Sbjct: 304 YSELQSRGMQPSEFSFSSILRACNLAGEFGF---GKQIHGQVLKHSFQGDVYIGSALIDL 360

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y   G +++    F  +P ++VV WT +I+G  ++ L +EA+ LF++ +   + PD  A 
Sbjct: 361 YSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAM 420

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
            +V++AC+ S  V  + E    L             +  +    R+G +D A    + M 
Sbjct: 421 SSVMNACA-SLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEME 479

Query: 482 VKPSIAIWQTLLSACRVHG 500
            +  ++ W  ++S+   HG
Sbjct: 480 SRDVVS-WSAVISSHAHHG 497


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/605 (35%), Positives = 356/605 (58%), Gaps = 13/605 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L+ C  N+ + +G  LHG  VK  F   + + + L+DMY K G+++  C VF +M 
Sbjct: 71  LSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP 130

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVVSWTA++ G ++ G  K  L+ F  M    V  + +T S+ +KA     ++  G +
Sbjct: 131 LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGRE 190

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K GF     V N++  MY+KCG+++   R+F+ M  + +++W  +I   V  G 
Sbjct: 191 IHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQ 250

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            +  +  FR+M+E    P+EFTF + +  C +LG +  G Q+H  +I  G   S+   +A
Sbjct: 251 EENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS--VA 308

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S++  Y KC  L  A  VF  + ++ +ISWS++I GYAQ     EA +    +R    +
Sbjct: 309 NSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPR 368

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F  +S++ V  + A++EQGKQ+HA+   V    +T V +++++MY KCG I EA+++
Sbjct: 369 PNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKI 428

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+E    N+V+WT +I GY +HG ++EA+ LF+K+    + PD V ++AVL+ACSH+GLV
Sbjct: 429 FDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLV 488

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +    YF+ L    ++ P  +HY C++D L RAGRL++A+++I+SMP +    +W TLL 
Sbjct: 489 DLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLR 548

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR+HGD++ G+   E +L+LD +  V ++ ++N++A  G W E   +RK+ +SKG+ K 
Sbjct: 549 ACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKE 608

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL----MEMEKRMKEELGFVYGVKYALHDI 610
            G SW++    +  F  GD +HP  E I+ VL     + E  M+E       + + L+++
Sbjct: 609 PGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEMHMQE-------MDFLLNEV 661

Query: 611 QEESK 615
           QE  +
Sbjct: 662 QESQR 666



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 258/475 (54%), Gaps = 17/475 (3%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++    K G +N A  +FDKML+R+ +SWT ++ G++   N    LSLF +M    V+
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMW---VE 61

Query: 111 P----NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           P    + F LS  +KA G+  SV  G  +HG  +K+ F  +  VG++++DMY K G+++E
Sbjct: 62  PGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDE 121

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
              +F  MP +++++W A+IAG V AGY+ + L  F  M       D +TF+S LKAC  
Sbjct: 122 GCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD 181

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
            G++  G +IH   +  GF  +  + +A +L   Y KCG L    R+F+ + Q+ V+SW+
Sbjct: 182 SGALNYGREIHCQTLKKGF--TAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I+   Q      A++ FR++RE  +  + F  ++++   A    +E G+Q+HA+  + 
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                 SV+NSI+ MY KC  +D A+ +F  +  +++++W+ +I+GY + G  +EA    
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYL 359

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR-LCNDKRMKPRIEHYSCIVDSLG 465
             M  +   P+  A+ +VLS C +  ++E+ ++  +  LC        ++  S +++   
Sbjct: 360 SWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQ--SALINMYS 417

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLD 516
           + G + EA  + +      +I  W  +++    HG     ++L +++ ++ LR D
Sbjct: 418 KCGSIKEASKIFDEAEYN-NIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPD 471


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/670 (34%), Positives = 371/670 (55%), Gaps = 11/670 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  +H  + +   S D+ +N  L++ Y KCG +  A  VFD M  R+V +W +++  
Sbjct: 26  LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 85

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  +  +     +F +M     + +  T  + + A     ++++G  +     ++ FE +
Sbjct: 86  YSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELD 145

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             VG ++I MY++C     AA++F  M  K+LITW+A+I  +   G+  + L  FR MQ+
Sbjct: 146 LFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQ 205

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC--G 265
            G +P+  TF S L    +   +   ++IH  +   G   +  T ++ +LV+ Y +C  G
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT--TTMSNALVNVYGRCETG 263

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L  A  +   ++++ + +W+ LI GY       EA+E +++L+  ++ VD     S++ 
Sbjct: 264 ELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLN 323

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                  + +GK IH+ A +     D  V N++ +MY KCG ++ A  +F+ MP+++ V+
Sbjct: 324 ACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS 383

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  ++  Y +HG ++E + L RKM  + V+ +G+ +++VLS+CSH+GL+ E  +YF  L 
Sbjct: 384 WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 443

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D+ ++ + EHY C+VD LGRAG+L EA+  I  MP +P I  W +LL ACRVH DL+ G
Sbjct: 444 HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRG 503

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +     LL LD  N    V++SNI+++ G W    +LR+   S+ +KKV G S ++V  +
Sbjct: 504 KLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNK 563

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F   D +HP   +I+  + E+   M+E  G+V   K  LHD+ EE KE  L  HSEK
Sbjct: 564 VHEFRVRDTSHPRAAEIYDKVEELCFAMREA-GYVPDTKMVLHDVDEEQKESLLAYHSEK 622

Query: 626 LAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           LAI   L+       P K  + +FKNLRVC DCH   K +SKI     VVRD  RFH F 
Sbjct: 623 LAIAFGLI-----STPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFR 677

Query: 685 GGVCSCGDYW 694
            G CSC DYW
Sbjct: 678 DGSCSCKDYW 687



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 240/458 (52%), Gaps = 28/458 (6%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           VK N  T    + +     ++  G  IH    +S    +  V  ++++ Y+KCG + +A 
Sbjct: 6   VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           ++FD MP +S+ TWN+MI+ Y ++  S +   +F++MQ  GE  D  TF S L AC +  
Sbjct: 66  KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           ++  G  +   +  + F   +   +  +L+  Y +C     A +VF  ++QK++I+WS++
Sbjct: 126 NLQHGKHVRESISETSFELDL--FVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAI 183

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I  +A   +  EA+  FR +++  +  +     S++  F   + +E+  +IH    +   
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE--H 241

Query: 349 GLD--TSVSNSIVDMYLKC--GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           GLD  T++SN++V++Y +C  G +D A  +  EM  + +  W V+I GY  HG ++EA+ 
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALE 301

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR-----LCNDKRMKPRIEHYSC 459
            ++++ L+ +  D V +++VL+AC+ S  + E +   S      L +D  +K      + 
Sbjct: 302 TYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK------NA 355

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD- 518
           + +   + G ++ A+ + +SMP++ +++ W  +L A   HG+ E   EV +++ +++ + 
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE---EVLKLIRKMEQEG 411

Query: 519 ---NPVNYVMMSNIHADAGSWNE-CERLRKLARSKGLK 552
              N + +V + +  + AG   E C+    L   +G++
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 198/412 (48%), Gaps = 8/412 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G  +  ++ +  F  DL +   LI MYA+C     A  VF +M ++N+
Sbjct: 118 LDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNL 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W+A++  F  +G+    L  F  M    + PN  T  + +      S +E   +IH +
Sbjct: 178 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237

Query: 139 CMKSGFEWNPVVGNSIIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
             + G +    + N+++++Y +C  G ++ A  +   M  + +  WN +I GY L G S 
Sbjct: 238 ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSR 297

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L  ++++Q      D+ TF S L AC S  S+  G  IH   +  G    V  ++  +
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV--IVKNA 355

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L + Y KCG +  ARR+FD +  +S +SW+ ++  YAQ     E ++L R++ +  ++++
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 415

Query: 317 GFVLSSMMGVFADFALVEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           G    S++   +   L+ +G Q  H+        + T     +VD+  + G + EA +  
Sbjct: 416 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 475

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++MP +  +VTW  ++     H          RK+L  +++P   +   VLS
Sbjct: 476 SKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLL--ELDPGNSSASVVLS 525


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/726 (34%), Positives = 390/726 (53%), Gaps = 52/726 (7%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQL----HGALVKMGF---SFDLMLNNDLIDMY 57
           SF+LVS        L  CS   L D G +L    H   +K GF     +    N L+ MY
Sbjct: 152 SFTLVS-------VLLACSH--LADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMY 202

Query: 58  AKCGEMNGACAVF--DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           A+ G ++ A  +F        ++V+W  ++   +Q G  +  + +   M +  V+P+  T
Sbjct: 203 ARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVT 262

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
            ++ + A   L  +  G ++H   +K      N  V ++++DMY+   +++ A R+FD++
Sbjct: 263 FASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMV 322

Query: 175 P--AKSLITWNAMIAGYVL-AGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSV 230
           P   + L  WNAMI GY    G  ++ + LF +M+ E G  P E T    L AC      
Sbjct: 323 PEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVF 382

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
            G   +HG+++      +    +  +L+D Y + G + EA  +F +I+ + ++SW++LI 
Sbjct: 383 TGKEAVHGYVVKRDM--ASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLIT 440

Query: 291 GYAQEENLAEAMELFRQLRERS-------------LQVDG-------FVLSSMMGVFADF 330
           G   +  ++EA +L R+++  S               VDG         L +++   A  
Sbjct: 441 GCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVL 500

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A   +GK+IH YA +     D +V +++VDMY KCG +  A  +F+ +P +NV+TW V+I
Sbjct: 501 AAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLI 560

Query: 391 TGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
             YG HGL  EA+ LF +M+ + +  P+ V ++A L+ACSHSGLV+   E F  +  D  
Sbjct: 561 MAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYG 620

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESM-PVKPSIAIWQTLLSACRVHGDLELGREV 508
            +P    ++C+VD LGRAGRLDEA  +I SM P +  ++ W T+L ACR+H +++LGR  
Sbjct: 621 FEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIA 680

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L  L+ D   +YV++ NI++ AG W     +R + R +G+ K  G SW+E+D  IH 
Sbjct: 681 AERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHR 740

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  G+  HP + ++H  +  + +RM+ E G+V      LHD+ E  K   LR HSEKLAI
Sbjct: 741 FMAGESAHPESAQVHAHMDALWERMRRE-GYVPDTSCVLHDVDEAEKAAMLRYHSEKLAI 799

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+R      PG  IRV KNLRVC DCHE  K +S+++    V+RD  RFH F  G C
Sbjct: 800 AFGLLRA----PPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTC 855

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 856 SCGDYW 861



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 246/521 (47%), Gaps = 62/521 (11%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTAL---MCGFLQNGNA-KACLSLFC 102
           ++N L+  YA+CG+++ A A+F       R+ VS+ +L   +C F + G+A  A   +  
Sbjct: 87  VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLA 146

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVEN--GMQIHGMCMKSGF-----EWNPVVGNSII 155
               SS     FTL + + A   L+   +  G + H   +K GF     E  P   N+++
Sbjct: 147 DHEVSS-----FTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPF--NALL 199

Query: 156 DMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
            MY++ G +++A R+F    A    L+TWN MI+  V  G  ++ + +   M   G  PD
Sbjct: 200 SMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPD 259

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             TF S L AC  L  +G G ++H F++      +  + +A +LVD Y     +  ARRV
Sbjct: 260 GVTFASALPACSRLELLGVGREVHAFVLKDD-DLAANSFVASALVDMYASNEQVSHARRV 318

Query: 274 FDLIEQ--KSVISWSSLILGYAQEENL-AEAMELFRQLRERSLQVDGFVLS--SMMGVFA 328
           FD++ +  + +  W+++I GYAQ   +  EA+ELF ++   +    G   S  +M GV  
Sbjct: 319 FDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEA----GCAPSETTMAGVLP 374

Query: 329 DFALVE--QGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A  E   GK+ +H Y  K     +  V N+++DMY + G +DEA  +F  + ++++V+
Sbjct: 375 ACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVS 434

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLL-------------DDVE-------PDGVAYLAVL 425
           W  +ITG    GL  EA  L R+M L             DD         P+ +  + +L
Sbjct: 435 WNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLL 494

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
             C+        +E          ++  +   S +VD   + G L  A+ + + +P + +
Sbjct: 495 PGCAVLAAPARGKEIHGYAVRHA-LESDLAVGSALVDMYAKCGCLALARAVFDRLPRR-N 552

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYV 524
           +  W  L+ A  +HG   LG E   +  R+  +G+   N V
Sbjct: 553 VITWNVLIMAYGMHG---LGDEALALFDRMVANGEATPNEV 590



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 210/485 (43%), Gaps = 43/485 (8%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWNPVVGNSIIDMYSKCGRINEAAR 169
           + F L   IK++  L    +   IHG  ++        P V N+++  Y++CG ++ A  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 170 MFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           +F   P   +  +++N++I+   L       L   R M    E+   FT  S L AC  L
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEV-SSFTLVSVLLACSHL 165

Query: 228 GSVGG--GTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVF--DLIEQKSV 282
              G   G + H F +  GF    +      +L+  Y + G + +A+R+F         +
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ++W+++I    Q     EA+++   +    ++ DG   +S +   +   L+  G+++HA+
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285

Query: 343 AAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGYGKH-GL 398
             K      ++ V++++VDMY     +  A  +F+ +P   + +  W  +I GY +H G+
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345

Query: 399 AKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            +EA+ LF +M  +    P       VL AC+ S +    +     +        R    
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQ- 404

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREV----- 508
           + ++D   R GR+DEA  +   + ++  I  W TL++ C V G      +L RE+     
Sbjct: 405 NALMDMYARLGRMDEAHTIFAMIDLR-DIVSWNTLITGCIVQGLISEAFQLVREMQLPSS 463

Query: 509 ---GEILLR-----LDGDN--PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
              GE +L      +DG    P N  +M+ +         C  L   AR K +   A R 
Sbjct: 464 AASGETMLEGDDTSVDGQRCMPNNITLMTLLPG-------CAVLAAPARGKEIHGYAVRH 516

Query: 559 WVEVD 563
            +E D
Sbjct: 517 ALESD 521


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/569 (38%), Positives = 335/569 (58%), Gaps = 9/569 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +V  G ++H   +K+ +     +   +I +Y+KC  +  A  +FD M  +++++W AMI+
Sbjct: 25  AVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMIS 84

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G++ + L LF +M      P+EFTF + L +C        G QIH  +      Y
Sbjct: 85  GYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRN--Y 142

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SL+D Y K G + EAR VF+ + ++ V+S +++I GYAQ     EA+ELF +
Sbjct: 143 ENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCR 202

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+   +  +    +S++   +  A ++ GKQ+H++  +        + NS++DMY KCG 
Sbjct: 203 LQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGN 262

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLS 426
           ++ A ++FN MPV+ V++W  ++ GY KHG   E V LF+ M  ++ V+PD V +LAVLS
Sbjct: 263 LNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLS 322

Query: 427 ACSHSGLVEESQEYFSRLCND-KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            CSH GL ++  E F  + N    ++  IEHY C++D LGRAGR++EA  LI+ MP +P+
Sbjct: 323 GCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPT 382

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
            AIW +LL ACRVH +  +G  VG  LL ++ +N  NYV++SN++A AG W +   +R+L
Sbjct: 383 AAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVREL 442

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              K + K  GRSW+E+D+ IH FY  D +HP  E++   + E+  + KE  G+V     
Sbjct: 443 MMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKES-GYVPDQSC 501

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            L+D+ EE KE+ L  HSEKLA+   L+    +   G  +RV KNLR+C DCH F K +S
Sbjct: 502 VLYDVDEEQKEKILLGHSEKLALAFGLI----STSEGVPLRVIKNLRICVDCHNFAKFVS 557

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K+      +RD  RFH   GG+CSCGDYW
Sbjct: 558 KVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 221/409 (54%), Gaps = 8/409 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     +  G ++H  ++K  +   + L+  LI +Y KC  +  A  VFD+M ERNVVSW
Sbjct: 20  CVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSW 79

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA++ G+ Q G A   L LF QM  S  +PNEFT +T + +    S  E G QIH    K
Sbjct: 80  TAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFK 139

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
             +E +  VG+S++DMY+K GRI+EA  +F+ +P + +++  A+I+GY   G  ++ L L
Sbjct: 140 RNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALEL 199

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F ++Q  G   +  T+ S L A   L ++  G Q+H  ++    P+ V  V+  SL+D Y
Sbjct: 200 FCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYV--VLQNSLIDMY 257

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVL 320
            KCG L  AR++F+ +  ++VISW+++++GY++     E ++LF+ +RE + ++ D    
Sbjct: 258 SKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTF 317

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   L ++G ++          ++  + +   ++D+  + G ++EA EL  +M
Sbjct: 318 LAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKM 377

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P +     W  ++     H  +   +G F    L ++EP+      +LS
Sbjct: 378 PFEPTAAIWGSLLGACRVH--SNTNIGEFVGCRLLEIEPENAGNYVILS 424



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 150/280 (53%), Gaps = 8/280 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+     + G Q+H  + K  +   + + + L+DMYAK G ++ A  VF+ + 
Sbjct: 114 FATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LFC++    +  N  T ++ + A   L+++++G Q
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ 233

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++    +  V+ NS+IDMYSKCG +N A ++F+ MP +++I+WNAM+ GY   G 
Sbjct: 234 VHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGK 293

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + + LF+ M+E  ++ PD  TF + L  C   G    G ++   ++  G         
Sbjct: 294 GIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEH 353

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLI 289
            G ++D   + G + EA   F+LI+    + +   W SL+
Sbjct: 354 YGCVIDLLGRAGRVEEA---FELIKKMPFEPTAAIWGSLL 390


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/669 (35%), Positives = 353/669 (52%), Gaps = 66/669 (9%)

Query: 35  HGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           HG +      FDL    D      ++  Y + G +  A  +F+   E +V+SW ALM G+
Sbjct: 19  HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 78

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFE 145
           +Q G       LF +M      P    +S NI  SG       VE         ++  F 
Sbjct: 79  VQWGKMSEARELFDRM------PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 132

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W  VV       Y++ G + EA R+FD MP ++ ++WNAM+A Y+     D+   LF  M
Sbjct: 133 WTAVVSG-----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 187

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
                             C ++ S                     T++ G     Y + G
Sbjct: 188 -----------------PCRNVASW-------------------NTMLTG-----YAQAG 206

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L EA+ VFD + QK  +SW++++  Y+Q     E ++LF ++      V+    + ++ 
Sbjct: 207 MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLS 266

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD A +E G Q+H    +   G+   V N+++ MY KCG +++A   F EM  ++VV+
Sbjct: 267 TCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVS 326

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY +HG  KEA+ +F  M     +PD +  + VL+ACSHSGLVE+   YF  + 
Sbjct: 327 WNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 386

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D  +  + EHY+C++D LGRAGRL EA +L++ MP +P   +W  LL A R+H + ELG
Sbjct: 387 HDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELG 446

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           R   E +  L+ +N   YV++SNI+A +G W +  ++R +   +G+KKV G SW+EV  +
Sbjct: 447 RSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNK 506

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  EKI+  L +++ RMK+  G+V      LHD++EE KE  L+ HSEK
Sbjct: 507 VHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA-GYVSATDMVLHDVEEEEKEHMLKYHSEK 565

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+      G LN  PG+ IRV KNLRVCGDCH   K +S I   + ++RD+ RFH F G
Sbjct: 566 LAVAY----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRG 621

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 622 GSCSCGDYW 630



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 178/386 (46%), Gaps = 68/386 (17%)

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLL-LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
           MP +  +T+N MI     + +++ GL+ L R   +     D  ++   L A    G V  
Sbjct: 1   MPVRDSVTYNVMI-----SSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRV-- 53

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
             +  G L  S   + V  +   +L+  YV+ G + EAR +FD +  + V+SW+ ++ GY
Sbjct: 54  -EEARG-LFNSRTEWDV--ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGY 109

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           A+  ++ EA  LF     R    D F  ++++  +A   ++E+ +++      +P     
Sbjct: 110 ARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEARRVF---DAMPE--RN 160

Query: 353 SVS-NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           +VS N++V  Y++  ++DEA ELFN MP +NV +W  ++TGY + G+ +EA  +F  M  
Sbjct: 161 AVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM-- 218

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG------ 465
              + D V++ A+L+A S  G  EE+ + F  +        R   ++C++ +        
Sbjct: 219 --PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNR-SAFACVLSTCADIAALE 275

Query: 466 -----------------------------RAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
                                        + G +++A+N  E M  +  ++ W T+++  
Sbjct: 276 CGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVS-WNTMIAGY 334

Query: 497 RVHGDLELGREVGEI--LLRLDGDNP 520
             HG    G+E  EI  ++R     P
Sbjct: 335 ARHG---FGKEALEIFDMMRTTSTKP 357



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 2/177 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R   A  L  C+    L+ G+QLHG L++ G+     + N L+ MY KCG M  A   F+
Sbjct: 258 RSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFE 317

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +M ER+VVSW  ++ G+ ++G  K  L +F  M ++S KP++ TL   + A      VE 
Sbjct: 318 EMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEK 377

Query: 132 GMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMI 186
           G+   + M    G    P     +ID+  + GR+ EA  +   MP +   T W A++
Sbjct: 378 GISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/685 (33%), Positives = 378/685 (55%), Gaps = 11/685 (1%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGFSF---DLMLNNDLIDMYAKCGEMNGACAVF 70
           RL + L+ C+ +  L  G  +HG L+    S    D+   N LI++Y KCGE   A  VF
Sbjct: 33  RLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVF 92

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSV 129
           D M ERNVVSW A+M G+  +G     L LF  M  S   +PNEF  +   K+      +
Sbjct: 93  DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRI 152

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G Q HG  +KSG   +  V N+++ MYS C    EA R+ D +P   L  +++ ++GY
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           +  G   +G  + R+M +   + D  T+ S L+ C +L  +    QIH  ++  GF   V
Sbjct: 213 LECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEV 272

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +   +G++++ Y KCG ++ A+RVFD    ++++  ++++  Y Q+++  EA+ LF ++ 
Sbjct: 273 EA--SGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMD 330

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            + +  + +  +  +   A+ +L++ G  +H    K        V N++V+MY K G I+
Sbjct: 331 TKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A + F+ M  +++VTW  +I G+  HGL +E +  F +M++    P+ + ++ VL ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACS 450

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H G VE+   YF++L     ++P ++HY+CIV  L +AG   +A++ + + P++  +  W
Sbjct: 451 HVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           + LL+AC V  +  LG++V E  +    ++   YV++SNIHA +  W     +R L   +
Sbjct: 511 RALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKR 570

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           G+KK  G SW+ +  + H F   ++ HP    I+  + E+  +++  LG+   V    HD
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIR-PLGYSPDVAGVFHD 629

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           + EE +E++L  HSEKLA+   L++   N      + V KN+R+C DCH  IK +SKI K
Sbjct: 630 VDEEQREDNLSYHSEKLAVAYGLMKTPENSP----LYVTKNVRICDDCHSAIKLISKISK 685

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              V+RD+ RFH F  G CSC DYW
Sbjct: 686 RYIVIRDSNRFHHFRDGQCSCCDYW 710


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/563 (38%), Positives = 338/563 (60%), Gaps = 7/563 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           GM  H   ++ G   + +  N +++MYSKCG +  A ++FD MP +SL++WN M+  +  
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  +K L+LF +MQ+ G    EFT +S + AC +   V    Q+HGF + +    +V  
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV-- 183

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +L+D Y KCG + +A  VF+ + ++S ++WSS++ GY Q E   EA+ LF + +  
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            L+ + F +SS +   A  A + +GKQ+ A + K   G +  V +S++DMY KCG+I+EA
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ +  KNVV W  I++G+ +H  + EA+  F KM    + P+ + Y++VLSACSH 
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+ ++YF  +     + P + HYSC+VD LGRAG L EAK+ I+ MP   + ++W +
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 423

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL++CR++ +LEL     + L  ++  N  N+V++SNI+A    W E  R R L +    
Sbjct: 424 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 483

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G+SW+E+  ++H F  G+  HP   +I+  L ++   MK ++G+    ++ LHD++
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK-KIGYKAKTEHDLHDVE 542

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           E  K+E LR HSEKLA+      G +    G  IR+ KNLR+CGDCH F+K  S I +  
Sbjct: 543 ESRKQELLRHHSEKLALTF----GIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITERE 598

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            +VRD  RFH F+ G CSCG++W
Sbjct: 599 IIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 207/375 (55%), Gaps = 12/375 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           VSE Q L   L+  ++N     G+  H  ++++G   D + +N L++MY+KCG +  A  
Sbjct: 47  VSELQHL---LQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 103

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD+M  R++VSW  ++    QNG+ +  L LF QM       +EFT+S+ + A      
Sbjct: 104 LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 163

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V    Q+HG  +K+  + N  VG +++D+Y+KCG + +A  +F+ MP +S +TW++M+AG
Sbjct: 164 VFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAG 223

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           YV     ++ L+LF + Q  G   ++FT +S L AC +  ++  G Q+      +G   +
Sbjct: 224 YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN 283

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  SL+D Y KCG + EA  VF  +E+K+V+ W++++ G+++     EAM  F ++
Sbjct: 284 I--FVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKM 341

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV----PSGLDTSVSNSIVDMYLK 364
           ++  +  +     S++   +   LVE+G++      +V    P+ L  S    +VD+  +
Sbjct: 342 QQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSC---MVDILGR 398

Query: 365 CGLIDEATELFNEMP 379
            GL+ EA +  + MP
Sbjct: 399 AGLLHEAKDFIDRMP 413



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +G   HA   +V    DT  SN +++MY KCGL++ A +LF+EMPV+++V+W  ++  + 
Sbjct: 65  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           ++G  ++A+ LF +M  +          +V+ AC+    V E ++          +   +
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG-FALKTALDSNV 183

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              + ++D   + G + +A  + E MP +  +  W ++++
Sbjct: 184 FVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMVA 222


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/669 (35%), Positives = 352/669 (52%), Gaps = 66/669 (9%)

Query: 35  HGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           HG +      FDL    D      ++  Y + G +  A  +F+   E + +SW ALM G+
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGY 203

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFE 145
           +Q G       LF +M      P    +S NI  SG       VE         ++  F 
Sbjct: 204 VQWGKMSEARELFDRM------PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W  VV       Y++ G + EA R+FD MP ++ ++WNAM+A Y+     D+   LF  M
Sbjct: 258 WTAVVSG-----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
                             C ++ S                     T++ G     Y + G
Sbjct: 313 P-----------------CRNVASW-------------------NTMLTG-----YAQAG 331

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L EA+ VFD + QK  +SW++++  Y+Q     E ++LF ++      V+    + ++ 
Sbjct: 332 MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLS 391

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD A +E G Q+H    +   G+   V N+++ MY KCG +++A   F EM  ++VV+
Sbjct: 392 TCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVS 451

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY +HG  KEA+ +F  M     +PD +  + VL+ACSHSGLVE+   YF  + 
Sbjct: 452 WNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 511

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D  +  + EHY+C++D LGRAGRL EA +L++ MP +P   +W  LL A R+H + ELG
Sbjct: 512 HDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELG 571

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           R   E +  L+ +N   YV++SNI+A +G W +  ++R +   +G+KKV G SW+EV  +
Sbjct: 572 RSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNK 631

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  EKI+  L +++ RMK+  G+V      LHD++EE KE  L+ HSEK
Sbjct: 632 VHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA-GYVSATDMVLHDVEEEEKEHMLKYHSEK 690

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+      G LN  PG+ IRV KNLRVCGDCH   K +S I   + ++RD+ RFH F G
Sbjct: 691 LAVAY----GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRG 746

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 747 GSCSCGDYW 755



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 32/349 (9%)

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +  N  I  + + GR+ +A R+F  MP +S  T+NAM+AGY   G       LFR +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              PD +++ + L A     S+     +   + +     Y+V       ++  +   G +
Sbjct: 98  ---PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-------MISSHANHGLV 147

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR  FDL  +K  +SW+ ++  Y +   + EA  LF    E     D    +++M  +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----WDAISWNALMSGY 203

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
             +  + + +++     ++P G D    N +V  Y + G + EA  LF+  PV++V TWT
Sbjct: 204 VQWGKMSEARELF---DRMP-GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL-CN 446
            +++GY ++G+ +EA  +F  M     E + V++ A+++A     +++E++E F+ + C 
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +      +  ++ ++    +AG L+EAK + ++MP K +++ W  +L+A
Sbjct: 316 N------VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-WAAMLAA 357



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 11/188 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR +F+ V         L  C+    L+ G+QLHG L++ G+     + N L+ MY KC
Sbjct: 381 VNRSAFACV---------LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 431

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A   F++M ER+VVSW  ++ G+ ++G  K  L +F  M ++S KP++ TL   +
Sbjct: 432 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 491

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A      VE G+   + M    G    P     +ID+  + GR+ EA  +   MP +  
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 180 IT-WNAMI 186
            T W A++
Sbjct: 552 STMWGALL 559



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 124/259 (47%), Gaps = 18/259 (6%)

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           + + +   +  +++ G + +A R+F  + ++S  ++++++ GY+    L  A  LFR + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAI- 95

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
               + D +  ++++   A  + +   + +     ++P   D+   N ++  +   GL+ 
Sbjct: 96  ---PRPDNYSYNTLLHALAVSSSLADARGLF---DEMPV-RDSVTYNVMISSHANHGLVS 148

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A   F+  P K+ V+W  ++  Y ++G  +EA GLF        E D +++ A++S   
Sbjct: 149 LARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TEWDAISWNALMSGYV 204

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
             G + E++E F R+         +  ++ +V    R G + EA+ L ++ PV+  +  W
Sbjct: 205 QWGKMSEARELFDRMPGRD-----VVSWNIMVSGYARRGDMVEARRLFDAAPVR-DVFTW 258

Query: 490 QTLLSACRVHGDLELGREV 508
             ++S    +G LE  R V
Sbjct: 259 TAVVSGYAQNGMLEEARRV 277


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/676 (37%), Positives = 360/676 (53%), Gaps = 13/676 (1%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           S++ LL   V  H  L          L N L++MY+K    N A  V      R VV+WT
Sbjct: 20  SRSSLLGRAVHAH-ILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWT 78

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           +L+ G + N    + L  F  M    V PN+FT     KAS  L     G Q+H + +K 
Sbjct: 79  SLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKG 138

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           G   +  VG S  DMYSK G   EA  MFD MP ++L TWNA ++  V  G     +  F
Sbjct: 139 GNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAF 198

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           +K       P+  TF + L AC  + S+  G Q+HGF++ S +   V   +   L+DFY 
Sbjct: 199 KKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS--VFNGLIDFYG 256

Query: 263 KCGCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           KCG +V +  VF  I   +++V+SW SL+    Q      A  +F Q R+     D F++
Sbjct: 257 KCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTD-FMI 315

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           SS++   A+   +E G+ +HA A K     +  V +++VD+Y KCG I+ A ++F EMP 
Sbjct: 316 SSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPE 375

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQ 438
           +N+VTW  +I GY   G    A+ LF++M      +    V  ++VLSACS +G VE   
Sbjct: 376 RNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGL 435

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           + F  +     ++P  EHY+C+VD LGR+G +D A   I+ MP+ P+I++W  LL AC++
Sbjct: 436 QIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKM 495

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG  +LG+   E L  LD D+  N+V+ SN+ A AG W E   +RK  R  G+KK  G S
Sbjct: 496 HGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYS 555

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WV V   +H F   D  H    +I  +L ++   MK+  G+V     +L D++EE K   
Sbjct: 556 WVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKA-GYVPDANLSLFDLEEEEKASE 614

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           +  HSEK+A+   L+        G  IR+ KNLR+C DCH  IK +SKI+    +VRD  
Sbjct: 615 VWYHSEKIALAFGLI----TLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNN 670

Query: 679 RFHRFEGGVCSCGDYW 694
           RFHRF+ G CSC DYW
Sbjct: 671 RFHRFKDGWCSCKDYW 686



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 122/222 (54%), Gaps = 5/222 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LER 76
           L  C+  + L+ G QLHG +V+  +  D+ + N LID Y KCG++  +  VF ++    R
Sbjct: 217 LNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRR 276

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVSW +L+   +QN   +    +F Q     V+P +F +S+ + A   L  +E G  +H
Sbjct: 277 NVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVH 335

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            + +K+  E N  VG++++D+Y KCG I  A ++F  MP ++L+TWNAMI GY   G  D
Sbjct: 336 ALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVD 395

Query: 197 KGLLLFRKMQEH--GEIPDEFTFTSTLKACGSLGSVGGGTQI 236
             L LF++M     G      T  S L AC   G+V  G QI
Sbjct: 396 MALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQI 437



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 10/219 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C++   L+ G  +H   +K     ++ + + L+D+Y KCG +  A  VF +M 
Sbjct: 315 ISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP 374

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
           ERN+V+W A++ G+   G+    LSLF +M  GS  +  +  TL + + A     +VE G
Sbjct: 375 ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERG 434

Query: 133 MQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYV 190
           +QI   M  + G E        ++D+  + G ++ A      MP    I+ W A++    
Sbjct: 435 LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACK 494

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDE----FTFTSTLKACG 225
           + G +  G +   K+ E    PD+      F++ L + G
Sbjct: 495 MHGKTKLGKIAAEKLFELD--PDDSGNHVVFSNMLASAG 531



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 8/217 (3%)

Query: 322 SMMGVFADFALVEQ----GKQIHAYAAKV-PSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
           +++G F + A++ +    G+ +HA+  +   + L + + N +V+MY K  L + A  + +
Sbjct: 8   NLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLS 67

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
               + VVTWT +I+G   +     A+  F  M  + V P+   +  V  A +   +   
Sbjct: 68  LTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVT 127

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++  +       +       S   D   + G   EA+N+ + MP + ++A W   +S  
Sbjct: 128 GKQLHALALKGGNILDVFVGCSAF-DMYSKTGLRPEARNMFDEMPHR-NLATWNAYMSNA 185

Query: 497 RVHGDLELGREVGEILLRLDGD-NPVNYVMMSNIHAD 532
              G         +  L +DG+ N + +    N  AD
Sbjct: 186 VQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/663 (35%), Positives = 371/663 (55%), Gaps = 44/663 (6%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           +Q H   +K GF   L   N LID Y KCG +  A  VFD++  R++V+W +++  +++N
Sbjct: 100 IQSHA--LKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRN 155

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW-NPVV 150
           G +K  + ++ +M    + P+EFT S+  KA   L  V  G + HG  +  G    N  V
Sbjct: 156 GRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFV 215

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G++++DMY+K G++ +A  + D +  K ++ + A+I GY   G   + L +FR M + G 
Sbjct: 216 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 275

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             +E+T +S L  CG+L  +  G  IHG ++ +G                          
Sbjct: 276 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGL------------------------- 310

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
                    +S ++W+S+I+G  Q      A+  FRQ+   S+  + F LSS++   +  
Sbjct: 311 ---------ESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL 361

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A++EQGKQIHA   K    +D  V  +++D Y KCG  + A  +FN +   +VV+   +I
Sbjct: 362 AMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 421

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G   EA+ LF  M    +EP+ V +L VLSAC+++GL+EE    FS   N   +
Sbjct: 422 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI 481

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +   +HY+C+VD LGRAGRL EA+ LI  + +   + IW+TLLSACR+HGD+E+ + V  
Sbjct: 482 ELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMN 540

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            ++ L  ++   +V++SN++A  G+W++   ++   R   LKK    SWV+V++EIH F 
Sbjct: 541 RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFM 600

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP    I + L E+ +++K ELG+V   ++ L D+ EE K  SL  HSEKLA+  
Sbjct: 601 AGDWSHPNFRDIREKLEELIEKVK-ELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAF 659

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL R          IR+ KNLRVCGDCH ++K +SKI+    + RD  RFH F  G+CSC
Sbjct: 660 ALWRSNYKNT---TIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSC 716

Query: 691 GDY 693
           GDY
Sbjct: 717 GDY 719



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 212/461 (45%), Gaps = 88/461 (19%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           + S+ +  +I    +K GF  +  +GN +ID Y KCG +  A ++FD +P + ++ WN+M
Sbjct: 91  IKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSM 148

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IA Y+  G S + + ++++M   G +PDEFTF+S  KA   LG V  G + HG  +  G 
Sbjct: 149 IASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGV 208

Query: 246 PYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
              V  V  GS LVD Y K G + +AR V D +  K V+ +++LI+GY+      E++++
Sbjct: 209 --GVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQV 266

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           FR + ++ ++ + + LSS++    +   +  G+ IH    K  +GL+++           
Sbjct: 267 FRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVK--AGLESA----------- 313

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
                              VTWT +I G  ++G  + A+  FR+ML   + P+     +V
Sbjct: 314 -------------------VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSV 354

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESM-- 480
           L ACS   ++E+ ++  + +    +    I+ Y  + ++D  G+ G  + A+++   +  
Sbjct: 355 LRACSSLAMLEQGKQIHAIVM---KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLE 411

Query: 481 --------------------------------PVKPSIAIWQTLLSACRVHGDLELG--- 505
                                            ++P+   W  +LSAC   G LE G   
Sbjct: 412 VDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHI 471

Query: 506 ----REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
               R  G I L  D     +Y  M ++   AG   E E L
Sbjct: 472 FSSARNSGNIELTKD-----HYACMVDLLGRAGRLKEAEML 507



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+      L+  LR CS   +L+ G Q+H  ++K G   D  +   LID Y KCG    A
Sbjct: 343 SITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 402

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +VF+ +LE +VVS  +++  + QNG     L LF  M  + ++PN  T    + A    
Sbjct: 403 RSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNA 462

Query: 127 SSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
             +E G  I      SG  E        ++D+  + GR+ EA  + + +    ++ W  +
Sbjct: 463 GLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTL 522

Query: 186 IAGYVLAG 193
           ++   + G
Sbjct: 523 LSACRIHG 530


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/564 (38%), Positives = 339/564 (60%), Gaps = 9/564 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           GM  H   ++ G   + +  N +++MYSKCG +  A ++FD MP +SL++WN M+  +  
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  +K L+LF +MQ+ G    EFT +S + AC +   V    Q+HGF + +    +V  
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV-- 156

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +L+D Y KCG + +A  VF+ + ++S ++WSS++ GY Q E   EA+ LF + +  
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            L+ + F +SS +   A  A + +GKQ+ A + K   G +  V +S++DMY KCG+I+EA
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ +  KNVV W  I++G+ +H  + EA+  F KM    + P+ + Y++VLSACSH 
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+ ++YF  +     + P + HYSC+VD LGRAG L EAK+ I+ MP   + ++W +
Sbjct: 337 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 396

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL++CR++ +LEL     + L  ++  N  N+V++SNI+A    W E  R R L +    
Sbjct: 397 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 456

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G+SW+E+  ++H F  G+  HP   +I+  L ++   MK ++G+    ++ LHD++
Sbjct: 457 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK-KIGYKAKTEHDLHDVE 515

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQP-GKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           E  K+E LR HSEKLA+       G+   P G  IR+ KNLR+CGDCH F+K  S I + 
Sbjct: 516 ESRKQELLRHHSEKLALTF-----GIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITER 570

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD  RFH F+ G CSCG++W
Sbjct: 571 EIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 207/375 (55%), Gaps = 12/375 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           VSE Q L   L+  ++N     G+  H  ++++G   D + +N L++MY+KCG +  A  
Sbjct: 20  VSELQHL---LQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 76

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD+M  R++VSW  ++    QNG+ +  L LF QM       +EFT+S+ + A      
Sbjct: 77  LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 136

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V    Q+HG  +K+  + N  VG +++D+Y+KCG + +A  +F+ MP +S +TW++M+AG
Sbjct: 137 VFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAG 196

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           YV     ++ L+LF + Q  G   ++FT +S L AC +  ++  G Q+      +G   +
Sbjct: 197 YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN 256

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  SL+D Y KCG + EA  VF  +E+K+V+ W++++ G+++     EAM  F ++
Sbjct: 257 I--FVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKM 314

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV----PSGLDTSVSNSIVDMYLK 364
           ++  +  +     S++   +   LVE+G++      +V    P+ L  S    +VD+  +
Sbjct: 315 QQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSC---MVDILGR 371

Query: 365 CGLIDEATELFNEMP 379
            GL+ EA +  + MP
Sbjct: 372 AGLLHEAKDFIDRMP 386



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +G   HA   +V    DT  SN +++MY KCGL++ A +LF+EMPV+++V+W  ++  + 
Sbjct: 38  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           ++G  ++A+ LF +M  +          +V+ AC+    V E ++          +   +
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG-FALKTALDSNV 156

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              + ++D   + G + +A  + E MP +  +  W ++++
Sbjct: 157 FVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMVA 195


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/752 (32%), Positives = 392/752 (52%), Gaps = 83/752 (11%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +L+S+  R A S   C      +   QL G   K  F  D  +   L+DM+ +CG ++ A
Sbjct: 123 TLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 182

Query: 67  CAVFDK-------------------------------MLERNVVSWTALMCGFLQNGNAK 95
             +F +                               M ER+VVSW  ++    Q+G  +
Sbjct: 183 SRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR 242

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             L L  +M    V+ +  T ++++ A   L S+  G Q+H   ++S  + +P V +++I
Sbjct: 243 EALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALI 302

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           ++Y+KCG   EA R+F+ +  ++ ++W  +I G +      K + LF +M+      D+F
Sbjct: 303 ELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQF 362

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
              + +  C +   +  G Q+H   + SG   ++  V++ SL+  Y KCG L  A  VF 
Sbjct: 363 ALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFS 420

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL---------------QVDGFVL 320
            + ++ ++SW+S+I  Y+Q  N+ +A E F  +  R+                + DG  +
Sbjct: 421 SMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKM 480

Query: 321 SSMM--------------GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
            S M               +F   AD    + G QI  +  K    L+ SV+N+ + MY 
Sbjct: 481 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 540

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG I EA +LF+ +  K+VV+W  +ITGY +HG+ K+A   F  ML    +PD ++Y+A
Sbjct: 541 KCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 600

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VLS CSHSGLV+E + YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+K
Sbjct: 601 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 660

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P+  +W  LLSAC++HG+ EL     + +  LD  +  +Y++++ I++DAG  ++  ++R
Sbjct: 661 PTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVR 720

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
           KL R KG+KK  G SW+EV+ ++H F   D +HP    I   + E+ +++   LG+V   
Sbjct: 721 KLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIA-HLGYV--- 776

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIK 662
                  + ES    +  HSEKLA+       G+   P  + I + KNLR+CGDCH  IK
Sbjct: 777 -------RTESPRSEIH-HSEKLAVAF-----GIMSLPAWMPIHIMKNLRICGDCHTVIK 823

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +S +    FV+RD  RFH F+ G CSCGDYW
Sbjct: 824 LISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 254/565 (44%), Gaps = 88/565 (15%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD- 71
           Q LAD+LR C     L     LHG LV +G +  + L N L+  Y  CG ++ A  +   
Sbjct: 21  QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA 80

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG------V 125
            + E NV++   +M G+ + G+      LF +M    V      +S   + +G       
Sbjct: 81  DIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGA 140

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM--------------- 170
           L   E   Q+ G+  K  F  +P V  +++DM+ +CG ++ A+R+               
Sbjct: 141 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 200

Query: 171 ----------------FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                           F+ M  + +++WN MIA    +G   + L L  +M   G   D 
Sbjct: 201 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 260

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T+TS+L AC  L S+G G Q+H  +I S  P  +   +A +L++ Y KCG   EA+RVF
Sbjct: 261 TTYTSSLTACARLFSLGWGKQLHAKVIRS-LP-QIDPYVASALIELYAKCGSFKEAKRVF 318

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM-GVFADFALV 333
           + ++ ++ +SW+ LI G  Q E  ++++ELF Q+R   + +D F L++++ G F    L 
Sbjct: 319 NSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLC 378

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
             G+Q+H+   K        VSNS++ +Y KCG +  A  +F+ M  +++V+WT +IT Y
Sbjct: 379 -LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437

Query: 394 G-------------------------------KHGLAKEAVGLFRKMLLD-DVEPDGVAY 421
                                           +HG  ++ + ++  ML   DV PD V Y
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497

Query: 422 LAVLSACSHSGLVEESQEYFSR------LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           + +   C+  G  +   +          + N       I  YS       + GR+ EA+ 
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS-------KCGRISEAQK 550

Query: 476 LIESMPVKPSIAIWQTLLSACRVHG 500
           L + +  K  ++ W  +++    HG
Sbjct: 551 LFDLLNGKDVVS-WNAMITGYSQHG 574


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 367/662 (55%), Gaps = 49/662 (7%)

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           ++VVSW AL+ G+ QNG A   + +F  M S  ++P+   +   + AS  L   +  + +
Sbjct: 301 KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL 360

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG  ++SGF  N  VG S+I++YSKCG + +A ++F  M  + ++ W++MIA Y + G  
Sbjct: 361 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRG 420

Query: 196 DKGLLLFRKM-QEHGEIPD--EFTFTSTLKACGSLGSVGGGTQI---------------- 236
            + L +F +M Q    I    + +    ++   ++ S    T I                
Sbjct: 421 GEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWL 480

Query: 237 -HGFLITSGFPYSVKTVIAGSLVDF---------------YVKCGCLVEARRVFDLIEQK 280
            H + I   +P+    +   ++  +               YV    +  A  VF+ I   
Sbjct: 481 GHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNP 540

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF--------VLSSMMGVFADFAL 332
               W+ +I G+A +     ++EL+ ++ E+ L+ D          +LS ++    +   
Sbjct: 541 CSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLAC-GNLGA 599

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           + +G+  H+Y  +     D  V+ +I+DMY KCG +D A  LF+E   K++V W+ +I  
Sbjct: 600 LRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIAS 659

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG  ++A+ LF +M+   V P  V +  VLSACSHSGL+EE + YF  +  +  +  
Sbjct: 660 YGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIAR 719

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++ +Y+C+VD LGRAG+L EA +LIE+MPV+P  +IW +LL ACR+H +L+L  ++ + L
Sbjct: 720 KLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 779

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             LD  +   +V++SNI+A    WNE E++RK+   +G  K+ G S VE D ++H F  G
Sbjct: 780 FHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVG 839

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP  EK++  L E+   MK  LG+V    + LHDI+EE+KE +L  HSE+LAI   L
Sbjct: 840 DRSHPQWEKLYAKLEELAAPMK-HLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGL 898

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    N  PG  +R+ KNLR+CGDCH  IK +SKI+  V +VRD  RFHRFE GVCSCGD
Sbjct: 899 I----NTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGD 954

Query: 693 YW 694
           YW
Sbjct: 955 YW 956



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 219/501 (43%), Gaps = 98/501 (19%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           RQ L D  + C+    +    QLH  + K G   D      L  +YAKC  +  A  VFD
Sbjct: 4   RQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLF----CQMGSSSVKPNEFTLSTNIKASGVLS 127
           +    NV  W + +  + +    +  L LF    C  G +   P+ FT+   +KA   L 
Sbjct: 61  ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEA---PDNFTIPIALKACAGLR 117

Query: 128 SVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +E G  IHG   K+     +  VG++++++YSKCG++ EA ++F+       + W +M+
Sbjct: 118 MLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMV 177

Query: 187 AGYVLAGYSDKGLLLFRKMQE----HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            GY      ++ L LF +M       G++P                              
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCFDGDLP------------------------------ 207

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
                     +  SL++ Y K GC   A  +F  + +K VISWS++I  YA  E   EA+
Sbjct: 208 ----------LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEAL 257

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            LF ++ E+  + +   + S +   A    +E+GK+IH  A                   
Sbjct: 258 NLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV------------------ 299

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
                             K+VV+W  +++GY ++G+A +++G+FR ML D ++PD VA +
Sbjct: 300 -----------------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVV 342

Query: 423 AVLSACSHSGLVEES---QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            +L+A S  G+ +++     Y  R          +   + +++   + G L +A  L + 
Sbjct: 343 KILAASSELGIFQQALCLHGYVVR----SGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 398

Query: 480 MPVKPSIAIWQTLLSACRVHG 500
           M V+  + IW ++++A  +HG
Sbjct: 399 MIVR-DVVIWSSMIAAYGIHG 418



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 180/394 (45%), Gaps = 72/394 (18%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           +L+ C+   +L+ G  +HG   K      D+ + + L+++Y+KCG+M  A  VF++    
Sbjct: 109 ALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP 168

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           + V WT+++ G+ QN + +  L+LF QM                                
Sbjct: 169 DTVLWTSMVTGYQQNNDPEEALALFSQM-------------------------------- 196

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              M   F+ +  + NS++++Y+K G    AA +F  MP K +I+W+ MIA Y     ++
Sbjct: 197 --VMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 254

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF +M E    P+  T  S L+AC    ++  G +IH   +               
Sbjct: 255 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV--------------- 299

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
                                  K V+SW +L+ GYAQ     ++M +FR +    +Q D
Sbjct: 300 ----------------------WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 337

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              +  ++   ++  + +Q   +H Y  +     +  V  S++++Y KCG + +A +LF 
Sbjct: 338 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 397

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
            M V++VV W+ +I  YG HG   EA+ +F +M+
Sbjct: 398 GMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMI 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 218/506 (43%), Gaps = 91/506 (17%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           F  DL L N L+++YAK G    A  +F KM E++V+SW+ ++  +  N  A   L+LF 
Sbjct: 202 FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFH 261

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M     +PN  T+ + ++A  V  ++E G +IH + +     W                
Sbjct: 262 EMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV-----W---------------- 300

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
                         K +++W A+++GY   G + K + +FR M   G  PD       L 
Sbjct: 301 --------------KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 346

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           A   LG       +HG+++ SGF  +V   +  SL++ Y KCG L +A ++F  +  + V
Sbjct: 347 ASSELGIFQQALCLHGYVVRSGFNSNV--FVGASLIELYSKCGSLGDAVKLFKGMIVRDV 404

Query: 283 ISWSSLILGYAQEENLAEAMELFRQL----------RERSLQ------------------ 314
           + WSS+I  Y       EA+E+F Q+           + S+Q                  
Sbjct: 405 VIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHI 464

Query: 315 ---VDGFVLSS---MMGVFAD------FALVEQGK-QIHAYAAKVPSGLDTSVSNSIVDM 361
              V  F + +    +G F +      F   +  K  I AY  +     D+ +      M
Sbjct: 465 PWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQ----YDSRILTKFAIM 520

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG--- 418
           Y+    ID A+ +F ++P      W V+I G+   G    ++ L+ KM+   ++PD    
Sbjct: 521 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGV 580

Query: 419 ----VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
               V+ L+VL AC + G + +  E+F         +  I   + I+D   + G LD A+
Sbjct: 581 IPNRVSILSVLLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 639

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHG 500
            L +    K  +  W  ++++  +HG
Sbjct: 640 CLFDETAGK-DLVCWSAMIASYGIHG 664



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 51/395 (12%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LHG +V+ GF+ ++ +   LI++Y+KCG +  A  +F  M+ R+VV W++++  +  +G 
Sbjct: 360 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 419

Query: 94  AKACLSLFCQM-----GSSSVKPNEFTLSTNIKASGVLSSVENGMQI----HGMCMKSGF 144
               L +F QM     G +S    + ++   ++    ++S      I        M++ F
Sbjct: 420 GGEALEIFDQMIQVMQGITSCY--QISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHF 477

Query: 145 EW-------NPVVGNSIID-----------------------MYSKCGRINEAARMFDVM 174
            W        P       D                       MY    RI+ A+ +F+ +
Sbjct: 478 RWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDI 537

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH-------GEIPDEFTFTSTLKACGSL 227
           P      WN MI G+   G     L L+ KM E        G IP+  +  S L ACG+L
Sbjct: 538 PNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNL 597

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G   H ++I +GF + +  ++A +++D Y KCG L  AR +FD    K ++ WS+
Sbjct: 598 GALRKGEWFHSYVIQTGFEFDI--LVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 655

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAAKV 346
           +I  Y    +  +A++LF Q+ +  ++      + ++   +   L+E+GK        + 
Sbjct: 656 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 715

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
                 S    +VD+  + G + EA +L   MPV+
Sbjct: 716 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 750



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 15/259 (5%)

Query: 42  GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF 101
           G  +D  +      MY     ++ A  VF+ +       W  ++ GF  +G   + L L+
Sbjct: 506 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565

Query: 102 CQM-------GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSI 154
            +M        +S V PN  ++ + + A G L ++  G   H   +++GFE++ +V  +I
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625

Query: 155 IDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
           +DMYSKCG ++ A  +FD    K L+ W+AMIA Y + G+  K + LF +M + G  P  
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSH 685

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            TFT  L AC   G +  G +++  L+T  F  + K      +VD   + G L EA    
Sbjct: 686 VTFTCVLSACSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEA---V 741

Query: 275 DLIEQKSVIS----WSSLI 289
           DLIE   V      W SL+
Sbjct: 742 DLIENMPVEPDASIWGSLL 760



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 16/302 (5%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
            +AC +  SV   +Q+H  +  +G  +   T  A  L   Y KC  L  AR+VFD     
Sbjct: 11  FQACNNGRSV---SQLHSQVFKTGILHD--TFFATKLNSLYAKCASLQAARKVFDETPHP 65

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFVLSSMMGVFADFALVEQGKQI 339
           +V  W+S +  Y +E+   E + LF  +   + +  D F +   +   A   ++E GK I
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 340 HAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           H +A K    G D  V +++V++Y KCG + EA ++F E    + V WT ++TGY ++  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNND 185

Query: 399 AKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
            +EA+ LF +M ++D  + D     ++L+  + +G  + +   FS++     +      +
Sbjct: 186 PEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS-----W 240

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVK---PSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           S ++         +EA NL   M  K   P+     + L AC V  +LE G+++ +I + 
Sbjct: 241 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW 300

Query: 515 LD 516
            D
Sbjct: 301 KD 302



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++  R  +   L  C     L  G   H  +++ GF FD+++   ++DMY+KCG ++ A 
Sbjct: 580 VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 639

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD+   +++V W+A++  +  +G+ +  + LF QM  + V+P+  T +  + A     
Sbjct: 640 CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 699

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK 177
            +E G +++   M   F     + N   ++D+  + G+++EA  + + MP +
Sbjct: 700 LLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 750


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/674 (35%), Positives = 377/674 (55%), Gaps = 11/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C        G ++H  +++ GF  ++ + N L+ MYAKCG++  A  VFD M   + 
Sbjct: 204 LRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDC 263

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G  +N   +A L LF  M  + V+PN  T+++   ASG+LS V    ++HG 
Sbjct: 264 ISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGF 323

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  +    NS+I MY+  GR+ +A ++F  M  K  ++W AMI+GY   G+ DK 
Sbjct: 324 AVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKA 383

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L ++  M+ H   PD+ T  S L AC  LG +  G ++H      GF   V  V+A +L+
Sbjct: 384 LEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV--VVANALL 441

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K   + +A  VF  + +K V+SWSS+I G+       EA+  FR +    ++ +  
Sbjct: 442 EMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSV 500

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              + +   A    +  GK+IHAY  +   G +  V N+++D+Y+KCG    A   F+  
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVH 560

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W ++++G+  HGL   A+ LF +M+     PD V ++A+L ACS +G+V +  
Sbjct: 561 SEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGW 620

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E F  +     + P ++HY+C+VD L R G+L EA NLI  MP+KP  A+W  LL+ CR+
Sbjct: 621 ELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRI 680

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H  +ELG    +++L L+ ++   +V++ +++ DAG W +  R+RK  R KGL++  G S
Sbjct: 681 HRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCS 740

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV    H F   D++HP  ++I+ VL  + +RMK   GF      +L D +E S+++ 
Sbjct: 741 WVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK-ACGF--APVESLED-KEVSEDDI 796

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+   L+    N  PG  I V KN   C  CH   K +S+I++    VRD  
Sbjct: 797 LCGHSERLAVAFGLI----NTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTK 852

Query: 679 RFHRFEGGVCSCGD 692
           + H F+ G CSCGD
Sbjct: 853 QLHCFKDGDCSCGD 866



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 219/421 (52%), Gaps = 3/421 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            R C     +D G++          SF L L N ++ M  + GE+  A  VF KM ER+V
Sbjct: 103 FRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDV 162

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++ G+ + G  +  L L+ +M  + ++P+ +T    ++  G +     G ++H  
Sbjct: 163 FSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAH 222

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++ GF     V N+++ MY+KCG I  A ++FD M     I+WNAMIAG+      + G
Sbjct: 223 VLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAG 282

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M E+   P+  T TS   A G L  VG   ++HGF +  GF  ++      SL+
Sbjct: 283 LELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGF--AIDVAFCNSLI 340

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y   G + +A ++F  +E K  +SW+++I GY +     +A+E++  +   ++  D  
Sbjct: 341 QMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDV 400

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S +   A    ++ G ++H  A          V+N++++MY K   ID+A E+F  M
Sbjct: 401 TIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM 460

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W+ +I G+  +  + EA+  FR M L  V+P+ V ++A LSAC+ +G +   +
Sbjct: 461 AEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGK 519

Query: 439 E 439
           E
Sbjct: 520 E 520



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 4/174 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+    L  G ++H  +++ G   +  + N L+D+Y KCG+ + A A F    E++
Sbjct: 505 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKD 564

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW  ++ GF+ +G     LSLF QM      P+E T    + A      V  G ++  
Sbjct: 565 VVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFH 624

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M M   F   P + +   ++D+ S+ G++ EA  + + MP K     W A++ G
Sbjct: 625 M-MTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/701 (35%), Positives = 385/701 (54%), Gaps = 28/701 (3%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVF 70
           Q  A     C++   L +G+ LH  ++    +   D+ L N +I+MY KCG +  A  VF
Sbjct: 91  QTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVF 150

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M  RN+VSWTAL+ G  Q+G  + C SLF  +  +  +PNEF  ++ + A      ++
Sbjct: 151 DQMSHRNIVSWTALISGHAQSGLVRECFSLFSGL-LAHFRPNEFAFASLLSACEE-HDIK 208

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--------CGRINEAARMFDVMPAKSLITW 182
            GMQ+H + +K   + N  V NS+I MYSK            ++A  MF  M  ++L++W
Sbjct: 209 CGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSW 268

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS---TLKACGSLGSVGGGT----Q 235
           N+MIA + L G  DK + LF  M  +G   D  T  S   +L  CG+   +        Q
Sbjct: 269 NSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQ 328

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV-EARRVF-DLIEQKSVISWSSLILGYA 293
           +H   I SG    ++ V A  L+  Y   G  + +  R+F D   Q  ++SW++LI  +A
Sbjct: 329 LHCLTIKSGLISEIEVVTA--LIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFA 386

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
            E +  +A  LF QL  +S   D +  S  +   A F   +    IH+   K     DT 
Sbjct: 387 -ERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTV 445

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           + N+++  Y +CG +  + ++FNEM   ++V+W  ++  Y  HG AK+A+ LF++M   +
Sbjct: 446 LCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM---N 502

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           V PD   ++A+LSACSH GLV+E  + F+ + +D  + P+++HYSC+VD  GRAG++ EA
Sbjct: 503 VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEA 562

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
           + LI  MP+KP   IW +LL +CR HG+  L +   +    L+ +N + YV MSNI++  
Sbjct: 563 EELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSG 622

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           GS+ +   +R       ++K  G SWVE+ K++H F  G   HP    I   L  +  ++
Sbjct: 623 GSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQL 682

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           K E+G+V  +  AL+D + E KE+ L  HSEK+A+  A++  G     G VI++ KN+R+
Sbjct: 683 K-EMGYVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGSLPCGGNVIKIMKNIRI 741

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           C DCH F+K  S + +   VVRD+ RFHRF+   CSC DYW
Sbjct: 742 CVDCHNFMKLASYLFQKEIVVRDSNRFHRFKYATCSCNDYW 782


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/677 (32%), Positives = 363/677 (53%), Gaps = 42/677 (6%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKP 111
           ++  + +    + A  VFD+   R    WT  + G  + G     +  F +M       P
Sbjct: 51  VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           N F L+  ++    +  VE+G ++HG  +++G   + V+ N+++DMY+KCG+   A R+F
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170

Query: 172 DVM-------------------------------PAKSLITWNAMIAGYVLAGYSDKGLL 200
             M                               P +   +WN +I+G + +G++   L 
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALS 230

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
             R+M + G + + +T+++     G L     G Q+HG ++ +         +  SL+D 
Sbjct: 231 HLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAAL--EGDAFVRSSLMDM 288

Query: 261 YVKCGCLVEARRVFD---LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           Y KCG L  A  VFD    + +    +WS+++ GY Q     EA++LFR++    +  D 
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L+S+    A+  +VEQG+Q+H    K+   LD  ++++IVDMY KCG +++A  +F+ 
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              KN+  WT ++  Y  HG  + A+ LF +M  + + P+ +  + VLSACSH GLV E 
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           + YF ++  +  + P IEHY+CIVD  GR+G LD+AKN IE   +     +W+TLLSACR
Sbjct: 469 ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACR 528

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H   E  +   E L++L+  +  +YVM+SNI+A    W++   LR   + + ++K  GR
Sbjct: 529 LHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGR 588

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+ +   +H F  GD +HP + +I+  L ++ +R+K E+G+       +HD+++E +E 
Sbjct: 589 SWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLK-EIGYTSRTDLVVHDVEDEQRET 647

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L+ HSEKLAI   ++    +   G  +R+FKNLRVC DCHE IK +S       VVRD 
Sbjct: 648 ALKFHSEKLAIAFGII----STPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDL 703

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+   CSC D+W
Sbjct: 704 YRFHHFKDASCSCEDFW 720



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 203/421 (48%), Gaps = 44/421 (10%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +RCC+    ++ G ++HG +++ G   D++L N ++DMYAKCG+   A  VF  M 
Sbjct: 115 LAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA 174

Query: 75  ERNVVSWT-------------------------------ALMCGFLQNGNAKACLSLFCQ 103
           ER+ VSW                                 ++ G +++G+A   LS   +
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  + V  N +T ST    +G+L   + G Q+HG  + +  E +  V +S++DMY KCG 
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294

Query: 164 INEAARMFD---VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           +  AA +FD    +       W+ M+AGYV  G  ++ L LFR+M   G   D FT TS 
Sbjct: 295 LEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
             AC ++G V  G Q+HG        Y +   +A ++VD Y KCG L +AR +FD    K
Sbjct: 355 AAACANVGMVEQGRQVHG--CVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTK 412

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG---- 336
           ++  W+S++  YA       A+ELF ++    +  +   L  ++   +   LV +G    
Sbjct: 413 NIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYF 472

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN-VVTWTVIITGYGK 395
           KQ+      VPS       N IVD+Y + GL+D+A     E  + +  + W  +++    
Sbjct: 473 KQMQEEYGIVPS---IEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRL 529

Query: 396 H 396
           H
Sbjct: 530 H 530



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 193/407 (47%), Gaps = 44/407 (10%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P    S++  + +  R ++A  +FD  P ++   W   I+G    G    G+  F +M  
Sbjct: 45  PHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLA 104

Query: 208 HGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            GE  P+ F   + ++ C  +G V  G ++HG+++ +G    V  V+  +++D Y KCG 
Sbjct: 105 EGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDV--VLCNAVLDMYAKCGQ 162

Query: 267 LVEARRVFDLIEQKSVI-------------------------------SWSSLILGYAQE 295
              ARRVF  + ++  +                               SW+++I G  + 
Sbjct: 163 FERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRS 222

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            + A+A+   R++ +  +  + +  S+   +     L + G+Q+H          D  V 
Sbjct: 223 GHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVR 282

Query: 356 NSIVDMYLKCGLIDEATELFNEM-PVKNVV--TWTVIITGYGKHGLAKEAVGLFRKMLLD 412
           +S++DMY KCGL++ A  +F+   P+   +   W+ ++ GY ++G  +EA+ LFR+ML +
Sbjct: 283 SSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLRE 342

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLD 471
            V  D     +V +AC++ G+VE+ ++     C +K   K      S IVD   + G L+
Sbjct: 343 GVAADRFTLTSVAAACANVGMVEQGRQVHG--CVEKLWYKLDAPLASAIVDMYAKCGNLE 400

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
           +A+++ +    K +IA+W ++L +   HG    GR   E+  R+  +
Sbjct: 401 DARSIFDRACTK-NIAVWTSMLCSYASHGQ---GRIAIELFERMTAE 443



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 101/201 (50%), Gaps = 4/201 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           + ++R  L      C+   +++ G Q+HG + K+ +  D  L + ++DMYAKCG +  A 
Sbjct: 344 VAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDAR 403

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           ++FD+   +N+  WT+++C +  +G  +  + LF +M +  + PNE TL   + A   + 
Sbjct: 404 SIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVG 463

Query: 128 SVENGMQIHGMCMKSGFEWNPVVG--NSIIDMYSKCGRINEAARMFDVMPAK-SLITWNA 184
            V  G +++   M+  +   P +   N I+D+Y + G +++A    +        I W  
Sbjct: 464 LVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKT 522

Query: 185 MIAGYVLAGYSDKGLLLFRKM 205
           +++   L  +++   L   K+
Sbjct: 523 LLSACRLHQHNEYAKLASEKL 543


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/640 (35%), Positives = 360/640 (56%), Gaps = 31/640 (4%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W  ++  +  +G  +  L+ F  + S  + P+     + ++AS +         +H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCG----------------------RINEAARMFDVMPA 176
            ++ GF ++    N++++MYSK                        +I+   ++FD MP 
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + +++WN +IAG    G  ++ L + ++M +    PD FT +S L       +V  G +I
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG+ I  GF   V   I  SL+D Y KC  +  +   F L+  +  ISW+S+I G  Q  
Sbjct: 222 HGYAIRHGFDKDV--FIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              + +  FR++ +  ++      SS++   A    +  GKQ+HAY  ++    +  +++
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS 339

Query: 357 SIVDMYLKCGLIDEATELFN--EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           S++DMY KCG I  A  +FN  EM  +++V+WT II G   HG A +AV LF +ML+D V
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV 399

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P  VA++AVL+ACSH+GLV+E  +YF+ +  D  + P +EHY+ + D LGRAGRL+EA 
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAY 459

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           + I +M  +P+ ++W TLL+ACR H ++EL  +V   +L +D  N   +V+MSNI++ A 
Sbjct: 460 DFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQ 519

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W +  +LR   R  GLKK    SW+EV  ++H F  GD +HP  +KI++ L  + ++M+
Sbjct: 520 RWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQME 579

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           +E G+V      LHD+ EE K + LR HSE+LAI      G ++   G  IRV KN+RVC
Sbjct: 580 KE-GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAF----GIISTTSGTTIRVIKNIRVC 634

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  IK ++KI+    +VRD +RFH F+ G CSCGDYW
Sbjct: 635 VDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 231/452 (51%), Gaps = 38/452 (8%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG--- 61
           SF +  +R      LR  +     +    LH A++++GF FDL   N L++MY+K     
Sbjct: 69  SFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHL 128

Query: 62  -------------------EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
                              +++    +FD+M  R+VVSW  ++ G  QNG  +  L++  
Sbjct: 129 SPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVK 188

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +MG  +++P+ FTLS+ +      ++V  G +IHG  ++ GF+ +  +G+S+IDMY+KC 
Sbjct: 189 EMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCT 248

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           ++  +   F ++  +  I+WN++IAG V  G  D+GL  FR+M +    P + +F+S + 
Sbjct: 249 QVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIP 308

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE--QK 280
           AC  L ++  G Q+H ++I  GF       IA SL+D Y KCG +  AR +F+ IE   +
Sbjct: 309 ACAHLTALNLGKQLHAYIIRLGF--DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDR 366

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            ++SW+++I+G A   +  +A+ LF ++    ++       +++   +   LV++G +  
Sbjct: 367 DMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYF 426

Query: 341 AYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM---PVKNVVTWTVIITGYG 394
               +   V  GL+     ++ D+  + G ++EA +  + M   P  +V  W+ ++    
Sbjct: 427 NSMQRDFGVAPGLEHYA--AVADLLGRAGRLEEAYDFISNMGEEPTGSV--WSTLLAACR 482

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            H   + A  +  K+LL  V+P  +    ++S
Sbjct: 483 AHKNIELAEKVVNKILL--VDPGNMGAHVIMS 512


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/621 (35%), Positives = 363/621 (58%), Gaps = 21/621 (3%)

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             L+    + GN    L    Q+ S    P + T    I +    +S+  G+ +H   + 
Sbjct: 51  NPLIQSLCKQGNLNQAL----QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G + +P +   +I+MYS+   I+ A ++FD    +++  WNA+     LAGY  + L L
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           +R+M   G   D FT+T  LKAC +    +  +  G +IHG ++  GF   V   I  +L
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVH--IMTTL 224

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ--LRERSLQV 315
           +D Y + GC++ A RVFD +  K+V+SWS++I  Y++     EA+ELFR+  L  + L  
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLP 284

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATE 373
           +   + S++   A  A +EQGK +H Y  +   GLD+   V +++V +Y +CG ++    
Sbjct: 285 NSVTMVSVLQACAALAALEQGKLMHGYILR--RGLDSILPVVSALVTVYARCGNLELGHR 342

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F  M  ++VV+W  +I+ YG HG  ++A+ +F++M+   + P  +++++VL ACSH+GL
Sbjct: 343 VFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGL 402

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           VEE +  F  +    ++ P +EHY+C+VD LGRA RLDEA  +I+ M ++P   +W +LL
Sbjct: 403 VEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLL 462

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            +CR+H ++EL       L  L+  N  NYV++++I+A+A  WNE +R++ L  ++GL+K
Sbjct: 463 GSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQK 522

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
           V GRS +E+ ++I+ F   D+ +P  E++H +L+++   MKE+ G+V   K  L+D+  E
Sbjct: 523 VPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEK-GYVPDTKVVLYDLDPE 581

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KE  +  HSEKLA+   L+    N + G+ IR+ KNLR+C DCH   K +SK      +
Sbjct: 582 EKERIVLGHSEKLALAFGLI----NSKKGETIRITKNLRLCEDCHSVTKFISKFANREIL 637

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD  RFH F+ GVCSCGDYW
Sbjct: 638 VRDVNRFHLFQDGVCSCGDYW 658



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 199/368 (54%), Gaps = 11/368 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C++   L  G+ LH  L+  G   D  L   LI+MY++   ++ A  VFDK  +R +  W
Sbjct: 88  CTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVW 147

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIHG 137
            AL       G  +  L L+ +M    V  + FT +  +KA       +S + NG +IHG
Sbjct: 148 NALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHG 207

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ GFE +  +  +++DMY++ G +  A+R+FD MP K++++W+AMIA Y   G   +
Sbjct: 208 HILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLE 267

Query: 198 GLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            L LFRKM  +    +P+  T  S L+AC +L ++  G  +HG+++  G   S+  V++ 
Sbjct: 268 ALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD-SILPVVS- 325

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV  Y +CG L    RVF+ +E++ V+SW+SLI  Y       +A+++F+++ ++ L  
Sbjct: 326 ALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSP 385

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
                 S++G  +   LVE+GK +     +    +  SV +   +VD+  +   +DEA +
Sbjct: 386 SPISFVSVLGACSHAGLVEEGKVLFESMVR-GHKIFPSVEHYACMVDLLGRANRLDEAAK 444

Query: 374 LFNEMPVK 381
           + ++M ++
Sbjct: 445 IIDDMRIE 452



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 159/300 (53%), Gaps = 18/300 (6%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKN-----LLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           MNR+     S+R      L+ C  +     LLL+ G ++HG +++ GF   + +   L+D
Sbjct: 170 MNRIGVP--SDRFTYTYVLKACVASEAFVSLLLN-GREIHGHILRHGFEGHVHIMTTLLD 226

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNE 113
           MYA+ G +  A  VFD+M  +NVVSW+A++  + +NG     L LF +M   +  + PN 
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
            T+ + ++A   L+++E G  +HG  ++ G +    V ++++ +Y++CG +    R+F+ 
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           M  + +++WN++I+ Y + G+  K + +F++M + G  P   +F S L AC   G V  G
Sbjct: 347 MEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEG 406

Query: 234 TQIHGFLITSG--FPYSVKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLI 289
             +   ++     FP SV+      +VD   +   L EA ++ D   IE    + W SL+
Sbjct: 407 KVLFESMVRGHKIFP-SVEHY--ACMVDLLGRANRLDEAAKIIDDMRIEPGPKV-WGSLL 462


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/673 (35%), Positives = 371/673 (55%), Gaps = 9/673 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L  G ++H  +++ G   ++ + N L+ MYAKCG++  A  VFD M   + 
Sbjct: 202 LRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDC 261

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G  +N   +A L LF  M    V+PN  T+++   ASG+LS ++   +IH +
Sbjct: 262 ISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHAL 321

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  +    NS+I MYS  GR+ EA  +F  M  +  ++W AMI+GY   G+ DK 
Sbjct: 322 AVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKA 381

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L ++  M+ +   PD+ T  S L AC SLG +  G ++H    + GF   +  V+A +LV
Sbjct: 382 LEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI--VVANALV 439

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K   + +A  VF  +  K VISWSS+I G+       EA+  FR +    ++ +  
Sbjct: 440 EMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSV 498

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              + +   A    +  GK+IHA+  +     +  V N+++D+Y+KCG    A   F   
Sbjct: 499 TFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAH 558

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W +++ G+  HG    A+  F +ML     PD V ++A+L  CS +G+V +  
Sbjct: 559 GTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGW 618

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E F  +     + P ++HY+C+VD L R GRL E  N I  MP+ P  A+W  LL+ CR+
Sbjct: 619 ELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRI 678

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++ELG    +I+L L+ ++   +V++S+++ADAG W E  ++RK  R KGL+   G S
Sbjct: 679 HRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCS 738

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV   IH F   D++HP  ++I+ VL  + +RMK   GF     Y+L D +E SK++ 
Sbjct: 739 WVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKAS-GFAPVESYSLED-KEVSKDDV 796

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L  HSE+LA+   L+    N  PG  I V KN   C  CH  ++ +SKI++    VRD  
Sbjct: 797 LCGHSERLAVAFGLI----NTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTK 852

Query: 679 RFHRFEGGVCSCG 691
            FH F  G CSCG
Sbjct: 853 EFHHFRDGSCSCG 865



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 206/417 (49%), Gaps = 16/417 (3%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F L   R+     LR C       +    HG       +F L L N ++ M  + GE   
Sbjct: 101 FHLCEWRRAAEHGLRACG------HADAAHG-------TFGLRLGNAMLSMLVRFGETWH 147

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VF KM ER+V SW  ++ G+ + G  +  L L+ +M  +  +P+ +T    +++ G 
Sbjct: 148 AWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGG 207

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           +  +  G ++H   ++ G      V N+++ MY+KCG +  A ++FD M     I+WNAM
Sbjct: 208 VPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAM 267

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           IAG+      + GL LF  M E    P+  T TS   A G L  +    +IH   +  GF
Sbjct: 268 IAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGF 327

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V      SL+  Y   G + EA  VF  +E +  +SW+++I GY +     +A+E++
Sbjct: 328 ATDV--AFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             +   ++  D   ++S +   A    ++ G ++H  A          V+N++V+MY K 
Sbjct: 386 ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKS 445

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            +I++A E+F  MP K+V++W+ +I G+  +    EA+  FR ML  DV+P+ V ++
Sbjct: 446 KIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFI 501



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 14/193 (7%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V+F           SLRC         G ++H  +++ G + +  + N L+D+Y KCG
Sbjct: 496 NSVTFIAALAACAATGSLRC---------GKEIHAHVLRQGIASEGYVPNALLDLYVKCG 546

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
           +   A A F     ++VVSW  ++ GF+ +G+    LS F +M  +   P+E T    + 
Sbjct: 547 QTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLC 606

Query: 122 ASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
                  V  G ++ H M  K     N      ++D+ S+ GR+ E     + MP    I
Sbjct: 607 GCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMP----I 662

Query: 181 TWNAMIAGYVLAG 193
           T +A + G +L G
Sbjct: 663 TPDAAVWGALLNG 675


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/693 (34%), Positives = 387/693 (55%), Gaps = 27/693 (3%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R  L  +L  C+K   +     +H  + + G    L+++  L   YA+ G ++ A  VFD
Sbjct: 228 RITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFD 284

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           +  ER+VVSW A++  + Q+G+      LF +M    + P++ TL   + AS   SS+  
Sbjct: 285 RAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLRF 341

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  IH   ++ G + + V+GN+++DMY++CG   EA  +F+ +P  + ++WN MIAG   
Sbjct: 342 GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNA-VSWNTMIAGSSQ 400

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPY 247
            G   + L LF++MQ  G  P   T+ + L+A  S      ++  G ++H  +++ G  Y
Sbjct: 401 KGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG--Y 458

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFD---LIEQKSVISWSSLILGYAQEENLAEAMEL 304
           + +  I  ++V  Y  CG + EA   F    + ++  V+SW+++I   +Q  +   A+  
Sbjct: 459 ASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGF 518

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMY 362
           FR++    +  +     +++   A  A + +G  +H +     SG++++V  + ++  MY
Sbjct: 519 FRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRH--SGMESNVFVATALASMY 576

Query: 363 LKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            +CG ++ A E+F ++ V ++VV +  +I  Y ++GLA EA+ LF +M  +   PD  ++
Sbjct: 577 GRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSF 636

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           ++VLSACSH GL +E  E F  +     + P  +HY+C VD LGRAG L +A+ LI  M 
Sbjct: 637 VSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMD 696

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           VKP++ +W+TLL ACR + D++ GR    ++  LD  +   YV++SNI A AG W+E   
Sbjct: 697 VKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAE 756

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R    S+GL+K AG+SW+E+   +H F  GD +HP +E+I++ L  +   ++ E+G+V 
Sbjct: 757 VRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIR-EIGYVP 815

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
             +  L  + E  KE  L  HSE+LAI L     G+       +RV KNLRVC DCH   
Sbjct: 816 DTRLVLRKVDEAEKERLLCQHSERLAIAL-----GVMSSSTDTVRVMKNLRVCEDCHNAT 870

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +SKI+    VVRD  RFH F  G CSCGDYW
Sbjct: 871 KFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 248/532 (46%), Gaps = 38/532 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR    + LL  G ++H  +V +G   +L   N L+ +Y KC  +     VF ++  R+ 
Sbjct: 36  LRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDE 93

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SWT ++  + ++G AK  + +F +M    V+ +  T    +KA   L  +  G  IH  
Sbjct: 94  ASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAW 153

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SG E   V+ N ++ +Y  CG +  A  +F+ M  + L++WNA IA    +G  D  
Sbjct: 154 IVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMA 212

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF++MQ  G  P   T   TL  C  +        IH  +  SG   ++  V++ +L 
Sbjct: 213 LELFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTL--VVSTALA 267

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y + G L +A+ VFD   ++ V+SW++++  YAQ  +++EA  LF ++    +     
Sbjct: 268 SAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV 327

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L   +      + +  G+ IHA A +     D  + N+++DMY +CG  +EA  LF  +
Sbjct: 328 TL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI 384

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P  N V+W  +I G  + G  K A+ LF++M L+ + P    YL +L A      V  + 
Sbjct: 385 P-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA------VASNP 437

Query: 439 EYFSRLCNDKRMKPRIEHYSC-----------IVDSLGRAGRLDEAKNLIE--SMPVKPS 485
           E    +   +++  RI   SC           +V      G +DEA    +  +M  +  
Sbjct: 438 EEARAMAEGRKLHSRI--VSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLD--GDNPVNYVMMSNIHADAGS 535
           +  W  ++S+   HG    G+       R+D  G  P     ++ + A AG+
Sbjct: 496 VVSWNAIISSLSQHGH---GKRALGFFRRMDLHGVAPNQITCVAVLDACAGA 544



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 15/239 (6%)

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           L  ++    D  L+ QG++IHA    V  GL+  + N ++ +YLKC  + +  E+F+ + 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARI--VSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           V++  +WT IIT Y +HG AK A+ +F +M  + V  D V +LAVL AC+  G + + + 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             + +     ++  +E  S + + L    G  G +  A  L E M  +  +  W   ++A
Sbjct: 150 IHAWI-----VESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAA 202

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
               GDL++  E+ +  ++L+G  P    ++  +   A    +   +  + R  GL++ 
Sbjct: 203 NAQSGDLDMALELFQ-RMQLEGVRPARITLVITLSVCA-KIRQARAIHSIVRESGLEQT 259


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/774 (31%), Positives = 396/774 (51%), Gaps = 118/774 (15%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++  GF  +  + N LI++Y K   +  A  +FDK+ + ++V+ T L+  +  +GN
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86

Query: 94  AK---------------------------------ACLSLFCQMGSSSVKPNEFTLSTNI 120
            K                                 A L+LF QM      P+ FT S+ +
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGR---------INEAARM 170
            A  +++  E   Q +H   +K G    P V N+++  Y  C           +  A ++
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 171 FDVMPAKSL---------------------------------ITWNAMIAGYVLAGYSDK 197
           FD  P   +                                 + WNAMI+GYV  G  ++
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPYSVKTVI 253
               FR+M   G   DE+T+TS + ACGS    +G    G Q+HG+++ +    S   V+
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326

Query: 254 A--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +   +L+ FY K   ++EARRVFD +  + +ISW++++ GY   + + EA  +F ++ ER
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386

Query: 312 SLQVDGFVLSSM---------MGVF----------ADFAL------------VEQGKQIH 340
           ++     ++S +         + +F           D+A             ++ G+QIH
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           +   ++      S  N+++ MY +CG+++ A  +F  MP  + V+W  +I    +HG   
Sbjct: 447 SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           +A+ LF +M+ +D+ PD + +L +L+AC+H+GL++E + YF  +C    + P  +HY+ +
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D L RAG   +A+++I+SMP +    IW+ LL+ CR+HG++ELG +  + LL L     
Sbjct: 567 IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQD 626

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             Y+++SN++A  G W+E  R+R L R +G+KK  G SWVEV+  +H F   D  HP  +
Sbjct: 627 GTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQ 686

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
            ++  L ++   MK +LG+V   K+ LHD++ E KE SL  HSEKLA+    V G +   
Sbjct: 687 AVYTYLQQLVNEMK-KLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAV----VYGIMKLP 741

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            G  IRVFKNLR+CGDCH   K +SK+++   VVRD  RFH F+ G CSCG+YW
Sbjct: 742 LGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 160/357 (44%), Gaps = 57/357 (15%)

Query: 21  CCSKNLLLDYGVQLHG----ALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           C  K  + + G Q+HG     +V+    F L +NN LI  Y K   M  A  VFDKM  R
Sbjct: 296 CNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR 355

Query: 77  NVVSWTALMCGFL-------------------------------QNGNAKACLSLFCQMG 105
           +++SW A++ G++                               QNG  +  L LF QM 
Sbjct: 356 DIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           S  ++P ++  +  I A  VL S++NG QIH   ++ G +     GN++I MYS+CG + 
Sbjct: 416 SEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVE 475

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +F  MP    ++WNAMIA     G+  K + LF +M +   +PD  TF + L AC 
Sbjct: 476 SAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACN 535

Query: 226 SLGSVGGG-----TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-Q 279
             G +  G     T    + IT G  +  +      L+D   + G  ++A+ V   +  +
Sbjct: 536 HAGLIKEGRHYFDTMCTRYGITPGEDHYAR------LIDLLCRAGMFLKAQSVIKSMPFE 589

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV----DG--FVLSSMMGVFADF 330
                W +L+ G     N    MEL  Q  +R L++    DG   +LS+M      +
Sbjct: 590 AGAPIWEALLAGCRIHGN----MELGIQAADRLLELIPGQDGTYIILSNMYAALGQW 642



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 2/187 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A ++  CS    LD G Q+H  ++++G    L   N LI MY++CG +  A +VF  M 
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSW A++    Q+G+    + LF QM    + P+  T  T + A      ++ G  
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLA 192
               MC + G          +ID+  + G   +A  +   MP ++    W A++AG  + 
Sbjct: 546 YFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIH 605

Query: 193 GYSDKGL 199
           G  + G+
Sbjct: 606 GNMELGI 612



 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
            + +HA+        +T + N ++++Y K   I  A +LF+++P  ++V  T +++ Y  
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
            G  K A  LF    L     D V+Y A+++A SH
Sbjct: 84  SGNVKLAQQLFNATPL--TIRDTVSYNAMITAYSH 116


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/677 (34%), Positives = 372/677 (54%), Gaps = 52/677 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  YAK   ++ A   F+ M ER+VVSW  ++    Q+G  +  L L  +M    V+
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T ++++ A   L S+  G Q+H   ++S  + +P V +++I++Y+KCG   EA R+
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ +  ++ ++W  +I G +      K + LF +M+      D+F   + +  C +   +
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H   + SG   ++  V++ SL+  Y KCG L  A  VF  + ++ ++SW+S+I 
Sbjct: 388 CLGRQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 291 GYAQEENLAEAMELFRQLRERSL---------------QVDGFVLSSMM----------- 324
            Y+Q  N+ +A E F  +  R+                + DG  + S M           
Sbjct: 446 AYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 325 ---GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +F   AD    + G QI  +  K    L+ SV+N+ + MY KCG I EA +LF+ +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W  +ITGY +HG+ K+A   F  ML    +PD ++Y+AVLS CSHSGLV+E +
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+KP+  +W  LLSAC++
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKI 685

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+ EL     + +  LD  +  +Y++++ I++DAG  ++  ++RKL R KG+KK  G S
Sbjct: 686 HGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV+ ++H F   D +HP    I   L E+ +++   LG+V          + ES    
Sbjct: 746 WMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIA-HLGYV----------RTESPRSE 794

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +  HSEKLA+       G+   P  + I + KNLR+CGDCH  IK +S +    FV+RD 
Sbjct: 795 IH-HSEKLAVAF-----GIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSCGDYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 258/591 (43%), Gaps = 114/591 (19%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---------- 62
           Q LAD+LR C     L     LHG LV +G +  + L N L+  Y  CG           
Sbjct: 5   QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRA 64

Query: 63  -------------MNG---------ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                        MNG         A  +FD+M  R+V SW  LM G+ Q       L  
Sbjct: 65  DIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLET 124

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FT    +K+ G L   E   Q+ G+  K  F  +P V  +++DM+ 
Sbjct: 125 FVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFV 184

Query: 160 KCGRINEAARM-------------------------------FDVMPAKSLITWNAMIAG 188
           +CG ++ A+R+                               F+ M  + +++WN MIA 
Sbjct: 185 RCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G   + L L  +M   G   D  T+TS+L AC  L S+G G Q+H  +I S  P  
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS-LP-Q 302

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A +L++ Y KCG   EA+RVF+ ++ ++ +SW+ LI G  Q E  ++++ELF Q+
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362

Query: 309 RERSLQVDGFVLSSMM-GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           R   + +D F L++++ G F    L   G+Q+H+   K        VSNS++ +Y KCG 
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLC-LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYG-------------------------------KH 396
           +  A  +F+ M  +++V+WT +IT Y                                +H
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQH 481

Query: 397 GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR------LCNDKR 449
           G  ++ + ++  ML   DV PD V Y+ +   C+  G  +   +          + N   
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
               I  YS       + GR+ EA+ L + +  K  ++ W  +++    HG
Sbjct: 542 ANAAITMYS-------KCGRISEAQKLFDLLNGKDVVS-WNAMITGYSQHG 584



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 231/471 (49%), Gaps = 44/471 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L +G QLH  +++     D  + + LI++YAKCG    A  VF+ + +RN
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 335

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQI 135
            VSWT L+ G LQ       + LF QM +  +  ++F L+T I  SG  + ++   G Q+
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI--SGCFNRMDLCLGRQL 393

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRI 164
           H +C+KSG     VV NS+I +Y+KC                               G I
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKA 223
            +A   FD M  ++ ITWNAM+  Y+  G  + GL ++  M    ++ PD  T+ +  + 
Sbjct: 454 IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 513

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  +G+   G QI G  + +G   +V   +A + +  Y KCG + EA+++FDL+  K V+
Sbjct: 514 CADIGANKLGDQIIGHTVKAGLILNVS--VANAAITMYSKCGRISEAQKLFDLLNGKDVV 571

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+++I GY+Q     +A + F  +  +  + D     +++   +   LV++GK      
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631

Query: 344 AKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLAK 400
            +V  G+   + +   +VD+  + G + EA +L ++MP+K     W  +++    HG   
Sbjct: 632 TRV-HGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG-ND 689

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           E   L  K + +   PD  +Y+ +    S +G  ++S +   +L  DK +K
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ-VRKLMRDKGIK 739



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 202/455 (44%), Gaps = 67/455 (14%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           E N +  N +++ Y+K G +++A  +FD MP + + +WN +++GY  A     GL  F  
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 205 MQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           M   G+ +P+ FTF   +K+CG+LG      Q+ G      F +     +  +LVD +V+
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWK--FDFWGDPDVETALVDMFVR 185

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS----------- 312
           CG +  A R+F  IE+ ++   +S++ GYA+   +  A+E F  + ER            
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 313 --------------------LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
                               +++D    +S +   A    +  GKQ+HA   +    +D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V+++++++Y KCG   EA  +FN +  +N V+WTV+I G  ++    ++V LF +M  +
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 413 DVEPDGVAYLAVLSAC-------------------SHSGLVEESQEYFSRL--CND---- 447
            +  D  A   ++S C                    H+  +  S    S    C D    
Sbjct: 366 LMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA 425

Query: 448 ----KRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
                 M  R I  ++ ++ +  + G + +A+   + M  + +I  W  +L A   HG  
Sbjct: 426 EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAIT-WNAMLGAYIQHGAE 484

Query: 503 ELGREVGEILLRLDGDNP--VNYVMMSNIHADAGS 535
           E G ++   +L      P  V YV +    AD G+
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 519



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 48/315 (15%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +  C   + L  G QLH   +K G +  ++++N LI +YAKCG++  A  VF  M 
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433

Query: 75  ERNVVSWTALMCGFLQNGNA------------------KACLSLFCQMGS---------- 106
           ER++VSWT+++  + Q GN                    A L  + Q G+          
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 107 ----SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
                 V P+  T  T  +    + + + G QI G  +K+G   N  V N+ I MYSKCG
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           RI+EA ++FD++  K +++WNAMI GY   G   +    F  M   G  PD  ++ + L 
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613

Query: 223 ACGSLGSVGGG-------TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
            C   G V  G       T++HG  I+ G  +         +VD   + G L EA+ + D
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHG--ISPGLEH------FSCMVDLLGRAGHLTEAKDLID 665

Query: 276 LIEQKSVIS-WSSLI 289
            +  K     W +L+
Sbjct: 666 KMPMKPTAEVWGALL 680


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/670 (34%), Positives = 366/670 (54%), Gaps = 20/670 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  + + G      LNN L+ M AK G +  A ++FD +  +N+ SW  ++  +   G+
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS-GFEWNPVVGN 152
               L LF +M    V P   T +T + A   L  ++ G +IH     S G   + ++  
Sbjct: 123 PSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD-KGLLLFRKMQEHGEI 211
           +I  MY+KCG ++ A  +FD +PAK++++WNA+IA Y  +G+S  + L LF KM EHG  
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVR 239

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV-IAGSLVDFYVKCGCLVEA 270
           P   TF   L AC  + S+    +IH  ++ +G  + V+ V +  +L++ Y KCG L  A
Sbjct: 240 PCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVA 296

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +F  ++++  +S + +I  +AQ+    E++++FR++    L  D    +S++   +  
Sbjct: 297 RDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCC 356

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN-----SIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +E GK+IH    +   G    + N     ++V MY KCG +++A  +F  M  KN V+
Sbjct: 357 GALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVS 416

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  ++      G   EA    R    + VE D  ++++VL ACSHSG++E + ++F  + 
Sbjct: 417 WNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLML 476

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D  + P  E+Y C+VD L R+GRL +A  L+ SMP  P    W+TLL  CRV G LE  
Sbjct: 477 SDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENA 536

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK-VAGRSWVEVDK 564
               E    L+  N   Y ++S++++  G  +E   LR   + +GL+K V GRS +EV  
Sbjct: 537 ASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHG 596

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
            +H F  GD +HP  +KI + L  +   +K+  GFV      +HD++ E KEE L +HSE
Sbjct: 597 RVHEFVAGDSSHPQIDKILRELDILNVELKQA-GFVPSTDGVVHDLKTEDKEEILALHSE 655

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLA+   L+    + + G  + V KNLRVC DCH  IK +SK+   V  VRDA RFHRF+
Sbjct: 656 KLAVAFGLI----STKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQ 711

Query: 685 GGVCSCGDYW 694
            G CSCGDYW
Sbjct: 712 SGTCSCGDYW 721


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/603 (34%), Positives = 357/603 (59%), Gaps = 3/603 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A   R C+    L  G QLH   +K  F  D+ +    +DMYAKCG +  A  +F+ + +
Sbjct: 281 ASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPK 340

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            ++  + A++ G ++N      L  F  +  S +  NE +LS    A   +    +G Q+
Sbjct: 341 HSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H + +KS    N  V NSI+DMY KC  ++EA  MFD M  +  ++WNA+IA +   G  
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++ L LF  M      PD+FT+ S LKAC S  ++  G +IH  +I SG    + + + G
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGL--GLDSFVGG 518

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KCG + EA+++ D IEQ++++SW+++I G+   ++  +A   F ++ + S++ 
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKP 578

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F  + ++   A+ A V  GKQIH    K+    D  +++++VDMY KCG + ++  +F
Sbjct: 579 DNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVF 638

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + P K+ VTW  +I GY +HGL +EA+G F +M L++V P+   ++++L AC+H G ++
Sbjct: 639 EKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFID 698

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF+ +  +  ++P+IEHYSC++D +GR+GR+ EA  LI+ MP +    IW+TLLS 
Sbjct: 699 KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSI 758

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++HG++E+  +    +L+L+ ++    +++SNI+ADAG W +   +RK+ R   LKK  
Sbjct: 759 CKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEP 818

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EV  E+H F  G+ THP  E+I+++L  +   MK  +G++  + + + +  EE +
Sbjct: 819 GCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMK-WIGYIPDIDFLIDEESEEYE 877

Query: 616 EES 618
           +++
Sbjct: 878 QKA 880



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 278/563 (49%), Gaps = 73/563 (12%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV--- 78
           CS    L  G Q H  ++  GF  D+ ++N L+ MY +C  +N A  VF+KM +R+V   
Sbjct: 53  CSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISY 112

Query: 79  ----------------------------VSWTALMCGFLQNGNAKACLSLFCQMG-SSSV 109
                                       VSW +++ GFLQNG  +  + +F  MG S  V
Sbjct: 113 NTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEV 172

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
             ++ T +  +KA  VL     G+Q+HG+ ++ GF  + V G++++DMY+KC R++++ +
Sbjct: 173 GFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLK 232

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F  +P K+ + W+A+IAG V       GL LF++MQ+ G    +  + S  ++C  L +
Sbjct: 233 IFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSA 292

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  GTQ+H   +   F   +   +  + +D Y KCG L +A+R+F+ + + S+  ++++I
Sbjct: 293 LKVGTQLHAHALKCDFGSDI--TVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAII 350

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE---QGKQIHAYAAKV 346
           +G  + E   EA++ F+ L +  L   GF   S+ G F+  A ++    G+Q+H+ + K 
Sbjct: 351 VGCVRNEKGFEALQFFQLLLKSGL---GFNEISLSGAFSACASIKGDLDGRQLHSLSVKS 407

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +  V+NSI+DMY KC  + EA  +F+EM  ++ V+W  +I  + ++G  +E + LF
Sbjct: 408 TLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLF 467

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND------------------- 447
             ML   +EPD   Y +VL ACS    +    E  +R+                      
Sbjct: 468 ASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKC 527

Query: 448 ------KRMKPRIEH-----YSCIVDSLGRAGRLDEAKNLIE---SMPVKPSIAIWQTLL 493
                 K++  RIE      ++ I+         ++A +       M VKP    +  +L
Sbjct: 528 GMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVL 587

Query: 494 SACRVHGDLELGREVGEILLRLD 516
            AC     + LG+++   +++L+
Sbjct: 588 DACANLASVGLGKQIHGQIIKLE 610



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 262/511 (51%), Gaps = 11/511 (2%)

Query: 11  ERQRLADSLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           ++   A  L+ CS  +L D   G+Q+HG +V+MGF  D++  + L+DMYAKC  ++ +  
Sbjct: 175 DQTTFAVVLKACS--VLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLK 232

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F ++  +N V W+A++ G +QN      L LF +M    +  ++   ++  ++   LS+
Sbjct: 233 IFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSA 292

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           ++ G Q+H   +K  F  +  VG + +DMY+KCG + +A R+F+ +P  SL  +NA+I G
Sbjct: 293 LKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVG 352

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
            V      + L  F+ + + G   +E + +    AC S+     G Q+H   + S    +
Sbjct: 353 CVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN 412

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A S++D Y KC  L EA  +FD +E++  +SW+++I  + Q  N  E + LF  +
Sbjct: 413 I--CVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASM 470

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++ D F   S++   +    +  G +IH    K   GLD+ V  +++DMY KCG+I
Sbjct: 471 LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMI 530

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +EA ++ + +  + +V+W  II G+     +++A   F +ML   V+PD   Y  VL AC
Sbjct: 531 EEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDAC 590

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           ++   V   ++   ++     +   +   S +VD   + G + ++  + E  P K  +  
Sbjct: 591 ANLASVGLGKQIHGQIIK-LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVT- 648

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           W  ++     HG   LG E      R+  +N
Sbjct: 649 WNAMICGYAQHG---LGEEALGYFERMQLEN 676



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 219/456 (48%), Gaps = 49/456 (10%)

Query: 101 FCQMGSSSVKPNEFTLSTNIKASGVL-------SSVENGMQIHGMCMKSGFEWNPVVGNS 153
           FC +  S+++ N+  L T I+    +       +S++ G Q H   + SGF  +  + N 
Sbjct: 26  FCTI--STLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNC 83

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD----------------- 196
           ++ MY +C  +N A ++F+ M  + +I++N MI+GY  AG  +                 
Sbjct: 84  LMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSW 143

Query: 197 --------------KGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
                         K + +F  M    E+  D+ TF   LKAC  L   G G Q+HG ++
Sbjct: 144 NSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIV 203

Query: 242 TSGFPYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
             GF    K V+ GS L+D Y KC  L ++ ++F  I  K+ + WS++I G  Q +    
Sbjct: 204 RMGF---YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
            +ELF+++++  + V   + +S+    A  + ++ G Q+HA+A K   G D +V  + +D
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLD 320

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG + +A  +FN +P  ++  +  II G  ++    EA+  F+ +L   +  + ++
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380

Query: 421 YLAVLSAC-SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
                SAC S  G ++  Q     L     ++  I   + I+D  G+   L EA  + + 
Sbjct: 381 LSGAFSACASIKGDLDGRQ--LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDE 438

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           M  + +++ W  +++A   +G+ E    +   +LRL
Sbjct: 439 MERRDAVS-WNAVIAAHEQNGNEEETLNLFASMLRL 473


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/782 (31%), Positives = 396/782 (50%), Gaps = 113/782 (14%)

Query: 21  CCSKNLL-LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           CC +NL        +HG ++  GF     + N LID+Y K  +   A  +FD++ + +V+
Sbjct: 21  CCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVI 80

Query: 80  SWTALMCGFLQNGNAK---------------------------------ACLSLFCQMGS 106
           + T L+  +   GN K                                 + + LF  M  
Sbjct: 81  ARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRW 140

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGM-QIHGMCMKSGFEWNPVVGNSIIDMYSKCGR-- 163
           ++ +P++FT ++ + AS ++   E    Q+HG  +K G E  P V N+++ +Y KC    
Sbjct: 141 ANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSP 200

Query: 164 -------INEAARMFDVMPAK------SLIT-------------------------WNAM 185
                  +  A ++FD MP +      +LIT                         WNAM
Sbjct: 201 LVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAM 260

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF------ 239
           I+GY+  G  +  L LFRKM+  G   DE T+TS + AC   G    G Q+H +      
Sbjct: 261 ISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNEL 320

Query: 240 -------------LITSGFPY-------------SVKTVIA-GSLVDFYVKCGCLVEARR 272
                        LIT  + Y              VK +I   +L+  YV  G + EA+ 
Sbjct: 321 NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKS 380

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            F  + +K++++W+ +I G AQ     +A++LF Q++    + + +  +  +   +    
Sbjct: 381 FFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGA 440

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E G+Q+HA    +      SV N+++ MY +CG+++ A  +F  MP  + V+W  +I  
Sbjct: 441 LENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAA 500

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
            G+HG   +A+ L+ +ML + + PD   +L VLSACSH+GLVEE   YF+ +  +  + P
Sbjct: 501 LGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAP 560

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
             +HY+ ++D   RAG+  +AKN+I+SMP +    IW+ LL+ CR HG+++LG E  E L
Sbjct: 561 GEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKL 620

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
            +L   +   YV++SN++A  G WN+  R RKL R +G+KK    SW EV+ ++H F   
Sbjct: 621 FKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVD 680

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP    I+  L ++   MK ++G++   KY LHD++ E KE +L  HSEKLA+   L
Sbjct: 681 DTVHPEVLSIYNYLEKLNLEMK-KIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGL 739

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           ++       G  +RVFKNLR+CGDCH  IK +SK++    VVRD  RFH F+ G CSC +
Sbjct: 740 MK----LPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRN 795

Query: 693 YW 694
           YW
Sbjct: 796 YW 797



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 216/522 (41%), Gaps = 127/522 (24%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V  N +    N+     LSS      +HG  + SGF+    + N +ID+Y K      A 
Sbjct: 9   VLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYAR 68

Query: 169 RMFDVMPAKSLIT---------------------------------WNAMIAGYVLAGYS 195
           ++FD +P   +I                                  +NAMI GY      
Sbjct: 69  KLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDG 128

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKA----------CGSLGSVGGGTQIHGFLITSG- 244
              + LFR M+     PD+FTF S L A          CG         Q+HG ++  G 
Sbjct: 129 HSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCG---------QMHGTVVKFGI 179

Query: 245 --FPYSVKTVIA-----------------------------------GSLVDFYVKCGCL 267
             FP  +  +++                                    +L+  YV+ G L
Sbjct: 180 EIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDL 239

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR + D + ++  I+W+++I GY       +A+ LFR++R   +QVD    +S++   
Sbjct: 240 TGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISAC 299

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDT----SVSNSIVDMYLKCGLIDEATELFNEMPV--- 380
           AD      GKQ+HAY  K     D     SV N+++ +Y K G +D A ++F EMPV   
Sbjct: 300 ADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDI 359

Query: 381 ----------------------------KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
                                       KN++TWTV+I+G  ++G  ++A+ LF +M LD
Sbjct: 360 ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLD 419

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
             EP+  A+   ++ACS  G +E  ++  +++ +       +   + ++    R G ++ 
Sbjct: 420 GYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGH-DSTLSVGNAMITMYARCGIVEA 478

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           A+ +  +MP    ++ W ++++A   HG      E+ E +L+
Sbjct: 479 ARTMFLTMPFVDPVS-WNSMIAALGQHGHGVKAIELYEQMLK 519



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 8/201 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A ++  CS    L+ G QLH  +V +G    L + N +I MYA+CG +  A  +F  M 
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSW +++    Q+G+    + L+ QM    + P+  T  T + A      VE G +
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVL 191
             + M    G          +ID++ + G+ ++A  + D MP  A++ I W A++AG   
Sbjct: 548 YFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI-WEALLAGCRT 606

Query: 192 AGYSDKGL----LLFRKMQEH 208
            G  D G+     LF+ + +H
Sbjct: 607 HGNMDLGIEAAEKLFKLIPQH 627


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/637 (34%), Positives = 365/637 (57%), Gaps = 9/637 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  C   + +  GV +HG + K+G + D+++ N L+ MY K   +  A  VF KM 
Sbjct: 225 MSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ V+W  ++CG+ Q G  +A + LF  M    V P+  ++++ I+A G    ++ G  
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKF 343

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   + SGFE + V  N +IDMY+KCG +  A  +FD    K  +TWN++I GY  +GY
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             +GL  F+ M+   + PD  TF   L     L  +  G  IH  +I  GF    + +I 
Sbjct: 404 YKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF--EAELIIG 460

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SL+D Y KCG + +  +VF  +    +ISW+++I      ++     ++  ++R   L 
Sbjct: 461 NSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLM 520

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   +  ++ + +  A+  QGK+IH Y  K     +  + N++++MY KCG ++   ++
Sbjct: 521 PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKV 580

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  M  K+VVTWT +I+ +G +G  K+A+  F+ M L  V PD VA++A + ACSHSG+V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E   +F R+  D  ++PR+EHY+C+VD L R+G L +A+  I SMP+KP  ++W  LLS
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR  G+  + + V + +L L+ D+   YV++SNI+A  G W++ + +R   ++KGLKK 
Sbjct: 701 ACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKE 760

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW+E+ K ++ F  GD +    +K+  +L  + + M +E G+V  +++ALHD++E+ 
Sbjct: 761 PGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKE-GYVADLQFALHDVEEDD 819

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           K + L  HSE+LAI   L    LN +PG  + +F  L
Sbjct: 820 KRDMLCGHSERLAIAFGL----LNTKPGSPLLIFPTL 852



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 255/484 (52%), Gaps = 8/484 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C++ L L+ G  +H   ++MGF  DL + N LIDMY++  +++ A  VF++M  R+ 
Sbjct: 128 INSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDS 187

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+  NG  +  L ++ +   + + P+ FT+S+ + A G L +V+ G+ +HG+
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV 247

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K G   + ++GN ++ MY K  R+ EA R+F  M  K  +TWN MI GY   G  +  
Sbjct: 248 IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEAS 307

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF  M + G +PD  + TST++ACG  G +  G  +H +LI SGF     TV    L+
Sbjct: 308 VKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF--ECDTVACNILI 364

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDG 317
           D Y KCG L+ A+ VFD  + K  ++W+SLI GY Q     E +E F+ ++ ER      
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVT 424

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           FVL  ++ +F+  A + QG+ IH    K     +  + NS++D+Y KCG +D+  ++F+ 
Sbjct: 425 FVL--LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSY 482

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M   ++++W  +I              +  +M  + + PD    L +L  CS   +  + 
Sbjct: 483 MSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG 542

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +E    +      +  +   + +++   + G L+    + + M  K  +  W  L+SA  
Sbjct: 543 KEIHGYIFKSG-FESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFG 600

Query: 498 VHGD 501
           ++G+
Sbjct: 601 MYGE 604



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 235/476 (49%), Gaps = 22/476 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERNVVSWTALMCGFLQNG 92
           +H  ++  G S  ++ +  LI  YA+  +   + +VF  +    NV  W +++     NG
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L  + +M    ++P+ FT  + I +   +  +E G  +H   M+ GFE +  +GN
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++IDMYS+   ++ A  +F+ M  +  ++WN++I+GY   G+ +  L ++ K +  G +P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT +S L ACGSL +V  G  +HG +   G    V  +I   L+  Y K   L EARR
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV--IIGNGLLSMYFKFERLREARR 278

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV-----LSSMMGVF 327
           VF  +  K  ++W+++I GYAQ      +++LF  +      +DGFV     ++S +   
Sbjct: 279 VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM------IDGFVPDMLSITSTIRAC 332

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                ++ GK +H Y        DT   N ++DMY KCG +  A E+F+    K+ VTW 
Sbjct: 333 GQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWN 392

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I GY + G  KE +  F+ M ++  +PD V ++ +LS  S    + + +      C+ 
Sbjct: 393 SLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIH---CDV 448

Query: 448 KRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            +     E    + ++D   + G +D+   +   M     I+ W T++ A  VH D
Sbjct: 449 IKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVI-ASSVHFD 502



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 9/422 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            V +   +  ++R C ++  L  G  +H  L+  GF  D +  N LIDMYAKCG++  A 
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD    ++ V+W +L+ G+ Q+G  K  L  F +M     KP+  T    +     L+
Sbjct: 378 EVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLA 436

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            +  G  IH   +K GFE   ++GNS++D+Y+KCG +++  ++F  M A  +I+WN +IA
Sbjct: 437 DINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA 496

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
             V       G  +  +M+  G +PDE T    L  C  L     G +IHG++  SGF  
Sbjct: 497 SSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFES 556

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           +V   I  +L++ Y KCG L    +VF  +++K V++W++LI  +       +A++ F+ 
Sbjct: 557 NVP--IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKC 365
           +    +  D     + +   +   +V++G +      K    L+  + +   +VD+  + 
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD-RMKTDYNLEPRMEHYACVVDLLARS 673

Query: 366 GLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           GL+ +A E    MP+K +   W  +++     G    A  + +K+L  ++  D   Y  +
Sbjct: 674 GLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL--ELNSDDTGYYVL 731

Query: 425 LS 426
           +S
Sbjct: 732 VS 733



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 209/445 (46%), Gaps = 17/445 (3%)

Query: 101 FCQMGSSSVKPN-EFTLSTNIKASGVLSSVENGMQ---IHGMCMKSGFEWNPVVGNSIID 156
           FC   +++ +P+ EF  S+ +K    LSS +N  Q   +H + + SG   + +    +I 
Sbjct: 6   FCSNFNNTPEPSQEFLRSSLLKT---LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLIS 62

Query: 157 MYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
            Y++      +  +F  + P  ++  WN++I      G   + L  + +M+E    PD F
Sbjct: 63  KYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAF 122

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           TF S + +C  +  +  G  +H   +  GF   +   I  +L+D Y +   L  AR VF+
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDL--YIGNALIDMYSRFVDLDNARYVFE 180

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  +  +SW+SLI GY       +A++++ + R   +  D F +SS++        V++
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G  +H    K+    D  + N ++ MY K   + EA  +F++M VK+ VTW  +I GY +
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
            G  + +V LF  M +D   PD ++  + + AC  SG ++  +     L          +
Sbjct: 301 LGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGF---ECD 356

Query: 456 HYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
             +C  ++D   + G L  A+ + ++   K S+  W +L++     G  + G E  +++ 
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT-WNSLINGYTQSGYYKEGLESFKMMK 415

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNE 538
                + V +V++ +I +     N+
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQ 440


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/662 (34%), Positives = 365/662 (55%), Gaps = 7/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H +L+      D  L N L+       +   +  +F      N+  + +L+ GF+ N 
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L LF  +    +  + FT    +KA    SS + G+ +H + +K GF  +     
Sbjct: 91  LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++ +YS  GR+N+A ++FD +P +S++TW A+ +GY  +G   + + LF+KM E G  P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +     L AC  +G +  G  I  ++          + +  +LV+ Y KCG + +AR 
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYM--EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD + +K +++WS++I GYA      E +ELF Q+ + +L+ D F +   +   A    
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G+   +   +     +  ++N+++DMY KCG +    E+F EM  K++V     I+G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             K+G  K +  +F +     + PDG  +L +L  C H+GL+++   +F+ +     +K 
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +EHY C+VD  GRAG LD+A  LI  MP++P+  +W  LLS CR+  D +L   V + L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           + L+  N  NYV +SNI++  G W+E   +R +   KG+KK+ G SW+E++ ++H F   
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HPL++KI+  L ++   M+  +GFV   ++   D++EE KE  L  HSEKLA+ L L
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMR-LMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGL 627

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    +   G+VIRV KNLRVCGDCHE +K +SKI +   VVRD  RFH F  G CSC D
Sbjct: 628 I----STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683

Query: 693 YW 694
           YW
Sbjct: 684 YW 685



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 195/377 (51%), Gaps = 6/377 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++      G+ LH  +VK GF+ D+     L+ +Y+  G +N A  +FD++ +R+V
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WTAL  G+  +G  +  + LF +M    VKP+ + +   + A   +  +++G  I   
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +   + N  V  +++++Y+KCG++ +A  +FD M  K ++TW+ MI GY    +  +G
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF +M +    PD+F+    L +C SLG++  G    G  +     +     +A +L+
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALI 355

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +     VF  +++K ++  ++ I G A+  ++  +  +F Q  +  +  DG 
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++       L++ G +    A      L  +V +   +VD++ + G++D+A  L  
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFN-AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474

Query: 377 EMPVK-NVVTWTVIITG 392
           +MP++ N + W  +++G
Sbjct: 475 DMPMRPNAIVWGALLSG 491


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/677 (34%), Positives = 372/677 (54%), Gaps = 52/677 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N ++  YAK   ++ A   F+ M ER+VVSW  ++    Q+G  +  L L  +M    V+
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T ++++ A   L S+  G Q+H   ++S  + +P V +++I++Y+KCG   EA R+
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ +  ++ ++W  +I G +      K + LF +M+      D+F   + +  C +   +
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H   + SG   ++  V++ SL+  Y KCG L  A  VF  + ++ ++SW+S+I 
Sbjct: 388 CLGRQLHSLCLKSGHNRAI--VVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 291 GYAQEENLAEAMELFRQLRERSL---------------QVDGFVLSSMM----------- 324
            Y+Q  N+ +A E F  +  R+                + DG  + S M           
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 325 ---GVF---ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               +F   AD    + G QI  +  K    L+ SV+N+ + MY KCG I EA +LF+ +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W  +ITGY +HG+ K+A   F  ML    +PD ++Y+AVLS CSHSGLV+E +
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  +     + P +EH+SC+VD LGRAG L EAK+LI+ MP+KP+  +W  LLSAC++
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKI 685

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           HG+ EL     + +  LD  +  +Y++++ I++DAG  ++  ++RKL R KG+KK  G S
Sbjct: 686 HGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV+ ++H F   D +HP    I   + E+ +++   LG+V          + ES    
Sbjct: 746 WMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIA-HLGYV----------RTESPRSE 794

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +  HSEKLA+       G+   P  + I + KNLR+CGDCH  IK +S +    FV+RD 
Sbjct: 795 IH-HSEKLAVAF-----GIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSCGDYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 258/591 (43%), Gaps = 114/591 (19%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---------- 62
           Q LAD+LR C     L     LHG LV +G +  + L N L+  Y  CG           
Sbjct: 5   QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA 64

Query: 63  -------------MNG---------ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
                        MNG         A  +FD+M  R+V SW  LM G+ Q       L  
Sbjct: 65  DIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLET 124

Query: 101 FCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           F  M  S    PN FT    +K+ G L   E   Q+ G+  K  F  +P V  +++DM+ 
Sbjct: 125 FVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFV 184

Query: 160 KCGRINEAARM-------------------------------FDVMPAKSLITWNAMIAG 188
           +CG ++ A+R+                               F+ M  + +++WN MIA 
Sbjct: 185 RCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 244

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              +G   + L L  +M   G   D  T+TS+L AC  L S+G G Q+H  +I S  P  
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS-LP-Q 302

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +A +L++ Y KCG   EA+RVF+ ++ ++ +SW+ LI G  Q E  ++++ELF Q+
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362

Query: 309 RERSLQVDGFVLSSMM-GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           R   + +D F L++++ G F    L   G+Q+H+   K        VSNS++ +Y KCG 
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLC-LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYG-------------------------------KH 396
           +  A  +F+ M  +++V+WT +IT Y                                +H
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQH 481

Query: 397 GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR------LCNDKR 449
           G  ++ + ++  ML   DV PD V Y+ +   C+  G  +   +          + N   
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
               I  YS       + GR+ EA+ L + +  K  ++ W  +++    HG
Sbjct: 542 ANAAITMYS-------KCGRISEAQKLFDLLNGKDVVS-WNAMITGYSQHG 584



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 231/471 (49%), Gaps = 44/471 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL  C++   L +G QLH  +++     D  + + LI++YAKCG    A  VF+ + +RN
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 335

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQI 135
            VSWT L+ G LQ       + LF QM +  +  ++F L+T I  SG  + ++   G Q+
Sbjct: 336 SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI--SGCFNRMDLCLGRQL 393

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRI 164
           H +C+KSG     VV NS+I +Y+KC                               G I
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKA 223
            +A   FD M  ++ ITWNAM+  Y+  G  + GL ++  M    ++ PD  T+ +  + 
Sbjct: 454 IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 513

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  +G+   G QI G  + +G   +V   +A + +  Y KCG + EA+++FDL+  K V+
Sbjct: 514 CADIGANKLGDQIIGHTVKAGLILNVS--VANAAITMYSKCGRISEAQKLFDLLNGKDVV 571

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+++I GY+Q     +A + F  +  +  + D     +++   +   LV++GK      
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631

Query: 344 AKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGKHGLAK 400
            +V  G+   + +   +VD+  + G + EA +L ++MP+K     W  +++    HG   
Sbjct: 632 TRV-HGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG-ND 689

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           E   L  K + +   PD  +Y+ +    S +G  ++S +   +L  DK +K
Sbjct: 690 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ-VRKLMRDKGIK 739



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 202/455 (44%), Gaps = 67/455 (14%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           E N +  N +++ Y+K G +++A  +FD MP + + +WN +++GY  A     GL  F  
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 205 MQEHGE-IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           M   G+ +P+ FTF   +K+CG+LG      Q+ G      F +     +  +LVD +V+
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWK--FDFWGDPDVETALVDMFVR 185

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS----------- 312
           CG +  A R+F  IE+ ++   +S++ GYA+   +  A+E F  + ER            
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 313 --------------------LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
                               +++D    +S +   A    +  GKQ+HA   +    +D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V+++++++Y KCG   EA  +FN +  +N V+WTV+I G  ++    ++V LF +M  +
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 413 DVEPDGVAYLAVLSAC-------------------SHSGLVEESQEYFSRL--CND---- 447
            +  D  A   ++S C                    H+  +  S    S    C D    
Sbjct: 366 LMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA 425

Query: 448 ----KRMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
                 M  R I  ++ ++ +  + G + +A+   + M  + +I  W  +L A   HG  
Sbjct: 426 EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT-WNAMLGAYIQHGAE 484

Query: 503 ELGREVGEILLRLDGDNP--VNYVMMSNIHADAGS 535
           E G ++   +L      P  V YV +    AD G+
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 519



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 48/315 (15%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +  C   + L  G QLH   +K G +  ++++N LI +YAKCG++  A  VF  M 
Sbjct: 374 LATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS 433

Query: 75  ERNVVSWTALMCGFLQNGNA------------------KACLSLFCQMGS---------- 106
           ER++VSWT+++  + Q GN                    A L  + Q G+          
Sbjct: 434 ERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSA 493

Query: 107 ----SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
                 V P+  T  T  +    + + + G QI G  +K+G   N  V N+ I MYSKCG
Sbjct: 494 MLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCG 553

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           RI+EA ++FD++  K +++WNAMI GY   G   +    F  M   G  PD  ++ + L 
Sbjct: 554 RISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLS 613

Query: 223 ACGSLGSVGGG-------TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
            C   G V  G       T++HG  I+ G  +         +VD   + G L EA+ + D
Sbjct: 614 GCSHSGLVQEGKLYFDMMTRVHG--ISPGLEH------FSCMVDLLGRAGHLTEAKDLID 665

Query: 276 LIEQKSVIS-WSSLI 289
            +  K     W +L+
Sbjct: 666 KMPMKPTAEVWGALL 680


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/568 (37%), Positives = 336/568 (59%), Gaps = 8/568 (1%)

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           +T +K   V   +  G  +H   ++S F  + V+GN++++MY+KCG + EA ++F+ MP 
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +  +TW  +I+GY         LL F +M   G  P+EFT +S +KA  +      G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HGF +  GF  +V   +  +L+D Y + G + +A+ VFD +E ++ +SW++LI G+A+  
Sbjct: 184 HGFCVKCGFDSNVH--VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A+ELF+ +     +   F  +S+ G  +    +EQGK +HAY  K    L     N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           +++DMY K G I +A ++F+ +  ++VV+W  ++T Y +HG  KEAV  F +M    + P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + +++L+VL+ACSHSGL++E   Y+  +  D  + P   HY  +VD LGRAG L+ A   
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDLNRALRF 420

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           IE MP++P+ AIW+ LL+ACR+H + ELG    E +  LD D+P  +V++ NI+A  G W
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           N+  R+RK  +  G+KK    SWVE++  IH F   D+ HP  E+I +   E+  ++K E
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK-E 539

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
           LG+V    + +  + ++ +E +L+ HSEK+A+  AL    LN  PG  I + KN+RVCGD
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFAL----LNTPPGSTIHIKKNIRVCGD 595

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFE 684
           CH  IK  SK++    +VRD  RFH F+
Sbjct: 596 CHTAIKLASKVVGREIIVRDTNRFHHFK 623



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 229/435 (52%), Gaps = 10/435 (2%)

Query: 2   NRVSFSLVSERQRLADSL-RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           N +  S +   +R  ++L + C+   LL  G  +H  +++  F  D+++ N L++MYAKC
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VF+KM +R+ V+WT L+ G+ Q+      L  F QM      PNEFTLS+ I
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA+        G Q+HG C+K GF+ N  VG++++D+Y++ G +++A  +FD + +++ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +WNA+IAG+     ++K L LF+ M   G  P  F++ S   AC S G +  G  +H ++
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           I SG    +      +L+D Y K G + +AR++FD + ++ V+SW+SL+  YAQ     E
Sbjct: 289 IKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
           A+  F ++R   ++ +     S++   +   L+++G   H Y      G+     +  ++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEAWHYVTV 404

Query: 359 VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           VD+  + G ++ A     EMP++     W  ++     H      +G +    + +++PD
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPD 462

Query: 418 GVAYLAVLSACSHSG 432
                 +L     SG
Sbjct: 463 DPGPHVILYNIYASG 477


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/587 (35%), Positives = 336/587 (57%), Gaps = 8/587 (1%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           S   N +  ++ +++     ++E G Q+H    + G  +N  +   +++ YS C  +  A
Sbjct: 53  SSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNA 112

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +FD +P  +L  WN +I  Y   G  +  + L+ +M E+G  PD FT    LKAC +L
Sbjct: 113 HHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSAL 172

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            ++G G  IH  +I SG+   V   +  +LVD Y KCGC+V+AR VFD I  +  + W+S
Sbjct: 173 STIGEGRVIHERVIRSGWERDV--FVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNS 230

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           ++  YAQ  +  E++ L  ++  + ++     L +++   AD A +  G++IH +  +  
Sbjct: 231 MLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG 290

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              +  V  +++DMY KCG +  A  LF  +  K VV+W  IITGY  HGLA EA+ LF 
Sbjct: 291 FQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFE 350

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +M+  + +PD + ++  L+ACS   L++E +  ++ +  D R+ P +EHY+C+VD LG  
Sbjct: 351 RMM-KEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHC 409

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G+LDEA +LI  M V P   +W  LL++C+ HG++EL     E L+ L+ D+  NYV+++
Sbjct: 410 GQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILA 469

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           N++A +G W    RLR+L   KG+KK    SW+EV  +++ F  GD +HP +  I+  L 
Sbjct: 470 NMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELK 529

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
            +E  M+E  G+V       HD++E+ K + +  HSE+LAI   L+    +  PG  + +
Sbjct: 530 RLEGLMREA-GYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLI----STLPGTRLLI 584

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLR+C DCH  IK +SKI +    VRD  R+H F  G+CSCGDYW
Sbjct: 585 TKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 218/420 (51%), Gaps = 9/420 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S     A  L  C     L+ G QLH  L ++G +++L L   L++ Y+ C  +  A  +
Sbjct: 56  SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHL 115

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FDK+ + N+  W  L+  +  NG  +  +SL+ QM    +KP+ FTL   +KA   LS++
Sbjct: 116 FDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G  IH   ++SG+E +  VG +++DMY+KCG + +A  +FD +  +  + WN+M+A Y
Sbjct: 176 GEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY 235

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G+ D+ L L  +M   G  P E T  + + +   +  +  G +IHGF    GF Y+ 
Sbjct: 236 AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYND 295

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           K  +  +L+D Y KCG +  A  +F+ + +K V+SW+++I GYA      EA++LF ++ 
Sbjct: 296 K--VKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM 353

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGL 367
           + + Q D       +   +   L+++G+ ++    +    ++ +V +   +VD+   CG 
Sbjct: 354 KEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVR-DCRINPTVEHYTCMVDLLGHCGQ 411

Query: 368 IDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +DEA +L  +M V  +   W  ++     HG  + A     K++  ++EPD      +L+
Sbjct: 412 LDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLI--ELEPDDSGNYVILA 469



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 13/292 (4%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           + + L  +   L   L+ CS    +  G  +H  +++ G+  D+ +   L+DMYAKCG +
Sbjct: 151 LEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCV 210

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  VFDK+++R+ V W +++  + QNG+    LSL C+M +  V+P E TL T I +S
Sbjct: 211 VDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSS 270

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             ++ + +G +IHG   + GF++N  V  ++IDMY+KCG +  A  +F+ +  K +++WN
Sbjct: 271 ADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWN 330

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           A+I GY + G + + L LF +M +  + PD  TF   L AC     +  G  ++  ++  
Sbjct: 331 AIITGYAMHGLAVEALDLFERMMKEAQ-PDHITFVGALAACSRGRLLDEGRALYNLMVRD 389

Query: 244 GFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVIS----WSSLI 289
                +   +     +VD    CG L EA   +DLI Q  V+     W +L+
Sbjct: 390 C---RINPTVEHYTCMVDLLGHCGQLDEA---YDLIRQMDVMPDSGVWGALL 435


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/575 (36%), Positives = 337/575 (58%), Gaps = 8/575 (1%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           I A     S+++   IH     S F  +  + NS+I +Y KCG + +A R+FD MPA+ +
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            +W ++IAGY      D+ L L   M      P+ FTF S LKA G+  S G G QIH  
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA- 189

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            +T  + +     +  +L+D Y +CG +  A  VFD +E K+ +SW++LI G+A++ +  
Sbjct: 190 -LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
             + +F +++    +   F  SS+    A    +EQGK +HA+  K    L   V N+I+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY K G + +A ++F+ +  K+VVTW  ++T + ++GL +EAV  F +M    V  + +
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            +L++L+ACSH GLV+E ++YF  +  +  ++P I+HY  +VD LGRAG L++A   I  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP+KP+ A+W  LL +CR+H + ++G+   + +  LD D+    V++ NI+A  G W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            R+RK+ ++ G+KK    SWVE++  +H F   DDTHP +E+I++   E+  ++++  G+
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA-GY 546

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V    Y L  + E+ ++  L+ HSEK+A+  AL+    N   G  IR+ KN+R+CGDCH 
Sbjct: 547 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALI----NMPLGATIRIMKNIRICGDCHS 602

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             + +SK+ K   VVRD  RFH F  G CSCGDYW
Sbjct: 603 AFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 226/419 (53%), Gaps = 6/419 (1%)

Query: 1   MNRVSFSLVSERQRLADSL-RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
           ++ V    ++   RL  SL   C++   LD    +H  L    F+  + L+N LI +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CG +  A  VFD M  R++ SWT+L+ G+ QN      L L   M     KPN FT ++ 
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +KA+G  +S   G QIH + +K  +  +  VG++++DMY++CGR++ A  +FD + +K+ 
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNA+IAG+   G  +  LL+F +MQ +G     FT++S   A   +G++  G  +H  
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAH 291

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I SG    +   +  +++D Y K G +++AR+VFD +++K V++W+S++  +AQ     
Sbjct: 292 MIKSG--ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR 349

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+  F ++R+  + ++     S++   +   LV++GKQ      +     +     ++V
Sbjct: 350 EAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVV 409

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           D+  + GL+++A     +MP+K     W  ++     H  AK  +G F    + +++PD
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPD 466



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 8/196 (4%)

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R L     +  S++   A +  ++  + IHA+ A         + NS++ +Y KCG + +
Sbjct: 58  RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-- 428
           A  +F+ MP +++ +WT +I GY ++ +  EA+GL   ML    +P+G  + ++L A   
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGA 177

Query: 429 -SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            + SG+ E+       L         +   S ++D   R GR+D A  + + +  K  ++
Sbjct: 178 SASSGIGEQ----IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS 233

Query: 488 IWQTLLSACRVHGDLE 503
            W  L++     GD E
Sbjct: 234 -WNALIAGFARKGDGE 248


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/517 (40%), Positives = 314/517 (60%), Gaps = 38/517 (7%)

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P++FT ++ +KAC S+ S+  G Q H ++I  GF   V  V+  +LV  Y +CG L 
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDV--VVQTALVHMYARCGSLE 62

Query: 269 EARRVFDLIEQKS-------------------------------VISWSSLILGYAQEEN 297
           +A  VFD + ++S                               V+SW+++I GYAQ   
Sbjct: 63  DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             E++ +F Q+R+  ++ D F++ S++   AD A +E G+Q HAY  +    LD  V ++
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +VDMY K G +++A ++F++MP +N V+W  IITG  +HG   +AV LF +ML   ++P+
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            ++++ VLSACSH+GLV E + YF+ +  +  + P + HY+C++D LGRAG LDEA+N I
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             MPV+P +++W  LL ACR+HG+ EL + + E LL ++      YV++SNI+A AG W+
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           +  ++RKL + +G+ K  G SW+EV   +H F  G+ +HP  ++IH+ L  + ++MK   
Sbjct: 363 DAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAA- 421

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+V    + L D++++ KE SL  HSEKLAI   ++    N  PG  IRV KNLRVCGDC
Sbjct: 422 GYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGII----NTNPGTTIRVAKNLRVCGDC 477

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  IK +S       VVRDA RFH F+ G CSCGDYW
Sbjct: 478 HTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 175/355 (49%), Gaps = 41/355 (11%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M    VKPN+FTLST +KA   ++S+E G Q H   +K GFE + VV  +++ MY++CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 164 INEAARMFDVMPAKSLITWNAM-------------------------------IAGYVLA 192
           + +A  +FD M  +S  TWNAM                               IAGY   
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           GY D+ L +F +M++ G   D F   S L AC  L ++  G Q H +++ SGF   +  V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDI--V 178

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LVD Y K G + +A +VFD + Q++ +SW+S+I G AQ     +A+ LF Q+ +  
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLI 368
           ++ +      ++   +   LV +G+       +    VP   D S    ++D+  + G +
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVP---DVSHYTCMIDLLGRAGCL 295

Query: 369 DEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           DEA    N MPV+ +V  W  ++     HG  + A  +   +L  +V+  G+  L
Sbjct: 296 DEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVL 350



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 34/341 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  ++ C+    L+ G Q H  ++KMGF  D+++   L+ MYA+CG +  A  VFDKM 
Sbjct: 13  LSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS 72

Query: 75  ER-------------------------------NVVSWTALMCGFLQNGNAKACLSLFCQ 103
           ER                               +VVSWTA++ G+ QNG     L++F Q
Sbjct: 73  ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  + +K + F + + + A   L+++E G Q H   ++SGF  + VVG++++DMY+K G 
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A ++FD MP ++ ++WN++I G    G  +  +LLF +M + G  P+E +F   L A
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C   G V  G      L+T  +           ++D   + GCL EA    + +  +  +
Sbjct: 253 CSHTGLVNEGRGYFN-LMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDV 311

Query: 284 S-WSSLILGYAQEENLAEAMELFRQLRERSLQVDG-FVLSS 322
           S W +L+       N   A  +   L    +Q+ G +VL S
Sbjct: 312 SVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLS 352



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S+R  +   L  C+    L+ G Q H  +V+ GF+ D+++ + L+DMYAK G M  AC V
Sbjct: 140 SDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQV 199

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FDKM +RN VSW +++ G  Q+G     + LF QM  + +KPNE +    + A      V
Sbjct: 200 FDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLV 259

Query: 130 ENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMI 186
             G     + M   +   P V +   +ID+  + G ++EA    + MP +  ++ W A++
Sbjct: 260 NEGRGYFNL-MTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318

Query: 187 AGYVLAGYSDKGLLLFRKMQEH 208
               + G ++    L +++ EH
Sbjct: 319 GACRIHGNTE----LAKRIAEH 336



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 33/221 (14%)

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           + ++ + F LS+++   A  A +EQGKQ H Y  K+    D  V  ++V MY +CG +++
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 371 A-------------------------------TELFNEMPVKNVVTWTVIITGYGKHGLA 399
           A                                +LF EM  ++VV+WT +I GY ++G  
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
            E++ +F +M    ++ D     +VLSAC+    +E  +++ + +         I   S 
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG-FALDIVVGSA 182

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +VD   ++G +++A  + + MP +  ++ W ++++ C  HG
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVS-WNSIITGCAQHG 222


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/679 (32%), Positives = 368/679 (54%), Gaps = 43/679 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++   L  G ++H  + ++G   D+ ++N L+ MY KCG +  A  VF+    +NV
Sbjct: 41  IQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV 100

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHG 137
            SWT L+    Q+G ++  L+LF +M    ++P+  + +  I A S     +  G  +H 
Sbjct: 101 FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHA 160

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           +  + GF+   V   S++ MYSKCG + E+ R F+ M   + ++WNAMIA +       +
Sbjct: 161 LLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAF---AEHRR 217

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GL   R +Q+         F   ++AC  +                        V+  +L
Sbjct: 218 GLEALRTLQK--------MFLEGIRACSDV------------------------VVGTTL 245

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           V+ Y KC  L +A   F  +++ ++I+W+ LI  Y Q     EAMELFR++    L++D 
Sbjct: 246 VNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDE 305

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               +++G       +E G+ IHA   + P +     + N I++MY KCG + +A  +F 
Sbjct: 306 VTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFK 365

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA-CSHSGLVE 435
            M   +V+ W  +I  YG+HG   EA+  +  M  + V PD   Y++V+ A C+++GL E
Sbjct: 366 SMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPE 425

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E+  YF  +  D  ++P   HY C+V+SLG+AGRL +A+ LI+ MP +P +  W + L+ 
Sbjct: 426 EAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLAN 485

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR HGD++ G+   +  +R+D +    YV ++ IHADAG + E  R+RKL   +G++K A
Sbjct: 486 CRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNA 545

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           GRS +++   ++ F  GD ++P +++I   L  ++K MK   G+   + +  HD++   K
Sbjct: 546 GRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSA-GYDPDMAHVAHDVEAGQK 604

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  L  HSE+LAI   ++    +  PG  +R+ KNLRVCGDCH   K  SKI +   +VR
Sbjct: 605 EPLLFAHSERLAIAFGII----STSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVR 660

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D+ RFH F+ G CSC D+W
Sbjct: 661 DSNRFHHFKNGSCSCKDFW 679


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/619 (36%), Positives = 368/619 (59%), Gaps = 21/619 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+    + GN    L L     S    P + T    I +    +S+ +  ++H   +++G
Sbjct: 45  LIQSLCKQGNLTQALELL----SLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENG 100

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +P +   +I+MYS    I+ A ++FD    +++  +NA+     LAG+ ++ L ++R
Sbjct: 101 FDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYR 160

Query: 204 KMQEHGEIPDEFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +M   G   D FT+T  LKAC +    +  +  G +IH  ++  G+   V   I  +LVD
Sbjct: 161 RMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVH--IMTTLVD 218

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL--RERSLQVDG 317
            Y K GC+  A  VF+ +  K+V+SWS++I  YA+     EA+ELFR+L    + L  + 
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELF 375
             + S++   A  A +EQG+ IH Y  +   GLD+   V +++V MY +CG ++    +F
Sbjct: 279 VTMVSVLQACAALAALEQGRLIHGYILR--KGLDSILPVISALVTMYARCGKLELGQRVF 336

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           ++M  ++VV+W  +I+ YG HG  K+A+G+F +M  + VEP  +++++VL ACSH+GLV+
Sbjct: 337 DQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E +  F+ +     + P +EHY+C+VD LGRA RL+EA  +IE+M ++P   +W +LL +
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+H ++EL       L  L+  N  NYV++++I+A+AG W+  +R++KL  ++GL+KV 
Sbjct: 457 CRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVP 516

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           GRSW+EV ++I+ F   D+ +P  E++H +L+++   +KEE G+V   K  L+D++   K
Sbjct: 517 GRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEE-GYVPQTKVVLYDLKAAEK 575

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  +  HSEKLA+   L+    N   G+VIR+ K+LR+C DCH F K +SK      +VR
Sbjct: 576 ERIVLGHSEKLAVAFGLI----NSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVR 631

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F  GVCSCGDYW
Sbjct: 632 DVNRFHHFRDGVCSCGDYW 650



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 199/371 (53%), Gaps = 12/371 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L C  +N LLD   ++H  L++ GF  D  L   LI+MY+    ++ A  VFDK   R +
Sbjct: 78  LSCTHQNSLLD-AQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTI 136

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQ 134
             + AL       G+ +  L+++ +M S  +  + FT +  +KA       +S +  G +
Sbjct: 137 YVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGRE 196

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G++    +  +++DMY+K G ++ A+ +F+ MP K++++W+AMIA Y   G 
Sbjct: 197 IHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGK 256

Query: 195 SDKGLLLFRK--MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           + + L LFR+  ++     P+  T  S L+AC +L ++  G  IHG+++  G   S+  V
Sbjct: 257 AFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD-SILPV 315

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           I+ +LV  Y +CG L   +RVFD ++++ V+SW+SLI  Y       +A+ +F ++    
Sbjct: 316 IS-ALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNG 374

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
           ++       S++G  +   LV++GK +   +  V  G+  SV +   +VD+  +   ++E
Sbjct: 375 VEPSPISFVSVLGACSHAGLVDEGKMLFN-SMHVAHGICPSVEHYACMVDLLGRANRLEE 433

Query: 371 ATELFNEMPVK 381
           A ++   M ++
Sbjct: 434 AAKIIENMRIE 444



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 146/267 (54%), Gaps = 6/267 (2%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           LL+ G ++H  +++ G+   + +   L+DMYAK G ++ A  VF++M  +NVVSW+A++ 
Sbjct: 190 LLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIA 249

Query: 87  GFLQNGNAKACLSLFCQ--MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
            + +NG A   L LF +  + +  + PN  T+ + ++A   L+++E G  IHG  ++ G 
Sbjct: 250 CYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGL 309

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
           +    V ++++ MY++CG++    R+FD M  + +++WN++I+ Y + G+  K + +F +
Sbjct: 310 DSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEE 369

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGSLVDFYVK 263
           M  +G  P   +F S L AC   G V  G  +   + +  G   SV+      +VD   +
Sbjct: 370 MTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHY--ACMVDLLGR 427

Query: 264 CGCLVEARRVFDLIE-QKSVISWSSLI 289
              L EA ++ + +  +     W SL+
Sbjct: 428 ANRLEEAAKIIENMRIEPGPKVWGSLL 454


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/657 (33%), Positives = 373/657 (56%), Gaps = 8/657 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           RQ +  +L  C +   ++ G + H  +VK+G   D  +   LIDMYAKCGE++ A  V+D
Sbjct: 113 RQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           KM   +  +   L+  + +NG       +F Q+G+   +PN +T ST +   G +S+++ 
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+H   +K  +     VGN+++ +YSKCG + EA  +F+ +  +++I+W A I G+  
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQ 292

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   K L  F  M+E G  P+EFTF+  L +CG +     G   H  +I  G    V  
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV-- 350

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            +  +++D Y   G + EA + F  +    S +SW++LI GY   E + +AME F ++ +
Sbjct: 351 FVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +  + F  S++    + F  +    QIH+   K     +  V++S+++ Y +CG ++ 
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLEN 470

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A ++F ++   +VV+W  II  Y ++G   +A+ L RKM+ +  +P    +L VLSACSH
Sbjct: 471 AVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH 530

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           SGLV+E QE+F  +  D  ++P   H SC+VD LGRAG+L+ A + I+ + +KP+ +IW+
Sbjct: 531 SGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWR 590

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
            LL+ACR + +L++   V E +L L+ ++   YV +SN++A+ G W + E  R+L   K 
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKE 650

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           + K  G SW+EV+ +++ F+  D  HP   K+++ L ++ +++ +++G+       LH  
Sbjct: 651 ISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQI-QDIGYSPPTTTVLHPE 709

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
             + KE+ +  HSEKLA+   L    L+  PGK IRV KNLRVC DC+  +K +S+I
Sbjct: 710 SRQPKEQLILYHSEKLAVCFGL----LSLPPGKPIRVLKNLRVCLDCYSTMKYISRI 762



 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 178/555 (32%), Positives = 297/555 (53%), Gaps = 33/555 (5%)

Query: 7    SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
            +  S     A ++   +++  L  G  LH  LV +G +        L+  Y +CG+++ A
Sbjct: 798  TFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNA 857

Query: 67   CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              +FDK+   N+  W  L     + G  +  LS F +M    ++PN+F L + +KA G L
Sbjct: 858  RKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 917

Query: 127  SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            S    G  +H + +K+ FE +  + +++I MYSKCG + +A R+FD +  K L+  NAM+
Sbjct: 918  SDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMV 977

Query: 187  AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            +GY   G+  + L L +KMQ+ G  P+  ++ + +     +G     +++   +  +G  
Sbjct: 978  SGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV- 1036

Query: 247  YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                                            +  V+SW+S+I G+ Q  +  E  + F+
Sbjct: 1037 --------------------------------EPDVVSWTSVISGFVQNFHNHEGFDAFK 1064

Query: 307  QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            ++ ++        +SS++    + A +  GK+IH YA  +    D  V +++VDMY KCG
Sbjct: 1065 EMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCG 1124

Query: 367  LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             I EA  LF  MP +N VTW  +I GY  HG   EA+ LF +M   D + D + + AVL+
Sbjct: 1125 YISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLN 1184

Query: 427  ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
            ACSH+G+VE  +  F ++    R++PR+EHY+C+VD LGRAG+L EA +LI++MPV+P  
Sbjct: 1185 ACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDK 1244

Query: 487  AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
             +W  LL ACR HG++EL     E L  L+ ++P + +++SN++ADAG W    +++K+ 
Sbjct: 1245 FVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMM 1304

Query: 547  RSKGLKKVAGRSWVE 561
            + +   K  G SW+E
Sbjct: 1305 KQRKFGKFPGCSWIE 1319



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 7/301 (2%)

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P      S L  CG  G V  G + H F++  G        +  SL+D Y KCG + 
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGL--GSDEFVCTSLIDMYAKCGEVD 165

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            A RV+D +      + + LI  YA+     +A ++F Q+     + + +  S+M+ V  
Sbjct: 166 SAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCG 225

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             + +++GKQ+HA+  K+    +T+V N+++ +Y KCG+++EA  +F  +  +N+++WT 
Sbjct: 226 TISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTA 285

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE--SQEYFSRLCN 446
            I G+ +HG  K+A+  F  M    +EP+   +  VL++C   G V++      F     
Sbjct: 286 SINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC---GCVKDFIDGRMFHTQVI 342

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
            K M   +   + I+D     G +DEA+   + M    S   W  L++   ++  +E   
Sbjct: 343 KKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAM 402

Query: 507 E 507
           E
Sbjct: 403 E 403



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 108/258 (41%), Gaps = 35/258 (13%)

Query: 297  NLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            N A    ++R +   R+ Q      +  + ++A    + +G+ +HA+   +     T  +
Sbjct: 782  NRANVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFA 841

Query: 356  NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
              ++  Y +CG +  A +LF+++P  N+  W V+     + G  +EA+  F +M  + + 
Sbjct: 842  AKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLR 901

Query: 416  PDGVAYLAVLSACS-----------HSGLVEESQE----------YFSRLCNDKRMKPRI 454
            P+     ++L AC            H+ +++ S E          Y    C       R+
Sbjct: 902  PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRV 961

Query: 455  EHY---------SCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDL 502
              +         + +V    + G + EA BL++ M    VKP++  W TL++     GD 
Sbjct: 962  FDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK 1021

Query: 503  ELGREVGEILLRLDGDNP 520
             +  EV   L+  +G  P
Sbjct: 1022 SMVSEVFR-LMTANGVEP 1038


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/716 (32%), Positives = 379/716 (52%), Gaps = 77/716 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALMCGFLQNGNAKACLSLF-CQMGSS 107
             L+  YA  G +  A + FD + +  R+ V   A++  + +  +A   +++F   + S 
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 108 SVKPNEFTLSTNIKASGVLS--SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI- 164
           S++P++++ +  + A+G L   SV +  Q+    +KSG      V N+++ +Y KC  + 
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 165 --NEAARMFDVMPAKSLITWNAMIAGYV--------------------------LAGYSD 196
              +A ++ D MP K  +TW  M+ GYV                          ++GY  
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 197 KGLL-----LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL--ITSGFPYSV 249
            G++     LFR+M       DEFTFTS L AC + G    G  +HG +  +   F    
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME------ 303
              +  +LV  Y KCG +  ARR+FD ++ K V+SW++++ GY +   L +A+E      
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 304 -------------------------LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
                                    LF ++R   ++   +  +  +    +   ++ GKQ
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +H +  ++      S  N+++ MY +CG + EA  +F  MP  + V+W  +I+  G+HG 
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            +EA+ LF +M+ + + PD +++L VL+AC+HSGLV+E  +YF  +  D  + P  +HY+
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYT 571

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
            ++D LGRAGR+ EA++LI++MP +P+ +IW+ +LS CR  GD+ELG    + L ++   
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 519 NPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPL 578
           +   Y+++SN ++ AG W +  R+RKL R +G+KK  G SW+E   ++H F  GD  HP 
Sbjct: 632 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPE 691

Query: 579 TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN 638
             K+++ L  +  RM+ +LG+V   K  LHD++   KE  L  HSE+LA+G  L    L 
Sbjct: 692 AHKVYKFLEMVGARMR-KLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGL----LK 746

Query: 639 EQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             PG  + V KNLR+C DCH  +  +SK +    VVRD  RFH F+ G CSCG+YW
Sbjct: 747 LPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 83/443 (18%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           PV   S++  Y+  GR+  A   FD +P   +  +  NA+I+ Y  A ++   + +FR +
Sbjct: 88  PVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSL 147

Query: 206 QEHGEI-PDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
              G + PD+++FT+ L A G L   SV    Q+   ++ SG    +   ++ +LV  Y+
Sbjct: 148 LASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLS--VSNALVALYM 205

Query: 263 KCGCL---VEARRVFDLIEQKSVISWSSLILGYAQEENLA-------------------- 299
           KC  L    +AR+V D +  K  ++W+++++GY +  ++                     
Sbjct: 206 KCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAM 265

Query: 300 -----------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK--- 345
                      EA ELFR++    + +D F  +S++   A+      GK +H    +   
Sbjct: 266 ISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQP 325

Query: 346 --VPSGLDTSVSNSIVDMYLKCGLI-------------------------------DEAT 372
             VP      V+N++V +Y KCG I                               D+A 
Sbjct: 326 NFVPEAA-LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           E+F EMP KN ++W V+++GY   G +++A+ LF +M  +DV+P    Y   +SAC   G
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELG 444

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            ++  ++    L      +      + ++    R G + EA  +   MP   S++ W  +
Sbjct: 445 SLKHGKQLHGHLVQ-LGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS-WNAM 502

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           +SA   HG    GRE  E+  R+
Sbjct: 503 ISALGQHGH---GREALELFDRM 522



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 47/340 (13%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF----DLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  C+      +G  +HG + ++  +F     L +NN L+ +Y+KCG +  A  +FD M 
Sbjct: 301 LSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMK 360

Query: 75  ERNVVSWTALMCGFLQN-------------------------------GNAKACLSLFCQ 103
            ++VVSW  ++ G++++                               G ++  L LF +
Sbjct: 361 SKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNR 420

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M +  VKP ++T +  I A G L S+++G Q+HG  ++ GFE +   GN++I MY++CG 
Sbjct: 421 MRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGA 480

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + EA  MF VMP    ++WNAMI+     G+  + L LF +M   G  PD  +F + L A
Sbjct: 481 VKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540

Query: 224 CGSLGSVGGGTQI-----HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           C   G V  G Q        F I  G  +  +      L+D   + G + EAR +   + 
Sbjct: 541 CNHSGLVDEGFQYFESMKRDFGIIPGEDHYTR------LIDLLGRAGRIGEARDLIKTMP 594

Query: 279 QKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
            +   S W +++ G     ++        QL + + Q DG
Sbjct: 595 FEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG 634



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  C +   L +G QLHG LV++GF       N LI MYA+CG +  A  +F  M  
Sbjct: 434 AGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPN 493

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+ +  L LF +M +  + P+  +  T + A      V+ G Q 
Sbjct: 494 IDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ- 552

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLA 192
           +   MK  F   P   +   +ID+  + GRI EA  +   MP +   + W A+++G   +
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612

Query: 193 GYSDKGL----LLFRKMQEH 208
           G  + G      LF+   +H
Sbjct: 613 GDMELGAHAADQLFKMTPQH 632


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/646 (35%), Positives = 364/646 (56%), Gaps = 10/646 (1%)

Query: 33  QLHGALVKMGFSFDLMLN--NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H   VK+GF  +L L   N L+  Y +   ++ AC +F+++L+++ V++  L+ G+ +
Sbjct: 162 QVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEK 221

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G     + LF +M  S  KP++FT S  +KA   L     G Q+HG+ + +GF  +  V
Sbjct: 222 DGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASV 281

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN I+  YSK  R+ E   +F+ MP    +++N +I+ Y  A   ++ L LFR+MQ  G 
Sbjct: 282 GNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
               F F + L    +L S+  G Q+H   I +     +   +  SLVD Y KC    EA
Sbjct: 342 DRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH--VGNSLVDMYAKCEMFDEA 399

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             +F  + Q+S +SW++LI GY Q+      ++LF ++R  +L+ D    ++++   A F
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +  GKQ+HA+  +  +  +    + +VDMY KCG I +A ++F EMP +N V+W  +I
Sbjct: 460 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 519

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + Y  +G  + A+G F KM+   ++PD V+ L VL ACSH G VE+  E+F  +     +
Sbjct: 520 SAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGI 579

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P+ +HY+C++D LGR GR  EA+ L++ MP +P   +W ++L+ACR++ +  L     E
Sbjct: 580 TPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAE 639

Query: 511 ILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
            L  ++   +   YV MSNI+A AG W     ++K  R +G+KKV   SWVEV+ +IH F
Sbjct: 640 QLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVF 699

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              D THP  ++I + + E+   ++ E G+       + DI E+ K ESL+ HSE+LA+ 
Sbjct: 700 SSNDQTHPNGDEIVKKINELTTEIERE-GYKPDTSSVVQDIDEQMKIESLKYHSERLAVA 758

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
            AL+    +   G  I V KNLR C DCH  IK +SKI+K V   +
Sbjct: 759 FALI----STPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 230/456 (50%), Gaps = 6/456 (1%)

Query: 50  NNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV 109
            N +I  Y K G+++ A  +FD M +R VV+WT LM  +  N +      LF QM  S  
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN--PVVGNSIIDMYSKCGRINEA 167
            P+  T +T +             Q+H   +K GF+ N    V N ++  Y +  R++ A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F+ +  K  +T+N +I GY   G   + + LF KM++ G  P +FTF+  LKA   L
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                G Q+HG  +T+GF  S    +   ++ FY K   ++E R +F+ + +   +S++ 
Sbjct: 258 HDFALGQQLHGLSVTTGF--SRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNV 315

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I  Y+Q E   E++ LFR+++        F  ++M+ + A+ + ++ G+Q+H  A    
Sbjct: 316 VISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVAT 375

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
           +     V NS+VDMY KC + DEA  +F  +  ++ V+WT +I+GY + GL    + LF 
Sbjct: 376 ADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFT 435

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           KM   ++  D   +  VL A +    +   ++  + +     ++  +   S +VD   + 
Sbjct: 436 KMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKC 494

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           G + +A  + E MP + +++ W  L+SA   +GD E
Sbjct: 495 GSIKDAVQVFEEMPDRNAVS-WNALISAYADNGDGE 529



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 197/380 (51%), Gaps = 13/380 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG  V  GFS D  + N ++  Y+K   +     +F++M E + VS+  ++  + Q
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  L+LF +M         F  +T +  +  LSS++ G Q+H   + +  +    V
Sbjct: 323 AEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHV 382

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GNS++DMY+KC   +EA  +F  +  +S ++W A+I+GYV  G    GL LF KM+    
Sbjct: 383 GNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANL 442

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
             D+ TF + LKA     S+  G Q+H F+I SG   +++ V +GS LVD Y KCG + +
Sbjct: 443 RADQSTFATVLKASAGFASLLLGKQLHAFIIRSG---NLENVFSGSGLVDMYAKCGSIKD 499

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A +VF+ +  ++ +SW++LI  YA   +   A+  F ++ +  LQ D   +  ++   + 
Sbjct: 500 AVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSH 559

Query: 330 FALVEQGKQIHAYAAKVP-SGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
              VEQG +   + A  P  G+     +   ++D+  + G   EA +L +EMP + + + 
Sbjct: 560 CGFVEQGTEF--FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 617

Query: 386 WTVIITG---YGKHGLAKEA 402
           W+ ++     Y    LA+ A
Sbjct: 618 WSSVLNACRIYKNQSLAERA 637



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 153/302 (50%), Gaps = 2/302 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G Q+H   +       L + N L+DMYAKC   + A  +F  + +R+ VSWTAL+ G
Sbjct: 361 LQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISG 420

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           ++Q G   A L LF +M  ++++ ++ T +T +KAS   +S+  G Q+H   ++SG   N
Sbjct: 421 YVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLEN 480

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
              G+ ++DMY+KCG I +A ++F+ MP ++ ++WNA+I+ Y   G  +  +  F KM +
Sbjct: 481 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQ 540

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  +    L AC   G V  GT+     ++  +  + K      ++D   + G  
Sbjct: 541 SGLQPDSVSILGVLIACSHCGFVEQGTEFFQ-AMSPIYGITPKKKHYACMLDLLGRNGRF 599

Query: 268 VEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
            EA ++ D +  +   I WSS++      +N + A     QL       D     SM  +
Sbjct: 600 AEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNI 659

Query: 327 FA 328
           +A
Sbjct: 660 YA 661



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 169/353 (47%), Gaps = 12/353 (3%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N V  N++I  Y K G ++ A  +FD MP ++++TW  ++  Y    + D+   LFR+M 
Sbjct: 74  NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
               +PD  TFT+ L  C          Q+H F +  GF  ++   +   L+  Y +   
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A  +F+ I  K  +++++LI GY ++    EA+ LF ++R+   +   F  S ++  
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253

Query: 327 FA---DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
                DFAL   G+Q+H  +       D SV N I+  Y K   + E   LFNEMP  + 
Sbjct: 254 VVGLHDFAL---GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDF 310

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS-ACSHSGLVEESQEYFS 442
           V++ V+I+ Y +    +E++ LFR+M     +     +  +LS A + S L    Q +  
Sbjct: 311 VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQ 370

Query: 443 RLCNDKRMKPRIEHY-SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +         I H  + +VD   +    DEA+ + +S+  + +++ W  L+S
Sbjct: 371 AIV---ATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS-WTALIS 419



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 2/182 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +L +++   A  L+  +    L  G QLH  +++ G   ++   + L+DMYAKCG +  A
Sbjct: 441 NLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 500

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VF++M +RN VSW AL+  +  NG+ +A +  F +M  S ++P+  ++   + A    
Sbjct: 501 VQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHC 560

Query: 127 SSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
             VE G +    M    G          ++D+  + GR  EA ++ D MP     I W++
Sbjct: 561 GFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 620

Query: 185 MI 186
           ++
Sbjct: 621 VL 622



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 130/335 (38%), Gaps = 63/335 (18%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN-------------- 382
           +++ A   K     DT  SN  V+  L+ G +  A ++++EMP KN              
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 383 -----------------VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
                            VVTWT+++  Y  +    EA  LFR+M      PD V +  +L
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 426 SACSHS---GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
             C+ +     V +   +  +L  D  +   +   + ++ S     RLD A  L E +  
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTV--CNVLLKSYCEVRRLDLACVLFEEILD 206

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAG--SWNE 538
           K S+  + TL++     G   L  E   + L++   G  P ++     + A  G   +  
Sbjct: 207 KDSVT-FNTLITGYEKDG---LYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFAL 262

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--E 596
            ++L  L+ + G  + A      V  +I  FY            H  ++E      E  E
Sbjct: 263 GQQLHGLSVTTGFSRDA-----SVGNQILHFYSK----------HDRVLETRNLFNEMPE 307

Query: 597 LGFV-YGVKYALHDIQEESKEESLRVHSEKLAIGL 630
           L FV Y V  + +  Q E  EESL +  E   +G 
Sbjct: 308 LDFVSYNVVISSYS-QAEQYEESLNLFREMQCMGF 341


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/548 (38%), Positives = 329/548 (60%), Gaps = 7/548 (1%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I+ + + G ++ A ++FD M  +++ TWNAM++G +   +++ GL LFR+M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E G +PDEFT  S L+ C  L +   G Q+H +++  G+ +++  V+  SL   Y+K G 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNL--VVGSSLAHMYMKSGS 139

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L E  +V   +  ++V++W++LI G AQ  +    ++L+  ++   L+ D   L S++  
Sbjct: 140 LGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISS 199

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A+ A + QG+QIHA A K  +    +V +S++ MY KCG ++++ +   +    + V W
Sbjct: 200 SAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           + +I  YG HG  +EAV LF +M  + +  + V +L++L ACSH+GL E+   +F  +  
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              +KPR+EHY+C+VD LGR+G LDEA+ +I SMP++  + IW+TLLSACR+H + ++  
Sbjct: 320 KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMAT 379

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              E +LRL+  +   YV++SNIHA A  W +  ++R   R + +KK  G SW+EV   +
Sbjct: 380 RTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRV 439

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
             F  GD +HP++E+I   L E+ + MK   G+V       HD   E KE SL  HSEKL
Sbjct: 440 FQFSMGDKSHPMSEEIDLYLKELMEEMKLR-GYVPDTATVFHDTDSEEKENSLVNHSEKL 498

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           AI   L    +N  PG  IRV KNLR+C DCH  IK +S I     +VRD +RFH F+ G
Sbjct: 499 AIAFGL----MNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHG 554

Query: 687 VCSCGDYW 694
            CSCGDYW
Sbjct: 555 KCSCGDYW 562



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 192/384 (50%), Gaps = 8/384 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++M +N LI+ + + G+++ A  VFD+MLERNV +W A++ G +Q    +  L LF +M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                P+EFTL + ++    L +   G Q+H   +K G+E+N VVG+S+  MY K G + 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E  ++   M  ++++ WN +IAG    G+ +  L L+  M+  G  PD+ T  S + +  
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G QIH   I +G   +V   +  SL+  Y KCGCL ++ +     E    + W
Sbjct: 202 ELATLFQGQQIHAEAIKAGANSAV--AVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           SS+I  Y       EA+ LF Q+ +  L  +     S++   +   L E+G        +
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
              GL   + +   +VD+  + G +DEA  +   MP++ +VV W  +++    H  A  A
Sbjct: 320 -KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMA 378

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
                ++L   + P   A   +LS
Sbjct: 379 TRTAEEIL--RLNPQDSATYVLLS 400



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 6/278 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR C+       G Q+H  ++K G+ F+L++ + L  MY K G +     V   M 
Sbjct: 92  LGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMR 151

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RNVV+W  L+ G  QNG+ +  L L+  M  S ++P++ TL + I +S  L+++  G Q
Sbjct: 152 IRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQ 211

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+G      V +S+I MYSKCG + ++ +          + W++MIA Y   G 
Sbjct: 212 IHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGR 271

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ + LF +M++ G   ++ TF S L AC   G    G    GF       Y +K  + 
Sbjct: 272 GEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGM---GFFKLMVEKYGLKPRLE 328

Query: 255 --GSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLI 289
               +VD   + GCL EA  +   +  +  V+ W +L+
Sbjct: 329 HYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLL 366



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 42/208 (20%)

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE----- 415
           MY K G I EA   FN MP++N+++  ++I G+ +HG    A+ +F +ML  +V      
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 416 --------------------------PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
                                     PD     +VL  C  +GL      Y  +  +   
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGC--AGL---RASYAGKQVHAYV 115

Query: 450 MKPRIEHYSCIVDSLG----RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +K   E    +  SL     ++G L E + +I++M ++  +A W TL++    +G  E  
Sbjct: 116 LKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVA-WNTLIAGNAQNGHFEGV 174

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADA 533
            ++   ++++ G  P    ++S I + A
Sbjct: 175 LDLYN-MMKMSGLRPDKITLVSVISSSA 201


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/621 (36%), Positives = 365/621 (58%), Gaps = 3/621 (0%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
            S    +  +L  C        G ++H A++K   SF++ + N LI MYA+CG+M  A  
Sbjct: 261 ASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGR 320

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +   M   +VV+W +L+ G++QN   K  L  FC M ++  KP+E +L++ I ASG LS+
Sbjct: 321 ILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSN 380

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +  GM++H   +K G++ N +VGN++IDMYSKC       R F +M  K LI+W  +IAG
Sbjct: 381 LLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAG 440

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y L     + L LFR + +     DE    S L+AC  L S+    +IH  ++  G    
Sbjct: 441 YALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL--- 497

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           + TVI   LVD Y KC  +  A RVF+ I+ K V+SW+S+I   A   N  EA+ELFR++
Sbjct: 498 IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRM 557

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            E  L  D   L  ++   A  + +++G++IH Y  +    L+ S++ ++VDMY  CG +
Sbjct: 558 AETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDL 617

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A  +F+ +  K ++ +T +I  YG HG  K +V LF KM  ++V PD +++LA+L AC
Sbjct: 618 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYAC 677

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH+GL++E + +   +  + +++P  EHY C+VD LGRA  + EA   ++ M  +P+  +
Sbjct: 678 SHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEV 737

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  LL+ACR H + E+G    + LL L+  NP N V++SN+ A+ G WN+ E++R   ++
Sbjct: 738 WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 797

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
            G++K  G SW+E+D ++H F   D +HP T++I++ L E+ ++++ E G++   K+ LH
Sbjct: 798 SGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGYLADTKFILH 857

Query: 609 DIQEESKEESLRVHSEKLAIG 629
           ++ E  K + L  HSE+LAI 
Sbjct: 858 NVDEGEKVQMLHGHSERLAIA 878



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 253/527 (48%), Gaps = 25/527 (4%)

Query: 3   RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           R   S +     +   ++  S NL         G L +     D+  NN  I+ YA   E
Sbjct: 51  RPKLSRIQTNPSIGKPVQVPSPNL-----ASFDGGLNEAFQRLDVNGNNSPIEAYAYLLE 105

Query: 63  MNGAC------AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           + G         VFD+M +R   +W AL+  ++ NG   + L ++  M    V  + ++ 
Sbjct: 106 LCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSF 165

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
              +KA G L  + +G ++H M +K GF     + N+++ MY+K   ++ A R+FD    
Sbjct: 166 PVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQE 225

Query: 177 K-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           K   + WN++++ Y  +G S + L LFR+MQ  G   + +T  S L AC        G +
Sbjct: 226 KGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKE 285

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           IH  ++ S   +S +  +  +L+  Y +CG ++EA R+  L+    V++W+SLI GY Q 
Sbjct: 286 IHAAVLKS--THSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQN 343

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-- 353
               EA++ F  +     + D   L+S++      + +  G ++HAY  K   G D++  
Sbjct: 344 LMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIK--HGWDSNLL 401

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V N+++DMY KC L       F  M  K++++WT II GY  +    EA+ LFR +    
Sbjct: 402 VGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKR 461

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           +E D +   ++L ACS    +   +E    +     +   I++   +VD  G+   +  A
Sbjct: 462 MEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNE--LVDVYGKCRNMGYA 519

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
             + ES+  K  ++ W +++S+  ++G+    +EL R + E  L  D
Sbjct: 520 SRVFESIKGKDVVS-WTSMISSSALNGNENEAVELFRRMAETGLLAD 565


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/662 (34%), Positives = 370/662 (55%), Gaps = 40/662 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A ++F+ + E N++ W  +  G   N ++   L L+  M S  + PN ++    +K+   
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR---------------------- 163
             ++  G QIHG  +K G++ +  V  S+I MY++ GR                      
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 164 ---------INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                    IN A ++FD +  K +++WNAMI+GYV      + L L++ M +    PDE
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + + AC   GS+  G Q+H ++   GF  ++K  I   L+D Y KCG +  A  +F
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIK--IVNVLIDLYSKCGEVETACGLF 255

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             + +K VISW++LI G+       EA+ LF+++       +   + S++   A    ++
Sbjct: 256 QGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 315

Query: 335 QGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+ IH Y  K   G+   +S+  S++DMY KCG I+ A ++F+ M  +++ +W  +I G
Sbjct: 316 IGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFG 375

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +  HG A  A  LF KM  + ++PD + ++ +LSACSHSG+++  +  F  +  D ++ P
Sbjct: 376 FAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITP 435

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY C++D LG  G   EAK +I +MP++P   IW +LL AC++H ++ELG    + L
Sbjct: 436 KLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNL 495

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           ++++ +NP +YV++SNI+A AG W++  ++R L   KG+KK  G S +E+D  +H F  G
Sbjct: 496 IKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIG 555

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D  HP   +I+++L EME  M+E  GFV      L +++EE KE +LR HSEKLAI   L
Sbjct: 556 DKFHPRNREIYRMLEEMEMLMEET-GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 614

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    + +PG  + + KNLRVC +CHE  K +SKI K   + RD TR H  + GV SC D
Sbjct: 615 I----STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHD 670

Query: 693 YW 694
           YW
Sbjct: 671 YW 672



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 229/507 (45%), Gaps = 72/507 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K+  L  G Q+HG ++K+G+  D+ +N  LI MYA+ G +
Sbjct: 57  ISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRL 116

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNG------------------------------- 92
             A  VFD+   R+VVS+TAL+ G+   G                               
Sbjct: 117 EDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETC 176

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L L+  M  ++VKP+E T+ T + A     S+E G Q+H      GF  N  + N
Sbjct: 177 NFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVN 236

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +ID+YSKCG +  A  +F  +  K +I+WN +I G+       + LLLF++M   GE P
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A++
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 356

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +  +S+ SW+++I G+A       A +LF ++R+  +  D      ++   +   +
Sbjct: 357 VFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGM 416

Query: 333 VEQGKQIHAYAA---KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
           ++ G+ I    +   K+   L+      ++D+   CGL  EA E+   MP          
Sbjct: 417 LDLGRHIFRSMSQDYKITPKLEH--YGCMIDLLGHCGLFKEAKEMIRTMP---------- 464

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
                                   +EPDGV + ++L AC     VE  + Y   L   + 
Sbjct: 465 ------------------------MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 500

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNL 476
             P    Y  + +    AGR D+   +
Sbjct: 501 ENP--GSYVLLSNIYATAGRWDQVAKI 525



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 185/371 (49%), Gaps = 39/371 (10%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           ++ A  +F+ +   +L+ WN M  G+ L   S   L L+  M   G +P+ ++F   LK+
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE-------------- 269
           C    ++  G QIHG ++  G  Y +   +  SL+  Y + G L +              
Sbjct: 75  CAKSKALIEGQQIHGHVLKLG--YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132

Query: 270 -----------------ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
                            AR++FD I  K V+SW+++I GY +  N  EA+EL++ + + +
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN 192

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ D   + +++   A    +E G+Q+H++      G +  + N ++D+Y KCG ++ A 
Sbjct: 193 VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETAC 252

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            LF  +  K+V++W  +I G+    L KEA+ LF++ML     P+ V  L+VL AC+H G
Sbjct: 253 GLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLG 312

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYS---CIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
            ++  +  +  +  +KR+K      S    ++D   + G ++ AK + +SM  + S++ W
Sbjct: 313 AIDIGR--WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR-SLSSW 369

Query: 490 QTLLSACRVHG 500
             ++    +HG
Sbjct: 370 NAMIFGFAMHG 380


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/716 (32%), Positives = 378/716 (52%), Gaps = 77/716 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSS 107
             L+  YA    +  A + FD +    R+ V   A++  + +  +A   +++F   + S 
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 108 SVKPNEFTLSTNIKASGVLS--SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR-- 163
           S++P++++ +  + A G L   SV +  Q+H   +KSG      V N+++ +Y KC    
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 164 -INEAARMFDVMPAKSLITW-------------------------------NAMIAGYVL 191
              +A ++ D MP K  +TW                               NAMI+GYV 
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI--TSGFPYSV 249
           +G + +   LFR+M       DEFTFTS L AC ++G    G  +HG +I     F    
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME------ 303
              +  +LV FY KCG +  ARR+FD +  K V+SW++++ GY +   L +A+E      
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 304 -------------------------LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
                                    LF ++R  +++   +  +  +    +   ++ GKQ
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +H +  ++      S  N+++ MY +CG + EA  +F  MP  + V+W  +I+  G+HG 
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            +EA+ LF +M+ + + PD +++L VL+AC+HSGLV+E   YF  +  D  + P  +HY+
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
            ++D LGRAGR+ EA++LI++MP +P+ +IW+ +LS CR  GD+ELG    + L ++   
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631

Query: 519 NPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPL 578
           +   Y+++SN ++ AG W +  R+RKL R +G+KK  G SW+E   ++H F  GD  HP 
Sbjct: 632 HDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPE 691

Query: 579 TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN 638
             ++++ L  +  +M+ +LG+V   K  LHD++   KE  L  HSE+LA+G  L    LN
Sbjct: 692 AHEVYKFLEMVGAKMR-KLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGL----LN 746

Query: 639 EQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             PG  + V KNLR+C DCH  I  +SK +    VVRD  RFH F+ G CSCG+YW
Sbjct: 747 LPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 77/442 (17%)

Query: 24  KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC----------------------- 60
            N+ + +  QLH +++K G    L + N L+ +Y KC                       
Sbjct: 171 PNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLT 230

Query: 61  -----------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV 109
                      G++  A +VF+++  +  V W A++ G++ +G A     LF +M    V
Sbjct: 231 WTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERV 290

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRIN 165
             +EFT ++ + A   +    +G  +HG  ++    + P     V N+++  YSKCG I 
Sbjct: 291 PLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIA 350

Query: 166 EAARMFDVMPAKSLITWNA-------------------------------MIAGYVLAGY 194
            A R+FD M  K +++WN                                M++GYV  G+
Sbjct: 351 VARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGF 410

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  L LF KM+     P ++T+   + ACG LG++  G Q+HG ++  GF  S      
Sbjct: 411 AEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGS--NSAG 468

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y +CG + EA  +F ++     +SW+++I    Q  +  EA+ELF ++    + 
Sbjct: 469 NALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIY 528

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEA 371
            D     +++       LV++G +      +   +  G D      ++D+  + G I EA
Sbjct: 529 PDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDH--YTRLIDLLGRAGRIGEA 586

Query: 372 TELFNEMPVKNVVT-WTVIITG 392
            +L   MP +   + W  I++G
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSG 608



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 62/368 (16%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF----DLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  C+   L  +G  +HG ++++  +F     L +NN L+  Y+KCG +  A  +FD M 
Sbjct: 301 LSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMT 360

Query: 75  ERNVVSWTALMCGFLQN-------------------------------GNAKACLSLFCQ 103
            ++VVSW  ++ G++++                               G A+  L LF +
Sbjct: 361 LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNK 420

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M S +VKP ++T +  I A G L ++++G Q+HG  ++ GFE +   GN++I MY++CG 
Sbjct: 421 MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + EA  MF VMP    ++WNAMI+     G+  + L LF +M   G  PD  +F + L A
Sbjct: 481 VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540

Query: 224 CGSLGSVGGGTQIHGFLITSGFPY--SVKT---VIAGS-----LVDFYVKCGCLVEARRV 273
           C            H  L+  GF Y  S+K    +I G      L+D   + G + EAR +
Sbjct: 541 CN-----------HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589

Query: 274 FDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQVDG--FVLS---SMMGVF 327
              +  +   S W +++ G     ++        QL + + Q DG   +LS   S  G +
Sbjct: 590 IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCW 649

Query: 328 ADFALVEQ 335
            D A V +
Sbjct: 650 VDAARVRK 657



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 196/443 (44%), Gaps = 83/443 (18%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           PV   S++  Y+   R+  A   FD +P   +  +  NA+I+ Y  A ++   + +FR +
Sbjct: 88  PVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSL 147

Query: 206 QEHGEI-PDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
              G + PD+++FT+ L A G L   SV    Q+H  ++ SG   ++   +  +LV  Y+
Sbjct: 148 LASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALS--VCNALVALYM 205

Query: 263 KC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-------------------- 299
           KC       +AR+V D +  K  ++W+++++GY +  ++                     
Sbjct: 206 KCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAM 265

Query: 300 -----------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK--- 345
                      EA ELFR++    + +D F  +S++   A+  L   GK +H    +   
Sbjct: 266 ISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQP 325

Query: 346 --VPSGLDTSVSNSIVDMYLKCGLI-------------------------------DEAT 372
             VP      V+N++V  Y KCG I                               D+A 
Sbjct: 326 NFVPEAA-LPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           E+F EMP KN ++W V+++GY   G A++A+ LF KM  ++V+P    Y   ++AC   G
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELG 444

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            ++  ++    +      +      + ++    R G + EA  +   MP   S++ W  +
Sbjct: 445 ALKHGKQLHGHIVQ-LGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVS-WNAM 502

Query: 493 LSACRVHGDLELGREVGEILLRL 515
           +SA   HG    GRE  E+  R+
Sbjct: 503 ISALGQHGH---GREALELFDRM 522



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  C +   L +G QLHG +V++GF       N LI MYA+CG +  A  +F  M  
Sbjct: 434 AGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPN 493

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+ +  L LF +M +  + P+  +  T + A      V+ G + 
Sbjct: 494 IDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR- 552

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLA 192
           +   MK  F   P   +   +ID+  + GRI EA  +   MP +   + W A+++G   +
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612

Query: 193 GYSDKGL----LLFRKMQEH 208
           G  + G      LF+   +H
Sbjct: 613 GDMELGAHAADQLFKMTPQH 632


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/624 (37%), Positives = 362/624 (58%), Gaps = 9/624 (1%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M  RN VSWT L+ G  QN      L+ F  M  + V P  F LS+  +A+  L +   G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+H + ++ GF+    V +++ DMYSKCG ++EA R+FD MP K  + W AMI GY   
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 193 GYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           G  +  +L FR M+  G +  D+  F S L A G L        IH  +  +GF   V  
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEV-- 178

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRE 310
            +  +L+D Y K   +  A RV  +     +V+S +S+I GY + + + EA+ ++ +LR 
Sbjct: 179 AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           + ++ + F  SSM+   A  AL+EQG Q+HA   K     D+ V +++VDMY KCGLI  
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 298

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + +LFNE+  +  + W  +I  + +HG  +EA+  F +M+   + P+ +A++++L+ACSH
Sbjct: 299 SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSH 358

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLV+E  +YF  +     ++P+ EHYSCI+D+ GRAGRLDEA   I  MP+KP+   W 
Sbjct: 359 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 418

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL ACR+ G  ELG    + L++L+  N   +V +S I+A  G W + + +RKL R   
Sbjct: 419 SLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSR 478

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK+ G SWV+ +K+ H F   D +HP  + I++ L E+  R+KEE G++    +   ++
Sbjct: 479 IKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEE-GYIPDTSFLPCNL 537

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           ++ +KE  LR HSE++A+  AL+    +    K I V KNLR+C DCH   K + K+ + 
Sbjct: 538 EDIAKERILRYHSERIAVAFALI----SMPATKPIIVKKNLRICIDCHTAFKFICKVERR 593

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             +VRD +RFH F  G CSCGDYW
Sbjct: 594 DIIVRDNSRFHHFVNGRCSCGDYW 617



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 224/424 (52%), Gaps = 10/424 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH   V++GF  +L + ++L DMY+KCG ++ AC VFD+M +++ V+WTA++ G+ +NG
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 93  NAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           + +A +  F  M     V  ++    + + ASG L        IH    K+GFE    V 
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 181

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           N++IDMY+K   +  A+R+  + P   ++++  +MI GY+     ++ L+++ +++  G 
Sbjct: 182 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 241

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+EFTF+S +K C     +  G Q+H  +I +       + +  +LVD Y KCG +  +
Sbjct: 242 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRD--SFVGSTLVDMYGKCGLISLS 299

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            ++F+ IE ++ I+W+++I  +AQ  +  EA++ F ++    ++ +     S++   +  
Sbjct: 300 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 359

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
            LV++G + + Y+ K   G++    +   I+D Y + G +DEA +  +EMP+K N   W 
Sbjct: 360 GLVDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 418

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++      G +KE +G      L  +EP        LS    S    E  +   +L  D
Sbjct: 419 SLLGACRMRG-SKE-LGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 476

Query: 448 KRMK 451
            R+K
Sbjct: 477 SRIK 480



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 2/182 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+   LL+ G QLH  ++K     D  + + L+DMY KCG ++ +  +F+++  R  
Sbjct: 252 IKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD 311

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHG 137
           ++W A++  F Q+G+ +  +  F +M  S ++PN     + + A      V+ G++  + 
Sbjct: 312 IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYS 371

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSD 196
           M    G E      + IID Y + GR++EA +    MP K +   W +++    + G  +
Sbjct: 372 MKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 431

Query: 197 KG 198
            G
Sbjct: 432 LG 433


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/593 (38%), Positives = 347/593 (58%), Gaps = 13/593 (2%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  S   PN FT    IK+   LS    G Q+H    K+G    P V  S+I MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 164 INEAARMFDVMPAKSLIT--WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           I+ A ++FD  P    +T  +N++++GY L       ++LF +M+E G   +  T    +
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           + CG  G++G G  +HGF +  G    + + +   L+  YVK G +   R++FD + +K 
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGL--DMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKG 178

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +I+W+++I GYAQ       +EL++++  +    D   L  ++   A    +  GK++  
Sbjct: 179 LITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
                    +  ++N++V+MY +CG + +A ++F+ MPVK+VV+WT II GYG HG  + 
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           AVGLF +M+   ++PDG A+++VLSACSH+GL  +  +YF  +     ++P  EHYSC+V
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGRAGRL+EA+ LIESM V+   A+W  LL AC++H ++EL     E ++ L+  N  
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            YV++SN++ +AG+     R+R L R + LKK  G S+VE    +H F+ GD  HP T +
Sbjct: 419 YYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNE 478

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I++ L E+E  +K+    + G K   H+ +EE    S+ VHSEKLA+  AL    LN + 
Sbjct: 479 IYKKLNELENLVKD----LDGCKKNDHERREEYL-NSMGVHSEKLAVAFAL----LNTRK 529

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              I + KNLR+CGDCH FIK +SKI+   FVVRDATRFH F+ G CSC +YW
Sbjct: 530 ETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 207/414 (50%), Gaps = 10/414 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +++ C+   L   G QLH  + K G   +  +   LI MY KC  ++ A  +FD+  +  
Sbjct: 16  AIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSR 75

Query: 78  --VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
              V + +L+ G+  N   K  + LFC+M    V+ N  T+   ++  G+  ++  GM +
Sbjct: 76  KLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCV 135

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG C+K G + +  VGN ++ MY K G I+   ++FD MP K LITWNAMI GY   G +
Sbjct: 136 HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLA 195

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +  L L+++M+  G  PD  T    L +C  LG++  G ++   +   GF +S    +  
Sbjct: 196 NNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM--EGFGFSSNPFLNN 253

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LV+ Y +CG L +AR +FD +  KSV+SW+++I GY        A+ LF ++    ++ 
Sbjct: 254 ALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKP 313

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           DG    S++   +   L  +G        +   GL     +   +VD+  + G ++EA E
Sbjct: 314 DGTAFVSVLSACSHAGLTNKGLDYFGVMER-KYGLRPGAEHYSCMVDLLGRAGRLNEARE 372

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L   M V+ +   W  ++     H   + A   F +++  ++EP    Y  +LS
Sbjct: 373 LIESMQVRADGALWGALLGACKIHRNVELAELAFEQVI--ELEPTNTGYYVLLS 424



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 2/175 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L  G ++   +   GFS +  LNN L++MYA+CG +  A  +FD M 
Sbjct: 217 LVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMP 276

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VVSWTA++ G+  +G  +  + LF +M    +KP+     + + A         G+ 
Sbjct: 277 VKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLD 336

Query: 135 IHG-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL-ITWNAMIA 187
             G M  K G        + ++D+  + GR+NEA  + + M  ++    W A++ 
Sbjct: 337 YFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLG 391


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/671 (34%), Positives = 379/671 (56%), Gaps = 24/671 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  + + G    L+++  L   YA+ G +  A  VFD+  ER+VVSW A++  + Q+G+
Sbjct: 247 IHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGH 306

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                 LF +M    + P++ TL   + AS   SS+  G  IHG  ++ G + + V+GN+
Sbjct: 307 MSEAALLFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNA 363

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY++CG   EA  +F  +P  + ++WN MIAG    G   + + LF++MQ  G  P 
Sbjct: 364 LLDMYTRCGSPEEARHLFKRIPCNA-VSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPV 422

Query: 214 EFTFTSTLKACGS----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             T+ + L+A  S      ++  G ++H  +++ G  Y+ +  I  ++V  Y  CG + E
Sbjct: 423 RATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG--YASEPAIGTAVVKMYASCGAIDE 480

Query: 270 ARRVFD---LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           A   F    + ++  V+SW+++I   +Q  +   A+  FR++    +  +     +++  
Sbjct: 481 AAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDA 540

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPV-KNV 383
            A  A + +G+ +H +     SG++++  V+ ++  MY +CG ++ A E+F ++ V ++V
Sbjct: 541 CAGAAALTEGEIVHDHLRH--SGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDV 598

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V +  +I  Y ++GLA EA+ LF +M  +   PD  ++++VLSACSH GL +E  E F  
Sbjct: 599 VIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRS 658

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +     + P  +HY+C VD LGRAG L +A+ LI  M VKP++ +W+TLL ACR + D++
Sbjct: 659 MRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVD 718

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
            GR    ++  LD  +   YV++SNI A AG W+E   +R    S+GL+K AG+SW+E+ 
Sbjct: 719 RGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIK 778

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
             +H F  GD +HP +E+I++ L  +   ++ E+G+V   +  L  + E  KE  L  HS
Sbjct: 779 SRVHEFVAGDRSHPRSEEIYRELERLHAEIR-EIGYVPDTRLVLRKVDEAEKERLLCQHS 837

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           E+LAI L     G+       +RV KNLRVC DCH   K +SKI+    VVRD  RFH F
Sbjct: 838 ERLAIAL-----GVMSSSTDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHF 892

Query: 684 EGGVCSCGDYW 694
             G CSCGDYW
Sbjct: 893 VDGSCSCGDYW 903



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 252/551 (45%), Gaps = 40/551 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR    + LL  G ++H  +V +G   +L   N L+ +Y KC  +     VF ++  R+ 
Sbjct: 36  LRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDE 93

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SWT ++  + ++G AK  + +F +M    V+ +  T    +KA   L  +  G  IH  
Sbjct: 94  ASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAW 153

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            ++SG +   V+ N ++ +Y  CG +  A  +F+ M  + L++WNA IA    +G     
Sbjct: 154 IVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIA 212

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF++MQ  G  P   T    L  C ++        IH  +  SG   ++  V++ +L 
Sbjct: 213 LELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTL--VVSTALA 267

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y + G L +A+ VFD   ++ V+SW++++  YAQ  +++EA  LF ++    +     
Sbjct: 268 SAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV 327

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            L   +      + +  G+ IH  A +     D  + N+++DMY +CG  +EA  LF  +
Sbjct: 328 TL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P  N V+W  +I G  + G  K AV LF++M L+ + P    YL +L A      V  + 
Sbjct: 385 PC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA------VASNP 437

Query: 439 EYFSRLCNDKRMKPRIEHYSC-----------IVDSLGRAGRLDEAKNLIE--SMPVKPS 485
           E    +   +++  RI   SC           +V      G +DEA    +  +M  +  
Sbjct: 438 EEARAMAEGRKLHSRI--VSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLD----GDNPVNYVMMSNIHADAGSWNECER 541
           +  W  ++S+   HG    G+       R+D      N +  V + +  A A +  E E 
Sbjct: 496 VVSWNAIISSLSQHGH---GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI 552

Query: 542 LRKLARSKGLK 552
           +    R  G++
Sbjct: 553 VHDHLRHSGME 563



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           L  ++    D  L+ QG++IHA    V  GL+  + N ++ +YLKC  + +  E+F+ + 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARI--VSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           V++  +WT IIT Y +HG AK A+G+F +M  + V  D V +LAVL AC+  G + + + 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             + +  +  +K +    + ++   G  G +  A  L E M  +  +  W   ++A    
Sbjct: 150 IHAWIV-ESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAANAQS 206

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMM 526
           GDL +  E+ +  ++L+G  P    ++
Sbjct: 207 GDLGIALELFQ-RMQLEGVRPARITLV 232



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 5/172 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L  C+    L  G  +H  L   G   +L +   L  MY +CG +  A  +F+K+ +ER+
Sbjct: 538 LDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERD 597

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VV + A++  + QNG A   L LF +M     +P+E +  + + A       + G +I  
Sbjct: 598 VVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIF- 656

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMI 186
             M+  +   P   +    +D+  + G + +A  +   M  K +++ W  ++
Sbjct: 657 RSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLL 708


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 378/673 (56%), Gaps = 37/673 (5%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  G ++HG ++  G   F + + N L++MYAKCG +  A  VF  M E++ VSW +++ 
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMIT 388

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G  QN      +  +  M    + P  FTL ++I +   L   + G QIHG  +K G + 
Sbjct: 389 GLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDL 448

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKM 205
           N  V N+++ +Y++ G +NE  ++F  MP    ++WN++I     +  S  + +  F   
Sbjct: 449 NVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNA 508

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
              G+  +  TF+S L A  SL     G QIHG  +   +  + +     +L+  Y KCG
Sbjct: 509 LRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK--YNIADEATTENALIACYGKCG 566

Query: 266 CLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            +    ++F  + E++  ++W+S+I GY   E LA+A++L   + +   ++D F+ ++++
Sbjct: 567 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVL 626

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             FA  A +E+G ++HA + +     D  V +++VDMY KCG +D A   FN MP     
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP----- 681

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
                               LF  M LD    PD V ++ VLSACSH+GL+EE  ++F  
Sbjct: 682 --------------------LFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 721

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-D 501
           + +   + PRIEH+SC+ D LGRAG LD+ ++ IE MP+KP++ IW+T+L A CR +G  
Sbjct: 722 MSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 781

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
            ELG++  E+L +L+ +N VNYV++ N++A  G W +  + RK  +   +KK AG SWV 
Sbjct: 782 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 841

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           +   +H F  GD +HP  + I++ L E+ ++M++  G+V    +AL+D+++E+KEE L  
Sbjct: 842 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDA-GYVPQTGFALYDLEQENKEEILSY 900

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSEKLA+   L     +  P   IR+ KNLRVCGDCH   K +SKI     ++RD+ RFH
Sbjct: 901 HSEKLAVAFVLAAQRSSTLP---IRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFH 957

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSC D+W
Sbjct: 958 HFQDGECSCSDFW 970



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 243/505 (48%), Gaps = 13/505 (2%)

Query: 8   LVSERQRLADSLRCCSK--NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG-EMN 64
           + S       +LR C +  ++ + +G Q+HG L K+ ++ D +++N LI MY KCG  + 
Sbjct: 98  VFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLG 157

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A   FD +  +N VSW +++  + Q G+ +    +F  M     +P E+T  + +  + 
Sbjct: 158 YALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTAC 217

Query: 125 VLSSVENGMQIHGMC--MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
            L+  +  +    MC   KSGF  +  VG+ ++  ++K G +  A ++F+ M  ++ +T 
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTL 277

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGG---GTQIHG 238
           N ++ G V   + ++   LF  M    ++ P+ +    +     SL    G   G ++HG
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
            +IT+G        I   LV+ Y KCG + +ARRVF  + +K  +SW+S+I G  Q    
Sbjct: 338 HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCF 396

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+E ++ +R   +    F L S +   A     + G+QIH  + K+   L+ SVSN++
Sbjct: 397 IEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA-KEAVGLFRKMLLDDVEPD 417
           + +Y + G ++E  ++F+ MP  + V+W  II        +  EAV  F   L    + +
Sbjct: 457 MTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLN 516

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + + +VLSA S     E  ++    L     +       + ++   G+ G +D  + + 
Sbjct: 517 RITFSSVLSAVSSLSFGELGKQIHG-LALKYNIADEATTENALIACYGKCGEMDGCEKIF 575

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDL 502
             M  +     W +++S   +H +L
Sbjct: 576 SRMSERRDDVTWNSMISG-YIHNEL 599



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 236/480 (49%), Gaps = 30/480 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            H  L K G   D+ L N+LI+ Y + G+   A  VFD+M  RN VSW  ++ G+ +NG 
Sbjct: 23  FHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGE 82

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQIHGMCMKSGFEWNPVVG 151
            K  L     M    V  N +   + ++A   L SV    G QIHG+  K  +  + VV 
Sbjct: 83  HKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVS 142

Query: 152 NSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           N +I MY KC G +  A R FD +  K+ ++WN++I+ Y   G       +F  MQ  G 
Sbjct: 143 NVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGS 202

Query: 211 IPDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            P E+TF S +    SL    V    QI   +  SGF   +   +   LV  + K G L+
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDL--FVGSGLVSAFAKSGSLI 260

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMMGVF 327
            AR++F+ +E ++ ++ + L++G  +++   EA +LF  +     +  + +V+  ++  F
Sbjct: 261 HARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSF 318

Query: 328 ADFALVEQ-----GKQIHAYAAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +++L E+     G+++H +   + +GL      + N +V+MY KCG I +A  +F  M 
Sbjct: 319 PEYSLAEEVGLKKGREVHGHV--ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMT 376

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            K+ V+W  +ITG  ++    EAV  ++ M   ++ P     ++ +S+C+     +  Q+
Sbjct: 377 EKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQ 436

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
                 + + +K  I+    + ++L       G L+E + +  SMP    ++ W +++ A
Sbjct: 437 I-----HGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVS-WNSIIGA 490



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  + N++++ YL+ G    A ++F+EMP++N V+W  +++GY ++G  KEA+   R M+
Sbjct: 35  DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMV 94

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR---- 466
            + V  +  A+++ L AC     ++     F R  +    K      + + + L      
Sbjct: 95  KEGVFSNHYAFVSALRACQE---LDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWK 151

Query: 467 -AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
             G L  A    + + VK S++ W +++S     GD     ++    ++ DG  P  Y  
Sbjct: 152 CGGSLGYALRAFDDVQVKNSVS-WNSIISVYSQTGDQRFAFKMF-YSMQCDGSRPTEYTF 209

Query: 526 MS 527
            S
Sbjct: 210 GS 211


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 364/669 (54%), Gaps = 55/669 (8%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCG-----EMNGACAVFDKMLERNVVSWTALMCG 87
           Q H  +++ G   D  +   L+  YA            +  VFD + + NV  W  ++  
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            ++N      + L+ +M  +  +PN++T    +KA      V  G+Q+H   +K G   +
Sbjct: 112 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 171

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             + +S I MY+  GR+ EA R+ D    +   + WNAMI GY+  G  +    LF  M 
Sbjct: 172 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM- 230

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
                PD  +  ST  A                 + SGF                 +CG 
Sbjct: 231 -----PDR-SMISTWNA-----------------MISGFS----------------RCGM 251

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR  FD ++++  ISWS++I GY QE    EA+E+F Q+++  ++   FVL S++  
Sbjct: 252 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSA 311

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A+   ++QG+ IH YA +    LD  +  S+VDMY KCG ID A E+F +M  K V +W
Sbjct: 312 CANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW 371

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I G   HG A++A+ LF KM   D+ P+ + ++ VL+AC+H GLV++    F+ +  
Sbjct: 372 NAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 428

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           +  ++P+IEHY CIVD LGRAG L EA+ ++ S+P +P+ A+W  LL ACR HG++ELG 
Sbjct: 429 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGE 488

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK-E 565
            VG+ILL L+  N   Y ++SNI+A AG W E   +RKL + +G+K   G S +++ + E
Sbjct: 489 RVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGE 548

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD +HP  + I+Q+L ++++R++ E G+       L DI EE KE ++  HSEK
Sbjct: 549 VHKFIIGDGSHPQVKDIYQMLDKVKERLQME-GYEPDPSQVLFDIDEEEKETAVWQHSEK 607

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAIG  L+    N  PG  IR+ KNLRVC DCH   K +S++     +VRD  R+H F  
Sbjct: 608 LAIGFGLI----NTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRN 663

Query: 686 GVCSCGDYW 694
           G CSC D+W
Sbjct: 664 GACSCKDFW 672



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 178/411 (43%), Gaps = 78/411 (18%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF---------------SF-----------------D 46
           L+ CS   ++  GVQ+H  LVK G                SF                 D
Sbjct: 144 LKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 203

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNV---------------------------- 78
            +  N +ID Y + GE+  A  +F+ M +R++                            
Sbjct: 204 AVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMK 263

Query: 79  ----VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
               +SW+A++ G++Q G     L +F QM    ++P +F L + + A   L +++ G  
Sbjct: 264 ERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRW 323

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH    ++  + + V+G S++DMY+KCGRI+ A  +F+ M  K + +WNAMI G  + G 
Sbjct: 324 IHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGR 383

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  + LF KM  +   P+E TF   L AC   G V  G  I   +      Y V+  I 
Sbjct: 384 AEDAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKE---YGVEPQIE 437

Query: 255 --GSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRER 311
             G +VD   + G L EA +V   I  +   + W +L+    +  N+     + + L E 
Sbjct: 438 HYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 497

Query: 312 SLQVDG-FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             Q  G + L S   ++A     E+  ++     +   G+ T+   SI+D+
Sbjct: 498 EPQNSGRYTLLS--NIYAKAGRWEEVGEVRKLMKE--RGIKTTPGTSIIDL 544



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G  +H    +     D +L   L+DMYAKCG ++ A  VF+KM 
Sbjct: 305 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 364

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            + V SW A++ G   +G A+  + LF +M    + PNE T    + A      V+ G+ 
Sbjct: 365 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLT 421

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           I    M+  +   P + +   I+D+  + G + EA ++   +P + +   W A++  
Sbjct: 422 IFN-SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/694 (33%), Positives = 377/694 (54%), Gaps = 45/694 (6%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           L K+  S    L    I +Y+  G++  A  +FDK+ + ++ +WT L+    ++G +   
Sbjct: 2   LSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEA 61

Query: 98  LSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIID 156
           +  +      + V+P++  L +  KA   L  V N  ++H   ++ GF  + ++GN++ID
Sbjct: 62  IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121

Query: 157 MYSKCGRINEAARM-FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           MY KC R +E AR+ F+ MP + +I+W +M + YV  G   + L  FRKM  +GE P+  
Sbjct: 122 MYGKC-RCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T +S L AC  L  +  G ++HGF++ +G   +V   ++ +LV+ Y  C  + +A+ VFD
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNV--FVSSALVNMYASCLSIRQAQLVFD 238

Query: 276 LIEQKSVISWSSLILGY-----------------------------------AQEENLAE 300
            + ++  +SW+ LI  Y                                    Q     +
Sbjct: 239 SMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEK 298

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+E+  +++    + +   ++S++    +   +  GKQIH Y  +     D + + ++V 
Sbjct: 299 ALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVF 358

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG ++ +  +F+ M  ++ V+W  +I     HG  +EA+ LFR+M+   V P+ V 
Sbjct: 359 MYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVT 418

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +  VLS CSHS LV+E    F  +  D  ++P  +H+SC+VD L RAGRL+EA   I+ M
Sbjct: 419 FTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKM 478

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P++P+   W  LL  CRV+ ++ELGR     L  ++ DNP NYV++SNI   A  W+E  
Sbjct: 479 PIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEAS 538

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
             RKL R +G+ K  G SW++V   +H F  GD ++  +++I++ L  M ++M+   G++
Sbjct: 539 ETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIA-GYL 597

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
               + L D+ +E KEE L  HSEKLA+      G LN      IRVFKNLR+CGDCH  
Sbjct: 598 PNTDFVLQDVDQEEKEEVLCNHSEKLAVAF----GVLNLNGESSIRVFKNLRICGDCHNA 653

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IK ++KI+ +  +VRD+ RFH F  G+CSC D+W
Sbjct: 654 IKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 201/397 (50%), Gaps = 39/397 (9%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   ++ GF  D++L N LIDMY KC    GA  VF+ M  R+V+SWT++   ++  G
Sbjct: 99  RVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCG 158

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  L  F +MG +  +PN  T+S+ + A   L  +++G ++HG  +++G   N  V +
Sbjct: 159 LLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSS 218

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF---------- 202
           ++++MY+ C  I +A  +FD M  +  ++WN +I  Y L    +KGL +F          
Sbjct: 219 ALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGL 278

Query: 203 -------------------------RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
                                     +MQ  G  P++ T TS L AC +L S+ GG QIH
Sbjct: 279 NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIH 338

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G++    F   + T  A  LV  Y KCG L  +RRVF ++ ++  +SW+++I+  +   N
Sbjct: 339 GYIFRHWFFQDLTTTTA--LVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGN 396

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSN 356
             EA+ LFR++ +  ++ +    + ++   +   LV++G  I    ++  S   D    +
Sbjct: 397 GEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHS 456

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITG 392
            +VD+  + G ++EA E   +MP++     W  ++ G
Sbjct: 457 CMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G ++HG +V+ G   ++ +++ L++MYA C  +  A  VFD M  R+ 
Sbjct: 186 LPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDT 245

Query: 79  VSWTALMCGF-----------------------------------LQNGNAKACLSLFCQ 103
           VSW  L+  +                                   +QNG  +  L +  +
Sbjct: 246 VSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSR 305

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M +S  KPN+ T+++ + A   L S+  G QIHG   +  F  +     +++ MY+KCG 
Sbjct: 306 MQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGD 365

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +  + R+F +M  +  ++WN MI    + G  ++ LLLFR+M + G  P+  TFT  L  
Sbjct: 366 LELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSG 425

Query: 224 C 224
           C
Sbjct: 426 C 426



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G Q+HG + +  F  DL     L+ MYAKCG++  +  VF  M +R+ 
Sbjct: 322 LPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDT 381

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           VSW  ++     +GN +  L LF +M  S V+PN  T +  +        V+ G+ I   
Sbjct: 382 VSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDS 441

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI-TWNAMIAG 188
           M      E +    + ++D+ S+ GR+ EA      MP +     W A++ G
Sbjct: 442 MSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/569 (36%), Positives = 330/569 (57%), Gaps = 9/569 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++ +G ++H   +K+ +     +   ++  Y KC  + +A ++ D MP K++++W AMI+
Sbjct: 67  ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            Y   G+S + L +F +M      P+EFTF + L +C     +G G QIHG ++   + Y
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK--WNY 184

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SL+D Y K G + EAR +F+ + ++ V+S +++I GYAQ     EA+E+F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L    +  +    +S++   +  AL++ GKQ H +  +        + NS++DMY KCG 
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLS 426
           +  A  LF+ MP +  ++W  ++ GY KHGL +E + LFR M  +  V+PD V  LAVLS
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364

Query: 427 ACSHSGLVEESQEYFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            CSH  + +     F  +   +   KP  EHY CIVD LGRAGR+DEA   I+ MP KP+
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             +  +LL ACRVH  +++G  VG  L+ ++ +N  NYV++SN++A AG W +   +R +
Sbjct: 425 AGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAM 484

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              K + K  GRSW++ ++ +H+F+  D THP  E++   + E+  +MK+  G+V  +  
Sbjct: 485 MMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA-GYVPDLSC 543

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            L+D+ EE KE+ L  HSEKLA+   L+  G     G  IRVFKNLR+C DCH F K  S
Sbjct: 544 VLYDVDEEQKEKMLLGHSEKLALTFGLIATG----EGIPIRVFKNLRICVDCHNFAKIFS 599

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K+ +    +RD  RFH+   G+CSCGDYW
Sbjct: 600 KVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 220/412 (53%), Gaps = 13/412 (3%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C  K  L D G ++H  ++K  +     L   L+  Y KC  +  A  V D+M E+NVVS
Sbjct: 62  CLDKRALRD-GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVS 120

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WTA++  + Q G++   L++F +M  S  KPNEFT +T + +    S +  G QIHG+ +
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K  ++ +  VG+S++DMY+K G+I EA  +F+ +P + +++  A+IAGY   G  ++ L 
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           +F ++   G  P+  T+ S L A   L  +  G Q H  ++    P+    V+  SL+D 
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY--AVLQNSLIDM 298

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFV 319
           Y KCG L  ARR+FD + +++ ISW+++++GY++     E +ELFR +R E+ ++ D   
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358

Query: 320 LSSMMGVFADFALVEQGKQIH--AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           L +++   +   + + G  I     A +  +   T     IVDM  + G IDEA E    
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418

Query: 378 MPVKNVVTWTVIITGYGKHGLA---KEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           MP K        + G  +  L+    E+VG  R+++  ++EP+      +LS
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVG--RRLI--EIEPENAGNYVILS 466



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 4/266 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C +   L  G Q+HG +VK  +   + + + L+DMYAK G++  A  +F+ + 
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L +F ++ S  + PN  T ++ + A   L+ +++G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            H   ++    +  V+ NS+IDMYSKCG ++ A R+FD MP ++ I+WNAM+ GY   G 
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + L LFR M++   + PD  T  + L  C        G  I   ++   +     T  
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQ 279
            G +VD   + G + EA   F+ I++
Sbjct: 396 YGCIVDMLGRAGRIDEA---FEFIKR 418



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           +++    D   +  G+++HA+  K      T +   ++  Y KC  +++A ++ +EMP K
Sbjct: 57  ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC---SHSGLVEESQ 438
           NVV+WT +I+ Y + G + EA+ +F +M+  D +P+   +  VL++C   S  GL ++  
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
               +   D      I   S ++D   +AG++ EA+ + E +P +  ++    +      
Sbjct: 177 GLIVKWNYDS----HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG---- 228

Query: 499 HGDLELGREVGEILLRL--DGDNPVNYVMMSNIHA--------DAGSWNECERLRK 544
           +  L L  E  E+  RL  +G +P NYV  +++          D G    C  LR+
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSP-NYVTYASLLTALSGLALLDHGKQAHCHVLRR 283


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/624 (35%), Positives = 344/624 (55%), Gaps = 39/624 (6%)

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           Q+   + KP   T    I+      ++E G ++H     SGF    V+ N I+ MY+KCG
Sbjct: 77  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI----------- 211
            + +A ++FD MP + + +WN M+ GY   G  ++   LF +M E               
Sbjct: 137 SLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVK 196

Query: 212 ---------------------PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                                P+ FT +S + A  ++  +  G +IHG ++ +G      
Sbjct: 197 KDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGL--DSD 254

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            V+  SL+D Y KCGC+ EAR +FD I  K V+SW+S+I  Y +     E   LF +L  
Sbjct: 255 EVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIG 314

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
              + + +  S ++   AD    E G+Q+H Y  +V     +  S+S++DMY KCG I+ 
Sbjct: 315 SCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIES 374

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  + +  P  ++V+ T +I GY ++G   EA+  F  +L    +PD V ++ VLSAC+H
Sbjct: 375 ARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 434

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVE+  E+F  +     +    +HY+C+VD L R+GR ++ K+++  MP+KPS  +W 
Sbjct: 435 AGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWA 494

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           ++L  C  +G+++L  E  + L +++ +NPV YV M+NI+A AG W E  ++RK  +  G
Sbjct: 495 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 554

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           + K  G SW E+ ++ H F   D +HP+  +I + L E+ K+MKEE G+V      LHD+
Sbjct: 555 ITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEE-GYVPATSLVLHDV 613

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           ++E KEE+L  HSEKLA+  A+    L+ + G  I+VFKNLR C DCH  IK +SKI K 
Sbjct: 614 EDEQKEENLVYHSEKLAVAFAI----LSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKR 669

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
              +RD+TRFH FE G CSC DYW
Sbjct: 670 KITIRDSTRFHCFENGQCSCRDYW 693



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 49/466 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ CS+   L+ G ++H  +   GF   +++ N ++ MYAKCG +  A  VFD+M ER+V
Sbjct: 94  IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDV 153

Query: 79  -------------------------------VSWTALMCGFLQNGNAKACLSLFCQMGS- 106
                                           SWTA++ G+++    +  L L+  M   
Sbjct: 154 CSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 213

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            + KPN FT+S+ + A+  +  +  G +IHG  +++G + + V+ +S++DMY KCG I+E
Sbjct: 214 PNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 273

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD +  K +++W +MI  Y  +    +G  LF ++    E P+E+TF+  L AC  
Sbjct: 274 ARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACAD 333

Query: 227 LGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           L +   G Q+HG++   GF PYS  +    SL+D Y KCG +  AR V D   +  ++S 
Sbjct: 334 LTTEELGRQVHGYMTRVGFDPYSFAS---SSLIDMYTKCGNIESARHVVDGCPKPDLVSL 390

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +SLI GYAQ     EA++ F  L +   + D     +++       LVE+G +      +
Sbjct: 391 TSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITE 450

Query: 346 VPSGLDTSVSNS-IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAK 400
                 TS   + +VD+  + G  ++   + +EMP+K +   W  ++ G   YG   LA+
Sbjct: 451 KHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAE 510

Query: 401 EAVG-LFRKMLLDDVEPDG-VAYLAVLSACSHSGLVEESQEYFSRL 444
           EA   LF+      +EP+  V Y+ + +  + +G  EE  +   R+
Sbjct: 511 EAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 550


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/570 (37%), Positives = 335/570 (58%), Gaps = 11/570 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G ++H   +K+ +     +   ++  Y KC  + +A ++ D MP K++++W AMI+
Sbjct: 66  ALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 125

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            Y   G+S + L +F +M      P+EFTF + L +C     +  G QIHG ++   + Y
Sbjct: 126 RYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVK--WNY 183

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SL+D Y K G + EAR +F+ + ++ V+S +++I GYAQ     EA+E+F++
Sbjct: 184 DSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQR 243

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+   ++ +    +S++   +  AL++ GKQ H +  +        + NS++DMY KCG 
Sbjct: 244 LQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 303

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLS 426
           +  A  LF+ MP +  ++W  ++ GY KHGL +E + LFR M  +  V+PD V  LAVLS
Sbjct: 304 LSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 363

Query: 427 ACSHSGLVEES--QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            CSH G +E++    Y   +  +  +KP  EHY CIVD LGRAGR+DEA   I+ MP KP
Sbjct: 364 GCSH-GKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 422

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           +  +  +LL ACRVH  +++G  VG  L+ ++ +N  NYV++SN++A AG W +   +R 
Sbjct: 423 TAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRA 482

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           +   K + K  GRSW++ ++ +H+F+  D THP  E++   + E+  +MK+  G+V  + 
Sbjct: 483 MMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA-GYVPDIS 541

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             L+D+ EE KE+ L  HSEKLA+   L+  G     G  IRVFKNLR+C DCH F K  
Sbjct: 542 CVLYDVDEEQKEKMLLGHSEKLALTFGLITTG----EGIPIRVFKNLRICVDCHNFAKIF 597

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK+ +    +RD  RFH+   G+CSCGDYW
Sbjct: 598 SKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 219/411 (53%), Gaps = 6/411 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L  G ++H  ++K  +     L   L+  Y KC  +  A  V D+M E+NV
Sbjct: 58  LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++  + Q G++   LS+F +M  S  KPNEFT +T + +    S +  G QIHG+
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K  ++ +  VG+S++DMY+K G+I EA  +F+ +P + +++  A+IAGY   G  ++ 
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 237

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F+++Q  G  P+  T+ S L A   L  +  G Q H  ++    P+    V+  SL+
Sbjct: 238 LEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY--AVLQNSLI 295

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDG 317
           D Y KCG L  A+R+FD + +++ ISW+++++GY++     E +ELFR +R E+ ++ D 
Sbjct: 296 DMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 355

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELF 375
             L +++   +   + + G  I+        G+  DT     IVDM  + G IDEA E  
Sbjct: 356 VTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFI 415

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             MP K        + G  +  L+ + +G +    L ++EP+      +LS
Sbjct: 416 KRMPSKPTAGVLGSLLGACRVHLSVD-IGEYVGHRLIEIEPENAGNYVILS 465



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 143/266 (53%), Gaps = 4/266 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C +   L  G Q+HG +VK  +   + + + L+DMYAK G++  A  +F+ + 
Sbjct: 155 FATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L +F ++ S  ++PN  T ++ + A   L+ +++G Q
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            H   ++    +  V+ NS+IDMYSKCG ++ A R+FD MP ++ I+WNAM+ GY   G 
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + L LFR M++   + PD  T  + L  C        G  I+  ++   +     T  
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEH 394

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQ 279
            G +VD   + G + EA   F+ I++
Sbjct: 395 YGCIVDMLGRAGRIDEA---FEFIKR 417



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 18/234 (7%)

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           +++    D   + +G+++HA+  K      T +   ++  Y KC  +++A ++ +EMP K
Sbjct: 56  ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 115

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEY 440
           NVV+WT +I+ Y + G + EA+ +F +M+  D +P+   +  VL++C   SGL    Q  
Sbjct: 116 NVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ-- 173

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              L         I   S ++D   +AG+++EA+ + E +P +  ++    +      + 
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAG----YA 229

Query: 501 DLELGREVGEILLRL--DGDNPVNYVMMSNIHA--------DAGSWNECERLRK 544
            L L  E  E+  RL  +G  P NYV  +++          D G    C  LR+
Sbjct: 230 QLGLDEEALEMFQRLQSEGMRP-NYVTYASLLTALSGLALLDHGKQAHCHVLRR 282


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/705 (34%), Positives = 381/705 (54%), Gaps = 32/705 (4%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKM--GFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           Q  A     C++   +  G+ LH  ++        D+ L N+L++MY KCG ++ A  +F
Sbjct: 79  QDYAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLF 138

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M  RN VSWT L+ G+ Q G  + C +LF  M  +  +PNEF  ++ + A      V+
Sbjct: 139 DQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACEE-QDVK 196

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG---------RINEAARMFDVMPAKSLIT 181
            G+Q+H   +K   +++  V N++I MYSKC            ++A  +F  M  ++LI+
Sbjct: 197 YGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLIS 256

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT---STLKACGSLGSVGGGT---- 234
           WN+MI+G+   G  DK + LF  M  +G   +  T     S+L  C S       T    
Sbjct: 257 WNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLK 316

Query: 235 ---QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA--RRVFDLIEQKSVISWSSLI 289
              Q+H   + SG    V+ V A  LV  Y   G  +    +   D   +  ++SW+++I
Sbjct: 317 NCFQLHCLTVKSGLISEVEVVTA--LVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAII 374

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
             +A E +  +A  LF QL   +  +D    S  +   A F   +   ++H+   K    
Sbjct: 375 SVFA-ERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFH 433

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            DT VSN+++  Y + G +  + ++F EM   ++V+W  ++  Y  HG AK+A+ LF++M
Sbjct: 434 NDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM 493

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
              DV PD   ++A+L+ACSH+GLVEE  + F+ +     + P ++HYSC+VD  GRAG+
Sbjct: 494 ---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGK 550

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           + EA+ LI  MP+KP   IW +LL +CR HG+ +L +   +    LD  N + Y+ MSNI
Sbjct: 551 IFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNI 610

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           ++  GS+ E   +RK  R   ++K  G SWVEV K++H F  G   HP  + I   L  +
Sbjct: 611 YSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETL 670

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFK 649
             ++K E+G+   +  ALHDI+ E  E+ L  HSEK+A+  A++  G++   G VI++ K
Sbjct: 671 IGQLK-EMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMK 729

Query: 650 NLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           N+R+C DCH F+K  SK+ +   VVRD+ RFH F+   CSC DYW
Sbjct: 730 NIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 5/192 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           + V +R   + +L+ C+  +      ++H  ++K GF  D +++N LI  Y + G +  +
Sbjct: 396 NFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALS 455

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VF +M   ++VSW +++  +  +G AK  L LF QM    V P+  T    + A    
Sbjct: 456 EQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHA 512

Query: 127 SSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNA 184
             VE G QI + M    G   +    + ++D+Y + G+I EA  +   MP K   + W++
Sbjct: 513 GLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSS 572

Query: 185 MIAGYVLAGYSD 196
           ++      G +D
Sbjct: 573 LLGSCRKHGEAD 584


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/675 (35%), Positives = 361/675 (53%), Gaps = 17/675 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C +   L +G  LH  + +MG  +  ++L N ++ MY +CG +  A  +FD+M + N VS
Sbjct: 91  CRELRSLSHGRLLHNRM-RMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVS 149

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            T ++  + + G     + LF +M  S  KP     +T +K+     +++ G QIH   +
Sbjct: 150 RTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVI 209

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           ++G   N  +   I++MY KCG +  A R+FD M  K  + W  ++ GY  AG +   L 
Sbjct: 210 RAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALK 269

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF  +   G   D F F+  LKAC SL  +  G QIH  +   G    V   +   LVDF
Sbjct: 270 LFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVS--VGTPLVDF 327

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFV 319
           Y+KC     A R F  I + + +SWS++I GY Q     EA++ F+ LR ++  V + F 
Sbjct: 328 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFT 387

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +S+    +  A    G Q+HA A K          ++++ MY KCG +D+A E+F  M 
Sbjct: 388 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD 447

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             ++V WT  I+G+  +G A EA+ LF KM+   ++P+ V ++AVL+ACSH+GLVE+ + 
Sbjct: 448 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 507

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           Y   +     + P I+HY C++D   R+G LDEA   +++MP +P    W+  LS C  H
Sbjct: 508 YLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH 567

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            +LELG+  GE L +LD ++   YV+  N++  AG W E   + KL   + LKK    SW
Sbjct: 568 KNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSW 627

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           ++   +IH F  GD  HP +++I++ L E +       GF+ G    +       + E L
Sbjct: 628 IQEKGKIHRFIVGDKHHPQSQEIYEKLKEFD-------GFMEG---DMFQCSMTERREQL 677

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSE+LAI   L+   +N      I+VFKNLR C DCHEF K +S +     V+RD+ R
Sbjct: 678 LDHSERLAIAFGLI--SVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRR 735

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ G CSC DYW
Sbjct: 736 FHHFKEGKCSCNDYW 750



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 12/309 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L +G Q+H  + K+G   ++ +   L+D Y KC     AC  F ++ E N 
Sbjct: 290 LKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 349

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW+A++ G+ Q    +  +  F  + S ++V  N FT ++  +A  VL+    G Q+H 
Sbjct: 350 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHA 409

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K     +    +++I MYSKCG +++A  +F+ M    ++ W A I+G+   G + +
Sbjct: 410 DAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASE 469

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            L LF KM   G  P+  TF + L AC   G V  G     +L T    Y+V   I    
Sbjct: 470 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH---YLDTMLRKYNVAPTIDHYD 526

Query: 256 SLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENL---AEAMELFRQLRER 311
            ++D Y + G L EA R   ++  +   +SW   + G    +NL     A E  RQL   
Sbjct: 527 CMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPE 586

Query: 312 SLQVDGFVL 320
                G+VL
Sbjct: 587 --DTAGYVL 593


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/662 (34%), Positives = 363/662 (54%), Gaps = 6/662 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QL+  ++       L+    +   Y + G ++ A   F+ +   N+ SW  ++    +N 
Sbjct: 33  QLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNK 92

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L LF +M       + F L   +KA   LS  +     H + +K   E +P V  
Sbjct: 93  CFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAP 152

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++++Y++ G + EA ++F+ +P K+ + W  MI G++          LF +M+  G   
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F     ++ACG++ +   G   HG  I   F  S    +  SLVD Y+KCG L  A +
Sbjct: 213 DPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDS-NFFLQTSLVDMYMKCGFLDFALK 271

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F+ I  + V+ WS++I G+A+     E++ +FRQ+   S+  +    +S++   +    
Sbjct: 272 LFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGS 331

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++QG+ +H Y  +    LD     S +DMY KCG I  A  +F ++P KNV +W+ +I G
Sbjct: 332 LKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMING 391

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +G HGL  EA+ LF +M   +  P+ V +++VLSACSHSG +EE   +F  +  D  + P
Sbjct: 392 FGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITP 451

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
             EHY+C+VD LGRAG++DEA + I +MP +P  + W  LL ACR+H   EL  EV + L
Sbjct: 452 VEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKL 511

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L L+ D    YVM+SNI+AD G W   ++ R     KG+ K+ G + +E++++++ F   
Sbjct: 512 LPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSE 571

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D       +I  +   +++RM+ ELG+V  +++ LHD+ +E K+E L  HSEKLAI    
Sbjct: 572 DRFAYKNTQIESLWNSLKERMR-ELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAI---- 626

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           V G LN   G  IR+ KN+RVCGDCH   K +S I +   ++RD  RFH  + GVCSCGD
Sbjct: 627 VFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGD 686

Query: 693 YW 694
           YW
Sbjct: 687 YW 688



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 12  RQRLADSLR-----------CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           RQ LADS+             CS    L  G  +HG +++ G   D+      IDMYAKC
Sbjct: 305 RQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKC 364

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VF ++ E+NV SW+ ++ GF  +G     L+LF +M S +  PN  T  + +
Sbjct: 365 GCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVL 424

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS 178
            A      +E G   H   M   +   PV  +   ++D+  + G+I+EA    + MP + 
Sbjct: 425 SACSHSGRIEEGWS-HFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEP 483

Query: 179 -LITWNAMIAG 188
               W A++  
Sbjct: 484 GASAWGALLGA 494


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 363/655 (55%), Gaps = 18/655 (2%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           N L+ MYA+ G +  A  +F        +VV+W  ++   +Q+G     +     M +  
Sbjct: 209 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 268

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEA 167
           V+P+  T ++ + A   L  ++ G ++H   +K      N  V ++++DMY+   ++ +A
Sbjct: 269 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 328

Query: 168 ARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKAC 224
            ++FD++P   K L  WNAMI GY  AG  ++ L LF +M+ E G +P E T  S L AC
Sbjct: 329 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 388

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               +  G   +HG+++  G   +    +  +L+D Y + G    ARR+F +++   V+S
Sbjct: 389 ARSEAFAGKEAVHGYVVKRGM--AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 446

Query: 285 WSSLILGYAQEENLAEAMELFR---QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           W++LI G   + ++A+A +L R   QL E  +  +   L +++   A  A   +GK+IH 
Sbjct: 447 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 506

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           YA +     D +V +++VDMY KCG +  +  +F+ +P +N +TW V+I  YG HGL  E
Sbjct: 507 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 566

Query: 402 AVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           A  LF +M    +  P+ V ++A L+ACSHSG+V+   + F  +  D  ++P  +  +C+
Sbjct: 567 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 626

Query: 461 VDSLGRAGRLDEAKNLIESMPV-KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           VD LGRAGRLDEA  ++ SM   +  ++ W T+L ACR+H ++ LG   GE LL L+ + 
Sbjct: 627 VDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 686

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
             +YV++ NI++ AG W     +R   R +G+ K  G SW+EVD  IH F  G+  HP +
Sbjct: 687 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 746

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           E++H  +  +   M    G+       LHD+ +  K   LR HSEKLAI   L+R     
Sbjct: 747 EEVHAHMEALWGEMVAR-GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA--- 802

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG  IRV KNLRVC DCHE  K LSK++    V+RD  RFH F  G CSCGDYW
Sbjct: 803 -PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +L  CS+  LLD G ++H  ++K    + +  + + L+DMYA   ++  A  VFD +
Sbjct: 276 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 335

Query: 74  LE--RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVE 130
            +  + +  W A++CG+ Q G  +  L LF +M   +   P E T+++ + A     +  
Sbjct: 336 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 395

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
               +HG  +K G   N  V N+++DMY++ G+ + A R+F ++    +++WN +I G V
Sbjct: 396 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 455

Query: 191 LAGYSDKGLLLFRKMQ---EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           + G+      L R+MQ   E G +P+  T  + L  C  L +   G +IHG+ +      
Sbjct: 456 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 515

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-R 306
            V   +  +LVD Y KCGCL  +R VFD + +++ I+W+ LI+ Y       EA  LF R
Sbjct: 516 DV--AVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 573

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLK 364
                  + +     + +   +   +V++G Q+  +A +   G++ +  +   +VD+  +
Sbjct: 574 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLF-HAMERDHGVEPTPDILACVVDILGR 632

Query: 365 CGLIDEATELFNEMPV--KNVVTWTVII 390
            G +DEA  +   M    + V  W+ ++
Sbjct: 633 AGRLDEAYAMVTSMETGEQQVSAWSTML 660



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 229/492 (46%), Gaps = 35/492 (7%)

Query: 34  LHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTAL---MC 86
           +H A ++ G        + N L+  YA+CG +  A  VF  + +   + VS+ +L   +C
Sbjct: 81  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 140

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIHGMCMKS 142
            F +  +A A L      G        FTL + ++A        ++V  G + H   +K+
Sbjct: 141 LFRRWDHALAALRAMLAGGHPL---TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 197

Query: 143 GF--EWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAK-SLITWNAMIAGYVLAGYSDKG 198
           G          N+++ MY++ G + +A R+F    P +  ++TWN M++  V +G  D+ 
Sbjct: 198 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 257

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +     M   G  PD  TF S L AC  L  +  G ++H ++I      +  + +A +LV
Sbjct: 258 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD-ELAANSFVASALV 316

Query: 259 DFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D Y     + +AR+VFD++    K +  W+++I GYAQ     EA+ LF ++   +    
Sbjct: 317 DMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA---- 372

Query: 317 GFVL--SSMMGVFADFALVE--QGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           GFV   ++M  V    A  E   GK+ +H Y  K     +  V N+++DMY + G  D A
Sbjct: 373 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 432

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDD--VEPDGVAYLAVLSAC 428
             +F  + + +VV+W  +ITG    G   +A  L R+M  L++  V P+ +  + +L  C
Sbjct: 433 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 492

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +        +E          +   +   S +VD   + G L  ++ + + +P + +I  
Sbjct: 493 AILAAPARGKEIHGYAVRHA-LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI-T 550

Query: 489 WQTLLSACRVHG 500
           W  L+ A  +HG
Sbjct: 551 WNVLIMAYGMHG 562



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 216/495 (43%), Gaps = 31/495 (6%)

Query: 92  GNAKACLSLFCQ--MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWN 147
           GN  A L       M S   + +   L   IK++  L    +   IH   ++ G     +
Sbjct: 36  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 95

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           P V N+++  Y++CGR+  A  +F  +   A   +++N++I+   L    D  L   R M
Sbjct: 96  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 155

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
              G     FT  S L+A   L +       G + H F + +G  +  +     +L+  Y
Sbjct: 156 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 215

Query: 262 VKCGCLVEARRVF--DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            + G + +A+R+F      +  V++W++++    Q     EA++    +    ++ DG  
Sbjct: 216 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 275

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            +S +   +   L++ G+++HAY  K      ++ V++++VDMY     + +A ++F+ +
Sbjct: 276 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 335

Query: 379 PV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVE 435
           P   K +  W  +I GY + G+ +EA+ LF +M  +    P      +VL AC+ S    
Sbjct: 336 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 395

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             +     +        R    + ++D   R G+ D A+ +  +M   P +  W TL++ 
Sbjct: 396 GKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITG 453

Query: 496 CRVHGDL----ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           C V G +    +L RE+ +  L   G  P    +M+ +         C  L   AR K +
Sbjct: 454 CVVQGHVADAFQLAREMQQ--LEEGGVVPNAITLMTLLPG-------CAILAAPARGKEI 504

Query: 552 KKVAGRSWVEVDKEI 566
              A R  ++ D  +
Sbjct: 505 HGYAVRHALDTDVAV 519


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/567 (38%), Positives = 342/567 (60%), Gaps = 8/567 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G+Q+H   +K G +  P+V +++I++YSK      + ++FD  P KS  TW+++I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L  FR+M   G  PD+  + S  KACG L     G  +H   + +G  Y
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG--Y 157

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SLVD Y KCG + +AR +FD + +++V+SWS +I GYAQ ++  EA+ LF+Q
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
                + V+ F  SS++ V +    +E GK IH    K+     + V ++++ +Y KCG+
Sbjct: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGV 277

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I+ A ++F+E+P +N+  W  ++    +H   +   GLF +M    ++P+ +++L+VL A
Sbjct: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYA 337

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GLVE+ +EYFS L  D  ++P  EHY+ +VD LGRAG+L EA ++I+ MP++P+ +
Sbjct: 338 CSHAGLVEKGREYFS-LMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL+ CR+H D E+   V + +L +D  +   +V++SN +A AG + E  R+RK+ R
Sbjct: 397 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLR 456

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+KK  G SWVE   ++H F  GD +H    +I++ L E+E+ M++  G+V    + L
Sbjct: 457 DRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKA-GYVADTSFVL 515

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
             +  E K E++R HSE+LAI   L+       PG+ IRV KNLRVCGDCH  IK +SK 
Sbjct: 516 RAVDGEEKNETIRYHSERLAIAFGLI----TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC 571

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
              V +VRD  RFHRFE G CSCGDYW
Sbjct: 572 CGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 218/422 (51%), Gaps = 12/422 (2%)

Query: 25  NLLLDY--------GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           NLLL +        G+QLH  ++K G     +++++LI++Y+K      +  VFD+  ++
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +  +W++++  F QN      L  F +M +  V+P++    +  KA G L   + G  +H
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            + +K+G+  +  VG+S++DMY+KCG I +A  +FD MP +++++W+ MI GY       
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF++        ++FTF+S ++ C S   +  G  IHG  +   F  S  + +  +
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSS--SFVGSA 267

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG +  A +VFD I  +++  W+S+++  AQ  +      LF ++    ++ +
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                S++   +   LVE+G++  +         +T    S+VD+  + G + EA  +  
Sbjct: 328 FISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +MP++   + W  ++TG   H   + A  +  ++L  D    G+ ++ + +A + +G  E
Sbjct: 388 QMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGL-HVLLSNAYAAAGRYE 446

Query: 436 ES 437
           E+
Sbjct: 447 EA 448


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/686 (33%), Positives = 378/686 (55%), Gaps = 13/686 (1%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGFSF---DLMLNNDLIDMYAKCGEMNGACAVF 70
           RL + L+ C+ +  L  G  +H  L+    S    D    N LI++Y KC E   A  +F
Sbjct: 33  RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLF 92

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSV 129
           D M ERNVVSW A+M G+  +G     L LF  M  S   +PNEF  +   K+      +
Sbjct: 93  DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G Q HG  +K G   +  V N+++ MYS C    EA R+ D +P   L  +++ ++GY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           +  G   +GL + RK      + +  T+ S+L+   +L  +    Q+H  ++  GF   V
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +    G+L++ Y KCG ++ A+RVFD    +++   ++++  Y Q+++  EA+ LF ++ 
Sbjct: 273 EA--CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            + +  + +  + ++   A+ +L++QG  +H    K        V N++V+MY K G I+
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A + F+ M  +++VTW  +I+G   HGL +EA+  F +M+     P+ + ++ VL ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H G VE+   YF++L     ++P I+HY+CIV  L +AG   +A++ + + P++  +  W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           +TLL+AC V  +  LG++V E  +    ++   YV++SNIHA +  W    ++R L  ++
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           G+KK  G SW+ +  + H F   D+ HP    I+  + E+  ++K  LG+   V  A HD
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK-PLGYSPDVAGAFHD 629

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKIL 668
           + EE +E++L  HSEKLA+   L++      P K  + V KN+R+C DCH  IK +SKI 
Sbjct: 630 VDEEQREDNLSYHSEKLAVAYGLIK-----TPEKSPLYVTKNVRICDDCHSAIKLISKIS 684

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           K   V+RD+ RFH F  G CSC DYW
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDYW 710


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/665 (35%), Positives = 361/665 (54%), Gaps = 17/665 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH   V  GF+ D  + + L  +Y      N A  VFD +   + V W  L+ G     +
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL----S 200

Query: 94  AKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               L  F +M G+ SV+P+  TL++ + A+  +++   G  +H    K G   +  V  
Sbjct: 201 GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +I +Y+KCG +  A  +FD M    L+T+NA+I+GY + G     + LF+++   G  P
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
              T  + +      G       +H  ++ +G        ++ +L   Y +   +  ARR
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGL--DANAPVSTALTTLYCRFNDMDSARR 378

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            FD + +K++ SW+++I GYAQ      A+ LF+Q++  +++ +   +SS +   A    
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  GK +H   A     L+  V  +++DMY+KCG I EA  +F+ M  KNVV+W V+I+G
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG   EA+ L++ M+   + P    +L+VL ACSH GLV+E    F  + +D  + P
Sbjct: 499 YGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP 558

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVG 509
            IEH +C+VD LGRAG+L EA  LI   P   V P   IW  LL AC VH D +L +   
Sbjct: 559 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP--GIWGALLGACMVHKDGDLAKLAS 616

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + L  L+ +N   YV++SN++     ++E   +R+ A+S+ L K  G + +E+    H F
Sbjct: 617 QKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVF 676

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD  HP ++ I+  L ++  +M E  G+    + AL+D++EE KE  ++VHSEKLAI 
Sbjct: 677 MAGDRAHPQSDAIYLYLEKLTAKMIEA-GYRPDTEAALYDVEEEEKEHMVKVHSEKLAIA 735

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN +PG  IR+ KNLRVC DCH   K +SK+ + + VVRDA+RFH F  GVCS
Sbjct: 736 FGL----LNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCS 791

Query: 690 CGDYW 694
           CGDYW
Sbjct: 792 CGDYW 796



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 7/198 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L  C++   L  G  +H  +       ++ +   LIDMY KCG +  A  +FD M 
Sbjct: 426 ISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMD 485

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSW  ++ G+  +G     L L+  M  + + P   T  + + A      V+ G  
Sbjct: 486 NKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTT 545

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLI---TWNAMIAGY 189
           +    M S +   P + +   ++D+  + G++ EA  +    P KS +    W A++   
Sbjct: 546 VF-RSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFP-KSAVGPGIWGALLGAC 603

Query: 190 VLAGYSDKGLLLFRKMQE 207
           ++    D   L  +K+ E
Sbjct: 604 MVHKDGDLAKLASQKLFE 621


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 363/655 (55%), Gaps = 18/655 (2%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           N L+ MYA+ G +  A  +F        +VV+W  ++   +Q+G     +     M +  
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEA 167
           V+P+  T ++ + A   L  ++ G ++H   +K      N  V ++++DMY+   ++ +A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 168 ARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKAC 224
            ++FD++P   K L  WNAMI GY  AG  ++ L LF +M+ E G +P E T  S L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               +  G   +HG+++  G   +    +  +L+D Y + G    ARR+F +++   V+S
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGM--AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 444

Query: 285 WSSLILGYAQEENLAEAMELFR---QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           W++LI G   + ++A+A +L R   QL E  +  +   L +++   A  A   +GK+IH 
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 504

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           YA +     D +V +++VDMY KCG +  +  +F+ +P +N +TW V+I  YG HGL  E
Sbjct: 505 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 564

Query: 402 AVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           A  LF +M    +  P+ V ++A L+ACSHSG+V+   + F  +  D  ++P  +  +C+
Sbjct: 565 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 624

Query: 461 VDSLGRAGRLDEAKNLIESMPV-KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           VD LGRAGRLDEA  ++ SM   +  ++ W T+L ACR+H ++ LG   GE LL L+ + 
Sbjct: 625 VDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 684

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
             +YV++ NI++ AG W     +R   R +G+ K  G SW+EVD  IH F  G+  HP +
Sbjct: 685 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 744

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           E++H  +  +   M    G+       LHD+ +  K   LR HSEKLAI   L+R     
Sbjct: 745 EEVHAHMEALWGEMVAR-GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA--- 800

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG  IRV KNLRVC DCHE  K LSK++    V+RD  RFH F  G CSCGDYW
Sbjct: 801 -PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +L  CS+  LLD G ++H  ++K    + +  + + L+DMYA   ++  A  VFD +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 74  LE--RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVE 130
            +  + +  W A++CG+ Q G  +  L LF +M   +   P E T+++ + A     +  
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
               +HG  +K G   N  V N+++DMY++ G+ + A R+F ++    +++WN +I G V
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 453

Query: 191 LAGYSDKGLLLFRKMQ---EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           + G+      L R+MQ   E G +P+  T  + L  C  L +   G +IHG+ +      
Sbjct: 454 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 513

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-R 306
            V   +  +LVD Y KCGCL  +R VFD + +++ I+W+ LI+ Y       EA  LF R
Sbjct: 514 DV--AVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLK 364
                  + +     + +   +   +V++G Q+  +A +   G++ +  +   +VD+  +
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLF-HAMERDHGVEPTPDILACVVDILGR 630

Query: 365 CGLIDEATELFNEMPV--KNVVTWTVII 390
            G +DEA  +   M    + V  W+ ++
Sbjct: 631 AGRLDEAYAMVTSMETGEQQVSAWSTML 658



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 235/507 (46%), Gaps = 38/507 (7%)

Query: 34  LHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTAL---MC 86
           +H A ++ G        + N L+  YA+CG +  A  VF  + +   + VS+ +L   +C
Sbjct: 79  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIHGMCMKS 142
            F +  +A A L      G        FTL + ++A        ++V  G + H   +K+
Sbjct: 139 LFRRWDHALAALRAMLAGGHPL---TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 195

Query: 143 GF--EWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAK-SLITWNAMIAGYVLAGYSDKG 198
           G          N+++ MY++ G + +A R+F    P +  ++TWN M++  V +G  D+ 
Sbjct: 196 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 255

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +     M   G  PD  TF S L AC  L  +  G ++H ++I      +  + +A +LV
Sbjct: 256 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD-ELAANSFVASALV 314

Query: 259 DFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D Y     + +AR+VFD++    K +  W+++I GYAQ     EA+ LF ++   +    
Sbjct: 315 DMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA---- 370

Query: 317 GFVL--SSMMGVFADFALVE--QGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           GFV   ++M  V    A  E   GK+ +H Y  K     +  V N+++DMY + G  D A
Sbjct: 371 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 430

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDD--VEPDGVAYLAVLSAC 428
             +F  + + +VV+W  +ITG    G   +A  L R+M  L++  V P+ +  + +L  C
Sbjct: 431 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 490

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +        +E          +   +   S +VD   + G L  ++ + + +P + +I  
Sbjct: 491 AILAAPARGKEIHGYAVRHA-LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI-T 548

Query: 489 WQTLLSACRVHGDLELGREVGEILLRL 515
           W  L+ A  +HG   LG E   +  R+
Sbjct: 549 WNVLIMAYGMHG---LGGEATVLFDRM 572



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 216/495 (43%), Gaps = 31/495 (6%)

Query: 92  GNAKACLSLFCQ--MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWN 147
           GN  A L       M S   + +   L   IK++  L    +   IH   ++ G     +
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           P V N+++  Y++CGR+  A  +F  +   A   +++N++I+   L    D  L   R M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
              G     FT  S L+A   L +       G + H F + +G  +  +     +L+  Y
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 262 VKCGCLVEARRVF--DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            + G + +A+R+F      +  V++W++++    Q     EA++    +    ++ DG  
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            +S +   +   L++ G+++HAY  K      ++ V++++VDMY     + +A ++F+ +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 379 PV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVE 435
           P   K +  W  +I GY + G+ +EA+ LF +M  +    P      +VL AC+ S    
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             +     +        R    + ++D   R G+ D A+ +  +M   P +  W TL++ 
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITG 451

Query: 496 CRVHGDL----ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           C V G +    +L RE+ +  L   G  P    +M+ +         C  L   AR K +
Sbjct: 452 CVVQGHVADAFQLAREMQQ--LEEGGVVPNAITLMTLLPG-------CAILAAPARGKEI 502

Query: 552 KKVAGRSWVEVDKEI 566
              A R  ++ D  +
Sbjct: 503 HGYAVRHALDTDVAV 517


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 363/655 (55%), Gaps = 18/655 (2%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           N L+ MYA+ G +  A  +F        +VV+W  ++   +Q+G     +     M +  
Sbjct: 207 NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 266

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEA 167
           V+P+  T ++ + A   L  ++ G ++H   +K      N  V ++++DMY+   ++ +A
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 168 ARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKAC 224
            ++FD++P   K L  WNAMI GY  AG  ++ L LF +M+ E G +P E T  S L AC
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               +  G   +HG+++  G   +    +  +L+D Y + G    ARR+F +++   V+S
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGM--AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 444

Query: 285 WSSLILGYAQEENLAEAMELFR---QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           W++LI G   + ++A+A +L R   QL E  +  +   L +++   A  A   +GK+IH 
Sbjct: 445 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 504

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           YA +     D +V +++VDMY KCG +  +  +F+ +P +N +TW V+I  YG HGL  E
Sbjct: 505 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 564

Query: 402 AVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           A  LF +M    +  P+ V ++A L+ACSHSG+V+   + F  +  D  ++P  +  +C+
Sbjct: 565 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 624

Query: 461 VDSLGRAGRLDEAKNLIESMPV-KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           VD LGRAGRLDEA  ++ SM   +  ++ W T+L ACR+H ++ LG   GE LL L+ + 
Sbjct: 625 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 684

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
             +YV++ NI++ AG W     +R   R +G+ K  G SW+EVD  IH F  G+  HP +
Sbjct: 685 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 744

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           E++H  +  +   M    G+       LHD+ +  K   LR HSEKLAI   L+R     
Sbjct: 745 EEVHAHMEALWGEMVAR-GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA--- 800

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG  IRV KNLRVC DCHE  K LSK++    V+RD  RFH F  G CSCGDYW
Sbjct: 801 -PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +L  CS+  LLD G ++H  ++K    + +  + + L+DMYA   ++  A  VFD +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 74  LE--RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVE 130
            +  + +  W A++CG+ Q G  +  L LF +M   +   P E T+++ + A     +  
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
               +HG  +K G   N  V N+++DMY++ G+ + A R+F ++    +++WN +I G V
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 453

Query: 191 LAGYSDKGLLLFRKMQ---EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           + G+      L R+MQ   E G +P+  T  + L  C  L +   G +IHG+ +      
Sbjct: 454 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 513

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-R 306
            V   +  +LVD Y KCGCL  +R VFD + +++ I+W+ LI+ Y       EA  LF R
Sbjct: 514 DV--AVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLK 364
                  + +     + +   +   +V++G Q+  +A +   G++ +  +   +VD+  +
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLF-HAMERDHGVEPTPDILACVVDILGR 630

Query: 365 CGLIDEATELFNEMPV--KNVVTWTVII 390
            G +DEA  +   M    + V  W+ ++
Sbjct: 631 AGRLDEAYAMVTSMEAGEQQVSAWSTML 658



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 235/507 (46%), Gaps = 38/507 (7%)

Query: 34  LHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTAL---MC 86
           +H A ++ G        + N L+  YA+CG +  A  VF  + +   + VS+ +L   +C
Sbjct: 79  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIHGMCMKS 142
            F +  +A A L      G        FTL + ++A        ++V  G + H   +K+
Sbjct: 139 LFRRWDHALAALRAMLAGGHPL---TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 195

Query: 143 GF--EWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAK-SLITWNAMIAGYVLAGYSDKG 198
           G          N+++ MY++ G + +A R+F    P +  ++TWN M++  V +G  D+ 
Sbjct: 196 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 255

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +     M   G  PD  TF S L AC  L  +  G ++H ++I      +  + +A +LV
Sbjct: 256 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDD-ELAANSFVASALV 314

Query: 259 DFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D Y     + +AR+VFD++    K +  W+++I GYAQ     EA+ LF ++   +    
Sbjct: 315 DMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEA---- 370

Query: 317 GFVL--SSMMGVFADFALVE--QGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
           GFV   ++M  V    A  E   GK+ +H Y  K     +  V N+++DMY + G  D A
Sbjct: 371 GFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA 430

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDD--VEPDGVAYLAVLSAC 428
             +F  + + +VV+W  +ITG    G   +A  L R+M  L++  V P+ +  + +L  C
Sbjct: 431 RRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC 490

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +        +E          +   +   S +VD   + G L  ++ + + +P + +I  
Sbjct: 491 AILAAPARGKEIHGYAVRHA-LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI-T 548

Query: 489 WQTLLSACRVHGDLELGREVGEILLRL 515
           W  L+ A  +HG   LG E   +  R+
Sbjct: 549 WNVLIMAYGMHG---LGGEATVLFDRM 572



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/495 (23%), Positives = 216/495 (43%), Gaps = 31/495 (6%)

Query: 92  GNAKACLSLFCQ--MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF--EWN 147
           GN  A L       M S   + +   L   IK++  L    +   IH   ++ G     +
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVM--PAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           P V N+++  Y++CGR+  A  +F  +   A   +++N++I+   L    D  L   R M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
              G     FT  S L+A   L +       G + H F + +G  +  +     +L+  Y
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 262 VKCGCLVEARRVF--DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            + G + +A+R+F      +  V++W++++    Q     EA++    +    ++ DG  
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            +S +   +   L++ G+++HAY  K      ++ V++++VDMY     + +A ++F+ +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 379 PV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVE 435
           P   K +  W  +I GY + G+ +EA+ LF +M  +    P      +VL AC+ S    
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 393

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
             +     +        R    + ++D   R G+ D A+ +  +M   P +  W TL++ 
Sbjct: 394 GKEAVHGYVVKRGMAGNRFVQ-NALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITG 451

Query: 496 CRVHGDL----ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           C V G +    +L RE+ +  L   G  P    +M+ +         C  L   AR K +
Sbjct: 452 CVVQGHVADAFQLAREMQQ--LEEGGVVPNAITLMTLLPG-------CAILAAPARGKEI 502

Query: 552 KKVAGRSWVEVDKEI 566
              A R  ++ D  +
Sbjct: 503 HGYAVRHALDTDVAV 517


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/709 (33%), Positives = 378/709 (53%), Gaps = 55/709 (7%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN-G 92
           LHG   K G    L   N L+ +Y K   ++ A  +FD++  +N  +WT L+ GF +  G
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +++   SLF +M +    PN++TLS+ +K     ++++ G  IH   +++G   + V+ N
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK-------- 204
           SI+D+Y KC     A   F++M  K +++WN MI  Y+  G  +K L +FR         
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 205 -----------------------MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
                                  M  HG      TF+  L    SL  V  G Q+HG ++
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE----------------QKSVISW 285
           T G   +    I  SLV+ Y KCG + +A  +   +                 +  ++SW
Sbjct: 294 TFGL--NSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           SS++ GY       + M+ FR +    + VD   +++++   A+  ++E GKQIHAY  K
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +   +D  V +S++DMY K G +D+A  +F ++   NVV WT +I+G   HG  KEA+ L
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISL 471

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  ML   + P+ V ++ VL+ACSH GL+EE   YF  + +   + P +EHY+ +V+  G
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYG 531

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L EAKN I    +    ++W++ LS+CR+H +  +G+ V E+LL+    +P  Y++
Sbjct: 532 RAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYIL 591

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN+ +    W+E   +R L   +G+KK  G+SWV++  +IH F  GD +HP  ++I+  
Sbjct: 592 LSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSY 651

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L  +  R+K E+G+    K  + D++EE  E  +  HSEKLA+  +++    N  P   I
Sbjct: 652 LDSLIGRLK-EIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSII----NTSPRTPI 706

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLR+C DCH F K  S++L+   +VRD  RFH F+   CSCG+YW
Sbjct: 707 RIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 226/496 (45%), Gaps = 73/496 (14%)

Query: 6   FSLVSERQ---------RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDM 56
           FSL  E Q          L+  L+CCS+   + +G  +H  +++ G   D++L N ++D+
Sbjct: 119 FSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDL 178

Query: 57  YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV------- 109
           Y KC E   A + F+ M+E++VVSW  ++  +L+ G+ +  L +F    +  V       
Sbjct: 179 YLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTII 238

Query: 110 --------------------------KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
                                      P  F+++  + +S  LS VE G Q+HG  +  G
Sbjct: 239 DGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSS--LSLVEVGRQLHGRVLTFG 296

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMF-DVM---------------PAKSLITWNAMIA 187
              +  + +S+++MY KCGR+++A+ +  DV                P   +++W++M++
Sbjct: 297 LNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVS 356

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GYV  G  + G+  FR M     + D  T  + + AC + G +  G QIH ++   G   
Sbjct: 357 GYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGL-- 414

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +   +  SL+D Y K G L +A  +F+ I++ +V+ W+S+I G A      EA+ LF  
Sbjct: 415 RIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEG 474

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKC 365
           +    +  +      ++   +   L+E+G + +    K    ++  V +  S+V++Y + 
Sbjct: 475 MLNLGIIPNEVTFVGVLNACSHVGLIEEGCR-YFRMMKDTYHINPEVEHYTSMVNLYGRA 533

Query: 366 GLIDEATELFNEMPVKNVVT-WTVIITGYGKH---GLAKEAVGLFRKMLLDDVEPDGVAY 421
           G + EA     E  + +  + W   ++    H    + K       +MLL     D  AY
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSV----SEMLLQSAPSDPDAY 589

Query: 422 LAVLSACSHSGLVEES 437
           + + + CS +   +E+
Sbjct: 590 ILLSNMCSSNHQWDEA 605



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S L +  S+GS      +HG     G    + +  A  L+  YVK   L  A ++FD I 
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNS--ANYLLTLYVKSSNLDHAHKLFDEIT 94

Query: 279 QKSVISWSSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
            K+  +W+ LI G+A+    +E    LFR+++      + + LSS++   +    ++ GK
Sbjct: 95  HKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGK 154

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
            IHA+  +   G D  + NSI+D+YLKC   + A   F  M  K+VV+W ++I  Y + G
Sbjct: 155 GIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREG 214

Query: 398 LAKEAVGLFRKMLLDDV-------------------------------EPDGVAYLAVLS 426
             ++++ +FR     DV                               E   V +   L 
Sbjct: 215 DVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALI 274

Query: 427 ACSHSGLVEESQEYFSR-----LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
             S   LVE  ++   R     L +D  ++      S +V+  G+ GR+D+A  +++ +P
Sbjct: 275 LVSSLSLVEVGRQLHGRVLTFGLNSDGYIR------SSLVEMYGKCGRMDKASTILKDVP 328

Query: 482 VK 483
           + 
Sbjct: 329 LN 330


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 241/727 (33%), Positives = 380/727 (52%), Gaps = 83/727 (11%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFD--KMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           D++    ++  Y+  G +  A  +F+   M  R+ VS+ A++  F  + +  A L LF Q
Sbjct: 61  DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSKC- 161
           M      P+ FT S+ + A  +++  E    Q+H    K G    P V N+++  Y  C 
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180

Query: 162 -----------------------GRINEAA---------RMFDVMPAKSL---------I 180
                                  GR +E A         R  D++ A+ L         +
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WNAMI+GYV  G+ ++   L R+M   G   DE+T+TS + A  + G    G Q+H ++
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300

Query: 241 ITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           + +    S   V++   +L+  Y +CG LVEARRVFD +  K ++SW++++ G      +
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRI 360

Query: 299 AEAMELFRQLRERSLQVDGFVLSSM---------MGVF----------ADFAL------- 332
            EA  +FR++  RSL     ++S +         + +F           D+A        
Sbjct: 361 EEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420

Query: 333 -----VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                ++ G+Q+H+   ++      SV N+++ MY +CGL++ A  +F  MP  + V+W 
Sbjct: 421 SVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWN 480

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I    +HG   +A+ L+ KML +D+ PD + +L +LSACSH+GLV+E + YF  +   
Sbjct: 481 AMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVC 540

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P  +HYS ++D L RAG   EAKN+ ESMP +P   IW+ LL+ C +HG++ELG +
Sbjct: 541 YGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQ 600

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + LL L       Y+ +SN++A  G W+E  R+RKL R +G+KK  G SW+EV+  +H
Sbjct: 601 AADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVH 660

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D  HP    +++ L ++   M+ +LG+V   K+ LHD++ E KE +L  HSEKLA
Sbjct: 661 VFLVDDAVHPEVHAVYRYLEQLVHEMR-KLGYVPDTKFVLHDMESEQKEYALSTHSEKLA 719

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           +    V G +    G  IRVFKNLR+CGDCH   K +SK++    +VRD  RFH F  G 
Sbjct: 720 V----VYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGE 775

Query: 688 CSCGDYW 694
           CSC +YW
Sbjct: 776 CSCSNYW 782



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 216/505 (42%), Gaps = 121/505 (23%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           LS       +H   + SGF+  P++ N +ID Y K   I  A  +FD +P   ++    M
Sbjct: 9   LSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTM 68

Query: 186 IAGYVLAG------------------------------YSDKG---LLLFRKMQEHGEIP 212
           ++ Y  AG                              +S  G   L LF +M+  G +P
Sbjct: 69  LSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVP 128

Query: 213 DEFTFTSTLKACGSLGSVGGG-TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC----- 266
           D FTF+S L A   +        Q+H  +   G   SV +V+  +L+  YV C       
Sbjct: 129 DPFTFSSVLGALSLIADEETHCQQLHCEVFKWG-ALSVPSVL-NALMSCYVSCASSPLVN 186

Query: 267 ----LVEARRVFD------------------------------LIEQKS---VISWSSLI 289
               +  AR++FD                              L+E  +    ++W+++I
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV--- 346
            GY       EA +L R++    +Q+D +  +S++   ++  L   G+Q+HAY  +    
Sbjct: 247 SGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQ 306

Query: 347 PSG-LDTSVSNSIVDMYLKCG-------------------------------LIDEATEL 374
           PSG    SV+N+++ +Y +CG                                I+EA  +
Sbjct: 307 PSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSI 366

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EMPV++++TWTV+I+G  ++G  +E + LF +M L+ +EP   AY   +++CS  G +
Sbjct: 367 FREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSL 426

Query: 435 EESQEYFS---RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           +  Q+  S   +L +D  +       + ++    R G ++ A  +  +MP   S++ W  
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVG----NALITMYSRCGLVEAADTVFLTMPYVDSVS-WNA 481

Query: 492 LLSACRVHGDLELGREVGEILLRLD 516
           +++A   HG      ++ E +L+ D
Sbjct: 482 MIAALAQHGHGVQAIQLYEKMLKED 506



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 41/333 (12%)

Query: 27  LLDYGVQLHG----ALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW- 81
           L + G Q+H      +V+    F L +NN LI +Y +CG++  A  VFDKM  +++VSW 
Sbjct: 289 LFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWN 348

Query: 82  ------------------------------TALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
                                         T ++ G  QNG  +  L LF QM    ++P
Sbjct: 349 AILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEP 408

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
            ++  +  I +  VL S++NG Q+H   ++ G + +  VGN++I MYS+CG +  A  +F
Sbjct: 409 CDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVF 468

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
             MP    ++WNAMIA     G+  + + L+ KM +   +PD  TF + L AC   G V 
Sbjct: 469 LTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVK 528

Query: 232 GGTQIHGFLITSGFPYSVKTV--IAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSL 288
            G     +  T    Y +         L+D   + G   EA+ V + +  +     W +L
Sbjct: 529 EGRH---YFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEAL 585

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
           + G     N+   ++   +L E   Q DG  +S
Sbjct: 586 LAGCWIHGNMELGIQAADRLLELMPQQDGTYIS 618



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 4/187 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  CS    LD G QLH  ++++G    L + N LI MY++CG +  A  VF  M  
Sbjct: 414 AGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY 473

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+    + L+ +M    + P+  T  T + A      V+ G   
Sbjct: 474 VDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHY 533

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLA 192
               M+  +   P   +   +ID+  + G  +EA  + + MP +     W A++AG  + 
Sbjct: 534 FD-TMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIH 592

Query: 193 GYSDKGL 199
           G  + G+
Sbjct: 593 GNMELGI 599


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/567 (38%), Positives = 341/567 (60%), Gaps = 8/567 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G+Q+H   +K G +  P+V +++I++YSK      + ++FD  P KS  TW+++I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L  FR+M   G  PD+  + S  KACG L     G  +H   + +G  Y
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG--Y 157

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SLVD Y KCG + +AR +FD + +++V+SWS +I GYAQ ++  EA+ LF+Q
Sbjct: 158 YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
                + V+ F  SS++ V +    +E GK IH    K+     + V ++++ +Y KCG+
Sbjct: 218 ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGV 277

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I+ A ++F+E+P +N+  W  ++    +H   +   GLF +M    ++P+ + +L+VL A
Sbjct: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYA 337

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GLVE+ +EYFS L  D  ++P  EHY+ +VD LGRAG+L EA ++I+ MP++P+ +
Sbjct: 338 CSHAGLVEKGREYFS-LMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL+ CR+H D E+   V + +L +D  +   +V++SN +A AG + E  R+RK+ R
Sbjct: 397 VWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLR 456

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+KK  G SWVE   ++H F  GD +H    +I++ L E+E+ M++  G+V    + L
Sbjct: 457 DRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKA-GYVADTSFVL 515

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
             +  E K E++R HSE+LAI   L+       PG+ IRV KNLRVCGDCH  IK +SK 
Sbjct: 516 RAVDGEEKNETIRYHSERLAIAFGLI----TFPPGRPIRVMKNLRVCGDCHAAIKFMSKC 571

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
              V +VRD  RFHRFE G CSCGDYW
Sbjct: 572 CGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 217/422 (51%), Gaps = 12/422 (2%)

Query: 25  NLLLDY--------GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           NLLL +        G+QLH  ++K G     +++++LI++Y+K      +  VFD+  ++
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +  +W++++  F QN      L  F +M +  V+P++    +  KA G L   + G  +H
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            + +K+G+  +  VG+S++DMY+KCG I +A  +FD MP +++++W+ MI GY       
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF++        ++FTF+S ++ C S   +  G  IHG  +   F  S  + +  +
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSS--SFVGSA 267

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG +  A +VFD I  +++  W+S+++  AQ  +      LF ++    ++ +
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
                S++   +   LVE+G++  +         +T    S+VD+  + G + EA  +  
Sbjct: 328 FIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIK 387

Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +MP++   + W  ++TG   H   + A  +  ++L  D    G+  L + +A + +G  E
Sbjct: 388 QMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVL-LSNAYAAAGRYE 446

Query: 436 ES 437
           E+
Sbjct: 447 EA 448


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/677 (33%), Positives = 376/677 (55%), Gaps = 14/677 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ +  + YG  +H   ++ G    + + N L++MY+  G++  A  +F  M  R+++SW
Sbjct: 257 CASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISW 316

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             ++  ++QNGN    L    Q+  ++  P+  T S+ + A     ++ +G  +H M ++
Sbjct: 317 NTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQ 376

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
                N +VGNS+I MY KC  I +A R+F +MP   +++ N +I  Y +     K + +
Sbjct: 377 LSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQV 436

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGG----GTQIHGFLITSGFPYSVKTVIAGSL 257
           F  M+  GE+  +  + + +   GS  S       G  +H + I +GF       ++ SL
Sbjct: 437 FFWMRR-GEV--KLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFL--SDDYVSNSL 491

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG L  +  VF  I  +SV+SW+++I    Q  +  E+++LF  +R     +D 
Sbjct: 492 ITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDH 551

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             L+  M   A  A +E+G Q+H    K   G D+ V N+ +DMY KCG +DE  ++  +
Sbjct: 552 ICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPD 611

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
             ++    W  +I+GY ++G  KEA   F+ M+     PD V ++ +LSACSH+GLV++ 
Sbjct: 612 PAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKG 671

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            +Y++ + +   + P I+H  CIVD LGR GR  EA+  IE MPV P+  IW++LLS+ R
Sbjct: 672 IDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSR 731

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            H +L++GR+  + LL LD  +   YV++SN++A +  W++ +R+R   ++  L K+   
Sbjct: 732 THKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPAC 791

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW++  KE+  F  GD +H   +KI+  L E+  +++ E+G+V     ALHD  EE KE+
Sbjct: 792 SWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLR-EVGYVADTSSALHDTDEEQKEQ 850

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           +L  HSEKLA+   L+        G  +R+FKNLRVC DCH   K +S +     V+RD 
Sbjct: 851 NLWNHSEKLALAYGLI----TVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDP 906

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+GG CSC D+W
Sbjct: 907 YRFHHFKGGSCSCSDFW 923



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 221/480 (46%), Gaps = 16/480 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H    K G   ++ +   L+ +Y     +  A  +F +M ERNVVSWTALM     
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG+ +  L  + +M    +  N    +T +   G L     G+Q+    + SG +    V
Sbjct: 123 NGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSV 182

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            NS+I M    GR+++A ++F  M  +  ++WNA+++ Y   G   K   +F  M+  G 
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           +  D  T  S +  C S   V  G+ +H   + +G    +  V A  LV+ Y   G L +
Sbjct: 243 LRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNA--LVNMYSSAGKLAD 300

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  +F  + ++ +ISW+++I  Y Q  N  +A++   QL   +   D    SS +G  + 
Sbjct: 301 AEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSS 360

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +  G+ +HA   ++    +  V NS++ MY KC  I++A  +F  MP  +VV+  ++
Sbjct: 361 PGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNIL 420

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS------GLVEESQEYFSR 443
           I  Y       +A+ +F  M   +V+ + +  + +L + + S      GL   +    + 
Sbjct: 421 IGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAG 480

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
             +D  +       + ++    + G L+ + N+ + + +  S+  W  +++A   HG  E
Sbjct: 481 FLSDDYVS------NSLITMYAKCGDLESSNNVFQRI-INRSVVSWNAMIAANVQHGHGE 533



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 163/348 (46%), Gaps = 11/348 (3%)

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS-VGGGTQIHGF 239
           +W   I+G V  G       + R M+E G     F   S + AC         G  IH  
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
              +G    V   I  +L+  Y     +++A+R+F  + +++V+SW++L++  +   +L 
Sbjct: 70  TQKAGL--MVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLE 127

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNS 357
           EA+  +R++R   +  +    ++++ +         G Q+ ++   + SGL    SV+NS
Sbjct: 128 EALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHV--IVSGLQRQVSVANS 185

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEP 416
           ++ M    G + +A +LF  M  ++ V+W  +++ Y   GL  ++  +F  M     +  
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           D     +++S C+ S  V       S LC    +   I   + +V+    AG+L +A+ L
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHS-LCLRTGLHSYIPVVNALVNMYSSAGKLADAEFL 304

Query: 477 IESMPVKPSIAIWQTLLSACRVHG-DLELGREVGEILLRLDGDNPVNY 523
             +M  +  I+ W T++S+   +G +++  + +G++L   +G + + +
Sbjct: 305 FWNMSRRDLIS-WNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTF 351



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 15/224 (6%)

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
           + ++  SW + I G  +    + A  + R +RER + + GF L+S++     +   E+G+
Sbjct: 4   DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERW---EEGR 60

Query: 338 ----QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
                IHA   K    ++  +  +++ +Y     + +A  LF EMP +NVV+WT ++   
Sbjct: 61  ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES---QEYFSRLCNDKRM 450
             +G  +EA+G +R+M  + +  +  A+  V+S C   G +E+     + FS +     +
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLC---GSLEDEVAGLQVFSHVIVSG-L 176

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           + ++   + ++  LG  GR+ +A+ L   M  + +++ W  L+S
Sbjct: 177 QRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVS-WNALVS 219


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/678 (33%), Positives = 373/678 (55%), Gaps = 9/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G  +HG  VK G   ++ L N L+ +Y+  G    A  +F +M ER++
Sbjct: 268 LSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDL 327

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +++  ++Q+G     L +F +M     + N  T ++ + A        NG  +HG 
Sbjct: 328 ISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGF 387

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +  G +   ++GN++I  Y KC ++ EA ++F  MP    +TWNA+I G+      ++ 
Sbjct: 388 VVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEA 447

Query: 199 LLLFRKMQEHGEIP-DEFTFTSTLKACGSLGS-VGGGTQIHGFLITSGFPYSVKTVIAGS 256
           +  F+ M+E      D  T  + L +C +    +  G  IH   + +GF   +   +  S
Sbjct: 448 VAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGF--DLDQHVQSS 505

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KCG L  +  +FD +  K+   W+++I   A+     EA++L  ++R   ++ D
Sbjct: 506 LITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFD 565

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F  S+ + V AD A++E+G+Q+H    K+   LD  + N+ +DMY KCG +D+A  +  
Sbjct: 566 QFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILP 625

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +   ++ ++W  +I+   +HG   +A   F  ML   V+P+ V+++ +LSACSH GLV+E
Sbjct: 626 QPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDE 685

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
              Y++ + +   ++P IEH  C++D LGR+GRL EA+  I  MP+ P+  +W++LL++C
Sbjct: 686 GLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASC 745

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R++ +L+LGR+  + LL LD  +   YV+ SN+ A  G W + E +R    +  ++K   
Sbjct: 746 RIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPA 805

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWV+    I  F  GD THP  E+I+  L+ + K + E  G+V    Y+L D  EE KE
Sbjct: 806 HSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEA-GYVPDTSYSLQDTDEEQKE 864

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            ++  HSE++A+   L+    N   G  +R+FKNLRVCGDCH F K +S +L    V+RD
Sbjct: 865 HNMWSHSERIALAFGLI----NIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRD 920

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F  G CSC DYW
Sbjct: 921 PYRFHHFTNGNCSCSDYW 938



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 239/504 (47%), Gaps = 23/504 (4%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C   +++   G Q HG  +K G  +D+ +    +  YA  G ++ A  +F++M +RNVVS
Sbjct: 68  CNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVS 127

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           WT+LM  +  NG+ K  ++ + +M    +  NE  ++  I + G L  +  G Q+ G  +
Sbjct: 128 WTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHAL 187

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G E      NS+I M+  CG INEA  +F+ M  +  I+WN++I+        ++   
Sbjct: 188 KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFR 247

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
            F  M+   E  +  T +  L  CGS+  +  G  +HG  +  G   ++   +  +L+  
Sbjct: 248 YFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI--CLCNTLLSV 305

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y   G   +A  +F  + ++ +ISW+S++  Y Q+     A+++F ++     +++    
Sbjct: 306 YSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTF 365

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           +S +    D      GK +H +   +    +  + N+++  Y KC  + EA ++F  MP 
Sbjct: 366 TSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK 425

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL----SACSHSGLVE- 435
            + VTW  +I G+  +    EAV  F+  L+ +    GV Y+ ++    S  +H  L++ 
Sbjct: 426 LDKVTWNALIGGFANNAELNEAVAAFK--LMREGSTSGVDYITIVNILGSCLTHEDLIKY 483

Query: 436 ----ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
                +    +    D+ ++      S ++    + G L  +  + + +  K S ++W  
Sbjct: 484 GIPIHAHTVVTGFDLDQHVQ------SSLITMYAKCGDLHSSSYIFDQLVFKTS-SVWNA 536

Query: 492 LLSACRVHGDLELGREVGEILLRL 515
           +++A   +G    G E  ++++R+
Sbjct: 537 IIAANARYG---FGEEALKLVVRM 557



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 231/485 (47%), Gaps = 26/485 (5%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY+K G +N A  VFD+M ERN  SW  +M G+++ G+    +  F  +    +KP+ F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 116 LSTNIKASGVLSSV-ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           +++ + A    S + + G Q HG  +K G  ++  VG S +  Y+  G ++ A +MF+ M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           P +++++W +++  Y   G   + +  +++M+  G   +E      + +CG L  +  G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+ G  +  G     K   A SL+  +  CG + EA  +F+ + ++  ISW+S+I   AQ
Sbjct: 181 QLLGHALKFGL--ETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                E+   F  +R    +++   LS ++ +      ++ GK +H  A K     +  +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            N+++ +Y   G   +A  +F  MP +++++W  ++  Y + G    A+ +F +ML    
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK---------RMKPRIEHYSCIVDSLG 465
           E + V + + L+AC          E+F+   N K          ++  +   + ++   G
Sbjct: 359 EINYVTFTSALAACL-------DPEFFT---NGKILHGFVVVLGLQDELIIGNTLITFYG 408

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI-LLRLDGDNPVNYV 524
           +  ++ EAK + + MP K     W  L+       + EL   V    L+R    + V+Y+
Sbjct: 409 KCHKMAEAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYI 465

Query: 525 MMSNI 529
            + NI
Sbjct: 466 TIVNI 470


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/669 (35%), Positives = 352/669 (52%), Gaps = 66/669 (9%)

Query: 35  HGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           HG +      FDL    D      ++  Y + G +  A  +FD   E + +SW ALM G+
Sbjct: 213 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGY 272

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFE 145
           +Q    +    +F +M      P    +S N   SG        E         ++  F 
Sbjct: 273 VQRSQIEEAQKMFNKM------PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFT 326

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W      +I+  Y++ G + EA R+FD MP K+ ++WNAM+A YV            R M
Sbjct: 327 WT-----AIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQR----------RMM 371

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +E  E+ D          C ++ S                     T++ G     Y + G
Sbjct: 372 EEAKELFDAMP-------CRNVASW-------------------NTMLTG-----YAQAG 400

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L EAR +F ++ QK  +SW++++  Y+Q     E ++LF+++      V+    + ++ 
Sbjct: 401 MLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLS 460

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD A +E G Q+H+   K   G+   V N+++ MY KCG ++EA   F EM  ++VV+
Sbjct: 461 TCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVS 520

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY +HG  KEA+ +F  M     +PD +  + VL+ACSHSGLVE+   YF  + 
Sbjct: 521 WNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 580

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  +  + EHY+C++D LGRAGRLDEA NL++ MP +P   +W  LL A R+H + ELG
Sbjct: 581 RDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELG 640

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           R   E +  L+ +N   YV++SNI+A +G W + +++R +   +G+KKV G SW+EV  +
Sbjct: 641 RNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNK 700

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  E I+  L +++ RMK + G+V      LHD++EE KE  L+ HSEK
Sbjct: 701 VHTFSVGDSVHPEREDIYAFLEDLDIRMK-KAGYVSATDMVLHDVEEEEKEHMLKYHSEK 759

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+      G L   PG+ IRV KNLRVC DCH   K +S I   + ++RD+ RFH F  
Sbjct: 760 LAVAY----GILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRD 815

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 816 GSCSCGDYW 824



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 197/415 (47%), Gaps = 45/415 (10%)

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           Q G   + P     S +++A+    S          C+    +   +  N  I  + + G
Sbjct: 67  QFGKPPMLP-----SRHLRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAG 121

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           R+ +A R+F  MP +S  T+N M+AGY   G   + L  FR +      PD F++ + L 
Sbjct: 122 RVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PDSFSYNTLLH 177

Query: 223 ACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           A G   S+     +   + +     Y+V       ++  +   G +  AR  FDL  +K 
Sbjct: 178 ALGVSSSLADVRALFDEMPVKDSVSYNV-------MISSHANHGLVSLARHYFDLAPEKD 230

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
            +SW+ ++  Y +   + EA ELF    +   + D    +++M  +   + +E+ +++  
Sbjct: 231 AVSWNGMLAAYVRNGRIQEARELF----DSRTEWDAISWNALMAGYVQRSQIEEAQKMF- 285

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
              K+P   D    N++V  Y + G + EA  LF+  P+++V TWT I++GY ++G+ +E
Sbjct: 286 --NKMPQ-RDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEE 342

Query: 402 AVGLFRKMLLDDVEPD--GVAYLAVLSACSHSGLVEESQEYFSRL-CNDKRMKPRIEHYS 458
           A  +F      D  PD   V++ A+++A     ++EE++E F  + C +      +  ++
Sbjct: 343 AKRVF------DAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRN------VASWN 390

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVG 509
            ++    +AG LDEA+ +   MP K +++ W  +L+A    G     L+L +E+G
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVS-WAAMLAAYSQIGFSEETLQLFKEMG 444



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 196/475 (41%), Gaps = 105/475 (22%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +  N +I  +A  G ++ A   FD   E++ VSW  ++  +++NG  +    LF    
Sbjct: 199 DSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF---- 254

Query: 106 SSSVKPNEFTLSTNIKASGVL--SSVENGMQI-HGMCMKSGFEWNPVVG----------- 151
               +     +S N   +G +  S +E   ++ + M  +    WN +V            
Sbjct: 255 --DSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEA 312

Query: 152 ---------------NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV------ 190
                           +I+  Y++ G + EA R+FD MP K+ ++WNAM+A YV      
Sbjct: 313 RRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMME 372

Query: 191 --------------------LAGYSDKGLL------------------------------ 200
                               L GY+  G+L                              
Sbjct: 373 EAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGF 432

Query: 201 ------LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
                 LF++M   GE  +   F   L  C  + ++  G Q+H  LI +G  Y V   + 
Sbjct: 433 SEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAG--YGVGCFVG 490

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y KCG + EA   F+ +E++ V+SW+++I GYA+     EA+E+F  +R+ S +
Sbjct: 491 NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK 550

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            D   L  ++   +   LVE+G   + Y+     G+ T   +   ++D+  + G +DEA 
Sbjct: 551 PDDITLVGVLAACSHSGLVEKGIS-YFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAV 609

Query: 373 ELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            L  +MP +   T W  ++     H  ++       K+   ++EP+      +LS
Sbjct: 610 NLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIF--ELEPENAGMYVLLS 662



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR +F+ V         L  C+    L+ G+QLH  L+K G+     + N L+ MY KC
Sbjct: 450 VNRSAFACV---------LSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKC 500

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A + F++M ER+VVSW  ++ G+ ++G  K  L +F  M  +S KP++ TL   +
Sbjct: 501 GSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVL 560

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A      VE G+   + M    G    P     +ID+  + GR++EA  +   MP +  
Sbjct: 561 AACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPD 620

Query: 180 IT-WNAMIAGYVLAGYSDKG 198
            T W A++    +   S+ G
Sbjct: 621 STMWGALLGASRIHRNSELG 640


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/565 (38%), Positives = 333/565 (58%), Gaps = 11/565 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM-FDVMPAKSLITWNAMIAGYV 190
           G   HG+ +  G   + +  N +I++Y+KCGR N+ AR+ FD+M  +S+++WN MIAGY 
Sbjct: 76  GKSCHGLAIHFGLVTDTLTCNILINLYTKCGR-NDCARLVFDIMHVRSIVSWNTMIAGYT 134

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            +G   + L LF +M   G    EFT +ST+ AC +  ++    Q+H   I         
Sbjct: 135 HSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHT--IALKLALDSN 192

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + +  +++D Y KC  + +A  VF+ + ++++++WSSL  GY Q     EA+ LFR  + 
Sbjct: 193 SFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQR 252

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +++  F LS+++   A  AL  +G Q+HA   K     +  V+ S+VD+Y +CG I++
Sbjct: 253 EGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEK 312

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  LF  M  KNVV W  +I  + +H  + EA+ LF KM    + P+ V YL+VLS CSH
Sbjct: 313 AYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSH 372

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVE+ + YFS L +D+ ++P + HYSC+VD LGR+G+ DEA  L+  MP +P+ ++W 
Sbjct: 373 AGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWG 432

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL +CR + ++ L R   E L +L+ DN  N+V++SN++A +G+W      RK  +  G
Sbjct: 433 SLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSG 492

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
            KK  GRSW+E   ++H F  G+  HP    I+  L E+   M+ +      ++  LHD+
Sbjct: 493 AKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMR-KFARRTSIECDLHDV 551

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILK 669
             E KEE L+ HSEKLA+       GL   P  + I + KNLR+CGDCH F+K  + I +
Sbjct: 552 HAEQKEELLKHHSEKLALSF-----GLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITE 606

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
            + +VRD  RFH F+ G CSCGD+W
Sbjct: 607 RLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 15/382 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N +  S +S+R      L+ C+K   L  G   HG  +  G   D +  N LI++Y KCG
Sbjct: 53  NLIDVSAISQR------LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCG 106

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
             + A  VFD M  R++VSW  ++ G+  +G     L LF +M       +EFTLS+ I 
Sbjct: 107 RNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTIC 166

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A     ++    Q+H + +K   + N  VG +I+D+Y+KC  I +A  +F+ MP ++L+T
Sbjct: 167 ACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVT 226

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W+++ AGYV  G  ++ L LFR  Q  G    EFT ++ L AC SL     G Q+H  ++
Sbjct: 227 WSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVIL 286

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             GF  +    +A SLVD Y +CG + +A  +F  +E K+V+ W+++I  +++  +  EA
Sbjct: 287 KCGFHGNF--FVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEA 344

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNS 357
           M LF ++++  +  +     S++ V +   LVE+G+   +         P+ L  S    
Sbjct: 345 MILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSC--- 401

Query: 358 IVDMYLKCGLIDEATELFNEMP 379
           +VD+  + G  DEA EL N+MP
Sbjct: 402 MVDVLGRSGKTDEAWELLNKMP 423


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 364/669 (54%), Gaps = 55/669 (8%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCG-----EMNGACAVFDKMLERNVVSWTALMCG 87
           Q H  +++ G   D  +   L+  YA            +  VFD + + NV  W  ++  
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 112

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            ++N      + L+ +M  +  +PN++T    +KA      V  G+Q+H   +K G   +
Sbjct: 113 CIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGD 172

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             + +S I MY+  GR+ EA R+ D    +   + WNAMI GY+  G  +    LF  M 
Sbjct: 173 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM- 231

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
                PD  +  ST  A                 + SGF                 +CG 
Sbjct: 232 -----PDR-SMISTWNA-----------------MISGFS----------------RCGM 252

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  AR  FD ++++  ISWS++I GY QE    EA+E+F Q+++  ++   FVL S++  
Sbjct: 253 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSA 312

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A+   ++QG+ IH YA +    LD  +  S+VDMY KCG ID A E+F +M  K V +W
Sbjct: 313 CANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW 372

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I G   HG A++A+ LF KM   D+ P+ + ++ VL+AC+H GLV++    F+ +  
Sbjct: 373 NAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 429

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           +  ++P+IEHY CIVD LGRAG L EA+ ++ S+P +P+ A+W  LL ACR HG++ELG 
Sbjct: 430 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGE 489

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK-E 565
            VG+ILL L+  N   Y ++SNI+A AG W E   +RKL + +G+K   G S +++ + E
Sbjct: 490 RVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGE 549

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD +HP  + I+Q+L ++++R++ E G+       L DI EE KE ++  HSEK
Sbjct: 550 VHKFIIGDGSHPQVKDIYQMLDKVKERLQME-GYEPDPSQVLFDIDEEEKETAVWQHSEK 608

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAIG  L+    N  PG  IR+ KNLRVC DCH   K +S++     +VRD  R+H F  
Sbjct: 609 LAIGFGLI----NTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRN 664

Query: 686 GVCSCGDYW 694
           G CSC D+W
Sbjct: 665 GACSCKDFW 673



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 179/411 (43%), Gaps = 78/411 (18%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF---------------SF-----------------D 46
           L+ CS + ++  GVQ+H  LVK G                SF                 D
Sbjct: 145 LKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 204

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNV---------------------------- 78
            +  N +ID Y + GE+  A  +F+ M +R++                            
Sbjct: 205 AVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMK 264

Query: 79  ----VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
               +SW+A++ G++Q G     L +F QM    ++P +F L + + A   L +++ G  
Sbjct: 265 ERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRW 324

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH    ++  + + V+G S++DMY+KCGRI+ A  +F+ M  K + +WNAMI G  + G 
Sbjct: 325 IHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGR 384

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  + LF KM  +   P+E TF   L AC   G V  G  I   +      Y V+  I 
Sbjct: 385 AEDAIDLFSKMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKE---YGVEPQIE 438

Query: 255 --GSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRER 311
             G +VD   + G L EA +V   I  +   + W +L+    +  N+     + + L E 
Sbjct: 439 HYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLEL 498

Query: 312 SLQVDG-FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             Q  G + L S   ++A     E+  ++     +   G+ T+   SI+D+
Sbjct: 499 EPQNSGRYTLLS--NIYAKAGRWEEVGEVRKLMKE--RGIKTTPGTSIIDL 545



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 5/176 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G  +H    +     D +L   L+DMYAKCG ++ A  VF+KM 
Sbjct: 306 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 365

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            + V SW A++ G   +G A+  + LF +M    + PNE T    + A      V+ G+ 
Sbjct: 366 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLT 422

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           I + M  + G E        I+D+  + G + EA ++   +P + +   W A++  
Sbjct: 423 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/662 (34%), Positives = 380/662 (57%), Gaps = 32/662 (4%)

Query: 55  DMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN-E 113
           ++Y  C  + G   +  + ++  +  +   +C F + GN +  + L  Q    S KP+ E
Sbjct: 46  NLYHSCATI-GTSVLPSETIDCKITDYNIEICRFCELGNLRRAMELINQ----SPKPDLE 100

Query: 114 F-TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
             T  + ++    L S+++G +IH +   +  E + V+G+ ++ MY  CG + E  R+FD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG--------EIPDEF------TFT 218
            +  + +  WN ++ GY   G   + L LF++M+E G        ++ DE       ++ 
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA------GSLVDFYVKCGCLVEARR 272
           S +    S G    G  +   ++  G    + T+++        L+D Y K G L  A +
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQ 280

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ + ++SV+SW+S+I GYA+E     ++ LF ++ +  L  +   ++ ++   A  A 
Sbjct: 281 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAA 340

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E+G++IH +  +    LD  V+N++VDMYLKCG +  A  LF+ +P K++V+WTV+I G
Sbjct: 341 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 400

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG   EA+  F +M    +EPD V+++++L ACSHSGL++E   +F+ + N+  ++P
Sbjct: 401 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 460

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           + EHY+CIVD L RAG L +A   I+ MP++P   IW  LL  CR++ D++L  +V E +
Sbjct: 461 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 520

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             L+ +N   YV+++NI+A+A  W E ++LR+    +GL+K  G SW+E+  ++H F  G
Sbjct: 521 FELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTG 580

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HPL  KI  +L +   RMKEE G    ++YAL    +  KE +L  HSEK+A+    
Sbjct: 581 DSSHPLANKIELLLKKTRTRMKEE-GHFPKMRYALIKADDTEKEMALCGHSEKIAMAF-- 637

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
             G L+  PGK +RV KNLRVCGDCHE  K +SK++K   ++RD+ RFH F+ G CSC  
Sbjct: 638 --GILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRG 695

Query: 693 YW 694
           +W
Sbjct: 696 HW 697



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 209/435 (48%), Gaps = 34/435 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    +  G ++H  +       D +L + L+ MY  CG++     +FDK+    V
Sbjct: 108 LQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKV 167

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT------------LSTNIKASGVL 126
             W  LM G+ + GN +  LSLF +M    ++  E              +S N   SG +
Sbjct: 168 FLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYV 227

Query: 127 SS--VENGMQIHGMCMKSGFEWN--------PVVGNSIIDMYSKCGRINEAARMFDVMPA 176
           S+   E G+ +    +  G   +          + N ++DMYSK G +N A ++F+ M  
Sbjct: 228 SNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGE 287

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +S+++W +MIAGY   G SD  + LF +M++    P+  T    L AC SL ++  G +I
Sbjct: 288 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEI 347

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG ++ +GF  S+   +A +LVD Y+KCG L  AR +FD+I +K ++SW+ +I GY    
Sbjct: 348 HGHILRNGF--SLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 405

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDT 352
             +EA+  F ++R   ++ D     S++   +   L+++G      +       P     
Sbjct: 406 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHY 465

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           +    IVD+  + G + +A +    MP++ +   W  ++ G   +   K A  +   +  
Sbjct: 466 AC---IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVF- 521

Query: 412 DDVEPDGVAYLAVLS 426
            ++EP+   Y  +L+
Sbjct: 522 -ELEPENTGYYVLLA 535


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/665 (34%), Positives = 378/665 (56%), Gaps = 15/665 (2%)

Query: 34  LHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           LH  ++K G  FSF     + LID Y KC  +  A  +FD+M  R++V+W +++   +  
Sbjct: 23  LHTHILKSGSLFSF---FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP-VV 150
           G  K  + L+  M    V P+ +T S   KA   +     G + HG+ +  GFE +   V
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
              I+DMY+K G++ +A  +FD +  K ++ + A+I GY   G   + L +F  M     
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+E+T  S L +CG+LG +  G  IHG ++ SG    V +    SL+  Y KC  + ++
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVAS--QTSLLTMYSKCNMVEDS 257

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            +VF+ +   S ++W+S I+G  Q      A+ +FR++   S+  + F  SS++   +  
Sbjct: 258 IKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSL 317

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A++E G+QIHA   K+    +  V  +++ +Y KCG +++A  +F  +   +VV+   +I
Sbjct: 318 AMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMI 377

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
             Y ++G   EA+ LF +M     +P+ V ++++L AC+++GLVEE  + FS + N+  +
Sbjct: 378 YAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSI 437

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +   +HY+C++D LGRA R +EA  LIE     P +  W+TLL+AC++HG++E+  +  +
Sbjct: 438 ELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMK 496

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L     +   +++++NI+A AG W+    ++   R   LKK    SWV++D+E+H F 
Sbjct: 497 KMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFM 556

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP   +I ++L E+ +++   LG+    K+ L D++EE K  +L  HSEKLAI  
Sbjct: 557 AGDLSHPRAHEISEMLHELIEKVI-TLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAF 615

Query: 631 ALVRG-GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           AL +  G N      IR+FKNLRVCGDCH +IK +S +     + RDA RFH F+GG+CS
Sbjct: 616 ALWKTCGKN----TAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICS 671

Query: 690 CGDYW 694
           C DYW
Sbjct: 672 CKDYW 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 211/404 (52%), Gaps = 5/404 (1%)

Query: 31  GVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G + HG  V +GF   D  +   ++DMYAK G+M  A  VFD++L+++VV +TAL+ G+ 
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYN 179

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q G     L +F  M  S +KPNE+TL++ + + G L  + NG  IHG+ +KSG E    
Sbjct: 180 QRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVA 239

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
              S++ MYSKC  + ++ ++F+ +   S +TW + I G V  G  +  L +FR+M    
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS 299

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+ FTF+S L AC SL  +  G QIH   +  G   +    +  +L+  Y KCG + +
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGN--KYVDAALIHLYGKCGNVEK 357

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR VF+ + +  V+S +++I  YAQ     EA+ELF ++++   + +     S++    +
Sbjct: 358 ARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNN 417

Query: 330 FALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             LVE+G QI +      S  L       ++D+  +    +EA  L  E    +V+ W  
Sbjct: 418 AGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRT 477

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           ++     HG  + A    +KM LD    DG  ++ + +  + +G
Sbjct: 478 LLNACKIHGEVEMAEKFMKKM-LDQAPRDGGTHILLTNIYASAG 520



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 1/275 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C     L  G  +HG +VK G    +     L+ MY+KC  +  +  VF+ + 
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V+WT+ + G +QNG  +  LS+F +M   S+ PN FT S+ + A   L+ +E G Q
Sbjct: 266 YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQ 325

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K G + N  V  ++I +Y KCG + +A  +F+ +    +++ N MI  Y   G+
Sbjct: 326 IHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGF 385

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +M++ G  P+  TF S L AC + G V  G QI   LI +     +     
Sbjct: 386 GHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHY 444

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
             ++D   +     EA  + +  +   VI W +L+
Sbjct: 445 TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLL 479


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 363/655 (55%), Gaps = 18/655 (2%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           N L+ MYA+ G +  A  +F        +VV+W  ++   +Q+G     +     M +  
Sbjct: 55  NALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG 114

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEA 167
           V+P+  T ++ + A   L  ++ G ++H   +K      N  V ++++DMY+   ++ +A
Sbjct: 115 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 174

Query: 168 ARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKAC 224
            ++FD++P   K L  WNAMI GY  AG  ++ L LF +M+ E G +P E T  S L AC
Sbjct: 175 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 234

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
               +  G   +HG+++  G   +    +  +L+D Y + G    ARR+F +++   V+S
Sbjct: 235 ARSEAFAGKEAVHGYVVKRGM--AGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292

Query: 285 WSSLILGYAQEENLAEAMELFR---QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           W++LI G   + ++A+A +L R   QL E  +  +   L +++   A  A   +GK+IH 
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 352

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           YA +     D +V +++VDMY KCG +  +  +F+ +P +N +TW V+I  YG HGL  E
Sbjct: 353 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 412

Query: 402 AVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           A  LF +M    +  P+ V ++A L+ACSHSG+V+   + F  +  D  ++P  +  +C+
Sbjct: 413 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 472

Query: 461 VDSLGRAGRLDEAKNLIESMPV-KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           VD LGRAGRLDEA  ++ SM   +  ++ W T+L ACR+H ++ LG   GE LL L+ + 
Sbjct: 473 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEE 532

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
             +YV++ NI++ AG W     +R   R +G+ K  G SW+EVD  IH F  G+  HP +
Sbjct: 533 ASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPAS 592

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           E++H  +  +   M    G+       LHD+ +  K   LR HSEKLAI   L+R     
Sbjct: 593 EEVHAHMEALWGEMVAR-GYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAA--- 648

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG  IRV KNLRVC DCHE  K LSK++    V+RD  RFH F  G CSCGDYW
Sbjct: 649 -PGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 194/388 (50%), Gaps = 15/388 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +L  CS+  LLD G ++H  ++K    + +  + + L+DMYA   ++  A  VFD +
Sbjct: 122 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 181

Query: 74  LE--RNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVE 130
            +  + +  W A++CG+ Q G  +  L LF +M   +   P E T+++ + A     +  
Sbjct: 182 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA 241

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
               +HG  +K G   N  V N+++DMY++ G+ + A R+F ++    +++WN +I G V
Sbjct: 242 GKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCV 301

Query: 191 LAGYSDKGLLLFRKMQ---EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           + G+      L R+MQ   E G +P+  T  + L  C  L +   G +IHG+ +      
Sbjct: 302 VQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT 361

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-R 306
            V   +  +LVD Y KCGCL  +R VFD + +++ I+W+ LI+ Y       EA  LF R
Sbjct: 362 DV--AVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 419

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLK 364
                  + +     + +   +   +V++G Q+  +A +   G++ +  +   +VD+  +
Sbjct: 420 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLF-HAMERDHGVEPTPDILACVVDILGR 478

Query: 365 CGLIDEATELFNEMPV--KNVVTWTVII 390
            G +DEA  +   M    + V  W+ ++
Sbjct: 479 AGRLDEAYAMVTSMEAGEQQVSAWSTML 506



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 163/366 (44%), Gaps = 25/366 (6%)

Query: 215 FTFTSTLKACGSLGSVGG----GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           FT  S L+A   L +       G + H F + +G  +  +     +L+  Y + G + +A
Sbjct: 11  FTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADA 70

Query: 271 RRVF--DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +R+F      +  V++W++++    Q     EA++    +    ++ DG   +S +   +
Sbjct: 71  QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 130

Query: 329 DFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVT 385
              L++ G+++HAY  K      ++ V++++VDMY     + +A ++F+ +P   K +  
Sbjct: 131 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 190

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           W  +I GY + G+ +EA+ LF +M  +    P      +VL AC+ S      +     +
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 250

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL-- 502
                   R    + ++D   R G+ D A+ +  +M   P +  W TL++ C V G +  
Sbjct: 251 VKRGMAGNRFVQ-NALMDMYARLGKTDVARRIF-AMVDLPDVVSWNTLITGCVVQGHVAD 308

Query: 503 --ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
             +L RE+ +  L   G  P    +M+ +         C  L   AR K +   A R  +
Sbjct: 309 AFQLAREMQQ--LEEGGVVPNAITLMTLLPG-------CAILAAPARGKEIHGYAVRHAL 359

Query: 561 EVDKEI 566
           + D  +
Sbjct: 360 DTDVAV 365


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/574 (36%), Positives = 336/574 (58%), Gaps = 8/574 (1%)

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           I A     S+++   IH     S F  +  + NS+I +Y KCG + +A R+FD MPA+ +
Sbjct: 71  ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
            +W ++IAGY      D+ L L   M      P+ FTF S LKA G+  S G G QIH  
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA- 189

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            +T  + +     +  +L+D Y +CG +  A  VFD +E K+ +SW++LI G+A++ +  
Sbjct: 190 -LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
             + +F +++    +   F  SS+    A    +EQGK +HA+  K    L   V N+I+
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY K G + +A ++F+ +  K+VVTW  ++T + ++GL +EAV  F +M    V  + +
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            +L++L+ACSH GLV+E ++YF  +  +  ++P I+HY  +VD LGRAG L++A   I  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP+KP+ A+W  LL +CR+H + ++G+   + +  LD D+    V++ NI+A  G W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            R+RK+ ++ G+KK    SWVE++  +H F   DDTHP +E+I++   E+  ++++  G+
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA-GY 546

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V    Y L  + E+ ++  L+ HSEK+A+  AL+    N   G  IR+ KN+R+CGDCH 
Sbjct: 547 VPNTDYVLLHVDEQERQAKLQYHSEKIALAFALI----NMPLGATIRIMKNIRICGDCHS 602

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
             + +SK+ K   VVRD  RFH F  G CSCGDY
Sbjct: 603 AFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 226/419 (53%), Gaps = 6/419 (1%)

Query: 1   MNRVSFSLVSERQRLADSL-RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
           ++ V    ++   RL  SL   C++   LD    +H  L    F+  + L+N LI +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CG +  A  VFD M  R++ SWT+L+ G+ QN      L L   M     KPN FT ++ 
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           +KA+G  +S   G QIH + +K  +  +  VG++++DMY++CGR++ A  +FD + +K+ 
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNG 231

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNA+IAG+   G  +  LL+F +MQ +G     FT++S   A   +G++  G  +H  
Sbjct: 232 VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAH 291

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I SG    +   +  +++D Y K G +++AR+VFD +++K V++W+S++  +AQ     
Sbjct: 292 MIKSG--ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR 349

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+  F ++R+  + ++     S++   +   LV++GKQ      +     +     ++V
Sbjct: 350 EAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVV 409

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           D+  + GL+++A     +MP+K     W  ++     H  AK  +G F    + +++PD
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPD 466



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 8/196 (4%)

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R L     +  S++   A +  ++  + IHA+ A         + NS++ +Y KCG + +
Sbjct: 58  RELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVAD 117

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-- 428
           A  +F+ MP +++ +WT +I GY ++ +  EA+GL   ML    +P+G  + ++L A   
Sbjct: 118 ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGA 177

Query: 429 -SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            + SG+ E+       L         +   S ++D   R GR+D A  + + +  K  ++
Sbjct: 178 SASSGIGEQ----IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS 233

Query: 488 IWQTLLSACRVHGDLE 503
            W  L++     GD E
Sbjct: 234 -WNALIAGFARKGDGE 248


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/592 (35%), Positives = 342/592 (57%), Gaps = 8/592 (1%)

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
            + S  + P        I A     ++++  +IHG    S FE +  + NS+I +Y KCG
Sbjct: 41  HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCG 100

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            + EA ++FD M  K +++W ++IAGY       + + L   M +    P+ FTF S LK
Sbjct: 101 SVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           A G+    G G QIH   +   +   V   +  +L+D Y +CG +  A  VFD ++ K+ 
Sbjct: 161 AAGAYADSGIGGQIHALAVKCDWHEDV--YVGSALLDMYARCGKMDMATAVFDKLDSKNG 218

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +SW++LI G+A++ +   A+ +F +++    +   F  SS+    A    +EQGK +HA+
Sbjct: 219 VSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAH 278

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
             K    L   V N+++DMY K G + +A ++F  +  K++VTW  ++T + ++GL KEA
Sbjct: 279 MVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEA 338

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           V  F +M    +  + + +L +L+ACSH GLV+E + YF  +  +  ++P IEHY  +VD
Sbjct: 339 VSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVD 397

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
            LGRAG L+ A   I  MP++P+ A+W  LL+ACR+H + ++G+   + + +LD D+   
Sbjct: 398 LLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGP 457

Query: 523 YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
            V++ NI+A  G W+   R+RK+ ++ G+KK    SWVE+   +H F   DDTHP  E+I
Sbjct: 458 PVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEI 517

Query: 583 HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
           +++  E+  ++++E G+V  + Y L  + E+ +E +L+ HSEK+A+  AL++       G
Sbjct: 518 YKMWDEISMKIRKE-GYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQ----MPAG 572

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IR+ KN+R+CGDCH   K +SK+ +   VVRD  RFH F  G CSCGDYW
Sbjct: 573 ATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 218/402 (54%), Gaps = 9/402 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+++  LD   ++HG L    F  D  L+N LI +Y KCG +  A  VFDKM ++++
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+L+ G+ QN      + L   M     KPN FT ++ +KA+G  +    G QIH +
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K  +  +  VG++++DMY++CG+++ A  +FD + +K+ ++WNA+I+G+   G  +  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L++F +MQ +G     FT++S       +G++  G  +H  ++ S     +   +  +++
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKS--RQKLTAFVGNTML 295

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G +++AR+VF+ +  K +++W+S++  +AQ     EA+  F ++R+  + ++  
Sbjct: 296 DMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   +   LV++GK  H +       L+  + +  ++VD+  + GL++ A     
Sbjct: 356 TFLCILTACSHGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +MP++     W  ++     H  AK  VG F    +  ++PD
Sbjct: 414 KMPMEPTAAVWGALLAACRMHKNAK--VGQFAADHVFQLDPD 453


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/695 (32%), Positives = 374/695 (53%), Gaps = 40/695 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDM--YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H   +KMG S D +    +I      + G+M  A  VFD + +  +  W  ++ G+ +
Sbjct: 25  QIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSR 84

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
             + +  +S++  M +S++KP+ FT    +K      +++ G  +    +K GF+ N  V
Sbjct: 85  INHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFV 144

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             + I M+S C  ++ A ++FD+  A  ++TWN M++GY       K  +LF +M++ G 
Sbjct: 145 QKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGV 204

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+  T    L AC  L  + GG  I+ ++  +G       ++   L+D +  CG + EA
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYI--NGGIVERNLILENVLIDMFAACGEMDEA 262

Query: 271 RRVFDLIEQKSVISWSSLILGYA-------------------------------QEENLA 299
           + VFD ++ + VISW+S++ G+A                               +     
Sbjct: 263 QSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFI 322

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+ LFR+++  +++ D F + S++   A    +E G+ +  Y  K     DT V N+++
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY KCG + +A ++F EM  K+  TWT +I G   +G  +EA+ +F  M+   + PD +
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            Y+ VL AC+H+G+VE+ Q +F  +     +KP + HY C+VD LGRAGRL+EA  +I +
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MPVKP+  +W +LL ACRVH +++L     + +L L+ +N   YV++ NI+A    W   
Sbjct: 503 MPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            ++RKL   +G+KK  G S +E++  ++ F  GD +HP +++I+  L  M + + +  G+
Sbjct: 563 RQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKA-GY 621

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
                    D+ EE KE +L  HSEKLAI  AL+  G    PG  IR+ KNLR+C DCH 
Sbjct: 622 SPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSG----PGITIRIVKNLRMCVDCHH 677

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +S+      +VRD TRFH F  G CSC ++W
Sbjct: 678 MAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 204/441 (46%), Gaps = 39/441 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+  ++N+ L YG  L    VK GF  +L +    I M++ C  ++ A  VFD      V
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEV 173

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W  ++ G+ +    K    LF +M    V PN  TL   + A   L  +E G  I+  
Sbjct: 174 VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKY 233

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM------------------------ 174
                 E N ++ N +IDM++ CG ++EA  +FD M                        
Sbjct: 234 INGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLA 293

Query: 175 -------PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
                  P +  ++W AMI GY+      + L LFR+MQ     PDEFT  S L AC  L
Sbjct: 294 RKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHL 353

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G++  G  +  ++  +       T +  +L+D Y KCG + +A++VF  +  K   +W++
Sbjct: 354 GALELGEWVKTYIDKNSIKND--TFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTA 411

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I+G A   +  EA+ +F  + E S+  D      ++       +VE+G+     +  + 
Sbjct: 412 MIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFI-SMTMQ 470

Query: 348 SGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVG 404
            G+  +V++   +VD+  + G ++EA E+   MPVK N + W  ++     H   + A  
Sbjct: 471 HGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEM 530

Query: 405 LFRKMLLDDVEPDGVAYLAVL 425
             +++L  ++EP+  A   +L
Sbjct: 531 AAKQIL--ELEPENGAVYVLL 549


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 378/699 (54%), Gaps = 23/699 (3%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+  R      L  C  +  L     +H  + ++GF  D+++   L+ MY +CG ++ + 
Sbjct: 233 LLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESI 292

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           AVF+ M  RN VSW A++  F Q G+  A  +++ +M     +PN+ T  T +KA+   S
Sbjct: 293 AVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSS 352

Query: 128 SVENG--MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           S + G    +HG    +G E + +VG +++ MY   G I+ A   FD +PAK++++WNAM
Sbjct: 353 SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 412

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +  Y   G + + + LF  M+     P++ ++ + L  C     V     IH  ++ +G 
Sbjct: 413 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGL 469

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            ++ ++ IA  +V  + + G L EA   FD    K  +SW++ +   +  E+L  A+  F
Sbjct: 470 -FAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAF 528

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA-YAAKVPSGLDTSVSNSIVDMYLK 364
             ++    + D F L S++ V AD   +E G+ I    +A +    D  V++++++M  K
Sbjct: 529 YTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAK 588

Query: 365 CGL-IDEATELFNEMP--VKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVA 420
           CG  +DE   LF  MP   K++V W  +I  Y +HG  ++A+ LFR M     V PD   
Sbjct: 589 CGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSST 648

Query: 421 YLAVLSACSHSGLVEESQEYF--SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           +++VLS CSH+GLVE+    F  +R       +P +EHY+C+VD LGR G L EA++ I 
Sbjct: 649 FVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP-VEHYACLVDVLGRMGYLREAEDFIR 707

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
            MP+     +W +LL AC  +GDLE G       + L   + V YV++SNI+A AG W +
Sbjct: 708 KMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWED 767

Query: 539 CERLRK-LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
             R+R+ +A  +  K+V G+S + V   +H F+  D +HP ++ I+  L E  K +  E 
Sbjct: 768 SIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAEL-ERLKGLIREA 826

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGD 656
           G+V   +  LHD++EE KE+ L  HSEKLAI       GL   P +  IRV KNLRVC D
Sbjct: 827 GYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAF-----GLISVPHRHSIRVIKNLRVCKD 881

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRF-EGGVCSCGDYW 694
           CH   K ++++ +    VRD  RFH F + G CSCGDYW
Sbjct: 882 CHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 257/543 (47%), Gaps = 32/543 (5%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + LA  LR C  +  L  G QLH  +VK G + + +L N L+ MY+KC  ++ A A F  
Sbjct: 25  ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMG---SSSVKPNEFTLSTNIK--ASG--- 124
           +  R + +W  L+       +  A   L+ +M     +  +PN+ T+   +   ASG   
Sbjct: 85  LRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPS 141

Query: 125 -----VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
                   S+     +H     S  E +  V  +++D Y KCG +  A  +F  +    L
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDL 201

Query: 180 ITWNAMIAGYVLAG---YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           I WNA I     AG     D+ LLL R+M   G +P+  +F + L +CG   S+     I
Sbjct: 202 ICWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSI 259

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  +   GF   V  V+A +LV  Y +CG + E+  VF+ +  ++ +SW+++I  +AQ  
Sbjct: 260 HARVEELGFLGDV--VVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 317

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ--IHAYAAKVPSGLDTSV 354
           + + A  ++ ++++   + +     + +      +  + G+   +H + A      D  V
Sbjct: 318 HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV 377

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             ++V MY   G ID A   F+ +P KN+V+W  ++T YG +G A+EA+ LF  M    +
Sbjct: 378 GTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSL 437

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            P+ V+YLAVL  C     V E++   + +  +          + +V    R+G L+EA 
Sbjct: 438 APNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAV 494

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS--NIHAD 532
              ++  VK S++ W T ++A     DL  G       ++ +G  P  + ++S  ++ AD
Sbjct: 495 AAFDATVVKDSVS-WNTKVAALSAREDLH-GAITAFYTMQHEGFRPDKFTLVSVVDVCAD 552

Query: 533 AGS 535
            G+
Sbjct: 553 LGT 555



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 225/463 (48%), Gaps = 15/463 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW-TALMCGFLQNGNAKACLSLFCQM 104
           DL +   L+D Y KCG +  A  VF ++   +++ W  A+M     +      L L  +M
Sbjct: 169 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 228

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               + PN  +    + + G  SS+     IH    + GF  + VV  +++ MY +CG +
Sbjct: 229 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 288

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           +E+  +F+ M  ++ ++WNAMIA +   G+      ++ +MQ+ G  P++ TF + LKA 
Sbjct: 289 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 348

Query: 225 GSLGS--VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            S  S  +G    +HG++  +G    V  ++  +LV  Y   G +  AR  FD I  K++
Sbjct: 349 CSSSSQDLGESAALHGWIACAGLEGDV--MVGTALVTMYGSTGAIDRARAAFDAIPAKNI 406

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +SW++++  Y       EAMELF  ++ +SL  +     +++G   D   V + + IHA 
Sbjct: 407 VSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAE 463

Query: 343 AAKVPSGL---DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
              V +GL   ++S++N +V M+ + G ++EA   F+   VK+ V+W   +         
Sbjct: 464 V--VGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDL 521

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
             A+  F  M  +   PD    ++V+  C+  G +E  +    +L     ++  +   S 
Sbjct: 522 HGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASA 581

Query: 460 IVDSLGRAG-RLDEAKNLIESMP-VKPSIAIWQTLLSACRVHG 500
           +++ + + G  +DE + L   MP  +  +  W T+++A   HG
Sbjct: 582 VMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 624


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/664 (34%), Positives = 362/664 (54%), Gaps = 15/664 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH   V  G++ D  + + L  +Y     ++ A  VFD +   + V W  L+ G   +  
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEA 195

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            ++   + C     SV+P+  TL++ + A+  ++ V  G  +H    K G   +  V   
Sbjct: 196 VESFARMVCD---GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +I +YSKCG +  A  +FD+M    L+ +NA+I+GY + G     + LF ++   G  P+
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  + +      G       +HGF++ SGF  +  + ++ ++   + +   +  AR+ 
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGF--TANSPVSTAITTLHCRLNDMESARKA 370

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           FD + +K++ SW+++I GYAQ      A+ LF Q+ + +++ +   +SS +   A    +
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
             GK +H    +     +  V  +++DMY KCG I EA  +FN M  KNVV+W  +I GY
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
           G HG   EA+ L++ ML   + P    +L+VL ACSH GLVEE  + F  + +D  + P 
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPG 550

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGE 510
           IEH +C+VD LGRAG+L EA  LI   P   V P   +W  LL AC VH D +L +   +
Sbjct: 551 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP--GVWGALLGACMVHKDSDLAKLASQ 608

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  LD +N   YV++SN+H     ++E   +R+ A+S+ L K  G + +E+  + H F 
Sbjct: 609 KLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFM 668

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD  HP +E I+  L ++  +M E  G+    + AL+D++EE KE  ++VHSEKLAI  
Sbjct: 669 AGDRAHPQSEAIYSYLEKLTAKMIEA-GYRPETEAALYDVEEEEKEHMVKVHSEKLAIAF 727

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L    L+ +PG  IR+ KNLRVC DCH   K +SK+ + + VVRDA+RFH F  GVCSC
Sbjct: 728 GL----LSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSC 783

Query: 691 GDYW 694
           GDYW
Sbjct: 784 GDYW 787



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 197/461 (42%), Gaps = 63/461 (13%)

Query: 127 SSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNA 184
           S++ +  QI  + + SG +  +P    S++  Y+          R+F   P       NA
Sbjct: 29  STLRHLDQILAVSLASGHYPLDPAPATSLLLRYASLRAPTGHLLRLFRGFPRPDRFLRNA 88

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-------GSVGGGTQIH 237
           ++        S +  LLF         PD F+F     +  +L        S      +H
Sbjct: 89  LLRSLP----SLRPRLLF-------PCPDSFSFAFAATSLAALCSRGGGAASSSAARALH 137

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
              + +G  Y+  T +A +L   Y     +  AR+VFD +     + W++L+ G +    
Sbjct: 138 ALAVAAG--YAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG--- 192

Query: 298 LAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
            +EA+E F R + + S++ D   L+S++   A+ A V  G+ +H++A K        V  
Sbjct: 193 -SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
            ++ +Y KCG ++ A  LF+ M   ++V +  +I+GY  +G+   +V LF +++   + P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311

Query: 417 DGVAYLA-----------VLSACSH-----SGLVEESQEYF--------------SRLCN 446
           +    +A           +L+ C H     SG    S                  +R   
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLE 503
           D   +  +E ++ ++    + G  + A  L E M    V+P+     + LSAC   G L 
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431

Query: 504 LGREVGEILLRLDGDNPVNYVMMS--NIHADAGSWNECERL 542
           LG+ +  I+   D + P  YVM +  +++A  GS +E  R+
Sbjct: 432 LGKWLHRIITEEDLE-PNVYVMTALIDMYAKCGSISEARRI 471



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L  C++   L  G  LH  + +     ++ +   LIDMYAKCG ++ A  +F+ M 
Sbjct: 417 ISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD 476

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSW A++ G+  +G     L L+  M  + + P   T  + + A      VE G +
Sbjct: 477 NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWK 536

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLI---TWNAMIAGY 189
           +    M   +  NP + +   ++D+  + G++ EA  +    P KS +    W A++   
Sbjct: 537 VF-RSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFP-KSAVGPGVWGALLGAC 594

Query: 190 VLAGYSDKGLLLFRKMQE 207
           ++   SD   L  +K+ E
Sbjct: 595 MVHKDSDLAKLASQKLFE 612


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/637 (33%), Positives = 352/637 (55%), Gaps = 43/637 (6%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           Q    K  L +  Q+     KP+    ST I++      ++ G ++H     SGF     
Sbjct: 51  QQNRLKEALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLF 106

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + N +++MY+KC  + ++ ++FD MP + L +WN +I+GY   G   +   LF KM E  
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD 166

Query: 210 EI--------------PDE------------------FTFTSTLKACGSLGSVGGGTQIH 237
                           P+E                  FT +S L A  ++  +  G +IH
Sbjct: 167 NFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIH 226

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G+++ +G       V+  +L D Y KCG + EAR +FD +  + +++W+++I  Y Q+  
Sbjct: 227 GYIMRTGL--DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             E  +LF  L    ++ + F  S ++   A+    E GK++H Y  +V     +  +++
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +V MY KCG +  A  +F E P  ++ +WT +I GY ++G   EA+  F  ++    +PD
Sbjct: 345 LVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPD 404

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ VLSAC+H+GLV++  +YF  +     +    +HY+CI+D L R+G+ DEA+N+I
Sbjct: 405 HITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENII 464

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             M +KP   +W +LL  CR+HG+L+L +   E L  ++ +NP  YV ++NI+A AG W+
Sbjct: 465 SKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWS 524

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E  ++RK    +G+ K  G SW+ + +++H F  GDD+HP +++I++ L ++ KRMKEE 
Sbjct: 525 EVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEE- 583

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV    + LHD+++E KE++L  HSEKLA+   ++    +   G  I+VFKNLR C DC
Sbjct: 584 GFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGII----STPEGTPIKVFKNLRTCVDC 639

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  IK +SKI     +VRD+ RFH FE G CSC DYW
Sbjct: 640 HTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/459 (31%), Positives = 229/459 (49%), Gaps = 51/459 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------------------ 60
           ++ C K+ LL  G ++H  +   GF   L + N L++MYAKC                  
Sbjct: 77  IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDL 136

Query: 61  -------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-S 106
                        G +  A ++FDKM ER+  SWTA++ G++++      L LF  M  S
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRS 196

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            + K N+FT+S+ + A+  +  +  G +IHG  M++G + + VV +++ DMY KCG I E
Sbjct: 197 DNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 256

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD M  + ++TW AMI  Y   G   +G  LF  +   G  P+EFTF+  L AC +
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316

Query: 227 LGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
             S   G ++HG++   GF P+S     A +LV  Y KCG +V A RVF    Q  + SW
Sbjct: 317 QTSEELGKKVHGYMTRVGFDPFSFA---ASALVHMYSKCGNMVSAERVFKETPQPDLFSW 373

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +SLI GYAQ     EA+  F  L +   Q D      ++   A   LV++G   + ++ K
Sbjct: 374 TSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLD-YFHSIK 432

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG---LA 399
              GL  +  +   I+D+  + G  DEA  + ++M +K +   W  ++ G   HG   LA
Sbjct: 433 EQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLA 492

Query: 400 KEAV-GLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEE 436
           + A   LF      ++EP+  A Y+ + +  + +G+  E
Sbjct: 493 QRAAEALF------EIEPENPATYVTLANIYATAGMWSE 525


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 335/568 (58%), Gaps = 3/568 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           ++ G  +H  +V  GF+    ++  L++MYAK  E+  +  VF+ M E NVVSW A++ G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F  N        LF +M    V P+  T     KA G+L  V    ++ G  ++ G + N
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306

Query: 148 PVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +VG ++IDM SKCG + EA  +F+   +  +    WNAMI+GY+ +G+++K L LF KM
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            ++    D +T+ S   A  +L  +  G ++H   I SG   +  + I+ ++ + Y KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS-ISNAVANAYAKCG 425

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L + R+VF+ +E + +ISW+SL+  Y+Q     +A+E+F  +R   +  + F  SS++ 
Sbjct: 426 SLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLV 485

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A+  L+E G+Q+H    KV   +D  + +++VDMY KCG + +A ++FN +   + V+
Sbjct: 486 SCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT II G+ +HG+  +A+ LFR+M+   VEP+ V +L VL ACSH GLVEE  +YF  + 
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               + P +EHY+CIVD L R G L++A   I  MPV+P+  +WQTLL ACRVHG++ELG
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG 665

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               + +L    +N   YV++SN + ++GS+ +   LR L + +G+KK  G SW+ V+  
Sbjct: 666 ELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGT 725

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           +H FY GD  HP  +KI+  L E++ ++
Sbjct: 726 LHKFYAGDQQHPEKDKIYAKLEELKLKL 753



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 254/496 (51%), Gaps = 15/496 (3%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFS--FDLMLNNDLIDMYAKCGEMNGACAVF 70
           Q L D LR C     L     +HG L+K  FS    L+L N +   Y+KC +++ AC +F
Sbjct: 69  QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M +RN  SWT L+ G  +NG        FC+M S  + P++F  S  ++    L S+E
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  +H   +  GF  +  V  ++++MY+K   I ++ ++F+ M   ++++WNAMI G+ 
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                     LF +M   G  PD  TF    KA G L  V    ++ G+ +  G      
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV--DSN 306

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           T++  +L+D   KCG L EAR +F+   I  +    W+++I GY +     +A+ELF ++
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD---TSVSNSIVDMYLKC 365
            +  + +D +   S+    A    +  GK++HA A K  SGL+    S+SN++ + Y KC
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIK--SGLEVNYVSISNAVANAYAKC 424

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +++  ++FN M  +++++WT ++T Y +     +A+ +F  M  + + P+   + +VL
Sbjct: 425 GSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVL 484

Query: 426 SACSHSGLVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            +C++  L+E  Q+    +C     M   IE  S +VD   + G L +AK +   +    
Sbjct: 485 VSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 485 SIAIWQTLLSACRVHG 500
           +++ W  +++    HG
Sbjct: 543 TVS-WTAIIAGHAQHG 557



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 4/190 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   LL+YG Q+HG + K+G   D  + + L+DMYAKCG +  A  VF+++   + 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G  Q+G     L LF +M    V+PN  T    + A      VE G+Q   +
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYS 195
            MK  +   P + +   I+D+ S+ G +N+A      MP + + + W  ++    + G  
Sbjct: 604 -MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV 662

Query: 196 DKGLLLFRKM 205
           + G L  +K+
Sbjct: 663 ELGELAAQKI 672


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/708 (33%), Positives = 384/708 (54%), Gaps = 54/708 (7%)

Query: 34   LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
            LH   VK G    L   N L+ +Y K   M+ A  +FD++ +RN  +WT L+ GF + G+
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 94   AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            ++    LF +M +    PN++TLS+  K   +  +++ G  +H   +++G + + V+GNS
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 154  IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK--------- 204
            I+D+Y KC     A R+F++M    +++WN MI+ Y+ AG  +K L +FR+         
Sbjct: 431  ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 205  ----------------------MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
                                  M E G      TF+  L    SL  V  G Q+HG ++ 
Sbjct: 491  NTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLK 550

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-----DLIE-----------QKSVISWS 286
             GF       I  SLV+ Y KCG +  A  V      D ++           +  ++SW 
Sbjct: 551  FGF--CRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWG 608

Query: 287  SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
             ++ GY       + ++ FR +    + VD   +++++   A+  ++E G+ +HAY  K+
Sbjct: 609  LMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKI 668

Query: 347  PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +D  V +S++DMY K G +D+A  +F +    N+V WT +I+G   HG  K+A+ LF
Sbjct: 669  GHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLF 728

Query: 407  RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
             +ML   + P+ V +L VL+AC H+GL+EE   YF  + +   + P +EH + +VD  GR
Sbjct: 729  EEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 467  AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            AG L E KN I    +    ++W++ LS+CR+H ++E+G+ V E+LL++   +P  YV++
Sbjct: 789  AGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848

Query: 527  SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
            SN+ A    W+E  R+R L   +G+KK  G+SW+++  +IH F  GD +HP  E+I+  L
Sbjct: 849  SNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYL 908

Query: 587  MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
              +  R+K E+G+ + VK  + D++EE  E  +  HSEKLA+   ++    N  P   IR
Sbjct: 909  DILIGRLK-EIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTA-NRTP---IR 963

Query: 647  VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + KNLR+C DCH FIK  S++L    ++RD  RFH F+ G CSCGDYW
Sbjct: 964  IIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 217/427 (50%), Gaps = 59/427 (13%)

Query: 127 SSVENGM----QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S++ NG      +H + +K+G        N ++ +Y K   ++ A ++FD +P ++  TW
Sbjct: 299 STISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTW 358

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
             +I+G+  AG S+    LFR+M+  G  P+++T +S  K C    ++  G  +H +++ 
Sbjct: 359 TILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLR 418

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           +G    V  V+  S++D Y+KC     A RVF+L+ +  V+SW+ +I  Y +  ++ +++
Sbjct: 419 NGIDADV--VLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSL 476

Query: 303 ELFRQLRERSLQ-----VDGFV-----------LSSMMGVFADFAL-------------- 332
           ++FR+L  + +      VDG +           L  M+    +F++              
Sbjct: 477 DMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLS 536

Query: 333 -VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP---VKN------ 382
            VE G+Q+H    K     D  + +S+V+MY KCG +D A+ +  ++P   +KN      
Sbjct: 537 LVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVT 596

Query: 383 -------VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
                  +V+W ++++GY  +G  ++ +  FR M+ + V  D      ++SAC+++G++E
Sbjct: 597 CKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILE 656

Query: 436 ESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
             +   +    + ++  RI+ Y  S ++D   ++G LD+A  +      +P+I  W +++
Sbjct: 657 FGRHVHAY---NHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTN-EPNIVFWTSMI 712

Query: 494 SACRVHG 500
           S C +HG
Sbjct: 713 SGCALHG 719



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 213/474 (44%), Gaps = 56/474 (11%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+   +CCS ++ L  G  +H  +++ G   D++L N ++D+Y KC     A  VF+ M 
Sbjct: 393 LSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMN 452

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP----------------------- 111
           E +VVSW  ++  +L+ G+ +  L +F ++    V                         
Sbjct: 453 EGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYC 512

Query: 112 -----NEFTLST---NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                 EF++ T    +  S  LS VE G Q+HGM +K GF  +  + +S+++MY KCGR
Sbjct: 513 MVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGR 572

Query: 164 INEAARMFDVMP----------------AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           ++ A+ +   +P                   +++W  M++GYV  G  + GL  FR M  
Sbjct: 573 MDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVR 632

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              + D  T T+ + AC + G +  G  +H +    G  + +   +  SL+D Y K G L
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIG--HRIDAYVGSSLIDMYSKSGSL 690

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +A  +F    + +++ W+S+I G A      +A+ LF ++  + +  +      ++   
Sbjct: 691 DDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNAC 750

Query: 328 ADFALVEQG---KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
               L+E+G    ++   A  +  G++     S+VD+Y + G + E      E  + ++ 
Sbjct: 751 CHAGLLEEGCRYFRMMKDAYCINPGVEH--CTSMVDLYGRAGHLTETKNFIFENGISHLT 808

Query: 385 T-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           + W   ++    H    E      +MLL     D  AY+ + + C+ +   +E+
Sbjct: 809 SVWKSFLSSCRLHK-NVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEA 861


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/657 (34%), Positives = 357/657 (54%), Gaps = 9/657 (1%)

Query: 40  KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLS 99
           ++G+  +  L N LID+Y KC   + A AVF  +  +NV SWT ++  F +N +   C  
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
            F  M    + P E  +S  + A      +  G  I    + +G E   +V  +++ +Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           K G   +AA +F  M  + ++ W+AM+A Y   G+  + L LFR+M   G  P++ T  S
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            L AC SLG +  G  +H  +   G    V  V+  +LV+ Y KCG +  A   F  I +
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGV--VVGTALVNLYGKCGRIEAAAEAFGQIVE 240

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
           K+V++WS++   YA+ +   +A+ +  ++    L  +     S++   A  A ++QG++I
Sbjct: 241 KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRI 300

Query: 340 HAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           H     +  GL  D  V  ++V+MY KCG +  A  +F+++   ++V W  +I    +HG
Sbjct: 301 HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHG 360

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             ++A+ LF +M L+ ++P  + + +VL ACSH+G++++ +++F     D  + P  EH+
Sbjct: 361 QTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHF 420

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
            C+VD LGRAG + ++++L+  MP +P    W   L ACR + +++      E L +LD 
Sbjct: 421 GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDP 480

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
                YV++SN++A AG W++  R+R+  +     K AGRSW+EV   +H F  GD  HP
Sbjct: 481 RKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHP 540

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
              +IH  L  + K MK   G+V   +  LHD+++E KE  +  HSEKLA+  AL    L
Sbjct: 541 RIGEIHAELQRLTKLMKAA-GYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFAL----L 595

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
               G  IRV KNLRVC DCH   K +SK++    VVRD  RFHRF+ G CSCGDYW
Sbjct: 596 TTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 15/336 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L  G  +H  +   G    +++   L+++Y KCG +  A   F +++
Sbjct: 180 LVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIV 239

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NVV+W+A+   + +N   +  + +  +M    + PN  T  + + A   +++++ G +
Sbjct: 240 EKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRR 299

Query: 135 IHGM--CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           IH     +  G E +  V  ++++MYSKCG +  A  MFD +    L+ WN++IA     
Sbjct: 300 IHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQH 359

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSG-FPYSVK 250
           G ++K L LF +M+  G  P   TFTS L AC   G +  G +    F+   G FP +  
Sbjct: 360 GQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEH 419

Query: 251 TVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI---LGYAQEENLAEAMELFR 306
               G +VD   + G +V++   +  +  +   ++W + +     Y   +    A E   
Sbjct: 420 F---GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLF 476

Query: 307 QLRERSLQVDGFVLSSM---MGVFADFALVEQGKQI 339
           QL  R  +    +LS+M    G ++D A + Q  Q+
Sbjct: 477 QLDPRK-RAPYVLLSNMYAKAGRWSDVARMRQAMQL 511


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/654 (35%), Positives = 358/654 (54%), Gaps = 21/654 (3%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           S +L L   +I  Y +   +  A  +FD+M  R+VVSW +++ G L  GN      LF +
Sbjct: 40  SPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDE 99

Query: 104 MGSSSVKPNEFTLSTNIKASGVLS--SVENGMQIH-GMCMKSGFEWNPVVGNSIIDMYSK 160
           M      P +  +S     +G L    VE   ++   M +K    WN +V       Y +
Sbjct: 100 M------PEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHG-----YFE 148

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
            GR+ E  R+F+ MP + +I+W +MI G  L G S++ L +F+KM   G  P   TF   
Sbjct: 149 NGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACV 208

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L AC +      G Q+HG ++  G  +     I+ SL+ FY  C  +  A ++F+    K
Sbjct: 209 LSACANAVEFNLGVQVHGHVVKLGCFF--HEFISVSLITFYANCMKIEHAHKIFNETLTK 266

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
           +V+ W++L+  Y       +A+ +F  + +     +    S  +        +++GK+IH
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIH 326

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
             A K+    D  V NS+V MY +CG ++ A  +F  +  K++V+W  II G  +HG   
Sbjct: 327 TMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGL 386

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
            A+  F +M+   V+P+ + +  +LSACS SG++ + + +F  +   K    R +HY+C+
Sbjct: 387 WALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACM 446

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           VD LGR G+LDEA+ L+  MPVK +  IW  LLSACRVH +LE+     + +L L+ +  
Sbjct: 447 VDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCS 506

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             YV++SNI+A AG W +  R+R   +  GL K  G SWV +  + H F   D +HPL+E
Sbjct: 507 SAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSE 566

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           +I++ L  + K++K E G+V   K+ALHD+++E KEE L  HSE+LAI   LV    +  
Sbjct: 567 RIYEKLDWLGKKLK-EFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLV----STV 621

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            G  I V KNLRVCGDCH  IK +SKI+    VVRD+ RFH F+ G+CSC DYW
Sbjct: 622 EGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 4/285 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+  +  + GVQ+HG +VK+G  F   ++  LI  YA C ++  A  +F++ L +NV
Sbjct: 209 LSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNV 268

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V WTAL+  ++ N   +  L +F  M      PN+ T S  +KA   L +++ G +IH M
Sbjct: 269 VKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTM 328

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E +  VGNS++ MY++CG +N A  +F  +  K +++WN++I G    G+    
Sbjct: 329 AIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWA 388

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV-KTVIAGSL 257
           L+ F +M   G  P+E TFT  L AC   G +  G     F   S +  +V +      +
Sbjct: 389 LIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCF--FEYISRYKSNVLRPQHYACM 446

Query: 258 VDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEA 301
           VD   +CG L EA  +   +  K+  + W +L+       NL  A
Sbjct: 447 VDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVA 491



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 43/301 (14%)

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           K  R+++A  +FD +P+ +L  +  MIAGY         L LF +M     + D  ++ S
Sbjct: 24  KNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMS----VRDVVSWNS 79

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIE 278
            +K C   G++G  T++   +         K VI+  ++V+ Y+K G +  A+R+F  + 
Sbjct: 80  MIKGCLDCGNLGMATRLFDEM-------PEKNVISWTTMVNGYLKFGRVELAQRLFLDMH 132

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERS----------LQVDG------FVLSS 322
            K V +W++++ GY +   + E + LF ++  R           L ++G      FV   
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192

Query: 323 MM--GV---FADFALV----------EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           M+  GV   ++ FA V            G Q+H +  K+       +S S++  Y  C  
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMK 252

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I+ A ++FNE   KNVV WT ++T Y  +   ++A+ +F  M      P+   +   L A
Sbjct: 253 IEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312

Query: 428 C 428
           C
Sbjct: 313 C 313



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 20/182 (10%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C     LD G ++H   +K+G   D+ + N L+ MY +CG +N A AVF  + E++
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD 368

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV-ENGMQIH 136
           +VSW +++ G  Q+G     L  F QM    V PNE T       +G+LS+   +GM + 
Sbjct: 369 IVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITF------TGLLSACSRSGMLLK 422

Query: 137 GMCMKSGFEW---------NPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMI 186
           G C    FE+          P     ++D+  +CG+++EA  +   MP K+  + W A++
Sbjct: 423 GRCF---FEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALL 479

Query: 187 AG 188
           + 
Sbjct: 480 SA 481



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 23/188 (12%)

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL-----QVDGFVLS 321
           L +AR +FD I   ++  ++ +I GY + + L +A++LF ++  R +      + G +  
Sbjct: 28  LDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDC 87

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGL------------------DTSVSNSIVDMYL 363
             +G+          K + ++   V   L                  D +  N++V  Y 
Sbjct: 88  GNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYF 147

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           + G ++E   LF EMPV++V++WT +I G   +G ++EA+ +F+KML   VEP    +  
Sbjct: 148 ENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFAC 207

Query: 424 VLSACSHS 431
           VLSAC+++
Sbjct: 208 VLSACANA 215



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 24/189 (12%)

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
            I  Y   +     TS++N     +LK   +D+A  +F+++P  N+  +T +I GY ++ 
Sbjct: 3   HITRYTRTITLSYTTSLAN-----HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRND 57

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
              +A+ LF +M + DV    V++ +++  C   G +  +   F     D+  +  +  +
Sbjct: 58  RLCDALKLFDRMSVRDV----VSWNSMIKGCLDCGNLGMATRLF-----DEMPEKNVISW 108

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR-EVGEILLRLD 516
           + +V+   + GR++ A+ L   M VK  +A W  +     VHG  E GR E G   +RL 
Sbjct: 109 TTMVNGYLKFGRVELAQRLFLDMHVK-DVAAWNAM-----VHGYFENGRVEEG---VRLF 159

Query: 517 GDNPVNYVM 525
            + PV  V+
Sbjct: 160 EEMPVRDVI 168


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 207/580 (35%), Positives = 351/580 (60%), Gaps = 4/580 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC-AVFDKMLERNVVSWTALMCGFL 89
            +QLHG  +K  F  D+++    +DMY KC  ++     +F+ +   N+ S+ A++ G+ 
Sbjct: 230 ALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYA 289

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           ++      L +F  +  S +  +E +LS   +A  V+     G+Q+HG+ MKS  + N  
Sbjct: 290 RSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNIC 349

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V N+I+DMY KCG + EA  +F+ M ++  ++WNA+IA +   G  +K L LF  M + G
Sbjct: 350 VANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 409

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PDEFT+ S LKAC    ++  G +IH  +I S     + + +  +L+D Y KCG + +
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM--GLDSFVGIALIDMYSKCGMMEK 467

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A ++ D + +++V+SW+++I G++ ++   EA + F ++ E  +  D F  ++++   A+
Sbjct: 468 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 527

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              VE GKQIHA   K     D  +S+++VDMY KCG + +   +F + P ++ VTW  +
Sbjct: 528 LVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAM 587

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           + GY +HGL +EA+ +F  M L++V+P+   +LAVL AC H GLVE+   YF  + ++  
Sbjct: 588 VCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYG 647

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P++EHYSC+VD +GR+G++ +A  LIE MP +    IW+TLLS C++HG++E+  +  
Sbjct: 648 LDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAA 707

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             +L+L+ ++   YV++SNI+A+AG WNE  +LRK+ R  GLKK  G SW+E+  E+H F
Sbjct: 708 YSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAF 767

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
             GD  HP +++I++ L  +   MK  +G++    + L+D
Sbjct: 768 LVGDKAHPRSKEIYENLDVLTDEMK-WVGYMPDTDFILND 806



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 269/593 (45%), Gaps = 78/593 (13%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++++  +   + CS    L  G Q H  ++   F   + + N LI MY KC ++  A  V
Sbjct: 40  TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKV 99

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLF-------C--------QMGSSSVKPNEF 114
           FD M +R+ VSW A++ G+   G+      LF       C        +MG      +  
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRT 159

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR----M 170
           T +  +K+   L     G+QIHG+ +K GF+ + V G++++DMY+KC   N+  R    +
Sbjct: 160 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLEL 219

Query: 171 FDVMPA---------------------------------------------KSLITWNAM 185
           F  M                                                SL   N  
Sbjct: 220 FKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQ 279

Query: 186 IAGYVLAGY--SDKG---LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
               ++ GY  SDKG   L +FR +Q+ G   DE + +   +AC  +     G Q+HG  
Sbjct: 280 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLS 339

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           + S    ++   +A +++D Y KCG LVEA  VF+ +  +  +SW+++I  + Q  N  +
Sbjct: 340 MKSLCQSNI--CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 397

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
            + LF  + +  ++ D F   S++   A +  +  G +IH    K   GLD+ V  +++D
Sbjct: 398 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALID 457

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG++++A +L + +  + VV+W  II+G+     ++EA   F KML   V+PD   
Sbjct: 458 MYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 517

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           Y  +L  C++   VE  ++  +++   K ++      S +VD   + G + + + + E  
Sbjct: 518 YATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 576

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHA 531
           P +  +  W  ++     HG   LG E  +I   ++L+   P +   ++ + A
Sbjct: 577 PNRDFVT-WNAMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVLRA 625



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G+++H  ++K     D  +   LIDMY+KCG M  A  + D++ E+ V
Sbjct: 421 LKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV 480

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW A++ GF     ++     F +M    V P+ FT +T +     L +VE G QIH  
Sbjct: 481 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 540

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K   + +  + ++++DMYSKCG + +   +F+  P +  +TWNAM+ GY   G  ++ 
Sbjct: 541 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 600

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSL 257
           L +F  MQ     P+  TF + L+ACG +G V  G    H  L   G    ++      +
Sbjct: 601 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY--SCV 658

Query: 258 VDFYVKCGCLVEARRVFDLIE----QKSVISWSSLI 289
           VD   + G   +  +  +LIE    +   + W +L+
Sbjct: 659 VDIMGRSG---QVSKALELIEGMPFEADAVIWRTLL 691



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 93/174 (53%), Gaps = 2/174 (1%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L  C+  + ++ G Q+H  ++K     D  +++ L+DMY+KCG M     +F+K   
Sbjct: 519 ATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN 578

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ- 134
           R+ V+W A++CG+ Q+G  +  L +F  M   +VKPN  T    ++A G +  VE G+  
Sbjct: 579 RDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 638

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIA 187
            H M    G +      + ++D+  + G++++A  + + MP ++  + W  +++
Sbjct: 639 FHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/674 (34%), Positives = 375/674 (55%), Gaps = 19/674 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G ++H  ++K+ F  D+ + N LI +Y K G    A  VF++M ER++VSW +++ G
Sbjct: 142 LEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISG 201

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +L   +    L LF +M     KP+ F+  + + A   + S   G ++H   ++S  E  
Sbjct: 202 YLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETG 261

Query: 148 PV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            V V  SI+DMYSK G ++ A R+F  +  ++++ WN +I  Y          L F+KM 
Sbjct: 262 DVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMS 321

Query: 207 E-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKC 264
           E +G  PD  T  + L AC  L     G  IHG+ +  GF P+    V+  +L+D Y + 
Sbjct: 322 EQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPH---IVLDTALIDMYGEW 374

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L  A  +FD I +K++ISW+S+I  Y Q      A+ELF++L + SL  D   ++S++
Sbjct: 375 GQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASIL 434

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             +A+   + +G+QIHAY  K   G +T + NS+V MY  CG +++A + FN + +K+VV
Sbjct: 435 PAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVV 494

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  II  Y  HG  + +V LF +M+   V+P+   + ++L+ACS SG+V+E  EYF  +
Sbjct: 495 SWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESM 554

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             +  + P IEHY  ++D +GR G    AK  I  MP  P+  IW +LL+A R H D+ +
Sbjct: 555 KREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITV 614

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
                E + +++ DN   YV++ N++A+A  W +  R++ L  SKG+ + + RS VE   
Sbjct: 615 AEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKS 674

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRM----KEELGFVYGVKYALHDIQEESKEESLR 620
           + H    GD +H  T KI++VL ++  RM    +EE  +V+ V     +   +S+  S R
Sbjct: 675 KTHVLTNGDRSHVETNKIYEVL-DIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSPR 733

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HS +LA    L+    + + G+ + V  N R+C  CHEF++  SK+ +   VV D+  F
Sbjct: 734 RHSVRLATCFGLI----STETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIF 789

Query: 681 HRFEGGVCSCGDYW 694
           H F  G CSCG+YW
Sbjct: 790 HHFSNGRCSCGNYW 803



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 236/449 (52%), Gaps = 16/449 (3%)

Query: 57  YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           +A  G M  A  +FD+M + +   W  ++ GF   G     L L+C+M  S VK + FT 
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
              IK+   +SS+E G +IH M +K  F  +  V NS+I +Y K G   +A ++F+ MP 
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + +++WN+MI+GY+      + L+LF++M + G  PD F+  S L AC  + S   G ++
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H   + S    +   ++  S++D Y K G +  A R+F  I Q+++++W+ LI  YA+  
Sbjct: 250 HCHAVRSRIE-TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNS 308

Query: 297 NLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            + +A   F+++ E++ LQ D   L +++   A    + +G+ IH YA +        + 
Sbjct: 309 RVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLD 364

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
            +++DMY + G +  A  +F+ +  KN+++W  II  Y ++G    A+ LF+K+    + 
Sbjct: 365 TALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLL 424

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLD 471
           PD     ++L A + S  + E ++  + +     +K R    + I++SL       G L+
Sbjct: 425 PDSTTIASILPAYAESLSLSEGRQIHAYI-----VKSRYGSNTIILNSLVHMYAMCGDLE 479

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +A+     + +K  ++ W +++ A  VHG
Sbjct: 480 DARKCFNHVLLKDVVS-WNSIIMAYAVHG 507



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 91/171 (53%), Gaps = 3/171 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL+ +   +A  L   +++L L  G Q+H  +VK  +  + ++ N L+ MYA CG++  A
Sbjct: 422 SLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDA 481

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              F+ +L ++VVSW +++  +  +G  +  + LF +M +S V PN+ T ++ + A  + 
Sbjct: 482 RKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSIS 541

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
             V+ G + +   MK  +  +P + +   ++D+  + G  + A R    MP
Sbjct: 542 GMVDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 6/152 (3%)

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           KV   L+       +  +   GL+++A +LF+EM   +   W V+I G+   GL  EA+ 
Sbjct: 53  KVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQ 112

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC--IVD 462
           L+ +M+   V+ D   Y  V+ + +    +EE ++  + +    +++   + Y C  ++ 
Sbjct: 113 LYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVI---KLRFVSDVYVCNSLIS 169

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              + G   +A+ + E MP +  I  W +++S
Sbjct: 170 LYMKLGCSWDAEKVFEEMPER-DIVSWNSMIS 200


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/752 (31%), Positives = 390/752 (51%), Gaps = 87/752 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLER 76
           + C S NL+  Y  QL   +       D +    LI  Y   G +     +F+   +  R
Sbjct: 57  MYCKSSNLV--YARQLFEEIPNP----DAIARTTLITAYCALGNLELGREIFNGTPLYMR 110

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM-QI 135
           + V + A++ G+  NG+  + L LF  M     +P++FT ++ + A  +    E    Q+
Sbjct: 111 DSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQM 170

Query: 136 HGMCMKSGFEW-NPVVGNSIIDMYSK--------CGRINEAARMFDVMPAKSLIT----- 181
           H   +K+G    +  V N+++ +Y K        C  +  A ++FD MP +  +T     
Sbjct: 171 HCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMI 230

Query: 182 --------------------------WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
                                     WNAMI+GYV  G   + L L RKM+  G   D+ 
Sbjct: 231 TGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDI 290

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGF--PYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           T+T+ + AC ++GS   G Q+H +++ +     +S    ++ +L+  Y K   + EAR++
Sbjct: 291 TYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKI 350

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEA-------------------------------M 302
           F  +  +++I+W++++ GY     + EA                               +
Sbjct: 351 FYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGL 410

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
           +LF+Q+R    +   F  +  +   +    +E G+Q+HA    +      SV N+++ MY
Sbjct: 411 KLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMY 470

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG+++ A  +F  MP  ++V+W  +I   G+HG   +A+ LF +ML + V PD + +L
Sbjct: 471 AKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFL 530

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
            VL+ACSH+GLVE+ + YF+ +     + P  +HY+ +VD   RAG    A+ +I+SMP 
Sbjct: 531 TVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPS 590

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           KP   +W+ LL+ CR+HG+++LG E  E L +L   N   YV++SNI+AD G WNE  ++
Sbjct: 591 KPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKV 650

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
           RKL R + ++K    SW+EV+ ++H F   DD HP    +++ L ++   MK +LG++  
Sbjct: 651 RKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMK-KLGYIPD 709

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
            K+ LHD++ E KE +L  HSEKLA+G  +++      PG  +RVFKN+R+CGDCH   K
Sbjct: 710 TKFVLHDMEYEQKEHALSTHSEKLAVGFGIMK----LPPGATVRVFKNIRICGDCHNAFK 765

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +SK+ +   +VRD  RFH F+ G CSC DYW
Sbjct: 766 FMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 8/201 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +L  CS    L+ G QLH  LV +G+   L + N +I MYAKCG +  A +VF  M 
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VSW +++    Q+G+    + LF QM    V P+  T  T + A      VE G  
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
                ++S +   P   +   ++D++ + G  + A  + D MP+K     W A++AG  +
Sbjct: 548 YFNSMLES-YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 192 AGYSDKGL----LLFRKMQEH 208
            G  D G+     LF+ M ++
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQN 627


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/665 (33%), Positives = 370/665 (55%), Gaps = 13/665 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  +++ G  FD    + ++   +  + G +  A  VF ++      +  +++ G   
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTD 65

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  L  + +M    + P+ +T  +  K+     +   G QIH    K GF  +   
Sbjct: 66  KNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTYA 122

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++++MYS CG +  A ++FD M  K++++W  MI  +      ++ + LF +M +   
Sbjct: 123 QNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSEN 182

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           + P+E T  + L AC     +    +IH ++   GF   V  V+   L+D Y KCGC+  
Sbjct: 183 VKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHV--VLNTVLMDVYCKCGCVQL 240

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR +FD  ++K++ SW+ +I G+ ++ N  EA+ LFR+++ + ++ D   ++S++     
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +E GK +HAY  K    +D ++  ++VDMY KCG I+ A ++F+EMP K+V+TWT +
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I G    G A+ A+  F +M +  V+PD + ++ VL+ACSH+G V+E   +F+ + +   
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++P IEHY  +VD LGRAGR+ EA+ LI+SMP+ P   +   LL ACR+HG+LE      
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAA 480

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + LL +D  +   YV++SNI+  +  W E +R R+L   +G++K  G S +EV   +H F
Sbjct: 481 KQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEF 540

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +H  + +I+++L +M  ++K   G+V      L D+ EE KE  L +HSEKLAI 
Sbjct: 541 VKGDSSHRQSSEINEMLEDMISKLKNA-GYVPDKSEVLFDMAEEEKETELSLHSEKLAIA 599

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    L+   G  IRV KNLR+C DCH   K +SK+     +VRD  RFH F+ G CS
Sbjct: 600 FGL----LSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCS 655

Query: 690 CGDYW 694
           C  +W
Sbjct: 656 CRGFW 660



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 186/376 (49%), Gaps = 9/376 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +R       + C  +     G Q+H    K+GF+ D    N L++MY+ CG +  A 
Sbjct: 84  LIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSAR 140

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ-MGSSSVKPNEFTLSTNIKASGVL 126
            VFDKM ++ VVSW  ++    Q       + LF + M S +VKPNE TL   + A    
Sbjct: 141 KVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARA 200

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             +    +IH    + GF  + V+   ++D+Y KCG +  A  +FD    K+L +WN MI
Sbjct: 201 RDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMI 260

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G+V     ++ LLLFR+MQ  G   D+ T  S L AC  LG++  G  +H ++      
Sbjct: 261 NGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRI- 319

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             V   +  +LVD Y KCG +  A +VF  + +K V++W++LILG A       A++ F 
Sbjct: 320 -DVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFD 378

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           ++  + ++ D      ++   +    V++G   H  +     G+  ++ +   +VD+  +
Sbjct: 379 EMHIKGVKPDAITFVGVLAACSHAGFVDEGIS-HFNSMSDTYGIQPTIEHYGGLVDILGR 437

Query: 365 CGLIDEATELFNEMPV 380
            G I EA EL   MP+
Sbjct: 438 AGRIAEAEELIKSMPM 453


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/635 (34%), Positives = 352/635 (55%), Gaps = 31/635 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G QLH  L K G S D ++   L+D+Y KCG++  A  +F+     NV
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNV 310

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  ++  F Q  +      LFCQM ++ ++PN+FT    ++       ++ G QIH +
Sbjct: 311 VLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSL 370

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GFE +  V   +IDMYSK G + +A R+ +++  K +++W +MIAGYV   Y    
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDA 430

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L  F++MQ+ G  PD     S +  C  + ++  G QIH  +  SG  YS    I  +LV
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSG--YSGDVSIWNALV 488

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y +CG + EA   F+ IE K  I+W+ L+ G+AQ     EA+++F ++ +  ++ + F
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              S +   A+ A ++QGKQIHA   K     +T V N+++ +Y KCG  ++A   F+EM
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +N V+W  IIT   +HG   EA+  F     D ++ +G++                  
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDFF-----DQMKKEGLS------------------ 645

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            YF  + +   ++PR +HY+C++D  GRAG+LD AK  +E MP+     +W+TLLSAC+V
Sbjct: 646 -YFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKV 704

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H ++E+G    + LL L+  +  +YV++SN +A  G W   +++RK+ R +G++K  GRS
Sbjct: 705 HKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRS 764

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           W+EV   +H F+ GD  HPL E+I+  L  +  R+  ++G+     +  HD ++E ++ +
Sbjct: 765 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVA-KVGYKQEKYHLFHDKEQEGRDPT 823

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
             VHSEKLA+   L    ++  P   +RV KNLRV
Sbjct: 824 DLVHSEKLAVTFGL----MSLPPCMPLRVIKNLRV 854



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 272/532 (51%), Gaps = 19/532 (3%)

Query: 15  LADSLRCCSKN-LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            A +LR C  N        ++H   +  G   D ++ N LID+Y+K G +  A  VF+++
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
             R+ VSW A++ G+ QNG  +  L L+ QM  + V P  + LS+ + +         G 
Sbjct: 104 SARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +H    K GF     VGN++I +Y +CG    A R+F  MP +  +T+N +I+G+    
Sbjct: 164 SVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCA 223

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           + +  L +F +MQ  G  PD  T +S L AC SLG +  GTQ+H +L  +G   S   ++
Sbjct: 224 HGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGM--SSDYIM 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
            GSL+D YVKCG +  A  +F+L  + +V+ W+ +++ + Q  +LA++ ELF Q++   +
Sbjct: 282 EGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGI 341

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + + F    ++        ++ G+QIH+ + K     D  VS  ++DMY K G +++A  
Sbjct: 342 RPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS---- 429
           +   +  K+VV+WT +I GY +H   K+A+  F++M    + PD +   + +S C+    
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKA 461

Query: 430 -HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
              GL   ++ Y S    D      +  ++ +V+   R GR+ EA +  E +  K  I  
Sbjct: 462 MRQGLQIHARVYVSGYSGD------VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT- 514

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           W  L+S     G   L  E  ++ +R+D  + V + + + + A + S N  E
Sbjct: 515 WNGLVSGFAQSG---LHEEALKVFMRMD-QSGVKHNVFTFVSALSASANLAE 562



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 256/486 (52%), Gaps = 4/486 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K  L   G  +H    K GF  +  + N LI +Y +CG    A  VF  M 
Sbjct: 146 LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMP 205

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ V++  L+ G  Q  + +  L +F +M SS + P+  T+S+ + A   L  ++ G Q
Sbjct: 206 HRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K+G   + ++  S++D+Y KCG +  A  +F++    +++ WN ++  +     
Sbjct: 266 LHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQIND 325

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             K   LF +MQ  G  P++FT+   L+ C   G +  G QIH   + +GF   +   ++
Sbjct: 326 LAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM--YVS 383

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G L+D Y K G L +ARRV +++++K V+SW+S+I GY Q E   +A+  F+++++  + 
Sbjct: 384 GVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIW 443

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   L+S +   A    + QG QIHA         D S+ N++V++Y +CG I EA   
Sbjct: 444 PDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F E+  K+ +TW  +++G+ + GL +EA+ +F +M    V+ +   +++ LSA ++   +
Sbjct: 504 FEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  +R+          E  + ++   G+ G  ++AK     M  +  ++ W T+++
Sbjct: 564 KQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIIT 621

Query: 495 ACRVHG 500
           +C  HG
Sbjct: 622 SCSQHG 627


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/665 (34%), Positives = 371/665 (55%), Gaps = 14/665 (2%)

Query: 32  VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN--VVSWTALMCGFL 89
            +LH  LV    S    L   L   YA+ G ++ A +           + +W AL+    
Sbjct: 32  TRLHALLV---VSSSQNLFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARS 88

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G+  A L +F  + SS+ +P+  T +  + A   L  ++    +      +G+  +  
Sbjct: 89  RAGSPGAALRVFRALPSSA-RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVF 147

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V ++++ +YS+CG + +A R+FD MP K  + W+ M+AG+V AG   + L ++ +M+EHG
Sbjct: 148 VCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHG 207

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              DE      ++AC   G+   G  +HG  +  G    V  VIA SLVD Y K G    
Sbjct: 208 VAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDV--VIATSLVDMYAKNGHFDV 265

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VF ++  ++ +SW++LI G+AQ  +  EA++LFR++    LQ D   L S +   AD
Sbjct: 266 ARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACAD 325

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ GK IH +  +        +  +++DMY KCG ++ A +LFN++  +++V W  +
Sbjct: 326 VGFLKLGKSIHGFILRRLE-FQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAM 384

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG   +A+ LF+++    ++PD   + ++LSA SHSGLVEE + +F R+  +  
Sbjct: 385 IACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFG 444

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++P  +H  C+VD L R+G ++EA  ++ SM  +P+I IW  LLS C  +  LELG  + 
Sbjct: 445 IEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIA 504

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +L    ++     ++SN++A A  W++   +RKL +  G KKV G S +EV    H F
Sbjct: 505 KKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAF 564

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              D +HP  ++I +++ ++   M+ ++G+V   ++  HD+ E+ KE+ L  HSE+LAI 
Sbjct: 565 VMEDQSHPQHQEILKMISKLSFEMR-KMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIA 623

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN  PG  + + KNLRVCGDCH+ IK +SKI+    VVRDA RFH F+ G CS
Sbjct: 624 FGL----LNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACS 679

Query: 690 CGDYW 694
           CGDYW
Sbjct: 680 CGDYW 684



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 216/417 (51%), Gaps = 19/417 (4%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C++   LD    +       G+  D+ + + L+ +Y++CG M  A  VFD M  ++
Sbjct: 117 ALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKD 176

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+ ++ GF+  G     L ++ +M    V  +E  +   I+A  +  +   G  +HG
Sbjct: 177 HVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHG 236

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G   + V+  S++DMY+K G  + A ++F +MP ++ ++WNA+I+G+   G++D+
Sbjct: 237 RFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADE 296

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR+M   G  PD     S L AC  +G +  G  IHGF++        + ++  ++
Sbjct: 297 ALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR---LEFQCILGTAV 353

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L  AR++F+ +  + ++ W+++I          +A+ LF++L E  ++ D 
Sbjct: 354 LDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDH 413

Query: 318 FVLSSMMGVFADFALVEQGK-----QIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
              +S++   +   LVE+GK      I  +      G++ +  +   +VD+  + GL++E
Sbjct: 414 ATFASLLSALSHSGLVEEGKFWFDRMITEF------GIEPTEKHCVCVVDLLARSGLVEE 467

Query: 371 ATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           A E+   M  +  +  W  +++G   +   +    + +K+L  + +P+ +  LA++S
Sbjct: 468 ANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKIL--ESQPEDIGVLALVS 522


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/677 (33%), Positives = 372/677 (54%), Gaps = 9/677 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+CC++   L  G   H A++K+G   D+   N L+ +YAK G +  A  VFD M  R++
Sbjct: 127 LKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDI 186

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW  ++ G++ NG     L+ F +M  +  V  +   +   + A  + S++  G +IHG
Sbjct: 187 VSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHG 246

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G E +  VG S++DMY KCG +  A  +F  MP ++++TWN MI GY L      
Sbjct: 247 YAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVD 306

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
               F +M+  G   +  T  + L AC    S   G  +H +++   F   V  V+  +L
Sbjct: 307 AFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV--VLETAL 364

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y K G +  + ++F  I  K+++SW+++I  Y   E   EA+ LF +L  + L  D 
Sbjct: 365 LEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDY 424

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F +++++  F     + Q KQ+H+Y  K+  G  T + N+++ MY +CG I  + E+F++
Sbjct: 425 FTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDK 484

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           MP K+V++W  II GY  HG  K A+ +F +M    +EP+   +++VL+ACS SGL  E 
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            + F+ +  +  M P+IEHY C+ D LGRAG L E    IE+MP+ P+  IW +LL+A R
Sbjct: 545 WKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASR 604

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
              D+++     E + +L+ +N   YV++S+++ADAG W + ER+R L + KGL++   R
Sbjct: 605 NKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEAR 664

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S VE++ +   F  GD +HP +EKIH+    + + + E+L     ++        +    
Sbjct: 665 SLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDLDSSSNLR------DSDPFAS 718

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           S  V   K ++ LA+  G ++ + G  + V KN+RVC  CH  +K +SK      VV D 
Sbjct: 719 STTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDT 778

Query: 678 TRFHRFEGGVCSCGDYW 694
             +H F  G C CGDYW
Sbjct: 779 KIYHIFSDGSCCCGDYW 795



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 213/461 (46%), Gaps = 13/461 (2%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LI  +   G M+ A   F  +          ++ GF         L+ +  M  +  +P+
Sbjct: 60  LILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPD 119

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            FT    +K      ++  G   H   +K G   +    NS++ +Y+K G + +A R+FD
Sbjct: 120 RFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFD 179

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVG 231
            MPA+ +++WN M+ GYV  G     L  FR+M +  ++  D     + L AC    ++ 
Sbjct: 180 GMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALA 239

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G +IHG+ I  G    VK  +  SLVD Y KCG +  A  VF  +  ++V++W+ +I G
Sbjct: 240 LGREIHGYAIRHGLEQDVK--VGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           YA  E   +A + F Q+R    QV+     +++   A       G+ +HAY  +      
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPH 357

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
             +  ++++MY K G ++ + ++F ++  K +V+W  +I  Y    + +EA+ LF ++L 
Sbjct: 358 VVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLN 417

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN----DKRMKPRIEHYSCIVDSLGRA 467
             + PD      V+ A    G + + ++  S +      D  +       + ++    R 
Sbjct: 418 QPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLI-----MNAVMHMYARC 472

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           G +  ++ + + MP K  I+ W T++    +HG  ++  E+
Sbjct: 473 GNIVASREIFDKMPGKDVIS-WNTIIIGYAIHGQGKIALEM 512



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 4/377 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C     L  G ++HG  ++ G   D+ +   L+DMY KCG +  A  VF KM  R 
Sbjct: 228 ALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRT 287

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VV+W  ++ G+  N         F QM     +    T    + A     S   G  +H 
Sbjct: 288 VVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHA 347

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++  F  + V+  ++++MY K G++  + ++F  +  K+L++WN MIA Y+      +
Sbjct: 348 YVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQE 407

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + LF ++      PD FT T+ + A   LGS+    Q+H +++  G  Y   T+I  ++
Sbjct: 408 AIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLG--YGDSTLIMNAV 465

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y +CG +V +R +FD +  K VISW+++I+GYA       A+E+F +++   ++ + 
Sbjct: 466 MHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNE 525

Query: 318 FVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               S++   +   L  +G K+ ++   +            + D+  + G + E      
Sbjct: 526 STFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIE 585

Query: 377 EMPVKNVV-TWTVIITG 392
            MP+      W  ++T 
Sbjct: 586 NMPIAPTSRIWGSLLTA 602



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 194/403 (48%), Gaps = 28/403 (6%)

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I  +   GR++EAA  F  +        N MI G+  A      L  +R M + G  P
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FTF   LK C   G++G G   H  +I  G    V T  A SLV  Y K G + +A R
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYT--ANSLVALYAKLGLVGDAER 176

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA- 331
           VFD +  + ++SW++++ GY      A A+  FR++ + +LQV        +GV A  A 
Sbjct: 177 VFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMND-ALQVG----HDSVGVIAALAA 231

Query: 332 -----LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
                 +  G++IH YA +     D  V  S+VDMY KCG +  A  +F +MP++ VVTW
Sbjct: 232 CCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTW 291

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEES-QEYFSR 443
             +I GY  +    +A   F +M +D  + + V  + +L+AC+   S L   S   Y  R
Sbjct: 292 NCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVR 351

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
               +   P +   + +++  G+ G+++ ++ +   +  K ++  W  +++A   +  +E
Sbjct: 352 ----RHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDK-TLVSWNNMIAA---YMYME 403

Query: 504 LGREVGEILLRLDGDN--PVNYVMMSNIHADA--GSWNECERL 542
           + +E   + L L      P  + M + + A    GS  +C+++
Sbjct: 404 MYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQM 446


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/710 (32%), Positives = 373/710 (52%), Gaps = 77/710 (10%)

Query: 53  LIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSSSV 109
           L+   A  G +  A A FD +    R+ V   A+M  F +   A   +S+F   +GS S+
Sbjct: 98  LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157

Query: 110 KPNEFTLSTNIKASGVLSSV--ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC------ 161
           +P++++ +  I A G + ++   +  Q+H   +KSG      V N++I +Y KC      
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217

Query: 162 ----------------------------GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
                                       G +N A  +F+ +  K  + WNAMI+GYV +G
Sbjct: 218 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG 277

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI--TSGFPYSVKT 251
                  LFR+M       DEFTFTS L AC + G    G  +HG +I     F      
Sbjct: 278 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAAL 337

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME-------- 303
            +  +LV  Y K G +V A+R+FD +  K V+SW++++ GY     L +A+E        
Sbjct: 338 PVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK 397

Query: 304 -----------------------LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
                                  LF Q+R   ++   +  +  +    +   ++ G+Q+H
Sbjct: 398 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLH 457

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           A+  +       S  N+++ MY KCG +++A  +F  MP  + V+W  +I+  G+HG  +
Sbjct: 458 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 517

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ LF +M+ + ++PD +++L +L+AC+H+GLV+E   YF  +  D  + P  +HY+ +
Sbjct: 518 EALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARL 577

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D LGR+GR+ EA++LI++MP +P+ +IW+ +LS CR +GD+E G    + L R+   + 
Sbjct: 578 IDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 637

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             Y+++SN ++ AG W +  R+RKL R +G+KK  G SW+EV  +IH F  GD  HP  +
Sbjct: 638 GTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQ 697

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           +++Q L  +  RM+ +LG+V   K+ LHD++   KE  L  HSEKLA+G  L    L   
Sbjct: 698 EVYQFLEVIGARMR-KLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGL----LKLP 752

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           PG  + V KNLR+CGDCH  +  +SK +    VVRD  RFH F+ G CSC
Sbjct: 753 PGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 201/446 (45%), Gaps = 77/446 (17%)

Query: 25  NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------------------------ 60
           NL   +  QLH +++K G +  L ++N LI +Y KC                        
Sbjct: 176 NLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTW 235

Query: 61  ----------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
                     G++N A +VF+++  +  V W A++ G++Q+G       LF +M S  V 
Sbjct: 236 TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVP 295

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINE 166
            +EFT ++ + A        +G  +HG  ++    + P     V N+++ +YSK G+I  
Sbjct: 296 LDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVI 355

Query: 167 AARMFD-------------------------------VMPAKSLITWNAMIAGYVLAGYS 195
           A R+FD                               VMP K+ ++W  M++GYV  G S
Sbjct: 356 AKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLS 415

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +  L LF +M+     P ++T+   + ACG LG++  G Q+H  L+  GF  S       
Sbjct: 416 EDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS--NSAGN 473

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+  Y KCG + +AR VF ++     +SW+++I    Q  +  EA+ELF Q+    +  
Sbjct: 474 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 533

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAA-KVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
           D     +++       LV++G   H + + K   G+     +   ++D+  + G I EA 
Sbjct: 534 DRISFLTILTACNHAGLVDEG--FHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEAR 591

Query: 373 ELFNEMPVKNVVT-WTVIITGYGKHG 397
           +L   MP +   + W  I++G   +G
Sbjct: 592 DLIKTMPFEPTPSIWEAILSGCRTNG 617



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 201/449 (44%), Gaps = 83/449 (18%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           P    S++   +  GR+ +AA  FD +P   +  +  NAM++ +  A  +   + +F  +
Sbjct: 92  PSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHAL 151

Query: 206 QEHGEI-PDEFTFTSTLKACGSLGSVGGG--TQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
              G + PD+++FT+ + A G + ++     TQ+H  ++ SG   +    ++ +L+  Y+
Sbjct: 152 LGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSG--AAAVLSVSNALIALYM 209

Query: 263 KC----------------------------------GCLVEARRVFDLIEQKSVISWSSL 288
           KC                                  G +  AR VF+ ++ K  + W+++
Sbjct: 210 KCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAM 269

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY------ 342
           I GY Q    A+A ELFR++    + +D F  +S++   A+      GK +H        
Sbjct: 270 ISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQP 329

Query: 343 ------AAKVPSGLDTSVS-----------------------NSIVDMYLKCGLIDEATE 373
                 A  V + L T  S                       N+I+  Y+  G +D+A E
Sbjct: 330 NFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 389

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F  MP KN ++W V+++GY   GL+++A+ LF +M  +DV+P    Y   ++AC   G 
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 449

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++  ++  + L      +      + ++    + G +++A+ +   MP   S++ W  ++
Sbjct: 450 LKHGRQLHAHLVQCG-FEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS-WNAMI 507

Query: 494 SACRVHGDLELGREVGEILLRL--DGDNP 520
           SA   HG    GRE  E+  ++  +G +P
Sbjct: 508 SALGQHGH---GREALELFDQMVAEGIDP 533



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 51/337 (15%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF----DLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  C+      +G  +HG ++++  +F     L +NN L+ +Y+K G++  A  +FD M 
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364

Query: 75  ERNVVSWTALMCGFLQNGN-------------------------------AKACLSLFCQ 103
            ++VVSW  ++ G++ +G                                ++  L LF Q
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M +  VKP ++T +  I A G L ++++G Q+H   ++ GFE +   GN+++ MY+KCG 
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +N+A  +F VMP    ++WNAMI+     G+  + L LF +M   G  PD  +F + L A
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544

Query: 224 CGSLGSVGGG-----TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           C   G V  G     +    F I+ G  +  +      L+D   + G + EAR +   + 
Sbjct: 545 CNHAGLVDEGFHYFESMKRDFGISPGEDHYAR------LIDLLGRSGRIGEARDLIKTMP 598

Query: 279 QKSVIS-WSSLILGYAQEENLA----EAMELFRQLRE 310
            +   S W +++ G     ++      A +LFR + +
Sbjct: 599 FEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 8/200 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  C +   L +G QLH  LV+ GF       N L+ MYAKCG +N A  VF  M  
Sbjct: 438 AGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN 497

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+ +  L LF QM +  + P+  +  T + A      V+ G   
Sbjct: 498 LDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH- 556

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLA 192
           +   MK  F  +P   +   +ID+  + GRI EA  +   MP +   + W A+++G    
Sbjct: 557 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 616

Query: 193 GYSDKGLL----LFRKMQEH 208
           G  + G      LFR + +H
Sbjct: 617 GDMEFGAYAADQLFRMIPQH 636


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/612 (35%), Positives = 347/612 (56%), Gaps = 40/612 (6%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           L   ++A     S   G ++H   +K+G +    + N++I+MY KCG I +A  +F+ +P
Sbjct: 6   LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
            +  I+W +++     A      L +F  M ++ G  PD + F   +KAC  LG++  G 
Sbjct: 66  HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+H   I S  P S   V+  SLVD Y KCG     R VFD I  K+ ISW+++I GYAQ
Sbjct: 126 QVHATFIVS--PVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183

Query: 295 EENLAEAMELFRQLRERSLQ--------------------------------VDGFVLSS 322
                +A++LF+++  ++L                                 VD F+LSS
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSS 243

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++G  A+ A++  GKQIH     +       VSN++VDMY KC  +  A ++F  M  ++
Sbjct: 244 IIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRD 303

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           +V+WT II G  +HGLA+EA+ L+ +ML   ++P+ V ++ ++ ACSH GLV + + +F+
Sbjct: 304 IVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFN 363

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  D  + P ++HY+C++D L R+G L+EA+NLI++MP KP  A W  LLSAC  H + 
Sbjct: 364 SMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNT 423

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
            +G  V + LL L  ++P  Y+++SNI+A A  W    ++R+L  +  +KK  G S + +
Sbjct: 424 LIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVL 483

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
            KE   F  G+ +HP  E+I  +L E++  MK+  G++      LHD++++ KE  L  H
Sbjct: 484 GKESQVFLAGETSHPAKEEIFGLLEELDAEMKKR-GYIPDTSSVLHDLEQQEKERQLFWH 542

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SE+LA+   L++G     PG V+ + KNLRVCGDCH  +K +S I+K   VVRDA R+H 
Sbjct: 543 SERLAVAYGLLKG----IPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHH 598

Query: 683 FEGGVCSCGDYW 694
           F+ G CSC ++W
Sbjct: 599 FKDGKCSCNNFW 610



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 240/493 (48%), Gaps = 44/493 (8%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
            L   L+ C+++     G +LH  ++K G      L+N+LI+MY KCG +  A  +F+++
Sbjct: 5   HLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQL 64

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENG 132
             R+ +SW +++    Q       LS+F  M     ++P+ +  +  +KA  +L +++ G
Sbjct: 65  PHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQG 124

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKC------------------------------- 161
            Q+H   + S    + VV +S++DMY+KC                               
Sbjct: 125 KQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQS 184

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-EIPDEFTFTST 220
           GR  +A ++F  MP K+L++W A+I+G V +G       LF +M+  G +I D F  +S 
Sbjct: 185 GRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSI 244

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           + A  +L  +G G QIH  +I  G+  S+   ++ +LVD Y KC  ++ A+++F  + Q+
Sbjct: 245 IGASANLAVLGLGKQIHCLVILLGYESSL--FVSNALVDMYAKCSDVLAAKKIFGRMVQR 302

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            ++SW+S+I+G AQ     EA+ L+ ++    L+ +      ++   +   LV +G+   
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFF 362

Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
               K   G++ S+ +   ++D+  + G ++EA  L   MP K +  TW  +++    H 
Sbjct: 363 NSMIK-DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHH- 420

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
                +G+     L  ++P+  +   +LS    S  + ES     RL     +K +   Y
Sbjct: 421 -RNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVK-KEPGY 478

Query: 458 SCIVDSLGRAGRL 470
           SCIV  LG+  ++
Sbjct: 479 SCIV--LGKESQV 489


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/699 (34%), Positives = 377/699 (53%), Gaps = 23/699 (3%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+  R      L  C  +  L     +H  + ++GF  D+++   L+ MY +CG ++ + 
Sbjct: 229 LLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESI 288

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           AVF+ M  RN VSW A++  F Q G+  A  +++ +M     +PN+ T  T +KA+   S
Sbjct: 289 AVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSS 348

Query: 128 SVENG--MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           S + G    +HG    +G E + +VG +++ MY   G I+ A   FD +PAK++++WNAM
Sbjct: 349 SQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAM 408

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +  Y   G + + + LF  M+     P++ ++ + L  C     V     IH  ++ +G 
Sbjct: 409 LTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGL 465

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
            ++ ++ IA  +V  + + G L EA   FD    K  +SW++ +   +  E+L  A+  F
Sbjct: 466 -FAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAF 524

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA-YAAKVPSGLDTSVSNSIVDMYLK 364
             ++    + D F L S++ V AD   +E G+ I    +A +    D  V +++++M  K
Sbjct: 525 YTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAK 584

Query: 365 CGL-IDEATELFNEMP--VKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVA 420
           CG  +DE   LF  MP   K++V W  +I  Y +HG  ++A+ LFR M     V PD   
Sbjct: 585 CGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSST 644

Query: 421 YLAVLSACSHSGLVEESQEYF--SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           +++VLS CSH+GLVE+    F  +R       +P +EHY+C+VD LGR G L EA++ I 
Sbjct: 645 FVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP-VEHYACLVDVLGRMGYLREAEDFIR 703

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
            MP+     +W +LL AC  +GDLE G       + L   + V YV++SNI+A AG W +
Sbjct: 704 KMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWED 763

Query: 539 CERLRK-LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
             R+R+ +A  +  K+  G+S + V   +H F+  D +HP +++I+  L E  K +  E 
Sbjct: 764 SIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAEL-ERLKGLIREA 822

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGD 656
           G+V   +  LHD++EE KE+ L  HSEKLAI       GL   P +  IRV KNLRVC D
Sbjct: 823 GYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAF-----GLISVPHRHSIRVIKNLRVCKD 877

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRF-EGGVCSCGDYW 694
           CH   K ++++ +    VRD  RFH F + G CSCGDYW
Sbjct: 878 CHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 256/542 (47%), Gaps = 34/542 (6%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + LA  LR C  +  L  G QLH  +VK G + + +L N L+ MY+KC  ++ A A F  
Sbjct: 25  ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMG---SSSVKPNEFTLSTNIKASGVLSSV 129
           +  R + +W  L+       +  A   L+ +M     +  +PN  T+   I   G ++S 
Sbjct: 85  LRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTI---IAVLGAIASG 138

Query: 130 E---------NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           +             +H     S  E +  V  +++D Y KCG +  A  +F  +    LI
Sbjct: 139 DPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 198

Query: 181 TWNAMIAGYVLAG---YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            WNA I     AG     D+ LLL R+M   G +P+  +F + L +CG   S+     IH
Sbjct: 199 CWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIH 256

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
             +   GF   V  V+A +LV  Y +CG + E+  VF+ +  ++ +SW+++I  +AQ  +
Sbjct: 257 ARVEELGFLGDV--VVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGH 314

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ--IHAYAAKVPSGLDTSVS 355
            + A  ++ ++++   + +     + +      +  + G+   +H + A      D  V 
Sbjct: 315 RSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVG 374

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
            ++V MY   G ID A   F+ +P KN+V+W  ++T YG +G A+EA+ LF  M    + 
Sbjct: 375 TALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLA 434

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P+ V+YLAVL  C     V E++   + +  +          + +V    R+G L+EA  
Sbjct: 435 PNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMA 491

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS--NIHADA 533
             ++  VK S++ W T ++A     DL  G       ++ +G  P  + ++S  ++ AD 
Sbjct: 492 AFDATVVKDSVS-WNTKVAALSAREDLH-GAITAFYTMQHEGFRPDKFTLVSVVDVCADL 549

Query: 534 GS 535
           G+
Sbjct: 550 GT 551



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 224/463 (48%), Gaps = 15/463 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG-NAKACLSLFCQM 104
           DL +   L+D Y KCG +  A  VF ++   +++ W A +     N       L L  +M
Sbjct: 165 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 224

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               + PN  +    + + G  SS+     IH    + GF  + VV  +++ MY +CG +
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           +E+  +F+ M  ++ ++WNAMIA +   G+      ++ +MQ+ G  P++ TF + LKA 
Sbjct: 285 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344

Query: 225 GSLGS--VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            S  S  +G    +HG++  +G    V  ++  +LV  Y   G +  AR  FD I  K++
Sbjct: 345 CSSSSQDLGESAALHGWIACAGLEGDV--MVGTALVTMYGSTGAIDRARAAFDAIPAKNI 402

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +SW++++  Y       EAMELF  ++ +SL  +     +++G   D   V + + IHA 
Sbjct: 403 VSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAE 459

Query: 343 AAKVPSGL---DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
              V +GL   ++S++N +V M+ + G ++EA   F+   VK+ V+W   +         
Sbjct: 460 V--VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDL 517

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
             A+  F  M  +   PD    ++V+  C+  G +E  +    +L     ++  +   S 
Sbjct: 518 HGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESA 577

Query: 460 IVDSLGRAG-RLDEAKNLIESMP-VKPSIAIWQTLLSACRVHG 500
           +++ + + G  +DE + L   MP  +  +  W T+++A   HG
Sbjct: 578 VMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 620


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/568 (36%), Positives = 335/568 (58%), Gaps = 3/568 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           ++ G  +H  +V  GF+    ++  L++MYAK  E+  +  VF+ M E NVVSW A++ G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F  N        LF +M    V P+  T     KA G+L  V    ++ G  ++ G + N
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306

Query: 148 PVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +VG ++IDM SKCG + EA  +F+   +  +    WNAMI+GY+ +G+++K L LF KM
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            ++    D +T+ S   A  +L  +  G ++H   I SG   +  + I+ ++ + Y KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS-ISNAVANAYAKCG 425

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L + R+VF+ +E + +ISW+SL+  Y+Q     +A+E+F  +R   +  + F  SS++ 
Sbjct: 426 SLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLV 485

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A+  L+E G+Q+H    KV   +D  + +++VDMY KCG + +A ++FN +   + V+
Sbjct: 486 SCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVS 545

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT II G+ +HG+  +A+ LFR+M+   VEP+ V +L VL ACSH GLVEE  +YF  + 
Sbjct: 546 WTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMK 605

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               + P +EHY+CIVD L R G L++A   I  MPV+P+  +WQTLL ACRVHG++ELG
Sbjct: 606 KTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG 665

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               + +L    +N   YV++SN + ++GS+ +   LR + + +G+KK  G SW+ V+  
Sbjct: 666 ELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGT 725

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           +H FY GD  HP  +KI+  L E++ ++
Sbjct: 726 LHKFYAGDQQHPEKDKIYAKLEELKLKL 753



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 254/496 (51%), Gaps = 15/496 (3%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFS--FDLMLNNDLIDMYAKCGEMNGACAVF 70
           Q L D LR C     L     +HG L+K  FS    L+L N +   Y+KC +++ AC +F
Sbjct: 69  QPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLF 128

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D+M +RN  SWT L+ G  +NG        FC+M S  + P++F  S  ++    L S+E
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G  +H   +  GF  +  V  ++++MY+K   I ++ ++F+ M   ++++WNAMI G+ 
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                     LF +M   G  PD  TF    KA G L  V    ++ G+ +  G      
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGV--DSN 306

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           T++  +L+D   KCG L EAR +F+   I  +    W+++I GY +     +A+ELF ++
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD---TSVSNSIVDMYLKC 365
            +  + +D +   S+    A    +  GK++HA A K  SGL+    S+SN++ + Y KC
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIK--SGLEVNYVSISNAVANAYAKC 424

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +++  ++FN M  +++++WT ++T Y +     +A+ +F  M  + + P+   + +VL
Sbjct: 425 GSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVL 484

Query: 426 SACSHSGLVEESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            +C++  L+E  Q+    +C     M   IE  S +VD   + G L +AK +   +    
Sbjct: 485 VSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 485 SIAIWQTLLSACRVHG 500
           +++ W  +++    HG
Sbjct: 543 TVS-WTAIIAGHAQHG 557



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 4/190 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   LL+YG Q+HG + K+G   D  + + L+DMYAKCG +  A  VF+++   + 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G  Q+G     L LF +M    V+PN  T    + A      VE G+Q   +
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYS 195
            MK  +   P + +   I+D+ S+ G +N+A      MP + + + W  ++    + G  
Sbjct: 604 -MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNV 662

Query: 196 DKGLLLFRKM 205
           + G L  +K+
Sbjct: 663 ELGELAAQKI 672


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/636 (35%), Positives = 362/636 (56%), Gaps = 24/636 (3%)

Query: 76  RNVVSWTA---LMCGFLQNGNAKACLS----LFCQMGSSSVKPNEFTLSTNI-KASGVLS 127
           +N++ +TA   + C  L   +  + LS    +F       + P  ++   N+ +AS  + 
Sbjct: 9   KNILGFTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIE 68

Query: 128 ---------SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
                    +V      HG  M+   + +  + N +I+ YSKCG +  A ++FD M  +S
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           L++WN MI  Y       + L +F +M+  G    EFT +S L ACG+        ++H 
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
             + +    ++   +  +L+D Y KCG + +A +VF+ ++ KS ++WSS++ GY Q +N 
Sbjct: 189 LSMKTSLDLNL--YVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNY 246

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+ L+R+ +  SL+ + F LSS++   ++ A + +GKQ+HA   K   G +  V++S 
Sbjct: 247 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSA 306

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           VDMY KCG + E+  +F+E+  KN+  W  II+G+ KH   KE + LF KM  D + P+ 
Sbjct: 307 VDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 366

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           V + ++LS C H+GLVEE + +F  +     + P + HYSC+VD LGRAG L EA  LI+
Sbjct: 367 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 426

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           S+P +P+ +IW +LL++CRV  +LEL     + L  L+ +N  N+V++SNI+A    W E
Sbjct: 427 SIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEE 486

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
             + RKL R   +KKV G+SW+++  ++H F  G+ +HP   +I  +L  +   ++ + G
Sbjct: 487 IAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELR-KFG 545

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +   V++ LHD++   KEE L  HSEK    LALV G +    G  +R+ KNLR+C DCH
Sbjct: 546 YKPSVEHELHDVEIGKKEELLMQHSEK----LALVFGLMCLPEGSTVRIMKNLRICVDCH 601

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           EF+K  S   +   +VRDA RFH F  G CSCG++W
Sbjct: 602 EFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 208/363 (57%), Gaps = 5/363 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++N  +      HG  ++M    D+ L+N LI+ Y+KCG +  A  VFD MLER++
Sbjct: 70  LQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSL 129

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++  + +N      L +F +M +   K +EFT+S+ + A G         ++H +
Sbjct: 130 VSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCL 189

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            MK+  + N  VG +++D+Y+KCG IN+A ++F+ M  KS +TW++M+AGYV +   ++ 
Sbjct: 190 SMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEA 249

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLL+R+ Q      ++FT +S + AC +L ++  G Q+H  +  SGF  +V   +A S V
Sbjct: 250 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNV--FVASSAV 307

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L E+  +F  +++K++  W+++I G+A+     E M LF ++++  +  +  
Sbjct: 308 DMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 367

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
             SS++ V     LVE+G++      +   GL  +V +   +VD+  + GL+ EA EL  
Sbjct: 368 TFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 426

Query: 377 EMP 379
            +P
Sbjct: 427 SIP 429



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 2/184 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL   +  L+  +  CS    L  G Q+H  + K GF  ++ + +  +DMYAKCG +  +
Sbjct: 260 SLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRES 319

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F ++ E+N+  W  ++ GF ++   K  + LF +M    + PNE T S+ +   G  
Sbjct: 320 YIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 379

Query: 127 SSVENGMQIHGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNA 184
             VE G +   +   + G   N V  + ++D+  + G ++EA  +   +P +   + W +
Sbjct: 380 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGS 439

Query: 185 MIAG 188
           ++A 
Sbjct: 440 LLAS 443


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/544 (38%), Positives = 331/544 (60%), Gaps = 3/544 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +   L  G  +H  +++ GF  +L L+  LI  Y K GE   A  VFD+M ERNV
Sbjct: 44  LQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNV 103

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA + G+ +NG+ +  L +F QMG + V+ N+FT  + ++A   L  +E GMQIHG 
Sbjct: 104 VSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGC 163

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K+ F  N  V ++++D++SKCG + +A  +F+ M  + +++WNA+I GY    ++D  
Sbjct: 164 IQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDS 223

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             +F  M   G  PD FT  S LKA     ++    QIHG +I  GF   +   + GSL+
Sbjct: 224 FRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHID--LNGSLI 281

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDG 317
           D Y K   +  A  ++  + +K VIS+++++ GYA++ + + EA++LF+ ++   +++D 
Sbjct: 282 DAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDD 341

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
               +M+ V AD A +  G+QIHA A K     D +  N++VDMY K G I++AT  F E
Sbjct: 342 VTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYE 401

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  KNV++WT +ITGYGKHG   EA+ L++KM  + ++P+ + +L++L ACSHSGL  E 
Sbjct: 402 MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEG 461

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            E F+ +     + PR EHYSC++D   R G+L+EA N+I  M +KP+ ++W  +L AC 
Sbjct: 462 WECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACS 521

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           ++G + LG      LLR+D +N  NYV+++ I+A +GSW++  R+R L   + LKK+ G 
Sbjct: 522 IYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGY 581

Query: 558 SWVE 561
           S ++
Sbjct: 582 SIIQ 585


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/705 (33%), Positives = 364/705 (51%), Gaps = 73/705 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            + CS  L    G  +   ++K+GF  D+ + N LI+MYA CG ++ A  VFD     ++
Sbjct: 133 FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G++  GN +    ++ +M                                  
Sbjct: 193 VSWNSMLAGYVLVGNVEEAKDVYDRMP--------------------------------- 219

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                 E N +  NS+I ++ K G + EA ++F+ M  K L++W+A+I+ Y      ++ 
Sbjct: 220 ------ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEA 273

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA---- 254
           L+LF++M  +G + DE    S L AC  L  V  G  +HG ++  G    V    A    
Sbjct: 274 LILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHM 333

Query: 255 -------------------------GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
                                     S++  YVKCG + +AR +FD +  K  +SWS++I
Sbjct: 334 YSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMI 393

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GYAQ++   E + LF++++    + D  +L S++      A ++QGK IHAY  K    
Sbjct: 394 SGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLK 453

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           ++  +  ++++MY+K G +++A E+F  +  K V TW  +I G   +GL  +++  F +M
Sbjct: 454 INIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEM 513

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
               V P+ + ++AVL AC H GLV+E   +F+ +  + ++ P I+HY C+VD LGRAG 
Sbjct: 514 KEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGM 573

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           L EA+ LIESMP+ P ++ W  LL AC+ +GD E G  +G  L+ L  D+    V++SNI
Sbjct: 574 LKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNI 633

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           +A  G+W +   +R + R  G+ K  G S +E    +H F  GD THP  E I  +L EM
Sbjct: 634 YASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEM 693

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFK 649
            K++K E G+    +    DI EE KE +L  HSEKLAI   L+       P   IR+ K
Sbjct: 694 AKKLKLE-GYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAI----DPPTPIRIVK 748

Query: 650 NLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           NLR+C DCH   K +SK      VVRD  RFH F+ G CSC DYW
Sbjct: 749 NLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/471 (22%), Positives = 219/471 (46%), Gaps = 78/471 (16%)

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           +N +  +F  +   N      +M G++Q  +    + ++  M  S+V  + +T     ++
Sbjct: 76  INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
             +  +  +G  I    +K GF+ +  + N++I+MY+ CG +++A ++FD      +++W
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N+M+AGYVL G  ++   ++ +M E                                   
Sbjct: 196 NSMLAGYVLVGNVEEAKDVYDRMPERN--------------------------------- 222

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
                    + + S++  + K G + EA ++F+ ++QK ++SWS+LI  Y Q E   EA+
Sbjct: 223 --------VIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEAL 274

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS------- 355
            LF+++    + VD  V+ S++   +   +V  GK +H    KV  G++T V+       
Sbjct: 275 ILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV--GIETYVNLQNALIH 332

Query: 356 --------------------------NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
                                     NS++  Y+KCG I++A  LF+ MP K+ V+W+ +
Sbjct: 333 MYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAM 392

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GY +     E + LF++M ++  +PD    ++V+SAC+H   +++ + +         
Sbjct: 393 ISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGK-WIHAYIRKNG 451

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           +K  I   + +++   + G +++A  + + +  K  ++ W  L+    ++G
Sbjct: 452 LKINIILGTTLINMYMKLGCVEDALEVFKGLEEK-GVSTWNALILGLAMNG 501



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 191/430 (44%), Gaps = 93/430 (21%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           IN++ ++F  +   +    N M+ GY+      K + +++ M E     D +T+    ++
Sbjct: 76  INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C    +   G  I   ++  GF   V   I  +L++ Y  CG L +AR+VFD      ++
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDV--YIQNTLINMYAVCGNLSDARKVFDGSSVLDMV 193

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+S++ GY    N+ EA +++ ++ ER++                              
Sbjct: 194 SWNSMLAGYVLVGNVEEAKDVYDRMPERNV------------------------------ 223

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
                      SNS++ ++ K G ++EA +LFNEM  K++V+W+ +I+ Y ++ + +EA+
Sbjct: 224 ---------IASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEAL 274

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEESQEYFSRL-------- 444
            LF++M  + +  D V  L+VLSACS           H  +V+   E +  L        
Sbjct: 275 ILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMY 334

Query: 445 --CNDKRMKPRIEHYSCIVDSLG---------RAGRLDEAKNLIESMPVKPSIAIWQTLL 493
             C +     ++   SC +D +          + G +++A+ L +SMP K +++ W  ++
Sbjct: 335 SSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS-WSAMI 393

Query: 494 SAC----RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA-------DAGSWNECERL 542
           S      R    L L +E     ++++G  P   +++S I A       D G W     +
Sbjct: 394 SGYAQQDRFTETLVLFQE-----MQIEGTKPDETILVSVISACTHLAALDQGKW-----I 443

Query: 543 RKLARSKGLK 552
               R  GLK
Sbjct: 444 HAYIRKNGLK 453



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 13/240 (5%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    LD G  +H  + K G   +++L   LI+MY K G +  A  VF  + 
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+ V +W AL+ G   NG     L  F +M    V PNE T    + A   +  V+ G +
Sbjct: 484 EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR 543

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
            H   M    +  P + +   ++D+  + G + EA  + + MP A  + TW A++     
Sbjct: 544 -HFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKK 602

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGS------VGGGTQIHGFLITSG 244
            G ++ G  + RK+ E    PD   F   L     S G+      V G  + HG + T G
Sbjct: 603 YGDNETGERIGRKLVELH--PDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPG 660


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 346/592 (58%), Gaps = 22/592 (3%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           ++P+ FT    IKA   L   E G++IH   +K G++    + NS+I MY KC +   + 
Sbjct: 6   IQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSR 65

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           ++FD MP K+ ++W+A+I   +      +G  LFR+M   G  P      + L A   + 
Sbjct: 66  QVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVR 122

Query: 229 SVGGGTQIHGFLITSG--FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           S      ++  ++ +G  F  SV++  AG     + +CG +  AR++FD I  K +++W+
Sbjct: 123 SHEEADDVYRVVVENGLDFDQSVQSAAAG----MFARCGRVEVARKLFDGIMSKDLVTWA 178

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           + I  Y + +   EA+ L +Q+  + +  D   L   +GV    + +   +  H     +
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAITL---LGVIRACSTLASFQLAHIVHGII 235

Query: 347 PSGLD----TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
            +G       +V  +++D+Y+KCG +  A ++F+ M  +N++TW+ +I+GYG HG  +EA
Sbjct: 236 TTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREA 295

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF +M    V+PD + ++++LSACSHSGLV E  E F+ +  D  + PR EHY+C+VD
Sbjct: 296 LNLFDQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVD 354

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
            LGRAG+LDEA + IE MPV+P+ A+W  LL ACR+H +++L   V   L  LD  N   
Sbjct: 355 ILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGR 414

Query: 523 YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
           YV++ NI+   G   E + +R L +++G+KK+AG S +E+  +++ F  GD +HP T+ I
Sbjct: 415 YVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLI 474

Query: 583 HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
           +  L  +  R+++E G+   + + LHD+ EE+KE  L +HSEKLAI    V G LN  PG
Sbjct: 475 YSELERLMDRIRQE-GYTPDINFVLHDVDEETKESMLYLHSEKLAI----VFGLLNLGPG 529

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            VIR+ KNLRVCGDCH   K +SK+     VVRDA RFH F+ G CSC DYW
Sbjct: 530 SVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 204/379 (53%), Gaps = 17/379 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ CS     ++G+++H  +VK G+   + ++N LI MY KC +   +  VFD+M ++N 
Sbjct: 17  IKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNA 76

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+A++   LQ+   K   SLF QM S   +P+   +   + A   + S E    ++ +
Sbjct: 77  VSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAI---LNAMACVRSHEEADDVYRV 133

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++G +++  V ++   M+++CGR+  A ++FD + +K L+TW   I  YV A    + 
Sbjct: 134 VVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEA 193

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L ++M   G  PD  T    ++AC +L S      +HG +IT+GF Y+    +  +L+
Sbjct: 194 LGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALI 252

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D YVKCG L  AR+VFD ++++++I+WS++I GY       EA+ LF Q++  S++ D  
Sbjct: 253 DLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMKA-SVKPDHI 311

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS------IVDMYLKCGLIDEAT 372
              S++   +   LV +G +     A+     D  V+        +VD+  + G +DEA 
Sbjct: 312 TFVSILSACSHSGLVAEGWECFNSMAR-----DFGVTPRPEHYACMVDILGRAGKLDEAC 366

Query: 373 ELFNEMPVK-NVVTWTVII 390
           +    MPV+ N   W  ++
Sbjct: 367 DFIERMPVRPNAAVWGALL 385


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/563 (37%), Positives = 330/563 (58%), Gaps = 8/563 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G Q+H   +K+ +     +   +I +Y +CG +++A  + D MP +++++W AMI+GY  
Sbjct: 60  GRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQ 119

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           +G   + L LF +M   G   +EFT  + L +C    S+    Q+H  ++ + F   +  
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHM-- 177

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+D Y K G + EAR+VFD++ ++  +S +++I GYAQ     EA++LFRQL   
Sbjct: 178 FVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSS 237

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +Q +    ++++   +  A +  GKQ+H    +        + NS++DMY KCG +  +
Sbjct: 238 GMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYS 297

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ MP ++ ++W  ++ GYG+HG+ +E V LFR M  ++V+PD V  LAVLS CSH 
Sbjct: 298 RRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHG 356

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E  + F  +  ++     I HY C++D LGR+G+L +A +LIE MP +P+ AIW +
Sbjct: 357 GLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGS 416

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL ACRVH ++ +G  V + LL ++  N  NYV++SNI+A AG W +  R+RKL     +
Sbjct: 417 LLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTV 476

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
            K   +SW+ +DK IH F+  +  HP  + I+  + E+   +K   GFV  +   LHD+ 
Sbjct: 477 TKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAA-GFVPDLSCVLHDVD 535

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           +E KE  L  HSEKLAI   L    +N  PG  I+V KNLR+C DCH F K +SK+    
Sbjct: 536 DEQKERMLLGHSEKLAITFGL----MNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGRE 591

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
             +RD  RFH  + G C+CGDYW
Sbjct: 592 ISLRDKNRFHLLKDGACTCGDYW 614



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 221/411 (53%), Gaps = 7/411 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           ++  C +   L  G Q+H  +VK  +   + L   LI +Y +CG ++ A  V D M ERN
Sbjct: 47  AITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERN 106

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWTA++ G+ Q+G     L LF +M  +  K NEFTL+T + +  V  S++   Q+H 
Sbjct: 107 VVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHS 166

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +K+ FE +  VG+S++DMY K G I EA ++FD++P +  ++  A+I+GY   G  D+
Sbjct: 167 LVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDE 226

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR++   G   +  TFT+ L +   L S+  G Q+HG ++    P+ +  V+  SL
Sbjct: 227 ALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFI--VLQNSL 284

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L+ +RRVFD + Q+S ISW+++++GY +     E ++LFR + E  ++ D 
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDS 343

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELFN 376
             L +++   +   LV++G  I     K  +  +       ++D+  + G + +A +L  
Sbjct: 344 VTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIE 403

Query: 377 EMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            MP +     W  ++     H     +VG      L D+EP       +LS
Sbjct: 404 HMPFEPTPAIWGSLLGACRVH--INVSVGEVVAQKLLDMEPGNAGNYVILS 452



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 144/279 (51%), Gaps = 9/279 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C  +  +    Q+H  +VK  F   + + + L+DMY K G +  A  VFD + 
Sbjct: 145 LATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLP 204

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+ VS TA++ G+ Q G     L LF Q+ SS ++ N  T +T + +   L+S+  G Q
Sbjct: 205 ERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQ 264

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG+ ++    +  V+ NS+IDMYSKCG++  + R+FD MP +S I+WNAM+ GY   G 
Sbjct: 265 VHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGI 324

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + LFR M E  + PD  T  + L  C   G V  G  I   ++       +     
Sbjct: 325 GQEVVQLFRTMTEEVK-PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAV-IHIGHY 382

Query: 255 GSLVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLI 289
           G ++D   + G L   ++  DLIE    + +   W SL+
Sbjct: 383 GCVIDLLGRSGQL---QKALDLIEHMPFEPTPAIWGSLL 418



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 161/296 (54%), Gaps = 7/296 (2%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           + + + AC    ++G G Q+H  ++ +   Y     +A  L+  YV+CG L +AR V D 
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKA--RYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           + +++V+SW+++I GY+Q    AEA+ELF ++     + + F L++++        ++Q 
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +Q+H+   K        V +S++DMY K G I EA ++F+ +P ++ V+ T II+GY + 
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           GL  EA+ LFR++    ++ + V +  +L++ S    +   ++    L   K +   I  
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHG-LILRKELPFFIVL 280

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            + ++D   + G+L  ++ + ++MP + +I+ W  +L     HG   +G+EV ++ 
Sbjct: 281 QNSLIDMYSKCGKLLYSRRVFDNMPQRSAIS-WNAMLMGYGRHG---IGQEVVQLF 332


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/595 (36%), Positives = 335/595 (56%), Gaps = 41/595 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K+G   +  + N++++ Y KCG I +A ++FD +P +  + W +++    L+ 
Sbjct: 24  KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKT 251
              + L + R +   G  PD F F S +KAC +LG   V  G Q+H     S  P+S   
Sbjct: 84  RPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLS--PFSDDD 141

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V+  SL+D Y K G     R VFD I   + ISW+++I GYA+     EA  LFRQ   R
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYR 201

Query: 312 SL---------------QVDGF-----------------VLSSMMGVFADFALVEQGKQI 339
           +L                VD F                 VLSS++G  A+ AL E GKQ+
Sbjct: 202 NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQM 261

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H     +       +SN+++DMY KC  +  A  +F EM  K+VV+WT II G  +HG A
Sbjct: 262 HGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQA 321

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           +EA+ L+ +M+L  V+P+ V ++ ++ ACSH+GLV + +  F  +  D  + P ++HY+C
Sbjct: 322 EEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTC 381

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           ++D   R+G LDEA+NLI +MPV P    W  LLS+C+ HG+ ++   + + LL L  ++
Sbjct: 382 LLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPED 441

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
           P +Y+++SNI+A AG W +  ++RKL  +   KK  G S +++ K  H FY G+ +HP+ 
Sbjct: 442 PSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMR 501

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           ++I  ++ E+++ M++  G+       LHD+ ++ KE  L  HSE+LA+   L++     
Sbjct: 502 DEIIGLMRELDEEMRKR-GYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKA---- 556

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG VIR+ KNLRVCGDCH  +K +S I      VRDA R+H F+ G CSC D+W
Sbjct: 557 VPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 215/443 (48%), Gaps = 45/443 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  ++K G +    + N L++ Y KCG +  A  +FD +  R+ V+W +L+     + 
Sbjct: 24  KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKAS---GVLSSVENGMQIHGMCMKSGFEWNPV 149
                LS+   + S+   P+ F  ++ +KA    GVL  V+ G Q+H     S F  + V
Sbjct: 84  RPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLH-VKQGKQVHARFFLSPFSDDDV 142

Query: 150 VGNSIIDMYSK-------------------------------CGRINEAARMFDVMPAKS 178
           V +S+IDMY+K                                GR  EA R+F   P ++
Sbjct: 143 VKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRN 202

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-EIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           L  W A+I+G V +G       LF +M+  G  + D    +S + AC +L     G Q+H
Sbjct: 203 LFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMH 262

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
           G +IT G  Y     I+ +L+D Y KC  LV A+ +F  + +K V+SW+S+I+G AQ   
Sbjct: 263 GVVITLG--YESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN- 356
             EA+ L+ ++    ++ +      ++   +   LV +G+ +     +   G+  S+ + 
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVE-DHGISPSLQHY 379

Query: 357 -SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             ++D++ + G +DEA  L   MPV  +  TW  +++   +HG  + AV +   +L  ++
Sbjct: 380 TCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLL--NL 437

Query: 415 EP-DGVAYLAVLSACSHSGLVEE 436
           +P D  +Y+ + +  + +G+ E+
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWED 460



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 36/312 (11%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--------------- 75
           G Q+H       FS D ++ + LIDMYAK G  +   AVFD +                 
Sbjct: 125 GKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYAR 184

Query: 76  ----------------RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLST 118
                           RN+ +WTAL+ G +Q+GN      LF +M    +   +   LS+
Sbjct: 185 SGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSS 244

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            + A   L+  E G Q+HG+ +  G+E    + N++IDMY+KC  +  A  +F  M  K 
Sbjct: 245 VVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKD 304

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           +++W ++I G    G +++ L L+ +M   G  P+E TF   + AC   G V  G  +  
Sbjct: 305 VVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFR 364

Query: 239 FLITS-GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEE 296
            ++   G   S++      L+D + + G L EA  +   +       +W++L+    +  
Sbjct: 365 TMVEDHGISPSLQHYTC--LLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHG 422

Query: 297 NLAEAMELFRQL 308
           N   A+ +   L
Sbjct: 423 NTQMAVRIADHL 434



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 2/181 (1%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           V++   L+  +  C+   L + G Q+HG ++ +G+   L ++N LIDMYAKC ++  A  
Sbjct: 236 VTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKY 295

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F +M  ++VVSWT+++ G  Q+G A+  L+L+ +M  + VKPNE T    I A      
Sbjct: 296 IFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGL 355

Query: 129 VENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMI 186
           V  G  +   M    G   +      ++D++S+ G ++EA  +   MP      TW A++
Sbjct: 356 VSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALL 415

Query: 187 A 187
           +
Sbjct: 416 S 416



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 14/166 (8%)

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
            K++HA   K        + N++++ Y KCGLI +A +LF+ +P ++ V W  ++T    
Sbjct: 22  AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE-------YFSRLCNDK 448
                 A+ + R +L     PD   + +++ AC++ G++   Q        + S   +D 
Sbjct: 82  SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            +K      S ++D   + G  D  + + +S+    SI+ W T++S
Sbjct: 142 VVK------SSLIDMYAKFGLPDYGRAVFDSISSLNSIS-WTTMIS 180


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/643 (34%), Positives = 364/643 (56%), Gaps = 29/643 (4%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD M ERNVV+WTAL+ G+  N      L +F +M      P+ +TL   + A      
Sbjct: 95  LFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD 154

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V+ G Q+HG  +K G E    +GNS+  +Y+K G ++ A R F  +P K++ITW  MI+ 
Sbjct: 155 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS- 213

Query: 189 YVLAGYSDK-----GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
              A   D+     G+ LF  M   G +P+EFT TS +  CG+   +  G Q+  F    
Sbjct: 214 ---ACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA---- 299
           G   ++   +  S +  Y++ G   EA R+F+ +E  S+I+W+++I GYAQ  + A    
Sbjct: 271 GCETNLP--VKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 328

Query: 300 -------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
                  +A+ +FR L+   ++ D F  SS++ V +    +EQG+QIHA   K     D 
Sbjct: 329 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 388

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V++++V+MY KCG I +A + F EMP +  VTWT +I+GY +HG  +EA+ LF +M L 
Sbjct: 389 VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 448

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            V P+ + ++++LSACS++GLVEE++ YF  +  +  ++P ++HY C++D   R GR+++
Sbjct: 449 GVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVED 508

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
           A + I+    +P+ AIW +L++ CR HG++EL     + LL L       Y+++ N++  
Sbjct: 509 AFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYIS 568

Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
              W +  R+RKL + + +  +  RSW+ +  +++FF   D THP   +++Q+L  + ++
Sbjct: 569 TERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEK 628

Query: 593 MKEELGFVYGVKYALHDIQEESKEE--SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
            K  +G+       L D +++ K    SL+ HSE+LA+ L L    L   PG  +RV KN
Sbjct: 629 AK-AIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGL----LQTPPGATVRVTKN 683

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           + +C DCH  IK  S +     +VRD+ R H+F+ G CSCGD+
Sbjct: 684 ITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 219/428 (51%), Gaps = 21/428 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L  C  +  +D G Q+HG  +K G      + N L  +YAK G ++ A   F ++ 
Sbjct: 142 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP 201

Query: 75  ERNVVSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           E+NV++WT ++    ++    +  +SLF  M    V PNEFTL++ +   G    +  G 
Sbjct: 202 EKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGK 261

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--VL 191
           Q+     K G E N  V NS + +Y + G  +EA R+F+ M   S+ITWNAMI+GY  ++
Sbjct: 262 QVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIM 321

Query: 192 AGYSD---------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
               D         + L +FR ++     PD FTF+S L  C ++ ++  G QIH   I 
Sbjct: 322 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 381

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           SGF   V  V+  +LV+ Y KCGC+ +A + F  +  ++ ++W+S+I GY+Q     EA+
Sbjct: 382 SGFLSDV--VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 439

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVD 360
           +LF ++R   ++ +     S++   +   LVE+ +       K    ++  V +   ++D
Sbjct: 440 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-EYCIEPVVDHYGCMID 498

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           M+++ G +++A         + N   W+ ++ G   HG  + A     K+L  +++P G+
Sbjct: 499 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL--ELKPKGI 556

Query: 420 -AYLAVLS 426
             Y+ +L+
Sbjct: 557 ETYILLLN 564



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 19/389 (4%)

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A R+FD MP ++++TW A++ GY L      GL +F +M E G  P  +T  +TL AC 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +   V  G Q+HG+ I  G      T +  SL   Y K G L  A R F  I +K+VI+W
Sbjct: 151 ASCDVDLGKQVHGYAIKYG--AESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 208

Query: 286 SSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           +++I   A++E   E  M LF  +    +  + F L+S+M +      +  GKQ+ A++ 
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 268

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK--------- 395
           K+    +  V NS + +YL+ G  DEA  LF +M   +++TW  +I+GY +         
Sbjct: 269 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 328

Query: 396 --HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
                  +A+ +FR +    ++PD   + ++LS CS    +E+ ++  ++      +   
Sbjct: 329 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 388

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           + + S +V+   + G + +A      MP + +   W +++S    HG  +   ++ E  +
Sbjct: 389 VVN-SALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFE-EM 445

Query: 514 RLDGDNP--VNYVMMSNIHADAGSWNECE 540
           RL G  P  + +V + +  + AG   E E
Sbjct: 446 RLAGVRPNEITFVSLLSACSYAGLVEEAE 474


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/510 (40%), Positives = 307/510 (60%), Gaps = 7/510 (1%)

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           M+ GY++     K L LF  + + GE  D+ T  +  KACG L  +  G QIH   I +G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F   +   +   ++D Y+KCG +V A  VF+ I     ++W+S+I G     N  +A+ +
Sbjct: 61  FDSDLH--VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 118

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           + ++R+  +  D +  ++++   +    +EQG+Q+HA   K+    D  V  S+VDMY K
Sbjct: 119 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAK 178

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG I++A  LF +M V+N+  W  ++ G  +HG A+EAV LF+ M    +EPD V+++ +
Sbjct: 179 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 238

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSH+GL  E+ EY   + ND  ++P IEHYSC+VD+LGRAG + EA  +IE+MP K 
Sbjct: 239 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 298

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           S +I + LL ACR+ GD+E G+ V   L  L+  +   YV++SNI+A A  W++    RK
Sbjct: 299 SASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 358

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + + K +KK  G SW++V   +H F   D +HP  + I+  + EM K ++E+ G+V   +
Sbjct: 359 MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED-GYVPDTE 417

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L D+++E KE SL  HSEKLAI   L+    +      IRV KNLRVCGDCH  IK +
Sbjct: 418 FVLLDVEDEEKERSLYYHSEKLAIAYGLI----STPASTTIRVIKNLRVCGDCHNAIKYI 473

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK+ +   V+RDA RFH F  GVCSCGDYW
Sbjct: 474 SKVFEREIVLRDANRFHHFRDGVCSCGDYW 503



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 165/294 (56%), Gaps = 11/294 (3%)

Query: 6   FSLV------SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK 59
           FSL+      S++  LA + + C   +LLD G Q+H   +K GF  DL +N+ ++DMY K
Sbjct: 18  FSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 77

Query: 60  CGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
           CG+M  A  VF+ +   + V+WT+++ G + NGN    L ++ +M  S V P+E+T +T 
Sbjct: 78  CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 137

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           IKAS  ++++E G Q+H   +K     +P VG S++DMY+KCG I +A R+F  M  +++
Sbjct: 138 IKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 197

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
             WNAM+ G    G +++ + LF+ M+ HG  PD  +F   L AC   G     ++ + +
Sbjct: 198 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT---SEAYEY 254

Query: 240 LITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
           L +    Y ++  I     LVD   + G + EA +V + +  K+  S +  +LG
Sbjct: 255 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 162/302 (53%), Gaps = 9/302 (2%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           +M G++   + K  L LF  +  S  K ++ TL+T  KA G L  ++ G QIH   +K+G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +  V + I+DMY KCG +  A  +F+ + A   + W +MI+G V  G  D+ L ++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M++   +PDE+TF + +KA   + ++  G Q+H  +I           +  SLVD Y K
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK--LDCVSDPFVGTSLVDMYAK 178

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG + +A R+F  +  +++  W+++++G AQ  N  EA+ LF+ ++   ++ D     S 
Sbjct: 179 CGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRV---SF 235

Query: 324 MGVFADFALVEQGKQIHAYAAKVPS--GLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
           +G+ +  +      + + Y   +P+  G++  + +   +VD   + GL+ EA ++   MP
Sbjct: 236 IGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 295

Query: 380 VK 381
            K
Sbjct: 296 FK 297


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/673 (33%), Positives = 369/673 (54%), Gaps = 50/673 (7%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           +Y+    ++ +  +F+ +     ++W +++  +  +G     L  F  M +S + P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR------ 169
             + +K+  +L  +  G  +HG  ++ G +++   GN++++MYSK   + E+ R      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 170 --------------------------MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
                                     +F++MP K L++WN +IAG    G  ++ L + R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M      PD FT +S L        +  G +IHG  I  G    +   +A SL+D Y K
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADI--YVASSLIDMYAK 286

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           C  + ++ RVF L+ ++  ISW+S+I G  Q     E +  FRQ+    ++   +  SS+
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVK 381
           M   A    +  GKQ+H Y  +  +G D +  +++S+VDMY KCG I  A ++F+ M ++
Sbjct: 347 MPACAHLTTLHLGKQLHGYITR--NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR 404

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           ++V+WT +I G   HG A +A+ LF +M     E +G+   AVL+ACSH GLV+E+ +YF
Sbjct: 405 DMVSWTAMIMGCALHGQAPDAIELFEQM-----ETEGIK--AVLTACSHGGLVDEAWKYF 457

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           + +  D  + P +EHY+ + D LGRAGRL+EA + I  M + P+ +IW TLLSACRVH +
Sbjct: 458 NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKN 517

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           +++  +V   +L +D +N   Y++++NI++ A  W E  + R   R  G++K    SW+E
Sbjct: 518 IDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIE 577

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           V  +++ F  GD++HP  EKI +  ME+   + E+ G+V       HD++EE K+  +  
Sbjct: 578 VKNKVYAFMAGDESHPCYEKIREA-MEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCS 636

Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
           HSE+LAI    V G +N   G  IRV KNLRVC DCH   K +SKI+    VVRD +RFH
Sbjct: 637 HSERLAI----VFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFH 692

Query: 682 RFEGGVCSCGDYW 694
            F+ G CSCGDYW
Sbjct: 693 HFKNGTCSCGDYW 705



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 220/463 (47%), Gaps = 84/463 (18%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN-------GACAVFD 71
           L+ C+  + L+ G  LHG ++++G  FDL   N L++MY+K   +        GA  VFD
Sbjct: 113 LKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFD 172

Query: 72  KMLER-------------------------NVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
           +M ER                         ++VSW  ++ G  +NG  +  L +  +MG 
Sbjct: 173 EMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGG 232

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           +++KP+ FTLS+ +        +  G +IHG  ++ G + +  V +S+IDMY+KC R+ +
Sbjct: 233 ANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVAD 292

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           + R+F ++  +  I+WN++IAG V  G  D+GL  FR+M      P  ++F+S + AC  
Sbjct: 293 SCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAH 352

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           L ++  G Q+HG++  +GF  ++   IA SLVD Y KCG +  A+++FD +  + ++SW+
Sbjct: 353 LTTLHLGKQLHGYITRNGFDENI--FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWT 410

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I+G A      +A+ELF Q+                G+ A       G          
Sbjct: 411 AMIMGCALHGQAPDAIELFEQMETE-------------GIKAVLTACSHG---------- 447

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-----VKNVVTWTVIITGYGKHGLAKE 401
                              GL+DEA + FN M         V  +  +    G+ G  +E
Sbjct: 448 -------------------GLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 488

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           A      M    + P G  +  +LSAC     ++ +++  +R+
Sbjct: 489 AYDFICGM---HIGPTGSIWATLLSACRVHKNIDMAEKVANRI 528



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L   ++N+ +  G ++HG  ++ G   D+ + + LIDMYAKC  +  +C VF  + 
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+ +SW +++ G +QNG     L  F QM  + +KP  ++ S+ + A   L+++  G Q
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG   ++GF+ N  + +S++DMY+KCG I  A ++FD M  + +++W AMI G  L G 
Sbjct: 362 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           +   + LF +M+  G         + L AC   G V
Sbjct: 422 APDAIELFEQMETEG-------IKAVLTACSHGGLV 450


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 338/573 (58%), Gaps = 13/573 (2%)

Query: 128 SVENGMQIHGMCMKSGFEW--NPVVGNSIIDMYSKCGRINEAARMF---DVMPAKSLITW 182
           S+E+G ++H   ++S      NP +   +I +YS CGR+NEA R+F   D  P +  + W
Sbjct: 85  SLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPV-W 143

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
            AM  GY   G+S + LLL+R M      P  F F+  LKAC  L +   G  IH  ++ 
Sbjct: 144 VAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVK 203

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
                    V+  +L+  YV+ GC  E  +VF+ + Q++V+SW++LI G+A +  + E +
Sbjct: 204 HDVG-EADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETL 262

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
             FR ++   +      L++M+ V A    +  GK+IH    K     D  + NS++DMY
Sbjct: 263 SAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMY 322

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG I    ++F+ M  K++ +W  ++ G+  +G   EA+ LF +M+   +EP+G+ ++
Sbjct: 323 AKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFV 382

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           A+LS CSHSGL  E +  FS +  D  ++P +EHY+C+VD LGR+G+ DEA ++ E++P+
Sbjct: 383 ALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPM 442

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +PS +IW +LL++CR++G++ L   V E L  ++ +NP NYVM+SNI+A+AG W + +R+
Sbjct: 443 RPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRV 502

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIH-FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           R++    G+KK AG SW+++  +IH F  GG      + +  ++  E+   +K  LG+V 
Sbjct: 503 REMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVK-NLGYVP 561

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
                LHDI EE K   +  HSE+LA   AL+  G     G  IR+ KNLRVC DCH ++
Sbjct: 562 NTGVVLHDINEEMKAVWVCEHSERLAAVFALINTG----AGMPIRITKNLRVCVDCHSWM 617

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +SK+ + + V+RD  RFH FE G CSC DYW
Sbjct: 618 KAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 185/372 (49%), Gaps = 14/372 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVF----DK 72
           L  C     L++G +LH  L++       +  L   LI +Y+ CG +N A  VF    +K
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
             E  V  W A+  G+ +NG +   L L+  M S  VKP  F  S  +KA   L +   G
Sbjct: 137 PPEEPV--WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVG 194

Query: 133 MQIHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
             IH   +K    E + VV N+++ +Y + G  +E  ++F+ MP +++++WN +IAG+  
Sbjct: 195 RAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAG 254

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G   + L  FR MQ  G      T T+ L  C  + ++  G +IHG ++ S     V  
Sbjct: 255 QGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVP- 313

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+D Y KCG +    +VFD +  K + SW++++ G++    + EA+ LF ++   
Sbjct: 314 -LLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRY 372

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLID 369
            ++ +G    +++   +   L  +GK++ +   +   G+  S+ +   +VD+  + G  D
Sbjct: 373 GIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQ-DFGVQPSLEHYACLVDILGRSGKFD 431

Query: 370 EATELFNEMPVK 381
           EA  +   +P++
Sbjct: 432 EALSVAENIPMR 443



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 10/332 (3%)

Query: 18  SLRCCSK--NLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +L+ CS   N L+  G  +H  +VK      D ++NN L+ +Y + G  +    VF++M 
Sbjct: 181 ALKACSDLDNALV--GRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMP 238

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +RNVVSW  L+ GF   G     LS F  M    +  +  TL+T +     ++++ +G +
Sbjct: 239 QRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKE 298

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  +KS    +  + NS++DMY+KCG I    ++FD M +K L +WN M+AG+ + G 
Sbjct: 299 IHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQ 358

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +M  +G  P+  TF + L  C   G    G ++   ++   F         
Sbjct: 359 IHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQD-FGVQPSLEHY 417

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSL 313
             LVD   + G   EA  V + I  +   S W SL+       N+A A  +  +L E   
Sbjct: 418 ACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEP 477

Query: 314 QVDG-FVLSSMMGVFADFALVEQGKQIHAYAA 344
              G +V+ S   ++A+  + E  K++    A
Sbjct: 478 NNPGNYVMLS--NIYANAGMWEDVKRVREMMA 507



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   L  G ++HG ++K   + D+ L N L+DMYAKCGE+     VFD+M 
Sbjct: 280 LTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMH 339

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++ SW  ++ GF  NG     L LF +M    ++PN  T    +           G +
Sbjct: 340 SKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKR 399

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
           +    M+  F   P + +   ++D+  + G+ +EA  + + +P + S   W +++    L
Sbjct: 400 LFSNVMQD-FGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRL 458

Query: 192 AG 193
            G
Sbjct: 459 YG 460


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/662 (33%), Positives = 362/662 (54%), Gaps = 7/662 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H +L+      D  L N L+       + + +  +F      N+  +  L+ GF+ N 
Sbjct: 31  QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNH 90

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L LF  +    +  + FT    +KA    S+ + G+ +H + +K GF  +     
Sbjct: 91  LFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++ +YS  GR+N+A ++F+ +P +S++TW A+ +GY  AG   + + LF+KM E G  P
Sbjct: 151 SLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRP 210

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +     L AC  +G +  G  I   +          + +  +LV+ Y KCG + +AR 
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHM--EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD + +K +++WS++I GYA      E +E F Q+ + +L+ D F +   +   A    
Sbjct: 269 VFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGA 328

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G+   +   +     +  ++N+++DMY KCG +    E+F EM  K++V     I+G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             K+G  K +  +F +     + PDG  +L +L  C H+GL+++   +F+ +     +K 
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +EHY C+VD  GRAG LD+A  LI  MP++P+  +W  LLS CR+  D +L   V + L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           + L+  N  NYV +SNI++ +G W+E   +R +   KG+KK+ G SW+E++  +H F   
Sbjct: 509 IALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLAD 568

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HPL++KI+  L ++   M+  +GFV   ++   D+++E KE  L  HSEKLA+   L
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMR-LMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGL 627

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    +   G+VIRV KNLRVCGDCHE +K +SKI +   VVRD  RFH F  G CSC D
Sbjct: 628 I----STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683

Query: 693 YW 694
           YW
Sbjct: 684 YW 685



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 225/446 (50%), Gaps = 11/446 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++      G+ LH  +VK GF+ D+     L+ +Y+  G +N A  VF+++ ER+V
Sbjct: 118 LKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSV 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WTAL  G+   G  +  + LF +M    V+P+ + +   + A   +  +++G  I   
Sbjct: 178 VTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKH 237

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +   + N  V  +++++Y+KCG++ +A  +FD M  K ++TW+ MI GY    +  +G
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEG 297

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           +  F +M +    PD+F+    L +C SLG++  G    G  +     +     +A +L+
Sbjct: 298 IEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALI 355

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +     VF  +++K ++  ++ I G A+  ++  +  +F Q  +  +  DG 
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++       L++ G +    A      L  +V +   +VD++ + G++D+A  L  
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFN-AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLV 434
           +MP++ N + W  +++G       + A  + ++++   +EP +   Y+ + +  S SG  
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA--LEPWNAGNYVQLSNIYSVSGRW 532

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCI 460
           +E+ E    + N K MK +I  YS I
Sbjct: 533 DEAAE-VRDMMNRKGMK-KIPGYSWI 556


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/586 (36%), Positives = 346/586 (59%), Gaps = 8/586 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G  +H  +V  GF+  + ++  L++MYAK G +  +  VF+ M E N VSW A++ G
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              NG       LF +M + +  PN +TL +  KA G L  V  G ++     + G E N
Sbjct: 297 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 356

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDV--MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +VG ++IDMYSKCG +++A  +FD   +       WNAMI+GY  +G S + L L+ +M
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 416

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            ++G   D +T+ S   A  +  S+  G  +HG ++  G    V +V   ++ D Y KCG
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV-NNAIADAYSKCG 475

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L + R+VFD +E++ ++SW++L+  Y+Q     EA+  F  +RE     + F  SS++ 
Sbjct: 476 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 535

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
             A    +E G+Q+H    K  +GLDT   + ++++DMY KCG I EA ++F+++   ++
Sbjct: 536 SCASLCFLEYGRQVHGLLCK--AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI 593

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+WT II+GY +HGL ++A+ LFR+M L  ++ + V  L VL ACSH G+VEE   YF +
Sbjct: 594 VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQ 653

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + +   + P +EHY+CI+D LGR GRLD+A   I  MP++P+  +WQTLL  CRVHG++E
Sbjct: 654 MEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 713

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           LG      +L +  +    YV++SN + + GS+ +   LR + + +G+KK  G SW+ V 
Sbjct: 714 LGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVK 773

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
             +H FY GD  HP  ++I+  L E+ +++K  +G+V  ++Y L++
Sbjct: 774 GRVHKFYSGDQQHPQKKEIYVKLEELREKIK-AMGYVPDLRYVLNN 818



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 257/505 (50%), Gaps = 21/505 (4%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLM-LNNDLIDMYAKCGEMNGAC 67
           ++ Q L D LR C++   +     +HG ++K  F   DLM L N    +Y+KC E   AC
Sbjct: 116 TQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAAC 175

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD+M +RNV SWT ++ G  ++G        FC+M +S + P++F  S  I++   L 
Sbjct: 176 GVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD 235

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+E G  +H   +  GF  +  V  S+++MY+K G I ++  +F++M   + ++WNAMI+
Sbjct: 236 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 295

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    G   +   LF +M+     P+ +T  S  KA G L  V  G ++       G   
Sbjct: 296 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 355

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELF 305
           +V  ++  +L+D Y KCG L +AR VFD   I       W+++I GY+Q     EA+EL+
Sbjct: 356 NV--LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELY 413

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD---TSVSNSIVDMY 362
            Q+ +  +  D +   S+    A    ++ G+ +H    K   GLD    SV+N+I D Y
Sbjct: 414 VQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC--GLDLMVVSVNNAIADAY 471

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG +++  ++F+ M  +++V+WT ++T Y +  L +EA+  F  M  +   P+   + 
Sbjct: 472 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 531

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIE 478
           +VL +C+    +E  ++    LC     K  ++   CI    +D   + G + EA  + +
Sbjct: 532 SVLISCASLCFLEYGRQVHGLLC-----KAGLDTEKCIESALIDMYAKCGSITEAGKVFD 586

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLE 503
            +   P I  W  ++S    HG +E
Sbjct: 587 KIS-NPDIVSWTAIISGYAQHGLVE 610



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+YG Q+HG L K G   +  + + LIDMYAKCG +  A  VFDK+   ++
Sbjct: 534 LISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI 593

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G+ Q+G  +  L LF +M  S +K N  TL   + A      VE G+  +  
Sbjct: 594 VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQ 652

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYS 195
            M+ G+   P + +   IID+  + GR+++A      MP + + + W  ++ G  + G  
Sbjct: 653 QMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV 712

Query: 196 DKGLLLFRKM 205
           + G +  RK+
Sbjct: 713 ELGEIAARKI 722


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/674 (34%), Positives = 371/674 (55%), Gaps = 22/674 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++K G   +  + + L+++YAKCG M  A  VFD +  RNVV WT LM G++QN  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  + +F  M  S   P+ FTLS  + A   L S+  G Q H   +K     +  +GN+
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +  +YSK G ++ + + F     K +I+W  +I+     G +  GL LF +M      P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           +FT TS L  C ++ S   G Q+H      G   +++  I  SLV  Y+KCGC+ EA+ +
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLR--ITNSLVYLYLKCGCIDEAKNL 239

Query: 274 FDLIEQKSVISWSSLILGYAQEENLA-----------EAMELFRQLRERSLQVDGFVLSS 322
           F+ +E K++I+W+++I G+AQ  +LA           EA+ ++ +L     + D F LSS
Sbjct: 240 FNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++ V +  A +EQG+QIHA   K     D  V  ++VDMY KCG I+ A + F +M  + 
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRT 359

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           +++WT +IT + +HG ++ A+ LF  M L    P+ + ++ VL+ACSH+G+V+E+ EYF 
Sbjct: 360 LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE 419

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  + ++KP ++HY C+VD   R GRLDEA ++I+ M V+P+  IW  L++ CR HG+ 
Sbjct: 420 IMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNE 479

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ELG    E LL+L   +   YV++ N++  A  W +   +R+L + + + K+   S + +
Sbjct: 480 ELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISI 539

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD----IQEESKEES 618
             E+H F   +  H    ++H +L ++  R K  LG+       + D      EE    S
Sbjct: 540 KGEVHSFKTNNRLHNHNAELHTLLNDLVDRAK-SLGYEQLENMEVIDDEEEEAEEKAFSS 598

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSEKLA+   L    LN   G  IRV K++ +C DCH+F+K +S       +++D  
Sbjct: 599 AVYHSEKLAVTFGL----LNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGK 654

Query: 679 RFHRFEGGVCSCGD 692
           R H+F  G CSC D
Sbjct: 655 RLHKFVNGQCSCAD 668



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 218/426 (51%), Gaps = 21/426 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +L  CS    +  G Q H  ++K   S D  + N L  +Y+K G ++ +   F +  
Sbjct: 84  LSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETG 143

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E++V+SWT ++     NG A   L LF +M   +V+PN+FTL++ +     + S + GMQ
Sbjct: 144 EKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQ 203

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA-- 192
           +H +  K G E N  + NS++ +Y KCG I+EA  +F+ M  K+LITWNAMIAG+  A  
Sbjct: 204 VHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMD 263

Query: 193 ----GYS-----DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
                +S      + L ++ K+   G  PD FT +S L  C  L ++  G QIH   I S
Sbjct: 264 LAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKS 323

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           GF   V  V+  +LVD Y KCG +  AR+ F  +  +++ISW+S+I  +A+      A++
Sbjct: 324 GFLSDV--VVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQ 381

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVD 360
           LF  +R    + +      ++   +   +V++     +I     K+   +D      +VD
Sbjct: 382 LFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDH--YGCLVD 439

Query: 361 MYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           M+++ G +DEA ++   M V+ N   W ++I G   HG   E +G +    L  ++P   
Sbjct: 440 MFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG--NEELGFYAAEQLLKLKPRST 497

Query: 420 AYLAVL 425
               VL
Sbjct: 498 ETYVVL 503


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/677 (33%), Positives = 360/677 (53%), Gaps = 42/677 (6%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LI +    G+ N A  +FD + + +  + + L+     +G +   + ++  +    +KP+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
                   KA  V        ++H    + G   +  VGN++I  Y KC  +  A R+FD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            +  + +++W ++ + YV  G+  KG+ +FR+M   G  P+  T +S L AC  L  +  
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G +IHGF +  G    V   +  +LV  Y KC  + EAR VFDL+  + V+SW+ ++  Y
Sbjct: 284 GKEIHGFAVRHGM--VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 293 AQEENLA-----------------------------------EAMELFRQLRERSLQVDG 317
            + +                                      EA+E+FR++++   + + 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             +SS++   +    +  GK+IH Y  +     D + + +++ MY KCG ++ +  +F+ 
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  K+VV W  +I     HG  KEA+ LF KMLL  V+P+ V +  VLS CSHS LVEE 
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            + F+ +  D  ++P   HYSC+VD   RAGRL+EA   I+ MP++P+ + W  LL+ACR
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 581

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           V+ ++EL +   + L  ++ +NP NYV + NI   A  W+E  ++R L + +G+ K  G 
Sbjct: 582 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 641

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW++V  ++H F  GD ++  ++KI+  L E+ ++MK   G+     Y L DI +E K E
Sbjct: 642 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMA-GYKPDTDYVLQDIDQEEKAE 700

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           SL  HSEKLA+      G LN      IRVFKNLR+CGDCH  IK +SK++ ++ VVRD+
Sbjct: 701 SLCNHSEKLAVAF----GILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDS 756

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC D W
Sbjct: 757 LRFHHFKNGNCSCKDLW 773



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 214/427 (50%), Gaps = 49/427 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H    + G   D+ + N LI  Y KC  + GA  VFD ++ R+VVSWT+L   +++ G
Sbjct: 185 EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCG 244

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + +F +MG S VKPN  T+S+ + A   L  +++G +IHG  ++ G   N  V +
Sbjct: 245 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 304

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLI-------------------------------- 180
           +++ +Y+KC  + EA  +FD+MP + ++                                
Sbjct: 305 ALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRA 364

Query: 181 ---TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
              TWNA+I G +  G S++ + +FRKMQ+ G  P+E T +S L AC    ++  G +IH
Sbjct: 365 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 424

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
            ++        + +  A  L+  Y KCG L  +R VFD++ +K V++W+++I+  A   N
Sbjct: 425 CYVFRHWKVGDLTSTTA--LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN 482

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSN 356
             EA+ LF ++    +Q +    + ++   +   LVE+G QI ++         D +  +
Sbjct: 483 GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 542

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG---YGKHGLAK-EAVGLFRKMLL 411
            +VD+Y + G ++EA +    MP++   + W  ++     Y    LAK  A  LF     
Sbjct: 543 CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF----- 597

Query: 412 DDVEPDG 418
            ++EP+ 
Sbjct: 598 -EIEPNN 603



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 35/365 (9%)

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           +G  +I +    G  N A ++FD +P     T + +I+     G S++ + ++  +QE G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD   F +  KAC   G      ++H      G    V   +  +L+  Y KC C+  
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDV--FVGNALIHAYGKCKCVEG 217

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           ARRVFD +  + V+SW+SL   Y +     + M++FR++    ++ +   +SS++   A+
Sbjct: 218 ARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAE 277

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ GK+IH +A +    ++  V +++V +Y KC  + EA  +F+ MP ++VV+W  +
Sbjct: 278 LKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGV 337

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           +T Y K+   ++   LF KM  D V  D   + AV+  C  +G  EE+ E F ++     
Sbjct: 338 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM----- 392

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
                                       + M  KP+     ++L AC    +L +G+E+ 
Sbjct: 393 ----------------------------QKMGFKPNEITISSILPACSFSENLRMGKEIH 424

Query: 510 EILLR 514
             + R
Sbjct: 425 CYVFR 429



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 41/309 (13%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G ++HG  V+ G   +L + + L+ +YAKC  +  A  VFD M  R+V
Sbjct: 272 LPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV 331

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSV----------------------------- 109
           VSW  ++  + +N   +   SLF +M    V                             
Sbjct: 332 VSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRK 391

Query: 110 ------KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                 KPNE T+S+ + A     ++  G +IH    +     +     +++ MY+KCG 
Sbjct: 392 MQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD 451

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +N +  +FD+M  K ++ WN MI    + G   + L LF KM      P+  TFT  L  
Sbjct: 452 LNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSG 511

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFD-LIEQK 280
           C     V  G QI     + G  + V+        +VD Y + G L EA +    +  + 
Sbjct: 512 CSHSRLVEEGVQIFN---SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 568

Query: 281 SVISWSSLI 289
           +  +W +L+
Sbjct: 569 TASAWGALL 577



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 137/298 (45%), Gaps = 14/298 (4%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           ++    P ++ + +   L+   +  G    AR++FD I Q    + S+LI          
Sbjct: 87  MVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSN 146

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA++++  L+ER ++ D  V  +     A      + K++H  A +     D  V N+++
Sbjct: 147 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALI 206

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y KC  ++ A  +F+++ V++VV+WT + + Y K G  ++ + +FR+M    V+P+ +
Sbjct: 207 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 266

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
              ++L AC+    ++  +E          M   +   S +V    +   + EA+ + + 
Sbjct: 267 TVSSILPACAELKDLKSGKEIHG-FAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 325

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           MP +  ++ W  +L+A   + + E G     + L++  D          + AD  +WN
Sbjct: 326 MPHRDVVS-WNGVLTAYFKNKEYEKG---FSLFLKMSRD---------GVRADEATWN 370



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  CS +  L  G ++H  + +     DL     L+ MYAKCG++N +  VFD M 
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV+W  ++     +GN K  L LF +M  S V+PN  T +  +        VE G+Q
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           I + M      E +    + ++D+YS+ GR+NEA +    MP +   + W A++A 
Sbjct: 524 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSN----SIVDMYLKCGLIDEATELFNEMPVK 381
           V   F L    + + +  A VP  L T++ +     ++ + L  G  + A +LF+ +P  
Sbjct: 68  VLKRFELSNGAEFLLSTEAMVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQP 127

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           +  T + +I+    HGL+ EA+ ++  +    ++PD   +LA   AC+ SG
Sbjct: 128 DPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 178


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/608 (34%), Positives = 352/608 (57%), Gaps = 4/608 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A + R C+     + G QLH   +K  F +D ++    +DMYAKC  M  A  VF+   
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
                S  AL+ G+ +       L +F  +  S +  +E +LS  + A   +     G+Q
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG+ +K G ++N  V N+I+DMY+KCG + EA  +FD M  K  ++WNA+IA +    +
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEH 453

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF  M      PD++TF S +KAC    ++  G ++HG +I SG    +   + 
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM--GLDWFVG 511

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +++D Y KCG LVEA ++ + +E+++ +SW+S+I G++ E+    A+  F ++ +  + 
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D F  ++++ + A+ A VE GKQIH    K+    D  ++++IVDMY KCG + ++  +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F + P ++ VTW+ +I  Y  HGL ++A+ LF +M L +V+P+   +++VL AC+H G V
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++   YF  + +   + P++EHYSC+VD LGR+G+++EA  LIESMP +    IW+TLL 
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
            CR+ G++E+  +    LL+LD  +   YV++SN++A AG W E  ++R   ++  LKK 
Sbjct: 752 ICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKE 811

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
            G SW++V  E+H F  GD  HP +E+I+Q    +   MK + G+V  +   L D +E  
Sbjct: 812 PGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWD-GYVPEIDGFLLD-EEVD 869

Query: 615 KEESLRVH 622
           +++S   H
Sbjct: 870 EQDSYEGH 877



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 273/519 (52%), Gaps = 13/519 (2%)

Query: 19  LRCCSKNLLLDYGV--QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           L+ C+   + DYG+  Q+H   ++MGF  D++    L+DMY+ C +++ A  +F +M ER
Sbjct: 177 LKACTG--IEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPER 234

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N V W+A++ G+++N      L L+  M    +  ++ T ++  ++   LS+ E G Q+H
Sbjct: 235 NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLH 294

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K+ F ++ +VG + +DMY+KC R+ +A ++F+  P  +  + NA+I GY       
Sbjct: 295 AYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVL 354

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L +FR +Q+     DE + +  L AC ++     G Q+HG  +  G  +++   +A +
Sbjct: 355 EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNI--CVANT 412

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++D Y KCG L+EA  +FD +E K  +SW+++I  + Q E++ E + LF  +   +++ D
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPD 472

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            +   S++   A    +  G ++H    K   GLD  V ++I+DMY KCG++ EA ++  
Sbjct: 473 DYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHE 532

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  +  V+W  II+G+      + A+  F +ML   V PD   Y  VL  C++   VE 
Sbjct: 533 RLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVEL 592

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++   ++    ++   +   S IVD   + G + +++ + E  P K     W  ++ A 
Sbjct: 593 GKQIHGQILK-LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAY 650

Query: 497 RVHGDLELGREVGEIL--LRLDGDNPVNYVMMSNIHADA 533
             HG   LG +  ++   ++L    P + + +S + A A
Sbjct: 651 AYHG---LGEDAIKLFEEMQLQNVKPNHTIFISVLRACA 686



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 258/504 (51%), Gaps = 35/504 (6%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS    ++ G Q H  +   GF   + ++N L+  Y KC  +N A  VFDKM +R+V+SW
Sbjct: 48  CSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISW 107

Query: 82  TALMCGF-------------------------------LQNGNAKACLSLFCQMGSSSVK 110
             ++ G+                               LQNG  +  + +F +M    ++
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  T +  +KA   +     G+Q+H + ++ GF+ + V G +++DMYS C +++ A  +
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNI 227

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  MP ++ + W+A+IAGYV      +GL L++ M + G    + TF S  ++C  L + 
Sbjct: 228 FCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF 287

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             GTQ+H + + + F Y    ++  + +D Y KC  +V+AR+VF+     +  S ++LI+
Sbjct: 288 ELGTQLHAYALKTNFGYD--NIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIV 345

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYA+++ + EA+E+FR L++  L  D   LS  +   +      +G Q+H  A K     
Sbjct: 346 GYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDF 405

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +  V+N+I+DMY KCG + EA  +F++M +K+ V+W  II  + ++   +E + LF  ML
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSML 465

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
              +EPD   + +V+ AC+    +    E   R+     M       S I+D   + G L
Sbjct: 466 RSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGSAIIDMYCKCGML 524

Query: 471 DEAKNLIESMPVKPSIAIWQTLLS 494
            EA+ + E +  + +++ W +++S
Sbjct: 525 VEAEKIHERLEERTTVS-WNSIIS 547



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 203/464 (43%), Gaps = 39/464 (8%)

Query: 104 MGSSSVKPNE-FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           + S+ + P +  T S   +    L ++  G Q H     +GF     V N ++  Y KC 
Sbjct: 28  ISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL 87

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG------------- 209
            +N A  +FD MP + +I+WN MI GY   G  +    LF  M E               
Sbjct: 88  NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQ 147

Query: 210 -----------------EIPDEF-TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                            EI  ++ TF   LKAC  +   G G Q+H   I  GF   V  
Sbjct: 148 NGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDV-- 205

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           V   +LVD Y  C  L  A  +F  + +++ + WS++I GY + +   E ++L++ + + 
Sbjct: 206 VTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDE 265

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            + V     +S     A  +  E G Q+HAYA K   G D  V  + +DMY KC  + +A
Sbjct: 266 GMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDA 325

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH- 430
            ++FN  P     +   +I GY +     EA+ +FR +    ++ D ++    L+ACS  
Sbjct: 326 RKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI 385

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            G +E  Q     L     +   I   + I+D   + G L EA  + + M +K +++ W 
Sbjct: 386 KGYLEGIQ--LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS-WN 442

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            +++A   +  +E    +   +LR   + P +Y   S + A AG
Sbjct: 443 AIIAAHEQNEHVEETLALFVSMLRSTME-PDDYTFGSVVKACAG 485


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/684 (34%), Positives = 378/684 (55%), Gaps = 22/684 (3%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS+   L  G  +H   V  G +  + ++N L+ MYA+CG+M  A  VFD   ER+ VSW
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVEN-GMQIHGMC 139
            +L+ G+L+ G  +  L +F  M   ++  N F L + IK  SG   SV      +HG  
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCV 243

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY------VLAG 193
           +K+G + +  + ++++DMY+K G ++EA  +F  +   +++ +NAMIAG       V   
Sbjct: 244 VKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKE 303

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L L+ ++Q  G  P EFTF+S ++AC   G +  G QIHG ++   F       I
Sbjct: 304 VVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCF--QGDDFI 361

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+D Y    C+ +  R F  + ++ V++W+++I G  Q E    A+ LF +L    L
Sbjct: 362 GSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGL 421

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEA 371
           + D F +SS+M   A  A+V  G+Q+  +A K  SG D  T++ NS + MY + G ++ A
Sbjct: 422 KPDPFTISSVMNACASLAVVRTGEQMQCFATK--SGFDRFTAMGNSCIHMYARSGNVEAA 479

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            + F EM   +VV+W+ II+ + +HG A++A+  F +M+   V P+ + +L VL+ACSH 
Sbjct: 480 IQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHG 539

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV+E   Y+  +  +  + P ++H +C+VD LGRAGRL +A+  I          +WQ+
Sbjct: 540 GLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQS 599

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL +CR+H D+E G+ V + ++ L   +   YV + N++ DAG  +   ++R L + +G+
Sbjct: 600 LLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGV 659

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G SW+E+   IH F  GD +HP    I+  L EM  ++ +           +  ++
Sbjct: 660 KKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDK---LTTTDTSCIEWVE 716

Query: 612 EESKEES-LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
              +E++ +  HSEKLA+ L ++    +      IRV KNLRVC DCH  +K +SK    
Sbjct: 717 TTGREQNWMNCHSEKLAVALGII----HLPQSAPIRVMKNLRVCRDCHSTMKLISKSECR 772

Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
             ++RD  RFH F  G CSCGDYW
Sbjct: 773 EIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 242/495 (48%), Gaps = 22/495 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK--CGEMNGACAVFDKMLER 76
           LR C+    L     +HG + +   S  L L N L+  Y +   G+ + A  + D+M  R
Sbjct: 20  LRSCAS---LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           N VS+  L+  + + G  +  L  F     ++ VK + FT +  + A      ++ G  +
Sbjct: 77  NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H + +  G      V NS++ MY++CG + EA R+FDV   +  ++WN++++GY+  G  
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAH 196

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGG-GTQIHGFLITSGFPYSVKTVI 253
           ++ L +F  M+      + F   S +K C G  GSV G    +HG ++ +G    +   +
Sbjct: 197 EEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL--FL 254

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN------LAEAMELFRQ 307
           A ++VD Y K G L EA  +F  +   +V+ ++++I G  ++E       + EA+ L+ +
Sbjct: 255 ASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSE 314

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+ R ++   F  SS++        +E GKQIH    K     D  + ++++D+Y     
Sbjct: 315 LQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSAC 374

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +++    F  +P ++VVTWT +I+G  ++ L + A+ LF ++L   ++PD     +V++A
Sbjct: 375 MEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNA 434

Query: 428 CSHSGLVE--ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           C+   +V   E  + F+      R        SCI     R+G ++ A    + M     
Sbjct: 435 CASLAVVRTGEQMQCFATKSGFDRFTAMGN--SCI-HMYARSGNVEAAIQRFQEMESHDV 491

Query: 486 IAIWQTLLSACRVHG 500
           ++ W  ++S+   HG
Sbjct: 492 VS-WSAIISSHAQHG 505


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/700 (33%), Positives = 385/700 (55%), Gaps = 45/700 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLER---NVVSWTALMCG 87
           Q+H  ++K G +  + + + LI   A    G+++ A ++F++  +    NV  W +L+ G
Sbjct: 46  QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRG 105

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  + +  + L LF +M    V+PN  T     K+     +   G Q+H   +K    +N
Sbjct: 106 YSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFN 165

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV----------------- 190
           P V  S+I MY+  G ++ A  +FD    +  +++ A+I GYV                 
Sbjct: 166 PHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPV 225

Query: 191 ---------LAGYSDKG-----LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
                    ++GY   G     ++ F +MQE   +P++ T    L ACG   S   G  I
Sbjct: 226 KDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWI 285

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
             ++  +GF  +++  +  +L+D Y KCG    AR +FD IE+K VISW+++I GY+   
Sbjct: 286 GSWVRDNGFGSNLQ--LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLS 343

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK-VPSGLDTSVS 355
              EA+ LF  +   +++ +      ++   A    ++ GK +HAY  K + +  + S+ 
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW 403

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV- 414
            S++DMY KCG I+ A  +F  M  +N+ +W  +++G+  HG A+ A+ LF +M+   + 
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            PD + ++ VLSAC+ +GLV+   +YF  +  D  + P+++HY C++D L RA + +EA+
Sbjct: 464 RPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAE 523

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            L+++M ++P  AIW +LLSAC+ HG +E G  V E L +L+ +N   +V++SNI+A AG
Sbjct: 524 ILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAG 583

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W++  R+R     KG+KKV G + +E+D ++H F  GD  HP    I+++L E++K + 
Sbjct: 584 RWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLL- 642

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           EE GFV      L+D+ EE KE +L  HSEKLAI   L++     +PG  IR+ KNLRVC
Sbjct: 643 EENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIK----TKPGTTIRIVKNLRVC 698

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G+CH   K +SKI     + RD  RFH F+ G CSC D W
Sbjct: 699 GNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/600 (36%), Positives = 340/600 (56%), Gaps = 38/600 (6%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR---------------------- 163
           L S+  G Q+H + + SG   +  + N +++ YSK G+                      
Sbjct: 75  LGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNIL 134

Query: 164 ---------INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                    +  A ++FD M  +++ TWNAMIAG     ++ + L LF++M   G +PDE
Sbjct: 135 INGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDE 194

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
           FT  S L+ C  L S+  G ++H  L+  GF  S  +V+  SL   Y+K G L +  ++ 
Sbjct: 195 FTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELS--SVVGSSLAHMYIKSGSLSDGEKLI 252

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             +  ++V++W++LI G AQ     E +  +  ++    + D     S++   ++ A + 
Sbjct: 253 KSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLG 312

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           QG+QIHA   K  +    +V +S++ MY + G ++++ + F +    +VV W+ +I  YG
Sbjct: 313 QGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYG 372

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
            HG  +EA+ LF +M    +E + V +L++L ACSHSGL E+  EYF  +    ++KPRI
Sbjct: 373 FHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRI 432

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY+C+VD LGRAGRL+EA+ +I SMPV+P   IW+TLL+AC++H + E+   + E +++
Sbjct: 433 EHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           LD  +  +YV++SNIHA A +W    ++RK  R + ++K  G SW+E+   +H F  GD 
Sbjct: 493 LDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDK 552

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
           +HP   +I   L E+   +K+  G+V  +   LHD+  E KE +L  HSEK AI  AL  
Sbjct: 553 SHPQYFEIDLYLKELMSELKQH-GYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFAL-- 609

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +N      IRV KNLRVC DCH  IK +S+I     +VRDA+RFH F+ G CSCG+YW
Sbjct: 610 --MNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 68/394 (17%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D   F+  L++C  LGS+ GG Q+H  +ITSG   S    I+  L++FY K G    +  
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSG--GSKDKFISNHLLNFYSKLGQFKSSLV 118

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV----------------- 315
           +F  + +++V+S++ LI GY Q  +L  A +LF ++ ER++                   
Sbjct: 119 LFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQA 178

Query: 316 --------------DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
                         D F L S++   A    +  G+++HA   K    L + V +S+  M
Sbjct: 179 LSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHM 238

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y+K G + +  +L   MP++ VV W  +I G  ++G  +E +  +  M +    PD + +
Sbjct: 239 YIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITF 298

Query: 422 LAVLSACSHSGLVEESQEYFSRL-----------------------CNDKRMKPRIEH-- 456
           ++VLSACS    + + Q+  + +                       C +  +K  ++   
Sbjct: 299 VSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDREN 358

Query: 457 -----YSCIVDSLGRAGRLDEAKNL---IESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
                +S ++ + G  GR +EA  L   +E + ++ +   + +LL AC   G  E G E 
Sbjct: 359 FDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEY 418

Query: 509 GEILLRLDGDNPV--NYVMMSNIHADAGSWNECE 540
            +++++     P   +Y  + ++   AG   E E
Sbjct: 419 FDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAE 452



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 6/278 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR C+    L  G ++H  L+K GF    ++ + L  MY K G ++    +   M 
Sbjct: 197 LGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMP 256

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R VV+W  L+ G  QNG  +  L+ +  M  +  +P++ T  + + A   L+++  G Q
Sbjct: 257 IRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQ 316

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K+G      V +S+I MYS+ G + ++ + F       ++ W++MIA Y   G 
Sbjct: 317 IHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGR 376

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF +M++     +E TF S L AC   G    GT+    ++     Y +K  I 
Sbjct: 377 GEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKK---YKLKPRIE 433

Query: 255 --GSLVDFYVKCGCLVEAR-RVFDLIEQKSVISWSSLI 289
               +VD   + G L EA   +  +  Q   I W +L+
Sbjct: 434 HYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 471


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 385/736 (52%), Gaps = 66/736 (8%)

Query: 18   SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
            +L+ C++ + +  G+++HG L+K GF  D+ L   L++ Y +C  +  A  VF +M    
Sbjct: 680  ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPE 739

Query: 78   VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
             + W   +   LQ+   +  + LF +M  S +K    T+   ++A G + ++    QIHG
Sbjct: 740  ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 799

Query: 138  MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS------------------- 178
               + G + +  + N +I MYSK G++  A R+FD M  ++                   
Sbjct: 800  YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 859

Query: 179  ----------------LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
                            ++TWN +++G+ L GY ++ L + ++MQ  G  P+  + TS L+
Sbjct: 860  AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQ 919

Query: 223  ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            A   LG +  G + HG+++ +GF   V   +  SL+D YVK   L  A+ VFD ++ +++
Sbjct: 920  AISELGFLNMGKETHGYVLRNGFDCDV--YVGTSLIDMYVKNHSLXSAQAVFDNMKNRNI 977

Query: 283  ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA-------------- 328
             +W+SL+ GY+ +    +A+ L  Q+ +  ++ D    + M+  +A              
Sbjct: 978  FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSA 1037

Query: 329  ----------DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
                        +L+++GK+IH  + +     D  V+ +++DMY K   +  A ++F  +
Sbjct: 1038 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 1097

Query: 379  PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
              K + +W  +I G+   GL KEA+ +F +M    V PD + + A+LSAC +SGL+ E  
Sbjct: 1098 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 1157

Query: 439  EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
            +YF  +  D R+ PR+EHY C+VD LGRAG LDEA +LI +MP+KP   IW  LL +CR+
Sbjct: 1158 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRI 1217

Query: 499  HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
            H +L       + L +L+ +N  NY++M N+++    W + + LR+L  + G++     S
Sbjct: 1218 HKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWS 1277

Query: 559  WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            W+++++ +H F   +  HP   KI+  L ++   MK +LG+V  V     ++ E  K++ 
Sbjct: 1278 WIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMK-KLGYVPDVNCVYQNMDEVEKQKI 1336

Query: 619  LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
            L  H+EKLAI   L++     + G+ IRV KN R+C DCH   K +S +      +RD  
Sbjct: 1337 LLSHTEKLAITYGLIK----MKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGV 1392

Query: 679  RFHRFEGGVCSCGDYW 694
            RFH F  G CSC D+W
Sbjct: 1393 RFHHFREGKCSCNDFW 1408



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 209/460 (45%), Gaps = 84/460 (18%)

Query: 3    RVSFS-LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
            ++ FS L +E   +   L+ C K   L+   Q+HG + + G   D+ L N LI MY+K G
Sbjct: 765  KMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNG 824

Query: 62   EMNGACAVFDKMLERN-----------------------------------VVSWTALMC 86
            ++  A  VFD M  RN                                   +V+W  L+ 
Sbjct: 825  KLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 884

Query: 87   GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            G   +G  +  L++  +M     KPN  ++++ ++A   L  +  G + HG  +++GF+ 
Sbjct: 885  GHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDC 944

Query: 147  NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
            +  VG S+IDMY K   +  A  +FD M  +++  WN++++GY   G  +  L L  +M+
Sbjct: 945  DVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQME 1004

Query: 207  EHGEIPDEFTF------------------------TSTLKACGSLGSVGGGTQIHGFLIT 242
            + G  PD  T+                        T  L+AC SL  +  G +IH   I 
Sbjct: 1005 KEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIR 1064

Query: 243  SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            +GF   V   +A +L+D Y K   L  A +VF  I+ K++ SW+ +I+G+A      EA+
Sbjct: 1065 NGFIEDV--FVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAI 1122

Query: 303  ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN------ 356
             +F ++++  +  D    ++++    +  L+ +G +            D+ +++      
Sbjct: 1123 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY----------FDSMITDYRIVPR 1172

Query: 357  -----SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
                  +VD+  + G +DEA +L + MP+K +   W  ++
Sbjct: 1173 LEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 203/461 (44%), Gaps = 50/461 (10%)

Query: 52   DLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN-GNAKACLSLFCQMGSSSVK 110
            +LI  Y   G+   A  VF   L RN + W + +  F  + G+    L +F ++    V 
Sbjct: 612  NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671

Query: 111  PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
             +    S  +K    +  +  GM+IHG  +K GF+ +  +  ++++ Y +C  + +A ++
Sbjct: 672  FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731

Query: 171  FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
            F  MP    + WN  I   + +    KG+ LFRKMQ      +  T    L+ACG +G++
Sbjct: 732  FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791

Query: 231  GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
                QIHG++   G    V   +   L+  Y K G L  ARRVFD +E ++  SW+S+I 
Sbjct: 792  NAAKQIHGYVFRFGLDSDVS--LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849

Query: 291  GYAQEENLAEAMELFRQLRERSLQVD------------------------------GF-- 318
             YA    L +A  LF +L    ++ D                              GF  
Sbjct: 850  SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 909

Query: 319  ---VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
                ++S++   ++   +  GK+ H Y  +     D  V  S++DMY+K   +  A  +F
Sbjct: 910  NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVF 969

Query: 376  NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + M  +N+  W  +++GY   G+ ++A+ L  +M  + ++PD V +  ++S  +  G   
Sbjct: 970  DNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG--- 1026

Query: 436  ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
                     C  K   P     +C++ +      L + K +
Sbjct: 1027 ---------CARKAFMPNSASITCLLRACASLSLLQKGKEI 1058


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/582 (35%), Positives = 335/582 (57%), Gaps = 2/582 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+   L ++G QLHG ++  GF FD ++ N L+ MY+K G+++ A  +F+ M 
Sbjct: 76  FASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMP 135

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + NVV+W  ++ GF+QNG       LF +M S+ V P+  T ++ + +    +S++ G +
Sbjct: 136 DTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKE 195

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  ++ G   +  + +++ID+Y KC  +  A ++F       ++   A+I+GYVL G 
Sbjct: 196 IHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGL 255

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  L +FR + E    P+  T  S L AC  L ++  G ++H  ++  G     +  + 
Sbjct: 256 NNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGL--DERRHVG 313

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +++D Y KCG L  A ++F  + +K  + W+++I   +Q     EA++LFRQ+    L 
Sbjct: 314 SAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLS 373

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            D   +S+ +   A+   +  GK IH++  K     +    ++++DMY KCG +  A  +
Sbjct: 374 YDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCV 433

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F+ M  KN V+W  II  YG HG  + ++ LF KML D ++PD V +L +LSAC H+G V
Sbjct: 434 FDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQV 493

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++  +YF  +  +  +  R+EHY+CIVD  GRAGRL+EA   I++MP  P   +W TLL 
Sbjct: 494 DKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLG 553

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVHG++EL       LL LD +N   YV++SN+HADAG W    ++R L + +G++KV
Sbjct: 554 ACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKV 613

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            G SW+EV+K  H F   D +HP + +I+ VL  +   +++E
Sbjct: 614 PGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKE 655



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 158/495 (31%), Positives = 269/495 (54%), Gaps = 13/495 (2%)

Query: 41  MGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSL 100
           MGF+ D  + + LI +YA+ G +  A  +FDKM  ++ V W  ++ GF++ G   + + +
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 101 FCQMGSSSVKPNEFTLST--NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
           F  M +   KPN  T ++  +I AS  LS  E G Q+HG+ +  GF ++P+V N+++ MY
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALS--EFGNQLHGLVISCGFHFDPLVANALVAMY 118

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           SK G++++A ++F+ MP  +++TWN MIAG+V  G+ D+  LLF +M   G  PD  TF 
Sbjct: 119 SKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFA 178

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S L +     S+  G +IHG+++  G    V   +  +L+D Y KC  +  A ++F    
Sbjct: 179 SFLPSVTESASLKQGKEIHGYILRHGIALDV--FLKSALIDIYFKCRDVGMACKIFKQST 236

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
              ++  +++I GY       +A+E+FR L E  +  +   L+S++   A  A +  GK+
Sbjct: 237 NVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKE 296

Query: 339 IHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +HA   K   GLD    V ++I+DMY KCG +D A ++F  MP K+ V W  IIT   ++
Sbjct: 297 LHANILK--HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQN 354

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G  +EA+ LFR+M  + +  D V+  A LSAC++   +   +   S +         +  
Sbjct: 355 GKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGA-FDSEVFA 413

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
            S ++D  G+ G L  A+ + + M  K  ++ W ++++A   HG LE+   +   +L  D
Sbjct: 414 ESALIDMYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKMLE-D 471

Query: 517 GDNPVNYVMMSNIHA 531
           G  P +   ++ + A
Sbjct: 472 GIQPDHVTFLTILSA 486


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/677 (33%), Positives = 360/677 (53%), Gaps = 42/677 (6%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LI +    G+ N A  +FD + + +  + + L+     +G +   + ++  +    +KP+
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
                   KA  V        ++H    + G   +  VGN++I  Y KC  +  A R+FD
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            +  + +++W ++ + YV  G+  KG+ +FR+M   G  P+  T +S L AC  L  +  
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G +IHGF +  G    V   +  +LV  Y KC  + EAR VFDL+  + V+SW+ ++  Y
Sbjct: 198 GKEIHGFAVRHGM--VVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 293 AQEENLA-----------------------------------EAMELFRQLRERSLQVDG 317
            + +                                      EA+E+FR++++   + + 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             +SS++   +    +  GK+IH Y  +     D + + +++ MY KCG ++ +  +F+ 
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  K+VV W  +I     HG  KEA+ LF KMLL  V+P+ V +  VLS CSHS LVEE 
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
            + F+ +  D  ++P   HYSC+VD   RAGRL+EA   I+ MP++P+ + W  LL+ACR
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 495

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           V+ ++EL +   + L  ++ +NP NYV + NI   A  W+E  ++R L + +G+ K  G 
Sbjct: 496 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 555

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW++V  ++H F  GD ++  ++KI+  L E+ ++MK   G+     Y L DI +E K E
Sbjct: 556 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMA-GYKPDTDYVLQDIDQEEKAE 614

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
           SL  HSEKLA+      G LN      IRVFKNLR+CGDCH  IK +SK++ ++ VVRD+
Sbjct: 615 SLCNHSEKLAVAF----GILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDS 670

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F+ G CSC D W
Sbjct: 671 LRFHHFKNGNCSCKDLW 687



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 214/426 (50%), Gaps = 49/426 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H    + G   D+ + N LI  Y KC  + GA  VFD ++ R+VVSWT+L   +++ G
Sbjct: 99  EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCG 158

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  + +F +MG S VKPN  T+S+ + A   L  +++G +IHG  ++ G   N  V +
Sbjct: 159 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 218

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLI-------------------------------- 180
           +++ +Y+KC  + EA  +FD+MP + ++                                
Sbjct: 219 ALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRA 278

Query: 181 ---TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
              TWNA+I G +  G S++ + +FRKMQ+ G  P+E T +S L AC    ++  G +IH
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
            ++        + +  A  L+  Y KCG L  +R VFD++ +K V++W+++I+  A   N
Sbjct: 339 CYVFRHWKVGDLTSTTA--LLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN 396

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSN 356
             EA+ LF ++    +Q +    + ++   +   LVE+G QI ++         D +  +
Sbjct: 397 GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 456

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG---YGKHGLAK-EAVGLFRKMLL 411
            +VD+Y + G ++EA +    MP++   + W  ++     Y    LAK  A  LF     
Sbjct: 457 CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF----- 511

Query: 412 DDVEPD 417
            ++EP+
Sbjct: 512 -EIEPN 516



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 35/365 (9%)

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           +G  +I +    G  N A ++FD +P     T + +I+     G S++ + ++  +QE G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD   F +  KAC   G      ++H      G    V   +  +L+  Y KC C+  
Sbjct: 74  IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDV--FVGNALIHAYGKCKCVEG 131

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           ARRVFD +  + V+SW+SL   Y +     + M++FR++    ++ +   +SS++   A+
Sbjct: 132 ARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAE 191

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ GK+IH +A +    ++  V +++V +Y KC  + EA  +F+ MP ++VV+W  +
Sbjct: 192 LKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGV 251

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           +T Y K+   ++   LF KM  D V  D   + AV+  C  +G  EE+ E F ++     
Sbjct: 252 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM----- 306

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
                                       + M  KP+     ++L AC    +L +G+E+ 
Sbjct: 307 ----------------------------QKMGFKPNEITISSILPACSFSENLRMGKEIH 338

Query: 510 EILLR 514
             + R
Sbjct: 339 CYVFR 343



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 131/309 (42%), Gaps = 41/309 (13%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G ++HG  V+ G   +L + + L+ +YAKC  +  A  VFD M  R+V
Sbjct: 186 LPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV 245

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSV----------------------------- 109
           VSW  ++  + +N   +   SLF +M    V                             
Sbjct: 246 VSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRK 305

Query: 110 ------KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
                 KPNE T+S+ + A     ++  G +IH    +     +     +++ MY+KCG 
Sbjct: 306 MQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD 365

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +N +  +FD+M  K ++ WN MI    + G   + L LF KM      P+  TFT  L  
Sbjct: 366 LNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSG 425

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKS 281
           C     V  G QI   +   G  + V+        +VD Y + G L EA +    +  + 
Sbjct: 426 CSHSRLVEEGVQIFNSM---GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 482

Query: 282 VIS-WSSLI 289
             S W +L+
Sbjct: 483 TASAWGALL 491



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 137/298 (45%), Gaps = 14/298 (4%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           ++    P ++ + +   L+   +  G    AR++FD I Q    + S+LI          
Sbjct: 1   MVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSN 60

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA++++  L+ER ++ D  V  +     A      + K++H  A +     D  V N+++
Sbjct: 61  EAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALI 120

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y KC  ++ A  +F+++ V++VV+WT + + Y K G  ++ + +FR+M    V+P+ +
Sbjct: 121 HAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM 180

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
              ++L AC+    ++  +E          M   +   S +V    +   + EA+ + + 
Sbjct: 181 TVSSILPACAELKDLKSGKEIHG-FAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 239

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
           MP +  ++ W  +L+A   + + E G     + L++  D          + AD  +WN
Sbjct: 240 MPHRDVVS-WNGVLTAYFKNKEYEKG---FSLFLKMSRD---------GVRADEATWN 284



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++  L  CS +  L  G ++H  + +     DL     L+ MYAKCG++N +  VFD M 
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 377

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV+W  ++     +GN K  L LF +M  S V+PN  T +  +        VE G+Q
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           I + M      E +    + ++D+YS+ GR+NEA +    MP +   + W A++A 
Sbjct: 438 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/567 (38%), Positives = 327/567 (57%), Gaps = 8/567 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G QIH   +KSG +  P+V + +I+ YSK      ++++F+    KS  TW+++I+
Sbjct: 69  SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         +  F +M      PD+  F S  KAC  LG    G  +H  +I +G  Y
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG--Y 186

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V   +  SLVD Y KCG + EAR VFD +  ++V+SWS +I GY Q     EAM LF++
Sbjct: 187 DVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKE 246

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
                L V+ F LSS++ V     L+E GKQIH    K    L   V +S++ +Y KCGL
Sbjct: 247 ALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGL 306

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I+ A  +F+E+P+KN+  W  ++    +H   KEA  LF KM    + P+ + +L VL A
Sbjct: 307 IEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYA 366

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GLVEE ++YF+ L     ++P  +HY+ +VD LGRAG+L EA ++I+ MP +P+ +
Sbjct: 367 CSHAGLVEEGKKYFA-LMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTES 425

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W   ++ CR+HG+ +L     + +  L   +   +VM+SN +A AG + +  + RK+ R
Sbjct: 426 VWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLR 485

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+KK  G SW+E    +H F  GD  H   ++I+Q L ++ + M E  G+V    + L
Sbjct: 486 DRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEM-ERAGYVADTSFVL 544

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            ++  E K +++R HSE+LAI   L+   L    G+ IR+ KNLRVCGDCH  IK +SK+
Sbjct: 545 REVGSEEKNQTIRYHSERLAIAFGLISIPL----GRPIRIMKNLRVCGDCHNAIKFISKL 600

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
              V +VRD  RFHRFE G CSC DYW
Sbjct: 601 SGRVIIVRDNNRFHRFEDGKCSCADYW 627



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 199/384 (51%), Gaps = 3/384 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           + D L   +++  L  G Q+H  ++K G     ++ + LI+ Y+K      +  VF++  
Sbjct: 57  ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESE 116

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++  +W++++  F QN      +  FC+M   ++ P++    +  KA  +L   + G  
Sbjct: 117 RKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKS 176

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + +K+G++ +  VG+S++DMY+KCG I EA  +FD MP +++++W+ MI GY   G 
Sbjct: 177 VHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGE 236

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ + LF++    G   ++FT +S ++ CGS   +  G QIHG    +   Y +   + 
Sbjct: 237 HEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTS--YDLSGFVG 294

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SL+  Y KCG +  A RVFD +  K++  W+++++  AQ  +  EA +LF ++    ++
Sbjct: 295 SSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMR 354

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +      ++   +   LVE+GK+  A   K      T    S+VD+  + G + EA  +
Sbjct: 355 PNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSV 414

Query: 375 FNEMPVKNVVT-WTVIITGYGKHG 397
              MP +   + W   ITG   HG
Sbjct: 415 IKGMPTEPTESVWGAFITGCRIHG 438


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/543 (39%), Positives = 321/543 (59%), Gaps = 15/543 (2%)

Query: 157 MYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEF 215
           MY+KCG   +  ++FD M  K L+ W AMI  Y  A   ++ L+LF+KMQ E G + D  
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
              S   A G LG V     +HG+         +   +  S++  + KCG   +AR VFD
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEEL--CVGNSILAMHTKCGNTEKARLVFD 118

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
           ++ ++ VISW+S++ GY Q     EA+ LF ++R+   Q        M+   A       
Sbjct: 119 MMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHL 178

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVIITGY 393
           G++ H +       +DT++SN+++DMY KCG +++A +LFN +P   +N  +W V+I+GY
Sbjct: 179 GRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
           G HG  KEA+ LF +M  + VEP+   + ++LSACSH+GL++E ++ F+ +   KR+   
Sbjct: 239 GMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEM---KRLSVT 295

Query: 454 IE--HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           +E  H++C+VD LGRAG L EA +LI+ MP  PS  +W  LL AC++HG++ELG+     
Sbjct: 296 LEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASN 355

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           LL+L+ ++   YV+MSNI+A +  W E  +LR+  ++KGLKK A  S +E  K+I  F+ 
Sbjct: 356 LLQLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHT 415

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
            D  +P   ++++ +  +   MK   G+V  +  ALHD++EE KE  L  HSEKLA+   
Sbjct: 416 ADQENPYRHEVYKKMESLAIEMKMA-GYVPDLSCALHDVEEEDKERMLNYHSEKLAVAF- 473

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
              G L   PG VIRV KNLRVC DCH   K +S I +   +VRDA RFH F+GG CSC 
Sbjct: 474 ---GVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCK 530

Query: 692 DYW 694
           DYW
Sbjct: 531 DYW 533



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 14/378 (3%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEF 114
           MYAKCG       +FD+M  +++V WTA++  + Q    +  L LF +M     +  +  
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
            + +   A G L  V+N   +HG   +        VGNSI+ M++KCG   +A  +FD+M
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
             + +I+WN+M++GY   G + + LLLF +M++    P   T    + AC  LG    G 
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE--QKSVISWSSLILGY 292
           + H F++ S     + T ++ +L+D Y KCG L +A  +F+ I   +++  SW+ LI GY
Sbjct: 181 KFHDFIVDSRM--EIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
               +  EA+ELF +++E  ++ + F  +S++   +   L+++G++  A   ++   L+ 
Sbjct: 239 GMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLED 298

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHG---LAKEAVGLFRK 408
                +VDM  + GL+ EA +L  EMP   +   W  ++     HG   L K A     +
Sbjct: 299 KHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQ 358

Query: 409 MLLDDVEPDGVAYLAVLS 426
           +     EP+   Y  ++S
Sbjct: 359 L-----EPNHTGYYVLMS 371



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 15/289 (5%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +HG   +     +L + N ++ M+ KCG    A  VFD M+ER+V+SW +++ G+ QNG 
Sbjct: 81  VHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQ 140

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           A   L LF +M  S  +P   T    + A   L     G + H   + S  E +  + N+
Sbjct: 141 ATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNA 200

Query: 154 IIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++DMY+KCG + +A  +F+ +P   ++  +WN +I+GY + G+  + L LF +MQE G  
Sbjct: 201 LMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVE 260

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P+ FTFTS L AC   G +  G +   F        +++      +VD   + G L EA 
Sbjct: 261 PNHFTFTSILSACSHAGLIDEGRKC--FAEMKRLSVTLEDKHHACVVDMLGRAGLLQEA- 317

Query: 272 RVFDLIEQ----KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
             FDLI++     S   W +L+L      N    MEL +      LQ++
Sbjct: 318 --FDLIKEMPSPPSDGVWGALLLACKIHGN----MELGKTAASNLLQLE 360



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 3/171 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGF 88
           G + H  +V      D  L+N L+DMYAKCG++  A  +F+ +   ERN  SW  L+ G+
Sbjct: 179 GRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             +G+ K  L LF +M    V+PN FT ++ + A      ++ G +      +       
Sbjct: 239 GMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLED 298

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKG 198
                ++DM  + G + EA  +   MP+  S   W A++    + G  + G
Sbjct: 299 KHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELG 349


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 381/717 (53%), Gaps = 53/717 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C + L L+ G QLH  ++KMGF     ++N L+ +Y KCG ++    +FD+M  R++
Sbjct: 178 LTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDI 237

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  ++   ++    +    LF  M      + + FTLST + A+  L+S+  G +IH 
Sbjct: 238 ASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHA 296

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINE------------------------------- 166
             +K GFE N  V N++I  Y+KCG I                                 
Sbjct: 297 HVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDL 356

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD MPA++ I++NA+++G+   G   K L  F +M E G    +FT T  L ACG 
Sbjct: 357 ALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGL 416

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV--IS 284
           L       QIHGF++  GF       I  +L+D   +CG + +A+++F          I 
Sbjct: 417 LMEAKISKQIHGFILKFGF--GSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSII 474

Query: 285 WSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           W+S+I GYA+     EA+ LF Q + E ++ VD    ++++GV    A  E GKQIH +A
Sbjct: 475 WTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHA 534

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D  V NSI+ MY KC  +D+A ++FN MP  ++V+W  +I G+  H    EA+
Sbjct: 535 LKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEAL 594

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            ++ KM    ++PD V ++ ++SA  H  S LV+  +  F  +     + P +EHY+ +V
Sbjct: 595 SVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLV 654

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
             LG  G L+EA+ +I  MP++P  ++W+ LL ACR+H +  +G+   + LL +   +P 
Sbjct: 655 GVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPS 714

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            Y+++SN+++  G W+  + +R+  R KG +K  GRSW+  + ++H FY  D +HP  + 
Sbjct: 715 TYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKD 774

Query: 582 IHQ----VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
           IH     ++ME  K      G+V    + LH+++E  K++ L  HS K+A    L    L
Sbjct: 775 IHSGLELLIMECLKA-----GYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGL----L 825

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +PG+ IR+ KN+ +CGDCH F+K +S +      +RDA+  H F  G CSC DYW
Sbjct: 826 MTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 249/550 (45%), Gaps = 51/550 (9%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H ++ K+  + D+ L N LI  Y K G +  A  VF  +   NVVS+TA++ GF ++  
Sbjct: 94  VHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 151

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  + +F +M SS ++ NEF+    +     L  +E G Q+H + +K GF     V N+
Sbjct: 152 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA 211

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE-HGEIP 212
           ++ +Y KCG ++   ++FD MP + + +WN +I+  V     ++   LFR M+   G   
Sbjct: 212 LMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRI 271

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT ++ L A   L S+  G +IH  +I  GF  ++  +   +L+ FY KCG +     
Sbjct: 272 DHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVI--NALIRFYTKCGSIKHVVA 328

Query: 273 VFDLIEQKSVISWSSLIL-------------------------------GYAQEENLAEA 301
           +F+ +  + VI+W+ +I                                G+ Q    ++A
Sbjct: 329 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKA 388

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           +  F ++ E  +++  F L+ ++         +  KQIH +  K   G +  +  +++DM
Sbjct: 389 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 448

Query: 362 YLKCGLIDEATEL--FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF-RKMLLDDVEPDG 418
             +CG + +A ++           + WT +I GY ++   +EA+ LF +  L   +  D 
Sbjct: 449 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 508

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           VA  AVL  C      E  ++          +   +   + I+    +   +D+A  +  
Sbjct: 509 VASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSD-LGVGNSIITMYSKCSNMDDAIKVFN 567

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD--GDNP--VNYVMMSNI--HAD 532
            MP    I  W  L++   +H     G E   +  +++  G  P  V +V++ +   H +
Sbjct: 568 VMPAH-DIVSWNGLIAGHLLHRQ---GDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTN 623

Query: 533 AGSWNECERL 542
           +   + C RL
Sbjct: 624 SNLVDNCRRL 633


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/725 (31%), Positives = 379/725 (52%), Gaps = 81/725 (11%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFD--KMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           D +    LI  Y   G +     +F+   +  R+ V + A++ G+  NG+  + L LF  
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGM-QIHGMCMKSGFEW-NPVVGNSIIDMYSK- 160
           M     +P++FT ++ + A  +    E    Q+H   +K+G    +  V N+++ +Y K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 161 -------CGRINEAARMFDVMPAKSLIT-------------------------------W 182
                  C  +  A ++FD MP +  +T                               W
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NAMI+GYV  G   + L L RKM+  G   D+ T+T+ + AC ++GS   G Q+H +++ 
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317

Query: 243 SGF--PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +     +S    ++ +L+  Y K   + EAR++F  +  +++I+W++++ GY     + E
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 301 A-------------------------------MELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A                               ++LF+Q+R    +   F  +  +   + 
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +E G+Q+HA    +      SV N+++ MY KCG+++ A  +F  MP  ++V+W  +
Sbjct: 438 LGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSM 497

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G+HG   +A+ LF +ML + V PD + +L VL+ACSH+GLVE+ + YF+ +     
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P  +HY+ +VD   RAG    A+ +I+SMP KP   +W+ LL+ CR+HG+++LG E  
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E L +L   N   YV++SNI+AD G WN+  ++RKL R + ++K    SW+EV+ ++H F
Sbjct: 618 EQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVF 677

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              DD HP    +++ L ++   MK +LG++   K+ LHD++ E KE +L  HSEKLA+G
Sbjct: 678 MVDDDVHPEVLSVYRYLEQLGLEMK-KLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVG 736

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             +++      P   +RVFKN+R+CGDCH   K +SK+ +   +VRD  RFH F+ G CS
Sbjct: 737 FGIMK----LPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCS 792

Query: 690 CGDYW 694
           C DYW
Sbjct: 793 CRDYW 797



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 8/201 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +L  CS    L+ G QLH  LV +G+   L + N +I MYAKCG +  A +VF  M 
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VSW +++    Q+G+    + LF QM    V P+  T  T + A      VE G  
Sbjct: 488 SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRH 547

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
                ++S +   P   +   ++D++ + G  + A  + D MP+K     W A++AG  +
Sbjct: 548 YFNSMLES-YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606

Query: 192 AGYSDKGL----LLFRKMQEH 208
            G  D G+     LF+ M ++
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQN 627



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 24/212 (11%)

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
           G  L+ ++ ++   + V   +Q+     ++P+  D     +++  Y   G ++   E+FN
Sbjct: 48  GHFLNRLLEMYCKSSNVVYARQLFE---EIPNP-DAIARTTLITAYCALGNLELGREIFN 103

Query: 377 EMPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA------- 427
             P+  ++ V +  +ITGY  +G    A+ LFR M  DD  PD   + +VLSA       
Sbjct: 104 GTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGN 163

Query: 428 ---CS--HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG-RAGRLDEAKNLIESMP 481
              C   H  +V+      S    +  +   ++  S     LG     +  A+ L + MP
Sbjct: 164 EQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRAS----ELGIPCSAMVSARKLFDEMP 219

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
            +  +  W T+++    + DL   REV E ++
Sbjct: 220 KRDELT-WTTMITGYVRNDDLNGAREVFEAMV 250


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/656 (34%), Positives = 354/656 (53%), Gaps = 36/656 (5%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VFD++ +RN  SW+ L+  ++QN   +  L ++ +M    +  + +TLS+ + A   L  
Sbjct: 4   VFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLD 63

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA------------ 176
           VE G  +     + GFE + VV  S+I +++KCG + EA  +F  M A            
Sbjct: 64  VEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIG 123

Query: 177 ------------------KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
                             K +++WNAMIA Y L G+      LF +M   G  PD +TF+
Sbjct: 124 AYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFS 183

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S L AC S   +  G  +H  +   GF       +  +L+  Y +CG L  ARR F  IE
Sbjct: 184 SILGACASPKRLEDGRMLHVRITARGFDRDF--AMQNNLISMYTRCGSLESARRYFYSIE 241

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           +K + +W++++  YAQ +   +A+ L++ +       D F  SS++   A    + +GK 
Sbjct: 242 KKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKF 301

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH  +       D  +  ++V+MY KCG + +A + F+ +  K+VV+W+ +I    +HG 
Sbjct: 302 IHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGH 361

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           A+EA+ L   M L  +  + V   +VL ACSH G + E  +YF  L  D  ++   E+  
Sbjct: 362 AEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTV 421

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
             +D LGRAG L EA++++ +MP K S     TLL  C+VHGD+  G+   + ++ L+ +
Sbjct: 422 GFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPE 481

Query: 519 NPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPL 578
           NP +YV+++N++A AG W++  +LR+  R KG+K+  G S +E   +I+ F  GD ++P 
Sbjct: 482 NPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPR 541

Query: 579 TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLN 638
             +I   L  +  RMKEE G+V   +   HD+ ++ KEE L+ HSEK+A+G  L+     
Sbjct: 542 NLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLI----T 597

Query: 639 EQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             PG  +R+ KNLRVC DCH   K  SKI     +VRD TRFH FEGG+CSCGDYW
Sbjct: 598 SPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 36/437 (8%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+K L ++ G  +     ++GF  D+++   LI ++AKCG +  A +VF  M 
Sbjct: 51  LSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMG 110

Query: 75  E------------------------------RNVVSWTALMCGFLQNGNAKACLSLFCQM 104
                                          ++VVSW A++  +   G+ K   SLF +M
Sbjct: 111 AMRDIISVTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRM 170

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
            +    P+ +T S+ + A      +E+G  +H      GF+ +  + N++I MY++CG +
Sbjct: 171 CTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSL 230

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             A R F  +  K L  WN M+A Y         L L++ M   G  PD FTF+S + +C
Sbjct: 231 ESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSC 290

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            SLG++  G  IH    + GF   V  ++  +LV+ Y KCG L +A++ FD I  K V+S
Sbjct: 291 ASLGALREGKFIHECSTSCGFEKDV--ILGTALVNMYAKCGSLADAKKSFDGISNKDVVS 348

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           WS++I   AQ  +  EA+EL   +  + +  +    SS++   +    + +G   +    
Sbjct: 349 WSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGID-YFMGL 407

Query: 345 KVPSGLDTSVSNSI--VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKE 401
               G++    N++  +D+  + G + EA  + + MP K + V    ++ G   HG  + 
Sbjct: 408 SQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRR 467

Query: 402 AVGLFRKMLLDDVEPDG 418
                ++++  + E  G
Sbjct: 468 GKAFTKRIVALEPENPG 484



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 174/396 (43%), Gaps = 37/396 (9%)

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A ++FD +  ++  +W+ ++  YV      + L ++++M       D +T +S L AC  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-------DLI-- 277
           L  V  G  +       GF   V  V+A SL+  + KCGCL EA  VF       D+I  
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDV--VVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISV 118

Query: 278 ---------------------EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
                                + K V+SW+++I  Y    +  +A  LF ++       D
Sbjct: 119 TAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPD 178

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            +  SS++G  A    +E G+ +H          D ++ N+++ MY +CG ++ A   F 
Sbjct: 179 IYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFY 238

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K +  W  ++  Y +    K+A+ L++ MLL+   PD   + +V+ +C+  G + E
Sbjct: 239 SIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298

Query: 437 SQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
            +  F   C+     +  +   + +V+   + G L +AK   + +  K  ++ W  +++A
Sbjct: 299 GK--FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAA 355

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
              HG  E   E+   L+ L G         S +HA
Sbjct: 356 SAQHGHAEEALELSH-LMNLQGIAQNEVTASSVLHA 390


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/695 (34%), Positives = 381/695 (54%), Gaps = 47/695 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + L++        +G   A +VFD + E N++ W  +  G   
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + P+ +T    +K+       + G QIHG  +K GF+ +  V
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 151 GNSIIDMYSKCGRINEAARMFDV-------------------------------MPAKSL 179
             S+I MY++ GR+ +A ++FD+                               +P K +
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++WNAMI+GYV  G   + L LF++M     + PDE T  + + AC    S+  G  +H 
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           ++   GF  ++K  I  +L+D Y K G +  A  +FD +  K VISW++LI GY      
Sbjct: 247 WINDHGFASNLK--IVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN-- 356
            EA+ LF+++       +   + S++   A    ++ G+ IH Y  K   G+ T+VS+  
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 357 -SIVDMYLKCGLIDEATELFNE-MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            S++DMY KCG ID A ++F+  M  +++ TW  +I+G+  HG A  A  +F +M ++ +
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           EPD + ++ +LSACSHSG+++  +  F  +     + P++EHY C++D LG +G   EA+
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            +I +MP++P   IW +LL AC++HG+LELG    + L++++  N  +YV++SNI+A AG
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAG 544

Query: 535 SWNECERLRKLARSKGL-KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
            WNE  ++R L   KG+ KKV G S +E+D  +H F  GD  HP   +I+ +L EME  +
Sbjct: 545 RWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLL 604

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           +E  GFV      L +++EE +E +LR HSEKLAI   L+    + +PG  + + KNLRV
Sbjct: 605 EEA-GFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLI----STKPGTKLTIMKNLRV 659

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
           C +CHE  K +SKI K   + RD TRF  F  GVC
Sbjct: 660 CKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 240/502 (47%), Gaps = 47/502 (9%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+ +       L+ C+K+ +   G Q+HG ++K+GF  D+ ++  LI MYA+ G +
Sbjct: 81  ISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRL 140

Query: 64  NGACAVFD---------------------------KMLE----RNVVSWTALMCGFLQNG 92
             A  VFD                           K+ +    ++VVSW A++ G+++ G
Sbjct: 141 EDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETG 200

Query: 93  NAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           N K  L LF +M   ++V+P+E T+ T + A     S+E G  +H      GF  N  + 
Sbjct: 201 NYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIV 260

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++ID+YSK G +  A  +FD +  K +I+WN +I GY       + LLLF++M   GE 
Sbjct: 261 NALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 320

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV--IAGSLVDFYVKCGCLVE 269
           P++ T  S L AC  LG++  G  IH + I       V  V  +  SL+D Y KCG +  
Sbjct: 321 PNDVTMLSILPACAHLGAIDIGRWIHVY-INKKLKGVVTNVSSLQTSLIDMYAKCGDIDA 379

Query: 270 ARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           A++VFD  +  +S+ +W+++I G+A       A ++F ++R   ++ D      ++   +
Sbjct: 380 AQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACS 439

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVS----NSIVDMYLKCGLIDEATELFNEMPVK-NV 383
              +++ G+ I     +   G + +        ++D+    GL  EA E+ N MP++ + 
Sbjct: 440 HSGMLDLGRNIFRSMTR---GYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDG 496

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V W  ++     HG  +      +K++   +EP       +LS    +            
Sbjct: 497 VIWCSLLKACKIHGNLELGESFAKKLI--KIEPGNSGSYVLLSNIYAAAGRWNEVAKIRA 554

Query: 444 LCNDKRMKPRIEHYSCI-VDSL 464
           L NDK MK ++   S I +DS+
Sbjct: 555 LLNDKGMKKKVPGCSSIEIDSV 576


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/661 (33%), Positives = 361/661 (54%), Gaps = 26/661 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H    K+G   +  + + LID Y+ C  ++ A  VF+ ++ ++ V WTA++  + +N  
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN-- 241

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
                             N F  + +     + S    G  IHG  +K+  +  P VG +
Sbjct: 242 --------------DCPENAFRCAQSCSLLAI-SCARQG--IHGCAIKTLNDTEPHVGGA 284

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY+KCG I +A   F+++P   +I  + MI+ Y  +  +++   LF ++     +P+
Sbjct: 285 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 344

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           E++ +S L+AC ++  +  G QIH   I  G  +     +  +L+DFY KC  +  + ++
Sbjct: 345 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIG--HESDLFVGNALMDFYAKCNDMDSSLKI 402

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F  +   + +SW+++++G++Q     EA+ +F +++   +       SS++   A  A +
Sbjct: 403 FSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASI 462

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
               QIH    K     DT + NS++D Y KCG I +A ++F  +  +++++W  II+GY
Sbjct: 463 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 522

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG A +A+ LF +M   +VE + + ++A+LS C  +GLV      F  +  D  +KP 
Sbjct: 523 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPS 582

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+CIV  LGRAGRL++A   I  +P  PS  +W+ LLS+C +H ++ LGR   E +L
Sbjct: 583 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKIL 642

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            ++  +   YV++SN++A AGS ++   LRK  R+ G++KV G SWVE+  EIH F  G 
Sbjct: 643 EIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGS 702

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
             HP    I+ +L  +  +   E G++  +   LHD+ +E K   L VHSE+LA+   LV
Sbjct: 703 VDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLV 761

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
                  PG  IR+ KNLR C DCH     +SKI+K   +VRD  RFH FE G CSCGDY
Sbjct: 762 M----TPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDY 817

Query: 694 W 694
           W
Sbjct: 818 W 818



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 234/478 (48%), Gaps = 37/478 (7%)

Query: 31  GVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +HG +V+ G     DL   N L++MY K G +  A  +FD+M ERN+VS+  L+   
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            Q G+ +A  +LF ++     + N+F L+T +K +  + +      +H    K G + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG+ +ID YS C  +++A  +F+ +  K  + W AM++ Y                   
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCY-----------------SE 240

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
            + P E  F    ++C  L        IHG  I +      +  + G+L+D Y KCG + 
Sbjct: 241 NDCP-ENAFRCA-QSCSLLAISCARQGIHGCAIKT--LNDTEPHVGGALLDMYAKCGDIK 296

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR  F++I    VI  S +I  YAQ     +A ELF +L   S+  + + LSS++    
Sbjct: 297 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 356

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           +   ++ GKQIH +A K+    D  V N+++D Y KC  +D + ++F+ +   N V+W  
Sbjct: 357 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNT 416

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS------HSGLVEESQEYFS 442
           I+ G+ + GL +EA+ +F +M    +    V Y +VL AC+      H+G +  S E  S
Sbjct: 417 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK-S 475

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              ND  +       + ++D+  + G + +A  + + + ++  I  W  ++S   +HG
Sbjct: 476 TFNNDTVIG------NSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHG 526



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S++     L+  L+ C+  + LD+G Q+H   +K+G   DL + N L+D YAKC +M+ +
Sbjct: 340 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 399

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + + N VSW  ++ GF Q+G  +  LS+FC+M ++ +   + T S+ ++A    
Sbjct: 400 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 459

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S+ +  QIH    KS F  + V+GNS+ID Y+KCG I +A ++F  +  + +I+WNA+I
Sbjct: 460 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAII 519

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGF 245
           +GY L G +   L LF +M +     ++ TF + L  C S G V  G  +   + I  G 
Sbjct: 520 SGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGI 579

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLA 299
             S++      +V    + G L +A + + D+    S + W +L+      +N+A
Sbjct: 580 KPSMEHYTC--IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 632



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 98/190 (51%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F     L+ C + G   GG  +HG ++  G    +    A  L++ Y K G L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++++S+ +L+  +AQ  +   A  LFR+LR    +V+ FVL++M+ +      
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
                 +H+ A K+    +  V + ++D Y  C L+ +A  +FN +  K+ V WT +++ 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 393 YGKHGLAKEA 402
           Y ++   + A
Sbjct: 238 YSENDCPENA 247


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/646 (34%), Positives = 355/646 (54%), Gaps = 47/646 (7%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+  YAK G +     VFD+M  R+ VS+  L+  F  NG++   L +  +M     +
Sbjct: 93  NTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQ 152

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P +++    ++A   L  + +G QIHG  + +    N  V N++ DMY+KCG I++A  +
Sbjct: 153 PTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLL 212

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD M  K++++WN MI+GYV  G  ++ + LF +MQ  G  PD  T ++ L A       
Sbjct: 213 FDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------- 265

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
                                         Y +CG + +AR +F  + +K  I W+++I+
Sbjct: 266 ------------------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIV 295

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYAQ     +A  LF  +  R+++ D + +SSM+   A  A +  G+ +H     V  G+
Sbjct: 296 GYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKV--VVMGI 353

Query: 351 DTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
           D S  VS+++VDMY KCG+  +A  +F  MP++NV+TW  +I GY ++G   EA+ L+ +
Sbjct: 354 DNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYER 413

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M  ++ +PD + ++ VLSAC ++ +V+E Q+YF  + ++  + P ++HY+C++  LGR+G
Sbjct: 414 MQQENFKPDNITFVGVLSACINADMVKEGQKYFDSI-SEHGIAPTLDHYACMITLLGRSG 472

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            +D+A +LI+ MP +P+  IW TLLS C   GDL+        L  LD  N   Y+M+SN
Sbjct: 473 SVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSN 531

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           ++A  G W +   +R L + K  KK A  SWVEV  ++H F   D  HP   KI+  L  
Sbjct: 532 LYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNR 591

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +   + +++G+       LH++ EE K  S+  HSEKLA+  AL+R      P   IR+ 
Sbjct: 592 LISIL-QQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAP---IRII 647

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KN+RVC DCH F+K  S  +    ++RD+ RFH F GG CSC D W
Sbjct: 648 KNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 201/378 (53%), Gaps = 42/378 (11%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           ++L+ CS+ L L +G Q+HG +V      +  + N + DMYAKCG+++ A  +FD M+++
Sbjct: 160 NALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDK 219

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVSW  ++ G+++ GN   C+ LF +M  S +KP+  T+S                   
Sbjct: 220 NVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVS------------------- 260

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
                           ++++ Y +CGR+++A  +F  +P K  I W  MI GY   G  +
Sbjct: 261 ----------------NVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREE 304

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
              +LF  M      PD +T +S + +C  L S+  G  +HG ++  G   S+  +++ +
Sbjct: 305 DAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM--LVSSA 362

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           LVD Y KCG  ++AR +F+ +  ++VI+W+++ILGYAQ   + EA+ L+ ++++ + + D
Sbjct: 363 LVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPD 422

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
                 ++    +  +V++G++   + +    G+  ++ +   ++ +  + G +D+A +L
Sbjct: 423 NITFVGVLSACINADMVKEGQKY--FDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDL 480

Query: 375 FNEMPVK-NVVTWTVIIT 391
              MP + N   W+ +++
Sbjct: 481 IQGMPHEPNYRIWSTLLS 498


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 381/717 (53%), Gaps = 53/717 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C + L L+ G QLH  ++KMGF     ++N L+ +Y KCG ++    +FD+M  R++
Sbjct: 196 LTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDI 255

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  ++   ++    +    LF  M      + + FTLST + A+  L+S+  G +IH 
Sbjct: 256 ASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHA 314

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINE------------------------------- 166
             +K GFE N  V N++I  Y+KCG I                                 
Sbjct: 315 HVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDL 374

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD MPA++ I++NA+++G+   G   K L  F +M E G    +FT T  L ACG 
Sbjct: 375 ALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGL 434

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV--IS 284
           L       QIHGF++  GF       I  +L+D   +CG + +A+++F          I 
Sbjct: 435 LMEAKISKQIHGFILKFGF--GSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSII 492

Query: 285 WSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           W+S+I GYA+     EA+ LF Q + E ++ VD    ++++GV    A  E GKQIH +A
Sbjct: 493 WTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHA 552

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D  V NSI+ MY KC  +D+A ++FN MP  ++V+W  +I G+  H    EA+
Sbjct: 553 LKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEAL 612

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            ++ KM    ++PD V ++ ++SA  H  S LV+  +  F  +     + P +EHY+ +V
Sbjct: 613 SVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLV 672

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
             LG  G L+EA+ +I  MP++P  ++W+ LL ACR+H +  +G+   + LL +   +P 
Sbjct: 673 GVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPS 732

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            Y+++SN+++  G W+  + +R+  R KG +K  GRSW+  + ++H FY  D +HP  + 
Sbjct: 733 TYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKD 792

Query: 582 IHQ----VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
           IH     ++ME  K      G+V    + LH+++E  K++ L  HS K+A    L    L
Sbjct: 793 IHSGLELLIMECLKA-----GYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGL----L 843

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             +PG+ IR+ KN+ +CGDCH F+K +S +      +RDA+  H F  G CSC DYW
Sbjct: 844 MTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 249/550 (45%), Gaps = 51/550 (9%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H ++ K+  + D+ L N LI  Y K G +  A  VF  +   NVVS+TA++ GF ++  
Sbjct: 112 VHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 169

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  + +F +M SS ++ NEF+    +     L  +E G Q+H + +K GF     V N+
Sbjct: 170 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA 229

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE-HGEIP 212
           ++ +Y KCG ++   ++FD MP + + +WN +I+  V     ++   LFR M+   G   
Sbjct: 230 LMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRI 289

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT ++ L A   L S+  G +IH  +I  GF  ++  +   +L+ FY KCG +     
Sbjct: 290 DHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVI--NALIRFYTKCGSIKHVVA 346

Query: 273 VFDLIEQKSVISWSSLIL-------------------------------GYAQEENLAEA 301
           +F+ +  + VI+W+ +I                                G+ Q    ++A
Sbjct: 347 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKA 406

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           +  F ++ E  +++  F L+ ++         +  KQIH +  K   G +  +  +++DM
Sbjct: 407 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 466

Query: 362 YLKCGLIDEATEL--FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF-RKMLLDDVEPDG 418
             +CG + +A ++           + WT +I GY ++   +EA+ LF +  L   +  D 
Sbjct: 467 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 526

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           VA  AVL  C      E  ++          +   +   + I+    +   +D+A  +  
Sbjct: 527 VASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSD-LGVGNSIITMYSKCSNMDDAIKVFN 585

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD--GDNP--VNYVMMSNI--HAD 532
            MP    I  W  L++   +H     G E   +  +++  G  P  V +V++ +   H +
Sbjct: 586 VMPAH-DIVSWNGLIAGHLLHRQ---GDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTN 641

Query: 533 AGSWNECERL 542
           +   + C RL
Sbjct: 642 SNLVDNCRRL 651


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/651 (33%), Positives = 364/651 (55%), Gaps = 13/651 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           +  L N L+  Y +C  ++ A A F ++ E+N  S+  +M  + +N   K  L LF +  
Sbjct: 16  ETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSI 75

Query: 106 SSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           +  ++ N+ T  T +K+   L    +E+G +IH   +  GF  + VV NS+I MY+KCG 
Sbjct: 76  NEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGS 135

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
              AA +F+ M  K+LI++ +MI  Y       +   L++KM   G +PD + + + L  
Sbjct: 136 FKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV 195

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C ++     G  IH   +  G       V + +LV  Y + G +  A+ VFD I  K + 
Sbjct: 196 CPTIRE---GEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLA 249

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           S++++I  +A+ ++ ++A+ L+ ++  R+L+ + +  +S++   +    + +GK+IH   
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV 309

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
                  D + + ++V+MY KCG   EA  +FN+  +KNV TWT +++ Y + G ++  +
Sbjct: 310 KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRL 369

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             +++M  + V PD V + A+ +ACSHSGL +E   YF  +  D  + P   HY+C++D 
Sbjct: 370 EAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDL 429

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGR GRL EA+ L+ +MP  P +  W  LLSAC+V+GDL++G    + +  L+  +   Y
Sbjct: 430 LGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPY 489

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           ++M N++A AG W +   ++K+ + +GL K  G+S +E  + IH F  GD  HPL ++I 
Sbjct: 490 LLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIR 549

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
             L E+ +++    G+    K  L D+ EE K E L  HSE++A+GL L    L    G 
Sbjct: 550 ARLQEVHEQLSHA-GYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGL----LTSDAGA 604

Query: 644 VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + + KNLR+C DCH F K +SK+L    +VRD+ RFH F+ G CSCGDYW
Sbjct: 605 TLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 25/405 (6%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G ++H   +  GF  DL++ N LI MYAKCG    A  VF+KM  +N++S+T+++  
Sbjct: 101 LEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQA 160

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +           L+ +M S  + P+ +  +    A  V  ++  G  IH + + +     
Sbjct: 161 YTHTAKHVEAYELYKKMLSEGIMPDIYAYAA---ALAVCPTIREGEAIH-VKLGNHERRT 216

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD--KGLLLFRKM 205
           PV  N+++ MY + GRI  A  +FD +  K L ++N MIA  V A Y D  K + L+ +M
Sbjct: 217 PVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIA--VFAKYDDGSKAISLYIEM 274

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +     P+ +TFTS L AC  LG++  G +IH  +     P  V    A  LV+ Y KCG
Sbjct: 275 EGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTA--LVNMYAKCG 332

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
              EAR VF+    K+V +W+SL+  Y+Q       +E ++++    +  D    +++  
Sbjct: 333 STHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFN 392

Query: 326 VFADFALVEQG-------KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +   L ++G       ++ H      P          ++D+  + G + EA EL   M
Sbjct: 393 ACSHSGLPDEGLLYFRAMREDHWIVPLQPH------YTCMIDLLGRVGRLREAEELVRTM 446

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           P   +VVTWT++++    +G  K     +++ + +   PD   YL
Sbjct: 447 PYSPDVVTWTILLSACKVYGDLKIGARAYKR-ITELNPPDSGPYL 490


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/678 (33%), Positives = 373/678 (55%), Gaps = 46/678 (6%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LI      G++  A  +FDK+ E ++ +WT L+ G  Q+G  K  + ++  + S +V+P+
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           +F L +  KA      +    +IH   ++ GF  + V+GN++IDM+ KC  +N A  +FD
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            M  K +++W +M   YV  G   +G+LLFR+M  +G   +  T +S L AC     +  
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKL 194

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G ++HGF++ +    +V   ++ +LV+ Y     L +AR VFD +  + ++SW+ ++  Y
Sbjct: 195 GREVHGFILRNEMEGNV--YVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 293 AQEENLAEAMELFRQLRERSLQVDG----------------------------------- 317
              +     + LF Q+R+  ++++                                    
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNR 312

Query: 318 -FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
             ++S++ G   +   +  GK+IH Y  +     D +++ ++V +Y KCG ++ +  +FN
Sbjct: 313 ITIVSALPGC-TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFN 371

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            MP K+VV W  +I     HG   E++ LF KML   VEP+ V ++ VLS CSHS L +E
Sbjct: 372 TMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADE 431

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
               F+ + ++  + P  +HYSC+VD L RAGRL+EA + I  MP++P+ A W  LL AC
Sbjct: 432 GLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGAC 491

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           RV+ ++ELG      L  ++ DN  NYV++SNI   A  W E   +RK+ R KGL K  G
Sbjct: 492 RVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPG 551

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
           RSWV+V  +++ F  GD ++   + I++ L E++++M+ + G+     + L ++ +E +E
Sbjct: 552 RSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLD-GYQPNTDFVLQNVDQEQRE 610

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           E+L  HSE+LA+      G LN      +RVFKNLR+CGDCH  IK ++KI+ +  +VRD
Sbjct: 611 ETLCSHSERLAVAF----GILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRD 666

Query: 677 ATRFHRFEGGVCSCGDYW 694
           + RFH F  G C+C D+W
Sbjct: 667 SLRFHHFRDGYCTCNDFW 684



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 201/398 (50%), Gaps = 40/398 (10%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           + C+ +  L    ++H   ++ GF+ DL+L N LIDM+ KC  +NGA  VFD M+ ++VV
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           SWT++   ++  G  +  + LF +MG + ++ N  T+S+ + A      ++ G ++HG  
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHGFI 202

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +++  E N  V +++++MY+    + +A  +FD M  + +++WN M+  Y L    ++GL
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262

Query: 200 LLFR-----------------------------------KMQEHGEIPDEFTFTSTLKAC 224
            LF                                    KMQ+ G  P+  T  S L  C
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            +L S+ GG +IHG++    F   V   I  +LV  Y KCG L  +R VF+ + +K V++
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDV--TITTALVLLYAKCGDLELSRHVFNTMPRKDVVA 380

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYA 343
           W+++I+  +      E++ LF ++ +  ++ +      ++   +   L ++G  + ++ +
Sbjct: 381 WNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMS 440

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           ++     D    + +VD+  + G ++EA +   +MP++
Sbjct: 441 SEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIE 478



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 135/266 (50%), Gaps = 6/266 (2%)

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           + S  P +++   +  L+   +  G L  A  +FD I +  + +W+ LI G+ Q     +
Sbjct: 1   MVSKLPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKK 60

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A++++  L  R+++ D FVL S+    A    +   K+IH  A +     D  + N+++D
Sbjct: 61  AIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALID 120

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           M+ KC  ++ A  +F++M VK+VV+WT +   Y   G+ ++ + LFR+M L+ +  + + 
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT 180

Query: 421 YLAVLSACS-HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
             ++L AC+ +  L  E   +  R      M+  +   S +V+    +  L +A+ + +S
Sbjct: 181 VSSILPACADYIKLGREVHGFILR----NEMEGNVYVSSALVNMYASSLGLKQARLVFDS 236

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELG 505
           M  +  I  W  +L+A  ++ + E G
Sbjct: 237 MYHR-DIVSWNVMLTAYFLNKEYERG 261



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
            R  +  +L  C+    L  G ++HG + +  F  D+ +   L+ +YAKCG++  +  VF
Sbjct: 311 NRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVF 370

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           + M  ++VV+W  ++     +G     L LF +M  S V+PN  T    +         +
Sbjct: 371 NTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLAD 430

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
            G+ +    M S     P   +   ++D+ S+ GR+ EA      MP
Sbjct: 431 EGLLVFN-SMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMP 476


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/648 (35%), Positives = 375/648 (57%), Gaps = 30/648 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+  Y   G +N A  VFD+M ERNVVSWTA++ G+++ G      +LF QM      
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM------ 217

Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P +  +S  +   G+L    ++   ++  M      E + V   ++I  Y + GR+ EA 
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEAR 273

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD MP +++++W  MI GYV     D    LF  M E  E+    ++T+ LK   + G
Sbjct: 274 MLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEV----SWTAMLKGYTNCG 329

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            +   +++   +        +K+V+A  +++  + + G + +AR+VFD + +K   +WS+
Sbjct: 330 RLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I  Y ++    +A+ELFR ++   ++ +   L S++ V A  A ++ G++IHA   +  
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
             LD  V++ ++ MY+KCG + +A ++F+   VK+VV W  IITGY +HGL  EA+ +F 
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
            M    + PD V ++ VLSACS++G V++  E F+ +    +++ +IEHY+C+VD LGRA
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G+L+EA +LIE MP++    IW  LL ACR H  L+L     + LL L+  N   ++++S
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLS 622

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT-HPLTEKIHQVL 586
           NI+A  G W++   LR+  R + + K  G SW+ V+K++H F GGD + HP   +I+++L
Sbjct: 623 NIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRIL 682

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
             +   ++E  G+     + LHD+ EE K +SL  HSEKLA+   L++  +    G  IR
Sbjct: 683 EWLSGLLREA-GYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPI----GMPIR 737

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V KNLRVCGDCH  IK ++K+     ++RDA RFH F+ G CSC DYW
Sbjct: 738 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 215/452 (47%), Gaps = 63/452 (13%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI  Y++ G++  A  VFD+M ++N++SW +++ G+ QN   +   ++F +M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----- 156

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
                                             E N +  N ++  Y   G INEA  +
Sbjct: 157 ----------------------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD MP +++++W AM+ GYV  G   +   LF +M E   +    ++T  L      G +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLLQEGRI 238

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
               ++   +           V   +++  Y + G LVEAR +FD + +++V+SW+++I 
Sbjct: 239 DEACRLFDMMPEK------DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GY Q + +  A +LF  + E+    +    ++M+  + +   +++  ++   A  + S  
Sbjct: 293 GYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFN-AMPIKS-- 345

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
                N+++  + + G + +A ++F++M  K+  TW+ +I  Y + GL  +A+ LFR M 
Sbjct: 346 -VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQ 404

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAG 468
            + + P+  + ++VLS C+    ++  +E  ++L    R +  ++ Y  S ++    + G
Sbjct: 405 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV---RSQFDLDVYVASVLLSMYIKCG 461

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            L +AK + +   VK  + +W ++++    HG
Sbjct: 462 NLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 183/384 (47%), Gaps = 16/384 (4%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++   ++I  Y + G +  A  +FD+M  RNVVSWT ++ G++QN        LF  M 
Sbjct: 252 DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP 311

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               + NE + +  +K       ++   ++ + M +KS      V  N++I  + + G +
Sbjct: 312 ----EKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEV 362

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            +A ++FD M  K   TW+AMI  Y   G     L LFR MQ  G  P+  +  S L  C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
             L ++  G +IH  L+ S F   V   +A  L+  Y+KCG L +A++VFD    K V+ 
Sbjct: 423 AGLANLDHGREIHAQLVRSQFDLDV--YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYA 343
           W+S+I GYAQ     EA+ +F  +    +  D      ++   +    V++G +I ++  
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
            K            +VD+  + G ++EA +L  +MP++ + + W  ++     H     A
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
               +K+L+  +EP       +LS
Sbjct: 601 EVAAKKLLV--LEPKNAGPFILLS 622



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 88/409 (21%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           NS+I  YS+ G+I +A  +FD M  K++I+WN+++AGY       +   +F KM E    
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN-- 159

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
                                                  T+    LV  Y+  G + EAR
Sbjct: 160 ---------------------------------------TISWNGLVSGYINNGMINEAR 180

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VFD + +++V+SW++++ GY +E  ++EA  LF Q+ E+++       + M+G      
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV----VSWTVMLG-----G 231

Query: 332 LVEQGKQIHA--YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
           L+++G+   A      +P   D     +++  Y + G + EA  LF+EMP +NVV+WT +
Sbjct: 232 LLQEGRIDEACRLFDMMPEK-DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTM 290

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
           ITGY    +  + V + RK+     E + V++ A+L   ++ G ++E+ E F+ +     
Sbjct: 291 ITGY----VQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346

Query: 445 --CND------------------KRMKPRIE-HYSCIVDSLGRAGRLDEAKNLIESMP-- 481
             CN                    +M+ + E  +S ++    R G   +A  L   M   
Sbjct: 347 VACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQRE 406

Query: 482 -VKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDNPVNYVMMS 527
            ++P+     ++LS C    +L+ GRE+   L+R   D D  V  V++S
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLS 455



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 142/303 (46%), Gaps = 52/303 (17%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           L+ + F  S   +   SL+  Y + G + +AR VFD +  K++ISW+S++ GY Q +   
Sbjct: 87  LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA  +F ++ ER                                       +T   N +V
Sbjct: 147 EAQNMFDKMSER---------------------------------------NTISWNGLV 167

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y+  G+I+EA E+F+ MP +NVV+WT ++ GY K G+  EA  LF +M     E + V
Sbjct: 168 SGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM----PEKNVV 223

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           ++  +L      G ++E+   F  +  +K +  R    + ++    + GRL EA+ L + 
Sbjct: 224 SWTVMLGGLLQEGRIDEACRLFD-MMPEKDVVTR----TNMIGGYCQVGRLVEARMLFDE 278

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP + ++  W T+++    +  +++ R++ E++      N V++  M   + + G  +E 
Sbjct: 279 MP-RRNVVSWTTMITGYVQNQQVDIARKLFEVMPE---KNEVSWTAMLKGYTNCGRLDEA 334

Query: 540 ERL 542
             L
Sbjct: 335 SEL 337



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD+G ++H  LV+  F  D+ + + L+ MY KCG +  A  VFD+  
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV W +++ G+ Q+G     L +F  M  S + P++ T    + A     +V+ G++
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           I + M  K   E        ++D+  + G++NEA  + + MP ++  I W A++  
Sbjct: 535 IFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/562 (36%), Positives = 322/562 (57%), Gaps = 2/562 (0%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
           H   +KM    D+ + + L++MY K G    A  VFD M ERN VSW  ++ G+     A
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLA 190

Query: 95  KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSI 154
              L LF  M       NEF  ++ + A  +   V NG QIH + +K+G      VGN++
Sbjct: 191 AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNAL 250

Query: 155 IDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
           + MY+KCG +++A + F+    K+ ITW+AMI GY  +G SDK L LF  M   G  P E
Sbjct: 251 VTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSE 310

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
           FTF   + AC  LG+   G Q+H +L+  GF   +  + A  LVD Y KC  +V+AR+ F
Sbjct: 311 FTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTA--LVDMYAKCSSIVDARKGF 368

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D +++  ++ W+S+I GY Q     +A+ L+ ++    +  +   ++S++   +  A +E
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALE 428

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           QGKQIHA   K   GL+  + +++  MY KCG + + T +F  MP ++V++W  +I+G  
Sbjct: 429 QGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLS 488

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           ++G  KEA+ LF +M L+  +PD V ++ +LSACSH GLVE    YF  + ++  M PR+
Sbjct: 489 QNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRV 548

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY+C+VD L RAG+L EA    ES  +   + +W+ +L ACR + + ELG   GE L+ 
Sbjct: 549 EHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLME 608

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           L       YV++S+I++  G W + ER+R++ + +G+ K  G SW+E+   +H F   D 
Sbjct: 609 LGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQ 668

Query: 575 THPLTEKIHQVLMEMEKRMKEE 596
            HP    IH  L ++ K+MK+E
Sbjct: 669 MHPQIGDIHVELRQLSKQMKDE 690



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 259/511 (50%), Gaps = 13/511 (2%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           + N  L  G  LH  ++K   S  + + N L+++YAKC  +  A  VF+++  ++VVSW 
Sbjct: 17  THNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75

Query: 83  ALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            ++ G+ Q+G + +   + LF +M + +  PN  T +    A+  L     G   H + +
Sbjct: 76  CIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAI 135

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K     +  VG+S+++MY K G   EA ++FD MP ++ ++W  MI+GY     + + L 
Sbjct: 136 KMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALG 195

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LFR M+   E  +EF FTS L A      V  G QIH   + +G    V   +  +LV  
Sbjct: 196 LFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVS--VGNALVTM 253

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG L +A + F+    K+ I+WS++I GYAQ  +  +A++LF  +    ++   F  
Sbjct: 254 YAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTF 313

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
             ++   +D     +GKQ+H Y  K+       V  ++VDMY KC  I +A + F+ +  
Sbjct: 314 VGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE 373

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
            ++V WT +I GY ++G  ++A+ L+ +M ++ + P+ +   +VL ACS    +E+ ++ 
Sbjct: 374 PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQI 433

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            +R          +   S +     + G L +   +   MP +  I+ W  ++S    +G
Sbjct: 434 HARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS-WNAMISGLSQNG 491

Query: 501 DLELGREVGEIL--LRLDGDNPVNYVMMSNI 529
               G+E  E+   ++L+G  P +YV   NI
Sbjct: 492 ---CGKEALELFEEMQLEGTKP-DYVTFVNI 518



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L++ G Q+H   VK G    + + N L+ MYAKCG ++ A   F+   ++N ++W+A++ 
Sbjct: 224 LVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMIT 283

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+ Q+G++   L LF  M  S ++P+EFT    I A   L +   G Q+H   +K GFE 
Sbjct: 284 GYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFES 343

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              V  +++DMY+KC  I +A + FD +    ++ W +MI GYV  G ++  L L+ +M+
Sbjct: 344 QIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRME 403

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G +P+E T  S LKAC SL ++  G QIH   +  GF   V   I  +L   Y KCGC
Sbjct: 404 MEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVP--IGSALSTMYAKCGC 461

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L +   VF  +  + VISW+++I G +Q     EA+ELF +++    + D     +++  
Sbjct: 462 LKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKN-V 383
            +   LVE+G            G+D  V +   +VD+  + G + EA E      + + +
Sbjct: 522 CSHMGLVERGWGYFRMMFD-EFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGM 580

Query: 384 VTWTVII 390
             W +I+
Sbjct: 581 CLWRIIL 587



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 3/155 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L+ CS    L+ G Q+H   VK GF  ++ + + L  MYAKCG +     VF +M 
Sbjct: 414 MASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP 473

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V+SW A++ G  QNG  K  L LF +M     KP+  T    + A   +  VE G  
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEA 167
              M M   F  +P V +   ++D+ S+ G++ EA
Sbjct: 534 YFRM-MFDEFGMDPRVEHYACMVDILSRAGKLKEA 567


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/648 (35%), Positives = 375/648 (57%), Gaps = 30/648 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+  Y   G +N A  VFD+M ERNVVSWTA++ G+++ G      +LF QM      
Sbjct: 164 NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM------ 217

Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P +  +S  +   G+L    ++   ++  M      E + V   ++I  Y + GR+ EA 
Sbjct: 218 PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEAR 273

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD MP +++++W  MI GYV     D    LF  M E  E+    ++T+ LK   + G
Sbjct: 274 MLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEV----SWTAMLKGYTNCG 329

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            +   +++   +        +K+V+A  +++  + + G + +AR+VFD + +K   +WS+
Sbjct: 330 RLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I  Y ++    +A+ELFR ++   ++ +   L S++ V A  A ++ G++IHA   +  
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQ 442

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
             LD  V++ ++ MY+KCG + +A ++F+   VK+VV W  IITGY +HGL  EA+ +F 
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
            M    + PD V ++ VLSACS++G V++  E F+ +    +++ +IEHY+C+VD LGRA
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           G+L+EA +LIE MP++    IW  LL ACR H  L+L     + LL L+  N   ++++S
Sbjct: 563 GKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLS 622

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT-HPLTEKIHQVL 586
           NI+A  G W++   LR+  R + + K  G SW+ V+K++H F GGD + HP   +I+++L
Sbjct: 623 NIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRIL 682

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
             +   ++E  G+     + LHD+ EE K +SL  HSEKLA+   L++  +    G  IR
Sbjct: 683 EWLSGLLREA-GYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPI----GMPIR 737

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V KNLRVCGDCH  IK ++K+     ++RDA RFH F+ G CSC DYW
Sbjct: 738 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 215/452 (47%), Gaps = 63/452 (13%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI  Y++ G++  A  VFD+M ++N++SW +++ G+ QN   +   ++F +M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----- 156

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
                                             E N +  N ++  Y   G INEA  +
Sbjct: 157 ----------------------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD MP +++++W AM+ GYV  G   +   LF +M E   +    ++T  L      G +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV----SWTVMLGGLLQEGRI 238

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
               ++   +           V   +++  Y + G LVEAR +FD + +++V+SW+++I 
Sbjct: 239 DEACRLFDMMPEK------DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GY Q + +  A +LF  + E+    +    ++M+  + +   +++  ++   A  + S  
Sbjct: 293 GYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFN-AMPIKS-- 345

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
                N+++  + + G + +A ++F++M  K+  TW+ +I  Y + GL  +A+ LFR M 
Sbjct: 346 -VVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQ 404

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAG 468
            + + P+  + ++VLS C+    ++  +E  ++L    R +  ++ Y  S ++    + G
Sbjct: 405 REGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV---RSQFDLDVYVASVLLSMYIKCG 461

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            L +AK + +   VK  + +W ++++    HG
Sbjct: 462 NLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 183/384 (47%), Gaps = 16/384 (4%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++   ++I  Y + G +  A  +FD+M  RNVVSWT ++ G++QN        LF  M 
Sbjct: 252 DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP 311

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               + NE + +  +K       ++   ++ + M +KS      V  N++I  + + G +
Sbjct: 312 ----EKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEV 362

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            +A ++FD M  K   TW+AMI  Y   G     L LFR MQ  G  P+  +  S L  C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
             L ++  G +IH  L+ S F   V   +A  L+  Y+KCG L +A++VFD    K V+ 
Sbjct: 423 AGLANLDHGREIHAQLVRSQFDLDV--YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVM 480

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYA 343
           W+S+I GYAQ     EA+ +F  +    +  D      ++   +    V++G +I ++  
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
            K            +VD+  + G ++EA +L  +MP++ + + W  ++     H     A
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
               +K+L+  +EP       +LS
Sbjct: 601 EVAAKKLLV--LEPKNAGPFILLS 622



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 88/409 (21%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           NS+I  YS+ G+I +A  +FD M  K++I+WN+++AGY       +   +F KM E    
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERN-- 159

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
                                                  T+    LV  Y+  G + EAR
Sbjct: 160 ---------------------------------------TISWNGLVSGYINNGMINEAR 180

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VFD + +++V+SW++++ GY +E  ++EA  LF Q+ E+++       + M+G      
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV----VSWTVMLG-----G 231

Query: 332 LVEQGKQIHA--YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
           L+++G+   A      +P   D     +++  Y + G + EA  LF+EMP +NVV+WT +
Sbjct: 232 LLQEGRIDEACRLFDMMPEK-DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTM 290

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
           ITGY    +  + V + RK+     E + V++ A+L   ++ G ++E+ E F+ +     
Sbjct: 291 ITGY----VQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346

Query: 445 --CND------------------KRMKPRIE-HYSCIVDSLGRAGRLDEAKNLIESMP-- 481
             CN                    +M+ + E  +S ++    R G   +A  L   M   
Sbjct: 347 VACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQRE 406

Query: 482 -VKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDNPVNYVMMS 527
            ++P+     ++LS C    +L+ GRE+   L+R   D D  V  V++S
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLS 455



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 142/303 (46%), Gaps = 52/303 (17%)

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           L+ + F  S   +   SL+  Y + G + +AR VFD +  K++ISW+S++ GY Q +   
Sbjct: 87  LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA  +F ++ ER                                       +T   N +V
Sbjct: 147 EAQNMFDKMSER---------------------------------------NTISWNGLV 167

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y+  G+I+EA E+F+ MP +NVV+WT ++ GY K G+  EA  LF +M     E + V
Sbjct: 168 SGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM----PEKNVV 223

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
           ++  +L      G ++E+   F  +  +K +  R    + ++    + GRL EA+ L + 
Sbjct: 224 SWTVMLGGLLQEGRIDEACRLFD-MMPEKDVVTR----TNMIGGYCQVGRLVEARMLFDE 278

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP + ++  W T+++    +  +++ R++ E++      N V++  M   + + G  +E 
Sbjct: 279 MP-RRNVVSWTTMITGYVQNQQVDIARKLFEVMPE---KNEVSWTAMLKGYTNCGRLDEA 334

Query: 540 ERL 542
             L
Sbjct: 335 SEL 337



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD+G ++H  LV+  F  D+ + + L+ MY KCG +  A  VFD+  
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV W +++ G+ Q+G     L +F  M  S + P++ T    + A     +V+ G++
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           I + M  K   E        ++D+  + G++NEA  + + MP ++  I W A++  
Sbjct: 535 IFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/614 (34%), Positives = 344/614 (56%), Gaps = 38/614 (6%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           + F+  + +KA   +S+  +G++IHG+  K GF  +P +   +I MY+ C RI +A  +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D M     + WN +I GY   G+ D  L LF  M+     PD     + L ACG  G++ 
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL------------------------ 267
            G  IH F+  +G  Y++ + +  +L++ Y  CG +                        
Sbjct: 240 YGRTIHEFVKDNG--YAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297

Query: 268 -------VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
                   +AR +FD + ++ ++ WS++I GYA+ +   EA++LF ++ ++    D   +
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++   +    + Q   IH Y  +   G   SV+N+++DMY KCG + +A E+F  MP 
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR 417

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           KNV++W+ +I  +  HG A  A+ LFR+M   ++EP+GV ++ VL AC H+GLVEE ++ 
Sbjct: 418 KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           FS + N+  + P  EHY C+VD   RA  L +A  LIE+MP  P++ IW +L+SAC+VHG
Sbjct: 478 FSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG 537

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           + ELG    + LL L+ D+    V++SNI+A    WN+   +RK    KG+ K    S +
Sbjct: 538 EAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRI 597

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           E++ ++H F   D  H  +++I++ L E+  ++K  +G+       L D++EE K+E + 
Sbjct: 598 EINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK-LVGYKPSTSGILIDLEEEDKKELVL 656

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSEKLA+   L+    + +    IR+ KNLR+C DCH F+K +SK+ ++  VVRD TRF
Sbjct: 657 WHSEKLAVCYGLI----SRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRF 712

Query: 681 HRFEGGVCSCGDYW 694
           H   GG+CSC DYW
Sbjct: 713 HHCSGGICSCRDYW 726



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 258/528 (48%), Gaps = 58/528 (10%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R      L+  SK    ++G+++HG   K+GF  D  +   LI MYA C  +  A  +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           DKM   + V+W  ++ G+ QNG+    L LF  M SS +KP+   L T + A G   ++ 
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT--------- 181
            G  IH     +G+  +  +  ++I+MY+ CG ++ A +++D + +K LI          
Sbjct: 240 YGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYA 299

Query: 182 ----------------------WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
                                 W+AMI+GY  +    + L LF +M +   +PD+ T  S
Sbjct: 300 KLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLS 359

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            + AC  +G++     IH ++  SGF  ++   +  +L+D Y KCG LV+AR VF+ + +
Sbjct: 360 VISACSHVGALAQANWIHTYVDRSGFGRALS--VNNALIDMYAKCGNLVKAREVFENMPR 417

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
           K+VISWSS+I  +A   N   A++LFR+++E +++ +G     ++       LVE+G+++
Sbjct: 418 KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477

Query: 340 HAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKH 396
            +       G+  +  +   +VD+Y +   + +A EL   MP   NV+ W  +++    H
Sbjct: 478 FSSMIN-EHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVH 536

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-------SHSGLVEESQEYFSRLCNDKR 449
           G A+  +G F    L ++EPD    L VLS         +  GL+ +S  Y  +  + ++
Sbjct: 537 GEAE--LGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSY--KGISKEK 592

Query: 450 MKPRIE-----HYSCIVDSLGRAG-----RLDEAKNLIESMPVKPSIA 487
              RIE     H   + D   +       +LDE  + ++ +  KPS +
Sbjct: 593 ASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTS 640



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 2/201 (0%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           V ++  +   +  CS    L     +H  + + GF   L +NN LIDMYAKCG +  A  
Sbjct: 351 VPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKARE 410

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VF+ M  +NV+SW++++  F  +GNA + + LF +M   +++PN  T    + A G    
Sbjct: 411 VFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGL 470

Query: 129 VENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMI 186
           VE G ++   M  + G          ++D+Y +   + +A  + + MP A ++I W +++
Sbjct: 471 VEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLM 530

Query: 187 AGYVLAGYSDKGLLLFRKMQE 207
           +   + G ++ G    +++ E
Sbjct: 531 SACQVHGEAELGEFAAKRLLE 551



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 1/130 (0%)

Query: 304 LFRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
           L+  LR   +  +D F   S++   +  +    G +IH  A+K+    D  +   ++ MY
Sbjct: 107 LYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMY 166

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
             C  I +A  LF++M   + V W +II GY ++G   +A+ LF  M   D++PD V   
Sbjct: 167 ASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILC 226

Query: 423 AVLSACSHSG 432
            VLSAC H+G
Sbjct: 227 TVLSACGHAG 236


>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/588 (38%), Positives = 344/588 (58%), Gaps = 12/588 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           + +L+  +K   L  G QLH  ++K+G    L L N ++ +Y KC E N  C +FD+M  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 76  RNVVSWTALMCGFLQNGNAKACL-----SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           +NVVSW  L+CG ++ GN K  L       F QM    + PN  TL+  ++AS  L+ V 
Sbjct: 137 KNVVSWNTLICGVVE-GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVG 195

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
              Q+H   +KSGF+ N  VG++++D Y+K G ++EA   FD + ++ L+ WN M++ Y 
Sbjct: 196 ICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYA 255

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
           L G   K   +F+ M+  G   D FTFTS + +CG LGS G G Q+HG +I   F   V 
Sbjct: 256 LNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDV- 314

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            ++A +LVD Y K   + +AR+ FD +  K+++SW+++I+GY Q  +  EAM L +++  
Sbjct: 315 -LVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIR 373

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLI 368
                D   L+S++    + +   +  Q+HAY   V +G +   S++N++V  Y KCG I
Sbjct: 374 VYTYPDELALASILSSCGNLSATSEVVQVHAYV--VENGFEAFLSIANALVSAYSKCGSI 431

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A + F+ +   ++++WT ++  Y  HGL+KE V +F KML  +V PD VA+L VLSAC
Sbjct: 432 GSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSAC 491

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +H G V E   YF+ + N  ++ P  EHY+CI+D LGRAG LDEA NL+ SMPV+P    
Sbjct: 492 AHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDT 551

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
               L AC+VH ++ L R   E L  ++ + P NY +MSN++A  G W +  R+RKL R 
Sbjct: 552 LGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRE 611

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           +   KV G SW+E+  E+H F   D THP   +++ +L  + + M+E+
Sbjct: 612 RCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMEED 659



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 21/174 (12%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C         VQ+H  +V+ GF   L + N L+  Y+KCG +  A   F  + 
Sbjct: 383 LASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA 442

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E +++SWT+LM  +  +G +K  + +F +M  S+V+P++      +   GVLS+  +G  
Sbjct: 443 EPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDK------VAFLGVLSACAHG-- 494

Query: 135 IHGMCMKSGFEWNPVVG-----------NSIIDMYSKCGRINEAARMFDVMPAK 177
             G  ++    +N ++              IID+  + G ++EA  +   MP +
Sbjct: 495 --GFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVE 546


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/580 (35%), Positives = 337/580 (58%), Gaps = 2/580 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+ C   L   YG  LHG  VK G    + + + L+DMY K GE+  +C VFD+M 
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP 178

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN V+WTA++ G ++ G ++A L+ F  MG S V+ + +  +  +KAS    ++ +G  
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K GF+ N  V NS+  MY+KCG+++     F  M    +++W  ++  Y+  G 
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D GL  F++M+    IP+E+TF++ +  C +   +  G Q+H  ++  GF  ++   +A
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VA 356

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S++  Y KCG L    +VF  ++ + +I+WS++I  Y+Q     EA E   ++R    +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F L+S++ V    A++EQGKQ+HA+   V     + V ++++ MY KCG I EA+++
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F +    ++++WT +I+GY +HG ++EA+ LF  +    + PD V ++ VL+ACSH+G+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +    YF+ +  D  + P  EHY C++D L RAGRL +A+ LI SMP++    +W TLL 
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR+HGD++ G+     +L+LD +    ++ ++NI A  G W E   +R L +SKG+ K 
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            G S V+V   +  F  GD +HP  E I+ +L E+   M+
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 242/480 (50%), Gaps = 17/480 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL   N+ + +  K   +  A  +FD++ +R+ VSWT ++ G++ + ++   L LF +M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 106 -SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             S ++ + F LS  +K  G+  +   G  +HG  +K G   +  VG++++DMY K G I
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             + ++FD MP ++ +TW A+I G V AGYS+ GL  F  M       D + +   LKA 
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++  G  IH   +  GF  +  + +A SL   Y KCG L      F  +    V+S
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++++  Y Q       ++ F+++R  ++  + +  S+++   A+FA ++ G+Q+HA+  
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
            V      SV+NSI+ +Y KCG +   +++F  M  ++++TW+ II  Y + G  +EA  
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
              +M  +  +P+  A  +VLS C    ++E+ ++  + +     +   +E  S +  +L
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHV-----LSVGLEQTSMVCSAL 460

Query: 465 ----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
                + G + EA  +      K  I  W  ++S    HG     +EL   + ++ LR D
Sbjct: 461 IIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPD 519



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 16/279 (5%)

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
           T+     + + F   V    A + +   VK   L +AR +FD + Q+  +SW+++I GY 
Sbjct: 32  TKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYV 91

Query: 294 QEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
              + +EA+ LF ++R +S L++D F+LS  +           G  +H ++ K       
Sbjct: 92  NSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSV 151

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            V ++++DMY+K G I  + ++F+EMP +N VTWT +ITG  + G ++  +  F  M   
Sbjct: 152 FVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRS 211

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAG 468
            VE D  AY   L A + SG +        R  + + +K   +  S + +SL     + G
Sbjct: 212 KVEYDSYAYAIALKASADSGALNH-----GRSIHTQTLKKGFDENSFVANSLTTMYNKCG 266

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           +LD   +    M     ++ W T+++A      +++G+E
Sbjct: 267 KLDYGLHTFRKMRTLDVVS-WTTIVTAY-----IQMGKE 299


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/580 (35%), Positives = 337/580 (58%), Gaps = 2/580 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L+ C   L   YG  LHG  VK G    + + + L+DMY K GE+  +C VFD+M 
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP 178

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN V+WTA++ G ++ G ++A L+ F  MG S V+ + +  +  +KAS    ++ +G  
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K GF+ N  V NS+  MY+KCG+++     F  M    +++W  ++  Y+  G 
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            D GL  F++M+    IP+E+TF++ +  C +   +  G Q+H  ++  GF  ++   +A
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VA 356

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S++  Y KCG L    +VF  ++ + +I+WS++I  Y+Q     EA E   ++R    +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            + F L+S++ V    A++EQGKQ+HA+   V     + V ++++ MY KCG I EA+++
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F +    ++++WT +I+GY +HG ++EA+ LF  +    + PD V ++ VL+ACSH+G+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +    YF+ +  D  + P  EHY C++D L RAGRL +A+ LI SMP++    +W TLL 
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACR+HGD++ G+     +L+LD +    ++ ++NI A  G W E   +R L +SKG+ K 
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            G S V+V   +  F  GD +HP  E I+ +L E+   M+
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 243/480 (50%), Gaps = 17/480 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL   N+ + +  K   +  A  +FD++ +R+ VSWT ++ G++ + ++   L LF +M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 106 -SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             S ++ + F LS  +K  G+  +   G  +HG  +K+G   +  VG++++DMY K G I
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             + ++FD MP ++ +TW A+I G V AGYS+ GL  F  M       D + +   LKA 
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++  G  IH   +  GF  +  + +A SL   Y KCG L      F  +    V+S
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++++  Y Q       ++ F+++R  ++  + +  S+++   A+FA ++ G+Q+HA+  
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
            V      SV+NSI+ +Y KCG +   +++F  M  ++++TW+ II  Y + G  +EA  
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
              +M  +  +P+  A  +VLS C    ++E+ ++  + +     +   +E  S +  +L
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHV-----LSVGLEQTSMVCSAL 460

Query: 465 ----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
                + G + EA  +      K  I  W  ++S    HG     +EL   + ++ LR D
Sbjct: 461 IIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPD 519



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 141/281 (50%), Gaps = 20/281 (7%)

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
           T+     + + F   V    A + +   VK   L +AR +FD + Q+  +SW+++I GY 
Sbjct: 32  TKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYV 91

Query: 294 QEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
              + +EA+ LF ++R +S L++D F+LS  +           G  +H ++ K  +GL  
Sbjct: 92  NSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVK--TGLVN 149

Query: 353 S--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           S  V ++++DMY+K G I  + ++F+EMP +N VTWT +ITG  + G ++  +  F  M 
Sbjct: 150 SVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMG 209

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GR 466
              VE D  AY   L A + SG +        R  + + +K   +  S + +SL     +
Sbjct: 210 RSKVEYDSYAYAIALKASADSGALNH-----GRSIHTQTLKKGFDENSFVANSLTTMYNK 264

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            G+LD   +    M     ++ W T+++A      +++G+E
Sbjct: 265 CGKLDYGLHTFRKMRTLDVVS-WTTIVTAY-----IQMGKE 299


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/596 (34%), Positives = 357/596 (59%), Gaps = 4/596 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++HG ++K+GF     + N LI  Y KCGE+  A  +FD++ +R+VVSW +++ G   NG
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            ++  L  F QM +  V  +  TL   + A   + ++  G  +H   +K+GF    +  N
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMYSKCG +N A  +F  M   ++++W ++IA +V  G   + + LF +MQ  G  P
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +  TS + AC    S+  G ++H  +  +    ++   ++ +L++ Y KCG + EA  
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLP--VSNALMNMYAKCGSMEEANL 416

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F  +  K+++SW+++I GY+Q     EA++LF  + ++ L+ D   ++ ++   A  A 
Sbjct: 417 IFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAA 475

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +E+G++IH +  +     D  V+ ++VDMY+KCGL+  A +LF+ +P K+++ WTV+I G
Sbjct: 476 LEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAG 535

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG HG  KEA+  F KM +  +EP+  ++ ++L AC+HSGL++E  + F  + ++  ++P
Sbjct: 536 YGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEP 595

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           ++EHY+C+VD L R+G L  A   IE+MP+KP  AIW  LLS CR+H D+EL  +V E +
Sbjct: 596 KLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHI 655

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
             L+ +N   YV+++N++A+A  W E +++++     GLK   G SW+EV  + + F+ G
Sbjct: 656 FELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAG 715

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           D +HP  + I  +L ++  +M    G+   +KYAL +  +  KE  L  HSEKLA+
Sbjct: 716 DTSHPQAKMIDSLLRKLTMKMNRG-GYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 284/549 (51%), Gaps = 39/549 (7%)

Query: 3   RVSFSLVSERQR-------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           R +  L+S  QR           L+ C++   L+ G ++H  +   G + D +L   L+ 
Sbjct: 41  RNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVF 100

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY  CG++     +FD +L   +  W  LM  + + GN +  + LF +M    ++ + +T
Sbjct: 101 MYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYT 160

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
            +  +K     + V    ++HG  +K GF  +N VV NS+I  Y KCG +  A  +FD +
Sbjct: 161 FTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV-NSLIAAYFKCGEVESARILFDEL 219

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
             + +++WN+MI+G  + G+S  GL  F +M   G   D  T  + L AC ++G++  G 
Sbjct: 220 SDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGR 279

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
            +H + + +GF   V  +   +L+D Y KCG L  A  VF  + + +++SW+S+I  + +
Sbjct: 280 ALHAYGVKAGFSGGV--MFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVR 337

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
           E    EA+ LF +++ + L+ D + ++S++   A    +++G+++H +  K   G +  V
Sbjct: 338 EGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPV 397

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           SN++++MY KCG ++EA  +F+++PVKN+V+W  +I GY ++ L  EA+ LF  M    +
Sbjct: 398 SNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQL 456

Query: 415 EPDGVAYLAVLSACSHSGLVEESQE---------YFSRLCNDKRMKPRIEHYSC-IVDSL 464
           +PD V    VL AC+    +E+ +E         YFS L           H +C +VD  
Sbjct: 457 KPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL-----------HVACALVDMY 505

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGDNPVN 522
            + G L  A+ L + +P K  I +W  +++   +HG    G+E       +R+ G  P  
Sbjct: 506 VKCGLLVLAQQLFDMIPKKDMI-LWTVMIAGYGMHG---FGKEAISTFEKMRVAGIEPEE 561

Query: 523 YVMMSNIHA 531
               S ++A
Sbjct: 562 SSFTSILYA 570



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 225/415 (54%), Gaps = 9/415 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L + L  C+    L  G  LH   VK GFS  +M NN L+DMY+KCG +NGA  VF KM 
Sbjct: 262 LVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMG 321

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E  +VSWT+++   ++ G     + LF +M S  ++P+ + +++ + A    +S++ G +
Sbjct: 322 ETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGRE 381

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K+    N  V N++++MY+KCG + EA  +F  +P K++++WN MI GY     
Sbjct: 382 VHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSL 441

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L LF  MQ+  + PD+ T    L AC  L ++  G +IHG ++  G+   +   +A
Sbjct: 442 PNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLH--VA 498

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LVD YVKCG LV A+++FD+I +K +I W+ +I GY       EA+  F ++R   ++
Sbjct: 499 CALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIE 558

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            +    +S++       L+++G ++   + K    ++  + +   +VD+ ++ G +  A 
Sbjct: 559 PEESSFTSILYACTHSGLLKEGWKLFD-SMKSECNIEPKLEHYACMVDLLIRSGNLSRAY 617

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +    MP+K +   W  +++G   H   + A  +   +   ++EP+   Y  +L+
Sbjct: 618 KFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIF--ELEPENTRYYVLLA 670



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I  + +  +L  AM+L  + +   L+++ +   S++ + A+   +E GK++H+  +    
Sbjct: 31  ICKFCEMGDLRNAMKLLSRSQRSELELNTYC--SVLQLCAELKSLEDGKRVHSIISSNGM 88

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
            +D  +   +V MY+ CG + +   +F+ +    +  W ++++ Y K G  +E+VGLF K
Sbjct: 89  AIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEK 148

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA- 467
           M    +  D   +  VL   + S  V E +     +     +K     Y+ +V+SL  A 
Sbjct: 149 MQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYV-----LKLGFGSYNAVVNSLIAAY 203

Query: 468 ---GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
              G ++ A+ L + +  +  ++ W +++S C ++G    G E    +L L  D
Sbjct: 204 FKCGEVESARILFDELSDRDVVS-WNSMISGCTMNGFSRNGLEFFIQMLNLGVD 256


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/561 (36%), Positives = 330/561 (58%), Gaps = 8/561 (1%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H   + +G   + V+ N ++  Y++   I++A  +FD +  +   TW+ M+ G+  AG
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                   FR++   G  PD +T    ++ C     +  G  IH  ++  G        +
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSD--HFV 138

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLVD Y KC  + +A+R+F+ +  K +++W+ +I  YA + N  E++ LF ++RE  +
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGV 197

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   + +++   A    + + +  + Y  +    LD  +  +++DMY KCG ++ A E
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ M  KNV++W+ +I  YG HG  K+A+ LF  ML   + P+ V ++++L ACSH+GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +EE   +F+ +  +  ++P ++HY+C+VD LGRAGRLDEA  LIE+M V+    +W  LL
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            ACR+H  +EL  +    LL L   NP +YV++SNI+A AG W +  + R +   + LKK
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
           + G +W+EVD + + F  GD +HP +++I+++LM + K++ E  G+V    + L D++EE
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKL-EMAGYVPDTDFVLQDVEEE 496

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            K+E L  HSEKLAI   L+   + E  G+ IR+ KNLRVCGDCH F K +S I++   +
Sbjct: 497 VKQEMLYTHSEKLAIAFGLI--AIPE--GEPIRISKNLRVCGDCHTFSKMVSSIMRRSII 552

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRDA RFH F  G CSCGDYW
Sbjct: 553 VRDANRFHHFNDGTCSCGDYW 573



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 208/399 (52%), Gaps = 13/399 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  +V  G   DL++ N L+  YA+   ++ A ++FD +  R+  +W+ ++ GF + G
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +   C + F ++    V P+ +TL   I+     + ++ G  IH + +K G   +  V  
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++DMY+KC  + +A R+F+ M +K L+TW  MI  Y     + + L+LF +M+E G +P
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVP 199

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D+    + + AC  LG++      + +++ +GF  S+  ++  +++D Y KCG +  AR 
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGF--SLDVILGTAMIDMYAKCGSVESARE 257

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +++K+VISWS++I  Y       +A++LF  +   ++  +     S++   +   L
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 333 VEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVII 390
           +E+G +  ++   +     D      +VD+  + G +DEA  L   M V K+   W+ ++
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 391 TG---YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                + K  LA++A        L +++P    +  +LS
Sbjct: 378 GACRIHSKMELAEKAAN-----SLLELQPQNPGHYVLLS 411



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 140/274 (51%), Gaps = 7/274 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C     L  G  +H  ++K G   D  +   L+DMYAKC  +  A  +F++ML +++
Sbjct: 108 IRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDL 167

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT +M G   + NA   L LF +M    V P++  + T + A   L ++      +  
Sbjct: 168 VTWT-VMIGAYADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDY 226

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++GF  + ++G ++IDMY+KCG +  A  +FD M  K++I+W+AMIA Y   G     
Sbjct: 227 IVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDA 286

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           + LF  M     +P+  TF S L AC   G +  G +   F  +    ++V+  +     
Sbjct: 287 IDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLR---FFNSMWEEHAVRPDVKHYTC 343

Query: 257 LVDFYVKCGCLVEARRVFD-LIEQKSVISWSSLI 289
           +VD   + G L EA R+ + +  +K    WS+L+
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 25/220 (11%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +Q+HA+     +  D  ++N ++  Y +   ID+A  LF+ + +++  TW+V++ G+ K 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI-- 454
           G        FR++L   V PD      V+  C      + +     R+ +D  +K  +  
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCR-----DRTDLQIGRVIHDVVLKHGLLS 134

Query: 455 EHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA---CRVHGDLELGREVG 509
           +H+ C  +VD   +   +++A+ L E M  K  +  W  ++ A   C  +  L L     
Sbjct: 135 DHFVCASLVDMYAKCIVVEDAQRLFERMLSK-DLVTWTVMIGAYADCNAYESLVLFDR-- 191

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
              +R +G  P    M++ +       N C +L  + R++
Sbjct: 192 ---MREEGVVPDKVAMVTVV-------NACAKLGAMHRAR 221


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/643 (35%), Positives = 355/643 (55%), Gaps = 37/643 (5%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+  YA   ++  A  VFD++ ERNV+    ++  ++ NG     + +F  M   +V+P+
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            +T    +KA     ++  G +IHG   K G      VGN ++ MY KCG ++EA  + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            M  + +++WN+++ GY      D  L + R+M+      D  T  S L A  +      
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT----- 254

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
                    T    Y         + D + K G             +KS++SW+ +I  Y
Sbjct: 255 --------TTENVMY---------VKDMFFKMG-------------KKSLVSWNVMIGVY 284

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
            +     EA+EL+ ++     + D   ++S++    D + +  GK+IH Y  +     + 
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            + N+++DMY KCG +++A ++F  M  ++VV+WT +I+ YG  G   +AV LF K+   
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            + PD +A++  L+ACSH+GL+EE +  F  + +  ++ PR+EH +C+VD LGRAG++ E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
           A   I+ M ++P+  +W  LL ACRVH D ++G    + L +L  +    YV++SNI+A 
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
           AG W E   +R + +SKGLKK  G S VEV++ IH F  GD +HP +++I++ L  + K+
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584

Query: 593 MKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ-PGKVIRVFKNL 651
           MK ELG+V   + ALHD++EE KE  L VHSEKLAI  AL+     E+     IR+ KNL
Sbjct: 585 MK-ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+CGDCH   K +S+I     ++RD  RFH F  GVCSCGDYW
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 43/412 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  +  G ++HG+  K+G S  L + N L+ MY KCG ++ A  V D+M  R+V
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+ QN      L +  +M S  +  +  T+++      +L +V N    + M
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS------LLPAVSNTTTENVM 260

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K              DM+ K G+             KSL++WN MI  Y+      + 
Sbjct: 261 YVK--------------DMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEA 293

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L+ +M+  G  PD  + TS L ACG   ++  G +IHG++       ++  ++  +L+
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL--LLENALI 351

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCGCL +AR VF+ ++ + V+SW+++I  Y       +A+ LF +L++  L  D  
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 319 VLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
              + +   +   L+E+G+   ++     K+   L+      +VD+  + G + EA    
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRFI 469

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +M ++ N   W  ++     H  +   +GL     L  + P+   Y  +LS
Sbjct: 470 QDMSMEPNERVWGALLGACRVH--SDTDIGLLAADKLFQLAPEQSGYYVLLS 519


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/641 (33%), Positives = 361/641 (56%), Gaps = 7/641 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H    K+G   +  + + LID Y+ C  ++ A  VF+ ++ ++ V WTA++  + +N  
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +    +F +M  S  KPN F L++ +KA+  L SV  G  IHG  +K+  +  P VG +
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY+KCG I +A   F+++P   +I  + MI+ Y  +  +++   LF ++     +P+
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
           E++ +S L+AC ++  +  G QIH   I  G  +     +  +L+DFY KC  +  + ++
Sbjct: 364 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIG--HESDLFVGNALMDFYAKCNDMDSSLKI 421

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           F  +   + +SW+++++G++Q     EA+ +F +++   +       SS++   A  A +
Sbjct: 422 FSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASI 481

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
               QIH    K     DT + NS++D Y KCG I +A ++F  +  +++++W  II+GY
Sbjct: 482 RHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGY 541

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG A +A+ LF +M   +VE + + ++A+LS CS +GLV      F  +  D  +KP 
Sbjct: 542 ALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPS 601

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+CIV  LGRAGRL++A   I  +P  PS  +W+ LLS+C +H ++ LGR   E +L
Sbjct: 602 MEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKIL 661

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            ++  +   YV++SN++A AGS ++   LRK  R+ G++KV G SWVE+  EIH F  G 
Sbjct: 662 EIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGS 721

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
             HP    I+ +L  +  +   E G++  +   LHD+ +E K   L VHSE+LA+   LV
Sbjct: 722 VDHPDMRVINAMLEWLNLKTSRE-GYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLV 780

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
                  PG  IR+ KNLR C DCH     +SKI+K   +V
Sbjct: 781 M----TPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 245/478 (51%), Gaps = 18/478 (3%)

Query: 31  GVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           G  +HG +V+ G     DL   N L++MY K G +  A  +FD+M ERN+VS+  L+   
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            Q G+ +A  +LF ++     + N+F L+T +K +  + +      +H    K G + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            VG+ +ID YS C  +++A  +F+ +  K  + W AM++ Y      +    +F KM+  
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ F  TS LKA   L SV  G  IHG  I +      +  + G+L+D Y KCG + 
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT--LNDTEPHVGGALLDMYAKCGDIK 315

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR  F++I    VI  S +I  YAQ     +A ELF +L   S+  + + LSS++    
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           +   ++ GKQIH +A K+    D  V N+++D Y KC  +D + ++F+ +   N V+W  
Sbjct: 376 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNT 435

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS------HSGLVEESQEYFS 442
           I+ G+ + GL +EA+ +F +M    +    V Y +VL AC+      H+G +  S E  S
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK-S 494

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              ND  +       + ++D+  + G + +A  + + + ++  I  W  ++S   +HG
Sbjct: 495 TFNNDTVIG------NSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHG 545



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 218/408 (53%), Gaps = 10/408 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C  +++L  G+  HG  +K     +  +   L+DMYAKCG++  A   F+ +   +V+  
Sbjct: 275 CLPSVVLGKGI--HGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           + ++  + Q+   +    LF ++  SSV PNE++LS+ ++A   +  ++ G QIH   +K
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G E +  VGN+++D Y+KC  ++ + ++F  +   + ++WN ++ G+  +G  ++ L +
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +MQ       + T++S L+AC S  S+    QIH  +  S F  +  TVI  SL+D Y
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTF--NNDTVIGNSLIDTY 510

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCG + +A +VF  + ++ +ISW+++I GYA     A+A+ELF ++ + +++ +     
Sbjct: 511 AKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFV 570

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
           +++ V +   LV  G  +   + ++  G+  S+ +   IV +  + G +++A +   ++P
Sbjct: 571 ALLSVCSSTGLVNHGLSLFD-SMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIP 629

Query: 380 -VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              + + W  +++    H     A+G F    + ++EP       +LS
Sbjct: 630 SAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLS 675



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S++     L+  L+ C+  + LD+G Q+H   +K+G   DL + N L+D YAKC +M+ +
Sbjct: 359 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 418

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F  + + N VSW  ++ GF Q+G  +  LS+FC+M ++ +   + T S+ ++A    
Sbjct: 419 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 478

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S+ +  QIH    KS F  + V+GNS+ID Y+KCG I +A ++F  +  + +I+WNA+I
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAII 538

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGF 245
           +GY L G +   L LF +M +     ++ TF + L  C S G V  G  +   + I  G 
Sbjct: 539 SGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGI 598

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLA 299
             S++      +V    + G L +A + + D+    S + W +L+      +N+A
Sbjct: 599 KPSMEHYTC--IVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 111/215 (51%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F     L+ C + G   GG  +HG ++  G    +    A  L++ Y K G L  ARR
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + +++++S+ +L+  +AQ  +   A  LFR+LR    +V+ FVL++M+ +      
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
                 +H+ A K+    +  V + ++D Y  C L+ +A  +FN +  K+ V WT +++ 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           Y ++   + A  +F KM +   +P+  A  +VL A
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKA 272


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/675 (35%), Positives = 353/675 (52%), Gaps = 39/675 (5%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C K   L  G  +H  L +   +    + N L+ MY  CG       VFD+ML +N+VSW
Sbjct: 97  CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSW 156

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
             ++  + +NG  +  + LF  M +S ++PN     + +++    S +E G Q+H   ++
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIR 216

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +    N  V  +I +MY +CG +  A  +FD M A++ +TW  ++ GY  A   +  L L
Sbjct: 217 AQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +M   G   DEF F+  LK C  L     G QIH  ++  G    V   +   LVDFY
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVS--VGTPLVDFY 334

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
           VKCG +  A R F  I + + +SWS+LI G++Q   L + +++F  LR   + ++ F+ +
Sbjct: 335 VKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYT 394

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMP 379
           S+    A  A +  G Q H  A K   GL + +   +++V MY KCG +D A   F  + 
Sbjct: 395 SVFQACAAQANLNMGSQAHGDAIK--RGLVSYLYGESAMVTMYSKCGRLDYARRAFESID 452

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             + V WT II+GY  HG A EA+G FR+M    V P+ V ++AVL+ACSHSGLV E+++
Sbjct: 453 EPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           Y   +  D  +KP I+HY C++D+  RAG L EA  LI  MP +P    W++LL  C  H
Sbjct: 513 YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAH 572

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            DL+LG+   E L RLD  +   Y+++ N+++  G W E   +RKL   + LKK    SW
Sbjct: 573 CDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSW 632

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           + V  ++H         P+       L+  E  +   L                +++E L
Sbjct: 633 ISVKGQVH--------RPVR------LLNEEDDVSCSL---------------PARKEQL 663

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLAI   L+    + +    I VFKNLR C DCHEF K +S +     VVRD+TR
Sbjct: 664 LDHSEKLAIAFGLI----STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTR 719

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ G CSC DYW
Sbjct: 720 FHHFKSGKCSCNDYW 734



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 238/475 (50%), Gaps = 20/475 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C     L+ G Q+H  +++   + ++ +   + +MY +CG + GA  VFD M  +N 
Sbjct: 195 LQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNA 254

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT LM G+ Q    +  L LF +M    V+ +EF  S  +K    L   + G QIH  
Sbjct: 255 VTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSH 314

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    VG  ++D Y KCG I  A R F  +   + ++W+A+I+G+  +G  +  
Sbjct: 315 IVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDC 374

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F  ++  G + + F +TS  +AC +  ++  G+Q HG  I  G    +      ++V
Sbjct: 375 IKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG--ESAMV 432

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG L  ARR F+ I++   ++W+++I GYA   N AEA+  FR+++   ++ +  
Sbjct: 433 TMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAV 492

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFN 376
              +++   +   LV + KQ     ++   G+  ++   + ++D Y + GL+ EA EL N
Sbjct: 493 TFIAVLTACSHSGLVAEAKQYLGSMSR-DYGVKPTIDHYDCMIDTYSRAGLLXEALELIN 551

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAK----EAVGLFRKMLLDDVEP-DGVAYLAVLSACSH 430
            MP + + ++W  ++ G   H   K     A  LFR      ++P D   Y+ + +  S 
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFR------LDPGDTAGYILLFNLYSA 605

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIE-HYSCIVDSLGRAGR-LDEAKNLIESMPVK 483
            G  EE+  +  +L  ++ +K  +   +  +   + R  R L+E  ++  S+P +
Sbjct: 606 FGKWEEAG-HVRKLMAERELKKEVSCSWISVKGQVHRPVRLLNEEDDVSCSLPAR 659



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 204/413 (49%), Gaps = 6/413 (1%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G  K       +M  + V     +     +A G L S+ +G  IH    ++    +  
Sbjct: 64  KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + N ++ MY  CG   +  ++FD M  K+L++W  +I+ Y   G  +K + LF  MQ  G
Sbjct: 124 IENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+   + S L++C     +  G Q+H  +I +    ++   +  ++ + YV+CG L  
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANI--TVETAICNMYVRCGWLEG 241

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A+ VFD ++ ++ ++W+ L++GY Q + L  A+ELF ++    +++D FV S ++ V   
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
               + GKQIH++  K+    + SV   +VD Y+KCG I+ A   F  +   N V+W+ +
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCNDK 448
           I+G+ + G  ++ + +F  +  + V  +   Y +V  AC + + L   SQ +   +   +
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAI--KR 419

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            +   +   S +V    + GRLD A+   ES+  +P    W  ++S    HG+
Sbjct: 420 GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH---AYAAK 345
           ++  +++  L EA +  +++ +  + V       +         +  G+ IH       K
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
            PSG   S+ N ++ MY  CG   +  ++F+EM +KN+V+W ++I+ Y K+G  ++A+ L
Sbjct: 119 NPSG---SIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M    + P+   Y+++L +C     +E  ++  S +    ++   I   + I +   
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIR-AQLNANITVETAICNMYV 234

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           R G L+ AK + + M  + ++  W  L+        LE+  E+
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVT-WTGLMVGYTQAKKLEVALEL 276


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/668 (32%), Positives = 358/668 (53%), Gaps = 43/668 (6%)

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNI 120
           ++ A  VFD    R++ +WT+++ G  + G     +  F +M     +  PN F L+  +
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK--- 177
           +    L  VE+G +IHG  ++SG   + V+ N+++DMY+KCG    A R F  M  K   
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193

Query: 178 ----------------------------SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
                                        + +WN +++G +  G++ + L   ++M   G
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAG 253

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                +T++      G L S   G Q+HG ++ +         +  SL+D Y KCG +  
Sbjct: 254 VTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEED--AFVGCSLMDMYCKCGEMES 311

Query: 270 ARRVFDL---IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           A  +FD      +    +WS+++ GY Q     EA+E FR++    +    F+L+S+   
Sbjct: 312 ALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASA 371

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A+  +VEQG+Q+H +  K+    D  ++++IVDMY K G +++A  +F     KNV  W
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALW 431

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
           T ++  Y  HG  + A+ +F +M  + + P+ +  +AVLSACSHSGLV +   YF+ +  
Sbjct: 432 TTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQE 491

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           +  + P  EHY+C+VD  GRAG LD+AKN IE   +     +W+TLLSACR+H  +E  +
Sbjct: 492 EYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQ 551

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
              E L++L+  +  +YV+MSN++A    W +  +LR   + + ++K  G+SW+ +   +
Sbjct: 552 LASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVV 611

Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
           H F   D +HP + +I+  L ++ +R+K E+G+       +HDI+EE +E SL+ HSEKL
Sbjct: 612 HRFVALDTSHPRSAEIYAYLEKLMERLK-EMGYTSRTDLVVHDIEEEQRETSLKFHSEKL 670

Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           AI   ++    +   G  +R+FKNLRVC DCHE IK +++      VVRD  RFH F+ G
Sbjct: 671 AIAFGII----STPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDG 726

Query: 687 VCSCGDYW 694
            CSC D+W
Sbjct: 727 QCSCEDFW 734



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 44/421 (10%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE------------ 62
           LA  LRCC+    ++ G ++HG +++ G   D++L N ++DMYAKCG+            
Sbjct: 129 LAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMA 188

Query: 63  -------------------MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                              + GA  +FD+   R+V SW  ++ G +++G+    L    Q
Sbjct: 189 QKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQ 248

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  + V  + +T S     +G+LSS + G Q+HG  + +  E +  VG S++DMY KCG 
Sbjct: 249 MVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGE 308

Query: 164 INEAARMFDV---MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
           +  A  +FD            W+ M+AGYV  G  ++ L  FR+M   G    +F  TS 
Sbjct: 309 MESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSV 368

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
             AC + G V  G Q+HGF+   G  +     +A ++VD Y K G L +A R+F   + K
Sbjct: 369 ASACANAGMVEQGRQVHGFVEKLGHRFDAP--LASAIVDMYSKSGSLEDACRIFRSAQTK 426

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-- 338
           +V  W++++  YA       A+E+F +++   +  +   L +++   +   LV  G    
Sbjct: 427 NVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYF 486

Query: 339 --IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN-VVTWTVIITGYGK 395
             +      VP   +T   N +VD+Y + GL+D+A     E  + +  V W  +++    
Sbjct: 487 NLMQEEYGIVP---NTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRL 543

Query: 396 H 396
           H
Sbjct: 544 H 544



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 2/186 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+   +++ G Q+HG + K+G  FD  L + ++DMY+K G +  AC +F     +NV  W
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALW 431

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T ++C +  +G  +  L +F +M +  + PNE TL   + A      V +G     +  +
Sbjct: 432 TTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQE 491

Query: 142 S-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGL 199
             G   N    N ++D+Y + G +++A    +    +   + W  +++   L  + +   
Sbjct: 492 EYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQ 551

Query: 200 LLFRKM 205
           L   K+
Sbjct: 552 LASEKL 557


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 225/666 (33%), Positives = 373/666 (56%), Gaps = 12/666 (1%)

Query: 32  VQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLERNVVSWTALMCGF 88
            +LH  L V    S   +L++ L   YA+ G++  A +          ++ +W AL+   
Sbjct: 20  TRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAH 79

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            +  +    L +F  +  ++ +P+  T +  + A   L  +  G  +      +G+  + 
Sbjct: 80  SRGASPHEALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDI 138

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V +S++++Y+KCG +++A ++FD M  +  +TW+ M+ G+V AG   + + ++ +M+  
Sbjct: 139 FVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRD 198

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G   DE      ++AC + G    G  +HG+L+       V  VI+ SLVD Y K G   
Sbjct: 199 GLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDV--VISTSLVDMYAKNGLFD 256

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +ARRVF+L+  ++ +SWS+LI   AQ  N  EA+ LFR ++   L  +   +   +   +
Sbjct: 257 QARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACS 316

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           D  L++ GK IH +  +    LD  V  +++DMY KCG +  A  LF+++  +++++W V
Sbjct: 317 DLGLLKLGKSIHGFILRTLE-LDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNV 375

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I   G HG  ++A+ LF++M  ++V PD   + ++LSA SHSGLVEE + +F+ + N+ 
Sbjct: 376 MIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEY 435

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P  +H  CIVD L R+G ++EA  L+ S+  KP+I+I   LLS C  +  LELG   
Sbjct: 436 GIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGEST 495

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E +L L   +     ++SN++A A +W +   +RKL +  G KK  G S +E+   +H 
Sbjct: 496 AEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHT 555

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F   D +HP   +I Q++M+++  M+ ++G++   ++  HD++E  KE+ L  HSE+LA 
Sbjct: 556 FVMEDQSHPQHRQILQMVMKLDSEMR-KMGYIPKTEFVYHDLEEGVKEQLLSRHSERLAT 614

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L    LN  PG  + V KNLRVCGDCH+ IK +SKI     VVRDA RFH F+ G C
Sbjct: 615 AFGL----LNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGAC 670

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 671 SCGDYW 676



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 134/267 (50%), Gaps = 4/267 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+       G  +HG L++     D++++  L+DMYAK G  + A  VF+ M  RN 
Sbjct: 211 MQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRND 270

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+AL+    Q GNA   L LF  M  S + PN   +   + A   L  ++ G  IHG 
Sbjct: 271 VSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGF 330

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +++  E + +VG ++IDMYSKCG ++ A  +FD + ++ LI+WN MIA     G     
Sbjct: 331 ILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDA 389

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS-GFPYSVKTVIAGSL 257
           L LF++M+ +   PD  TF S L A    G V  G      ++   G     K ++   +
Sbjct: 390 LSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVC--I 447

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVIS 284
           VD   + G + EA  +   +  K  IS
Sbjct: 448 VDLLARSGLVEEANGLVASLHSKPTIS 474


>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
 gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
          Length = 551

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/544 (37%), Positives = 332/544 (61%), Gaps = 3/544 (0%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           SL+ C +      G  +H  ++  GF+ ++ L+  LI  Y+K G+   A  VFD+M ER 
Sbjct: 3   SLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW+A + G+ QNG  +  L +F  M  +  K N+FT  + ++A   L  ++ GMQI G
Sbjct: 63  VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG 122

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              KS F  N +V ++++D++SKCG++ +A+ +F +M  + +++WNA+I  Y + G+S  
Sbjct: 123 CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGD 182

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
              +FR M + G  PD FTF S LKA G    V    QIH  +I  G  Y     ++GSL
Sbjct: 183 SFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLG--YGSHISLSGSL 240

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVD 316
           +D Y KC  L  A  ++  +  K +IS ++L+ GYA++ N + +A++LF+++++  +++D
Sbjct: 241 IDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKID 300

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
             +L SM  + A+ + +  G+QIHA A K     D ++ N+++DMY K G I +A   FN
Sbjct: 301 DVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFN 360

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           EM  KNV++WT +ITGYG HG   EA+ LF+KM  + ++P+ + +L++L AC+H GL  E
Sbjct: 361 EMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGE 420

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             E F+ + +   + PR EH+SC+VD   R G L+EA NLI  M +KP+ ++W  +L AC
Sbjct: 421 GWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGAC 480

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
            ++G++ L  E    L ++D +N VNYV++++I+A AGSW+   ++RKL   + LKK  G
Sbjct: 481 YIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPG 540

Query: 557 RSWV 560
            S++
Sbjct: 541 YSFI 544



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L      C+    L  G Q+H   +K   ++D+ + N LIDMYAK GE+  A   F++M 
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NV+SWT+L+ G+  +G+    ++LF +M    +KPN+ T  + + A         G +
Sbjct: 364 EKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWE 423

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM---PAKSLITWNAMIAGYV 190
             + M  K          + ++D++++ G + EA  + + M   P  SL  W A++    
Sbjct: 424 CFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASL--WGAILGACY 481

Query: 191 LAG 193
           + G
Sbjct: 482 IYG 484


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/710 (32%), Positives = 377/710 (53%), Gaps = 66/710 (9%)

Query: 27  LLDYGVQ--LHGALVKMGFSFDLMLNNDLIDMYAK-CGEMNGACAVFDKMLERNVVSWTA 83
           L D GV   L   ++K GF  D+++   ++++Y +    ++ A   FD M+ERN  +W+ 
Sbjct: 236 LQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWST 295

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVK--PNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           ++      G   A ++++   G   VK  P++  L T +   G ++             +
Sbjct: 296 MIAALSHGGRIDAAIAVY---GRDPVKSIPSQTALLTGLARCGRITEA-----------R 341

Query: 142 SGFEWNP----VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             FE  P    V  N++I  Y + G ++EA  +FD MP ++ I+W  MIAGY   G S++
Sbjct: 342 ILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEE 401

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L L + +  +G +P   + TS+  AC  +G++  G Q+H   + +G  ++  + +  +L
Sbjct: 402 ALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFN--SYVCNAL 459

Query: 258 VDFYVKC-------------------------------GCLVEARRVFDLIEQKSVISWS 286
           +  Y KC                                 L +AR +FD +  + V+SW+
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWT 519

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           ++I  YAQ E   EA+E F+ +     + +  +L+ ++ V       + G+QIH  A K 
Sbjct: 520 TIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIK- 578

Query: 347 PSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
             G+D+   V+N+++ MY KCG  D + ++F+ M  +++ TW   ITG  +HGL +EA+ 
Sbjct: 579 -HGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIK 636

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           ++  M    V P+ V ++ +L+ACSH+GLV+E  ++F  +  D  + P +EHY+C+VD L
Sbjct: 637 MYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLL 696

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GR G +  A+  I  MP++P   IW  LL AC++H + E+GR   E L   +  N  NYV
Sbjct: 697 GRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYV 756

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           M+SNI++  G W E   LRK+ + +G+ K  G SW+++  ++H F  GD  H   E+I  
Sbjct: 757 MLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDY 816

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
            L ++   ++   G+V   ++ LHDI EE KE SL  HSEKLA+   L    L    G  
Sbjct: 817 TLQDLYTLLRGT-GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGL----LVTPKGMP 871

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           I++ KNLR+CGDCH FIK +S + K    +RD  RFH F  G CSCGD+W
Sbjct: 872 IQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/548 (22%), Positives = 245/548 (44%), Gaps = 53/548 (9%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           S D+   N ++  Y    +M  A  +F +M +RN+V+WT ++ G+++         +F  
Sbjct: 154 SRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRM 213

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK-CG 162
           M      P++   ++ + A   L  +     +  + +K+GFE + V+G SI+++Y++   
Sbjct: 214 MHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDAS 273

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            ++ A + FD M  ++  TW+ MIA     G  D  + ++ +      IP +    + L 
Sbjct: 274 ALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGLA 332

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            CG +            ++    P  +  V   +++  Y++ G + EA+ +FD +  ++ 
Sbjct: 333 RCGRI--------TEARILFEQIPDPI-VVSWNAMITGYMQNGMVDEAKELFDRMPFRNT 383

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ISW+ +I GYAQ     EA++L + L    +      L+S     +    +E G+Q+H+ 
Sbjct: 384 ISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSL 443

Query: 343 AAKVPSGLDTSVSNSIVDMYLKC-------------------------------GLIDEA 371
           A K     ++ V N+++ MY KC                                ++++A
Sbjct: 444 AVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDA 503

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ M  ++VV+WT II+ Y +     EAV  F+ ML +  +P+      +LS C   
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G  +  Q+  + +     M   +   + ++    + G  D  K + +SM  +  I  W T
Sbjct: 564 GSAKLGQQIHT-VAIKHGMDSELIVANALMSMYFKCGCADSHK-VFDSMEER-DIFTWNT 620

Query: 492 LLSACRVHGDLELGREVGEILLRLDG----DNPVNYVMMSNIHADAGSWNE-CERLRKLA 546
            ++ C  HG   LGRE  ++   ++      N V +V + N  + AG  +E  +  + ++
Sbjct: 621 FITGCAQHG---LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMS 677

Query: 547 RSKGLKKV 554
           R  GL  +
Sbjct: 678 RDYGLTPL 685



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 56/467 (11%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+  YA+ G +  A  VFD M ERN V+W A++  ++QNG+      LF  M S  V   
Sbjct: 101 LLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVT-- 158

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
                                            WN     S++  Y    ++ +A  +F 
Sbjct: 159 --------------------------------SWN-----SMVTGYCHSRQMVDAWNLFK 181

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            MP ++L+TW  MI+GYV      KG  +FR M   G  PD+  F S L A   L  +G 
Sbjct: 182 QMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGV 241

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE-ARRVFDLIEQKSVISWSSLILG 291
              +   ++ +GF   V  VI  S+++ Y +    ++ A + FD + +++  +WS++I  
Sbjct: 242 LEVLRPLVLKTGFESDV--VIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAA 299

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
            +    +  A+ ++ +   +S       + S   +    A   +  +      ++P  + 
Sbjct: 300 LSHGGRIDAAIAVYGRDPVKS-------IPSQTALLTGLARCGRITEARILFEQIPDPIV 352

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            S  N+++  Y++ G++DEA ELF+ MP +N ++W  +I GY ++G ++EA+ L + +  
Sbjct: 353 VSW-NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHR 411

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC--IVDSLGRAGR 469
           + + P   +  +   ACSH G +E  ++  S      +   +   Y C  ++   G+   
Sbjct: 412 NGMLPSLSSLTSSFLACSHIGALETGRQVHSLAV---KAGCQFNSYVCNALISMYGKCRN 468

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           ++  + +   M VK +++ W + ++A   +  LE  R + + +L  D
Sbjct: 469 MEYVRQVFNRMRVKDTVS-WNSFIAALVQNNMLEDARHIFDNMLSRD 514



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 132/303 (43%), Gaps = 38/303 (12%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM----------------- 63
            CS    L+ G Q+H   VK G  F+  + N LI MY KC  M                 
Sbjct: 427 ACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS 486

Query: 64  --------------NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV 109
                           A  +FD ML R+VVSWT ++  + Q       +  F  M     
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE 546

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           KPN   L+  +   G L S + G QIH + +K G +   +V N+++ MY KCG   ++ +
Sbjct: 547 KPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHK 605

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD M  + + TWN  I G    G   + + ++  M+  G +P+E TF   L AC   G 
Sbjct: 606 VFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGL 665

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARR-VFDLIEQKSVISWS 286
           V  G Q   F  +    Y +  ++     +VD   + G +  A + ++D+  +   + WS
Sbjct: 666 VDEGWQ---FFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWS 722

Query: 287 SLI 289
           +L+
Sbjct: 723 ALL 725



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           V   LD S  ++ +    + G + EA E+F+ MP ++++ W  +I+ Y   G+ ++A   
Sbjct: 27  VHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA--- 83

Query: 406 FRKMLLDDVEPDGVAYLAV-LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
             ++L D +    V    + LS  +  G V +++  F     D   +     ++ +V   
Sbjct: 84  --RILFDAISGGNVRTATILLSGYARLGRVLDARRVF-----DGMPERNTVAWNAMVSCY 136

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            + G +  A+ L ++MP +  +  W ++++
Sbjct: 137 VQNGDITMARRLFDAMPSR-DVTSWNSMVT 165


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/692 (33%), Positives = 370/692 (53%), Gaps = 37/692 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +LH  ++  G   D  L N+L+ +Y K G ++ A A FD++  +NV SWT ++  F QNG
Sbjct: 55  ELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQNG 114

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + +  L LF QM    VK NE TL+  +     +  +  G  IHG  + +  + + V+GN
Sbjct: 115 HHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA--KKDVVIGN 172

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++++MYSKCG + EA   F  M  + +++W  MI      G  ++ + +F +M      P
Sbjct: 173 ALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVAP 232

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +E +  + L AC +LG       IH F+ + G     K V+A +L+  Y +CG   +ARR
Sbjct: 233 NEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARR 292

Query: 273 VFDLIEQ--KSVISWSSLILGYAQEENLAEAMELFRQL--RERSLQVDGFVLSSMMGVFA 328
           VFD ++   ++ +SW+S+I  Y   E     +EL++++  RE S ++D      ++   +
Sbjct: 293 VFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACS 352

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             + ++ G+Q+H        G +  ++ +IV+MY KCG + EA E+F+ M  +N++ W  
Sbjct: 353 SLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNS 412

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++ GY +HG  K A+ LF    LD V PD + ++ +L+ACSH+G+V+    +F  +  D 
Sbjct: 413 MMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSIRADF 472

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA----IWQTLLSACRVHGDLEL 504
            M+P ++HY C+VD LGRAG LD A+ L+E MP   + A     W  LL++C+VH D++ 
Sbjct: 473 GMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDVKR 532

Query: 505 GREVGEILLRLDG----------------DNPVNYVMMSNIHADAGSWNECERLRKLAR- 547
              +  +L                     ++    VM+SNI+A A  W E   +R     
Sbjct: 533 AARISSVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKKWEEMTGVRNEITE 592

Query: 548 --SKGL--KKVAGRSWVEVDKEIHFFYGGD-DTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
             SKG+   +  G S++EV+  IH F  G    HP  + I   +  +E+ +K   G+V  
Sbjct: 593 EWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSA-GYVPD 651

Query: 603 VKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIK 662
               +HD++E  KE  L  HSE++AI   L+RGG +     ++RV  NLR+C DCH  +K
Sbjct: 652 TSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSD----TIVRVVNNLRICSDCHAAVK 707

Query: 663 GLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +SK +    +VRD  RFH F  G CSC DYW
Sbjct: 708 LISKTVGREILVRDTRRFHHFASGECSCQDYW 739



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L  G Q+H  +V  GF  +L L   +++MY KCG +  A  VFD M  RN+
Sbjct: 348 LEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNM 407

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W ++M G+ Q+G+ K  L LF       V P+E T  T + A      V+ G+  H  
Sbjct: 408 IAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVW-HFG 466

Query: 139 CMKSGFEWNPVVGNSI--IDMYSKCGRINEAARMFDVMPAKS-----LITWNAMIA 187
            +++ F   P V + +  +DM  + G ++ A R+ + MPA S      + W A++A
Sbjct: 467 SIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLA 522


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 233/669 (34%), Positives = 358/669 (53%), Gaps = 17/669 (2%)

Query: 28  LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L +G  LH  + +MG  +  ++L N ++ MY +C  +  A  +FD+M E N VS T ++ 
Sbjct: 99  LSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            + + G     + LF  M +S  KP     +T +K+     +++ G QIH   +++G   
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS 217

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N  +   I++MY KCG +  A R+FD M  K  +    ++ GY  AG +   L LF  + 
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G   D F F+  LKAC SL  +  G QIH  +   G    V   +   LVDFY+KC  
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS--VGTPLVDFYIKCSS 335

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFVLSSMMG 325
              A R F  I + + +SWS++I GY Q     EA++ F+ LR ++  + + F  +S+  
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +  A    G Q+HA A K          ++++ MY KCG +D+A E+F  M   ++V 
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT  I+G+  +G A EA+ LF KM+   ++P+ V ++AVL+ACSH+GLVE+ +     + 
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               + P I+HY C++D   R+G LDEA   +++MP +P    W+  LS C  H +LELG
Sbjct: 516 RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 575

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
              GE L +LD ++   YV+  N++  AG W E   + KL   + LKK    SW++   +
Sbjct: 576 EIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGK 635

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F  GD  HP T++I++       ++KE  GF+ G  +  +  +   + E L  HSE+
Sbjct: 636 IHRFIVGDKHHPQTQEIYE-------KLKEFDGFMEGDMFQCNMTE---RREQLLDHSER 685

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI   L+   ++      I+VFKNLR C DCHEF K +S +     V+RD+ RFH F+ 
Sbjct: 686 LAIAFGLI--SVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKE 743

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 744 GKCSCNDYW 752



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 12/309 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G Q+H  + K+G   ++ +   L+D Y KC     AC  F ++ E N 
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW+A++ G+ Q    +  +  F  + S +    N FT ++  +A  VL+    G Q+H 
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K     +    +++I MYSKCG +++A  +F+ M    ++ W A I+G+   G + +
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
            L LF KM   G  P+  TF + L AC   G V  G      L T    Y+V   I    
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC---LDTMLRKYNVAPTIDHYD 528

Query: 256 SLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAE---AMELFRQLRER 311
            ++D Y + G L EA +   ++  +   +SW   + G    +NL     A E  RQL   
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588

Query: 312 SLQVDGFVL 320
                G+VL
Sbjct: 589 --DTAGYVL 595


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/564 (38%), Positives = 330/564 (58%), Gaps = 9/564 (1%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV-GNSIIDMYSKCGRINE 166
           S+ P+    S  +K    L  VE G  +H   + S F  N +V  N I++MY+KCG +++
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDD 141

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A RMFD MP K ++TW A+IAG+         LLLF +M   G  P+ FT +S LKA GS
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS 201

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
              +  GTQ+H F +  G+  SV   +  +LVD Y +CG +  A+  FD +  KS +SW+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSV--YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWN 259

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           +LI G+A++     A+ L  +++ ++ Q   F  SS+    A    +EQGK +HA+  K 
Sbjct: 260 ALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS 319

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
              L   + N+++DMY K G ID+A  +F+ +   +VV+W  ++TG  +HGL KE +  F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
            +ML   +EP+ +++L VL+ACSHSGL++E   YF  L    +++P + HY   VD LGR
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGR 438

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
            G LD A+  I  MP++P+ A+W  LL ACR+H ++ELG    E    LD  +    +++
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SNI+A AG W +  ++RK+ +  G+KK    SWVE++  +H F   D+THP  ++I    
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKW 558

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            E+  ++K E+G+V    + L  + ++ +EE L+ HSEKLA+  AL    LN   G  IR
Sbjct: 559 EEISGKIK-EIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFAL----LNTPTGSPIR 613

Query: 647 VFKNLRVCGDCHEFIKGLSKILKL 670
           + KN+RVCGDCH  IK +SKI + 
Sbjct: 614 IKKNIRVCGDCHAAIKFVSKIYEF 637



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 212/386 (54%), Gaps = 4/386 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNG 65
           SLV +    +  L+ C++   ++ G  +H  LV   F    L+L N +++MYAKCG ++ 
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDD 141

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+M  +++V+WTAL+ GF QN   +  L LF QM    ++PN FTLS+ +KASG 
Sbjct: 142 ARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS 201

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
              ++ G Q+H  C+K G++ +  VG++++DMY++CG ++ A   FD MP KS ++WNA+
Sbjct: 202 EHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNAL 261

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I+G+   G  +  L L  KMQ     P  FT++S   AC S+G++  G  +H  +I SG 
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGL 321

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              +   I  +L+D Y K G + +A+RVFD + +  V+SW++++ G AQ     E ++ F
Sbjct: 322 --KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            Q+    ++ +      ++   +   L+++G        K     D     + VD+  + 
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV 439

Query: 366 GLIDEATELFNEMPVK-NVVTWTVII 390
           GL+D A     EMP++     W  ++
Sbjct: 440 GLLDRAERFIREMPIEPTAAVWGALL 465


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/664 (36%), Positives = 358/664 (53%), Gaps = 48/664 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H   ++ G   D  ++  L+  YA      +N A  VF+ +   NV  +  ++ G LQ
Sbjct: 48  QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N      +  + +M  +  +PN+FT  T  KA     + E G+Q+H   +K G   +  +
Sbjct: 108 NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHI 167

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++ I MY   G +  A RM        +I +NAMI GY+  G  +    LF  M++   
Sbjct: 168 RSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMED--- 224

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
                      K  GS             ++ SG                  KCG + EA
Sbjct: 225 -----------KNVGSWN-----------VMVSGM----------------AKCGMIEEA 246

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R +F+ +++K+ ISWS++I GY +     EA+E+F  ++   ++   FVLSS++   A+ 
Sbjct: 247 RELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANL 306

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             ++QG+ IHAY     +  D  +  ++VDMY KCG +D A ++F +M  K V TW  +I
Sbjct: 307 GALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMI 366

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G G HG A++A+ LF KM      P+G+  L VLSAC+HSG+V+E    F+ +     +
Sbjct: 367 CGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGI 426

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P +EHY C+VD LGRAG L EA+ ++ SMP++PS A+W  LL ACR HGD+ELG  VG+
Sbjct: 427 EPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGK 486

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
           ILL L+  N   Y ++SNI+A AG W++   +RKL + +G+K   G S ++ D  +H F 
Sbjct: 487 ILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFK 546

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP  + I+ +L  M KR+K E GF       L DI+EE KE  L+ HSEKLAI  
Sbjct: 547 MGDGSHPQMKNIYLMLKNMIKRLKME-GFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAF 605

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L+    N +PG  I V KNLR+C DCH   K +S++     +VRD  R+H F+ G CSC
Sbjct: 606 GLI----NTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSC 661

Query: 691 GDYW 694
            D+W
Sbjct: 662 KDFW 665



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 74/339 (21%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA------------ 66
            + C+     + GVQ+H  ++K G S D+ + +  I MY   GE+ GA            
Sbjct: 137 FKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDV 196

Query: 67  ------------CA-------VFDKMLERNVVSW-------------------------- 81
                       C        +F  M ++NV SW                          
Sbjct: 197 ICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEK 256

Query: 82  -----TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
                +A++ G+++ G  K  L +F  M    ++P +F LS+ + A   L +++ G  IH
Sbjct: 257 NEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIH 316

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
                +   ++ V+G +++DMY+KCGR++ A  +F+ M  K + TWNAMI G  + G ++
Sbjct: 317 AYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAE 376

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG-----FLITSGFPYSVKT 251
             + LF KMQ+    P+  T    L AC   G V  G +I       + I  G  +    
Sbjct: 377 DAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHY--- 433

Query: 252 VIAGSLVDFYVKCGCLVEARRV-FDLIEQKSVISWSSLI 289
              G +VD   + G L EA  V + +  + S   W +L+
Sbjct: 434 ---GCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALL 469



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+    LD G  +H  +     SFD +L   L+DMYAKCG ++ A  VF+KM 
Sbjct: 296 LSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKME 355

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++ V +W A++CG   +G A+  + LF +M     +PN  TL   + A      V+ G++
Sbjct: 356 KKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLR 415

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           I + M    G E        ++D+  + G + EA  +   MP + S   W A++  
Sbjct: 416 IFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGA 471



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 36/234 (15%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL--IDEATELFNEMPVKNVVTWTVIITGYG 394
           KQ+HA A +     D  VS ++V  Y       ++ A ++F  +P  NV  + +II G  
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEES------ 437
           ++    +A+  + KM++    P+   Y  +  AC+           H+ ++++       
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166

Query: 438 ------QEY--FSRLCNDKRM-----KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
                 Q Y  F  +   +RM        +  ++ ++D   + G ++ AK L  SM  K 
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDK- 225

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           ++  W  ++S     G +E  R   E+   +   N +++  M + +   G + E
Sbjct: 226 NVGSWNVMVSGMAKCGMIEEAR---ELFNEMKEKNEISWSAMIDGYIKGGYYKE 276


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/667 (34%), Positives = 354/667 (53%), Gaps = 9/667 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G   H  L +M  S +  ++N ++ MY  C     A   FDK++++++ SW+ ++  
Sbjct: 108 LSDGKLFHNRLQRMANS-NKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISA 166

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + + G     + LF +M    + PN    ST I +    S ++ G QIH   ++ GF  N
Sbjct: 167 YTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAAN 226

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +   I +MY KCG ++ A    + M  K+ +    ++ GY  A  +   LLLF KM  
Sbjct: 227 ISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMIS 286

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G   D F F+  LKAC +LG +  G QIH + I  G    V   +   LVDFYVKC   
Sbjct: 287 EGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVS--VGTPLVDFYVKCARF 344

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR+ F+ I + +  SWS+LI GY Q      A+E+F+ +R + + ++ F+ +++    
Sbjct: 345 EAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQAC 404

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +  + +  G QIHA A K       S  ++++ MY KCG +D A + F  +   + V WT
Sbjct: 405 SAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWT 464

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II  +  HG A EA+ LF++M    V P+ V ++ +L+ACSHSGLV+E ++    + ++
Sbjct: 465 AIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDE 524

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P I+HY+C++D   RAG L EA  +I S+P +P +  W++LL  C  H +LE+G  
Sbjct: 525 YGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMI 584

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + + RLD  +   YV+M N++A AG W+E  + RK+   + L+K    SW+ V  ++H
Sbjct: 585 AADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVH 644

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F  GD  HP TE+I+  L E+    K+    +   + AL D  E  ++E L  HSE+LA
Sbjct: 645 RFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTE--RKEQLLDHSERLA 702

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   L+    +      I VFKN R C DCH+F K +S +     VVRD  RFH    G 
Sbjct: 703 IAYGLICTAADTP----IMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGE 758

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 759 CSCRDYW 765



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 6/287 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G Q+H   +K+G   ++ +   L+D Y KC     A   F+ + E N 
Sbjct: 300 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND 359

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW+AL+ G+ Q+G     L +F  + S  V  N F  +   +A   +S +  G QIH  
Sbjct: 360 FSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHAD 419

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G        +++I MYSKCG+++ A + F  +     + W A+I  +   G + + 
Sbjct: 420 AIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEA 479

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AGS 256
           L LF++MQ  G  P+  TF   L AC   G V  G +I   L +    Y V   I     
Sbjct: 480 LRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKI---LDSMSDEYGVNPTIDHYNC 536

Query: 257 LVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAM 302
           ++D Y + G L EA  V   L  +  V+SW SL+ G     NL   M
Sbjct: 537 MIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGM 583



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 5/308 (1%)

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
             R M + G   +  ++    K CG+LG++  G   H  L       +    I   ++  
Sbjct: 79  FIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA---NSNKFIDNCILKM 135

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y  C     A R FD I  + + SWS++I  Y +E  + EA+ LF ++ +  +  +  + 
Sbjct: 136 YCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIF 195

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           S+++  F D ++++ GKQIH+   ++    + S+   I +MY+KCG +D A    N+M  
Sbjct: 196 STLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTR 255

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           KN V  T ++ GY K    ++A+ LF KM+ + VE DG  +  +L AC+  G +   ++ 
Sbjct: 256 KNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQI 315

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            S  C    ++  +   + +VD   +  R + A+   ES+  +P+   W  L++     G
Sbjct: 316 HS-YCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH-EPNDFSWSALIAGYCQSG 373

Query: 501 DLELGREV 508
             +   EV
Sbjct: 374 QFDRALEV 381


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/645 (33%), Positives = 348/645 (53%), Gaps = 36/645 (5%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W  ++  + +    +  L+++ Q+     + + F   + +KA G +S  + G +IHG  +
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K G + +  VGN+++ MY +C  +  A  +FD M  + +++W+ MI         D  L 
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           L R+M      P E    S +       ++  G  +H ++I +     +      +L+D 
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILG----------------------------- 291
           Y KCG L  AR++F+ + QK+V+SW+++I G                             
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331

Query: 292 --YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
             YAQ   + +A  LF Q+R   ++     + S++ + A    ++ GK +H+Y  K    
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           +D  ++ ++VDMY KCG I+ A  LF E   +++  W  IITG+  HG  +EA+ +F +M
Sbjct: 392 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 451

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
               V+P+ + ++ +L ACSH+GLV E ++ F ++ +   + P+IEHY C+VD LGRAG 
Sbjct: 452 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 511

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           LDEA  +I+SMP+KP+  +W  L++ACR+H + +LG      LL ++ +N    V+MSNI
Sbjct: 512 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 571

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           +A A  W++   +RK  ++ G+KK  G S +EV+  +H F  GD +HP   +I+++L EM
Sbjct: 572 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 631

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFK 649
            +++ E  G+V      L +I EE KE +L  HSEKLA+   L+       P   IR+ K
Sbjct: 632 RRKLNEA-GYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTA----PSTPIRIVK 686

Query: 650 NLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           NLRVC DCH   K LSKI   V +VRD  RFH F  G CSCGDYW
Sbjct: 687 NLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 207/449 (46%), Gaps = 51/449 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C +      G ++HG ++K G   D+ + N L+ MY +C  +  A  VFDKM+ER+V
Sbjct: 131 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 190

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+ ++    +N      L L  +M    V+P+E  + + +      +++  G  +H  
Sbjct: 191 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAY 250

Query: 139 CMKSGFEWNPVVGNS--IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG-------- 188
            +++    +  V  +  ++DMY+KCG +  A ++F+ +  K++++W AMIAG        
Sbjct: 251 VIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLE 310

Query: 189 -----------------------YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
                                  Y  A   D+   LF +M+  G  P + T  S L  C 
Sbjct: 311 EARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 370

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
             G++  G  +H ++        V  ++  +LVD Y KCG +  A R+F     + +  W
Sbjct: 371 VAGALDLGKWVHSYIDKERV--EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 428

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-----IH 340
           +++I G+A      EA+++F ++  + ++ +      ++   +   LV +GK+     +H
Sbjct: 429 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 488

Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
            +      GL   + +   +VD+  + GL+DEA E+   MP+K N + W  ++     H 
Sbjct: 489 TF------GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH- 541

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                +G      L ++EP+   Y  ++S
Sbjct: 542 -KNPQLGELAATQLLEIEPENCGYNVLMS 569



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 82/219 (37%), Gaps = 50/219 (22%)

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           D + +EQ KQIHA+  K  +    ++   + D     GL   A              W  
Sbjct: 52  DLSTLEQTKQIHAHIIK--THFHHALQIPLND--FPSGLSPSA-------------QWNF 94

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY-------- 440
           +IT Y K    + A+ ++ ++   D E D     +VL AC      +  +E         
Sbjct: 95  VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154

Query: 441 ----------------------FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
                                 ++RL  DK M+  +  +S ++ SL R    D A  LI 
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 214

Query: 479 S---MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
               M V+PS     ++++      ++ +G+ +   ++R
Sbjct: 215 EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR 253


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/661 (34%), Positives = 360/661 (54%), Gaps = 43/661 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++     ++  L   L+  YA   ++  A  VFD++ ERNV+    ++  ++ NG 
Sbjct: 62  VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
            +  + +F  M S  VKP+ +T    +KA     ++  G +IHG   K G      VGN 
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNG 181

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++ MY KCG ++EA  + D M  + +++WN+++AGY      D  L + R+M+      D
Sbjct: 182 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHD 241

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
             T  S L A  +               T    Y         + D + K G        
Sbjct: 242 AGTMASLLPAVSNT-------------TTENVMY---------VKDMFFKMG-------- 271

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                +KS++SW+ +I  Y +     EA+EL+  +     + D   ++S++    D + +
Sbjct: 272 -----KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSAL 326

Query: 334 EQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             GK+IH Y  +   +P+ L   + N+++DMY KCG +D A ++F  M  ++VV+WT +I
Sbjct: 327 SLGKKIHGYIERKKLIPNLL---LENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMI 383

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + YG  G   +AV LF KM    + PD +A++  L+ACSH+GL+EE +  F  + +  ++
Sbjct: 384 SAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 443

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            PR+EH +C+VD LGRAG++ EA   I+ MP++P+  +W  LL ACRVH + ++G    +
Sbjct: 444 TPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAAD 503

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L +L  +    YV++SNI+A AG W E   +R + +SKGLKK  G S VEV++ IH F 
Sbjct: 504 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 563

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
            GD +HP + +I++ L  + K+MK ELG+V   + ALHD++EE KE  L VHSEKLAI  
Sbjct: 564 VGDRSHPQSAEIYRELDVLVKKMK-ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVF 622

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           AL+     E     IR+ KNLR+CGDCH   K +S+I     ++RD  RFH F  GVCSC
Sbjct: 623 ALMNTE-EEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681

Query: 691 G 691
            
Sbjct: 682 A 682



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 197/409 (48%), Gaps = 45/409 (11%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS N+++  G ++HG+  K+G S  L + N L+ MY KCG ++ A  V D+M  R+VVSW
Sbjct: 153 CSGNIVI--GKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 210

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            +L+ G+ QN      L +  +M S  +  +  T+++      +L +V N    + M +K
Sbjct: 211 NSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMAS------LLPAVSNTTTENVMYVK 264

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
                         DM+ K G+             KSL++WN MI  Y+      + + L
Sbjct: 265 --------------DMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVEL 297

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           +  M+  G  PD  + TS L ACG   ++  G +IHG++       ++  ++  +L+D Y
Sbjct: 298 YSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL--LLENALIDMY 355

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KCGCL  AR VF+ ++ + V+SW+++I  Y       +A+ LF ++++  L  D     
Sbjct: 356 AKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFV 415

Query: 322 SMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           + +   +   L+E+G+   ++     K+   L+      +VD+  + G + EA +   EM
Sbjct: 416 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYKFIQEM 473

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P++ N   W  ++     H  +   +GL     L  + P+   Y  +LS
Sbjct: 474 PMEPNERVWGALLGACRVH--SNTDIGLLAADKLFQLAPEQSGYYVLLS 520



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L  G ++HG + +     +L+L N LIDMYAKCG ++ A  VF+ M  R+V
Sbjct: 317 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDV 376

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++  +  +G     ++LF +M  S + P+     T + A      +E G     +
Sbjct: 377 VSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 436

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYS 195
            M   ++  P + +   ++D+  + G++ EA +    MP + +   W A++    +   +
Sbjct: 437 -MTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNT 495

Query: 196 DKGLLLFRKM 205
           D GLL   K+
Sbjct: 496 DIGLLAADKL 505



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
           ++ S +   F+L  ++  + D   +   + +H+         ++S+   ++  Y     +
Sbjct: 35  QKNSPKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDV 91

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A ++F+E+P +NV+   V+I  Y  +G  +E + +F  M    V+PD   +  VL AC
Sbjct: 92  ATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKAC 151

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S SG +   ++          +   +   + +V   G+ G L EA+ +++ M  +  ++ 
Sbjct: 152 SCSGNIVIGKKIHGS-ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS- 209

Query: 489 WQTLLSAC----RVHGDLELGREVGEILLRLDG 517
           W +L++      R    LE+ RE+  + +  D 
Sbjct: 210 WNSLVAGYAQNQRFDDALEVCREMESVKISHDA 242


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 341/592 (57%), Gaps = 8/592 (1%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           + C  N  ++YG  LHG  VK G    + + + L+DMY K G++     VF +M  RNVV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           SWTA++ G ++ G  K  L  F +M  S V+ + +T +  +KA     ++  G +IH   
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           MK GF+ +  V N++  MY+KCG++     +F+ M  + +++W  +I   V  G  +  +
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
             F +M+E    P+E+TF + +  C +L  +  G Q+H  ++  G   S+   +  S++ 
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS--VENSIMT 361

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG L  +  +F  + ++ ++SWS++I GY+Q  +++EA EL   +R    +   F 
Sbjct: 362 MYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFA 421

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           L+S++    + A++E GKQ+HAY   +       V +++++MY KCG I+EA+ +F+   
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             ++V+WT +I GY +HG ++E + LF K+    + PD V ++ VLSACSH+GLV+    
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFR 541

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF+ +    ++ P  EHY C++D L RAGRL +A+++IE+MP      +W TLL ACRVH
Sbjct: 542 YFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
           GD+E GR   E +L+L+ +    ++ ++NI+A  G W E   +RKL +SKG+ K  G SW
Sbjct: 602 GDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSW 661

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK-----EELGFV-YGVKY 605
           ++V   +  F  GD +HP  E I+ +L  +  R +     +E GF+ Y ++Y
Sbjct: 662 IKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLEY 713



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 252/475 (53%), Gaps = 16/475 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL  +N  +    K G +  A  +FDKM +++ +SWT L+ G++   ++   L LF  M 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 106 -SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             S ++ + F LS   KA G+ S V  G  +HG  +K+G   +  VG++++DMY+K G+I
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            E  R+F  MP +++++W A+I G V AGY+ + L+ F +M       D +TF   LKAC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++  G +IH   +  GF   V + +A +L   Y KCG L     +F+ +  + V+S
Sbjct: 228 ADSGALNYGREIHAQAMKKGF--DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I    Q      A++ F ++RE  +  + +  ++++   A+ A +E G+Q+HA   
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
            +      SV NSI+ MY KCG +  ++ +F+EM  +++V+W+ II GY + G   EA  
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFE 405

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           L   M ++  +P   A  +VLSAC +  ++E  ++  + +     +   +EH + ++ +L
Sbjct: 406 LLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV-----LSIGLEHTAMVLSAL 460

Query: 465 ----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
                + G ++EA  + ++      I  W  +++    HG     REV ++  ++
Sbjct: 461 INMYCKCGSIEEASRIFDAAE-NDDIVSWTAMINGYAEHG---YSREVIDLFEKI 511



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 202/385 (52%), Gaps = 4/385 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +L+ C+ +  L+YG ++H   +K GF     + N L  MY KCG++     +F+KM 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSWT ++   +Q G  +  +  F +M  S V PNE+T +  I     L+ +E G Q
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + +  G   +  V NSI+ MY+KCG++  ++ +F  M  + +++W+ +IAGY   G+
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGH 399

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             +   L   M+  G  P EF   S L ACG++  +  G Q+H ++++ G  ++   ++ 
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT--AMVL 457

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L++ Y KCG + EA R+FD  E   ++SW+++I GYA+     E ++LF ++    L+
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517

Query: 315 VDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            D      ++   +   LV+ G +  +A + K            ++D+  + G + +A  
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577

Query: 374 LFNEMPV-KNVVTWTVIITGYGKHG 397
           +   MP  ++ V W+ ++     HG
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHG 602



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C    +L++G QLH  ++ +G     M+ + LI+MY KCG +  A  +FD   
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VSWTA++ G+ ++G ++  + LF ++    ++P+  T    + A      V+ G +
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFR 541

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
                M   ++ +P   +   +ID+  + GR+++A  M + MP  +  + W+ ++    +
Sbjct: 542 YFN-AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 192 AGYSDKG 198
            G  ++G
Sbjct: 601 HGDVERG 607



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
           S  D   SN  +   +K G +  A  +F++M  K+ ++WT +I+GY     + EA+ LF+
Sbjct: 45  SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIVDS 463
            M ++     G+     + + +H      S   +  L +   +K  + +     S ++D 
Sbjct: 105 NMRVE----SGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDM 160

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             + G++ E + +   MP++ ++  W  +++
Sbjct: 161 YTKNGKIFEGRRVFHEMPMR-NVVSWTAIIT 190


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/647 (36%), Positives = 366/647 (56%), Gaps = 28/647 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI  + K G ++ A  VFD M +RNVVSWT+++ G+++NG+      LF  M      
Sbjct: 90  NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM------ 143

Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P++  +S  +   G+L    V++  ++  M      E + V   ++I  Y + GR++EA 
Sbjct: 144 PHKNVVSWTVMLGGLLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRLDEAR 199

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD MP ++++TW AM++GY   G  D    LF  M E  E+    ++T+ L     LG
Sbjct: 200 ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEV----SWTAML-----LG 250

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
               G       +    P     V+   ++  +   G + +ARRVF  ++++   +WS++
Sbjct: 251 YTHSGRMREASSLFDAMPVK-PVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAM 309

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I  Y ++    EA+ LFR+++   L ++   L S++ V    A ++ GKQ+HA   +   
Sbjct: 310 IKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEF 369

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             D  V++ ++ MY+KCG +  A ++FN  P+K+VV W  +ITGY +HGL +EA+ +F  
Sbjct: 370 DQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHD 429

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M    V PD V ++ VLSACS+SG V+E  E F  +    +++P IEHY+C+VD LGRA 
Sbjct: 430 MCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRAD 489

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           +++EA  L+E MP++P   +W  LL ACR H  L+L     E L +L+  N   YV++SN
Sbjct: 490 QVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSN 549

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT-HPLTEKIHQVLM 587
           ++A  G W + E LR+  +++ + K+ G SW+EV+K++H F GGD   HP    I ++L 
Sbjct: 550 MYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLE 609

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           ++   ++E  G+     + LHD+ EE K  SL  HSEKLA+   L    L    G  IRV
Sbjct: 610 KLGGLLREA-GYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGL----LKVPEGMPIRV 664

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLRVCGDCH  IK ++K+     ++RDA RFH F+ G CSC DYW
Sbjct: 665 MKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 178/396 (44%), Gaps = 61/396 (15%)

Query: 45  FDLMLNNDLIDM------YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACL 98
           FD+M   D++ +      Y + G ++ A A+FD+M +RNVV+WTA++ G+ +NG      
Sbjct: 171 FDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVAR 230

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP-VVGNSIIDM 157
            LF  M       NE + +  +     L    +G       +       P VV N +I  
Sbjct: 231 KLFEVMPER----NEVSWTAML-----LGYTHSGRMREASSLFDAMPVKPVVVCNEMIMG 281

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           +   G +++A R+F  M  +   TW+AMI  Y   GY  + L LFR+MQ  G   +  + 
Sbjct: 282 FGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSL 341

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S L  C SL S+  G Q+H  L+ S F   +   +A  L+  YVKCG LV A++VF+  
Sbjct: 342 ISVLSVCVSLASLDHGKQVHAQLVRSEFDQDL--YVASVLITMYVKCGNLVRAKQVFNRF 399

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K V+ W+S+I GY+Q     EA+ +F  +    +  D     + +GV +         
Sbjct: 400 PLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDV---TFIGVLSAC------- 449

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-----WTVIITG 392
              +Y+ KV  GL                      ELF  M  K  V      +  ++  
Sbjct: 450 ---SYSGKVKEGL----------------------ELFETMKCKYQVEPGIEHYACLVDL 484

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            G+     EA+ L  KM +   EPD + + A+L AC
Sbjct: 485 LGRADQVNEAMKLVEKMPM---EPDAIVWGALLGAC 517



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 60/328 (18%)

Query: 155 IDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           I  Y++ G+++ A ++FD   +P +++ +WNAM+A Y  A    + LLLF KM +     
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR---- 84

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
                                                 TV    L+  ++K G L EARR
Sbjct: 85  -------------------------------------NTVSWNGLISGHIKNGMLSEARR 107

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +  ++V+SW+S++ GY +  ++AEA  LF  +  +++       + M+G       
Sbjct: 108 VFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNV----VSWTVMLGGLLQEGR 163

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           V+  +++      +P     +V+N ++  Y + G +DEA  LF+EMP +NVVTWT +++G
Sbjct: 164 VDDARKLFDM---MPEKDVVAVTN-MIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSG 219

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y ++G    A  LF  M     E + V++ A+L   +HSG + E+   F  +     +KP
Sbjct: 220 YARNGKVDVARKLFEVM----PERNEVSWTAMLLGYTHSGRMREASSLFDAM----PVKP 271

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESM 480
            +     I+   G  G +D+A+ + + M
Sbjct: 272 VVVCNEMIM-GFGLNGEVDKARRVFKGM 298



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 204/457 (44%), Gaps = 66/457 (14%)

Query: 54  IDMYAKCGEMNGACAVFDK--MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
           I  YA+ G+++ A  VFD+  +  R V SW A++  + +    +  L LF +M      P
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM------P 82

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
              T+S                            WN ++   I     K G ++EA R+F
Sbjct: 83  QRNTVS----------------------------WNGLISGHI-----KNGMLSEARRVF 109

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D MP +++++W +M+ GYV  G   +   LF  M     +    ++T  L      G V 
Sbjct: 110 DTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV----SWTVMLGGLLQEGRVD 165

Query: 232 GGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
              ++   +         K V+A  +++  Y + G L EAR +FD + +++V++W++++ 
Sbjct: 166 DARKLFDMMPE-------KDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVS 218

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYA+   +  A +LF  + ER+ +V    +  ++G      + E      A   K     
Sbjct: 219 GYARNGKVDVARKLFEVMPERN-EVSWTAM--LLGYTHSGRMREASSLFDAMPVK----- 270

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
              V N ++  +   G +D+A  +F  M  ++  TW+ +I  Y + G   EA+GLFR+M 
Sbjct: 271 PVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQ 330

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
            + +  +  + ++VLS C     ++  ++  ++L   +     +   S ++    + G L
Sbjct: 331 REGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSE-FDQDLYVASVLITMYVKCGNL 389

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             AK +    P+K  + +W ++++    HG   LG E
Sbjct: 390 VRAKQVFNRFPLK-DVVMWNSMITGYSQHG---LGEE 422



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C     LD+G Q+H  LV+  F  DL + + LI MY KCG +  A  VF++  
Sbjct: 341 LISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP 400

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV W +++ G+ Q+G  +  L++F  M SS V P++ T    + A      V+ G++
Sbjct: 401 LKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLE 460

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           +    MK  ++  P + +   ++D+  +  ++NEA ++ + MP +   I W A++  
Sbjct: 461 LFE-TMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 17/189 (8%)

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N++V  Y +     EA  LF +MP +N V+W  +I+G+ K+G+  EA  +F      D  
Sbjct: 59  NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVF------DTM 112

Query: 416 PDG--VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           PD   V++ +++     +G V E++  F  + +       +  ++ ++  L + GR+D+A
Sbjct: 113 PDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKN-----VVSWTVMLGGLLQEGRVDDA 167

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
           + L + MP K  +A+   +   C   G L+  R + +    +   N V +  M + +A  
Sbjct: 168 RKLFDMMPEKDVVAVTNMIGGYCE-EGRLDEARALFD---EMPKRNVVTWTAMVSGYARN 223

Query: 534 GSWNECERL 542
           G  +   +L
Sbjct: 224 GKVDVARKL 232


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/559 (38%), Positives = 329/559 (58%), Gaps = 7/559 (1%)

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG  ++   E +  + N +I+ YSKCG +  A ++FD M  +SL++WN MI  Y      
Sbjct: 84  HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + L +F +M+  G    EFT +S L ACG         ++H   + +    ++   +  
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL--YVGT 201

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KCG + +A +VF+ ++ KS ++WSS++ GY Q +N  EA+ L+R+ +  SL+ 
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           + F LSS++   ++ A + +GKQ+HA   K   G +  V++S VDMY KCG + E+  +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +E+  KN+  W  II+G+ KH   KE + LF KM  D + P+ V + ++LS C H+GLVE
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E + +F  +     + P + HYSC+VD LGRAG L EA  LI+S+P  P+ +IW +LL++
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CRV+ +LEL     E L  L+ +N  N+V++SNI+A    W E  + RKL R   +KKV 
Sbjct: 442 CRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVR 501

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G+SW+++  ++H F  G+  HP   +I   L  +  + + + G+   V++ LHD++   K
Sbjct: 502 GKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR-KFGYKPSVEHELHDVEIGKK 560

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           EE L  HSEK    LALV G +       +R+ KNLR+C DCHEF+K  S   +   +VR
Sbjct: 561 EELLMQHSEK----LALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVR 616

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F  G CSCGD+W
Sbjct: 617 DVNRFHHFSDGHCSCGDFW 635



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 211/372 (56%), Gaps = 5/372 (1%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S R  + + L+ C++N  +      HG ++++    D+ L N LI+ Y+KCG +  A  V
Sbjct: 59  SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           FD MLER++VSW  ++  + +N      L +F +M +   K +EFT+S+ + A GV    
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
               ++H + +K+  + N  VG +++D+Y+KCG I +A ++F+ M  KS +TW++M+AGY
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
           V     ++ LLL+R+ Q      ++FT +S + AC +L ++  G Q+H  +  SGF  +V
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              +A S VD Y KCG L E+  +F  +++K++  W+++I G+A+     E M LF +++
Sbjct: 299 --FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGL 367
           +  +  +    SS++ V     LVE+G++      +   GL  +V +   +VD+  + GL
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGL 415

Query: 368 IDEATELFNEMP 379
           + EA EL   +P
Sbjct: 416 LSEAYELIKSIP 427



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL   +  L+  +  CS    L  G Q+H  + K GF  ++ + +  +DMYAKCG +  +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +F ++ E+N+  W  ++ GF ++   K  + LF +M    + PNE T S+ +   G  
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377

Query: 127 SSVENGMQIHGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNA 184
             VE G +   +   + G   N V  + ++D+  + G ++EA  +   +P     + W +
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437

Query: 185 MIAG 188
           ++A 
Sbjct: 438 LLAS 441



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 20/251 (7%)

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
           P   +  I G  V+F ++C  L        L    SV++       Y QEE         
Sbjct: 4   PSLPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLA------SYDQEE--VSPGRYS 55

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            +   R+L      +  ++ + A    V + K  H    ++    D ++ N +++ Y KC
Sbjct: 56  NEFSNRNL------VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC 109

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ A ++F+ M  +++V+W  +I  Y ++ +  EA+ +F +M  +  +       +VL
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 169

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVK 483
           SAC   G+  ++ E     C   +    +  Y  + ++D   + G + +A  + ESM  K
Sbjct: 170 SAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226

Query: 484 PSIAIWQTLLS 494
            S+  W ++++
Sbjct: 227 SSVT-WSSMVA 236


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/638 (35%), Positives = 350/638 (54%), Gaps = 31/638 (4%)

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE---FTLSTNIKASGVLSSVENGMQIH 136
           SW   +      G     +SLF QM  +SV P      +L   +K+   L        +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKC---------------GRINEAA-----RMFDVMPA 176
            + ++SG   +    N+++++  K                G +  AA     ++FD M  
Sbjct: 73  ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +  ++WN +I G        + L + R+M   G +PD FT ++ L        +  G  +
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           HG+ I +GF   V   +  SL+D Y  C  +  + +VFD       + W+S++ GYAQ  
Sbjct: 193 HGYAIKNGFDNDV--FVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNG 250

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
           ++ EA+ +FR++ +  ++      SS++  F + +L+  GKQ+HAY  +     +  +S+
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISS 310

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           S++DMY KCG +D A  +FN +   ++V+WT +I GY  HG   EA  LF +M L +V+P
Sbjct: 311 SLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKP 370

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + + +LAVL+ACSH+GLV+   +YF+ + N     P +EH + + D+LGRAG LDEA N 
Sbjct: 371 NHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNF 430

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I  M +KP+ ++W TLL ACRVH +  L  EV + +  L+  +  ++V++SN+++ +G W
Sbjct: 431 ISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRW 490

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           NE  +LRK  R KG+KK    SW+EV  ++H F   D +HP  ++I   L    ++M  +
Sbjct: 491 NEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQ 550

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
            G+V  ++  L DI+EE K E L  HSEKLAI    V G ++  PG  IRV KNLRVC D
Sbjct: 551 -GYVPNMEDVLQDIEEEQKREVLCGHSEKLAI----VFGIISTPPGTTIRVMKNLRVCVD 605

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           CH   K +SKI+    VVRD  RFHRF+ G CSCGD+W
Sbjct: 606 CHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 220/436 (50%), Gaps = 30/436 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-------------- 60
           L  +L+ C+   L      LH   ++ G   D    N L+++  K               
Sbjct: 52  LPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSG 111

Query: 61  -GEMNGAC-----AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEF 114
            G +  A       VFD+MLER+ VSW  L+ G  ++   +  LS+  +M      P+ F
Sbjct: 112 EGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTF 171

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           TLST +      + ++ GM +HG  +K+GF+ +  VG+S+IDMY+ C +++ + ++FD  
Sbjct: 172 TLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSF 231

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
                + WN+M+AGY   G  ++ L +FR+M + G  P   TF+S + A G+L  +  G 
Sbjct: 232 SDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGK 291

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+H +LI + F  ++   I+ SL+D Y KCG +  ARRVF+ I+   ++SW+++I+GYA 
Sbjct: 292 QLHAYLIRARFNDNI--FISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTS 353
                EA  LF ++   +++ +     +++   +   LV+ G K  ++ + +   G   S
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQY--GFVPS 407

Query: 354 VSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKML 410
           + +  ++ D   + G +DEA    +EM +K   + W+ ++     H     A  + +K+ 
Sbjct: 408 LEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF 467

Query: 411 LDDVEPDGVAYLAVLS 426
             ++EP  +    +LS
Sbjct: 468 --ELEPKSMGSHVILS 481


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/610 (35%), Positives = 351/610 (57%), Gaps = 38/610 (6%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            S  ++A   L SV  G Q+H +   SG   +  + N ++++YSK G +  A  +FD MP
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 176 AKSLI-------------------------------TWNAMIAGYVLAGYSDKGLLLFRK 204
            ++++                               TWNAM+ G      +++ LLLF +
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M E   +PDE++  S L+ C  LG++  G Q+H +++  GF  ++  V+  SL   Y+K 
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNL--VVGCSLAHMYMKA 249

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G + +  RV + +   S+++W++L+ G AQ+      ++ +  ++    + D     S++
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              ++ A++ QGKQIHA A K  +  + SV +S+V MY +CG + ++ + F E   ++VV
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVV 369

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
            W+ +I  YG HG  +EA+ LF +M  +++  + + +L++L ACSH GL ++    F  +
Sbjct: 370 LWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMM 429

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                +K R++HY+C+VD LGR+G L+EA+ +I SMPVK    IW+TLLSAC++H + E+
Sbjct: 430 VKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEI 489

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
            R V + +LR+D  +  +YV+++NI++ A  W     +R+  + K +KK  G SWVEV  
Sbjct: 490 ARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKN 549

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
           ++H F+ GD+ HP   +I+Q L E+   +K + G+V      LHD+  E KE+ LR HSE
Sbjct: 550 QVHQFHMGDECHPKHVEINQYLEELTSEIKRQ-GYVPDTSSVLHDMDNEEKEQILRHHSE 608

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLAI  AL    +N   G  IRV KNLRVC DCH  IK +S+I KL  +VRD++RFH F+
Sbjct: 609 KLAIAFAL----MNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFK 664

Query: 685 GGVCSCGDYW 694
            G CSCGDYW
Sbjct: 665 NGTCSCGDYW 674



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 228/476 (47%), Gaps = 39/476 (8%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           +E +  ++ L+ C     +  G QLH  +   G S D  ++N L+++Y+K GE+  A A+
Sbjct: 67  AEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVAL 126

Query: 70  FDKML-------------------------------ERNVVSWTALMCGFLQNGNAKACL 98
           FD+M                                +RNV +W A++ G  +    +  L
Sbjct: 127 FDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEAL 186

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
            LF +M   S  P+E++L + ++    L ++  G Q+H   MK GFE N VVG S+  MY
Sbjct: 187 LLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMY 246

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
            K G +++  R+ + MP  SL+ WN +++G    GY +  L  +  M+  G  PD+ TF 
Sbjct: 247 MKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFV 306

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           S + +C  L  +  G QIH   + +G   S +  +  SLV  Y +CGCL ++ + F   +
Sbjct: 307 SVISSCSELAILCQGKQIHAEAVKAG--ASSEVSVVSSLVSMYSRCGCLQDSIKTFLECK 364

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           ++ V+ WSS+I  Y       EA++LF ++ + +L  +     S++   +   L ++G  
Sbjct: 365 ERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLG 424

Query: 339 IHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGK 395
           +     K   GL   + +   +VD+  + G ++EA  +   MPVK + + W  +++    
Sbjct: 425 LFDMMVK-KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKI 483

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           H  A+ A  +  ++L  D + D  +Y+ + +  S +   +   E   R   DK +K
Sbjct: 484 HKNAEIARRVADEVLRIDPQ-DSASYVLLANIYSSANRWQNVSE-VRRAMKDKMVK 537



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 155/319 (48%), Gaps = 12/319 (3%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MN +SF  + +   L   LR C+    L  G Q+H  ++K GF  +L++   L  MY K 
Sbjct: 192 MNELSF--MPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA 249

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M+    V + M + ++V+W  LM G  Q G  +  L  +C M  +  +P++ T  + I
Sbjct: 250 GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            +   L+ +  G QIH   +K+G      V +S++ MYS+CG + ++ + F     + ++
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVV 369

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            W++MIA Y   G  ++ + LF +M++     +E TF S L AC   G    G  +   +
Sbjct: 370 LWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMM 429

Query: 241 ITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEEN 297
           +     Y +K  +     LVD   + GCL EA  +   +  K+  I W +L+      +N
Sbjct: 430 VKK---YGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKN 486

Query: 298 LAEAMELFRQLRERSLQVD 316
                E+ R++ +  L++D
Sbjct: 487 ----AEIARRVADEVLRID 501


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/607 (34%), Positives = 354/607 (58%), Gaps = 4/607 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A   R C+       G QLHG  +K  F++D ++    +DMYAKC  M  A  VF+ +  
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPN 302

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
               S+ A++ G+ +       L +F  +  +++  +E +LS  + A  V+     G+Q+
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +K G  +N  V N+I+DMY KCG + EA  +F+ M  +  ++WNA+IA +      
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L LF  M      PD+FT+ S +KAC    ++  GT+IHG +I SG    +   +  
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGM--GLDWFVGS 480

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LVD Y KCG L+EA ++   +E+K+ +SW+S+I G++ ++    A   F Q+ E  +  
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D +  ++++ V A+ A +E GKQIHA   K+    D  +++++VDMY KCG + ++  +F
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + P ++ VTW+ +I  Y  HGL ++A+ LF +M L +V+P+   +++VL AC+H G V+
Sbjct: 601 EKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF ++ +   + P++EHYSC+VD LGR+G+++EA  LIESMP +    IW+TLLS 
Sbjct: 661 KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++ G++E+  +    LL+LD  +   YV+++N++A  G W E  ++R + ++  LKK  
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEP 780

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEES 614
           G SW+EV  E+H F  GD  HP +E+I++    +   MK   G+V  + + L  +++E+ 
Sbjct: 781 GCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWA-GYVPDIDFMLDEEMEEQD 839

Query: 615 KEESLRV 621
             E L+ 
Sbjct: 840 PYEGLKT 846



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 266/498 (53%), Gaps = 8/498 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGV--QLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           S  +  +    A  L+ CS   + DYG+  Q+H   ++MGF  D++  + L+DMY+KC +
Sbjct: 131 SLKIPHDYATFAVILKACSG--IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           ++ A  VF +M ERN+V W+A++ G++QN      L LF  M    +  ++ T ++  ++
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              LS+ + G Q+HG  +KS F ++ ++G + +DMY+KC R+ +A ++F+ +P     ++
Sbjct: 249 CAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           NA+I GY       K L +F+ +Q +    DE + +  L AC  +     G Q+HG  + 
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVK 368

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            G  +++   +A +++D Y KCG L+EA  +F+ +E++  +SW+++I  + Q E + + +
Sbjct: 369 CGLGFNI--CVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            LF  +   +++ D F   S++   A    +  G +IH    K   GLD  V +++VDMY
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMY 486

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG++ EA ++   +  K  V+W  II+G+     ++ A   F +ML   + PD   Y 
Sbjct: 487 GKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYA 546

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
            VL  C++   +E  ++  +++    ++   +   S +VD   + G + +++ + E  P 
Sbjct: 547 TVLDVCANMATIELGKQIHAQILK-LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP- 604

Query: 483 KPSIAIWQTLLSACRVHG 500
           K     W  ++ A   HG
Sbjct: 605 KRDYVTWSAMICAYAYHG 622



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 265/502 (52%), Gaps = 14/502 (2%)

Query: 32  VQLHGALVKMGFSF---------DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +Q +    KM ++F         D++  N LI  YA  G M  A ++FD M ER+VVSW 
Sbjct: 48  LQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWN 107

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           +L+  +L NG  +  + +F +M S  +  +  T +  +KA   +     G+Q+H + ++ 
Sbjct: 108 SLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQM 167

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           GFE + V G++++DMYSKC ++++A R+F  MP ++L+ W+A+IAGYV      +GL LF
Sbjct: 168 GFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           + M + G    + T+ S  ++C  L +   GTQ+HG  + S F Y   ++I  + +D Y 
Sbjct: 228 KDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD--SIIGTATLDMYA 285

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           KC  + +A +VF+ +      S++++I+GYA+++   +A+++F+ L+  +L  D   LS 
Sbjct: 286 KCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSG 345

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
            +   +      +G Q+H  A K   G +  V+N+I+DMY KCG + EA  +F EM  ++
Sbjct: 346 ALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRD 405

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V+W  II  + ++    + + LF  ML   +EPD   Y +V+ AC+    +    E   
Sbjct: 406 AVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHG 465

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           R+     M       S +VD  G+ G L EA+ +   +  K +++ W +++S        
Sbjct: 466 RIIKSG-MGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVS-WNSIISGFSSQKQS 523

Query: 503 ELGREVGEILLRLDGDNPVNYV 524
           E  +     +L + G  P NY 
Sbjct: 524 ENAQRYFSQMLEM-GIIPDNYT 544



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 193/416 (46%), Gaps = 39/416 (9%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           + T S  ++    L ++  G Q+H   + +GF     V N ++  Y K  ++N A ++FD
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG----------------------- 209
            MP + +I+WN +I GY   G       LF  M E                         
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 210 -------EIPDEF-TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
                  +IP ++ TF   LKAC  +   G G Q+H   I  GF   V  V   +LVD Y
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDV--VTGSALVDMY 183

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KC  L +A RVF  + +++++ WS++I GY Q +   E ++LF+ + +  + V     +
Sbjct: 184 SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           S+    A  +  + G Q+H +A K     D+ +  + +DMY KC  + +A ++FN +P  
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE-- 439
              ++  II GY +     +A+ +F+ +  +++  D ++    L+ACS   +++   E  
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS---VIKRHLEGI 360

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
               L     +   I   + I+D  G+ G L EA  + E M  + +++ W  +++A
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVS-WNAIIAA 415



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 104/189 (55%), Gaps = 4/189 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++ +    A  L  C+    ++ G Q+H  ++K+    D+ + + L+DMY+KCG M  + 
Sbjct: 538 IIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+K  +R+ V+W+A++C +  +G  +  ++LF +M   +VKPN     + ++A   + 
Sbjct: 598 LMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMG 657

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
            V+ G+  +   M S +  +P + +   ++D+  + G++NEA ++ + MP ++  + W  
Sbjct: 658 YVDKGLH-YFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRT 716

Query: 185 MIAGYVLAG 193
           +++   + G
Sbjct: 717 LLSNCKMQG 725


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/586 (35%), Positives = 336/586 (57%), Gaps = 9/586 (1%)

Query: 110 KPNEFTLSTNIKASGVLSSVEN-GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           +P      T++  S + S   N G Q+H      G  +N  +   ++ +Y+    +  A 
Sbjct: 43  QPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNAR 102

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD +P ++L  WN +I GY   G  D  ++L+ KM ++G  PD FT    LKAC +L 
Sbjct: 103 NLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALS 162

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           ++G G  IH ++I SG+   +   +  +L+D Y KCGC+++A RVFD I  +  + W+S+
Sbjct: 163 AIGEGRSIHEYVIKSGWERDL--FVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           +  YAQ  +  E++ L R++    ++     L +++   AD A +  G++IH +  +   
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             +  V  +++DMY KCG +  A  LF  +  K VV+W  IITGY  HGLA  A+ LF K
Sbjct: 281 QSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDK 340

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M  +D  PD + ++ VL+ACS   L++E +  ++ +  D  + P ++HY+C++D LG  G
Sbjct: 341 MRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCG 399

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           +LDEA +LI +M VKP   +W  LL++C++HG++EL     E L+ L+ D+  NYV+++N
Sbjct: 400 QLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILAN 459

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           ++A +G W   E+LR++   K +KK    SW+EV  +++ F  GD +H  ++ I+  L  
Sbjct: 460 MYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKR 519

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +E  M  E G+        HD++E+ K   +  HSE+LAI   L+    +  PG  + + 
Sbjct: 520 LEGLM-HEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLI----STSPGTRLLIT 574

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLR+C DCH  IK +SKI++    VRD  R+H F+ G+CSCGD+W
Sbjct: 575 KNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 226/439 (51%), Gaps = 9/439 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  +  L+ G QLH     +G +++  L   L+ +YA    +  A  +FDK+ ++N+
Sbjct: 54  LQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNL 113

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  L+ G+  NG     + L+ +M    ++P+ FTL   +KA   LS++  G  IH  
Sbjct: 114 FLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEY 173

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KSG+E +  VG ++IDMY+KCG + +A R+FD +  +  + WN+M+A Y   G+ D+ 
Sbjct: 174 VIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L R+M  +G  P E T  + + +   +  +  G +IHGF    GF  + K  +  +L+
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDK--VKTALI 291

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A  +F+ + +K V+SW+++I GYA       A++LF ++R+   + D  
Sbjct: 292 DMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHI 350

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   +   L+++G+ ++    +   G+  +V +   ++D+   CG +DEA +L  
Sbjct: 351 TFVGVLAACSRGRLLDEGRALYNLMVR-DYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            M VK +   W  ++     HG  + A     K++  ++EPD      +L+         
Sbjct: 410 NMSVKPDSGVWGALLNSCKIHGNVELAELALEKLI--ELEPDDSGNYVILANMYAQSGKW 467

Query: 436 ESQEYFSRLCNDKRMKPRI 454
           E  E   ++  DKR+K  I
Sbjct: 468 EGVEKLRQVMIDKRIKKNI 486


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 236/687 (34%), Positives = 365/687 (53%), Gaps = 53/687 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDL-MLNNDLIDMYAKCGEMNGACAVFDKMLER- 76
           L+CC+    L     +H +L   GF          LI +Y+K G+++ A  +FD      
Sbjct: 32  LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88

Query: 77  -------NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
                  N      ++  +   G +   + L+  M    V  N FT    +K        
Sbjct: 89  HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G  +HG  +++GF  +  V  +++DMY+KCG I +A  +FD M  + ++ W AMI  Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             A    K L+LFRKMQE G + DE T  S   A G LG         G +  S      
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD--------GRMAIS------ 254

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
                               AR VFD +E+++ ISW+S++ GY Q     +A+ LF Q++
Sbjct: 255 -------------------RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 295

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
                 +      M+   +       G+++H +       +DT++ N+I+DMY+KCG +D
Sbjct: 296 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLD 355

Query: 370 EATELFN--EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            A E+FN  E+  ++V +W V+I+GYG HG  KEA+ LF +M ++ VEP+ + + ++LSA
Sbjct: 356 TAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 415

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GL++E ++ F+ +     ++P ++HY+C+VD LGRAG L+EA  LI+ +P +PS  
Sbjct: 416 CSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDE 474

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL ACR+HG+ ELG      L +L+ ++   YV+MSNI+A +  W E E +R+  +
Sbjct: 475 VWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMK 534

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
           S+GLKK A  S +E   E+H F+  D + P   ++++ +  +   MK  +G+V  +   L
Sbjct: 535 SRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK-MVGYVPDLSCVL 593

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD++ E KE  L  HSEKLA+   +++       G  I+V KNLRVC DCH   K +S I
Sbjct: 594 HDVEPEDKEHLLNYHSEKLAVAFGIMK----MDQGMPIQVTKNLRVCSDCHWAFKFISSI 649

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD  RFH F+GG CSCGDYW
Sbjct: 650 YGRKIIVRDGNRFHHFQGGRCSCGDYW 676


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/569 (36%), Positives = 339/569 (59%), Gaps = 8/569 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +SV     IH   +KS    +  +G+ ++ MY K G   +A R+FD MP K L++WN+++
Sbjct: 76  TSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLM 135

Query: 187 AGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +G    GY    L  F +M+ E G  P+E T  S + AC  +G++  G  +HG ++  G 
Sbjct: 136 SGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGM 195

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S K  +  SL++ Y K G L  A ++F+ +  +S++SW+S+++ +       + M+LF
Sbjct: 196 --SGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 253

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             ++   +  D   + +++    D  L  Q + IHAY  +     D  ++ +++++Y K 
Sbjct: 254 NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 313

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ + ++F E+  ++ + WT ++ GY  H   +EA+ LF  M+ + VE D V +  +L
Sbjct: 314 GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 373

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACSHSGLVEE ++YF  +    R++PR++HYSC+VD LGR+GRL++A  LI+SMP++PS
Sbjct: 374 SACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPS 433

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             +W  LL ACRV+G++ELG+EV E LL LD  +  NY+M+SNI++ AG W +  ++R L
Sbjct: 434 SGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRAL 493

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            + + L +  G S++E   +IH F  GD  HP +++IH  L E+ ++++E  G     ++
Sbjct: 494 MKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREA-GCAPKTEF 552

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHDI EE K + +  HSEKLAI   L+  G     G  + + KNLR+CGDCH   K  S
Sbjct: 553 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTG----SGVPLIITKNLRICGDCHSTAKFAS 608

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + K   ++RD+ RFH F  G+CSC DYW
Sbjct: 609 LLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 231/442 (52%), Gaps = 19/442 (4%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F + S  Q L  ++  C+    + Y   +H  ++K     D  + + L+ MY K G    
Sbjct: 59  FQVYSIVQSLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDED 115

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASG 124
           A  +FD+M  +++VSW +LM G    G   ACL+ FC+M + S  +PNE TL + + A  
Sbjct: 116 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 175

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            + +++ G  +HG+ +K G      V NS+I+MY K G ++ A+++F+ MP +SL++WN+
Sbjct: 176 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 235

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           M+  +   GY++KG+ LF  M+  G  PD+ T  + L+AC   G       IH ++   G
Sbjct: 236 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 295

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F  +   +IA +L++ Y K G L  +  +F+ I+ +  I+W++++ GYA      EA++L
Sbjct: 296 F--NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 353

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDM 361
           F  + +  ++VD    + ++   +   LVE+GK   +I +   +V   LD    + +VD+
Sbjct: 354 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMVDL 411

Query: 362 YLKCGLIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVEPD 417
             + G +++A EL   MP++ +   W  ++     YG   L KE      + LL     D
Sbjct: 412 LGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA----EQLLSLDPSD 467

Query: 418 GVAYLAVLSACSHSGLVEESQE 439
              Y+ + +  S +GL  ++ +
Sbjct: 468 HRNYIMLSNIYSAAGLWRDASK 489


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/546 (38%), Positives = 327/546 (59%), Gaps = 13/546 (2%)

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA-GYSDKGLLLFRKMQEH 208
           V NS+  MY+K G +++A RMFD MP ++++TW  ++A    A G   + L     M+  
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ +TF+S L AC + G +   T +H   + +G    V   +  SL+D YVK G L 
Sbjct: 166 GVAPNAYTFSSVLGACTTPGML---TAVHASTVKAGLDSDV--FVRSSLIDAYVKLGDLD 220

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
             RRVFD +  + ++ W+S+I G+AQ  +   A+ELF ++++     +   L+S++    
Sbjct: 221 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACT 280

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              ++E G+Q+HA+  K     D  + N+++DMY KCG +++A  LF+ MP ++V++W+ 
Sbjct: 281 GMVMLEAGRQVHAHVLKYDR--DLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWST 338

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +++G  ++G + EA+ +F  M    V P+ V  + VL ACSH+GLVE+   YF  +    
Sbjct: 339 MVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLF 398

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P  EH++C+VD LGRAG+LDEA   I  M ++P   IW+TLL ACR+H +  L    
Sbjct: 399 GIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYA 458

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
              +L+L+ D+    V++SN +AD   W + E+  K  R +G++K  GRSW+E++K +H 
Sbjct: 459 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHV 518

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +HP ++ I Q L  +  R+K  LG+V   ++ L D+  E KE+ L+ HSEK+AI
Sbjct: 519 FIAGDLSHPCSDTIIQELNRLIGRIK-SLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAI 577

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
               V G ++   GK IR+ KNLR+CGDCH F K +SK    V V+RD  RFH F+ G C
Sbjct: 578 ----VFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGAC 633

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 634 SCGDYW 639



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 211/421 (50%), Gaps = 27/421 (6%)

Query: 19  LRCCSKNLLLDYG------VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           ++ C ++   D+G      V+ HG L   G +  L ++N L  MYAK G ++ A  +FD 
Sbjct: 71  VKLCVRHGTADHGRLIHRHVEAHGPLPHDG-AGGLFVSNSLASMYAKFGLLDDALRMFDG 129

Query: 73  MLERNVVSWTALMCGFLQ-NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSS 128
           M  RNVV+WT ++      +G  +  L     M    V PN +T S+ + A    G+L++
Sbjct: 130 MPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA 189

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V      H   +K+G + +  V +S+ID Y K G ++   R+FD M  + L+ WN++IAG
Sbjct: 190 V------HASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAG 243

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +  +G     + LF +M++ G   ++ T TS L+AC  +  +  G Q+H  ++     Y 
Sbjct: 244 FAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK----YD 299

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
              ++  +L+D Y KCG L +A  +F  + Q+ VISWS+++ G AQ     EA+ +F  +
Sbjct: 300 RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLM 359

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCG 366
           + + +  +   +  ++   +   LVE G   +  + K   G+  +    N +VD+  + G
Sbjct: 360 KSQGVAPNHVTMVGVLFACSHAGLVEDGWH-YFRSMKRLFGIQPEREHHNCMVDLLGRAG 418

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
            +DEA E  + M ++ + V W  ++     H  A  A    R++L   +EPD      +L
Sbjct: 419 KLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREIL--KLEPDDQGARVLL 476

Query: 426 S 426
           S
Sbjct: 477 S 477



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 14/209 (6%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M    FS  S +  L   LR C+  ++L+ G Q+H  ++K  +  DL+L+N L+DMY KC
Sbjct: 260 MKDAGFS--SNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKC 315

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A A+F +M +R+V+SW+ ++ G  QNG +   L +F  M S  V PN  T+   +
Sbjct: 316 GSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVL 375

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVV--GNSIIDMYSKCGRINEAARMFDVMPAKS 178
            A      VE+G   +   MK  F   P     N ++D+  + G+++EA      M  + 
Sbjct: 376 FACSHAGLVEDGWH-YFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEP 434

Query: 179 -LITWNAMIAG------YVLAGYSDKGLL 200
             + W  ++          LA Y+ + +L
Sbjct: 435 DSVIWRTLLGACRMHKNASLAAYAAREIL 463


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/592 (35%), Positives = 338/592 (57%), Gaps = 10/592 (1%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           + +  + P      + I A     ++E+  +IH     S F  +  + NS+I MY KC  
Sbjct: 42  LDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRS 101

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A  +FD M  K +++W ++IAGY       + + L   M +    P+ FTF S LKA
Sbjct: 102 VLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
            G+    G G QIH   +  G+   V   +  +L+D Y +CG +  A  VFD ++ K+ +
Sbjct: 162 AGAYADSGTGRQIHALAVKCGWHEDV--YVGSALLDMYARCGKMDMATAVFDKLDSKNGV 219

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW++LI G+A++ +   A+  F ++     +   F  SS+    A    +EQGK +HA+ 
Sbjct: 220 SWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHV 279

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K    L   V N+++DMY K G + +A ++F+ +  K++VTW  ++T + ++GL KEAV
Sbjct: 280 IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             F +M    V  + + +L +L+ACSH GLV+E + YF  +  +  ++P I+HY  +V  
Sbjct: 340 SHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHYVTVVAL 398

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGRAG L+ A   I  MP++P+ A+W  LL+ACR+H + ++G+   + +  LD D+    
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPP 458

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           V++ NI+A  G W+   R+R + ++ G+KK    SWVE++  +H F   DDTHP  E+I+
Sbjct: 459 VLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIY 518

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP-G 642
           ++  E+ K++++E G+V  + Y L  + ++ KE +L+ HSEKLA+  AL+     E P G
Sbjct: 519 KMWGEISKKIRKE-GYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALI-----EMPAG 572

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IR+ KN+R+CGDCH   K +SK+     VVRD  RFH F  G CSCGDYW
Sbjct: 573 ATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 214/400 (53%), Gaps = 5/400 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+++  L+   ++H  L    F+ D  L+N LI MY KC  +  A  VFD+M  +++
Sbjct: 58  ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+L+ G+ QN      + L   M     KPN FT ++ +KA+G  +    G QIH +
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHAL 177

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G+  +  VG++++DMY++CG+++ A  +FD + +K+ ++WNA+I+G+   G  +  
Sbjct: 178 AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESA 237

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L+ F +M  +G     FT++S   +   LG++  G  +H  +I S     +   +  +L+
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKS--RQKLTAFVGNTLL 295

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y K G +++AR+VFD ++ K +++W+S++  +AQ     EA+  F ++R+  + ++  
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++   +   LV++GK+      +     +     ++V +  + GL++ A     +M
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKM 415

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           P++     W  ++     H  AK  VG F    + +++PD
Sbjct: 416 PMEPTAAVWGALLAACRMHKNAK--VGQFAADHVFELDPD 453


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 340/592 (57%), Gaps = 8/592 (1%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           + C  N  ++YG  LHG  VK G    + + + L+DMY K G++     VF +M  RNVV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           SWTA++ G ++ G  K  L  F +M  S V+ + +T +  +KA     ++  G +IH   
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           MK GF+ +  V N++  MY+KCG++     +F+ M  + +++W  +I   V  G  +  +
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
             F +M+E    P+E+TF + +  C +L  +  G Q+H  ++  G   S+   +  S++ 
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS--VENSIMT 361

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG L  +  +F  + ++ ++SWS++I GY Q  +++EA EL   +R    +   F 
Sbjct: 362 MYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFA 421

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           L+S++    + A++E GKQ+HAY   +       V +++++MY KCG I+EA+ +F+   
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
             ++V+WT +I GY +HG ++E + LF K+    + PD V ++ VLSACSH+GLV+    
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFH 541

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF+ +    ++ P  EHY C++D L RAGRL +A+++IE+MP      +W TLL ACRVH
Sbjct: 542 YFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
           GD+E GR   E +L+L+ +    ++ ++NI+A  G W E   +RKL +SKG+ K  G SW
Sbjct: 602 GDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSW 661

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK-----EELGFV-YGVKY 605
           ++V   +  F  GD +HP  E I+ +L  +  R +     +E GF+ Y ++Y
Sbjct: 662 IKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLEY 713



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 252/475 (53%), Gaps = 16/475 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL  +N  +    K G +  A  +FDKM +++ +SWT L+ G++   ++   L LF  M 
Sbjct: 48  DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107

Query: 106 -SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             S ++ + F LS   KA G+ S V  G  +HG  +K+G   +  VG++++DMY+K G+I
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            E  R+F  MP +++++W A+I G V AGY+ + L+ F +M       D +TF   LKAC
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKAC 227

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
              G++  G +IH   +  GF   V + +A +L   Y KCG L     +F+ +  + V+S
Sbjct: 228 ADSGALNYGREIHAQAMKKGF--DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I    Q      A++ F ++RE  +  + +  ++++   A+ A +E G+Q+HA   
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
            +      SV NSI+ MY KCG +  ++ +F+EM  +++V+W+ II GY + G   EA  
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFE 405

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           L   M ++  +P   A  +VLSAC +  ++E  ++  + +     +   +EH + ++ +L
Sbjct: 406 LLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV-----LSIGLEHTAMVLSAL 460

Query: 465 ----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
                + G ++EA  + ++      I  W  +++    HG     REV ++  ++
Sbjct: 461 INMYCKCGSIEEASRIFDAAE-NDDIVSWTAMINGYAEHG---YSREVIDLFEKI 511



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 201/385 (52%), Gaps = 4/385 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A +L+ C+ +  L+YG ++H   +K GF     + N L  MY KCG++     +F+KM 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+VVSWT ++   +Q G  +  +  F +M  S V PNE+T +  I     L+ +E G Q
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H + +  G   +  V NSI+ MY+KCG++  ++ +F  M  + +++W+ +IAGY   G+
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGH 399

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             +   L   M+  G  P EF   S L ACG++  +  G Q+H ++++ G  ++   ++ 
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT--AMVL 457

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L++ Y KCG + EA R+FD  E   ++SW+++I GYA+     E ++LF ++    L+
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517

Query: 315 VDGFVLSSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            D      ++   +   LV+ G    +A + K            ++D+  + G + +A  
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577

Query: 374 LFNEMPV-KNVVTWTVIITGYGKHG 397
           +   MP  ++ V W+ ++     HG
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHG 602



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C    +L++G QLH  ++ +G     M+ + LI+MY KCG +  A  +FD   
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VSWTA++ G+ ++G ++  + LF ++    ++P+  T    + A      V+ G  
Sbjct: 482 NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFH 541

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
                M   ++ +P   +   +ID+  + GR+++A  M + MP  +  + W+ ++    +
Sbjct: 542 YFN-AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRV 600

Query: 192 AGYSDKG 198
            G  ++G
Sbjct: 601 HGDVERG 607



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
           S  D   SN  +   +K G +  A  +F++M  K+ ++WT +I+GY     + EA+ LF+
Sbjct: 45  SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY----SCIVDS 463
            M ++     G+     + + +H      S   +  L +   +K  + +     S ++D 
Sbjct: 105 NMRVE----SGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDM 160

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
             + G++ E + +   MP++ ++  W  +++
Sbjct: 161 YTKNGKIFEGRRVFHEMPMR-NVVSWTAIIT 190


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/569 (36%), Positives = 339/569 (59%), Gaps = 8/569 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +SV     IH   +KS    +  +G+ ++ MY K G   +A R+FD MP K L++WN+++
Sbjct: 133 TSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLM 192

Query: 187 AGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +G    GY    L  F +M+ E G  P+E T  S + AC  +G++  G  +HG ++  G 
Sbjct: 193 SGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGM 252

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S K  +  SL++ Y K G L  A ++F+ +  +S++SW+S+++ +       + M+LF
Sbjct: 253 --SGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 310

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             ++   +  D   + +++    D  L  Q + IHAY  +     D  ++ +++++Y K 
Sbjct: 311 NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 370

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ + ++F E+  ++ + WT ++ GY  H   +EA+ LF  M+ + VE D V +  +L
Sbjct: 371 GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 430

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACSHSGLVEE ++YF  +    R++PR++HYSC+VD LGR+GRL++A  LI+SMP++PS
Sbjct: 431 SACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPS 490

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             +W  LL ACRV+G++ELG+EV E LL LD  +  NY+M+SNI++ AG W +  ++R L
Sbjct: 491 SGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRAL 550

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            + + L +  G S++E   +IH F  GD  HP +++IH  L E+ ++++E  G     ++
Sbjct: 551 MKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREA-GCAPKTEF 609

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHDI EE K + +  HSEKLAI   L+  G     G  + + KNLR+CGDCH   K  S
Sbjct: 610 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTG----SGVPLIITKNLRICGDCHSTAKFAS 665

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + K   ++RD+ RFH F  G+CSC DYW
Sbjct: 666 LLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 233/444 (52%), Gaps = 22/444 (4%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           V +S+V   Q L  ++  C+    + Y   +H  ++K     D  + + L+ MY K G  
Sbjct: 117 VVYSIV---QSLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYD 170

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKA 122
             A  +FD+M  +++VSW +LM G    G   ACL+ FC+M + S  +PNE TL + + A
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              + +++ G  +HG+ +K G      V NS+I+MY K G ++ A+++F+ MP +SL++W
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N+M+  +   GY++KG+ LF  M+  G  PD+ T  + L+AC   G       IH ++  
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 350

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
            GF  +   +IA +L++ Y K G L  +  +F+ I+ +  I+W++++ GYA      EA+
Sbjct: 351 CGF--NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAI 408

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIV 359
           +LF  + +  ++VD    + ++   +   LVE+GK   +I +   +V   LD    + +V
Sbjct: 409 KLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMV 466

Query: 360 DMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAVGLFRKMLLDDVE 415
           D+  + G +++A EL   MP++ +   W  ++     YG   L KE      + LL    
Sbjct: 467 DLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVA----EQLLSLDP 522

Query: 416 PDGVAYLAVLSACSHSGLVEESQE 439
            D   Y+ + +  S +GL  ++ +
Sbjct: 523 SDHRNYIMLSNIYSAAGLWRDASK 546


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/723 (31%), Positives = 371/723 (51%), Gaps = 56/723 (7%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK-CGEMNGA 66
           L+ ++   A +L        LD    L    +K GF  D+++   ++++Y++    ++ A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              F+ M+ERN  +W+ ++      G   A ++++ +    S+      L T +   G +
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQCGRI 338

Query: 127 SSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
                         +  FE  P    V  N++I  Y + G +NEA  +FD MP ++ I+W
Sbjct: 339 DDA-----------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
             MIAGY   G S++ L L +++   G +P   + TS   AC ++ ++  GTQ+H   + 
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447

Query: 243 SGFPYSVKTVIAGSLVDFYVKC-------------------------------GCLVEAR 271
            G  ++  +    +L+  Y KC                                 L EAR
Sbjct: 448 VGCQFN--SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEAR 505

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
             FD +  +  +SW+++I  YA  E   EAM  F+ +       +  +L+ ++GV     
Sbjct: 506 NTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLG 565

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             + G+QIH  A K+    +  V+N+++ MY KCG  D +  +F+ M  +++ TW  IIT
Sbjct: 566 ASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIIT 624

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY +HGL +EA+ +++ M    V P+ V ++ +L+ACSH+GLV+E  ++F  +  D  + 
Sbjct: 625 GYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLT 684

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  EHY+C+VD LGR G +  A+  I  MP++P   IW  LL AC++H + E+G+   E 
Sbjct: 685 PLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEK 744

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L R++  N  NYVM+SNI++  G W E   +RK+ + +G+ K  G SW ++  ++H F  
Sbjct: 745 LFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVT 804

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD  H   E+I   L E+   +K   G+V   ++ LHDI EE KE SL  HSEKLA+   
Sbjct: 805 GDKQHEQIEEIVATLEELYTLLKAT-GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L    L    G  I++ KNLR+CGDCH FIK +S + K    +RD  RFH F  G CSC 
Sbjct: 864 L----LATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCE 919

Query: 692 DYW 694
           D+W
Sbjct: 920 DFW 922



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 197/402 (49%), Gaps = 15/402 (3%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           S D+   N ++  Y    +M  A  +F+KM ERN+VSWT ++ G+ +  N      +FC+
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK-CG 162
           M    + P++   ++ + A   L +++    +  + +K+GFE + V+G +I+++YS+   
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            ++ A + F+ M  ++  TW+ MIA     G  D  + ++ +      I       + L 
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-DPVKSIACRTALITGLA 333

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            CG +            ++    P  +  V   +L+  Y++ G + EA+ +FD +  ++ 
Sbjct: 334 QCGRIDDAR--------ILFEQIPEPI-VVSWNALITGYMQNGMVNEAKELFDKMPFRNT 384

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ISW+ +I GYAQ     EA+ L ++L    +      L+S+    ++   +E G Q+H+ 
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A KV    ++   N+++ MY KC  ++ A ++F+ M  K++V+W   +    ++ L  EA
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
              F  ML      D V++  ++SA +H+    E+   F  +
Sbjct: 505 RNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/516 (22%), Positives = 238/516 (46%), Gaps = 63/516 (12%)

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           + G +  A  VFD M  R++++W +++  +  NG   A   L+  +   +++     LS 
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105

Query: 119 NIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
             +   VL +  V +GM           E N V  N++I  Y + G I  A R+FD MP+
Sbjct: 106 YGRLGRVLEARRVFDGM----------LERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155

Query: 177 KSLITWNAMIAGY--------------------------VLAGYSD-----KGLLLFRKM 205
           + + +WN+M+ GY                          +++GY       K   +F KM
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK-C 264
              G +PD+  F S L A   LG++     +    + +GF   V  VI  ++++ Y +  
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDV--VIGTAILNVYSRDT 273

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
             L  A + F+ + +++  +WS++I   +    +  A+ ++ +   +S+     +++ + 
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL- 332

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              A    ++  + +     ++P  +  S  N+++  Y++ G+++EA ELF++MP +N +
Sbjct: 333 ---AQCGRIDDARILF---EQIPEPIVVSW-NALITGYMQNGMVNEAKELFDKMPFRNTI 385

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +I GY ++G ++EA+GL +++    + P   +  ++  ACS+   +E   +  S  
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 445 CNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
               ++  +   ++C  ++   G+   ++ A+ +   M  K  I  W + L+A   +  L
Sbjct: 446 V---KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQNDLL 501

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           +  R   + +L  D    V++  + + +A A   NE
Sbjct: 502 DEARNTFDNMLSRD---DVSWTTIISAYAHAEQSNE 534


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/649 (33%), Positives = 368/649 (56%), Gaps = 36/649 (5%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           + + +L+    ++G  +A +  + ++     + +  +    +KA   +S++  GM++HG 
Sbjct: 80  IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K     +P V   ++DMY+ CGRIN A  +FD M  + ++TWN MI  Y   G  D+ 
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF------------- 245
             LF +M++   +PDE    + + ACG  G++     I+ FLI +               
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259

Query: 246 ---------------PYSVKTV-IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
                            SV+ + ++ ++V  Y K G L +AR +FD  E K ++ W+++I
Sbjct: 260 YAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMI 319

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
             YA+ ++  EA+ +F ++    ++ D   + S++    +   +++ K +H Y     +G
Sbjct: 320 SAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHL--NG 377

Query: 350 LDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
           L++   + N++++MY KCG +D A ++F +MP +NVV+W+ +I  +  HG A +++ LF 
Sbjct: 378 LESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFA 437

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +M  ++VEP+ V ++ VL  CSHSGLVEE ++ F+ + ++  + P+IEHY C+VD  GRA
Sbjct: 438 QMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRA 497

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
             L EA  +IESMP+ P++ IW +L+SACRVHG+LELG    + +L+L+ D+    V+MS
Sbjct: 498 NLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMS 557

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLM 587
           NI+A    W+    +R +   K + K  G S ++++ + H F  GD  H  + +I+  L 
Sbjct: 558 NIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLY 617

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK--VI 645
           E+  ++K   G+V      L D++EE K++ +  HSEKLA+   L+     E+ G   VI
Sbjct: 618 EVVSKLKLA-GYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVI 676

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLRVC DCH F K +SK+ +L  +VRD TRFHR++ G+CSC DYW
Sbjct: 677 RIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 131/245 (53%), Gaps = 2/245 (0%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           +L ++  ++  Y+K G ++ A  +FD+   +++V WT ++  + ++ + +  L +F +M 
Sbjct: 280 NLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMC 339

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
            S +KP+  T+ + I A   L +++    +H     +G E    + N++I+MY+KCG ++
Sbjct: 340 CSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLD 399

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +F+ MP +++++W++MI  + + G +   L LF +M++    P+E TF   L  C 
Sbjct: 400 AARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCS 459

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ-KSVIS 284
             G V  G +I   + T  +  + K    G +VD + +   L EA  V + +    +V+ 
Sbjct: 460 HSGLVEEGKKIFASM-TDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVI 518

Query: 285 WSSLI 289
           W SL+
Sbjct: 519 WGSLM 523


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/603 (36%), Positives = 341/603 (56%), Gaps = 44/603 (7%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++     +H   +K G      + N+++++Y KCG  + A ++FD MP +  I W +++ 
Sbjct: 18  TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
               A  S K L +F  +     + PD+F F++ +KAC +LGS+  G Q+H   I S   
Sbjct: 78  ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS--E 135

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           Y+   V+  SLVD Y KCG L  A+ VFD I  K+ ISW++++ GYA+     EA+ELFR
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195

Query: 307 QL--------------------------------RERSLQVDGFVLSSMMGVFADFALVE 334
            L                                RER   +D  VLSS++G  A+ A   
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255

Query: 335 QGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
            G+Q+H     +  G D+ V  SN+++DMY KC  +  A ++F+ M  ++VV+WT +I G
Sbjct: 256 AGRQVHGLV--IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             +HG A++A+ L+  M+   V+P+ V ++ ++ ACSH G VE+ +E F  +  D  ++P
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++HY+C++D LGR+G LDEA+NLI +MP  P    W  LLSAC+  G  ++G  + + L
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433

Query: 513 L-RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           +      +P  Y+++SNI+A A  W +    R+      ++K  G S VEV KE   FY 
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           G+ +HPL E I ++L ++E+ M+   G+V    + LHD+ E+ KE+ L  HSE+ A+   
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L++      PG  IR+ KNLRVCGDCH  +K +S+I +   +VRDATR+H F+GG CSC 
Sbjct: 554 LLKA----VPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609

Query: 692 DYW 694
           D+W
Sbjct: 610 DFW 612



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 4/201 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+HG ++ +GF   + ++N LIDMYAKC ++  A  +F +M  R+VVSWT+L+ G  Q
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPV 149
           +G A+  L+L+  M S  VKPNE T    I A   +  VE G ++   M    G   +  
Sbjct: 317 HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
               ++D+  + G ++EA  +   MP      TW A+++     G    G+ +   +   
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436

Query: 209 GEIPDEFTFT--STLKACGSL 227
            ++ D  T+   S + A  SL
Sbjct: 437 FKLKDPSTYILLSNIYASASL 457


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/582 (35%), Positives = 332/582 (57%), Gaps = 11/582 (1%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           +F +ST  K   +        Q+H     +G   + +V N ++ M +K   +  A  +F+
Sbjct: 4   DFFISTLFKCRNIFQI----KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFN 59

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            M  +  ++W+ MI G+V  G  ++    FR++   G  PD F+    +KAC     +  
Sbjct: 60  KMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIM 119

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  IH  ++ +G    +   +  +LVD Y KCG +  A+++FD + +K +++ + +I GY
Sbjct: 120 GRLIHSTVLKNGL--HLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGY 177

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           A+     E+  LF Q+R      D   + +++   A    + + + +H Y       LD 
Sbjct: 178 AECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDV 237

Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
            +  +++DMY KCG ID + E+F+ M  KNV++W+ +I  YG HG  +EA+ LF  ML  
Sbjct: 238 ELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNS 297

Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
            + P+ + ++++L ACSH+GLV++  + FS +     ++P ++HY+C+VD LGRAGRLD+
Sbjct: 298 GIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQ 357

Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
           A  LIE+M V+    IW   L ACR+H  ++L  +  ++LL L   NP +Y+++SNI+A+
Sbjct: 358 ALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYAN 417

Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
           AG W +  ++R L   + LKK+ G +W+EVD  I+ F  GD++H  + +I+++L  + ++
Sbjct: 418 AGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQK 477

Query: 593 MKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
           + E  G+V      LHD+ EE K   L  HSEKLAI   L+        G  IR+ KNLR
Sbjct: 478 L-ESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLI----ATPDGTPIRITKNLR 532

Query: 653 VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           VCGDCH F K +S I +   +VRDA RFH F+ G+CSCGDYW
Sbjct: 533 VCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 191/351 (54%), Gaps = 5/351 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  +   G   DL++ N L+ M AK  ++  A  +F+KM ER+ VSW+ ++ GF++NG
Sbjct: 21  QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNG 80

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           + + C   F ++  +  KP+ F+L   IKA      +  G  IH   +K+G   +  V +
Sbjct: 81  DYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCS 140

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMY+KCG I+ A ++FD MP K L+T   MIAGY   G  ++  +LF +M+  G +P
Sbjct: 141 TLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVP 200

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D+    + + AC  LG++     +H ++      YS+   +  +++D Y KCG +  +R 
Sbjct: 201 DKVAMVTIVNACAKLGAMNKARLVHDYVCAR--RYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD +EQK+VISWS++I  Y       EA+ELF  +    +  +     S++   +   L
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK 381
           V+ G Q+ +  + V  G+   V +   +VD+  + G +D+A  L   M V+
Sbjct: 319 VDDGLQLFSLMS-VSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVE 368



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 5/262 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C   + L  G  +H  ++K G   D  + + L+DMYAKCG ++ A  +FD+M ++++
Sbjct: 108 IKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDL 167

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+ T ++ G+ + G       LF QM      P++  + T + A   L ++     +H  
Sbjct: 168 VTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDY 227

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                +  +  +G ++IDMY+KCG I+ +  +FD M  K++I+W+AMI  Y   G   + 
Sbjct: 228 VCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREA 287

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           L LF  M   G IP+  TF S L AC   G V  G Q+   +  S   Y V+  +     
Sbjct: 288 LELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVS---YGVRPDVKHYTC 344

Query: 257 LVDFYVKCGCLVEARRVFDLIE 278
           +VD   + G L +A R+ + +E
Sbjct: 345 MVDLLGRAGRLDQALRLIENME 366



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 91/169 (53%), Gaps = 3/169 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            V ++  +   +  C+K   ++    +H  +    +S D+ L   +IDMYAKCG ++ + 
Sbjct: 198 FVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSR 257

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +FD+M ++NV+SW+A++  +  +G  +  L LF  M +S + PN  T  + + A     
Sbjct: 258 EIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM 174
            V++G+Q+  + M   +   P V +   ++D+  + GR+++A R+ + M
Sbjct: 318 LVDDGLQLFSL-MSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 339/581 (58%), Gaps = 11/581 (1%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           LS  ++AS   S  +   +IH + +++GF     +   +++     G +  A ++FD M 
Sbjct: 13  LSELLRASS--SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
              +  WN +  GYV      + LLL++KM++ G  PDEFT+   +KA   LG    G  
Sbjct: 71  KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H  ++  GF      ++A  LV  Y+K G L  A  +F+ ++ K +++W++ +    Q 
Sbjct: 131 LHAHVVKYGF--GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            N A A+E F ++   ++Q D F + SM+        +E G++I+  A K     +  V 
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+ +DM+LKCG  + A  LF EM  +NVV+W+ +I GY  +G ++EA+ LF  M  + + 
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLC--NDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           P+ V +L VLSACSH+GLV E + YFS +   NDK ++PR EHY+C+VD LGR+G L+EA
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
              I+ MPV+P   IW  LL AC VH D+ LG++V ++L+    D    +V++SNI+A A
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G W+  +++R   R  G KKVA  S VE + +IHFF  GD +HP ++ I++ L E+ K++
Sbjct: 429 GKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKI 488

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           + ++G+V       HD++ E KE SL  HSEKLAI   L++G    +PG  IRV KNLR 
Sbjct: 489 R-KMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKG----RPGHPIRVMKNLRT 543

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           C DCH F K +S +     ++RD  RFH F  GVCSC ++W
Sbjct: 544 CDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H  +++ GFS    L   L++     G+M  A  VFD+M +  +  W  L  G+++N 
Sbjct: 29  KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L L+ +M    V+P+EFT    +KA   L     G  +H   +K GF    +V  
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            ++ MY K G ++ A  +F+ M  K L+ WNA +A  V  G S   L  F KM       
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT  S L ACG LGS+  G +I+          ++  ++  + +D ++KCG    AR 
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI--IVENARLDMHLKCGNTEAARV 266

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +F+ ++Q++V+SWS++I+GYA   +  EA+ LF  ++   L+ +      ++   +   L
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNS------IVDMYLKCGLIDEATELFNEMPVK-NVVT 385
           V +GK+   Y + +    D ++         +VD+  + GL++EA E   +MPV+ +   
Sbjct: 327 VNEGKR---YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383

Query: 386 WTVIITGYGKH 396
           W  ++     H
Sbjct: 384 WGALLGACAVH 394



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 116/214 (54%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  LH  +VK GF    ++  +L+ MY K GE++ A  +F+ M  +++V+W A +   +Q
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            GN+   L  F +M + +V+ + FT+ + + A G L S+E G +I+    K   + N +V
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+ +DM+ KCG    A  +F+ M  +++++W+ MI GY + G S + L LF  MQ  G 
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL 307

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
            P+  TF   L AC   G V  G +    ++ S 
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF++VS        L  C +   L+ G +++    K     ++++ N  +DM+ KCG   
Sbjct: 210 SFTVVS-------MLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +F++M +RNVVSW+ ++ G+  NG+++  L+LF  M +  ++PN  T    + A  
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322

Query: 125 VLSSVENGMQIHGMCMKS---GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI- 180
               V  G +   + ++S     E        ++D+  + G + EA      MP +    
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382

Query: 181 TWNAMIAG 188
            W A++  
Sbjct: 383 IWGALLGA 390


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/723 (31%), Positives = 371/723 (51%), Gaps = 56/723 (7%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK-CGEMNGA 66
           L+ ++   A +L        LD    L    +K GF  D+++   ++++Y++    ++ A
Sbjct: 220 LLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTA 279

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              F+ M+ERN  +W+ ++      G   A ++++ +    S+      L T +   G +
Sbjct: 280 IKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQCGRI 338

Query: 127 SSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
                         +  FE  P    V  N++I  Y + G +NEA  +FD MP ++ I+W
Sbjct: 339 DDA-----------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISW 387

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
             MIAGY   G S++ L L +++   G +P   + TS   AC ++ ++  GTQ+H   + 
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447

Query: 243 SGFPYSVKTVIAGSLVDFYVKC-------------------------------GCLVEAR 271
            G  ++  +    +L+  Y KC                                 L EAR
Sbjct: 448 VGCQFN--SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEAR 505

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
             FD +  +  +SW+++I  YA  E   EAM  F+ +       +  +L+ ++GV     
Sbjct: 506 NTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLG 565

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
             + G+QIH  A K+    +  V+N+++ MY KCG  D +  +F+ M  +++ TW  IIT
Sbjct: 566 ASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIIT 624

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY +HGL +EA+ +++ M    V P+ V ++ +L+ACSH+GLV+E  ++F  +  D  + 
Sbjct: 625 GYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLT 684

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  EHY+C+VD LGR G +  A+  I  MP++P   IW  LL AC++H + E+G+   E 
Sbjct: 685 PLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEK 744

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           L R++  N  NYVM+SNI++  G W E   +RK+ + +G+ K  G SW ++  ++H F  
Sbjct: 745 LFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVT 804

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD  H   E+I   L E+   +K   G+V   ++ LHDI EE KE SL  HSEKLA+   
Sbjct: 805 GDKQHEQIEEIVATLEELYTLLKAT-GYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           L    L    G  I++ KNLR+CGDCH FIK +S + K    +RD  RFH F  G CSC 
Sbjct: 864 L----LATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCE 919

Query: 692 DYW 694
           D+W
Sbjct: 920 DFW 922



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 197/402 (49%), Gaps = 15/402 (3%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           S D+   N ++  Y    +M  A  +F+KM ERN+VSWT ++ G+ +  N      +FC+
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK-CG 162
           M    + P++   ++ + A   L +++    +  + +K+GFE + V+G +I+++YS+   
Sbjct: 215 MHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            ++ A + F+ M  ++  TW+ MIA     G  D  + ++ +      I       + L 
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-DPVKSIACRTALITGLA 333

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            CG +            ++    P  +  V   +L+  Y++ G + EA+ +FD +  ++ 
Sbjct: 334 QCGRIDDAR--------ILFEQIPEPI-VVSWNALITGYMQNGMVNEAKELFDKMPFRNT 384

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ISW+ +I GYAQ     EA+ L ++L    +      L+S+    ++   +E G Q+H+ 
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A KV    ++   N+++ MY KC  ++ A ++F+ M  K++V+W   +    ++ L  EA
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
              F  ML      D V++  ++SA +H+    E+   F  +
Sbjct: 505 RNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/516 (22%), Positives = 238/516 (46%), Gaps = 63/516 (12%)

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           + G +  A  VFD M  R++++W +++  +  NG   A   L+  +   +++     LS 
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105

Query: 119 NIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
             +   VL +  V +GM           E N V  N++I  Y + G I  A R+FD MP+
Sbjct: 106 YGRLGRVLEARRVFDGM----------LERNTVAWNAMISCYVQNGDITMARRLFDAMPS 155

Query: 177 KSLITWNAMIAGY--------------------------VLAGYSD-----KGLLLFRKM 205
           + + +WN+M+ GY                          +++GY       K   +F KM
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK-C 264
              G +PD+  F S L A   LG++     +    + +GF   V  VI  ++++ Y +  
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDV--VIGTAILNVYSRDT 273

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
             L  A + F+ + +++  +WS++I   +    +  A+ ++ +   +S+     +++ + 
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL- 332

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              A    ++  + +     ++P  +  S  N+++  Y++ G+++EA ELF++MP +N +
Sbjct: 333 ---AQCGRIDDARILF---EQIPEPIVVSW-NALITGYMQNGMVNEAKELFDKMPFRNTI 385

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +I GY ++G ++EA+GL +++    + P   +  ++  ACS+   +E   +  S  
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 445 CNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
               ++  +   ++C  ++   G+   ++ A+ +   M  K  I  W + L+A   +  L
Sbjct: 446 V---KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQNDLL 501

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           +  R   + +L  D    V++  + + +A A   NE
Sbjct: 502 DEARNTFDNMLSRD---DVSWTTIISAYAHAEQSNE 534


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/571 (36%), Positives = 336/571 (58%), Gaps = 7/571 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G  +H  +V  GF+  + ++  L++MYAK G +  +  VF+ M E N VSW A++ G
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              NG       LF +M + +  PN +TL +  KA G L  V  G ++     + G E N
Sbjct: 243 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 302

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDV--MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
            +VG ++IDMYSKCG +++A  +FD   +       WNAMI+GY  +G S + L L+ +M
Sbjct: 303 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 362

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            ++G   D +T+ S   A  +  S+  G  +HG ++  G    V +V   ++ D Y KCG
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV-NNAIADAYSKCG 421

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L + R+VFD +E++ ++SW++L+  Y+Q     EA+  F  +RE     + F  SS++ 
Sbjct: 422 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 481

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
             A    +E G+Q+H    K  +GLDT   + ++++DMY KCG I EA ++F+++   ++
Sbjct: 482 SCASLCFLEYGRQVHGLLCK--AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI 539

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           V+WT II+GY +HGL ++A+ LFR+M L  ++ + V  L VL ACSH G+VEE   YF +
Sbjct: 540 VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQ 599

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + +   + P +EHY+CI+D LGR GRLD+A   I  MP++P+  +WQTLL  CRVHG++E
Sbjct: 600 MEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE 659

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           LG      +L +  +    YV++SN + + GS+ +   LR + + +G+KK  G SW+ V 
Sbjct: 660 LGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVK 719

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
             +H FY GD  HP  ++I+  L E+ +++K
Sbjct: 720 GRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 257/505 (50%), Gaps = 21/505 (4%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLM-LNNDLIDMYAKCGEMNGAC 67
           ++ Q L D LR C++   +     +HG ++K  F   DLM L N    +Y+KC E   AC
Sbjct: 62  TQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAAC 121

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD+M +RNV SWT ++ G  ++G        FC+M +S + P++F  S  I++   L 
Sbjct: 122 GVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLD 181

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+E G  +H   +  GF  +  V  S+++MY+K G I ++  +F++M   + ++WNAMI+
Sbjct: 182 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 241

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G    G   +   LF +M+     P+ +T  S  KA G L  V  G ++       G   
Sbjct: 242 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 301

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELF 305
           +V  ++  +L+D Y KCG L +AR VFD   I       W+++I GY+Q     EA+EL+
Sbjct: 302 NV--LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELY 359

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD---TSVSNSIVDMY 362
            Q+ +  +  D +   S+    A    ++ G+ +H    K   GLD    SV+N+I D Y
Sbjct: 360 VQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC--GLDLMVVSVNNAIADAY 417

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG +++  ++F+ M  +++V+WT ++T Y +  L +EA+  F  M  +   P+   + 
Sbjct: 418 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 477

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIE 478
           +VL +C+    +E  ++    LC     K  ++   CI    +D   + G + EA  + +
Sbjct: 478 SVLISCASLCFLEYGRQVHGLLC-----KAGLDTEKCIESALIDMYAKCGSITEAGKVFD 532

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLE 503
            +   P I  W  ++S    HG +E
Sbjct: 533 KIS-NPDIVSWTAIISGYAQHGLVE 556



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 4/190 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+YG Q+HG L K G   +  + + LIDMYAKCG +  A  VFDK+   ++
Sbjct: 480 LISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI 539

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWTA++ G+ Q+G  +  L LF +M  S +K N  TL   + A      VE G+  +  
Sbjct: 540 VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQ 598

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYS 195
            M+ G+   P + +   IID+  + GR+++A      MP + + + W  ++ G  + G  
Sbjct: 599 QMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV 658

Query: 196 DKGLLLFRKM 205
           + G +  RK+
Sbjct: 659 ELGEIAARKI 668


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/646 (34%), Positives = 362/646 (56%), Gaps = 11/646 (1%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+++Y+K      A +         VVS+TA + G  Q+    A LS F  M    ++PN
Sbjct: 51  LVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPN 110

Query: 113 EFTLSTNIKASGVLSS--VENGMQIHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAAR 169
           +FT  +  KA+          G QIH + ++ G+   +P V  + +DMY K G +  A R
Sbjct: 111 DFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARR 170

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F+ MP +++I WNA++   V+ G   +    +  ++E G +P+  +  +   AC     
Sbjct: 171 LFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMF 230

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G Q HGF++T GF   V   ++ ++VDFY KC C  +AR VFD +  ++ +SW S+I
Sbjct: 231 LSLGEQFHGFVVTCGFDMDVS--VSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMI 288

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
           + YAQ     +A+ ++   R    +   F++SS++   A    +  G+ +HA A +    
Sbjct: 289 VAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCID 348

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            +  V++++VDMY KCG +++A ++F +MP +N+VTW  +I GY   G A+ A+ +F  M
Sbjct: 349 ANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAM 408

Query: 410 LLDD-VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           +      P+ +  + V++ACS  GL ++  E F  +     ++PR EHY+C+VD LGRAG
Sbjct: 409 IRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAG 468

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
             + A  +I+ MP++PSI++W  LL AC++HG  ELGR   E L  LD  +  N+V++SN
Sbjct: 469 MEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSN 528

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           + A AG W E   +RK  ++ G+KK  G SW+     +H FY  D  H    +I  +L +
Sbjct: 529 MLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAK 588

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           ++K+M+   G++   +Y+L+D++EE KE  +  HSEKLA+   L+    +  P   IR+ 
Sbjct: 589 LKKQMQAS-GYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLI----HIPPSVPIRIT 643

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLR+C DCH   K +S I+    +VRD  RFH F+   CSC DYW
Sbjct: 644 KNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 3/270 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+  + L  G Q HG +V  GF  D+ ++N ++D Y KC     A AVFD M  RN VSW
Sbjct: 225 CAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSW 284

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            +++  + Q+G  +  L+++    ++  +P +F +S+ +     L  +  G  +H + ++
Sbjct: 285 CSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVR 344

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S  + N  V ++++DMY KCG + +A ++F  MP ++L+TWNAMI GY   G +   L +
Sbjct: 345 SCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAV 404

Query: 202 FRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F  M +  G  P+  T  + + AC   G    G ++    +   F    +T     +VD 
Sbjct: 405 FDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFD-TMRERFGVEPRTEHYACVVDL 463

Query: 261 YVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
             + G    A  +   +  +  IS W +L+
Sbjct: 464 LGRAGMEERAYEIIQRMPMRPSISVWGALL 493



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 180/388 (46%), Gaps = 14/388 (3%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P +   ++++YSK      AA      P  +++++ A I+G          L  F  M  
Sbjct: 45  PFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLR 104

Query: 208 HGEIPDEFTFTSTLK--ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
            G  P++FTF S  K  AC        G QIH   +  G+       ++ + +D Y K G
Sbjct: 105 VGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGY-LPGDPFVSCAAMDMYFKTG 163

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           CL  ARR+F+ +  ++VI+W++++     +    E  + +  LRE     +   + +   
Sbjct: 164 CLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFN 223

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A    +  G+Q H +       +D SVSN++VD Y KC    +A  +F+ M V+N V+
Sbjct: 224 ACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVS 283

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I  Y +HG  ++A+ ++        EP      +VL+ C  +GL+  +   F R  
Sbjct: 284 WCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTC--AGLLGLN---FGRAL 338

Query: 446 NDKRMKPRIEH----YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
           +   ++  I+      S +VD  G+ G +++A+ +   MP + ++  W  ++      GD
Sbjct: 339 HAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPER-NLVTWNAMIGGYAHIGD 397

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNI 529
            +    V + ++R  G +P N++ + N+
Sbjct: 398 AQNALAVFDAMIRSGGTSP-NHITLVNV 424



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+  L L++G  LH   V+     ++ + + L+DMY KCG +  A  VF  M ERN+
Sbjct: 323 LTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNL 382

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W A++ G+   G+A+  L++F  M  S    PN  TL   I A       ++G ++  
Sbjct: 383 VTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFD 442

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLAGY 194
             M+  F   P   +   ++D+  + G    A  +   MP +  I+ W A++    + G 
Sbjct: 443 T-MRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGK 501

Query: 195 SDKGLLLFRKMQE 207
           ++ G +   K+ E
Sbjct: 502 TELGRIASEKLFE 514


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/570 (38%), Positives = 337/570 (59%), Gaps = 15/570 (2%)

Query: 132 GMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
           G Q+H + ++SG F  +P   ++++ MY+ C R  +A + FD +P+ + +   AM +GYV
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 191 LAGYSDKGLLLFRKMQEHGEIP--DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
                   L LFRK+   G     DE        A   +   G  + +H  ++ +G    
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 249 VKTVIAGSLVDFYVKCGC--LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
              V   +++D Y K G   L  AR+VFD +E K V+SW+S+I  YAQ    A+A+ L+R
Sbjct: 228 AGVV--NTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYR 284

Query: 307 QLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           ++     S++ +   LS+++   A    ++ GK IH    ++    +  V  S+VDMY K
Sbjct: 285 KMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSK 344

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ++ A + F ++  KN+++W+ +ITGYG HG  +EA+ +F +M      P+ + +++V
Sbjct: 345 CGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV 404

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L+ACSH+GL+++ + +++ +     ++P +EHY C+VD LGRAG LDEA  LI+ M VKP
Sbjct: 405 LAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
             AIW  LLSACR+H ++EL     + L  LD  N   YV++SNI+A+AG W + ER+R 
Sbjct: 465 DAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRV 524

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           L +++G++K  G S VE+    H FY GD +HP  ++I+  L ++ ++M +E G+V    
Sbjct: 525 LVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKM-QEAGYVPNTG 583

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             LHD+ EE K  +L +HSEKLAI  AL    +N  PG VI V KNLRVC DCH  IK +
Sbjct: 584 SVLHDLDEEEKASALHIHSEKLAIAFAL----MNSVPGSVIHVIKNLRVCTDCHTAIKLI 639

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +KI +   +VRD  RFH F+ G CSCGDYW
Sbjct: 640 TKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 191/378 (50%), Gaps = 26/378 (6%)

Query: 31  GVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   ++ G F  D    + L+ MY  C     A   FD++   N V  TA+  G++
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 90  QNGNAKACLSLFCQM--GSSSVKPNE------FTLSTNIKASGVLSSVENGMQIHGMCMK 141
           +N      L+LF ++    S+   +E      F+ S  I   G+ SS      +H + +K
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSS------LHALVVK 221

Query: 142 SGFEWNPVVGNSIIDMYSKCGR--INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +G + +  V N+++D Y+K GR  +  A ++FD M  K +++WN+MIA Y   G S   L
Sbjct: 222 TGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADAL 280

Query: 200 LLFRKM-QEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L+RKM    G I  +  T ++ L AC   G++  G  IH  ++  G   +V   +  S+
Sbjct: 281 GLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV--YVGTSV 338

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           VD Y KCG +  AR+ F  I++K+++SWS++I GY    +  EA+++F ++       + 
Sbjct: 339 VDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNY 398

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
               S++   +   L+++G+  +  A K   G++  V +   +VD+  + G +DEA  L 
Sbjct: 399 ITFISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLI 457

Query: 376 NEMPVK-NVVTWTVIITG 392
            EM VK +   W  +++ 
Sbjct: 458 KEMKVKPDAAIWGALLSA 475



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M  VS S+      L+  L  C+    +  G  +H  +V+MG   ++ +   ++DMY+KC
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A   F K+ E+N++SW+A++ G+  +G+ +  L +F +M  S   PN  T  + +
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS 178
            A      ++ G   +   MK  F   P V +   ++D+  + G ++EA  +   M  K 
Sbjct: 406 AACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464

Query: 179 -LITWNAMIAG 188
               W A+++ 
Sbjct: 465 DAAIWGALLSA 475


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/735 (34%), Positives = 393/735 (53%), Gaps = 55/735 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MN+  +   S R  L  S+    ++L    G  LH   VK   +    L+N  +++Y+KC
Sbjct: 1   MNQTQWKFKSFRDLLLKSV--AERDLFT--GKSLHALYVKSIVASSTYLSNHFVNLYSKC 56

Query: 61  GEMNGACAVFDKMLERNV-------------------------------VSWTALMCGFL 89
           G ++ A A FD   E NV                               VS+  L+ G+ 
Sbjct: 57  GCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYA 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
                 A + LF +M     + + FTLS  I A      V+   Q+H   +  GF+    
Sbjct: 117 DARETVAAMVLFKRMRELGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFAVSGGFDSYSS 174

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           V N+ +  YSK G + EA  +F  M   +  ++WN+MI  Y       K L L+++M   
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC-- 266
           G   D FT  S L A  SL  + GG Q HG LI +GF  +  + +   L+DFY KCG   
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN--SHVGSGLIDFYSKCGGRD 292

Query: 267 -LVEARRVFDLIEQKSVISWSSLILGYA-QEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
            + ++ +VF  I    ++ W+++I GY+  EE+  EA++ FRQ++    + D      + 
Sbjct: 293 GMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVT 352

Query: 325 GVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
              ++ +   QGKQIH  A K  +PS    SV+N+++ +Y K G + +A  +F+ MP  N
Sbjct: 353 SACSNLSSPSQGKQIHGLAIKSNIPSN-RISVNNALISLYYKSGNLLDARRVFDRMPELN 411

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V++  +I GY +HG   EA+ L+++ML   + P+ + ++A+LSAC+H G V+E Q+YF+
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFN 471

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +    +++P  EHYSC++D LGRAG+L+EA+  I++MP KP    W  LL ACR H ++
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
            L     + L+ +       YVM++N++ADAG W E   +RK  R K ++K  G SW+EV
Sbjct: 532 ALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEV 591

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEESKEESLRV 621
            K+ H F   D +HP+  ++++ L EM K+MK ++G+V   K+A+  + +    EE +R+
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK-KVGYVMDKKWAMVKEDEAGEGEEEMRL 650

Query: 622 --HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLA+   L    ++ + G+ I V KNLR+CGDCH  IK +S +     +VRD  R
Sbjct: 651 GHHSEKLAVAFGL----MSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLR 706

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ G CSCGDYW
Sbjct: 707 FHCFKDGKCSCGDYW 721


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/565 (38%), Positives = 334/565 (59%), Gaps = 13/565 (2%)

Query: 134 QIHGMCMKSGFEW-NPVVGNSII-DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           QIH   ++ G    NP +G  +I  + S C  ++ A ++F  +   ++ TWN MI GY  
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAE 117

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           +      L L+R+M      PD  T+   LKA   L  V  G ++H   I +GF   V  
Sbjct: 118 SENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLV-- 175

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +LV  Y  CG    A ++F+L+ ++++++W+S+I GYA      EA+ LFR++  R
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLID 369
            ++ DGF + S++   A+   +  G++ H Y  KV  GLD ++   N+++D+Y KCG I 
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV--GLDGNLHAGNALLDLYAKCGSIR 293

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A ++F+EM  K+VV+WT +I G   +G  KEA+ LF+++    + P  + ++ VL ACS
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H G+V+E  +YF R+  +  + P+IEHY C+VD LGRAG + +A   I++MP++P+  +W
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
           +TLL AC +HG L LG      LL+L+  +  +YV++SN++A    W++  ++R+    +
Sbjct: 414 RTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLRE 473

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
           G+KK  G S VE+   +H F  GD +HP TE+I+  L E+ K +K E G+V  +   L D
Sbjct: 474 GVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLE-GYVPHISNVLAD 532

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           I+EE KE +L  HSEK+AI   L+    N   G  IRV KNLRVC DCH  IK +SK+  
Sbjct: 533 IEEEEKETALSYHSEKIAIAFMLI----NTAAGIPIRVVKNLRVCADCHLAIKLISKVFD 588

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              VVRD +RFH F+ G CSC DYW
Sbjct: 589 REIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 207/404 (51%), Gaps = 20/404 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDL-----IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           Q+H   ++ G     + N D+       + + C  M+ A  +F ++   N+ +W  ++ G
Sbjct: 58  QIHAFSIRHGVP---LTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRG 114

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + ++ N    L L+ QM  S ++P+  T    +KA   L  V  G ++H + +++GFE  
Sbjct: 115 YAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESL 174

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V N+++ MY+ CG    A ++F++M  ++L+TWN++I GY L G  ++ L LFR+M  
Sbjct: 175 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 234

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD FT  S L AC  LG++  G + H +++  G   ++      +L+D Y KCG +
Sbjct: 235 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA--GNALLDLYAKCGSI 292

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +A +VFD +E+KSV+SW+SLI+G A      EA+ELF++L  + L         ++   
Sbjct: 293 RQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC 352

Query: 328 ADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-N 382
           +   +V++G    K++      VP          +VD+  + GL+ +A E    MP++ N
Sbjct: 353 SHCGMVDEGFDYFKRMKEEYGIVP---KIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 409

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            V W  ++     HG    A+G   +  L  +EP       +LS
Sbjct: 410 AVVWRTLLGACTIHG--HLALGEVARAQLLQLEPKHSGDYVLLS 451



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 147/274 (53%), Gaps = 6/274 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+  +K + +  G ++H   ++ GF   + + N L+ MYA CG    A  +F+ M ERN+
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNL 206

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W +++ G+  NG     L+LF +MG   V+P+ FT+ + + A   L ++  G + H  
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY 266

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G + N   GN+++D+Y+KCG I +A ++FD M  KS+++W ++I G  + G+  + 
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           L LF++++  G +P E TF   L AC   G V  G     +       Y +   I   G 
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD---YFKRMKEEYGIVPKIEHYGC 383

Query: 257 LVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
           +VD   + G + +A   + ++  Q + + W +L+
Sbjct: 384 MVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 417


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 222/601 (36%), Positives = 348/601 (57%), Gaps = 40/601 (6%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS--KCGRINEAARMFDVMPAKSLITWNA 184
           S++E   QIHG  +K+G   + +  + ++   +    G +  A  +FD +   +   WN 
Sbjct: 29  SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY  +   ++ LLL+  M  H    + +TF   LKAC S+ ++    QIH  +I  G
Sbjct: 89  MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ---------- 294
           F   + T    SL++ Y K G +  AR +FD ++Q+  +SW+S+I GY +          
Sbjct: 149 FGSEIYTT--NSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206

Query: 295 -----EENL----------------AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                E N+                 EA+ LF +++   +++D   L S +   AD  ++
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           +QGK IHAY  K    +D  +   ++DMY KCG ++EA E+F +M  K V  WT +I+GY
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG  +EA+  F KM    VEP+ + +  +L+ACSH+GLV E++  F  +      KP 
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           IEHY C+VD LGRAG L EA+ LIE+MPVKP+ AIW  LL+AC +HG+LELG+++G+IL+
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
           ++D  +   Y+ +++IHA AG WN+  R+R+  + +G+ K+ G S + V+   H F  GD
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
           ++HP  ++I  +L ++ +R++EE G+   +   L D++++ KE ++  HSEKLA+   L+
Sbjct: 507 ESHPQIKEIDHMLEQIVERLREE-GYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
               + +PG  IR+ KNLRVC DCH  IK +SK+     ++RD TRFH F+ G C+CGDY
Sbjct: 566 ----STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDY 621

Query: 694 W 694
           W
Sbjct: 622 W 622



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 182/401 (45%), Gaps = 39/401 (9%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+HG ++K G   D +  + L+   A    G +  A  VFD++   N   W  ++ G+  
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +   +  L L+  M   SV  N +T    +KA   +S++E   QIH   +K GF      
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYT 155

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--------------------- 189
            NS++++YSK G I  A  +FD +  +  ++WN+MI GY                     
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI 215

Query: 190 ----------VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
                     V AG   + L LF +MQ  G   D     STL+AC  LG +  G  IH +
Sbjct: 216 ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAY 275

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +        +  ++   L+D Y KCG L EA  VF  +E+K V  W+++I GYA      
Sbjct: 276 I--KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGR 333

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           EA+E F +++   ++ +    + ++   +   LV + K +     ++  G   S+ +   
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI-HGFKPSIEHYGC 392

Query: 358 IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           +VD+  + GL+ EA EL   MPVK N   W  ++     HG
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDL-----MLN----------------------- 50
           L+ CS    L+   Q+H  ++KMGF  ++     +LN                       
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184

Query: 51  ---NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
              N +ID Y KCGE+  A  +F+ M ERN++SWT+++ G +  G  K  L+LF +M ++
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            +K +   L + ++A   L  ++ G  IH    K   E +P++G  +IDMY+KCG + EA
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 304

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F  M  K +  W AMI+GY + G   + L  F KMQ  G  P++ TFT  L AC   
Sbjct: 305 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 364

Query: 228 GSVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-W 285
           G V     +        GF  S++    G +VD   + G L EA  + + +  K   + W
Sbjct: 365 GLVHEAKLLFESMERIHGFKPSIEHY--GCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            +L+       NL    EL +Q+ +  +QVD
Sbjct: 423 GALLNACHIHGNL----ELGKQIGKILIQVD 449


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/701 (33%), Positives = 375/701 (53%), Gaps = 46/701 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDM--YAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  +++     D    ++L     ++    ++ A  VFD++ + N+ SW  L+     
Sbjct: 157 QIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALAT 216

Query: 91  NGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + +    + +F +M   S   PN+FT    IKA         G  +HGM +K+ F  +  
Sbjct: 217 SSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVF 276

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           V NS+I  Y+ CG ++ A  +F+++    K +++WN+M+ G+V  GY DK L LF +M+ 
Sbjct: 277 VLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRN 336

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P+  T  S + AC    ++  G ++  ++  +    ++   +  + +D +VKCG +
Sbjct: 337 EGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLN--VCNATIDMFVKCGEV 394

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQ--EENLA-------------------------- 299
             AR +FD +E++ V+SW+++I GYA+  E  +A                          
Sbjct: 395 EIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSG 454

Query: 300 ---EAMELFR--QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              EA+ +FR  QL +   + D   L S +   A    ++ G+ IH Y  K    L+ ++
Sbjct: 455 RPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNL 514

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           + S++DMY K G +++A E+F+ +  K+V  W+ +I G   HG  + A+ LF  M    V
Sbjct: 515 ATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQV 574

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P+ V +  +L ACSHSGLV+E +  F  +     + P+ +HYSC+VD LGRAG L+EA 
Sbjct: 575 KPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEAL 634

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
             IE MP+ PS ++W  LL AC +HG+LEL  +    LL ++  N   YV++SN++A  G
Sbjct: 635 KFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTG 694

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W     LR+  R  GLKK  G S +E+D  +H F  GD+ HPL+  I+  L E+  R++
Sbjct: 695 DWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLR 754

Query: 595 EELGFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
              G+V      L  ++EE  KE++L++HSEK+AI   L+R        + IR+ KNLRV
Sbjct: 755 SH-GYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRA----DSQQAIRIVKNLRV 809

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           C DCH   K +SK+     V+RD  RFH F GG CSC DYW
Sbjct: 810 CRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 207/435 (47%), Gaps = 45/435 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE---RNVVSWTALMCG 87
           G  +HG  +K  F  D+ + N LI  YA CG ++ A  VF+ M+E   +++VSW +++ G
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE-MIEGNNKDIVSWNSMVTG 317

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F+Q G     L LF +M +  V PN  T+ + + A     ++  G ++     ++    N
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377

Query: 148 PVVGNSIIDMYSKCGRINEAAR--------------------------------MFDVMP 175
             V N+ IDM+ KCG + E AR                                +FD MP
Sbjct: 378 LNVCNATIDMFVKCGEV-EIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMP 436

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ--EHGEIPDEFTFTSTLKACGSLGSVGGG 233
            K +  WN +I+GY  +G   + L +FR++Q  + G  PD+ T  STL AC  LG++  G
Sbjct: 437 RKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG 496

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
             IHG++        +   +A SL+D Y K G + +A  VF  I  K V  WS++I G A
Sbjct: 497 EWIHGYIKKERI--QLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLA 554

Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
                  A+ELF  ++E  ++ +    ++++   +   LV++GK++     +V   +  +
Sbjct: 555 MHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKT 614

Query: 354 VSNS-IVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
              S +VD+  + G ++EA +    MP+  +   W  ++     HG  + A     ++L 
Sbjct: 615 KHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLL- 673

Query: 412 DDVEPDGVAYLAVLS 426
            ++EP       +LS
Sbjct: 674 -EIEPGNHGAYVLLS 687



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 33/251 (13%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+K + L  G ++   + +     +L + N  IDM+ KCGE+  A  +FD M +R+V
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409

Query: 79  VSWTA-------------------------------LMCGFLQNGNAKACLSLF--CQMG 105
           VSWT                                L+ G+ Q+G  K  L++F   Q+ 
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
            S  +P++ TL + + A   L +++ G  IHG   K   + N  +  S+IDMYSK G + 
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVE 529

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A  +F  +  K +  W+AMIAG  + G  +  + LF  MQE    P+  TFT+ L AC 
Sbjct: 530 KAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACS 589

Query: 226 SLGSVGGGTQI 236
             G V  G ++
Sbjct: 590 HSGLVDEGKRL 600


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/717 (34%), Positives = 385/717 (53%), Gaps = 53/717 (7%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
            SF+LVS    +A +       LLL  G Q+H  +++ G  +    NN L+ MYAK G +
Sbjct: 185 TSFTLVS----VAHACSNLINGLLL--GKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRV 237

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
             A  +FD   ++++VSW  ++    QN   +  L     M  S V+PN  TL++ + A 
Sbjct: 238 YEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297

Query: 124 GVLSSVENGMQIHG-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
             L  +  G +IH  + M +    N  VG +++DMY  C +  +   +FD M  +++  W
Sbjct: 298 SHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVW 357

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           NAMIAGYV   +  + + LF +M  E G  P+  T +S L AC    S      IH  ++
Sbjct: 358 NAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVV 417

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY--------- 292
             GF       +  +L+D Y + G +  AR +F  + +K ++SW+++I GY         
Sbjct: 418 KWGF--EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDA 475

Query: 293 ---------AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
                     Q E+     + +   +   L+ +   L +++   A  A + +GK+IHAYA
Sbjct: 476 LNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYA 535

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D +V +++VDMY KCG ++ +  +F +M V+NV+TW V+I  YG HG  +EA+
Sbjct: 536 VKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEAL 595

Query: 404 GLFRKMLLD-----DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
            LFR+M+ +     ++ P+ V Y+A+ ++ SHSG+V+E    F  +     ++P  +HY+
Sbjct: 596 KLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYA 655

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVK-PSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           C+VD LGR+G+++EA NLI++MP     +  W +LL AC++H +LE+G    + L  LD 
Sbjct: 656 CLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLD- 714

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
            N ++Y    ++            L +  + KG++K  G SW+E   E+H F  GD +HP
Sbjct: 715 PNVLDYGTKQSM------------LGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHP 762

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
            ++++H+ L  +  RMK+E G+V      LH++ EE KE  L  HSE+LAI   L    L
Sbjct: 763 QSKEVHEYLETLSLRMKKE-GYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGL----L 817

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           N  PG  IRV KNLRVC DCH   K +SKI+    ++RD  RFH F  G CSCGDYW
Sbjct: 818 NTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 252/514 (49%), Gaps = 29/514 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G QLH  + K G +    + N L++MY KCG+++ A  VFD++  R+ VSW +++  
Sbjct: 101 LNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINA 160

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVENGMQIHGMCMKSGFEW 146
             +    +  + LF  M   +V P  FTL +   A S +++ +  G Q+H   +++G +W
Sbjct: 161 ACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DW 219

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
                N+++ MY+K GR+ EA  +FDV   K L++WN +I+        ++ LL    M 
Sbjct: 220 RTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVML 279

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           + G  P+  T  S L AC  L  +G G +IH F++ +       + +  +LVD Y  C  
Sbjct: 280 QSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNN-DLIENSFVGCALVDMYCNCKQ 338

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMG 325
             + R VFD + ++++  W+++I GY + E   EA+ELF ++  E  L  +   LSS++ 
Sbjct: 339 PEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLP 398

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                      + IH+   K     D  V N+++DMY + G I+ A  +F  M  K++V+
Sbjct: 399 ACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVS 458

Query: 386 WTVIITGYGKHGLAKEAVGLFRKM----------LLDDVE--------PDGVAYLAVLSA 427
           W  +ITGY   G   +A+ L   M            DD E        P+ V  + VL  
Sbjct: 459 WNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPG 518

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C+    + + +E  +     + +   +   S +VD   + G L+ ++ + E M V+ ++ 
Sbjct: 519 CAALAALGKGKEIHAYAVK-QMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVI 576

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRL--DGDN 519
            W  L+ A  +HG    G E  ++  R+  +GDN
Sbjct: 577 TWNVLIMAYGMHGK---GEEALKLFRRMVEEGDN 607



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 206/423 (48%), Gaps = 37/423 (8%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +S +  M ++ V P+ F     +KA+  +  +  G Q+H    K G      V NS+++M
Sbjct: 70  ISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNM 129

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y KCG I+ A R+FD +  +  ++WN+MI         +  + LFR M      P  FT 
Sbjct: 130 YGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTL 189

Query: 218 TSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            S   AC +L  + G   G Q+H F++ +G     +T    +LV  Y K G + EA+ +F
Sbjct: 190 VSVAHACSNL--INGLLLGKQVHAFVLRNG---DWRTFTNNALVTMYAKLGRVYEAKTLF 244

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D+ + K ++SW+++I   +Q +   EA+     + +  ++ +G  L+S++   +   ++ 
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304

Query: 335 QGKQIHAYAAKVPSGLDTS-VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
            GK+IHA+       ++ S V  ++VDMY  C   ++   +F+ M  + +  W  +I GY
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364

Query: 394 GKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACS-----------HSGLVEESQEYF 441
            ++    EA+ LF +M+ +  + P+ V   +VL AC            HS +V+   E  
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFE-- 422

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA---CRV 498
                DK ++      + ++D   R GR++ A+++  SM  K  I  W T+++    C  
Sbjct: 423 ----KDKYVQ------NALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMITGYVVCGR 471

Query: 499 HGD 501
           H D
Sbjct: 472 HDD 474



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 7/214 (3%)

Query: 285 WSSLILGYAQEEN-LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           W S +    Q  +   +A+  +  +    +  D F   +++   A    +  GKQ+HA+ 
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K    L T+V NS+V+MY KCG ID A  +F+E+  ++ V+W  +I    +    + AV
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
            LFR MLL++V P     ++V  ACS+  +GL+   Q +   L N      R    + +V
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW---RTFTNNALV 228

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
               + GR+ EAK L +    K  ++ W T++S+
Sbjct: 229 TMYAKLGRVYEAKTLFDVFDDKDLVS-WNTIISS 261


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/614 (35%), Positives = 349/614 (56%), Gaps = 12/614 (1%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W  L+    + G   A L +F  + SS+ +PN  T +  + A   L  ++    +     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
            +G+  +  V ++++ +YS+CG + EA R+FD MP K  + W+ M+AG+V AG   + L 
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           ++ +M+EHG   DE      ++AC S G+   G  +HG L+       V T    SLV  
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTT--SLVSM 252

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y K G L  A +VF ++  ++ ++WS+LI G+AQ     EA++LFR+L+   LQ   + L
Sbjct: 253 YAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWAL 312

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S +   A    ++ GK IH +  +        +  +++DMY KCG ++ A +LFN++  
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRRLE-WQCILGTAVLDMYSKCGSLESARKLFNKLSS 371

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           +++V W  II   G HG   +A+ LF+++    ++PD   + ++LSA SHSGLVEE + +
Sbjct: 372 RDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 431

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F R+  +  ++P  +HY CIVD L R+G ++EA +++ SM  +P+IAIW  LLS C  + 
Sbjct: 432 FDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNK 491

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
            LELG  + + +L L  ++     ++SN++A A  W++   +RKL +  G KKV G S +
Sbjct: 492 KLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 551

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           EV    H F   D +HP   +I +++ ++   M+ +LG+V   ++  HD+ E   ++ L 
Sbjct: 552 EVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMR-KLGYVPRTEFVYHDLDE---DQLLS 607

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSE+LAI   L    LN  PG  + + KNLRVCGDCH+ IK +SKI+    VVRDA RF
Sbjct: 608 YHSERLAIAFGL----LNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRF 663

Query: 681 HRFEGGVCSCGDYW 694
           H F+ G CSCGDYW
Sbjct: 664 HHFKDGACSCGDYW 677



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 214/412 (51%), Gaps = 9/412 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C++   LD    +       G+  D+ + + L+ +Y++CG M  A  VFD M  ++
Sbjct: 113 TLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKD 172

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+ ++ GF+  G     L+++ +M    V  +E  +   I+A     +   G  +HG
Sbjct: 173 RVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHG 232

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++     + V   S++ MY+K G ++ A ++F +MP ++ +TW+A+I+G+   G + +
Sbjct: 233 RLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVE 292

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR++Q  G  P  +   S L AC S+G +  G  IHGF++        + ++  ++
Sbjct: 293 ALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR---LEWQCILGTAV 349

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L  AR++F+ +  + ++ W+++I          +A+ LF++L E  ++ D 
Sbjct: 350 LDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDH 409

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
              +S++   +   LVE+GK       K   G++ +  +   IVD+  + GL++EA ++ 
Sbjct: 410 ATFASLLSALSHSGLVEEGKFWFDRMIK-EFGIEPAEKHYVCIVDLLARSGLVEEANDML 468

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             M  +  +  W ++++G   +   +    + +K+L  ++ P+ +  LA++S
Sbjct: 469 ASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKIL--ELRPEDIGVLALVS 518


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/653 (34%), Positives = 353/653 (54%), Gaps = 48/653 (7%)

Query: 50  NNDLIDMYAKCGEMNGACAVF-----DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
           N  LI  YA C  +  A  V      D       V +  L+     +   +  L LF  M
Sbjct: 53  NVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASM 112

Query: 105 GS--SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
                +  P+ +T    +K+      +  G+QIH    K   + N  V +S I MYS+CG
Sbjct: 113 RPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCG 172

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTL 221
           R  +A R+FD MP + +++WNAMIAG+   G  D+ + +F++ +   G +PD  T    L
Sbjct: 173 RPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGIL 232

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
            A G+                   P  ++ V                  RRVFD ++ K 
Sbjct: 233 PAMGN-----------------AKPDDIRFV------------------RRVFDNMQFKE 257

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +ISW++++  YA  E   +A+ELF  + +  ++ D   L++++    + +    GK+IH 
Sbjct: 258 LISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHE 317

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
              +     +  + N+++DMY  CG + +A E+F+ M  ++V++WT II+ YGKHG  +E
Sbjct: 318 IIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGRE 377

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           AV LF KML   +EPD +A++AVL+ACSH+GL+ + + YF  + +   + P+ EHY+C+V
Sbjct: 378 AVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMV 437

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGRAG ++EA + I +M ++P+  +W  LL ACR+H ++++G    + L  L  +   
Sbjct: 438 DLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTG 497

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            YV++SN++A AG W +   +R +  +KG+KK  G S VE+  ++H F+ GD  HP +E 
Sbjct: 498 YYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEM 557

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I+  L E+  +++  +G+   V+  LHD++EE KE+ L VHSEKLAI   L    LN  P
Sbjct: 558 IYHKLDELLGKIR-GMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLL----LNTSP 612

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G +IRV  NLR C DCH   K +S I     V++D  R H    GVCSCGDYW
Sbjct: 613 GTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 187/411 (45%), Gaps = 38/411 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS +  L  G+Q+H A+ K+    ++ + +  I MY++CG    A  VFD M  R+
Sbjct: 129 ALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRD 188

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW A++ GF + G     + +F Q            L  ++  +G ++ +        
Sbjct: 189 VVSWNAMIAGFARVGLFDRAIEVFKQF---------VVLQGSMPDAGTMAGIL------- 232

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
                     P +GN      +K   I    R+FD M  K LI+WNAM+A Y    +  K
Sbjct: 233 ----------PAMGN------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVK 276

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + LF  M++    PD  T  + L  CG L +   G +IH  +           ++  +L
Sbjct: 277 AVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNM--CPNLLLENAL 334

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y  CGCL +AR +FDL+  + VISW+S+I  Y +  +  EA++LF ++  + L+ D 
Sbjct: 335 MDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDS 394

Query: 318 FVLSSMMGVFADFALVEQGKQ-IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
               +++   +   L+  GK    +  ++            +VD+  + G I+EA +   
Sbjct: 395 IAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFIT 454

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            M ++ N   W  ++     H  +   +GL     L  + P+   Y  +LS
Sbjct: 455 TMLIEPNERVWGALLQACRIH--SNMDIGLVAADNLFSLVPEQTGYYVLLS 503



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 8/191 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C +      G ++H  + +     +L+L N L+DMYA CG +  A  +FD M 
Sbjct: 296 LATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMS 355

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+V+SWT+++  + ++G+ +  + LF +M    ++P+       + A      + +G  
Sbjct: 356 ARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKH 415

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM---PAKSLITWNAMIAGY 189
                M S +   P   +   ++D+  + G INEA      M   P + +  W A++   
Sbjct: 416 YFD-SMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERV--WGALLQAC 472

Query: 190 VLAGYSDKGLL 200
            +    D GL+
Sbjct: 473 RIHSNMDIGLV 483


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/591 (36%), Positives = 341/591 (57%), Gaps = 13/591 (2%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M    V  +  T S  IK      +V+ G ++H      G+E    V N++++MY K   
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + EA  +FD MP +++++W  MI+ Y     +DK L     M   G  P+ FT++S L+A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  L ++    Q+H  +I +G    V   +  +L+D Y K   L  A  VFD +  + ++
Sbjct: 165 CDGLPNL---RQLHCGIIKTGLESDV--FVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
            W+S+I G+AQ  +  EA+ LF++++      D   L+S++      AL+E G+Q+H + 
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHV 279

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D  ++N+++DMY KCG +++A   F+ M  K+V++W+ ++ G  ++G +++A+
Sbjct: 280 LKFDQ--DLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQAL 337

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF  M      P+ +  L VL ACSH+GLVE+   YF  +     + P  EHY C++D 
Sbjct: 338 ELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDL 397

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGRAGRLDEA  LI  M  +P    W+TLL ACRVH +++L     + ++ L+ ++   Y
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTY 457

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           +++SNI+A+   W +   +RK   ++G++K  G SW+EVDK+IH F  GD +HP  E+I 
Sbjct: 458 ILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIV 517

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
           Q L ++ +R+   +G+V    + L D++ E KE+SLR HSEKLAI   L    +N    K
Sbjct: 518 QRLNDLIERVM-GVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGL----MNLSREK 572

Query: 644 VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            +R+ KNLR+CGDCH F K +S++     V+RD  R+H F+ GVCSCGDYW
Sbjct: 573 TVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 220/413 (53%), Gaps = 18/413 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++CCS    +  G ++H  +   G+   + + N L++MY K   +  A  +FD+M ERNV
Sbjct: 62  IKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNV 121

Query: 79  VSWTALMCGFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VSWT ++  +    N KA  CL L  + G   V+PN FT S+ ++A   L ++    Q+H
Sbjct: 122 VSWTTMISAYSNKLNDKALKCLILMFREG---VRPNMFTYSSVLRACDGLPNLR---QLH 175

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K+G E +  V +++ID+YSK   ++ A  +FD MP + L+ WN++I G+      +
Sbjct: 176 CGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGN 235

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LF++M+  G + D+ T TS L+AC  L  +  G Q+H  ++     +    ++  +
Sbjct: 236 EALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK----FDQDLILNNA 291

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KCG L +A   F  + +K VISWS+++ G AQ     +A+ELF  ++E   + +
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
              +  ++   +   LVE+G   +  + K   G+D    +   ++D+  + G +DEA +L
Sbjct: 352 YITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKL 410

Query: 375 FNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +EM  + + VTW  ++     H     A+   +K++  ++EP+      +LS
Sbjct: 411 IHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKII--ELEPEDAGTYILLS 461



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 8/191 (4%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M R  F  ++++  L   LR C+   LL+ G Q+H  ++K  F  DL+LNN LIDMY KC
Sbjct: 244 MKRAGF--LADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKC 299

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A + F +M+E++V+SW+ ++ G  QNG ++  L LF  M  S  +PN  T+   +
Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL 359

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK- 177
            A      VE G   +   MK  F  +P   +   +ID+  + GR++EA ++   M  + 
Sbjct: 360 FACSHAGLVEKGW-YYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEP 418

Query: 178 SLITWNAMIAG 188
             +TW  ++  
Sbjct: 419 DSVTWRTLLGA 429



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 32/275 (11%)

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
            +  + +L  AM     +    +  D    S ++   +    V++GK++H +        
Sbjct: 29  NFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEP 88

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
              V N++++MY+K  L++EA +LF+EMP +NVV+WT +I+ Y  + L  +A+     M 
Sbjct: 89  KMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMF 147

Query: 411 LDDVEPDGVAYLAVLSACS--------HSGLVEESQE--------------YFSRLCN-- 446
            + V P+   Y +VL AC         H G+++   E               +S L N  
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL 207

Query: 447 ---DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL---LSACRVHG 500
              D+     +  ++ I+    +    +EA NL + M     +A   TL   L AC    
Sbjct: 208 GVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLA 267

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            LELGR+V   +L+ D D  +N  ++ +++   GS
Sbjct: 268 LLELGRQVHVHVLKFDQDLILNNALI-DMYCKCGS 301


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/675 (33%), Positives = 365/675 (54%), Gaps = 9/675 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ + L+  G  +H   V  G    + L N L++MY+  G+++ A ++F  M  R+V+SW
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 82  TALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
             ++  ++Q+ +    L    Q+  +    PN  T S+ + A     ++ NG  IH M +
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           +   +   ++GNS++ MYSKC  + +  R+F+ MP   +++ N +  GY         + 
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMR 435

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG-GTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +F  M+  G  P+  T  +    C SLG +   G  +H ++  +G        I  SL+ 
Sbjct: 436 VFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL--SDEYITNSLIT 493

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y  CG L  +  +F  I  KSVISW+++I    +     EA++LF   +    ++D F 
Sbjct: 494 MYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFC 553

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           L+  +   A+ A +E+G Q+H  + K     D+ V N+ +DMY KCG +D   +   +  
Sbjct: 554 LAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPA 613

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            +    W  +I+GY ++G  KEA   F+ M+    +PD V ++A+LSACSH+GL+++  +
Sbjct: 614 HRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           Y++ +     + P I+H  CIVD LGR G+  EA+  I+ MPV P+  IW++LLS+ R H
Sbjct: 674 YYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTH 733

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            +L++GR+  + LL LD  +   YV++SN++A    W + ++LR   ++  L K    SW
Sbjct: 734 KNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSW 793

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           +++  E+  F  GD +H   EKI+  L E+  +++ E+G+V     ALHD  EE KE +L
Sbjct: 794 LKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLR-EVGYVADTSSALHDTDEEQKEHNL 852

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLA+   L    L    G  IR+FKNLRVC DCH   K +S +     V+RD  R
Sbjct: 853 WNHSEKLALAYGL----LVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908

Query: 680 FHRFEGGVCSCGDYW 694
           FH+F+ G CSC D+W
Sbjct: 909 FHQFKHGSCSCSDFW 923



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 191/408 (46%), Gaps = 13/408 (3%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H    + G   ++ +   L+ +Y   G +  A  +F +M +RNVVSWTA+M     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L  + +M    V  N   L+T +   G L     G+Q+    + SG   +  V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            NS+I M+    R+ +A R+FD M  +  I+WNAMI+ Y       K  ++   M+ HGE
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR-HGE 241

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           + PD  T  S +  C S   V  G+ IH   ++SG   SV  + A  LV+ Y   G L E
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA--LVNMYSTAGKLDE 299

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD-----GFVLSSMM 324
           A  +F  + ++ VISW+++I  Y Q  +  EA+E   QL    LQ D         SS +
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL----LQTDEGPPNSMTFSSAL 355

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
           G  +    +  G+ IHA   +        + NS++ MY KC  +++   +F  MP  +VV
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVV 415

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
           +  V+  GY        A+ +F  M    ++P+ +  + +   C   G
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 157/327 (48%), Gaps = 11/327 (3%)

Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG- 232
           MP ++  +W   ++G    G       L R M+E       F   S + AC   G   G 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 233 --GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G  IH     +G   +V   I  +L+  Y   G ++ A+R+F  + Q++V+SW+++++
Sbjct: 61  ACGAAIHALTHRAGLMGNV--YIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMV 118

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
             +    + EA+  +R++R+  +  +   L++++ +         G Q+ A+   V SGL
Sbjct: 119 ALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHV--VVSGL 176

Query: 351 DT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
            T  SV+NS++ M+     + +A  LF+ M  ++ ++W  +I+ Y    +  +   +   
Sbjct: 177 LTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSD 236

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M   +V+PD     +++S C+ S LV       S LC    +   +   + +V+    AG
Sbjct: 237 MRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHS-LCVSSGLHCSVPLINALVNMYSTAG 295

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +LDEA++L  +M  +  I+ W T++S+
Sbjct: 296 KLDEAESLFRNMSRRDVIS-WNTMISS 321



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 4/180 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  LA+ L   +    L+ G+QLHG  VK G   D  + N  +DMY KCG+M+      
Sbjct: 550 DRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTL 609

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
                R    W  L+ G+ + G  K     F  M S   KP+  T    + A      ++
Sbjct: 610 PDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLID 669

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIA 187
            GM  +   M   F  +P + +   I+D+  + G+  EA +  D MP   + + W ++++
Sbjct: 670 KGMDYYN-SMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/650 (34%), Positives = 354/650 (54%), Gaps = 49/650 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I    +CG+++ A  +FD+M ER+VVSWTA++ G  + G       LFCQM 
Sbjct: 96  DVVSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMP 155

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              +                                    WN +V       Y + G+++
Sbjct: 156 VKDIAA----------------------------------WNAMVHG-----YLQFGKVD 176

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A ++F  MP K++I+W  MI G      S + L LF+ M          TFT  + AC 
Sbjct: 177 DALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACA 236

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +  +   GTQ+HGF+I SGF Y  +  +  SL+  Y  C    ++R+VF  +  + V  W
Sbjct: 237 NAPAFHMGTQVHGFIIKSGFLY--EEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVW 294

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++L+ GY+      +A+ +F ++   S+  +    +S +   +    ++ GK+IH  A K
Sbjct: 295 TALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVK 354

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +  G    V NS+V MY   G +++A  +F E+  K++V+W  II G  +HG  K A  +
Sbjct: 355 LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND-KRMKPRIEHYSCIVDSL 464
           F +M+  + EPD + +  +LSACSH G +++ ++ F  + +    +  +I+HY+C+VD L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDIL 474

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GR G L EA+ LIESM VKP+  +W  LLSACR+H D++ G +    +  LD  +   YV
Sbjct: 475 GRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           ++SNI+A AG W+   +LR   + KG+ K  G SWV +  + H F+ GD  H L  +I +
Sbjct: 535 LLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCL--RIFE 592

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
            L  + +++K ELG+V   + ALHD+++E KEE L  HSE+LAI   L+    N   G  
Sbjct: 593 KLEFLREKLK-ELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLI----NTVEGST 647

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           + V KNLRVC DCH  IK +S+++    V+RD TRFH F+ G+CSCGDYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 146/270 (54%), Gaps = 3/270 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+       G Q+HG ++K GF ++  +   LI +YA C     +  VF +M+   V  W
Sbjct: 235 CANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVW 294

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TAL+ G+  N   +  L++F +M  +S+ PN+ T ++ + +   L +++ G +IHG+ +K
Sbjct: 295 TALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVK 354

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G      VGNS++ MYS  G +N+A  +F  +  KS+++WN++I G    G      ++
Sbjct: 355 LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDF 260
           F +M    + PDE TFT  L AC   G +  G ++  + I+SG  +  + +   + +VD 
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLF-YYISSGLNHIDRKIQHYTCMVDI 473

Query: 261 YVKCGCLVEARRVFD-LIEQKSVISWSSLI 289
             +CG L EA ++ + ++ + + + W +L+
Sbjct: 474 LGRCGELKEAEKLIESMVVKPNEMVWLALL 503



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 174/374 (46%), Gaps = 53/374 (14%)

Query: 163 RINEAARMFDV-------------------------------MPAKSLITWNAMIAGYVL 191
           R++EA  +FD                                MP + +++WN+MI+G V 
Sbjct: 50  RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVE 109

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  D  + +F +M E   +    ++T+ +  C   G V    ++   +        VK 
Sbjct: 110 CGDIDTAVKMFDEMPERSVV----SWTAMVNGCFRFGMVDQAERLFCQM-------PVKD 158

Query: 252 VIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + A  ++V  Y++ G + +A ++F  + +K+VISW+++I G  Q E   EA+ LF+ +  
Sbjct: 159 IAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLR 218

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++      + ++   A+      G Q+H +  K     +  V+ S++ +Y  C   ++
Sbjct: 219 CCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTED 278

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           + ++F EM  + V  WT +++GY  +   ++A+ +F +M+ + + P+   + + L++CS 
Sbjct: 279 SRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSA 338

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSI 486
            G ++  +E      +   +K  +   + + +SL      +G +++A ++   +  K SI
Sbjct: 339 LGTLDWGKEI-----HGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEI-FKKSI 392

Query: 487 AIWQTLLSACRVHG 500
             W +++  C  HG
Sbjct: 393 VSWNSIIVGCAQHG 406



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 156/334 (46%), Gaps = 67/334 (20%)

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL------------- 313
           L EAR VFD +    V  ++ +I GY +   L +A+ LF ++  R +             
Sbjct: 51  LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVEC 110

Query: 314 -QVDGFV-------------LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
             +D  V              ++M+     F +V+Q +++     ++P   D +  N++V
Sbjct: 111 GDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLF---CQMPVK-DIAAWNAMV 166

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             YL+ G +D+A +LF +MP KNV++WT +I G  ++  + EA+ LF+ ML   ++    
Sbjct: 167 HGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSR 226

Query: 420 AYLAVLSACSHS----------GLVEES----QEYFS----------RLCNDKR------ 449
            +  V++AC+++          G + +S    +EY +          +   D R      
Sbjct: 227 TFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEM 286

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGR 506
           +  ++  ++ ++       + ++A N+   M    + P+ + + + L++C   G L+ G+
Sbjct: 287 VHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGK 346

Query: 507 EVGEILLRLDGDNPVNYVMMSNI--HADAGSWNE 538
           E+  + ++L G   V +V  S +  ++D+G+ N+
Sbjct: 347 EIHGVAVKL-GLGTVAFVGNSLVVMYSDSGNVND 379



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 5/196 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S++  +   A  L  CS    LD+G ++HG  VK+G      + N L+ MY+  G +N A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDA 380

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +VF ++ ++++VSW +++ G  Q+G  K    +F QM   + +P+E T +  + A    
Sbjct: 381 VSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440

Query: 127 SSVENGMQIHGMCMKSGF---EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITW 182
             ++ G ++    + SG    +        ++D+  +CG + EA ++ + M  K + + W
Sbjct: 441 GFLQKGRKLFYY-ISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVW 499

Query: 183 NAMIAGYVLAGYSDKG 198
            A+++   +    D+G
Sbjct: 500 LALLSACRMHSDVDRG 515



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 25/205 (12%)

Query: 327 FADFAL--VEQGKQIHAYAAKVP-SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           F  F++  V  GK   +Y+  V     +  + N +++  L     DEA E+F+++P  +V
Sbjct: 12  FRAFSMSHVIHGKSFRSYSVTVEFQNREVLICNHLLNRRL-----DEAREVFDQVPSPHV 66

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
             +T +I+GY +     +A+ LF +M L DV    V++ +++S C   G ++ + + F  
Sbjct: 67  SLYTKMISGYTRSNRLVDALNLFDEMPLRDV----VSWNSMISGCVECGDIDTAVKMF-- 120

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
              D+  +  +  ++ +V+   R G +D+A+ L   MPVK  IA W  +     VHG L+
Sbjct: 121 ---DEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVK-DIAAWNAM-----VHGYLQ 171

Query: 504 LGR--EVGEILLRLDGDNPVNYVMM 526
            G+  +  ++  ++   N +++  M
Sbjct: 172 FGKVDDALKLFKQMPRKNVISWTTM 196


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/571 (35%), Positives = 333/571 (58%), Gaps = 2/571 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A   R C+       G QLH   +K  F  D+++    +DMYAKC  M+ A  +F  + +
Sbjct: 262 ASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPD 321

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N+ S+ A++ G+ +N        LF Q+  +S   +E +LS  + A+ V+     G+Q+
Sbjct: 322 HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +KS    N  V N+I+DMY KCG + EA+ +FD M  +  ++WNA+I         
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L  F  M      PDEFT+ S LKAC    +   G ++HG +I SG    +K  +  
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGM--GLKMFVGS 499

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LVD Y KCG + EA ++   +E+++++SW+++I G++ ++   ++   F  + E  ++ 
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEP 559

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F  ++++   A+ A V  GKQIHA   K+    D  +++++VDMY KCG + ++  +F
Sbjct: 560 DNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMF 619

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + P ++ VTW  +I G+  HGL +EA+ LF  ML ++++P+   +++VL ACSH G  +
Sbjct: 620 RKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAK 679

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF ++ +   ++P++EHYSC+VD LGR+G+++EA  LI+ MP +    IW+TLLS 
Sbjct: 680 KGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSI 739

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++ G++E+  +    LL+LD ++   Y ++SNI+ADAG W +  ++R+  RS  LKK  
Sbjct: 740 CKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEP 799

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           G SW+EV  E+H F   D  HP  E I+ +L
Sbjct: 800 GCSWIEVKDEVHTFLVCDKAHPKCEMIYSLL 830



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 264/511 (51%), Gaps = 11/511 (2%)

Query: 11  ERQRLADSLRCCSKNLLLD--YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           +   LA SL+ CS  LL D   G+Q+HG  V+MGF +D++  + L+DMYAKC  +  +  
Sbjct: 156 DHTTLAVSLKICS--LLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLD 213

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VF ++ ++N +SW+A + G +QN      L LF +M    +  ++ T ++  ++   LS+
Sbjct: 214 VFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSA 273

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G Q+H   +K+ F  + +VG + +DMY+KC  +++A ++F ++P  +L ++NAMI G
Sbjct: 274 SRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIG 333

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y       +   LF ++Q++    DE + +  L A   +     G Q+HG  I S    S
Sbjct: 334 YARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNL--S 391

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +A +++D Y KCG LVEA  +FD +E +  +SW+++I    Q E+  + +  F  +
Sbjct: 392 SNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAM 451

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++ D F   S++   A       G ++H    K   GL   V +++VDMY KCG++
Sbjct: 452 LRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMM 511

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           +EA ++   +  + +V+W  II+G+     ++++   F  ML   VEPD   Y  VL  C
Sbjct: 512 EEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTC 571

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           ++   V   ++  +++   + +   +   S +VD   + G + ++  +    P + S+  
Sbjct: 572 ANLATVGLGKQIHAQMIKLELLSD-VYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVT- 629

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           W  ++     HG   LG E  E+   +  +N
Sbjct: 630 WNAMICGFAYHG---LGEEALELFEHMLHEN 657



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 274/545 (50%), Gaps = 37/545 (6%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R+  +   + CS    L  G + H  ++  GF+  + + N LI MY KC  +  A  VF+
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 72  KMLERN--------------------------------VVSWTALMCGFLQNGNAKACLS 99
           +M +R+                                VVSW +L+ G+LQNG+ +  ++
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           +F +M    V  +  TL+ ++K   +L     G+QIHG+ ++ GF+++ V G++++DMY+
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           KC  + ++  +F  +P K+ I+W+A IAG V      +GL LF++MQ  G    + T+ S
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
             ++C  L +   GTQ+H   + + F   V  ++  + +D Y KC  + +A ++F L+  
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDV--IVGTATLDMYAKCDNMSDAYKLFSLLPD 321

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
            ++ S++++I+GYA+ E   +A +LF QL++ S   D   LS  +   A      +G Q+
Sbjct: 322 HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H  A K     +  V+N+I+DMY KCG + EA+ LF+EM +++ V+W  IIT   ++   
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
            + +  F  ML   +EPD   Y +VL AC+         E   R+     M  ++   S 
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSG-MGLKMFVGSA 500

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           +VD   + G ++EA+ +   +  +  ++ W  ++S   +    E  +     +L + G  
Sbjct: 501 LVDMYSKCGMMEEAEKIHYRLEEQTMVS-WNAIISGFSLQKKSEDSQRFFSHMLEM-GVE 558

Query: 520 PVNYV 524
           P N+ 
Sbjct: 559 PDNFT 563


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/675 (33%), Positives = 367/675 (54%), Gaps = 54/675 (8%)

Query: 23  SKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           ++N   D+ +QL   + VK     D++  N +I     C ++  A  +FD+M ER+VVSW
Sbjct: 53  ARNYRFDHALQLFYEMPVK-----DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSW 107

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T ++ GFLQ G  +    LF +M    +                                
Sbjct: 108 TTMINGFLQFGKIEVAEGLFYKMPFRDIAA------------------------------ 137

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
               WN     S+I  Y   GR+ +  R+F  MP +++I+W +MI G    G S++ L L
Sbjct: 138 ----WN-----SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGL 188

Query: 202 FRKMQEHG-EI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           FR+M   G E+ P   T+   + AC +  ++  G QIH  +   G  YS    I+ +L+ 
Sbjct: 189 FRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLG--YSFDAYISAALIT 246

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
           FY  C  + ++ RVF      +V+ W++L+ GY       +A+++F ++    +  +   
Sbjct: 247 FYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSS 306

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +S +        ++ G++IH  A K+    D  V NS++ MY +CG +++   +F  + 
Sbjct: 307 FTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS 366

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            KN+V+W  +I G  +HG    A+  F +M+   VEPD + +  +LSACSHSG+ ++ + 
Sbjct: 367 KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC 426

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            F     +K  + +++HY+C+VD LGR+G+L+EA+ LI +MPVK +  +W  LLSAC +H
Sbjct: 427 LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
             LE+     + ++ L+      YV++SN++A A  W++  R+R+  + +G+ K  GRSW
Sbjct: 487 SKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSW 546

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           + +    + F  GD +HP +++I+Q L  +  ++K ELG+V   ++ALHD+++E KE  L
Sbjct: 547 ITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLK-ELGYVPDQRFALHDVEDEQKEVML 605

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSE+LAIG  L+    +   G  I V KNLRVCGDCH  IK ++KI++   +VRD+TR
Sbjct: 606 SYHSERLAIGFGLI----STVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTR 661

Query: 680 FHRFEGGVCSCGDYW 694
           FH F  G CSCGDYW
Sbjct: 662 FHHFMDGRCSCGDYW 676


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/687 (32%), Positives = 373/687 (54%), Gaps = 24/687 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           L+CC++   LD G   H A +++G +  D+   N L+  YA+ G ++ A  VFD M  R+
Sbjct: 115 LKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARD 174

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           VV+W +++ G++ NG     L  F +M  +  V+ +   +   + A  + S++  G ++H
Sbjct: 175 VVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVH 234

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              ++ G E +  VG SI+DMY KCG I  A  +F  MP+++++TWN MI GY L    +
Sbjct: 235 AYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPE 294

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           +    F +M+  G   +  T  + L AC    S   G  +HG++    F   V  V+  +
Sbjct: 295 EAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHV--VLETA 352

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L++ Y K G +  + +VF  +  K+++SW+++I  Y  +E   EA+ LF  L  + L  D
Sbjct: 353 LLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPD 412

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F +S+++  F    L+ Q +Q+H+Y  ++  G +T + N+I+ MY +CG +  + E+F+
Sbjct: 413 YFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFD 472

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +M  K+V++W  +I GY  HG  + A+ +F +M  + + P+   +++VL+ACS SGL +E
Sbjct: 473 KMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDE 532

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
               F+ +  D  M P+IEHY C+ D LGRAG L E    IE+MP+ P+  +W +LL+A 
Sbjct: 533 GWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTAS 592

Query: 497 RVHGDLELGREVGEILLRLDG-----DNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           R   D+++     E + +L+      DN   YV++S+++ADAG W + ER++ L   KGL
Sbjct: 593 RNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGL 652

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           ++   RS VE+      F  GD THP ++ I +V             F+ G    + D  
Sbjct: 653 RRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEV-----------SNFLSGKIGEMRDPM 701

Query: 612 EESKEESL----RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            +S   SL         K ++ LA+V G ++ +    I V KN+R+C DCH  +K +SK 
Sbjct: 702 NQSDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKY 761

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                VV D   +H+F  G C CGDYW
Sbjct: 762 SGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 170/353 (48%), Gaps = 12/353 (3%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P    S++  ++  GR+++A        ++     N +I G   AG     L  +  M  
Sbjct: 42  PGGTKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLA 101

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD FTF   LK C  LG++  G   H   I  G   +       SL+ FY + G +
Sbjct: 102 AGARPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVA-AADVYTGNSLLAFYARLGLV 160

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGF-VLSSMMG 325
            +A RVFD +  + V++W+S++ GY        A+  FR++ E   +Q DG  +++++  
Sbjct: 161 DDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAA 220

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
              + AL+ QG+++HAY  +     D  V  SI+DMY KCG I  A  +F  MP + VVT
Sbjct: 221 CCLESALM-QGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVT 279

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEES-QEYFS 442
           W  +I GY  +   +EA   F +M  +  + + V  + +L+AC+   S L   S   Y +
Sbjct: 280 WNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYIT 339

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           R    ++  P +   + +++   + G++  ++ +   M  K ++  W  +++A
Sbjct: 340 R----RQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTK-TLVSWNNMIAA 387


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/569 (36%), Positives = 337/569 (59%), Gaps = 8/569 (1%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +SV     IH   +KS    +  +G+ ++ MY K G   +A R+FD MP + L++WN+++
Sbjct: 153 TSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLM 212

Query: 187 AGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           +G    GY    L  F +M+ E G  P+E T  S + AC  +G++  G  +HG ++  G 
Sbjct: 213 SGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGM 272

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S K  +  SL++ Y K G L  A ++F+ +  +S++SW+S+++ +       + M+LF
Sbjct: 273 --SGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 330

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             ++   +  D   + +++    D  L  Q + IHAY  +     D  ++ +++++Y K 
Sbjct: 331 NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 390

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G ++ + ++F E+  ++ + WT ++ GY  H   +EA+ LF  M+ + VE D V +  +L
Sbjct: 391 GRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 450

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACSHSGLVEE ++YF  +    R++PR++HYSC+VD LGR+GRL++A  LI+SMP++PS
Sbjct: 451 SACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPS 510

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             +W  LL ACRV+G++ELG+EV E LL LD  +  NY+M+SNI++ AG W    ++R L
Sbjct: 511 SGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXL 570

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            + + L +  G S++E   +IH F  GD  HP +++IH  L E+ +++ E  G     ++
Sbjct: 571 MKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEA-GCAPKTEF 629

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHDI EE K + +  HSEKLAI   L+  G     G  + + KNLR+CGDCH   K  S
Sbjct: 630 VLHDIDEEVKVDMINKHSEKLAIAFGLLVTG----SGVPLIITKNLRICGDCHSTAKFAS 685

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + K   ++RD+ RFH F  G+CSC DYW
Sbjct: 686 LLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 213/397 (53%), Gaps = 15/397 (3%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           Q L  ++  C+    + Y   +H  ++K     D  + + L+ MY K G    A  +FD+
Sbjct: 143 QSLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDE 199

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVEN 131
           M  R++VSW +LM G    G   ACL+ FC+M + S  +PNE TL + + A   + +++ 
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  +HG+ +K G      V NS+I+MY K G ++ A+++F+ MP +SL++WN+M+  +  
Sbjct: 260 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 319

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            GY++KG+ LF  M+  G  PD+ T  + L+AC   G       IH ++   GF  +   
Sbjct: 320 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGF--NADI 377

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +IA +L++ Y K G L  +  +F+ I+ +  I+W++++ GYA      EA++LF  + + 
Sbjct: 378 IIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKE 437

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            ++VD    + ++   +   LVE+GK   +I +   +V   LD    + +VD+  + G +
Sbjct: 438 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMVDLLGRSGRL 495

Query: 369 DEATELFNEMPVK-NVVTWTVIITG---YGKHGLAKE 401
           ++A EL   MP++ +   W  ++     YG   L KE
Sbjct: 496 EDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKE 532



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 7/239 (2%)

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           +L   SL  D  V  S++   +    V     IHA   K  +  D  + + +V MY K G
Sbjct: 130 KLHNSSLLADSIV-QSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG 188

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVL 425
             ++A  LF+EMP +++V+W  +++G    G     +  F +M  +   +P+ V  L+V+
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SAC+  G ++E +     +     M  + +  + +++  G+ G LD A  L E MPV+ S
Sbjct: 249 SACAXMGALDEGKSLHGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-S 306

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA--DAGSWNECERL 542
           +  W +++     +G  E G ++  ++ R  G NP    M++ + A  D G   + E +
Sbjct: 307 LVSWNSMVVIHNHNGYAEKGMDLFNLMKRA-GINPDQATMVALLRACTDTGLGRQAESI 364


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 342/602 (56%), Gaps = 10/602 (1%)

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           A A L     + +  + P      T I A     ++E+  ++H     S F  +  + NS
Sbjct: 32  ASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           +I +Y KCG + EA ++FD M  K +++W ++IAGY      ++ + L   M +    P+
Sbjct: 92  LIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPN 151

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            FTF S LKA G+    G G QIH   +   +   V   +  +L+D Y +CG +  A  V
Sbjct: 152 GFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDV--YVGSALLDMYARCGMMDMATAV 209

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           FD ++ K+ +SW++LI G+A++ +   A+  F ++     +   F  SS+    A    +
Sbjct: 210 FDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGAL 269

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           EQGK +HA+  K    +     N+++DMY K G + +A ++F+ +  K++VTW  ++T +
Sbjct: 270 EQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAF 329

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            ++GL KEAV  F +M    +  + V +L +L+ACSH GLV+E + YF  +  +  ++P 
Sbjct: 330 AQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPE 388

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           I+H+  +V  LGRAG L+ A   I  MP++P+ A+W  LL+ACR+H + ++G+   + + 
Sbjct: 389 IDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVF 448

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            LD D+    V++ NI+A  G W+   R+R++ ++ G+KK    SWVE++  +H F   D
Sbjct: 449 ELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVAND 508

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
           DTHP  E+I+++  ++ K++++E G+V  + Y L  + ++ +E +L+ HSEKLA+  AL+
Sbjct: 509 DTHPRAEEIYKMWGQISKKIRKE-GYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALI 567

Query: 634 RGGLNEQP-GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
                E P G  IR+ KN+R+CGDCH   K +SK+     VVRD  RFH F  G CSC D
Sbjct: 568 -----EMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCAD 622

Query: 693 YW 694
           YW
Sbjct: 623 YW 624



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 215/401 (53%), Gaps = 7/401 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+++  L+   ++H  L    F+ D  L+N LI +Y KCG +  A  VFD+M  +++
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+L+ G+ QN   +  + L   M     KPN FT ++ +KA+G  +    G QIH +
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHAL 177

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K  +  +  VG++++DMY++CG ++ A  +FD + +K+ ++WNA+I+G+   G  +  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-SL 257
           L+ F +M  +G     FT++S   +   LG++  G  +H  +I S       T  AG +L
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKS---RQKMTAFAGNTL 294

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y K G +++AR+VFD ++ K +++W++++  +AQ     EA+  F ++R+  + ++ 
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQ 354

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
                ++   +   LV++GK+      +     +     ++V +  + GL++ A     +
Sbjct: 355 VTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414

Query: 378 MPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           MP++     W  ++     H  AK  VG F    + +++PD
Sbjct: 415 MPIEPTAAVWGALLAACRMHKNAK--VGQFAADHVFELDPD 453


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/644 (33%), Positives = 350/644 (54%), Gaps = 9/644 (1%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           ++  Y++ G +      FD+M   ++VSW AL+  ++ N +   C   F  M    + P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           E  +S  + A      +  G  I    + +G E   +V  +++ MY K G   +AA +F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            M  + ++ W+AM+A Y   G+  + L LFR+M   G  P++ T  S L AC SLG +  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  +H  +   G    V  V+  +LV+ Y KCG +  A   F  I +K+V++WS++   Y
Sbjct: 181 GALMHQRVEAQGIQSGV--VVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAY 238

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL-- 350
           A+ +   +A+ +  ++    L  +     S++   A  A ++QG++IH     +  GL  
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D  V  ++V+MY KCG +  A ++F+++   ++V W  +I    +HG  ++A+ LF +M 
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMR 358

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
           L+ ++P  + + +VL ACSH+G++++ +++F     D  + P  EH+ C+VD LGRAG +
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
            ++++L+  MP +P    W   L ACR + +++      E L +LD      YV++SN++
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMY 478

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           A AG W++  R+R+  +     K AGRSW+EV   +H F  GD  HP   +IH  L  + 
Sbjct: 479 AKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT 538

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
           K MKE  G+V   +  LHD+++E KE  +  HSEKLA+  AL    L    G  IRV KN
Sbjct: 539 KLMKEA-GYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFAL----LTTPEGSPIRVVKN 593

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LRVC DCH   K +SK++    VVRD  RFHRF+ G CSCGDYW
Sbjct: 594 LRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 15/336 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L  G  +H  +   G    +++   L+++Y KCG +  A   F +++
Sbjct: 165 LVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIV 224

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NVV+W+A+   + +N   +  + +  +M    + PN  T  + + A   +++++ G +
Sbjct: 225 EKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRR 284

Query: 135 IH--GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           IH     +  G E +  V  ++++MYSKCG +  A  MFD +    L+ WN++IA     
Sbjct: 285 IHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQH 344

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSG-FPYSVK 250
           G ++K L LF +M+  G  P   TFTS L AC   G +  G +    F+   G FP +  
Sbjct: 345 GQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEH 404

Query: 251 TVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAM---ELFR 306
               G +VD   + G +V++   +  +  +   ++W + +       N+  A+   E   
Sbjct: 405 F---GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLF 461

Query: 307 QLRERSLQVDGFVLSSM---MGVFADFALVEQGKQI 339
           QL  R  +    +LS+M    G ++D A + Q  Q+
Sbjct: 462 QLDPRK-RAPYVLLSNMYAKAGRWSDVARMRQAMQL 496


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/619 (35%), Positives = 350/619 (56%), Gaps = 21/619 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+    + GN K  + L C        P + T    I +    +S+ +G+ +H   + SG
Sbjct: 53  LIQSLCKGGNLKQAIHLLC----CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSG 108

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +P +   +I+MY + G I+ A ++FD    +++  WNA+     + G   + L L+ 
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYV 168

Query: 204 KMQEHGEIPDEFTFTSTLKACG----SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +M   G   D FT+T  LKAC     S+  +  G +IH  ++  G+  ++   +  +L+D
Sbjct: 169 QMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIH--VMTTLLD 226

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR--QLRERSLQVDG 317
            Y K G +  A  VF  +  K+ +SWS++I  +A+ E   +A+ELF+   L       + 
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNS 286

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELF 375
             + +++   A  A +EQGK IH Y  +   GLD+   V N+++ MY +CG I     +F
Sbjct: 287 VTMVNVLQACAGLAALEQGKLIHGYILR--RGLDSILPVLNALITMYGRCGEILMGQRVF 344

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  ++VV+W  +I+ YG HG  K+A+ +F  M+     P  ++++ VL ACSH+GLVE
Sbjct: 345 DNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E +  F  + +  R+ P +EHY+C+VD LGRA RLDEA  LIE M  +P   +W +LL +
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+H ++EL      +L  L+  N  NYV++++I+A+A  W+E + + KL  ++GL+K+ 
Sbjct: 465 CRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLP 524

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EV ++++ F   D+ +P  E+IH +L+++   MK + G+V      L+D+ EE K
Sbjct: 525 GCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQ-GYVPQTNVVLYDLDEEEK 583

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  +  HSEKLA+   L+    N   G+ IR+ KNLR+C DCH   K +SK      +VR
Sbjct: 584 ERIVLGHSEKLAVAFGLI----NTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVR 639

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F+ GVCSCGDYW
Sbjct: 640 DVNRFHHFKDGVCSCGDYW 658



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 193/376 (51%), Gaps = 14/376 (3%)

Query: 13  QRLADSLRC-CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           QR  + L C C++   L  G+ +H  LV  GF  D  L   LI+MY + G ++ A  VFD
Sbjct: 78  QRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFD 137

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV----LS 127
           +  ER +  W AL       G  K  L L+ QM    +  + FT +  +KA  V    +S
Sbjct: 138 ETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVS 197

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            ++ G +IH   ++ G+E N  V  +++D+Y+K G ++ A  +F  MP K+ ++W+AMIA
Sbjct: 198 PLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIA 257

Query: 188 GYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            +       K L LF+ M  + H  +P+  T  + L+AC  L ++  G  IHG+++  G 
Sbjct: 258 CFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGL 317

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S+  V+  +L+  Y +CG ++  +RVFD ++ + V+SW+SLI  Y       +A+++F
Sbjct: 318 D-SILPVL-NALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA---YAAKVPSGLDTSVSNSIVDMY 362
             +  +          +++G  +   LVE+GK +        ++  G++      +VD+ 
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA--CMVDLL 433

Query: 363 LKCGLIDEATELFNEM 378
            +   +DEA +L  +M
Sbjct: 434 GRANRLDEAIKLIEDM 449



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 160/356 (44%), Gaps = 45/356 (12%)

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N +I    K G + +A  +    P                                   
Sbjct: 50  NNQLIQSLCKGGNLKQAIHLLCCEPN---------------------------------- 75

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P + TF   + +C    S+  G  +H  L++SGF       +A  L++ Y + G +  A
Sbjct: 76  -PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGF--DQDPFLATKLINMYYELGSIDRA 132

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG--VFA 328
           R+VFD   ++++  W++L    A      E ++L+ Q+    +  D F  + ++   V +
Sbjct: 133 RKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVS 192

Query: 329 DFAL--VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
           + ++  +++GK+IHA+  +     +  V  +++D+Y K G +  A  +F  MP KN V+W
Sbjct: 193 ELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLD--DVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           + +I  + K+ +  +A+ LF+ M+L+  D  P+ V  + VL AC+    +E+ +     +
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYI 312

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              + +   +   + ++   GR G +   + + ++M  +  ++ W +L+S   +HG
Sbjct: 313 LR-RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVS-WNSLISIYGMHG 366


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/617 (36%), Positives = 344/617 (55%), Gaps = 23/617 (3%)

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           A  C FLQ       LSL+ QM     +PN FT    +K+   LS    G Q HG   K 
Sbjct: 25  AKRCQFLQ------ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKV 78

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMF--DVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           G  + P V   +I MY K   ++ A ++F  +    K  + +NA+++GYV      + +L
Sbjct: 79  GCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVL 138

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LFR+M E G   +  T    + AC S  ++  G+ +H   +  GF   V  V     +  
Sbjct: 139 LFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV--NCFITM 196

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y+KCG +  A+++FD +  K +ISW++++ GYAQ       +EL+R +    +  D   L
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
             ++   A+      G ++           +  ++N++++MY +CG + +A  +F+ MP 
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           + +V+WT II GYG HG  + AV LF++M+   +EPDG A++ VLSACSH+GL ++  EY
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +  + +++P  EHYSC+VD LGRAGRL EA+ LIESMP+KP  A+W  LL AC++H 
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           ++EL     E ++ L+ +N   YV++SNI+++A +     R+R + + K LKK  G S+V
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           E+   +H F  GD  H  +++I++VL E+E  + +E G          D +EES ++   
Sbjct: 497 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG------KPEKDNREESNKDGFT 550

Query: 621 ---VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
              VHSEKLA+   L    LN   G  + + KNLR+C DCH F K +SKI+     VRDA
Sbjct: 551 RVGVHSEKLAVAFGL----LNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDA 606

Query: 678 TRFHRFEGGVCSCGDYW 694
           TRFH F  G CSC DYW
Sbjct: 607 TRFHHFRNGSCSCKDYW 623



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 208/415 (50%), Gaps = 12/415 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C+   L   G Q HG + K+G  F+  +   LI MY K   ++ A  VF++     
Sbjct: 55  ALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSR 114

Query: 78  --VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
              V + AL+ G++ N      + LF QM    V  N  TL   I A     ++E G  +
Sbjct: 115 KLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSL 174

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   +K GF+ +  V N  I MY KCG +N A ++FD MP K LI+WNAM++GY   G +
Sbjct: 175 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 234

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              L L+R M  +G  PD  T    L +C +LG+   G ++   +  SGF  +    +  
Sbjct: 235 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGF--TSNPFLNN 292

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L++ Y +CG L +A+ VFD + +++++SW+++I GY    +   A++LF+++    ++ 
Sbjct: 293 ALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP 352

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           DG     ++   +   L +QG +      +   +  G +    + +VD+  + G + EA 
Sbjct: 353 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH--YSCMVDLLGRAGRLKEAQ 410

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            L   MP+K +   W  ++     H   + A   F +++  ++EP+ + Y  +LS
Sbjct: 411 TLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI--ELEPENIGYYVLLS 463



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 18/252 (7%)

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++ +   A+     +A+ L+ Q+     + + F     +   A  +L   G Q H    
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE--MPVKNVVTWTVIITGYGKHGLAKEA 402
           KV    +  V   ++ MY K  L+D A ++F E     K  V +  +++GY  +    EA
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           V LFR+M  + V  + V  L ++ AC S   L   S  + S L         +   +C +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL--KYGFDSDVSVVNCFI 194

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
               + G ++ A+ L + MPVK  I+ W  ++S    +G   L   V E+   +D     
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLIS-WNAMVSGYAQNG---LATNVLELYRNMD----- 245

Query: 522 NYVMMSNIHADA 533
               M+ +H D 
Sbjct: 246 ----MNGVHPDP 253


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/653 (34%), Positives = 363/653 (55%), Gaps = 61/653 (9%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ-NGNAKACLSLFCQM 104
           D++  N  I  + +  ++  A  VF+KM  R  V+W  ++ G+ +  G  K    LF ++
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 105 GSSSVKPNEFTLSTNIKASGVLSS--VENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKC 161
                 P   ++S NI     L S  VE  +   + M +K    WN     ++I  +++ 
Sbjct: 132 ------PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWN-----TLISGFAQN 180

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G++ +A  +F VMP K+ ++W+AMI+GYV                EHG+          L
Sbjct: 181 GQMQKAFDLFSVMPEKNGVSWSAMISGYV----------------EHGD----------L 214

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           +A   L    G   +               V+  +++  Y+K G +  A R+F  +  K+
Sbjct: 215 EAAEELYKNVGMKSV---------------VVETAMLTGYMKFGKVELAERIFQRMAVKN 259

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +++W+S+I GY +     + +++F+ + E  ++ +   LSS++   ++ + +  G+Q+H 
Sbjct: 260 LVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQ 319

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
             +K P   DT+   S++ MY KCG +D A +LF EMP K+V++W  +I+GY +HG  ++
Sbjct: 320 LVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRK 379

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF KM    ++PD + ++AV+ AC+H+G V+   +YF  +  +  ++ +  HY+C++
Sbjct: 380 ALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVI 439

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGRAGRLDEA +LI+ MP KP  AI+ TLL ACR+H +L+L       LL LD  +  
Sbjct: 440 DLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSAT 499

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            YV ++NI+A    W++  ++RK+ +   + K+ G SW+E+    H F   D  HP    
Sbjct: 500 GYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTS 559

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           IH+ L E++ +MK   G+V  +++ALHD++EE KE+ L  HSEKLAI   L++      P
Sbjct: 560 IHKKLNELDGKMKLA-GYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA----P 614

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G  IRVFKNLRVCGDCH  IK +S I K   +VRD TRFH F  G CSCGDYW
Sbjct: 615 GTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 172/357 (48%), Gaps = 44/357 (12%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  YGV+   A        D+   N LI  +A+ G+M  A  +F  M E+N VSW+A++ 
Sbjct: 147 LRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMIS 206

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G++++G+ +A   L+  +G  SV                                     
Sbjct: 207 GYVEHGDLEAAEELYKNVGMKSV------------------------------------- 229

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             VV  +++  Y K G++  A R+F  M  K+L+TWN+MIAGYV    ++ GL +F+ M 
Sbjct: 230 --VVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMI 287

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E    P+  + +S L  C +L ++  G Q+H  +  S  P S  T    SL+  Y KCG 
Sbjct: 288 ESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS--PLSKDTTACTSLISMYCKCGD 345

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A ++F  + +K VISW+++I GYAQ     +A+ LF ++R  +++ D     +++  
Sbjct: 346 LDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK 381
                 V+ G Q +  + K   G++    +   ++D+  + G +DEA  L  EMP K
Sbjct: 406 CNHAGFVDLGVQ-YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 5/180 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L  G Q+H  + K   S D      LI MY KCG+++ A  +F +M 
Sbjct: 298 LSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP 357

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++V+SW A++ G+ Q+G  +  L LF +M + ++KP+  T    I A      V+ G+Q
Sbjct: 358 RKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
               M  + G E  PV    +ID+  + GR++EA  +   MP K     +A I G +L  
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKP----HAAIYGTLLGA 473



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK-HGLAKEAVG 404
           V +  D    N  +  +++   ++ A  +F +M V+  VTW  +++GY K  G  KEA  
Sbjct: 67  VDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHE 126

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF K+     EPD V+Y  +L     S  VE +  +F+++         I  ++ ++   
Sbjct: 127 LFDKI----PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKD-----IASWNTLISGF 177

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + G++ +A +L   MP K  ++ W  ++S    HGDLE   E+
Sbjct: 178 AQNGQMQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLEAAEEL 220


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/582 (37%), Positives = 334/582 (57%), Gaps = 30/582 (5%)

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            I+A  + + ++N +QI    + S  + NP   +           ++ A ++F+ +P   
Sbjct: 44  QIQAFSIKTHLQNDLQILTKLINSCTQ-NPTTAS-----------MDYAHQLFEAIPQPD 91

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++ +N+M  GY  +    K + LF K   +  +PD++TF S LKAC    +   G Q+H 
Sbjct: 92  IVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHC 151

Query: 239 FLITSGF---PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
             I  G    PY     +  +L++ Y  C  +  A+RVFD I +  V+S++++I GYA+ 
Sbjct: 152 LAIKLGLNENPY-----VCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARS 206

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TS 353
               EA+ LFRQL+ R L+ +   + S++   A    ++ GK IH Y  K  +GLD    
Sbjct: 207 SRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKK--NGLDKYVK 264

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V+ +++DMY KCG +D A  +F  M V++   W+ +I  Y  HG  ++ + +F +M    
Sbjct: 265 VNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAK 324

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           V+PD + +L +L ACSH+GLV+E   YF  +     + P I+HY C+VD LGRAG L EA
Sbjct: 325 VQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEA 384

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
              I+ +P+KP+  +W+TLLS+C  HG+LEL ++V   +L LD  +  +YV++SN+ A A
Sbjct: 385 YKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARA 444

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G W + + LRKL   KG  K+ G S +EVD  +H F+ GD  H ++  +H+ L E+ K +
Sbjct: 445 GKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKEL 504

Query: 594 KEELGFVYGVKYALH-DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
           K  +G+V      +H D+++E KE +LR HSEKLAI   L    LN  PG  IRV KNLR
Sbjct: 505 K-SVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGL----LNTPPGTTIRVVKNLR 559

Query: 653 VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           VCGDCH   K +S ++    ++RD  RFH F+ G CSCGDYW
Sbjct: 560 VCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 215/425 (50%), Gaps = 12/425 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK---CGEMNGACAVFDKMLE 75
           L C  K   L    Q+    +K     DL +   LI+   +      M+ A  +F+ + +
Sbjct: 30  LSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQ 89

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            ++V + ++  G+ ++      +SLF +  + ++ P+++T  + +KA  V  + + G Q+
Sbjct: 90  PDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQL 149

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H + +K G   NP V  ++I+MY+ C  ++ A R+FD +    ++++NA+I GY  +   
Sbjct: 150 HCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRP 209

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++ L LFR++Q     P++ T  S L +C  LG++  G  IH ++  +G    VK  +  
Sbjct: 210 NEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVK--VNT 267

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KCG L  A  VF+ +  +   +WS++I+ YA      + M +F ++    +Q 
Sbjct: 268 ALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQP 327

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATE 373
           D      ++   +   LV++G + + Y+     G+   + +   +VD+  + GL+ EA +
Sbjct: 328 DEITFLGLLYACSHTGLVDEGFR-YFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYK 386

Query: 374 LFNEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS 431
             +E+P+K   + W  +++    HG  + A  +  ++L LDD    G  Y+ + + C+ +
Sbjct: 387 FIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSH--GGDYVILSNLCARA 444

Query: 432 GLVEE 436
           G  E+
Sbjct: 445 GKWED 449



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 20/371 (5%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           ++++L+ +       L+ C        G QLH   +K+G + +  +   LI+MYA C ++
Sbjct: 119 LNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDV 178

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           +GA  VFD++LE  VVS+ A++ G+ ++      LSLF Q+ +  +KPN+ T+ + + + 
Sbjct: 179 DGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSC 238

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
            +L +++ G  IH    K+G +    V  ++IDMY+KCG ++ A  +F+ M  +    W+
Sbjct: 239 ALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWS 298

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG-------TQI 236
           AMI  Y + G     + +F +M      PDE TF   L AC   G V  G       +++
Sbjct: 299 AMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEV 358

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV-ISWSSLILGYAQE 295
           +G  I  G  +       G +VD   + G L EA +  D +  K   I W +L+   +  
Sbjct: 359 YG--IIPGIKH------YGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSH 410

Query: 296 ENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQ--IHAYAAKVPSGLD 351
            NL  A ++  Q+ E   S   D  +LS++      +  V+  ++  IH  A K+P    
Sbjct: 411 GNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSS 470

Query: 352 TSVSNSIVDMY 362
             V N + + +
Sbjct: 471 IEVDNVVHEFF 481


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/601 (36%), Positives = 347/601 (57%), Gaps = 40/601 (6%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS--KCGRINEAARMFDVMPAKSLITWNA 184
           S++E   QIHG  +K+G   + +  + ++   +    G +  A  +FD +   +   WN 
Sbjct: 29  SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY  +   ++ LLL+  M  H    + +TF   LKAC S+ +     QIH  +I  G
Sbjct: 89  MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMG 148

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ---------- 294
           F   + T    SL++ Y K G +  AR +FD ++Q+  +SW+S+I GY +          
Sbjct: 149 FGSEIYTT--NSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEI 206

Query: 295 -----EENL----------------AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                E N+                 EA+ LF +++   +++D   L S +   AD  ++
Sbjct: 207 FNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           +QGK IHAY  K    +D  +   ++DMY KCG ++EA E+F +M  K V  WT +I+GY
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             HG  +EA+  F KM    VEP+ + +  +L+ACSH+GLV E++  F  +      KP 
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPS 386

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           IEHY C+VD LGRAG L EA+ LIE+MPVKP+ AIW  LL+AC +HG+LELG+++G+IL+
Sbjct: 387 IEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILI 446

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
           ++D  +   Y+ +++IHA AG WN+  R+R+  + +G+ K+ G S + V+   H F  GD
Sbjct: 447 QVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGD 506

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
           ++HP  ++I  +L ++ +R++EE G+   +   L D++++ KE ++  HSEKLA+   L+
Sbjct: 507 ESHPQIKEIDHMLEQIVERLREE-GYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLI 565

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
               + +PG  IR+ KNLRVC DCH  IK +SK+     ++RD TRFH F+ G C+CGDY
Sbjct: 566 ----STKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDY 621

Query: 694 W 694
           W
Sbjct: 622 W 622



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 181/401 (45%), Gaps = 39/401 (9%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+HG ++K G   D +  + L+   A    G +  A  VFD++   N   W  ++ G+  
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +   +  L L+  M   SV  N +T    +KA   +S+ E   QIH   +K GF      
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYT 155

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY--------------------- 189
            NS++++YSK G I  A  +FD +  +  ++WN+MI GY                     
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI 215

Query: 190 ----------VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
                     V AG   + L LF +MQ  G   D     STL+AC  LG +  G  IH +
Sbjct: 216 ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAY 275

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +        +  ++   L+D Y KCG L EA  VF  +E+K V  W+++I GYA      
Sbjct: 276 I--KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGR 333

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           EA+E F +++   ++ +    + ++   +   LV + K +     ++  G   S+ +   
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERI-HGFKPSIEHYGC 392

Query: 358 IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           +VD+  + GL+ EA EL   MPVK N   W  ++     HG
Sbjct: 393 MVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDL-----MLN----------------------- 50
           L+ CS     +   Q+H  ++KMGF  ++     +LN                       
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184

Query: 51  ---NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
              N +ID Y KCGE+  A  +F+ M ERN++SWT+++ G +  G  K  L+LF +M ++
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            +K +   L + ++A   L  ++ G  IH    K   E +P++G  +IDMY+KCG + EA
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 304

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F  M  K +  W AMI+GY + G   + L  F KMQ  G  P++ TFT  L AC   
Sbjct: 305 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 364

Query: 228 GSVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-W 285
           G V     +        GF  S++    G +VD   + G L EA  + + +  K   + W
Sbjct: 365 GLVHEAKLLFESMERIHGFKPSIEHY--GCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            +L+       NL    EL +Q+ +  +QVD
Sbjct: 423 GALLNACHIHGNL----ELGKQIGKILIQVD 449


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/675 (33%), Positives = 367/675 (54%), Gaps = 54/675 (8%)

Query: 23  SKNLLLDYGVQLHGAL-VKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           ++N   D+ +QL   + VK     D++  N +I     C ++  A  +FD+M ER+VVSW
Sbjct: 37  ARNYRFDHALQLFYEMPVK-----DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSW 91

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           T ++ GFLQ G  +    LF +M    +                                
Sbjct: 92  TTMINGFLQFGKIEVAEGLFYKMPFRDIAA------------------------------ 121

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
               WN     S+I  Y   GR+ +  R+F  MP +++I+W +MI G    G S++ L L
Sbjct: 122 ----WN-----SMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGL 172

Query: 202 FRKMQEHG-EI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           FR+M   G E+ P   T+   + AC +  ++  G QIH  +   G  YS    I+ +L+ 
Sbjct: 173 FRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLG--YSFDAYISAALIT 230

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
           FY  C  + ++ RVF      +V+ W++L+ GY       +A+++F ++    +  +   
Sbjct: 231 FYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSS 290

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            +S +        ++ G++IH  A K+    D  V NS++ MY +CG +++   +F  + 
Sbjct: 291 FTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS 350

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            KN+V+W  +I G  +HG    A+  F +M+   VEPD + +  +LSACSHSG+ ++ + 
Sbjct: 351 KKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRC 410

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            F     +K  + +++HY+C+VD LGR+G+L+EA+ LI +MPVK +  +W  LLSAC +H
Sbjct: 411 LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
             LE+     + ++ L+      YV++SN++A A  W++  R+R+  + +G+ K  GRSW
Sbjct: 471 SKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSW 530

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           + +    + F  GD +HP +++I+Q L  +  ++K ELG+V   ++ALHD+++E KE  L
Sbjct: 531 ITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLK-ELGYVPDQRFALHDVEDEQKEVML 589

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSE+LAIG  L+    +   G  I V KNLRVCGDCH  IK ++KI++   +VRD+TR
Sbjct: 590 SYHSERLAIGFGLI----STVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTR 645

Query: 680 FHRFEGGVCSCGDYW 694
           FH F  G CSCGDYW
Sbjct: 646 FHHFMDGRCSCGDYW 660



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+    L  GVQ+H  + K+G+SFD  ++  LI  YA C +M  +  VF   L  NVV W
Sbjct: 197 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 256

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TAL+ G+  N   +  L +F +M    V PN+ + ++ + +   L +++ G +IH   +K
Sbjct: 257 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 316

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
            G E +  VGNS+I MY +CG +N+   +F  +  K++++WN++I G    G     L  
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 376

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +M      PDE TFT  L AC   G    G  +  +  +      VK      +VD  
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYF-SENKSAEVKLDHYACMVDIL 435

Query: 262 VKCGCLVEA 270
            + G L EA
Sbjct: 436 GRSGKLEEA 444



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 41/369 (11%)

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
           RI+EA  +FD +    +  +  MI GY      D  L LF +M     + D  ++ S +K
Sbjct: 10  RIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEM----PVKDVVSWNSMIK 65

Query: 223 ACGSLGS----------------VGGGTQIHGFL------ITSGFPYSV--KTVIA-GSL 257
            C                     V   T I+GFL      +  G  Y +  + + A  S+
Sbjct: 66  GCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 125

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD- 316
           +  Y   G + +  R+F  +  ++VISW+S+I G  Q     EA+ LFRQ+    ++V  
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 185

Query: 317 -GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
                  ++   A+ + + QG QIHA+  K+    D  +S +++  Y  C  ++++  +F
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           +     NVV WT ++TGYG +   ++A+ +F +M+ + V P+  ++ + L++C   GL  
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC--CGL-- 301

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQT 491
           E+ ++  R  +   +K  +E    + +SL     R G L++   + + +  K +I  W +
Sbjct: 302 EALDW-GREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNS 359

Query: 492 LLSACRVHG 500
           ++  C  HG
Sbjct: 360 VIVGCAQHG 368



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 17/186 (9%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++  +     +L  C     LD+G ++H A VK+G   D+ + N LI MY +CG +N   
Sbjct: 284 VLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGV 343

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F ++ ++N+VSW +++ G  Q+G     L+ F QM  S V+P+E T       +G+LS
Sbjct: 344 VIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITF------TGLLS 397

Query: 128 SV-ENGMQIHGMCMKSGFEWNPVVG------NSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           +   +GM   G C+   F  N            ++D+  + G++ EA  +   MP K+  
Sbjct: 398 ACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA-- 455

Query: 181 TWNAMI 186
             N+M+
Sbjct: 456 --NSMV 459



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 17/164 (10%)

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           +L+   IDEA  +F+++   +V  +T++ITGY ++     A+ LF +M + DV    V++
Sbjct: 5   HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV----VSW 60

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
            +++  C     +  +++ F     D+  +  +  ++ +++   + G+++ A+ L   MP
Sbjct: 61  NSMIKGCFDCADLTMARKLF-----DEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP 115

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
            +  IA W +++     +G +E G       LRL  + P   V+
Sbjct: 116 FR-DIAAWNSMIYGYCCNGRVEDG-------LRLFQEMPCRNVI 151


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/591 (34%), Positives = 331/591 (56%), Gaps = 8/591 (1%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           + +  + P      + I A     ++     IH    +S    +  + NS+I MY KCG 
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +++A  +FD MP++ +++W  +IAGY       + + L   M      P+ FTFTS LKA
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
            G+ G    G Q+H   +   + +     +  +L+D Y +C  +  A  VFD +  K+ +
Sbjct: 171 TGACGGCSIGEQMHALAVK--YNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEV 228

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW++LI G+A++ +    +  F +++        F  SSM   FA    +EQG+ +HA+ 
Sbjct: 229 SWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL 288

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K    L   V N+++ MY K G + +A ++F+ M  +++VTW  ++T   ++GL KEAV
Sbjct: 289 IKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAV 348

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             F ++    ++ + + +L+VL+ACSH GLV+E + YF  +  D  ++P I+HY   VD 
Sbjct: 349 AHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDL 407

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGRAG L EA   +  MP++P+ A+W  LL ACR+H + ++G+   + +  LD D+    
Sbjct: 408 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPP 467

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           V++ NI+A  G WN+  R+RK+ ++ G+KK    SWV+++  +H F   DDTHP +  I+
Sbjct: 468 VLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIY 527

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
           ++  E+  R+K+  G+V    + L  I E+ +E  L+ HSEK+A+  AL+    N   G 
Sbjct: 528 RMWEEINMRIKKA-GYVPNTAHVLLHINEQERETKLKYHSEKIALAFALI----NMPAGA 582

Query: 644 VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            IR+ KN+R+CGDCH   K +SK+ K   VVRD  RFH F  G CSCGDYW
Sbjct: 583 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 205/385 (53%), Gaps = 5/385 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  L +   + D  L N LI MY KCG ++ A  VFDKM  R+VVSWT L+ G+ QN  
Sbjct: 82  IHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYM 141

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + L   M  +  +PN FT ++ +KA+G       G Q+H + +K  ++ +  VG++
Sbjct: 142 PAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSA 201

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY++C +++ A  +FD + +K+ ++WNA+IAG+      +  L+ F +MQ +G    
Sbjct: 202 LLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGAT 261

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
            FT++S   A   +G++  G  +H  LI SG    +   +  +++  Y K G +V+AR+V
Sbjct: 262 HFTYSSMFSAFARIGALEQGRWVHAHLIKSG--QKLTAFVGNTMLGMYAKSGSMVDARKV 319

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
           FD ++++ +++W++++   AQ     EA+  F ++R+  +Q++     S++   +   LV
Sbjct: 320 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 379

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG 392
           ++GK             +     S VD+  + GL+ EA     +MP++     W  ++  
Sbjct: 380 KEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPD 417
              H  AK  +G +    + +++PD
Sbjct: 440 CRMHKNAK--MGQYAADHVFELDPD 462



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   VK  +  D+ + + L+DMYA+C +M+ A  VFD+++ +N VSW AL+ GF +
Sbjct: 180 GEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFAR 239

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
             + +  L  F +M  +      FT S+   A   + ++E G  +H   +KSG +    V
Sbjct: 240 KADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFV 299

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++ MY+K G + +A ++FD M  + L+TWN M+      G   + +  F ++++ G 
Sbjct: 300 GNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGI 359

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++ TF S L AC   G V  G   H F +   +    +     S VD   + G L EA
Sbjct: 360 QLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEA 417

Query: 271 R-RVFDLIEQKSVISWSSLI 289
              VF +  + +   W +L+
Sbjct: 418 LIFVFKMPMEPTAAVWGALL 437



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 5/162 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G  +H  L+K G      + N ++ MYAK G M  A  VFD+M +R++V+W  ++  
Sbjct: 278 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 337

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             Q G  K  ++ F ++    ++ N+ T  + + A      V+ G   H   M   +   
Sbjct: 338 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQ 395

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMI 186
           P + +  S +D+  + G + EA      MP + +   W A++
Sbjct: 396 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 437


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/679 (33%), Positives = 379/679 (55%), Gaps = 33/679 (4%)

Query: 22  CSKNLLLDYGVQLHGALVKMG--FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
           C+    L     LH  ++K G  FSF     + LID Y KC  +  A  +FD+M  R++V
Sbjct: 11  CTNKKSLTTLKSLHTHILKSGSLFSF---FGHKLIDGYIKCSVITEARKLFDEMPNRHIV 67

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           +W +++   +  G  K  + L+  M    V P+ +T S   KA   +     G + HG+ 
Sbjct: 68  TWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLA 127

Query: 140 MKSGFEWNP-VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           +  GFE +   V   I+DMY+K G++ +A  +FD +  K ++ + A+I GY   G   + 
Sbjct: 128 VVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEA 187

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG--S 256
           L +F  M      P+E+T  S L +CG+LG +  G  IHG ++     Y +++V+A   S
Sbjct: 188 LEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVV----KYGLESVVASQTS 243

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y KC  + ++ +VF+ +   S ++W+S I+G  Q      A+ +FR++   S+  +
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPN 303

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F LSS++   +  A++E G+QIHA   K+    +  V  +++ +Y KCG +++A  +F+
Sbjct: 304 HFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFD 363

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +   ++V+   +I  Y ++G   EA+ LF ++    +EP+ V ++++L AC+++GLVEE
Sbjct: 364 SLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEE 423

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             + FS + N+  ++   +HY+C++D LGRA R +EA  LIE     P +  W+TLL+AC
Sbjct: 424 GCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNAC 482

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           ++HG++E+  +  + +L     +   +++++NI+A AG W+    ++   R   LKK   
Sbjct: 483 KIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPA 542

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SWV++D+E+H F  GD +HP   +I ++L E+ +++   LG+    K+ L D++EE K 
Sbjct: 543 MSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVI-TLGYNPDTKFVLQDLEEEKKI 601

Query: 617 ESLRVHSEKLAIGLALVRG-GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
            +L  HSEKLAI  AL +  G N      IR+FKNLRVCGD                + R
Sbjct: 602 SALYYHSEKLAIAFALWKTCGKN----TAIRIFKNLRVCGD--------------YIIAR 643

Query: 676 DATRFHRFEGGVCSCGDYW 694
           DA RFH F+GG+CSC DYW
Sbjct: 644 DAKRFHHFKGGICSCKDYW 662



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 138/275 (50%), Gaps = 1/275 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C     L  G  +HG +VK G    +     L+ MY+KC  +  +  VF+ + 
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + V+WT+ + G +QNG  +  LS+F +M   S+ PN FTLS+ + A   L+ +E G Q
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQ 325

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K G + N  V  ++I +Y KCG + +A  +FD +    +++ N MI  Y   G+
Sbjct: 326 IHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGF 385

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF ++++ G  P+  TF S L AC + G V  G QI   LI +     +     
Sbjct: 386 GHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHY 444

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
             ++D   +     EA  + +  +   VI W +L+
Sbjct: 445 TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLL 479


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/650 (34%), Positives = 360/650 (55%), Gaps = 55/650 (8%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ-NGNAKACLSLFCQM 104
           D++  N  I  + +  ++  A  VF+KM  R  V+W  ++ G+ +  G  K    LF ++
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
                      L   +++ GV +++      + M +K    WN     ++I  +++ G++
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALA---FFNKMPVKDIASWN-----TLISGFAQNGQM 183

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            +A  +F VMP K+ ++W+AMI+GYV                EHG+          L+A 
Sbjct: 184 QKAFDLFSVMPEKNGVSWSAMISGYV----------------EHGD----------LEAA 217

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
             L    G   +               V+  +++  Y+K G +  A R+F  +  K++++
Sbjct: 218 EELYKNVGMKSV---------------VVETAMLTGYMKFGKVELAERIFQRMAVKNLVT 262

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+S+I GY +     + +++F+ + E  ++ +   LSS++   ++ + +  G+Q+H   +
Sbjct: 263 WNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVS 322

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           K P   DT+   S++ MY KCG +D A +LF EMP K+V+TW  +I+GY +HG  ++A+ 
Sbjct: 323 KSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALH 382

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF KM    ++PD + ++AV+ AC+H+G V+   +YF  +  +  ++ +  HY+C++D L
Sbjct: 383 LFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLL 442

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GRAGRLDEA +LI+ MP  P  AI+ TLL ACR+H +L+L       LL LD  +   YV
Sbjct: 443 GRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYV 502

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
            ++NI+A    W++  ++RK+ +   + K+ G SW+E+    H F   D  HP    IH+
Sbjct: 503 QLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHK 562

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
            L E++ +MK   G+V  +++ALHD++EE KE+ L  HSEKLAI   L++      PG  
Sbjct: 563 KLNELDGKMKLA-GYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTA----PGTP 617

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IRVFKNLRVCGDCH  IK +S I K   +VRD TRFH F  G CSCGDYW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 171/355 (48%), Gaps = 44/355 (12%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  YGV+   A        D+   N LI  +A+ G+M  A  +F  M E+N VSW+A++ 
Sbjct: 147 LRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMIS 206

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G++++G+ +A   L+  +G  SV                                     
Sbjct: 207 GYVEHGDLEAAEELYKNVGMKSV------------------------------------- 229

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
             VV  +++  Y K G++  A R+F  M  K+L+TWN+MIAGYV    ++ GL +F+ M 
Sbjct: 230 --VVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMI 287

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
           E    P+  + +S L  C +L ++  G Q+H  +  S  P S  T    SL+  Y KCG 
Sbjct: 288 ESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS--PLSKDTTACTSLISMYCKCGD 345

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  A ++F  + +K VI+W+++I GYAQ     +A+ LF ++R  +++ D     +++  
Sbjct: 346 LDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMP 379
                 V+ G Q +  + K   G++    +   ++D+  + G +DEA  L  EMP
Sbjct: 406 CNHAGFVDLGVQ-YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP 459



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 5/180 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L  G Q+H  + K   S D      LI MY KCG+++ A  +F +M 
Sbjct: 298 LSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP 357

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++V++W A++ G+ Q+G  +  L LF +M + ++KP+  T    I A      V+ G+Q
Sbjct: 358 RKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
               M  + G E  PV    +ID+  + GR++EA  +   MP     T +A I G +L  
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP----FTPHAAIYGTLLGA 473



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK-HGLAKEAVG 404
           V +  D    N  +  +++   ++ A  +F +M V+  VTW  +++GY K  G  KEA  
Sbjct: 67  VDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHE 126

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF K+     EPD V+Y  +L     S  V+ +  +F+++         I  ++ ++   
Sbjct: 127 LFDKI----PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKD-----IASWNTLISGF 177

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + G++ +A +L   MP K  ++ W  ++S    HGDLE   E+
Sbjct: 178 AQNGQMQKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLEAAEEL 220


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/617 (36%), Positives = 343/617 (55%), Gaps = 23/617 (3%)

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           A  C FLQ       LSL+ QM     +PN FT    +K+   LS    G Q HG   K 
Sbjct: 16  AKRCQFLQ------ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKV 69

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMF--DVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           G  + P V   +I MY K   ++ A ++F  +    K  + +NA+++GYV        +L
Sbjct: 70  GCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVL 129

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LFR+M E G   +  T    + AC S  ++  G+ +H   +  GF   V  V     +  
Sbjct: 130 LFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV--NCFITM 187

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y+KCG +  A+++FD +  K +ISW++++ GYAQ       +EL+R +    +  D   L
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
             ++   A+      G ++           +  ++N++++MY +CG + +A  +F+ MP 
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           + +V+WT II GYG HG  + AV LF++M+   +EPDG A++ VLSACSH+GL ++  EY
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +  + +++P  EHYSC+VD LGRAGRL EA+ LIESMP+KP  A+W  LL AC++H 
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           ++EL     E ++ L+ +N   YV++SNI+++A +     R+R + + K LKK  G S+V
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           E+   +H F  GD  H  +++I++VL E+E  + +E G          D +EES ++   
Sbjct: 488 ELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG------KPEKDNREESNKDGFT 541

Query: 621 ---VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
              VHSEKLA+   L    LN   G  + + KNLR+C DCH F K +SKI+     VRDA
Sbjct: 542 RVGVHSEKLAVAFGL----LNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDA 597

Query: 678 TRFHRFEGGVCSCGDYW 694
           TRFH F  G CSC DYW
Sbjct: 598 TRFHHFRNGSCSCKDYW 614



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 208/415 (50%), Gaps = 12/415 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C+   L   G Q HG + K+G  F+  +   LI MY K   ++ A  VF++     
Sbjct: 46  ALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSR 105

Query: 78  --VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
              V + AL+ G++ N      + LF QM    V  N  TL   I A     ++E G  +
Sbjct: 106 KLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSL 165

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   +K GF+ +  V N  I MY KCG +N A ++FD MP K LI+WNAM++GY   G +
Sbjct: 166 HCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLA 225

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
              L L+R M  +G  PD  T    L +C +LG+   G ++   +  SGF  +    +  
Sbjct: 226 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGF--TSNPFLNN 283

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L++ Y +CG L +A+ VFD + +++++SW+++I GY    +   A++LF+++    ++ 
Sbjct: 284 ALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEP 343

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           DG     ++   +   L +QG +      +   +  G +    + +VD+  + G + EA 
Sbjct: 344 DGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEH--YSCMVDLLGRAGRLKEAQ 401

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            L   MP+K +   W  ++     H   + A   F +++  ++EP+ + Y  +LS
Sbjct: 402 TLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI--ELEPENIGYYVLLS 454



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 18/252 (7%)

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++ +   A+     +A+ L+ Q+     + + F     +   A  +L   G Q H    
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE--MPVKNVVTWTVIITGYGKHGLAKEA 402
           KV    +  V   ++ MY K  L+D A ++F E     K  V +  +++GY  +    +A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           V LFR+M  + V  + V  L ++ AC S   L   S  + S L         +   +C +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL--KYGFDSDVSVVNCFI 185

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
               + G ++ A+ L + MPVK  I+ W  ++S    +G   L   V E+   +D     
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLIS-WNAMVSGYAQNG---LATNVLELYRNMD----- 236

Query: 522 NYVMMSNIHADA 533
               M+ +H D 
Sbjct: 237 ----MNGVHPDP 244


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/617 (34%), Positives = 346/617 (56%), Gaps = 17/617 (2%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+    + GN K  L L C        P + T    I +    +S+  G+ +H   + SG
Sbjct: 53  LIQSLCKGGNLKQALHLLC----CEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSG 108

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F+ +P +   +I+MY + G I+ A ++FD    +++  WNA+     + G+  + L L+ 
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYI 168

Query: 204 KMQEHGEIPDEFTFTSTLKACG----SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +M   G   D FT+T  LKAC     S+  +  G +IH  ++  G+  ++   +  +L+D
Sbjct: 169 QMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIH--VMTTLLD 226

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ--VDG 317
            Y K G +  A  VF  +  K+ +SWS++I  +A+ E   +A+ELF+ +   +     + 
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNS 286

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
             + +M+   A  A +EQGK IH Y  +        V N+++ MY +CG +     +F+ 
Sbjct: 287 VTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDN 346

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  ++VV+W  +I+ YG HG  K+A+ +F  M+   V P  ++++ VL ACSH+GLVEE 
Sbjct: 347 MKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEG 406

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +  F  + +  R+ P +EHY+C+VD LGRA RL EA  LIE M  +P   +W +LL +CR
Sbjct: 407 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCR 466

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           +H ++EL      +L  L+  N  NYV++++I+A+A  W+E + + KL  ++GL+K+ G 
Sbjct: 467 IHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGC 526

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           SW+EV ++++ F   D+ +P  E+IH +L+++   MK + G+V      L+D+ EE KE 
Sbjct: 527 SWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQ-GYVPQTNVVLYDLDEEEKER 585

Query: 618 SLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDA 677
            +  HSEKLA+   L+    N   G+ IR+ KNLR+C DCH   K +SK      +VRD 
Sbjct: 586 IVLGHSEKLAVAFGLI----NTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDV 641

Query: 678 TRFHRFEGGVCSCGDYW 694
            RFH F  GVCSCGDYW
Sbjct: 642 NRFHHFRDGVCSCGDYW 658



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 171/332 (51%), Gaps = 8/332 (2%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           +Q     +  C++   L YG+ +H  LV  GF  D  L   LI+MY + G ++ A  VFD
Sbjct: 78  QQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFD 137

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV----LS 127
           +  ER +  W AL       G+ K  L L+ QM       + FT +  +KA  V    + 
Sbjct: 138 ETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVC 197

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
            +  G +IH   ++ G+E N  V  +++D+Y+K G ++ A  +F  MP K+ ++W+AMIA
Sbjct: 198 PLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIA 257

Query: 188 GYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            +       K L LF+ M  +    +P+  T  + L+AC  L ++  G  IHG+++    
Sbjct: 258 CFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQL 317

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S+  V+  +L+  Y +CG ++  +RVFD ++++ V+SW+SLI  Y       +A+++F
Sbjct: 318 D-SILPVL-NALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             +  + +        +++G  +   LVE+GK
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 3/162 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           + + L+ C+    L+ G  +HG +++      L + N LI MY +CGE+     VFD M 
Sbjct: 289 MVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMK 348

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R+VVSW +L+  +  +G  K  + +F  M    V P+  +  T + A      VE G +
Sbjct: 349 KRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEG-K 407

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM 174
           I    M S +  +P + +   ++D+  +  R+ EA ++ + M
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDM 449


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 237/715 (33%), Positives = 382/715 (53%), Gaps = 48/715 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C ++L L+ G+Q+H   +K+G+S  + + N LI +Y KCG ++ A  +FD+M +R++
Sbjct: 210 LTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDI 269

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  ++   ++  + +  L LF  +  +   K ++FTLST + A     +   G +IH 
Sbjct: 270 ASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHA 329

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G E N  V N+II  Y++CG +N  A +F+ MP + +ITW  MI  Y+  G  D 
Sbjct: 330 YAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDL 389

Query: 198 GLLLFRKM--------------------------------QEHGEIPDEFTFTSTLKACG 225
            + +F KM                                QE  E+ D FT T  + ACG
Sbjct: 390 AVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTD-FTLTGVINACG 448

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK--SVI 283
            L  +    QIHGF+I  GF       I  +L+D   KCG + +A R+F  +     + I
Sbjct: 449 LLLKLEISRQIHGFIIKFGF--RSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSI 506

Query: 284 SWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
             +S+I GYA+     EA+ LF R   E ++ +D    +S++GV       E GKQIH  
Sbjct: 507 IQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQ 566

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A K     +  V NSI+ MY KC  ID+A + FN MP  +VV+W  +I G   H    EA
Sbjct: 567 ALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEA 626

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSAC--SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           + ++  M    ++PD + ++ ++SA   + S L++E +  F  +     ++P  EHY+ +
Sbjct: 627 LAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASL 686

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           V  LG  G L+EA+ LI  MP  P +++W+ LL  CR+H +  +G+ V + ++ ++  +P
Sbjct: 687 VGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDP 746

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             YV++SN++A +G W+  E +R+  R +GL+K   RSWV + K++H FY  D +HP + 
Sbjct: 747 STYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSN 806

Query: 581 KIHQVL-MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
            I+  L + + K +K   G+   + + L +++E+ K++ L  HS KLA    L    L  
Sbjct: 807 DIYSGLDILILKCLKA--GYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGL----LKT 860

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +PG+ IRV KN+ +C DCH F+K  + + +   + RDA+ FH F  G CSC  YW
Sbjct: 861 RPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 245/529 (46%), Gaps = 51/529 (9%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           E   L + LR   K   +D    LH +++K+G   D  L N +I  Y K G +  A  VF
Sbjct: 103 EVDDLFNLLRLSVKYTDIDLARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVF 160

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
             M   +VVS++AL+  F +       + LF +M  S ++PNE++    + A      +E
Sbjct: 161 MGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELE 220

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G+Q+H + +K G+     V N++I +Y KCG ++ A  +FD MP + + +WN MI+  V
Sbjct: 221 MGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLV 280

Query: 191 LAGYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
                +K L LFR + Q  G   D+FT ++ L AC    +   G +IH + I  G   ++
Sbjct: 281 KGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNL 340

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ--------------- 294
              ++ +++ FY +CG L     +F+ +  + +I+W+ +I  Y +               
Sbjct: 341 S--VSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMP 398

Query: 295 EENLA----------------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           E+N                  +A+ LF ++ +   ++  F L+ ++        +E  +Q
Sbjct: 399 EKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQ 458

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKH 396
           IH +  K     +  +  +++DM  KCG +D+A  +F  +     N +  T +I GY ++
Sbjct: 459 IHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARN 518

Query: 397 GLAKEAVGLFRK------MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           GL +EA+ LF +      M+LD+     VA+ ++L  C   G  E  ++   +       
Sbjct: 519 GLPEEAICLFYRCQSEGTMVLDE-----VAFTSILGVCGTLGFHEVGKQIHCQALKTG-F 572

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
              +   + I+    +   +D+A     +MP    ++ W  L++   +H
Sbjct: 573 HAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVS-WNGLIAGQLLH 620


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/717 (31%), Positives = 376/717 (52%), Gaps = 78/717 (10%)

Query: 51  NDLIDMYAKCGEMNGACAVFD--KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS- 107
             L+  YA  G +  + A FD   +  R+ V   A++  F +   A   +S+F  + +S 
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 108 -SVKPNEFTLSTNIKASGVLS--SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC--- 161
            S++P++++ ++ + A G +   +V +  Q+H    K G      V N++I +Y KC   
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212

Query: 162 GRINEAARMFDVMPAKSLITW-------------------------------NAMIAGYV 190
           G   +A ++ D MP K  +TW                               NAMI+GYV
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG--------FLIT 242
            +G   +   LFR+M      PDEFTFTS L AC + G    G  +HG        F+  
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 243 SGFPY----------SVKTVIAGSLVDF---------------YVKCGCLVEARRVFDLI 277
           +  P           S K  +A  + D                Y++ GCL  A R+F  +
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             KS +SW  ++ GY       +A++LF Q+R   ++   +  +  +    +   ++ GK
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           Q+HA+  +       S  N+++ MY +CG + +A  +F  MP  + V+W  +I+  G+HG
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             +EA+ LF +M+   + PD +++L +L+AC+H+GLV++  +YF  +  D  + P  +HY
Sbjct: 513 HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           + ++D LGRAGR+ EA++LI++MP +P+ AIW+ +LS CR++GD+ELG    + L ++  
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVP 632

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
           ++   Y+++SN ++ AG W +  R+RKL R +G+KK  G SW+EV  ++H F  GD  HP
Sbjct: 633 EHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHP 692

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
              ++++ L  +  +M+ +LG+V   K+AL D+    KE  L  HSE+LA+   L    L
Sbjct: 693 DAHEVYRFLEMVGAKMR-KLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGL----L 747

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
               G  + V KNL++CGDCH  +  +S+ +    VVRD  RFH F+ G CSCG+YW
Sbjct: 748 KLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 197/441 (44%), Gaps = 77/441 (17%)

Query: 25  NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNGACAVFDKMLERNVVSW 81
           +L + +  QLH A+ K+G    L ++N LI +Y KC   G    A  V D+M E++ ++W
Sbjct: 174 DLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTW 233

Query: 82  T-------------------------------ALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           T                               A++ G++Q+G       LF +M S  + 
Sbjct: 234 TTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIP 293

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP----VVGNSIIDMYSKCGRI-- 164
           P+EFT ++ + A        +G  +HG  ++   ++ P     V N+++ +YSK G+I  
Sbjct: 294 PDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAV 353

Query: 165 -----------------------------NEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
                                        + AAR+F  MP KS ++W  M++GYV  G +
Sbjct: 354 ATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLA 413

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +  L LF +M+     P ++T+   + ACG LG++  G Q+H  L+  GF  S       
Sbjct: 414 EDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEAS--NSAGN 471

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+  Y +CG + +AR VF ++     +SW+++I    Q  +  EA+ELF Q+  + +  
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP 531

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           D     +++       LV+ G Q      +   +  G D      ++D+  + G I EA 
Sbjct: 532 DRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYA--RLIDLLGRAGRIGEAR 589

Query: 373 ELFNEMPVKNV-VTWTVIITG 392
           +L   MP +     W  I++G
Sbjct: 590 DLIKTMPFEPTPAIWEAILSG 610



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 205/474 (43%), Gaps = 97/474 (20%)

Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
           +TLS ++    VL   + G               PV   S++  Y+  GR+ ++A  FD 
Sbjct: 70  YTLSPDLATPAVLFRADPG---------------PVAATSLVSAYAVAGRLRDSAAFFDS 114

Query: 174 MPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLG- 228
           +P   +  +  NAMI+ +  A  +   + +FR +   +    PD+++FTS L A G +  
Sbjct: 115 VPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHD 174

Query: 229 -SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC---GCLVEARRVFDLIEQKSVIS 284
            +V   TQ+H  +   G        ++ +L+  Y+KC   G   +AR+V D + +K  ++
Sbjct: 175 LAVSHCTQLHCAVHKLG--AGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELT 232

Query: 285 WSSLIL-------------------------------GYAQEENLAEAMELFRQLRERSL 313
           W+++++                               GY Q    AEA ELFR++  + +
Sbjct: 233 WTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRI 292

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIH--------------------------------A 341
             D F  +S++   A+      GK +H                                A
Sbjct: 293 PPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIA 352

Query: 342 YAAKVPSGL---DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
            A K+   +   D    N+I+  Y++ G +D A  +F EMP K+ ++W V+++GY   GL
Sbjct: 353 VATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           A++A+ LF +M  +DV+P    Y   ++AC   G ++  ++  + L      +      +
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCG-FEASNSAGN 471

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++    R G + +A+ +   MP   S++ W  ++SA   HG    GRE  E+ 
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMPNVDSVS-WNAMISALGQHGH---GREALELF 521



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 53/317 (16%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF----DLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  C+      +G  +HG  +++   F     L +NN L+ +Y+K G++  A  +FD M 
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMT 362

Query: 75  ERNVVSWTALMCGFLQNGN-------------------------------AKACLSLFCQ 103
            ++VVSW  ++ G++++G                                A+  L LF Q
Sbjct: 363 LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQ 422

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M S  VKP ++T +  + A G L ++++G Q+H   ++ GFE +   GN+++ MY++CG 
Sbjct: 423 MRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGA 482

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A  +F VMP    ++WNAMI+     G+  + L LF +M   G  PD  +F + L A
Sbjct: 483 VKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTA 542

Query: 224 CGSLGSVGGGTQI-----HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
           C   G V  G Q        F I+ G  +  +      L+D   + G + EAR   DLI+
Sbjct: 543 CNHAGLVDDGFQYFESMERDFGISPGEDHYAR------LIDLLGRAGRIGEAR---DLIK 593

Query: 279 ----QKSVISWSSLILG 291
               + +   W +++ G
Sbjct: 594 TMPFEPTPAIWEAILSG 610



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A ++  C +   L +G QLH  LV+ GF       N L+ MYA+CG +  A  VF  M  
Sbjct: 436 AGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPN 495

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            + VSW A++    Q+G+ +  L LF QM +  + P+  +  T + A      V++G Q 
Sbjct: 496 VDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ- 554

Query: 136 HGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLA 192
           +   M+  F  +P   +   +ID+  + GRI EA  +   MP   +   W A+++G  + 
Sbjct: 555 YFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRIN 614

Query: 193 GYSDKGLL----LFRKMQEH 208
           G  + G      LF+ + EH
Sbjct: 615 GDMELGAYAADQLFKMVPEH 634


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/589 (34%), Positives = 333/589 (56%), Gaps = 8/589 (1%)

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           +  + P      + I A     ++     IH    +S    +  + NS+I MY KCG ++
Sbjct: 55  TGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVS 114

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A  +FD +P + +++W  +I GY       + L L   M      P  FTFTS LKA G
Sbjct: 115 DARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAG 174

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           + G  G G Q+H   +       V   +  +L+D Y +C  +  A RVFD ++ K+ +SW
Sbjct: 175 ACGGRGIGEQMHALAVKYNLDEDV--YVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSW 232

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++LI G+A++ +    +  F +++        F  SS+    A    +EQG+ +HA+  K
Sbjct: 233 NALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIK 292

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               L   V+N+I+ MY K G + +A ++F+ +  +++VTW  ++T + ++GL KEAV  
Sbjct: 293 SGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAH 352

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F ++    ++ + + +L+VL+ACSH GLV+E ++YF  +  D  ++P I+HY   VD LG
Sbjct: 353 FEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLG 411

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L EA   +  MP++P+ A+W  LL ACR+H + ++G+   + +  LD ++    V+
Sbjct: 412 RAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVL 471

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           + NI+A  G W++  R+RK+ ++ G+KK    SWVE++  +H F   D THP +E+I+++
Sbjct: 472 LYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRM 531

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
             E+  R+K+  G+V    Y L  I+E+ +E  L+ HSEK+A+  AL+    N   G  I
Sbjct: 532 WEEVNTRIKKA-GYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALI----NMPAGATI 586

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KN+R+CGDCH   + +S++ K   VVRD  RFH F  G CSCGDYW
Sbjct: 587 RIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 217/402 (53%), Gaps = 9/402 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+++  L     +H  L +   + D  L N LI MY KCG ++ A  VFD +  R+V
Sbjct: 69  ITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDV 128

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT L+ G+ QN      L L   M  +  +P+ FT ++ +KA+G       G Q+H +
Sbjct: 129 VSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHAL 188

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K   + +  VG++++DMY++C +++ A R+FD + +K+ ++WNA+IAG+   G  +  
Sbjct: 189 AVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETT 248

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L+ F +MQ +G     FT++S   A   +G++  G  +H  +I SG    +   +A +++
Sbjct: 249 LMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSG--QKLTAFVANTIL 306

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y K G +V+AR+VFD ++Q+ +++W++++  +AQ     EA+  F ++R+  +Q++  
Sbjct: 307 GMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQI 366

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAA--KVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              S++   +   LV++GKQ         V   +D  V  S VD+  + GL+ EA     
Sbjct: 367 TFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYV--SFVDLLGRAGLLKEALIFVF 424

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +MP++     W  ++     H  AK  +G +    + +++P+
Sbjct: 425 KMPMEPTAAVWGALLGACRMHKNAK--IGQYAADHVFELDPE 464


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/674 (34%), Positives = 366/674 (54%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C        G ++H  +++ GF  ++ + N L+ MYAKCG++  A  VFD M   + 
Sbjct: 196 LRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDC 255

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G  +NG   A L LF  M    V+PN  T+++   ASG+LS V    ++HG+
Sbjct: 256 ISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGL 315

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  +    NS+I MY+  G + +A  +F  M  +  +TW AMI+GY   G+ DK 
Sbjct: 316 AVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKA 375

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L ++  M+ +   PD+ T  S L AC  LGS+  G ++H    + GF   +  V+  +++
Sbjct: 376 LEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI--VVTNAIL 433

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K   + +A  VF  + +K V+SWSS+I G+       EA+  FR +    ++ +  
Sbjct: 434 EMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSV 492

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              + +   A    +  GK+IHA+  +     +  + N+++D+Y+KCG    A   F   
Sbjct: 493 TFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAH 552

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W ++I G+  HG    A+  F +M+     PD V ++A+L ACS  G+V E  
Sbjct: 553 GAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW 612

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E F  +     + P ++HY+C+VD L RAG+L EA N I  MP+ P  A+W  LL+ CR+
Sbjct: 613 ELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRI 672

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H  +ELG    + +L L+ ++   +V++ +++ADA  W++  R+RK  R KGL   +G S
Sbjct: 673 HRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCS 732

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV   +H F   D++HP   +I+ VL  + +RMK   G+     +   D  E  K++ 
Sbjct: 733 WVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKAS-GYAPVESHCPED--EVLKDDI 789

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+LA+   L+    N  PG  I V KN   C  CH  +K +S I++   +VRD+ 
Sbjct: 790 FCGHSERLAVAFGLI----NTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVRDSK 845

Query: 679 RFHRFEGGVCSCGD 692
           + H F+ G CSCGD
Sbjct: 846 QLHHFKDGSCSCGD 859



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 196/378 (51%), Gaps = 3/378 (0%)

Query: 45  FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
           F L L N ++ M  + GE   A  VF KM ER+V SW  ++ G+ ++G     L L+ +M
Sbjct: 121 FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRM 180

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             + V+P+ +T    +++ G +     G ++H   ++ GF     V N+++ MY+KCG +
Sbjct: 181 MWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDV 240

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             A ++FD M     I+WNAMIAG+   G  + GL LF  M      P+  T TS   A 
Sbjct: 241 MAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVAS 300

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
           G L  V    ++HG  +  GF   V      SL+  Y   G + +AR VF  ++ +  ++
Sbjct: 301 GLLSDVTFAKEMHGLAVKRGFAGDV--AFCNSLIQMYASLGMMRQARTVFSRMDTRDAMT 358

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I GY +     +A+E++  +   ++  D   ++S +   A    ++ G ++H  A 
Sbjct: 359 WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAE 418

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
                    V+N+I++MY K   ID+A E+F  M  K+VV+W+ +I G+  +    EA+ 
Sbjct: 419 SKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALY 478

Query: 405 LFRKMLLDDVEPDGVAYL 422
            FR ML  DV+P+ V ++
Sbjct: 479 YFRHMLA-DVKPNSVTFI 495



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 2/176 (1%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           VE G +  A+A    +     + N+++ M ++ G    A  +F +MP ++V +W V++ G
Sbjct: 104 VEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGG 163

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YGK GL  EA+ L+ +M+   V PD   +  VL +C         +E  + +        
Sbjct: 164 YGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FGE 222

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++  + ++    + G +  A+ + +SM V   I+ W  +++    +G+   G E+
Sbjct: 223 EVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCIS-WNAMIAGHFENGECNAGLEL 277


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/542 (37%), Positives = 321/542 (59%), Gaps = 49/542 (9%)

Query: 157 MYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK-GLLLFRKMQEHGEIP 212
           MY+KC   G ++++ ++F+ MP  ++++W A+I  YV +G  DK  + LF KM       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
                        S+  VG                        SL+  Y + G + +AR+
Sbjct: 54  ----------ISASVNCVGN-----------------------SLISMYARSGRMEDARK 80

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            FD++ +K+++S+++++ GYA+     EA  LF ++ +  + +  F  +S++   A    
Sbjct: 81  AFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA 140

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           + +G+QIH    K     +  + N+++ MY +CG I+ A ++FNEM  +NV++WT +ITG
Sbjct: 141 MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG 200

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           + KHG A  A+ +F KML    +P+ + Y+AVLSACSH G++ E Q++F+ +  +  + P
Sbjct: 201 FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 260

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           R+EHY+C+VD LGR+G L EA   I SMP+     +W+TLL ACRVHG+ ELGR   E++
Sbjct: 261 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI 320

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L  + D+P  Y+++SN+HA AG W +  ++RK  + + L K AG SW+EV+  +H F+ G
Sbjct: 321 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVG 380

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           + +HP   +I+Q L ++  ++K E+G++    + LHDI+EE KE+ L  HSEK+A+   L
Sbjct: 381 ETSHPQAWQIYQELDQLASKIK-EMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGL 439

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    +    K IR+FKNLRVCGDCH  IK +S       VVRD+ RFH  + GVCSC D
Sbjct: 440 I----STSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 495

Query: 693 YW 694
           YW
Sbjct: 496 YW 497



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 191/378 (50%), Gaps = 50/378 (13%)

Query: 56  MYAKC---GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA-KACLSLFCQMGSSSVKP 111
           MYAKC   G ++ +  VF++M E NV+SWTA++  ++Q+G   K  + LFC+M S+SV  
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
                                                 VGNS+I MY++ GR+ +A + F
Sbjct: 60  -------------------------------------CVGNSLISMYARSGRMEDARKAF 82

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D++  K+L+++NA++ GY     S++  LLF ++ + G     FTF S L    S+G++G
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G QIHG L+  G  Y     I  +L+  Y +CG +  A +VF+ +E ++VISW+S+I G
Sbjct: 143 KGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITG 200

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           +A+      A+E+F ++ E   + +     +++   +   ++ +G Q H  +     G+ 
Sbjct: 201 FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIV 259

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             + +   +VD+  + GL+ EA E  N MP+  + + W  ++     HG     +G    
Sbjct: 260 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG--NTELGRHAA 317

Query: 409 MLLDDVEPDGVAYLAVLS 426
            ++ + EPD  A   +LS
Sbjct: 318 EMILEQEPDDPAAYILLS 335



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 123/222 (55%), Gaps = 1/222 (0%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           + N LI MYA+ G M  A   FD + E+N+VS+ A++ G+ +N  ++    LF ++  + 
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           +  + FT ++ +  +  + ++  G QIHG  +K G++ N  + N++I MYS+CG I  A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           ++F+ M  +++I+W +MI G+   G++ + L +F KM E G  P+E T+ + L AC  +G
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            +  G Q H   +        +      +VD   + G LVEA
Sbjct: 241 MISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 281



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 4/171 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+HG L+K G+  +  + N LI MY++CG +  A  VF++M +RNV+SWT+++ GF +
Sbjct: 144 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 203

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEWNPV 149
           +G A   L +F +M  +  KPNE T    + A   +  +  G +  + M  + G      
Sbjct: 204 HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRME 263

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKG 198
               ++D+  + G + EA    + MP  A +L+ W  ++    + G ++ G
Sbjct: 264 HYACMVDLLGRSGLLVEAMEFINSMPLMADALV-WRTLLGACRVHGNTELG 313


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/546 (38%), Positives = 329/546 (60%), Gaps = 10/546 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H  +VK G    + + N L+D+Y KCG +  +  VFD++ ERN VSW A++     
Sbjct: 128 GRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAY 187

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  L +F  M    VKPN  T S+ +     L   + G +IHG  ++ G E +  V
Sbjct: 188 LERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFV 247

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++IDMY+K GR  +A+ +F+ +  K++++WNAM+A +         + L R+MQ  GE
Sbjct: 248 ANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           IP+  TFT+ L AC  +G +  G +IH   I +G   SV   ++ +L D Y KCGCL  A
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEIHARAIRTG--SSVDLFVSNALTDMYAKCGCLNLA 365

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF--- 327
           RRVF  I  +  +S++ LI+GY+Q  N +E++ LF ++  + +++D   + S MGV    
Sbjct: 366 RRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLD---VVSYMGVISAC 421

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A+ A ++QGK++H  A +        ++N+++D Y+KCG ID A ++F ++P ++  +W 
Sbjct: 422 ANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWN 481

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I GYG  G    A+ LF  M  D VE D V+Y+AVLSACSH GLVEE ++YF  +   
Sbjct: 482 SMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QV 540

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           + +KP   HY+C+VD LGRAG ++EA  LIES+P++P   +W  LL ACR+HG +EL   
Sbjct: 541 QNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHW 600

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             E L +L   +   Y ++SN++A+AG W+E  ++RKL +S+G KK  G SWV++D ++H
Sbjct: 601 AAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVH 660

Query: 568 FFYGGD 573
            F  G+
Sbjct: 661 AFVAGE 666



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 269/495 (54%), Gaps = 6/495 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+ +L +  G ++HG + K+GF  D+ + N L+  Y  CG +     VFD+MLER+V
Sbjct: 14  LKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDV 73

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW +++  F  +G     + LFC+M   S  +PN  ++ + +     L     G QIH 
Sbjct: 74  VSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHC 133

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K+G +    VGN+++D+Y KCG + ++ R+FD +  ++ ++WNA+I        +  
Sbjct: 134 YVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQD 193

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L +FR M + G  P+  TF+S L     L     G +IHGF +  G    +   +A +L
Sbjct: 194 ALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDI--FVANAL 251

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y K G  ++A  VF+ I +K+++SW++++  +AQ      A++L RQ++      + 
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNS 311

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
              ++++   A    +  GK+IHA A +  S +D  VSN++ DMY KCG ++ A  +F +
Sbjct: 312 VTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-K 370

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           + +++ V++ ++I GY +     E++ LF +M +  ++ D V+Y+ V+SAC++   +++ 
Sbjct: 371 ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +E    L   K +   +   + ++D   + GR+D A  +   +P + + A W +++    
Sbjct: 431 KEVHG-LAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT-ASWNSMILGYG 488

Query: 498 VHGDLELGREVGEIL 512
           + G+L +   + E +
Sbjct: 489 MLGELTIAINLFEAM 503



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 187/336 (55%), Gaps = 3/336 (0%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V+ ++ T    +KA     SV+ G +IHG+  K GF+ +  VGN+++  Y  CG + +  
Sbjct: 3   VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSL 227
           R+FD M  + +++WN++I  + + G+  + + LF +M    G  P+  +  S L  C  L
Sbjct: 63  RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
                G QIH +++ +G    V   +  +LVD Y KCG + ++RRVFD I +++ +SW++
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQV--TVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I   A  E   +A+E+FR + +  ++ +    SSM+ V  +  L + GK+IH ++ +  
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              D  V+N+++DMY K G   +A+ +FN++  KN+V+W  ++  + ++ L   AV L R
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           +M  D   P+ V +  VL AC+  G +   +E  +R
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHAR 336



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 220/458 (48%), Gaps = 47/458 (10%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L D+G ++HG  ++ G   D+ + N LIDMYAK G    A  VF+++ E+N+VSW A++ 
Sbjct: 225 LFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVA 284

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            F QN    A + L  QM +    PN  T +  + A   +  +  G +IH   +++G   
Sbjct: 285 NFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSV 344

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V N++ DMY+KCG +N A R+F +   +  +++N +I GY       + L LF +M 
Sbjct: 345 DLFVSNALTDMYAKCGCLNLARRVFKI-SLRDEVSYNILIIGYSQTTNCSESLRLFLEMG 403

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G   D  ++   + AC +L ++  G ++HG  +           IA +L+DFY+KCG 
Sbjct: 404 IKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHL--HTHLFIANALLDFYIKCGR 461

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           +  A +VF  I  +   SW+S+ILGY     L  A+ LF  ++E  ++ D     +++  
Sbjct: 462 IDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSA 521

Query: 327 FADFALVEQGKQI--HAYAAKV-PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
            +   LVE+GK+   H     + P+ +  +    +VD+  + GLI+EA +L   +P    
Sbjct: 522 CSHGGLVEEGKKYFEHMQVQNIKPTQMHYA---CMVDLLGRAGLIEEAVKLIESLP---- 574

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
                                         +EPD   + A+L AC   G +E +      
Sbjct: 575 ------------------------------IEPDANVWGALLGACRIHGYIELAHWAAEH 604

Query: 444 LCNDKRMKPRIE-HYSCIVDSLGRAGRLDEAKNLIESM 480
           L    ++KP+   +YS + +    AG+ DEA  + + M
Sbjct: 605 LF---KLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLM 639



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 1/177 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+    L  G ++HG  V+      L + N L+D Y KCG ++ A  VF ++  R+ 
Sbjct: 418 ISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT 477

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW +++ G+   G     ++LF  M    V+ +  +    + A      VE G +    
Sbjct: 478 ASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEH 537

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGY 194
                 +   +    ++D+  + G I EA ++ + +P +     W A++    + GY
Sbjct: 538 MQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGY 594


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/671 (34%), Positives = 370/671 (55%), Gaps = 15/671 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +   +++  F    +L   LI +Y +CG ++ A  + + M +R+VV+W A++    Q
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQ 338

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV- 149
           NG+    + L  +M       N+ T  + ++A   L ++  G +IH   +  G     V 
Sbjct: 339 NGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVA 398

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VGNS+I MY KCG+   A  +F+ MP K  ++WNA+I   V        L LF  M+  G
Sbjct: 399 VGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG 458

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              +EFT  S L+ACG L  +    QIH      GF  +  T +  S+V+ Y +CG L++
Sbjct: 459 LRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGN-STAVGNSVVNMYARCGSLLD 517

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLA--EAMELFRQLRERSLQVDGFVLSSMMGVF 327
           A++ FD +E+K +++WS ++  YAQ ++     A + F+++    ++       S +   
Sbjct: 518 AKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDAC 577

Query: 328 ADFALVEQGKQIHAYAAKVPSG-LDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
           A  A +E G+ +H  AA   SG ++TS+   N+I++MY KCG   +A  +F++MP K ++
Sbjct: 578 AAMATLEHGRSMHRRAA--ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLI 635

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  +I  Y  +G A EA+   ++MLL   +PD    +++L   SH+GL+E   E+F   
Sbjct: 636 SWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSS 695

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI-WQTLLSACRVHGDLE 503
             D  ++P      C+VD L R G LD A+ LI + P   +  I W TLL+AC+ +GD +
Sbjct: 696 IQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQ 755

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
            G    E +  L+  +  ++V+++N++A  G W++  R+RK+     +KK  G SW+E+ 
Sbjct: 756 RGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELS 815

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
             +H F  G+  HP   +I + L ++  RM+E  G+V      +HD++E  KEE L  HS
Sbjct: 816 GSVHEFISGESKHPKIREICEDLEKLTLRMREA-GYVPDTTNVVHDVEEGDKEEILSRHS 874

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           E+LAI    V G ++ +PG+ IRV KNLRVC DCH   K +S ++    VVRD++RFH F
Sbjct: 875 ERLAI----VFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHF 930

Query: 684 EGGVCSCGDYW 694
           + G CSCGD+W
Sbjct: 931 KHGQCSCGDFW 941



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 255/481 (53%), Gaps = 8/481 (1%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C+ +  LD+G Q+H ++V  G + +++++N L++MY KC ++  A  VFD ML R+
Sbjct: 64  ALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRD 123

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWTA++  + QNG     L    +M +  VKPN+ T  T +     L  ++ G +IH 
Sbjct: 124 VVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHH 183

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +  G E + ++GN+++ MY  CG  ++   +F  M   S++ W  MIAG    G  ++
Sbjct: 184 RIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEE 243

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
           GLL+FRKM   G   +E T+ S ++ C +L +V  G  I   ++ S  P+   T++A SL
Sbjct: 244 GLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILES--PFCSSTLLATSL 301

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y +CG L  A+ + + + Q+ V++W++++   AQ  +  EA+ L R++       + 
Sbjct: 302 ISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANK 361

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL---DTSVSNSIVDMYLKCGLIDEATEL 374
               S++   A+   + QG++IHA    +  GL   + +V NS++ MY KCG  + A  +
Sbjct: 362 VTYLSVLEACANLEALSQGREIHARV--LLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  MP K+ V+W  +I     +   ++A+ LF  M L+ +  +    L++L AC     +
Sbjct: 420 FEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDL 479

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           + +++  +R              + +V+   R G L +AK   +S+  K  +A W  +L+
Sbjct: 480 KLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVA-WSIILA 538

Query: 495 A 495
           A
Sbjct: 539 A 539



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 227/440 (51%), Gaps = 3/440 (0%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY KC  +  A  VFD +  +NV SWT +M  + QNG+ +  L LF +M     +P++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               + A      +++G QIH   + SG   N ++ NS+++MY KC  +  A ++FD M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            + +++W AM+A Y   G   + L    +M   G  P++ TF + +  C  L  +  G +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           IH  +I  G       ++  +LV  Y  CG   + + VF  + Q SV+ W+++I G +Q 
Sbjct: 181 IHHRIINEGL--EPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN 238

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               E + +FR++    ++ +     SM+ V  +   V++G+ I A   + P    T ++
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
            S++ +Y +CG++D A  L   M  ++VV W  ++T   ++G   EA+ L R+M ++   
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
            + V YL+VL AC++   + + +E  +R+     ++  +   + ++   G+ G+ + A +
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418

Query: 476 LIESMPVKPSIAIWQTLLSA 495
           + E+MP K  ++ W  +++A
Sbjct: 419 VFEAMPRKDDVS-WNAVINA 437


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/671 (33%), Positives = 351/671 (52%), Gaps = 50/671 (7%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTAL 84
           L+  +Q+H  ++K     +  +   L+     C   N    A +VFD++   +   W  +
Sbjct: 16  LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTM 75

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           +  +L + N +  +SLF QM      P + ++LS  I+A G L    NG ++H   +K G
Sbjct: 76  IRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIG 135

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
              +  V  ++I+MY+K G I  A  + D M    L+ +N ++A YV  G  +    LF 
Sbjct: 136 LGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFD 195

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M E     D  ++ + +    SLG VG                                
Sbjct: 196 RMPER----DLVSWNTMIHGHASLGDVG-------------------------------- 219

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
                 A+++FD   ++ +ISWSS+I  YA+     EA+ LF +++  ++  D   + S+
Sbjct: 220 -----TAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +    D   +  GK IH    +    +D  +  S+VDMY KCG ID +  +FN M  ++V
Sbjct: 275 LSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDV 334

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
             W+ +I G   HG  + A+  F KM+ +D++P+ V ++ VLSACSH GLV+E   YF+ 
Sbjct: 335 FAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTS 394

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +     + P+IEHY C+VD LGRAGRL EA  LI+SMP  P   +W+ LL ACR++ ++E
Sbjct: 395 MSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVE 454

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           +  E    LL L+     NYV++SNI++ A  W++   +R++ ++  ++KV G S +EVD
Sbjct: 455 IAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVD 514

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
             +H F  GD +HP ++KI ++L E+  R+K   G+       L D  E+ KE +L  HS
Sbjct: 515 NAVHEFVAGDQSHPESKKILRMLSEITARLKAN-GYAPLTASVLQDFDEKEKENALAHHS 573

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLAI   L    L+  PG  IR+ KNLRVC DCH  IK +S+  K   +VRD  RFH F
Sbjct: 574 EKLAIAFGL----LSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHF 629

Query: 684 EGGVCSCGDYW 694
             G CSC DYW
Sbjct: 630 VNGSCSCKDYW 640



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 4/185 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +++ ++  +   L  C     L  G  +H  + +     DL L   L+DMYAKCG+++ +
Sbjct: 263 NVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNS 322

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             VF+ M  R+V +W+A++ G   +G  +  L  F +M S  +KPN+ T    + A   +
Sbjct: 323 LRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHI 382

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWN 183
             V+ G   +   M   ++ +P + +   ++D+  + GR+ EA  +   MP A   I W 
Sbjct: 383 GLVDEGWT-YFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWR 441

Query: 184 AMIAG 188
           A++  
Sbjct: 442 ALLGA 446


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/532 (39%), Positives = 310/532 (58%), Gaps = 8/532 (1%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           +  A  +FD +P   ++ +N M  GY       +   LF ++   G  PD++TF S LKA
Sbjct: 71  MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C S  ++  G Q+H   I  G   S    +  +L++ Y  C  +  ARRVFD I +  V+
Sbjct: 131 CASCKALEEGRQLHCLAIKLGL--SENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVV 188

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           +++++I GYA+     EA+ LFR+L+ R+L+     + S++   A    ++ GK +H Y 
Sbjct: 189 TYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYV 248

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K        V  +++DMY KCG +D+A  +F  M V++   W+ +I  Y  HG   +AV
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAV 308

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF++M     EPD + +L +L ACSH+GLVEE  EYF  + +   + P I+HY C+VD 
Sbjct: 309 SLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDL 368

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGRAGRL+EA   I  +P++P+  +W+TLLSAC  HG++ELG+ V E +  LD  +  +Y
Sbjct: 369 LGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDY 428

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           +++SN+ A AG W +   +RKL   +G+ K+ G S VEV+  +H F+ GD  H ++ K+H
Sbjct: 429 IILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLH 488

Query: 584 QVLMEMEKRMKEELGFVYGVKYALH-DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
           Q L E+ K +K  +G+V       H D+++E KE +LR HSEKLAI   L    LN  PG
Sbjct: 489 QALDELVKELK-LVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGL----LNTPPG 543

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IRV KNLRVCGDCH   K +S I     ++RD  RFH F+ G CSC DYW
Sbjct: 544 TTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 213/423 (50%), Gaps = 13/423 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLID---MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           QL    +K     DL +    I+   +      M  A  +FD++ + ++V +  +  G+ 
Sbjct: 38  QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYA 97

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +        +LF Q+  S + P+++T  + +KA     ++E G Q+H + +K G   N  
Sbjct: 98  RTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVY 157

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V  ++I+MY+ C  ++ A R+FD +    ++T+NAMI GY      ++ L LFR++Q   
Sbjct: 158 VCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARN 217

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P + T  S L +C  LG++  G  +H ++  +GF   VK  +  +L+D Y KCG L +
Sbjct: 218 LKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVK--VDTALIDMYAKCGSLDD 275

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  VF+ +  +   +WS++I+ YA   +  +A+ LF+++R+   + D      ++   + 
Sbjct: 276 AVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSH 335

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNV-VTW 386
             LVE+G + + Y  +   G+   + +   +VD+  + G ++EA E    +P++   + W
Sbjct: 336 TGLVEEGFE-YFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILW 394

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
             +++  G HG  +    +  ++  LDD    G  Y+ + + C+ +G  E+   Y  +L 
Sbjct: 395 RTLLSACGSHGNVELGKRVIEQIFELDDSH--GGDYIILSNLCARAGRWEDVN-YVRKLM 451

Query: 446 NDK 448
           N++
Sbjct: 452 NER 454



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 159/300 (53%), Gaps = 8/300 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L+ G QLH   +K+G S ++ +   LI+MY  C EM+ A  VFDK+ E  V
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCV 187

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V++ A++ G+ +       LSLF ++ + ++KP + T+ + + +  +L +++ G  +H  
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEY 247

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K+GF     V  ++IDMY+KCG +++A  +F+ M  +    W+AMI  Y + G+  K 
Sbjct: 248 VKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKA 307

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSL 257
           + LF++M++ G  PDE TF   L AC   G V  G +  +G     G    +K    G +
Sbjct: 308 VSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHY--GCM 365

Query: 258 VDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           VD   + G L EA   +  L  + + I W +L+       N+    EL +++ E+  ++D
Sbjct: 366 VDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNV----ELGKRVIEQIFELD 421


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/649 (35%), Positives = 374/649 (57%), Gaps = 31/649 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+  Y K GE++ A  VFD M ERNVVSWTAL+ G++ NG      SLF +M      
Sbjct: 83  NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------ 136

Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P +  +S  +   G L    +++  +++ M        + +   S+I    K GR++EA 
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAR 192

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD M  +S+ITW  M+ GY      D    +F  M E  E+    ++TS L      G
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV----SWTSMLMGYVQNG 248

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            +    ++   +        VK VIA  +++    + G + +ARRVFD +++++  SW +
Sbjct: 249 RIEDAEELFEVM-------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I  + +     EA++LF  ++++ ++     L S++ V A  A +  GKQ+HA   +  
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
             +D  V++ ++ MY+KCG + ++  +F+  P K+++ W  II+GY  HGL +EA+ +F 
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421

Query: 408 KMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
           +M L    +P+ V ++A LSACS++G+VEE  + +  + +   +KP   HY+C+VD LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           AGR +EA  +I+SM V+P  A+W +LL ACR H  L++     + L+ ++ +N   Y+++
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH-FFYGGDDTHPLTEKIHQV 585
           SN++A  G W +   LRKL +++ ++K  G SW EV+ ++H F  GG ++HP  E I ++
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L E++  ++E  G+     YALHD+ EE K  SL+ HSE+LA+  AL++  L+E  G  I
Sbjct: 602 LDELDGLLREA-GYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK--LSE--GIPI 656

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RV KNLRVC DCH  IK +SK+ +   ++RDA RFH F  G CSC DYW
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 19/386 (4%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +    +I    K G ++ A  +FD+M ER+V++WT ++ G+ QN        +F    
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF---- 226

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG-NSIIDMYSKCGRI 164
              V P +  +S     S ++  V+NG       +       PV+  N++I    + G I
Sbjct: 227 --DVMPEKTEVSW---TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEI 281

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            +A R+FD M  ++  +W  +I  +   G+  + L LF  MQ+ G  P   T  S L  C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            SL S+  G Q+H  L+   F   V   +A  L+  Y+KCG LV+++ +FD    K +I 
Sbjct: 342 ASLASLHHGKQVHAQLVRCQF--DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399

Query: 285 WSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           W+S+I GYA      EA+++F ++    S + +     + +   +   +VE+G +I+   
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459

Query: 344 AKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
             V  G+   T+    +VDM  + G  +EA E+ + M V+ +   W  ++     H    
Sbjct: 460 ESV-FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLS 426
            A    +K++  ++EP+      +LS
Sbjct: 519 VAEFCAKKLI--EIEPENSGTYILLS 542



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 222/524 (42%), Gaps = 93/524 (17%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N  I   ++ G+++ A  +FD    +++ SW +++ G+  N   +    LF +M      
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P+   +S                            WN +V       Y K G I+EA ++
Sbjct: 75  PDRNIIS----------------------------WNGLVSG-----YMKNGEIDEARKV 101

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD+MP +++++W A++ GYV  G  D    LF KM E  ++    ++T  L      G +
Sbjct: 102 FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV----SWTVMLIGFLQDGRI 157

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
               +++  +           +   S++    K G + EAR +FD + ++SVI+W++++ 
Sbjct: 158 DDACKLYEMIPDK------DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVT 211

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GY Q   + +A ++F  + E++        +SM+  +     +E  +++       P   
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMPVKP--- 264

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
                N+++    + G I +A  +F+ M  +N  +W  +I  + ++G   EA+ LF  M 
Sbjct: 265 -VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323

Query: 411 LDDVEPDGVAYLAVLSACS-----------HSGLVE---ESQEYF--------------- 441
              V P     +++LS C+           H+ LV    +   Y                
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383

Query: 442 -SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV----KPSIAIWQTLLSAC 496
            S+L  D+     I  ++ I+      G  +EA  +   MP+    KP+   +   LSAC
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443

Query: 497 RVHGDLELGREVGEILLRLDGDNPV--NYVMMSNIHADAGSWNE 538
              G +E G ++ E +  + G  P+  +Y  M ++   AG +NE
Sbjct: 444 SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 66/383 (17%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P   N  I   S+ G+I+EA ++FD   +KS+ +WN+M+AGY           LF     
Sbjct: 17  PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF----- 71

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGC 266
             E+PD                                    + +I+   LV  Y+K G 
Sbjct: 72  -DEMPD------------------------------------RNIISWNGLVSGYMKNGE 94

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           + EAR+VFDL+ +++V+SW++L+ GY     +  A  LF ++ E++ +V   V+  ++G 
Sbjct: 95  IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-KVSWTVM--LIGF 151

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
             D  + +  K       K     D     S++    K G +DEA E+F+EM  ++V+TW
Sbjct: 152 LQDGRIDDACKLYEMIPDK-----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG--VAYLAVLSACSHSGLVEESQEYFSRL 444
           T ++TGYG++    +A  +F      DV P+   V++ ++L     +G +E+++E F  +
Sbjct: 207 TTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                +KP I   + ++  LG+ G + +A+ + +SM  +   A WQT++     +G  EL
Sbjct: 261 ----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVIKIHERNG-FEL 313

Query: 505 GREVGEILLRLDGDNPVNYVMMS 527
                 IL++  G  P    ++S
Sbjct: 314 EALDLFILMQKQGVRPTFPTLIS 336



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L +G Q+H  LV+  F  D+ + + L+ MY KCGE+  +  +FD+   +++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           + W +++ G+  +G  +  L +FC+M  S S KPNE T    + A      VE G++I+ 
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM 174
             M+S F   P+  +   ++DM  + GR NEA  M D M
Sbjct: 458 -SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/650 (36%), Positives = 364/650 (56%), Gaps = 34/650 (5%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI  Y K   ++ A   FD M ERNVVSWTA++ G++Q G      +LF QM      
Sbjct: 82  NGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM------ 135

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV----VGNSIIDMYSKCGRINE 166
           P +  +S  +   G++  V    +  G+     F+  PV       ++I  Y + GR+ E
Sbjct: 136 PEKNVVSWTVMLGGLIQ-VRRIDEARGL-----FDIMPVKDVVARTNMISGYCQEGRLAE 189

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +FD MP +++I+W  MI+GYV  G  D    LF  M E  E+    ++T+ L     
Sbjct: 190 ARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEV----SWTAML----- 240

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +G   GG       +    P  VK V+A  +++  + + G + +AR+VFD I +K   +W
Sbjct: 241 MGYTQGGRIEEASELFDAMP--VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTW 298

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I  Y ++    EA+ LF  ++   +Q +   L S++ V A  A ++ G+Q+HA   K
Sbjct: 299 SAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVK 358

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                D  V++ ++ MY+KCG + +A ++F+    K++V W  IITGY +HGL +EA+ +
Sbjct: 359 SQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQV 418

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F +M    +  DGV ++ VLSACS++G V+E  E F  + +   ++P+ EHY+C+VD LG
Sbjct: 419 FHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLG 478

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG +++A +LI+ MPV+    IW  LL ACR H ++ L     + LL+L+  N   Y++
Sbjct: 479 RAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYIL 538

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT-HPLTEKIHQ 584
           +SNI+A  G W +   LR+  R K + K  G SW+EV+K +H F GG  T HP    I +
Sbjct: 539 LSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMK 598

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
           +L +++  ++E  G+     + LHD+ EE K  SL  HSE+LA+   L    L    G  
Sbjct: 599 MLEKLDGMLREA-GYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGL----LKVPEGMP 653

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IRV KNLRVCGDCH  IK ++KI     ++RDA RFH F+ G CSC DYW
Sbjct: 654 IRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 16/384 (4%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++   ++I  Y + G +  A  +FD+M  RNV+SWT ++ G++QNG       LF  M 
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
               + NE + +  +        +E   ++   M +K+      V  N++I  + + G +
Sbjct: 230 ----EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA-----VVACNAMILGFGQNGEV 280

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            +A ++FD +  K   TW+AMI  Y   G+  + L LF  MQ  G   +  +  S L  C
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVC 340

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            SL S+  G Q+H  L+ S F   V   +A  L+  YVKCG LV+AR++FD    K ++ 
Sbjct: 341 ASLASLDHGRQVHAELVKSQFDSDV--FVASVLITMYVKCGDLVKARQIFDRFSPKDIVM 398

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYA 343
           W+S+I GYAQ   + EA+++F ++    +  DG     ++   +    V++G +I  +  
Sbjct: 399 WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 458

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
           +K      T     +VD+  + GL+++A +L  +MPV+ + + W  ++     H     A
Sbjct: 459 SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLA 518

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLS 426
               +K+L   +EP       +LS
Sbjct: 519 EVAAKKLL--QLEPKNAGPYILLS 540



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 208/461 (45%), Gaps = 65/461 (14%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N  I  YA+ G++  A  VFD+M ++ +VSW +++ G+ QN   +    LF +M      
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP----- 74

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
                                             E N V  N +I  Y K   ++EA + 
Sbjct: 75  ----------------------------------ERNTVSWNGLISGYVKNRMVSEARKA 100

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD MP +++++W AM+ GYV  G   +   LF +M E   +    ++T  L         
Sbjct: 101 FDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVV----SWTVML--------- 147

Query: 231 GGGTQIHGFLITSGF--PYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           GG  Q+       G      VK V+A + ++  Y + G L EAR +FD + +++VISW++
Sbjct: 148 GGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I GY Q   +  A +LF  + E++ +V    +  +MG      + E  +   A   K  
Sbjct: 208 MISGYVQNGQVDVARKLFEVMPEKN-EVSWTAM--LMGYTQGGRIEEASELFDAMPVKA- 263

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
                   N+++  + + G + +A ++F+++  K+  TW+ +I  Y + G   EA+ LF 
Sbjct: 264 ----VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFA 319

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
            M  + V+ +  + ++VLS C+    ++  ++  + L   +     +   S ++    + 
Sbjct: 320 LMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQ-FDSDVFVASVLITMYVKC 378

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           G L +A+ + +    K  I +W ++++    HG +E   +V
Sbjct: 379 GDLVKARQIFDRFSPK-DIVMWNSIITGYAQHGLVEEALQV 418



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 21/264 (7%)

Query: 247 YSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
           Y     IA  S +  Y + G +  ARRVFD +  K ++SW+S++ GY Q     EA  LF
Sbjct: 11  YCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLF 70

Query: 306 RQLRER-SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
            ++ ER ++  +G +     G   +  + E  K       +     +     ++V  Y++
Sbjct: 71  DKMPERNTVSWNGLI----SGYVKNRMVSEARKAFDTMPER-----NVVSWTAMVRGYVQ 121

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            GL+ EA  LF +MP KNVV+WTV++ G  +     EA GLF  M + DV    VA   +
Sbjct: 122 EGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDV----VARTNM 177

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           +S     G + E++E F     D+  +  +  ++ ++    + G++D A+ L E MP K 
Sbjct: 178 ISGYCQEGRLAEARELF-----DEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKN 232

Query: 485 SIAIWQTLLSACRVHGDLELGREV 508
            ++ W  +L      G +E   E+
Sbjct: 233 EVS-WTAMLMGYTQGGRIEEASEL 255



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD+G Q+H  LVK  F  D+ + + LI MY KCG++  A  +FD+  
Sbjct: 333 LISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++V W +++ G+ Q+G  +  L +F +M SS +  +  T    + A      V+ G++
Sbjct: 393 PKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLE 452

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           I    MKS +   P   +   ++D+  + G +N+A  +   MP ++  I W A++  
Sbjct: 453 IFE-SMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/567 (35%), Positives = 333/567 (58%), Gaps = 3/567 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  LVK G   D+++ + L+ MYAKC     A  +F++M E++V  W  ++  + Q
Sbjct: 125 GKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +GN K  L  F  M     +PN  T++T I +   L  +  GM+IH   + SGF  +  +
Sbjct: 185 SGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++++DMY KCG +  A  +F+ MP K+++ WN+MI+GY L G S   + LF++M   G 
Sbjct: 245 SSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGV 304

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P   T +S +  C     +  G  +HG+ I +     V   I  SL+D Y KCG +  A
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDV--FINSSLMDLYFKCGKVELA 362

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             +F LI +  V+SW+ +I GY  E  L EA+ LF ++R+  ++ D    +S++   +  
Sbjct: 363 ENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQL 422

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +E+G++IH    +     +  V  +++DMY KCG +DEA  +F  +P +++V+WT +I
Sbjct: 423 AALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T YG HG A  A+ LF +ML  +++PD V +LA+LSAC H+GLV+E   YF+++ N   +
Sbjct: 483 TAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGI 542

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACRVHGDLELGREVG 509
            PR+EHYSC++D LGRAGRL EA  +++  P ++  + +  TL SACR+H +++LG E+ 
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIA 602

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             L+  D D+   Y+++SN++A A  W+E   +R   +  GLKK  G SW+E++++I  F
Sbjct: 603 RTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPF 662

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           +  D++H   E + + L  +   M++E
Sbjct: 663 FVEDNSHLHLELVFKCLSYLSDHMEDE 689



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 267/500 (53%), Gaps = 6/500 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           + ++L   LR C  +  L  G  +H  +V +G   D+ L  +LI++Y  C   + A  VF
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61

Query: 71  DKMLERNVVS-WTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSS 128
           D M     +S W  LM G+ +N      L LF ++     +KP+ +T  + +KA G L  
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G  IH   +K+G   + VVG+S++ MY+KC    +A  +F+ MP K +  WN +I+ 
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISC 181

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y  +G   + L  F  M+  G  P+  T T+ + +C  L  +  G +IH  LI SGF   
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF--L 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           + + I+ +LVD Y KCG L  A  VF+ + +K+V++W+S+I GY  + +    ++LF+++
Sbjct: 240 LDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRM 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++     LSS++ V +  A + +GK +H Y  +     D  +++S++D+Y KCG +
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A  +F  +P   VV+W V+I+GY   G   EA+GLF +M    VEPD + + +VL+AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S    +E+ +E    L  +K++         ++D   + G +DEA ++ + +P K  +  
Sbjct: 420 SQLAALEKGEE-IHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVS 477

Query: 489 WQTLLSACRVHGDLELGREV 508
           W ++++A   HG   +  E+
Sbjct: 478 WTSMITAYGSHGQAYVALEL 497



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 202/367 (55%), Gaps = 5/367 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  ++  C++ L L+ G+++H  L+  GF  D  +++ L+DMY KCG +  A  VF++M 
Sbjct: 210 ITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMP 269

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++ VV+W +++ G+   G++ +C+ LF +M +  VKP   TLS+ I      + +  G  
Sbjct: 270 KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF 329

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +++  + +  + +S++D+Y KCG++  A  +F ++P   +++WN MI+GYV  G 
Sbjct: 330 VHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGK 389

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +M++    PD  TFTS L AC  L ++  G +IH  +I      +   V+ 
Sbjct: 390 LFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNN--EVVM 447

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G+L+D Y KCG + EA  VF  + ++ ++SW+S+I  Y        A+ELF ++ + +++
Sbjct: 448 GALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMK 507

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
            D     +++       LV++G         V  G+   V +   ++D+  + G + EA 
Sbjct: 508 PDRVTFLAILSACGHAGLVDEGCYYFNQMVNV-YGIIPRVEHYSCLIDLLGRAGRLHEAY 566

Query: 373 ELFNEMP 379
           E+  + P
Sbjct: 567 EILQQNP 573


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/651 (35%), Positives = 360/651 (55%), Gaps = 44/651 (6%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A +VF+ + E N + W  +  G   + +  + L L+  M S  + PN FT    +K+   
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR---------------------- 163
             + + G QIHG  +K GF+ +  V  S+I MY++ GR                      
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 164 ---------INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDE 214
                    I  A +MFD +P K +++WNAMI+GY   G   K L LF++M +    PDE
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T  + + AC   GS+  G Q+H ++   GF  ++K  I  +L+D Y KCG +  A  + 
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLK--IVNALIDLYSKCGEVETACELL 265

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           + +  K VISW++LI GY       EA+ LF+++       +   + S++   A    ++
Sbjct: 266 EGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325

Query: 335 QGKQIHAYAAKVPSGL----DTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVI 389
            G+ IH Y  K   G+     +S+  S++DMY KCG ID A ++ +     +++ TW  +
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I G+  HG A  A  +F +M  + +EPD + ++ +LSACSHSG+++  +  F  +  D  
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P++EHY C++D LG +G   EA+ +I +MP++P   IW +LL AC++HG+LELG    
Sbjct: 446 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 505

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL-KKVAGRSWVEVDKEIHF 568
           + L++++ +NP +YV++SNI+A AG WNE  ++R L   KG+ KKV G S +E+D  +H 
Sbjct: 506 KKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHE 565

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD  HP   +I+ +L EME  ++E  GFV      L +++EE KE +LR HSEKLAI
Sbjct: 566 FIIGDKLHPQNREIYGMLEEMEVLLEEA-GFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 624

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
              L+    + +PG  + + KNLRVC +CHE  K +SKI K   + RD TR
Sbjct: 625 AFGLI----STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 234/488 (47%), Gaps = 49/488 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+K+     G Q+HG ++K+GF  DL ++  LI MYA+ G +  A  VFD+   R+V
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141

Query: 79  VS-------------------------------WTALMCGFLQNGNAKACLSLFCQMGSS 107
           VS                               W A++ G+ + GN K  L LF +M  +
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           +VKP+E T++T + A     S+E G Q+H      GF  N  + N++ID+YSKCG +  A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             + + +  K +I+WN +I GY       + LLLF++M   GE P++ T  S L AC  L
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321

Query: 228 GSVGGGTQIHGFLIT--SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVIS 284
           G++  G  IH ++     G   +  + +  SL+D Y KCG +  A +V D     +S+ +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I G+A       A ++F ++R+  ++ D      ++   +   +++ G+ I     
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441

Query: 345 KVPSGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           +     D +++  +      +D+    GL  EA E+ N MP++ + V W  ++     HG
Sbjct: 442 Q-----DYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             +      +K++   +EP+      +LS    +            L NDK MK ++   
Sbjct: 497 NLELGESFAKKLI--KIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGC 554

Query: 458 SCI-VDSL 464
           S I +DS+
Sbjct: 555 SSIEIDSV 562



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 17/290 (5%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +   +A  +  C+++  ++ G Q+H  +   GF  +L + N LID+Y+KCGE+  AC + 
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           + +  ++V+SW  L+ G+      K  L LF +M  S   PN+ T+ + + A   L +++
Sbjct: 266 EGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325

Query: 131 NGMQIHGMCMK--SGFEWNPVVGN------SIIDMYSKCGRINEAARMFDVMP-AKSLIT 181
            G  IH    K   G     VV N      S+IDMY+KCG I+ A ++ D     +SL T
Sbjct: 326 IGRWIHVYIDKKLKGV----VVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WNAMI G+ + G ++    +F +M+++G  PD+ TF   L AC   G +  G  I   + 
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM- 440

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLI 289
              +  + K    G ++D     G   EA  + +   +E   VI W SL+
Sbjct: 441 RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI-WCSLL 489


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/561 (36%), Positives = 321/561 (57%), Gaps = 7/561 (1%)

Query: 134  QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            Q+H      G   N +V N ++  YS    +++A  +FD M  +  ++W+ M+ G+   G
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 194  YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                    FR++   G  PD +T    ++AC  L ++  G  IH   I   F   +   +
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH--IVYKFGLDLDHFV 873

Query: 254  AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              +LVD Y KC  + +AR +FD + ++ +++W+ +I GYA+  N  E++ LF ++RE  +
Sbjct: 874  CAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGV 933

Query: 314  QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
              D   + +++   A    + + + I  Y  +    LD  +  +++DM+ KCG ++ A E
Sbjct: 934  VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 993

Query: 374  LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            +F+ M  KNV++W+ +I  YG HG  ++A+ LF  ML   + P+ +  +++L ACSH+GL
Sbjct: 994  IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 1053

Query: 434  VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            VEE   +FS +  D  ++  ++HY+C+VD LGRAGRLDEA  LI SM  +    +W   L
Sbjct: 1054 VEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFL 1113

Query: 494  SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
             ACR H D+ L  +    LL L   NP +Y+++SNI+A+AG W +  ++R L   + LKK
Sbjct: 1114 GACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKK 1173

Query: 554  VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
            + G +W+EVD + H F  GD THP +++I+++L  +  ++ E +G+V    + LHD+ EE
Sbjct: 1174 IPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL-ELVGYVPDTNFVLHDVDEE 1232

Query: 614  SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
             K   L  HSEKLAI   L+       P   IR+ KNLRVCGDCH F K +S I   V +
Sbjct: 1233 LKIGILYTHSEKLAIAFGLI-ATPEHTP---IRIIKNLRVCGDCHTFCKLVSAITGRVII 1288

Query: 674  VRDATRFHRFEGGVCSCGDYW 694
            VRDA RFH F+ G CSCGDYW
Sbjct: 1289 VRDANRFHHFKEGACSCGDYW 1309



 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 183/519 (35%), Positives = 292/519 (56%), Gaps = 7/519 (1%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H      G   N VV N +I  YS    +++A  +FD M  +  ++W+ M+ G+   G
Sbjct: 80  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                   FR++   G  PD +T    ++AC  L ++  G  IH   I   F   +   +
Sbjct: 140 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH--IVYKFGLDLDHFV 197

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD YVKC  + +AR +FD ++++ +++W+ +I GYA+     E++ LF ++RE  +
Sbjct: 198 CAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV 257

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   + +++   A    + + + I  Y  +    LD  +  +++DMY KCG ++ A E
Sbjct: 258 VPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESARE 317

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ M  KNV++W+ +I  YG HG  ++A+ LF  ML   + PD +   ++L ACSH+GL
Sbjct: 318 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGL 377

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           VEE   +FS +  D  ++  ++HY+C+VD LGRAGRLDEA  LI+SM ++    +W   L
Sbjct: 378 VEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFL 437

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            ACR H D+ L  +    LL L   NP +YV++SNI+A+AG W +  ++R L   + LKK
Sbjct: 438 GACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKK 497

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G +W+EVD + H F  GD THP +++I+++L  +  ++ E +G+V    + LHD+ EE
Sbjct: 498 TPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKL-ELVGYVPDTNFVLHDVDEE 556

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
            K   L  HSEKLAI   L+       P   IR+ KNLR
Sbjct: 557 LKIGILYTHSEKLAIAFGLI-ATPEHTP---IRIIKNLR 591



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 185/355 (52%), Gaps = 11/355 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H      G   ++++ N LI  Y+    ++ A  +FD M  R+ VSW+ ++ GF + G
Sbjct: 80  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +   C   F ++     +P+ +TL   I+A   L +++ G  IH +  K G + +  V  
Sbjct: 140 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 199

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMY KC  I +A  +FD M  + L+TW  MI GY   G +++ L+LF KM+E G +P
Sbjct: 200 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 259

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D+    + + AC  LG++     I  ++    F   V  ++  +++D Y KCGC+  AR 
Sbjct: 260 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV--ILGTAMIDMYAKCGCVESARE 317

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD +E+K+VISWS++I  Y       +A++LF  +    +  D   L+S++   +   L
Sbjct: 318 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGL 377

Query: 333 VEQGKQIHA-----YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           VE+G +  +     Y+ +     D      +VD+  + G +DEA +L   M ++ 
Sbjct: 378 VEEGLRFFSSMWEDYSVRT----DVKHYTCVVDLLGRAGRLDEALKLIKSMTIEK 428



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 3/347 (0%)

Query: 33   QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
            Q+H      G   +L++ N L+  Y+    ++ A  +FD M  R+ VSW+ ++ GF + G
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 93   NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   C   F ++     +P+ +TL   I+A   L +++ G  IH +  K G + +  V  
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 153  SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +++DMY KC  I +A  +FD M  + L+TW  MI GY   G +++ L+LF KM+E G +P
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP 935

Query: 213  DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            D+    + + AC  LG++     I  ++    F   V  ++  +++D + KCGC+  AR 
Sbjct: 936  DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV--ILGTAMIDMHAKCGCVESARE 993

Query: 273  VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            +FD +E+K+VISWS++I  Y       +A++LF  +    +  +   L S++   +   L
Sbjct: 994  IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 1053

Query: 333  VEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            VE+G +  +   +  S   D      +VD+  + G +DEA +L   M
Sbjct: 1054 VEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 5/257 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C     L  G  +H  + K G   D  +   L+DMY KC E+  A  +FDKM ER++
Sbjct: 167 IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDL 226

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+WT ++ G+ + G A   L LF +M    V P++  + T + A   L ++     I   
Sbjct: 227 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 286

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             +  F+ + ++G ++IDMY+KCG +  A  +FD M  K++I+W+AMIA Y   G   K 
Sbjct: 287 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 346

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           L LF  M   G +PD+ T  S L AC   G V  G +   F  +    YSV+T +     
Sbjct: 347 LDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLR---FFSSMWEDYSVRTDVKHYTC 403

Query: 257 LVDFYVKCGCLVEARRV 273
           +VD   + G L EA ++
Sbjct: 404 VVDLLGRAGRLDEALKL 420



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 19   LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
            +R C     L  G  +H  + K G   D  +   L+DMY KC E+  A  +FDKM ER++
Sbjct: 843  IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDL 902

Query: 79   VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            V+WT ++ G+ + GNA   L LF +M    V P++  + T + A   L ++     I   
Sbjct: 903  VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 962

Query: 139  CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              +  F+ + ++G ++IDM++KCG +  A  +FD M  K++I+W+AMIA Y   G   K 
Sbjct: 963  IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 1022

Query: 199  LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
            L LF  M   G +P++ T  S L AC   G V  G +   F       YSV+  +     
Sbjct: 1023 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR---FFSXMWEDYSVRXDVKHYTC 1079

Query: 257  LVDFYVKCGCLVEARRV 273
            +VD   + G L EA ++
Sbjct: 1080 VVDLLGRAGRLDEALKL 1096


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/683 (32%), Positives = 353/683 (51%), Gaps = 73/683 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++K+GF  D+ + N LI+ ++ C  M  AC VF++    + VSW +++ G+++ G
Sbjct: 234 QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 293

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N +    ++ QM   S+                                       +  N
Sbjct: 294 NVEEAKHIYHQMPERSI---------------------------------------IASN 314

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I ++   G + EA ++FD M  K ++TW+A+IA +      ++ +  F  M + G + 
Sbjct: 315 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV 374

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF--------------------------- 245
           DE    S L AC +L  V  G  IH   +  G                            
Sbjct: 375 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 434

Query: 246 --PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
              Y +  +   S++  Y+KC  +  A+ +FD + +K V+SWSS+I GYAQ +   E + 
Sbjct: 435 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 494

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF++++    + D   L S++   A  A +EQGK +HAY  +    ++  +  +++DMY+
Sbjct: 495 LFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYM 554

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG ++ A E+F  M  K + TW  +I G   +GL + ++ +F  M    V P+ + ++ 
Sbjct: 555 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 614

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VL AC H GLV+E Q +F  + +D +++P ++HY C+VD LGRAG+L EA+ L+  MP+ 
Sbjct: 615 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 674

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P +A W  LL AC+ HGD E+GR VG  L+ L  D+   +V++SNI+A  G W++   +R
Sbjct: 675 PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIR 734

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
            +     + K+ G S +E +  IH F  GD THP  + I  +L+EM  ++K E G+   +
Sbjct: 735 GMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLE-GYTPDI 793

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
              L D+ EE KE +L  HSEKLAI   L+    N  P   IR+ KNLR+C DCH   K 
Sbjct: 794 NEVLLDVDEEEKESTLFRHSEKLAIAFGLI----NISPPTPIRIMKNLRICNDCHTAAKL 849

Query: 664 LSKILKLVFVVRDATRFHRFEGG 686
           +SK      VVRD  RFH FE G
Sbjct: 850 ISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 33/333 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM-------------- 63
           +L  C+  L+++ G  +H   +K+G    + L N LI MY+KCG++              
Sbjct: 382 ALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLD 441

Query: 64  -----------------NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
                            + A A+FD M E++VVSW++++ G+ QN      L+LF +M  
Sbjct: 442 LISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQM 501

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           S  KP+E TL + I A   L+++E G  +H    ++G   N ++G ++IDMY KCG +  
Sbjct: 502 SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVET 561

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  M  K + TWNA+I G  + G  +  L +F  M++    P+E TF   L AC  
Sbjct: 562 ALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRH 621

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISW 285
           +G V  G Q H + +             G +VD   + G L EA  + + +     V +W
Sbjct: 622 MGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 680

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
            +L+    +  +      + R+L E     DGF
Sbjct: 681 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGF 713



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 203/449 (45%), Gaps = 76/449 (16%)

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            ++Q  +     +L+  M S+ +  + +T    I+A  +  S     Q+H   +K GF+ 
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V N++I+ +S C  + +A R+F+       ++WN+++AGY+  G  ++   ++ +M 
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCG 265
           E                                          +++IA  S++  +   G
Sbjct: 307 E------------------------------------------RSIIASNSMIVLFGMRG 324

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +VEA ++FD + +K +++WS+LI  + Q E   EA+  F  + +  + VD  V  S + 
Sbjct: 325 LVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALS 384

Query: 326 VFADFALVEQGKQIHAYAAKVPSG-------------------------------LDTSV 354
             A+  +V  GK IH+ + K+ +                                LD   
Sbjct: 385 ACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLIS 444

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            NS++  YLKC L+D A  +F+ MP K+VV+W+ +I+GY ++ L  E + LF++M +   
Sbjct: 445 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 504

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +PD    ++V+SAC+    +E+ + +         +   +   + ++D   + G ++ A 
Sbjct: 505 KPDETTLVSVISACARLAALEQGK-WVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 563

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            +   M ++  I+ W  L+    ++G +E
Sbjct: 564 EVFYGM-IEKGISTWNALILGLAMNGLVE 591



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 4/200 (2%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +   L   +  C++   L+ G  +H  + + G + +++L   LIDMY KCG +  A  VF
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
             M+E+ + +W AL+ G   NG  ++ L +F  M    V PNE T    + A   +  V+
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIA 187
            G Q H   M    +  P V +   ++D+  + G++ EA  + + MP    + TW A++ 
Sbjct: 627 EG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 685

Query: 188 GYVLAGYSDKGLLLFRKMQE 207
                G S+ G  + RK+ E
Sbjct: 686 ACKKHGDSEMGRRVGRKLIE 705


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/590 (36%), Positives = 339/590 (57%), Gaps = 3/590 (0%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  LA ++  CS    L+ G Q+HG   +     D  + N LID+Y KC  ++ A  +F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D M  RN+VSWT ++ G++QN      +++F  M  +  +P+ F  ++ + + G L+++ 
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIH   +K+  E +  V N++IDMY+KC  + EA  +FD +     I++NAMI GY 
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                 + + +F++M+     P   TF S L    S  ++    QIHG +I SG   S+ 
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSG--TSLD 457

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              A +L+D Y KC  + +A+ VF+++  K ++ W+S+I G+AQ E   EA++LF QL  
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             +  + F   +++ V +  A +  G+Q HA+  K     D  VSN+++DMY KCG I E
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKE 577

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
              LF     ++V+ W  +IT Y +HG A+EA+ +FR M   +VEP+ V ++ VLSAC+H
Sbjct: 578 GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAH 637

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +G V E   +F+ + ++  ++P IEHY+ +V+  GR+G+L  AK  IE MP+KP+ A+W+
Sbjct: 638 AGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWR 697

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LLSAC + G+ E+GR   E+ L  D  +   YV++SNI+A  G W +   LR+   S G
Sbjct: 698 SLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSG 757

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
             K  G SW+EV KE+H F      HP  E I+ VL E+   +K  LG+V
Sbjct: 758 TVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIK-NLGYV 806



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 161/517 (31%), Positives = 280/517 (54%), Gaps = 20/517 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  LR C+++  +  G Q+HG  VK+    ++ +   LI++YAK G M+ A  VF  + 
Sbjct: 123 LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALP 182

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R  V+W  ++ G+ Q G     L LF +MG   V+P+ F L++ + A   L  +E G Q
Sbjct: 183 VRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQ 242

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG   +S  E +  V N +ID+Y KC R++ A ++FD M  ++L++W  MI+GY+   +
Sbjct: 243 IHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSF 302

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           + + + +F  M + G  PD F  TS L +CGSL ++  G QIH  +I +         + 
Sbjct: 303 NAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADL--EADEYVK 360

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KC  L EAR VFD + +   IS++++I GY++  +LAEA+ +F+++R  SL+
Sbjct: 361 NALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLR 420

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                  S++GV +    +E  KQIH    K  + LD   +++++D+Y KC L+++A  +
Sbjct: 421 PSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTV 480

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN +  K++V W  +I G+ ++   +EA+ LF ++LL  + P+   ++A+++  S    +
Sbjct: 481 FNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASM 540

Query: 435 EESQEYFSRLC-----NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
              Q++ + +      ND  +       + ++D   + G + E + L ES      +  W
Sbjct: 541 FHGQQFHAWIIKAGVDNDPHVS------NALIDMYAKCGFIKEGRMLFEST-CGEDVICW 593

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPV--NYV 524
            ++++    HG  E   +V     RL G+  V  NYV
Sbjct: 594 NSMITTYAQHGHAEEALQV----FRLMGEAEVEPNYV 626



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 260/499 (52%), Gaps = 14/499 (2%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H      G   DL L N L+  Y+  G +  A  +FD+M  RN+VSW +++  + Q+G 
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 94  AKACLSLFCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
               +SLF     +S + PNEF L++ ++A     +V  G Q+HG+ +K   + N  VG 
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++I++Y+K G ++EA  +F  +P ++ +TWN +I GY   G     L LF +M   G  P
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F   S + AC +LG + GG QIHG+   S       T +   L+D Y KC  L  AR+
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSA--TETDTSVINVLIDLYCKCSRLSAARK 277

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD +E ++++SW+++I GY Q    AEA+ +F  + +   Q DGF  +S++      A 
Sbjct: 278 LFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAA 337

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           + QG+QIHA+  K     D  V N+++DMY KC  + EA  +F+ +   + +++  +I G
Sbjct: 338 IWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEG 397

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           Y K+    EAV +F++M    + P  + ++++L   S    +E S++    +    +   
Sbjct: 398 YSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLII---KSGT 454

Query: 453 RIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            ++ Y  S ++D   +   +++AK +   +  K  + IW +++     H   E G E  +
Sbjct: 455 SLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK-DMVIWNSMIFG---HAQNEQGEEAIK 510

Query: 511 IL--LRLDGDNPVNYVMMS 527
           +   L L G  P  +  ++
Sbjct: 511 LFNQLLLSGMAPNEFTFVA 529



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 2/285 (0%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           FSL          L   S  L ++   Q+HG ++K G S DL   + LID+Y+KC  +N 
Sbjct: 417 FSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVND 476

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VF+ +  +++V W +++ G  QN   +  + LF Q+  S + PNEFT    +  +  
Sbjct: 477 AKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVAST 536

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L+S+ +G Q H   +K+G + +P V N++IDMY+KCG I E   +F+    + +I WN+M
Sbjct: 537 LASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSM 596

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I  Y   G++++ L +FR M E    P+  TF   L AC   G VG G   H   + S +
Sbjct: 597 ITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNY 655

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
                     S+V+ + + G L  A+   + +  K   + W SL+
Sbjct: 656 DIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLL 700


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/674 (33%), Positives = 369/674 (54%), Gaps = 10/674 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C        G ++H  +++ GF+ ++ + N L+ MYAKCG++  A  VFD M   + 
Sbjct: 202 LRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDC 261

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW A++ G  +NG   A L LF  M    V+PN  T+++   ASG+LS +    ++HG+
Sbjct: 262 ISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGL 321

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  +    NS+I MY+  G + +A  +F  M  +  ++W AMI+GY   G+ DK 
Sbjct: 322 AVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKA 381

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L ++  M+ +   PD+ T  S L AC  LGS+  G ++H    + GF   V  V+  +L+
Sbjct: 382 LEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYV--VVTNALL 439

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y K   + +A  VF  + +K V+SWSS+I G+       EA+  FR +    ++ +  
Sbjct: 440 EMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSV 498

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
              + +   A    +  GK+IHA+  +     +  + N+++D+Y+KCG    A   F   
Sbjct: 499 TFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAH 558

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+VV+W ++I G+  HG  + A+  F +M+     PD V ++A+L ACS  G+V E  
Sbjct: 559 GAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW 618

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E F  + +   + P ++HY+C+VD L R G+L EA N I  MP+ P  A+W  LL+ CR+
Sbjct: 619 ELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRI 678

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H  +ELG    + +L L+ ++   +V++ +++ADAG W++  R+RK  R KGL   +G S
Sbjct: 679 HRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCS 738

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
           WVEV   +H F   D++HP   +I+ VL  + +RMK   G      ++  D  +  K++ 
Sbjct: 739 WVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKAS-GCAPVESHSPED--KVLKDDI 795

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
              HSE+LA+   L+    N  PG  I V KN   C  CH  +K +S I++   +VRD+ 
Sbjct: 796 FCGHSERLAVAFGLI----NTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIVRDSK 851

Query: 679 RFHRFEGGVCSCGD 692
           + H F+ G CSCGD
Sbjct: 852 QVHHFKDGSCSCGD 865



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 198/378 (52%), Gaps = 3/378 (0%)

Query: 45  FDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM 104
           F L L N ++ M  + GE   A  VF KM ER+V SW  ++ G+ + G  +  L L+ +M
Sbjct: 127 FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRM 186

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
             + V+P+ +T    +++ G +     G ++H   ++ GF     V N+++ MY+KCG +
Sbjct: 187 MWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDV 246

Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
             A ++FD M     I+WNAMIAG+   G  + GL LF  M +    P+  T TS   A 
Sbjct: 247 VAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVAS 306

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
           G L  +    ++HG  +  GF   V      SL+  Y   G + +AR VF  ++ +  +S
Sbjct: 307 GLLSDITFAKEMHGLAVKRGFATDV--AFCNSLIQMYASLGMMGQARTVFSRMDTRDAMS 364

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W+++I GY +     +A+E++  +   ++  D   ++S +   A    ++ G ++H  A 
Sbjct: 365 WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAE 424

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
                    V+N++++MY K   ID+A E+F  MP K+VV+W+ +I G+  +    EA+ 
Sbjct: 425 SKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALY 484

Query: 405 LFRKMLLDDVEPDGVAYL 422
            FR ML  DV+P+ V ++
Sbjct: 485 YFRHMLA-DVKPNSVTFI 501



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 2/182 (1%)

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           VE G +  A+A    +     + N+++ M ++ G    A  +F +MP ++V +W V++ G
Sbjct: 110 VEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGG 169

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YGK GL +EA+ L+ +M+   V PD   +  VL +C         +E  + +        
Sbjct: 170 YGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FAE 228

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++  + ++    + G +  A+ + +SM V   I+ W  +++    +G+   G E+   +
Sbjct: 229 EVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCIS-WNAMIAGHFENGECNAGLELFLTM 287

Query: 513 LR 514
           L+
Sbjct: 288 LQ 289


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/621 (35%), Positives = 348/621 (56%), Gaps = 10/621 (1%)

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN-GMQI 135
            VVS+TA + G  Q+G     LS F  M    ++PN+FT  +  KA+         G QI
Sbjct: 81  TVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQI 140

Query: 136 HGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           H + ++ G+   +P V  + +DMY K GR+  A  +F  MP ++++ WNA++   VL G 
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGR 200

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + +  +  ++E G +P+  +  +   AC     +  G Q HGF++  GF   V  +  
Sbjct: 201 PLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVL-- 258

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S+VDFY KC C  +AR VFD +  ++ +SW S++  YAQ     EA   +   R    +
Sbjct: 259 NSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEE 318

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              F++SS +   A    +  G+ +HA A +     +  V++++VDMY KCG +++A ++
Sbjct: 319 PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQI 378

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGL 433
           F E P +N+VTW  +I GY   G A+ A+ +F  M+   +  P+ +  + V+++CS  GL
Sbjct: 379 FYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGL 438

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            ++  E F  +     ++PR EHY+C+VD LGRAG  ++A  +I+ MP++PSI++W  LL
Sbjct: 439 TKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL 498

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            AC++HG  ELGR   E L  LD  +  N+V++SN+ A AG W E   +RK  ++ G+KK
Sbjct: 499 GACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKK 558

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SWV     +H F   D  H +  +I  +L ++ K+M+   G++   +Y+L+D++EE
Sbjct: 559 DPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAA-GYMPDTQYSLYDLEEE 617

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KE  +  HSEKLA+   L+       PG  IR+ KNLR+C DCH   K +S I+    +
Sbjct: 618 EKESEVFQHSEKLALAFGLI----CIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREII 673

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD  RFH F+   CSCGDYW
Sbjct: 674 VRDNNRFHHFKQYQCSCGDYW 694



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 3/270 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+  + L  G Q HG +VK GF  D+ + N ++D Y KC     A AVFD M  RN VSW
Sbjct: 230 CAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSW 289

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            +++  + QNG  +   + +     S  +P +F +S+ +     L  +  G  +H + ++
Sbjct: 290 CSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVR 349

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S  + N  V ++++DMY KCG + +A ++F   P ++L+TWNAMI GY   G +   LL+
Sbjct: 350 SCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLV 409

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F  M   GE  P+  T  + + +C   G    G ++    +   F    +T     +VD 
Sbjct: 410 FDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE-TMRERFGIEPRTEHYACVVDL 468

Query: 261 YVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
             + G   +A  V   +  +  IS W +L+
Sbjct: 469 LGRAGMEEQAYEVIQGMPMRPSISVWGALL 498



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 15/389 (3%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +P +   ++++YSK      AA      P  +++++ A I+G    G     L  F  M 
Sbjct: 50  SPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGML 109

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGG-GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
             G  P++FTF S  KA  S       G QIH   I  G+   V   ++ + +D Y K G
Sbjct: 110 RLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGY-LPVDPFVSCAALDMYFKTG 168

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L  AR +F  +  ++V++W++++     +    E +E +  LRE     +     +   
Sbjct: 169 RLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFN 228

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A    +  G+Q H +  K    +D SV NS+VD Y KC    +A  +F+ M V+N V+
Sbjct: 229 ACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVS 288

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----HSGLVEESQEY 440
           W  ++  Y ++G  +EA   +        EP      + L+ C+     H G    +   
Sbjct: 289 WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAV 348

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             R C D      I   S +VD  G+ G +++A+ +    P + ++  W  ++      G
Sbjct: 349 --RSCIDA----NIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAMIGGYAHIG 401

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNI 529
           D +    V + ++R  G+   NY+ + N+
Sbjct: 402 DAQNALLVFDDMIR-SGETAPNYITLVNV 429



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L  C+  L L  G  LH   V+     ++ + + L+DMY KCG +  A  +F +  
Sbjct: 324 VSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP 383

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           +RN+V+W A++ G+   G+A+  L +F  M  S    PN  TL   I +       ++G 
Sbjct: 384 QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY 443

Query: 134 QIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYV 190
           ++    M+  F   P   +   ++D+  + G   +A  +   MP +  I+ W A++    
Sbjct: 444 ELFET-MRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACK 502

Query: 191 LAGYSDKGLLLFRKMQE 207
           + G ++ G +   K+ E
Sbjct: 503 MHGKTELGRIAAEKLFE 519



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 3/161 (1%)

Query: 336 GKQIHAYAAK-VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           G+  HA A + +   L   +   +V++Y K  L   A       P   VV++T  I+G  
Sbjct: 34  GRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAA 93

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +HG    A+  F  ML   + P+   + +   A + +            L       P  
Sbjct: 94  QHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVD 153

Query: 455 EHYSC-IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              SC  +D   + GRL  A++L   MP +  +A W  +++
Sbjct: 154 PFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVA-WNAVMT 193


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/667 (34%), Positives = 365/667 (54%), Gaps = 54/667 (8%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGF 88
           G+  H  ++K+G   D  + N +IDMYA+ G +  A  VFD++   ER V  W A++ G+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            +  +      LF       V P                                 E N 
Sbjct: 174 WKWESEGQAQWLF------DVMP---------------------------------ERNV 194

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +   +++  Y+K   +  A R FD MP +S+++WNAM++GY   G +++ L LF +M   
Sbjct: 195 ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNA 254

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  PDE T+ + + AC S G       +   L        +   +  +L+D Y K G L 
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRI--QLNCFVRTALLDMYAKFGDLD 312

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVF 327
            AR++F+ +  ++V++W+S+I GYAQ    A A+ELF+++   + L  D   + S++   
Sbjct: 313 SARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 372

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
                +E G  +  +  +    L  S  N+++ MY +CG +++A  +F EM  ++VV++ 
Sbjct: 373 GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 432

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I+G+  HG   EA+ L   M    +EPD V ++ VL+ACSH+GL+EE ++ F  + + 
Sbjct: 433 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD- 491

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
               P I+HY+C+VD LGR G L++AK  +E MP++P   ++ +LL+A R+H  +ELG  
Sbjct: 492 ----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL 547

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
               L  L+ DN  N++++SNI+A AG W + ER+R+  +  G+KK  G SWVE   ++H
Sbjct: 548 AANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLH 607

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   D +H  ++ I+Q+L+E+ K+M+E  G++      L D++EE KEE +  HSEKLA
Sbjct: 608 KFIVADRSHERSDDIYQLLIELRKKMREA-GYIADKSCVLRDVEEEEKEEIVGTHSEKLA 666

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I  AL    L  + G VIRV KNLRVC DCH  IK +SK+   V +VRD  RFH F  G+
Sbjct: 667 ICYAL----LVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGL 722

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 723 CSCKDYW 729



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 180/402 (44%), Gaps = 86/402 (21%)

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F+     ++  + +M+  Y       K +L++ +MQ  G  PD F +   +K+ G+   
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT--- 112

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-------------- 275
             GG   H  ++  G  +     +  +++D Y + G +  AR+VFD              
Sbjct: 113 --GGIGFHAHVLKLG--HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNA 168

Query: 276 -------------------LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
                              ++ +++VI+W++++ GYA+ ++L  A   F  + ERS+   
Sbjct: 169 MVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV--- 225

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS----------------------- 353
               ++M+  +A   L E+  ++  +   V +G++                         
Sbjct: 226 -VSWNAMLSGYAQNGLAEEALRL--FDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 354 --------------VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
                         V  +++DMY K G +D A +LFN MP +NVVTW  +I GY ++G +
Sbjct: 283 VRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQS 342

Query: 400 KEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
             A+ LF++M+    + PD V  ++V+SAC H G +E    +  R   + ++K  I  ++
Sbjct: 343 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGN-WVVRFLTENQIKLSISGHN 401

Query: 459 CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++    R G +++AK + + M  +  ++ + TL+S    HG
Sbjct: 402 AMIFMYSRCGSMEDAKRVFQEMATRDVVS-YNTLISGFAAHG 442


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/586 (36%), Positives = 341/586 (58%), Gaps = 9/586 (1%)

Query: 111 PNEFTLSTNIKASGVLS-SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           PN +   T++  S V S S+  G Q+HG  + SG   + V+   ++D+Y+ CG +  A R
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD MP +++  WN +I  Y   G  +  + L+R M ++G  PD FT+   LKAC +L  
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G ++H  ++  G  +     +   LVD Y KCGC+ +AR VFD I  +  + W+S+I
Sbjct: 179 LETGREVHERVL--GTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
             Y Q     EA+ L R +    +      L S +   AD A + +G+++H +  +    
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
               +  S+VDMY K G +  A  LF ++  + +V+W  +I GYG HG   EA+ LF KM
Sbjct: 297 RQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356

Query: 410 LLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
            ++  V PD + ++ VLSAC+H G+V+E++E+F  + +   +KP ++H++C+VD LG AG
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAG 416

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           R +EA +LI+ MP++P   IW  LL+ C++H ++ELG    + L+ L+ ++  NYV++SN
Sbjct: 417 RFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSN 476

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+A +G W +  R+RKL  ++GLKK+ G SW+E+  + H F  GD +HP + +I++ L  
Sbjct: 477 IYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELER 536

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +E  M +  G++       HD+ ++ K   +R HSE+LAI   L+    +   G  + V 
Sbjct: 537 LEGLMSDA-GYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLI----STPSGTKLLVT 591

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +S+I++   ++RD  R+H F  G CSC DYW
Sbjct: 592 KNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 205/412 (49%), Gaps = 9/412 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C  +  L  G QLHG L+  G   D +L   L+D+YA CG +  A  +FD M +RNV
Sbjct: 69  LQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNV 128

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             W  L+  + ++G  +  + L+  M    V+P+ FT    +KA   L  +E G ++H  
Sbjct: 129 FLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHER 188

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + + +  +  V   ++DMY+KCG +++A  +FD +  +  + WN+MIA Y   G   + 
Sbjct: 189 VLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEA 248

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L R M  +G  P   T  ST+ A     ++  G ++HGF    GF    K  +  SLV
Sbjct: 249 LSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK--LKTSLV 306

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDG 317
           D Y K G +  AR +F+ + ++ ++SW+++I GY    +  EA++LF ++R E  +  D 
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDN 366

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELF 375
                ++       +V++ K+       V S +  +V +   +VD+    G  +EA +L 
Sbjct: 367 ITFVGVLSACNHGGMVKEAKEFFGLMVDVYS-IKPTVQHFTCLVDVLGHAGRFEEAYDLI 425

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             MP++ +   W  ++ G   H   +      +K++  ++EP+      +LS
Sbjct: 426 KGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLI--ELEPEDAGNYVLLS 475


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/567 (35%), Positives = 333/567 (58%), Gaps = 3/567 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  L+K G   D+++ + L+ MY KC     A  +F++M E++V  W  ++  + Q
Sbjct: 125 GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +GN K  L  F  M     +PN  T++T I +   L  +  GM+IH   + SGF  +  +
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++++DMY KCG +  A  +F+ MP K+++ WN+MI+GY L G     + LF++M   G 
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P   T +S +  C     +  G  +HG+ I +     V   +  SL+D Y KCG +  A
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDV--FVNSSLMDLYFKCGKVELA 362

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            ++F LI +  V+SW+ +I GY  E  L EA+ LF ++R+  ++ D    +S++   +  
Sbjct: 363 EKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQL 422

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +E+GK+IH    +     +  V  +++DMY KCG +DEA  +F  +P +++V+WT +I
Sbjct: 423 AALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T YG HG A  A+ LF +ML  +V+PD VA+LA+LSAC H+GLV+E   YF+++ N   +
Sbjct: 483 TAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGI 542

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACRVHGDLELGREVG 509
            PR+EHYSC++D LGRAGRL EA  +++  P ++  + +  TL SACR+H +++LG E+ 
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIA 602

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             L+  D D+   Y+++SN++A A  W+E   +R   +  GLKK  G SW+E++++I  F
Sbjct: 603 RTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPF 662

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           +  D++H   E + + L  +   M++E
Sbjct: 663 FVEDNSHLHLELVFKCLSYLSDHMEDE 689



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 260/492 (52%), Gaps = 6/492 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           + ++L   LR C  +  L  G  +H  +V +G   D+ L   LI+ Y  C   + A  VF
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 71  DKMLERNVVS-WTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSS 128
           D M     +S W  LM G+ +N      L LF ++     +KP+ +T  +  KA G L  
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
              G  IH   +K+G   + VVG+S++ MY KC    +A  +F+ MP K +  WN +I+ 
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISC 181

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y  +G     L  F  M+  G  P+  T T+ + +C  L  +  G +IH  LI SGF   
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF--L 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           + + I+ +LVD Y KCG L  A  +F+ + +K+V++W+S+I GY  + ++   ++LF+++
Sbjct: 240 LDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRM 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++     LSS++ V +  A + +GK +H Y  +     D  V++S++D+Y KCG +
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A ++F  +P   VV+W V+I+GY   G   EA+GLF +M    VE D + + +VL+AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S    +E+ +E    L  +K++         ++D   + G +DEA ++ + +P K  +  
Sbjct: 420 SQLAALEKGKE-IHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVS 477

Query: 489 WQTLLSACRVHG 500
           W ++++A   HG
Sbjct: 478 WTSMITAYGSHG 489



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 204/370 (55%), Gaps = 11/370 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  ++  C++ L L+ G+++H  L+  GF  D  +++ L+DMY KCG +  A  +F++M 
Sbjct: 210 ITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMP 269

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++ VV+W +++ G+   G+  +C+ LF +M +  VKP   TLS+ I      + +  G  
Sbjct: 270 KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKF 329

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +++  + +  V +S++D+Y KCG++  A ++F ++P   +++WN MI+GYV  G 
Sbjct: 330 VHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGK 389

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +M++     D  TFTS L AC  L ++  G +IH  +I      +   V+ 
Sbjct: 390 LFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNN--EVVM 447

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
           G+L+D Y KCG + EA  VF  + ++ ++SW+S+I  Y    +   A+ELF ++ + +++
Sbjct: 448 GALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVK 507

Query: 315 VDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
            D     +++       LV++G     + I+ Y   +P        + ++D+  + G + 
Sbjct: 508 PDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGI-IPR---VEHYSCLIDLLGRAGRLH 563

Query: 370 EATELFNEMP 379
           EA E+  + P
Sbjct: 564 EAYEILQQNP 573


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/599 (34%), Positives = 344/599 (57%), Gaps = 12/599 (2%)

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
           + + +   M    V  +  T S  IK      +V  G ++H     +G+     + N +I
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           +MY K   + EA  +FD MP +++++W  MI+ Y  A  +D+ + L   M   G +P+ F
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           TF+S L+AC  L  +    Q+H +++  G    V   +  +L+D Y K G L+EA +VF 
Sbjct: 388 TFSSVLRACERLYDL---KQLHSWIMKVGLESDV--FVRSALIDVYSKMGELLEALKVFR 442

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +     + W+S+I  +AQ  +  EA+ L++ +R      D   L+S++      +L+E 
Sbjct: 443 EMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLEL 502

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+Q H +  K     D  ++N+++DMY KCG +++A  +FN M  K+V++W+ +I G  +
Sbjct: 503 GRQAHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ 560

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           +G + EA+ LF  M +   +P+ +  L VL ACSH+GLV E   YF  + N   + P  E
Sbjct: 561 NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE 620

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HY C++D LGRA +LD+   LI  M  +P +  W+TLL ACR   +++L     + +L+L
Sbjct: 621 HYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKL 680

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           D  +   YV++SNI+A +  WN+   +R+  + +G++K  G SW+EV+K+IH F  GD +
Sbjct: 681 DPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKS 740

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           HP  ++I++ L +   R+    G+V    + L D++ E +E+SLR HSEKLAI    V G
Sbjct: 741 HPQIDEINRQLNQFICRLAGA-GYVPDTNFVLQDLEGEQREDSLRYHSEKLAI----VFG 795

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            ++    K IR++KNL++CGDCH+F K ++++ +   V+RD  R+H F+ GVCSCGDYW
Sbjct: 796 IMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 192/375 (51%), Gaps = 11/375 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++CC  +  +  G ++H  +   G+     L N LI+MY K   +  A  +FDKM ERNV
Sbjct: 292 IKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNV 351

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT ++  +         + L   M    V PN FT S+ ++A   L  ++   Q+H  
Sbjct: 352 VSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSW 408

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            MK G E +  V +++ID+YSK G + EA ++F  M     + WN++IA +      D+ 
Sbjct: 409 IMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEA 468

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L L++ M+  G   D+ T TS L+AC SL  +  G Q H  ++     +    ++  +L+
Sbjct: 469 LHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK----FDQDLILNNALL 524

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG L +A+ +F+ + +K VISWS++I G AQ     EA+ LF  ++ +  + +  
Sbjct: 525 DMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHI 584

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
            +  ++   +   LV +G   +  +     G+D    +   ++D+  +   +D+  +L +
Sbjct: 585 TILGVLFACSHAGLVNEG-WYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIH 643

Query: 377 EMPVK-NVVTWTVII 390
           EM  + +VVTW  ++
Sbjct: 644 EMNCEPDVVTWRTLL 658



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 5/226 (2%)

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
           L+    V   +  +L +    +L  AM +   +  R +  D    S ++        V +
Sbjct: 244 LVSPHYVPPETESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVRE 303

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GK++H +         T ++N +++MY+K  L++EA  LF++MP +NVV+WT +I+ Y  
Sbjct: 304 GKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSN 363

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
             L   A+ L   M  D V P+   + +VL AC     +++   +  ++  +  +  R  
Sbjct: 364 AQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVR-- 421

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             S ++D   + G L EA  +   M    S+ +W ++++A   H D
Sbjct: 422 --SALIDVYSKMGELLEALKVFREMMTGDSV-VWNSIIAAFAQHSD 464



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 4/116 (3%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M RV F   +++  L   LR C+   LL+ G Q H  ++K  F  DL+LNN L+DMY KC
Sbjct: 475 MRRVGFP--ADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKC 530

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           G +  A  +F++M +++V+SW+ ++ G  QNG +   L+LF  M     KPN  T+
Sbjct: 531 GSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITI 586


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/577 (36%), Positives = 327/577 (56%), Gaps = 43/577 (7%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +P  G S+ID          A+R+F  +   +L  +NAMI G+  +   D+    + + Q
Sbjct: 61  DPSSGTSLIDY---------ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQ 111

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP-------------------- 246
             G +PD  TF   +K+C  L  +  G+Q HG +I  GF                     
Sbjct: 112 RQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTE 171

Query: 247 ---------YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
                    Y V  V   S++  + KCG +  AR++FD + +K++++WS++I GYAQ  +
Sbjct: 172 AATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNH 231

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
             +A+ELF+ L+ + ++ +  V+ S++   A    +E G++ H Y  K    L+  +  +
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +VDMY +CG ID+A  +F ++P ++ ++WT +I G   HG ++ ++  F  M+   + P 
Sbjct: 292 LVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPR 351

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + + AVLSACSH GLVE   + F  +  D R++PR+EHY C+VD LGRAG+L+EA+  +
Sbjct: 352 DITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFV 411

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             MPVKP+  +W  LL ACR+H + E+G  VG+IL++L   +   YV++SNI+A+A  W 
Sbjct: 412 LKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWE 471

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           +   +R++ ++KGLKK  G S +E+D  +H F  GD +HP  +KI ++  E+  R++   
Sbjct: 472 KVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAA- 530

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+      AL DI EE KE +L  HSEKLAI   ++R     + G  IR+ KNLRVC DC
Sbjct: 531 GYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRS----EAGTPIRIVKNLRVCEDC 586

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H   K +SK+     +VRD  RFH F  G+CSC DYW
Sbjct: 587 HTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 40/323 (12%)

Query: 6   FSLVSERQ-RLADSL------RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
           F + S+RQ  L D+L      + C+K   +  G Q HG ++K GF  D+ + N L+ MYA
Sbjct: 106 FYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYA 165

Query: 59  -------------------------------KCGEMNGACAVFDKMLERNVVSWTALMCG 87
                                          KCG++  A  +FD+M E+N+V+W+ ++ G
Sbjct: 166 TFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISG 225

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + QN +    + LF  + S  V+ NE  + + I +   L ++E G + H   +K+G   N
Sbjct: 226 YAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLN 285

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            ++G +++DMY++CG I++A  +F+ +P +  ++W A+IAG  + GYS++ L  F  M E
Sbjct: 286 LILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVE 345

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P + TFT+ L AC   G V  G QI   +         +    G +VD   + G L
Sbjct: 346 AGLTPRDITFTAVLSACSHGGLVERGFQIFESM-KRDHRVEPRLEHYGCMVDLLGRAGKL 404

Query: 268 VEARR-VFDLIEQKSVISWSSLI 289
            EA R V  +  + +   W +L+
Sbjct: 405 EEAERFVLKMPVKPNAPVWGALL 427



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 197/449 (43%), Gaps = 50/449 (11%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLI----DMYAKCGEMNGACAVFDKM 73
           SL  CS    L +   +H  +++     D+   + LI    D  +    ++ A  +F ++
Sbjct: 23  SLETCSD---LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
              N+  + A++ G   + N       + Q     + P+  T    +K+   L  +  G 
Sbjct: 80  QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY---- 189
           Q HG  +K GFE +  V NS++ MY+  G    A  +F  M    +++W +MI G+    
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCG 199

Query: 190 ----------------------VLAGYS-----DKGLLLFRKMQEHGEIPDEFTFTSTLK 222
                                 +++GY+     DK + LF+ +Q  G   +E    S + 
Sbjct: 200 DVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVIS 259

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           +C  LG++  G + H +++ +G   ++  ++  +LVD Y +CG + +A  VF+ + ++  
Sbjct: 260 SCAHLGALELGERAHDYVVKNGM--TLNLILGTALVDMYARCGSIDKAVWVFEDLPERDT 317

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           +SW++LI G A       +++ F  + E  L       ++++   +   LVE+G QI   
Sbjct: 318 LSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFE- 376

Query: 343 AAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLA 399
           + K    ++  + +   +VD+  + G ++EA     +MPVK N   W  ++     H  A
Sbjct: 377 SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA 436

Query: 400 K--EAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +  E VG     LL    P    Y  +LS
Sbjct: 437 EIGERVGKILIQLL----PQHSGYYVLLS 461


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/687 (34%), Positives = 377/687 (54%), Gaps = 17/687 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L+ C ++  L  G ++H  +V  G   DL L N LI MY KCG M  A AVF+K+ 
Sbjct: 3   FASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIE 62

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             N+ SW+ ++   + NG A+  L L+  M    V+ +   L   + A   L S+++G  
Sbjct: 63  SPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRA 122

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAG 193
           +       GF  +PVV NS+++MY K G I+ A + F D+   +S+++W AMI+G+ L G
Sbjct: 123 LEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHG 182

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTS--TLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
             D  L  FRKM   G  P+E TF S   L+AC +L  +  G ++H  ++ +G   S+  
Sbjct: 183 CEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI-- 240

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLI-EQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            +  SL++ Y KCG L EARRVF+   + +++I+WS++I  Y+   +  +A+ L++++  
Sbjct: 241 -VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDL 299

Query: 311 RSLQVDGFVLSSMMGV--FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
             L+ D +  +S++     A   L E G+ +H             ++ ++++MY + G +
Sbjct: 300 EGLEPDEYTFTSLLDACSIAGDTLTE-GRALHRRLEAKGLEKKMVLATALINMYGRYGQL 358

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           ++A  +F +M   N+V WT +I  + +HG    A+ L  +M L+ V+ D + +L+VL AC
Sbjct: 359 EDALRVFEKMNHWNLVAWTALIAAFAQHGNV-HAIDLSWRMHLEGVQADNIVFLSVLHAC 417

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SH+ ++E     F  +  D  ++    HYSC+VD L R GR+ EA+ L+ SMP +P+   
Sbjct: 418 SHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHME 477

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
            +TLL+ACRV GD   G  V  +   L   +   YV+MS+ +A    W+E   +++    
Sbjct: 478 MKTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAK 537

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDT-HPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            G+KK  G S VEV   +H F+ G+ + H    +I   L  ++  +KE  G++       
Sbjct: 538 LGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEG-GYIPDTGQIG 596

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           H ++E+ KE+ L +HSE++AI   L+R       G  I V KNLRVC DCH   K +S+ 
Sbjct: 597 HRLEEDGKEDLLALHSERVAIAFGLLR----VPAGLPIHVVKNLRVCSDCHAVAKIISRS 652

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +    VVRDA RFHRFE G CSCGDYW
Sbjct: 653 VGRRIVVRDAYRFHRFENGTCSCGDYW 679


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/678 (32%), Positives = 372/678 (54%), Gaps = 11/678 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           ++CC++   L+ G   H A +++G    ++   N L+  YAK G +  A  VFD M  R+
Sbjct: 114 VKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRD 173

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +V+W +++ G++ NG     L  F +M     V+ +   +   + A  + S++  G ++H
Sbjct: 174 IVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVH 233

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              ++ G E +  VG S++DMY KCG I  A  MF  MP+++++TWN MI GY L G  +
Sbjct: 234 AYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPE 293

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           +    F +M+  G   +  T  + L AC    S   G  +HG++  S F   V  V+  +
Sbjct: 294 EAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHV--VLETA 351

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L++ Y K G +  +  +F  +  K+++SW+++I  Y  +E   EA+ LF +L  + L  D
Sbjct: 352 LLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPD 411

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F +S+++  F    L+ Q +Q+H+Y  ++  G +T V+N+++ MY +CG +  + ++F+
Sbjct: 412 YFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFD 471

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
           +M  K+V++W  II GY  HG  K A+ +F +M  + ++P+   +++VL+ACS SG+ +E
Sbjct: 472 KMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADE 531

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
               F+ +  D  + P+IEHY C+ D LGRAG L E    IES+P+ P+  IW +LL+A 
Sbjct: 532 GWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTAS 591

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
           R   D+++     E +  L+ DN   YV++S+++ADAG W + +R+R     KGL++   
Sbjct: 592 RNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDA 651

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
           RS VE+      F  GD THP ++ IH+V   + +++ E         Y  +     S  
Sbjct: 652 RSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGE-------TDYPRNLSDPISLT 704

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
               +   K ++ LA+V G ++ +    I V KN+R+C  CH  +K +SK  +   VV D
Sbjct: 705 SRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGD 764

Query: 677 ATRFHRFEGGVCSCGDYW 694
              +H F  G C CGDYW
Sbjct: 765 TNIYHEFLDGSCCCGDYW 782



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 220/468 (47%), Gaps = 28/468 (5%)

Query: 53  LIDMYAKCGEMNGACAVF----DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L+  +A  G M+ A A      D  L   V+       GF   G  +A L+ +  M ++ 
Sbjct: 49  LVLSHAAAGRMHDALAAVRSSPDAFLHNVVIR------GFADAGLPEAALAAYRAMLAAG 102

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEA 167
            +P+ FT    +K    L ++E G   H   ++ G   + V  GNS++  Y+K G + +A
Sbjct: 103 ARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADA 162

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGS 226
            R+FD MP + ++TWN+M+ GYV  G     L  FR+M E  ++  D     + L AC  
Sbjct: 163 ERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCL 222

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
             ++  G ++H ++I  G    VK  +  SL+D Y KCG +  A  +F  +  ++V++W+
Sbjct: 223 DSALMQGREVHAYVIRHGLEQDVK--VGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWN 280

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
            +I GYA      EA + F Q++    QV+     +++   A       G+ +H Y  + 
Sbjct: 281 CMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRS 340

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
                  +  ++++MY K G +  +  +F +M  K +V+W  +I  Y    +  EA+ LF
Sbjct: 341 QFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLF 400

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH------YSCI 460
            ++L   + PD     AV+ A    GL+ + ++  S +        R+++       + +
Sbjct: 401 LELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIV-------RLDYGENTLVTNAV 453

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           +    R G +  ++ + + M  K  I+ W T++    +HG  ++  E+
Sbjct: 454 MHMYARCGDVVSSRKIFDKMAGKDVIS-WNTIIMGYAIHGQGKIALEM 500



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 176/348 (50%), Gaps = 14/348 (4%)

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S++  ++  GR+++A  +  V  +      N +I G+  AG  +  L  +R M   G  P
Sbjct: 48  SLVLSHAAAGRMHDA--LAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FTF   +K C  LG++  G   H   I  G   S +     SL+ FY K G + +A R
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGS-EVYTGNSLLAFYAKLGMVADAER 164

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE-RSLQVDGF-VLSSMMGVFADF 330
           VFD +  + +++W+S++ GY      A A++ FR++ E   +Q DG  +++++     D 
Sbjct: 165 VFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDS 224

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           AL+ QG+++HAY  +     D  V  S++DMY KCG I  A  +F  MP + VVTW  +I
Sbjct: 225 ALM-QGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMI 283

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH--SGLVEES-QEYFSRLCND 447
            GY  +G  +EA   F +M  +  + + V  + +L+AC+   S L   S   Y +R    
Sbjct: 284 GGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTR---- 339

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
            +  P +   + +++   + G++  ++ +   M  K ++  W  +++A
Sbjct: 340 SQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNK-TLVSWNNMIAA 386


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/667 (34%), Positives = 351/667 (52%), Gaps = 9/667 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G   H  L +M  S +  ++N ++ MY  C     A   FDK+++R++ SW  ++  
Sbjct: 96  LSDGKLFHNRLQRMANS-NKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISA 154

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           + + G     + LF +M    + PN    ST I +    S ++ G QIH   ++  F  +
Sbjct: 155 YTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAAD 214

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +   I +MY KCG ++ A    + M  KS +    ++ GY  A  +   LLLF KM  
Sbjct: 215 ISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMIS 274

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G   D F F+  LKAC +LG +  G QIH + I  G    V   +   LVDFYVKC   
Sbjct: 275 EGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVS--VGTPLVDFYVKCARF 332

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR+ F+ I + +  SWS+LI GY Q      A+E+F+ +R + + ++ F+ +++    
Sbjct: 333 EAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQAC 392

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           +  + +  G QIHA A K       S  ++++ MY KCG +D A + F  +   + V WT
Sbjct: 393 SAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWT 452

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II  +  HG A EA+ LF++M    V P+ V ++ +L+ACSHSGLV+E +++   + + 
Sbjct: 453 AIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDK 512

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             + P I+HY+C++D   RAG L EA  +I SMP +P +  W++LL  C    +LE+G  
Sbjct: 513 YGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMI 572

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + + RLD  +   YV+M N++A AG W+E  + RK+   + L+K    SW+ V  ++H
Sbjct: 573 AADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVH 632

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F  GD  HP TE+I+  L E+    K+    +   + AL D  E  +++ L  HSE+LA
Sbjct: 633 RFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTE--RKDQLLDHSERLA 690

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
           I   L+    +      I VFKN R C DCHEF K +S +     VVRD  RFH    G 
Sbjct: 691 IAYGLICTAADTP----IMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGE 746

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 747 CSCRDYW 753



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 6/287 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L  G Q+H   +K+G   ++ +   L+D Y KC     A   F+ + E N 
Sbjct: 288 LKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND 347

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW+AL+ G+ Q+G     L +F  + S  V  N F  +   +A   +S +  G QIH  
Sbjct: 348 FSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHAD 407

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G        +++I MYSKCG+++ A + F  +     + W A+I  +   G + + 
Sbjct: 408 AIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEA 467

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AGS 256
           L LF++MQ  G  P+  TF   L AC   G V  G Q   FL +    Y V   I     
Sbjct: 468 LRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQ---FLDSMTDKYGVNPTIDHYNC 524

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAM 302
           ++D Y + G L+EA  V   +  +  V+SW SL+ G     NL   M
Sbjct: 525 MIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGM 571


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/604 (36%), Positives = 335/604 (55%), Gaps = 45/604 (7%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           ++ G Q H   +  G + N  +   ++ MY+  G ++ A  +FD +   S + +N++I  
Sbjct: 93  IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152

Query: 189 YVLAGYSDKG---LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           Y   G        L  + +M   G + D FT    LK+C  L  V  G  +HG  +  G 
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGL 212

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
                  +  SL+D YVKCG + +AR++FD +  + + SW++LI GY +E  +  A +LF
Sbjct: 213 EGDF--YVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLF 270

Query: 306 RQLRERSL----------QVDGF-----------------------VLSSMMGVFADFAL 332
            ++  R++            +GF                        + S++   A  A 
Sbjct: 271 ERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAA 330

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVII 390
           +E+G++IH +A  +   L++SV  ++  MY KC  + EA   F+ +    KN++ W  +I
Sbjct: 331 LERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMI 390

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T Y  HG   EAV +F  ML   V+PD V ++ +LS CSHSGL++    +F+ +     +
Sbjct: 391 TAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSV 450

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +PR+EHY+C+VD LGRAGRL EAK LI  MP++   ++W  LL+ACR H +LE+      
Sbjct: 451 EPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAAR 510

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  L+ DN  NYV++SN++A+AG W E ++LR L + +G+KK  G SW+E++ + H F 
Sbjct: 511 RLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFM 570

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
           G D +HP  ++I++ L  + +++K   G++    + LHDI EE KE +L  HSEKLAI  
Sbjct: 571 GADKSHPQAKEIYKFLEALPEKIKMA-GYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAF 629

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
            L    LN +PG V+RV KNLR+CGDCH   K +SKI +   +VRD  RFH F+ G CSC
Sbjct: 630 GL----LNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSC 685

Query: 691 GDYW 694
           GDYW
Sbjct: 686 GDYW 689



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 214/464 (46%), Gaps = 57/464 (12%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +++  +  G Q H  +V  G   +  L   ++ MYA  G+++ A  VFD++   + + + 
Sbjct: 88  TRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYN 147

Query: 83  ALMCGFLQNGNAKAC---LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           +++  + ++G        L  + +M    +  + FTL   +K+   LS V  G  +HG  
Sbjct: 148 SIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQG 207

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY---------- 189
           ++ G E +  VG S+IDMY KCG I +A ++FD M  + + +WNA+IAGY          
Sbjct: 208 LRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAE 267

Query: 190 ----------------VLAGYSDKG-----LLLFRKMQEHGE--IPDEFTFTSTLKACGS 226
                           +++GY+  G     L LF +M + G    P+  T  S L AC  
Sbjct: 268 DLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVIS 284
             ++  G +IH F   +G    + + +  +L   Y KC  LVEAR  FD+I Q  K++I+
Sbjct: 328 SAALERGRRIHDF--ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIA 385

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-------K 337
           W+++I  YA      EA+ +F  +    +Q D      ++   +   L++ G        
Sbjct: 386 WNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMG 445

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
            IH+   +V           +VD+  + G + EA EL ++MP++     W  ++     H
Sbjct: 446 TIHSVEPRVEH------YACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH 499

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC-SHSGLVEESQE 439
              + A    R++ +  +EPD      +LS   + +G+ EE ++
Sbjct: 500 RNLEIAELAARRLFV--LEPDNSGNYVLLSNLYAEAGMWEEVKK 541



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 164/376 (43%), Gaps = 51/376 (13%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           +F+L    +  AD  R C        G  +HG  +++G   D  +   LIDMY KCG + 
Sbjct: 181 NFTLPFVLKSCADLSRVC-------MGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIG 233

Query: 65  GACAVFDKML-------------------------------ERNVVSWTALMCGFLQNGN 93
            A  +FDKM+                                RN+VSWTA++ G+ QNG 
Sbjct: 234 DARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGF 293

Query: 94  AKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           A+  L LF +M    S +KPN  T+ + + A    +++E G +IH      G   N  V 
Sbjct: 294 AEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQ 353

Query: 152 NSIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            ++  MY+KC  + EA   FD++    K+LI WN MI  Y   G   + + +F  M   G
Sbjct: 354 TALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAG 413

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCL 267
             PD  TF   L  C   G +  G          G  +SV+  +     +VD   + G L
Sbjct: 414 VQPDAVTFMGLLSGCSHSGLIDAGLN---HFNDMGTIHSVEPRVEHYACVVDLLGRAGRL 470

Query: 268 VEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQVDG-FVLSSMMG 325
           VEA+ +   +  ++  S W +L+       NL  A    R+L        G +VL S   
Sbjct: 471 VEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLS--N 528

Query: 326 VFADFALVEQGKQIHA 341
           ++A+  + E+ K++ A
Sbjct: 529 LYAEAGMWEEVKKLRA 544


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/649 (34%), Positives = 347/649 (53%), Gaps = 47/649 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL+  N ++    KCG++  AC +FDKM ERNVVSWT ++ G L+ G  +    LF  M 
Sbjct: 111 DLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMP 170

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           +  V                                    WN     S++  +   GR+ 
Sbjct: 171 TKDVTA----------------------------------WN-----SMVHGFFSNGRVE 191

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A  +F+ MP +++I+W ++I G    G S + L++F KM    +     T    L AC 
Sbjct: 192 DAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLASFKATSS-TLACALTACA 250

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           ++ +   G QIHG ++ +G  Y     I+ SL+ FY  C  +  A  +F+    ++V+ W
Sbjct: 251 NICTPFIGVQIHGLIVKTG--YCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVW 308

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++L+ GY       +A+++F+ +   S+  +   L+S +        V++G+++HA A K
Sbjct: 309 TALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHK 368

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +    D  VSNS+V MY KCG I++   +F  M  KNVV+W  II G  +HG  + A+ L
Sbjct: 369 LGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTL 428

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F +M+   V+PD +    +LSAC HSG++ + + +F     +  ++   EHYS +VD LG
Sbjct: 429 FAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLG 488

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           R G+L+EA+ LI  MP K +  +W  LLS+   H ++ +     + +L L  +    Y +
Sbjct: 489 RYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTL 548

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A  G W E  ++RK  + +G+ K  G SW+ +    H F  GD +HPL+ KI+Q 
Sbjct: 549 LSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQK 608

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L  +  ++K ELG+V   K++ HD++ E KEE L  HSE+LAIG  L+    +   G  I
Sbjct: 609 LEWLGGKLK-ELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLI----STVEGSTI 663

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            V KNLR+CGDCH  +K  SK++    VVRD +RFH F  G CSCGDYW
Sbjct: 664 IVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 2/296 (0%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S  +    LA +L  C+       GVQ+HG +VK G+ F+  ++  LI  YA C  ++ A
Sbjct: 234 SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNA 293

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            ++F+  + RNVV WTAL+ G+  N      L +F  M   SV PN+ +L++ + +   L
Sbjct: 294 SSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGL 353

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            +V+ G ++H +  K G E +  V NS++ MY+KCG IN+   +F  M  K++++WN++I
Sbjct: 354 EAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSII 413

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            G    G+    L LF +M      PDE T    L ACG  G +  G           F 
Sbjct: 414 VGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHF-GKNFG 472

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEENLAEA 301
             +      S+VD   + G L EA  +  ++  K+  + W +L+       N+  A
Sbjct: 473 IEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVA 528



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 168/376 (44%), Gaps = 36/376 (9%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N ++  + + GRI+EA  +F+ M +  +  +  MI GY   G  +  L LF +M     +
Sbjct: 54  NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEM----PV 109

Query: 212 PDEFTFTSTLKACGSLGS----------------VGGGTQIHGFL----------ITSGF 245
            D  ++ S LK C   G                 V   T I+G L          +    
Sbjct: 110 KDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVM 169

Query: 246 PYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           P   K V A  S+V  +   G + +A  +F+ +  ++VISW+S+I G        EA+ +
Sbjct: 170 P--TKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVV 227

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++   S +     L+  +   A+      G QIH    K     +  +S S++  Y  
Sbjct: 228 FHKMLA-SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYAN 286

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           C LID A+ +FN+   +NVV WT ++TGYG +    +A+ +F+ M+   V P+  +  + 
Sbjct: 287 CKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSA 346

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L++C     V+  +E  + + +   ++  I   + +V    + G +++   +   M  K 
Sbjct: 347 LNSCCGLEAVDRGREVHA-VAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRK- 404

Query: 485 SIAIWQTLLSACRVHG 500
           ++  W +++  C  HG
Sbjct: 405 NVVSWNSIIVGCAQHG 420



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 17/185 (9%)

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           +  K  S L T  SN ++  +L+ G IDEA  LFN+M    V  +T++I GY   G  ++
Sbjct: 40  FGTKKLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLED 99

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF +M + D+    +++ ++L  C   G +  +   F     DK  +  +  ++ I+
Sbjct: 100 ALKLFYEMPVKDL----ISWNSMLKGCLKCGDLTMACNMF-----DKMSERNVVSWTTII 150

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR--EVGEILLRLDGDN 519
           + L   GR++ A+ L   MP K  +  W ++     VHG    GR  +  E+  ++   N
Sbjct: 151 NGLLEFGRVEVAECLFRVMPTK-DVTAWNSM-----VHGFFSNGRVEDAIELFEKMPNRN 204

Query: 520 PVNYV 524
            +++ 
Sbjct: 205 VISWT 209


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/619 (34%), Positives = 353/619 (57%), Gaps = 21/619 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           L+    + GN K  + L C   + + K  E  +++ I+ +    S+ +G+ +H   + SG
Sbjct: 49  LIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQN----SLSDGVDVHHRLVGSG 104

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            + +P +   +I+MY   G ++ A ++FD    K++  WNA+     +A   +  L+L+ 
Sbjct: 105 LDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYG 164

Query: 204 KMQEHGEIPDEFTFTSTLKACG----SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +M   G   + FT+T  LKAC     S+  +  G +IH  ++  G+   V   +  +L+D
Sbjct: 165 QMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVH--VMTTLLD 222

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DG 317
            Y + G +  A  VF  +  K+++SWS++I  YA+ E   +A+ELF+ +   +     + 
Sbjct: 223 VYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNP 282

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELF 375
             + S++   A  A +E GK +HAY  +   GLD++  V N+++ MY +CG I     +F
Sbjct: 283 ITMVSVLQACASLAALEHGKLVHAYVLR--RGLDSTLPVLNTLITMYGRCGEISTGQRVF 340

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + M  ++V++W  +I+ YG HGL K+A+ +F  M+   V P  + ++ VL ACSH+GLVE
Sbjct: 341 DYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVE 400

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E++  F  + N  R+ PR+EHY+C+VD LGRA RLDEA  LI++M  KP   +W +LL +
Sbjct: 401 EAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGS 460

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+H ++EL      +L  L+  N  NYV++S+I+A +  WN+  R+RK   S+GL+K+ 
Sbjct: 461 CRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIP 520

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
             SW+EV ++I+     ++ +P  E++   L+ +   +K + G+V       +D+ EE K
Sbjct: 521 SCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQ-GYVPQTNVVTYDLDEEEK 579

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  +  HS KLA+   L+    N   G++IR+  NLR+C DCH F+K +SK      ++R
Sbjct: 580 ERIVLGHSGKLAVAFGLI----NTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLR 635

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F+ GVCSCGDYW
Sbjct: 636 DVNRFHCFKDGVCSCGDYW 654



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 10/368 (2%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C  +N L D GV +H  LV  G   D  L   LI+MY   G ++ AC VFD+  E+ +  
Sbjct: 84  CIEQNSLSD-GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFV 142

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV----LSSVENGMQIH 136
           W A+          +  L L+ QM    +  N FT +  +KA  V    +  +  G +IH
Sbjct: 143 WNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIH 202

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              ++ G+E +  V  +++D+Y++ G ++ A+ +F  MP K++++W+AMIA Y       
Sbjct: 203 AHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPM 262

Query: 197 KGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           K L LF+ M  +    +P+  T  S L+AC SL ++  G  +H +++  G   ++   + 
Sbjct: 263 KALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLP--VL 320

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+  Y +CG +   +RVFD ++++ VISW+SLI  Y       +A+++F  +  R + 
Sbjct: 321 NTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVS 380

Query: 315 VDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
                  +++   +   LVE+ K +  +   K            +VD+  +   +DEA E
Sbjct: 381 PSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIE 440

Query: 374 LFNEMPVK 381
           L   M  K
Sbjct: 441 LIQNMDFK 448



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L++G  +H  +++ G    L + N LI MY +CGE++    VFD M +R+V
Sbjct: 289 LQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDV 348

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SW +L+  +  +G  K  + +F  M +  V P+  T  T + A      VE   +I   
Sbjct: 349 ISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEA-KILFE 407

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMI 186
            M + +  +P + +   ++D+  +  R++EA  +   M  K   T W +++
Sbjct: 408 SMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLL 458


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/607 (34%), Positives = 346/607 (57%), Gaps = 4/607 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A   R C+    L  G +LH   +K  F  D+++    +DMYAKCG M  A  V   M +
Sbjct: 286 ASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK 345

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            ++ S+ A++ G+ ++      L  F  +  + +  +E TLS  + A   +     G Q+
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +KS    N  V N+I+DMY KC  + EA+ +FD+M  +  ++WNA+IA     G  
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           ++ L  F  M      PD+FT+ S LKAC    ++  G +IH  +I SG  +   + +  
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFD--SFVGA 523

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LVD Y KCG + +A ++ D  EQK+++SW+++I G++  +   +A + F ++ E  +  
Sbjct: 524 ALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F  ++++   A+ A V  GKQIHA   K     D  + +++VDMY KCG + ++  +F
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMF 643

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + P ++ VTW  ++ GY  HGL +EA+ LF  M L +V+P+   +++VL AC+H GLV+
Sbjct: 644 EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVD 703

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF  + ++  + P+ EHYSC+VD LGR+GR+DEA NL++ MP +    IW+ LLS 
Sbjct: 704 KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSV 763

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++HG++E+  +    LL+LD  +    V++SNI+ADAG W     +RK+ R   LKK  
Sbjct: 764 CKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEP 823

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEES 614
           G SW+E+  E+H F  GD  HP  E+I++ L  +   M + +G++      L  +++E +
Sbjct: 824 GCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEM-QSVGYIPDCDVLLDEEVEEPA 882

Query: 615 KEESLRV 621
           + E LR 
Sbjct: 883 QLEELRT 889



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 263/498 (52%), Gaps = 9/498 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  LA  L+ C      D GVQ+HG +VK GF  D++  + L+ MYAKC  ++ + +VF
Sbjct: 180 DRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVF 239

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
            ++ E+N VSW+A++ G +QN      L LF +M    V  ++   ++  ++   LS++ 
Sbjct: 240 SELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALR 299

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G ++H   +KS F  + +VG + +DMY+KCGR+ +A ++   MP  SL ++NA+I GY 
Sbjct: 300 LGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYA 359

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
            +    + L  F+ + + G   DE T +  L AC S+     G Q+HG  + S    S+ 
Sbjct: 360 RSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKS---ISMS 416

Query: 251 TV-IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
            + +A +++D Y KC  L EA  +FD++E++  +SW+++I    Q  N  E +  F  + 
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI 476

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              ++ D F   S++   A    +  G +IH    K   G D+ V  ++VDMY KCG+I+
Sbjct: 477 HSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIE 536

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A ++ +    K +V+W  II+G+     +++A   F +ML   V PD   Y AVL  C+
Sbjct: 537 KADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCA 596

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           +   V   ++  +++   + ++  +   S +VD   + G + +++ + E  P +  +  W
Sbjct: 597 NLATVGLGKQIHAQIIK-QELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVT-W 654

Query: 490 QTLLSACRVHGDLELGRE 507
             +L     HG   LG E
Sbjct: 655 NAMLCGYAHHG---LGEE 669



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 276/534 (51%), Gaps = 36/534 (6%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML------- 74
           CSK   L+ G Q H  ++  GF     ++N L+ MY KC  ++ AC VFDKM        
Sbjct: 59  CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSY 118

Query: 75  ------------------------ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
                                   ER+VVSW +++ GFLQNG  +  + +F +MG   V 
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  +L+  +KA G L   + G+Q+HG+ +K GF+ + V G++++ MY+KC R++++  +
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  +P K+ ++W+AMIAG V    + +GL LF++MQ  G    +  + S  ++C +L ++
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSAL 298

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G ++H   + S F   +  ++  + +D Y KCG + +A++V   + + S+ S++++I+
Sbjct: 299 RLGKELHSHALKSAFGSDI--IVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIV 356

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           GYA+ +   +A++ F+ L +  L  D   LS  +   A      +G+Q+H  A K  S  
Sbjct: 357 GYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMS 416

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           +  V+N+I+DMY KC  + EA++LF+ M  ++ V+W  II    ++G  +E +  F  M+
Sbjct: 417 NICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMI 476

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
              +EPD   Y +VL AC+    +    E  +R+     M       + +VD   + G +
Sbjct: 477 HSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSG-MGFDSFVGAALVDMYCKCGMI 535

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           ++A  + +    K  ++ W  ++S   +    E   +    +L + G NP N+ 
Sbjct: 536 EKADKIHDRTEQKTMVS-WNAIISGFSLLQQSEDAHKFFSRMLEM-GVNPDNFT 587



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 35/308 (11%)

Query: 206 QEHGEIPDEF-TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           Q   + P +  TF+   + C    S+  G Q H  +I  GF  +  T ++  L+  Y+KC
Sbjct: 40  QNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPT--TFVSNCLMQMYIKC 97

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL----------- 313
             L  A +VFD +  + V+S++S+I GYA    +  A + F ++ ER +           
Sbjct: 98  LYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFL 157

Query: 314 -------QVDGFVLSSMMGVFADFALV-------------EQGKQIHAYAAKVPSGLDTS 353
                   +D F+     GV  D A +             + G Q+H    K     D  
Sbjct: 158 QNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVV 217

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
             ++++ MY KC  +D++  +F+E+P KN V+W+ +I G  ++    E + LF++M    
Sbjct: 218 TGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVG 277

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           V      Y ++  +C+    +   +E  S           I   +  +D   + GR+ +A
Sbjct: 278 VGVSQSIYASLFRSCAALSALRLGKELHSHALKSA-FGSDIIVGTATLDMYAKCGRMADA 336

Query: 474 KNLIESMP 481
           + ++ SMP
Sbjct: 337 QKVLSSMP 344


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/607 (34%), Positives = 349/607 (57%), Gaps = 4/607 (0%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A   R C+       G QLHG  +K  F++D ++    +DMYAKC  M+ A  VF+ +  
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN 302

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
               S+ A++ G+ +       L +F  +  + +  +E +LS  + A  V+     G+Q+
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQL 362

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+ +K G  +N  V N+I+DMY KCG + EA  +FD M  +  ++WNA+IA +      
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L LF  M      PD+FT+ S +KAC    ++  G +IHG ++ SG    +   +  
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGM--GLDWFVGS 480

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +LVD Y KCG L+EA ++ D +E+K+ +SW+S+I G++ ++    A   F Q+ E  +  
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
           D F  ++++ V A+ A +E GKQIHA   K+    D  +++++VDMY KCG + ++  +F
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            + P ++ VTW+ +I  Y  HG  ++A+ LF +M L +V+P+   +++VL AC+H G V+
Sbjct: 601 EKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +   YF  + +   + P +EHYSC+VD LGR+ +++EA  LIESM  +    IW+TLLS 
Sbjct: 661 KGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSN 720

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           C++ G++E+  +    LL+LD  +   YV+++N++A+ G W E  ++R + ++  LKK  
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEP 780

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEES 614
           G SW+EV  E+H F  GD  HP +E+I++    +   MK   G+V  +   L  +++E+ 
Sbjct: 781 GCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWA-GYVPDIDSMLDEEVEEQD 839

Query: 615 KEESLRV 621
             E L+ 
Sbjct: 840 PYEGLKT 846



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 263/484 (54%), Gaps = 8/484 (1%)

Query: 19  LRCCSKNLLLDYGV--QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           L+ CS   + DYG+  Q+H   ++MGF  D++  + L+DMY+KC +++GA  +F +M ER
Sbjct: 145 LKACSG--IEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPER 202

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N+V W+A++ G++QN      L LF  M    +  ++ T ++  ++   LS+ + G Q+H
Sbjct: 203 NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLH 262

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G  +KS F ++ ++G + +DMY+KC R+++A ++F+ +P     ++NA+I GY       
Sbjct: 263 GHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGL 322

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           K L +F+ +Q      DE + +  L AC  +     G Q+HG  +  G  +++   +A +
Sbjct: 323 KALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNI--CVANT 380

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++D Y KCG LVEA  +FD +E++  +SW+++I  + Q E + + + LF  +   +++ D
Sbjct: 381 ILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            F   S++   A    +  G +IH    K   GLD  V +++VDMY KCG++ EA ++ +
Sbjct: 441 DFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHD 500

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K  V+W  II+G+     ++ A   F +ML   V PD   Y  VL  C++   +E 
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560

Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
            ++  +++     +   +   S +VD   + G + +++ + E  P K     W  ++ A 
Sbjct: 561 GKQIHAQILK-LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMICAY 618

Query: 497 RVHG 500
             HG
Sbjct: 619 AYHG 622



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 256/472 (54%), Gaps = 13/472 (2%)

Query: 32  VQLHGALVKMGFSF---------DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           VQ +     M ++F         D++  N +I  YA+ G M  A ++FD M ER+VVSW 
Sbjct: 48  VQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWN 107

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           +L+  +L NG  +  + +F +M S  +  +  T S  +KA   +     G+Q+H + ++ 
Sbjct: 108 SLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQM 167

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           GFE + V G++++DMYSKC +++ A R+F  MP ++L+ W+A+IAGYV      +GL LF
Sbjct: 168 GFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           + M + G    + T+ S  ++C  L +   GTQ+HG  + S F Y   ++I  + +D Y 
Sbjct: 228 KDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD--SIIGTATLDMYA 285

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           KC  + +A +VF+ +      S++++I+GYA+++   +A+E+F+ L+   L  D   LS 
Sbjct: 286 KCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSG 345

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
            +   +      +G Q+H  A K   G +  V+N+I+DMY KCG + EA  +F++M  ++
Sbjct: 346 ALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRD 405

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V+W  II  + ++    + + LF  ML   +EPD   Y +V+ AC+    +    E   
Sbjct: 406 AVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHG 465

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           R+     M       S +VD  G+ G L EA+ + + +  K +++ W +++S
Sbjct: 466 RIVKSG-MGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIIS 515



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           +FT S  ++    L ++  G Q H   + + F     V N ++  Y K   +N A ++FD
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG----------------------- 209
            MP + +I+WN MI GY   G       LF  M E                         
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 210 -------EIPDEF-TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
                  +IP ++ TF+  LKAC  +   G G Q+H   I  GF   V  V   +LVD Y
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDV--VTGSALVDMY 183

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            KC  L  A R+F  + +++++ WS++I GY Q +   E ++LF+ + +  + V     +
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           S+    A  +  + G Q+H +A K     D+ +  + +DMY KC  + +A ++FN +P  
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-HSGLVEESQEY 440
              ++  II GY +     +A+ +F+ +    +  D ++    L+ACS   G +E  Q  
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-- 361

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
              L     +   I   + I+D  G+ G L EA  + + M  + +++ W  +++A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVS-WNAIIAA 415



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 103/189 (54%), Gaps = 4/189 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           ++ +    A  L  C+    ++ G Q+H  ++K+    D+ + + L+DMY+KCG M  + 
Sbjct: 538 VIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+K  +R+ V+W+A++C +  +G+ +  + LF +M   +VKPN     + ++A   + 
Sbjct: 598 LMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMG 657

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
            V+ G+  +   M+S +  +P + +   ++D+  +  ++NEA ++ + M  ++  + W  
Sbjct: 658 YVDKGLH-YFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRT 716

Query: 185 MIAGYVLAG 193
           +++   + G
Sbjct: 717 LLSNCKMQG 725


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/546 (37%), Positives = 325/546 (59%), Gaps = 13/546 (2%)

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA-GYSDKGLLLFRKMQEH 208
           V NS++ MY+K G +++A R+FD MP ++++TW  ++A    A G  ++ L     M   
Sbjct: 117 VSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRD 176

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ +TF+S L ACG+ G +     +H   +  G    V   +  SL+D Y+K G L 
Sbjct: 177 GVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDV--FVRSSLIDAYMKLGDLD 231

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
             RRVFD +  + ++ W+S+I G+AQ  +   A+ELF ++++     +   L+S++    
Sbjct: 232 GGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
              ++E G+Q+HA+  K     D  + N+++DMY KCG +++A  LF+ MP ++V++W+ 
Sbjct: 292 GMVMLEAGRQVHAHVLKYER--DLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+G  ++G + EA+ +F  M  + V P+ +  + VL ACSH+GLVE+   YF  +    
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P  EH++C+VD LGRAG+LDEA   I  M ++P   IW+TLL ACR+H    L    
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYA 469

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
              +L+L+ D+    V++SN +AD   W + E+  K  R +G+KK  GRSW+E++K +H 
Sbjct: 470 AREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHV 529

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD +HP ++ I Q L  +  R+   LG+V   ++ L D+  E KE+ L+ HSEK+AI
Sbjct: 530 FIAGDLSHPCSDTIVQELNRLIGRI-SALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAI 588

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
                 G ++   GK IR+ KNLR+CGDCH F K +SK    + ++RD  RFH F+ G C
Sbjct: 589 AF----GTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGAC 644

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 645 SCGDYW 650



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 201/406 (49%), Gaps = 16/406 (3%)

Query: 27  LLDYGVQLHGALVKM--GFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTAL 84
           L+   V+ HG L     G    + ++N L+ MYAK G ++ A  +FD+M ERNVV+WT +
Sbjct: 93  LIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTV 152

Query: 85  MCGFLQ-NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           +      +G  +  L     M    V PN +T S+ + A G    +     +H   +K G
Sbjct: 153 VAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVG 209

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
            + +  V +S+ID Y K G ++   R+FD M  + L+ WN++IAG+  +G     + LF 
Sbjct: 210 LDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFM 269

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M++ G   ++ T TS L+AC  +  +  G Q+H  ++     Y    ++  +L+D Y K
Sbjct: 270 RMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK----YERDLILHNALLDMYCK 325

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
           CG L +A  +F  + Q+ VISWS++I G AQ    AEA+ +F  ++   +  +   +  +
Sbjct: 326 CGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGV 385

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK 381
           +   +   LVE G   +  + K   G+       N +VD+  + G +DEA E   +M ++
Sbjct: 386 LFACSHAGLVEDG-WYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLE 444

Query: 382 -NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            + V W  ++     H     A    R++L   +EPD      +LS
Sbjct: 445 PDAVIWRTLLGACRMHKSGNLAAYAAREIL--KLEPDDQGARVLLS 488



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 14/295 (4%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSG--FPYSVKT----VIAGSLVDFYVKCGC 266
           D  + T  +K C   G+ G G  IH  +   G    YS        ++ SLV  Y K G 
Sbjct: 71  DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLSSMMG 325
           L +A R+FD + +++V++W++++   A  +    EA+     +    +  + +  SS++G
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLG 190

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
                 ++     +HA   KV    D  V +S++D Y+K G +D    +F+EM  +++V 
Sbjct: 191 ACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVV 247

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  II G+ + G    A+ LF +M       +     +VL AC+   ++E  ++  + + 
Sbjct: 248 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVL 307

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             +R    +  ++ ++D   + G L++A+ L   MP +  I+ W T++S    +G
Sbjct: 308 KYER---DLILHNALLDMYCKCGSLEDAEALFHRMPQRDVIS-WSTMISGLAQNG 358



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 6/175 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   LR C+  ++L+ G Q+H  ++K  +  DL+L+N L+DMY KCG +  A A+F +M 
Sbjct: 283 LTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMP 340

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R+V+SW+ ++ G  QNG +   L +F  M S  V PN  T+   + A      VE+G  
Sbjct: 341 QRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGW- 399

Query: 135 IHGMCMKSGFEWNPVV--GNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMI 186
            +   MK  F   P     N ++D+  + G+++EA     D+      + W  ++
Sbjct: 400 YYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/658 (33%), Positives = 365/658 (55%), Gaps = 71/658 (10%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN-GNAKACLSLFCQM 104
           +++ +N LI  Y +CG+++ A  VF+ M  ++ V+W +++  F +  G+ +    LF ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIH-------GMCMKSGFEWNPVVGNSIIDM 157
                 P   T+S NI    +L+   + + +H        M +K    WN     ++I  
Sbjct: 100 ------PQPNTVSYNI----MLACHWHHLGVHDARGFFDSMPLKDVASWN-----TMISA 144

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
            ++ G + EA R+F  MP K+ ++W+AM++GYV                           
Sbjct: 145 LAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYV--------------------------- 177

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDL 276
                ACG L +           +   +   +++VI   +++  Y+K G +  A R+F  
Sbjct: 178 -----ACGDLDAA----------VECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQE 222

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  +++++W+++I GY +     + + LFR + E  ++ +   L+S++   ++ + ++ G
Sbjct: 223 MSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLG 282

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           KQ+H    K P   DT+   S+V MY KCG + +A ELF ++P K+VV W  +I+GY +H
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQH 342

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G  K+A+ LF +M  + ++PD + ++AVL AC+H+GLV+   +YF+ +  D  ++ + EH
Sbjct: 343 GAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEH 402

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y+C+VD LGRAG+L EA +LI+SMP KP  AI+ TLL ACR+H +L L     + LL LD
Sbjct: 403 YACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELD 462

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
                 YV ++N++A    W+    +R+  +   + K+ G SW+E++  +H F   D  H
Sbjct: 463 PTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLH 522

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P    IH+ L ++EK+MK   G+V  +++ LHD+ EE KE+ L  HSEKLAI   L++  
Sbjct: 523 PELASIHEKLKDLEKKMKLA-GYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVP 581

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           L    G  IRVFKNLRVCGDCH   K +S I     +VRD TRFH F+ G CSC DYW
Sbjct: 582 L----GVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 1/164 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  CS    L  G Q+H  + K   S D      L+ MY+KCG++  A  +F ++ 
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VV W A++ G+ Q+G  K  L LF +M    +KP+  T    + A      V+ G+Q
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
             + M    G E  P     ++D+  + G+++EA  +   MP K
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/565 (36%), Positives = 323/565 (57%), Gaps = 10/565 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G   H   ++ G E + +  N +I+MYSKC  ++ A + F+ MP KSL++WN +I     
Sbjct: 62  GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQ 121

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                + L L  +MQ  G   +EFT +S L  C    ++    Q+H F I +    +   
Sbjct: 122 NAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNC-- 179

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +L+  Y KC  + +A ++F+ + +K+ ++WSS++ GY Q     EA+ +FR  +  
Sbjct: 180 FVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLM 239

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
               D F++SS +   A  A + +GKQ+HA + K   G +  VS+S++DMY KCG I EA
Sbjct: 240 GFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299

Query: 372 TELFN-EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
             +F   + V+++V W  +I+G+ +H  A EA+ LF KM      PD V Y+ VL+ACSH
Sbjct: 300 YLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSH 359

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GL EE Q+YF  +     + P + HYSC++D LGRAG + +A +LIE MP   + ++W 
Sbjct: 360 MGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWG 419

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LL++C+++G++E      + L  ++ +N  N+++++NI+A    W+E  R RKL R   
Sbjct: 420 SLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETD 479

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           ++K  G SW+E+  +IH F  G+  HP  + I+  L  +   +K +L +       LHD+
Sbjct: 480 VRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELK-KLNYKVDTSNDLHDV 538

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILK 669
           +E  K+  LR HSEKLAI       GL   P  + IR+ KNLR+CGDCH F+K +SK   
Sbjct: 539 EENRKQMLLRHHSEKLAITF-----GLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTS 593

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              +VRD  RFH F+ G CSCG++W
Sbjct: 594 REIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 200/366 (54%), Gaps = 10/366 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+K      G   H  ++++G   D++ +N LI+MY+KC  ++ A   F++M  +++
Sbjct: 50  LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSL 109

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  ++    QN   +  L L  QM       NEFT+S+ +       ++   MQ+H  
Sbjct: 110 VSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAF 169

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  + N  VG +++ +Y+KC  I +A++MF+ MP K+ +TW++M+AGYV  G+ ++ 
Sbjct: 170 SIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEA 229

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LL+FR  Q  G   D F  +S + AC  L ++  G Q+H     SGF  ++   ++ SL+
Sbjct: 230 LLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNI--YVSSSLI 287

Query: 259 DFYVKCGCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           D Y KCGC+ EA  VF  ++E +S++ W+++I G+A+     EAM LF ++++R    D 
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATE 373
                ++   +   L E+G++      +     PS L  S    ++D+  + GL+ +A +
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSC---MIDILGRAGLVHKAYD 404

Query: 374 LFNEMP 379
           L   MP
Sbjct: 405 LIERMP 410



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ ++  C+    L  G Q+H    K GF  ++ +++ LIDMYAKCG +  A  VF  +L
Sbjct: 248 ISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVL 307

Query: 75  E-RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           E R++V W A++ GF ++  A   + LF +M      P++ T    + A   +   E G 
Sbjct: 308 EVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQ 367

Query: 134 QIHGMCMKSGFEWNPVV--GNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYV 190
           +   + M      +P V   + +ID+  + G +++A  + + MP  +  + W +++A   
Sbjct: 368 KYFDL-MVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCK 426

Query: 191 LAG 193
           + G
Sbjct: 427 IYG 429


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/592 (35%), Positives = 343/592 (57%), Gaps = 13/592 (2%)

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M  + +  +  T S  IK   V  +V+    +H     +G+E    + N++I+MY K G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           ++EA  +FD MP +++++W  MI+ Y  +  + K L     M   G  P+ +T++S L+A
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  L ++    Q+HG ++  G    V   +  +L+D Y K G   +A  VF+ +    ++
Sbjct: 127 CDGLLNL---RQLHGSILKVGLESDV--FVRSALIDTYSKLGEQHDALNVFNEMITGDLV 181

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
            W+S+I G+AQ  +  E + L+++++      D   L+S++      AL+E G+Q+H + 
Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHV 241

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEA 402
            K     D  ++N+++DMY KCG +++A  LF  M   K+V++W+ +I G  ++G + +A
Sbjct: 242 LKYDQ--DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADA 299

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF  M     +P+ +  L VL ACSH+GLV +   YF  +     + P  EHY CI+D
Sbjct: 300 LKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIID 359

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
            LGRAG+LDEA  LI  M  +P    W+ LL ACRVH +++L     + +L+LD  +   
Sbjct: 360 LLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGT 419

Query: 523 YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
           Y+++SNI+A++  W +   +R+  R++G+KK  G SW+EV K++H F  GD++HP  E+I
Sbjct: 420 YILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEI 479

Query: 583 HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
            + L ++ +R+   LG+V    + L D++ E  E+SL+ HSEKLAI    V G ++    
Sbjct: 480 KRELSQLIQRLM-RLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAI----VFGLMSLPNQ 534

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K I + KNLR+CGDCH F K +S++   V V+RD  R+H F GGVCSCGDYW
Sbjct: 535 KTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 206/394 (52%), Gaps = 18/394 (4%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR+S   ++     ++ ++CC     +     +H  +   G+     L N LI+MY K G
Sbjct: 10  NRLSADAIT----YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFG 65

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            ++ A  +FD+M +RNVVSWT ++  +  +      L     M    V+PN +T S+ ++
Sbjct: 66  LLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLR 125

Query: 122 A-SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           A  G+L    N  Q+HG  +K G E +  V +++ID YSK G  ++A  +F+ M    L+
Sbjct: 126 ACDGLL----NLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLV 181

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WN++I G+      D+ L L+++M+    + D+ T TS L+AC  L  +  G Q+H  +
Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHV 241

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLA 299
           +     Y    ++  +L+D Y KCG L +A  +F  ++ +K VISWS++I G AQ    A
Sbjct: 242 L----KYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSA 297

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           +A++LF  ++ +  + +   +  ++   +   LV  G   +  + K   G+D    +   
Sbjct: 298 DALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGC 356

Query: 358 IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
           I+D+  + G +DEA +L +EM  + + VTW +++
Sbjct: 357 IIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILL 390



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 5/192 (2%)

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           M+    +    L  D    S ++        V+Q + +H +         T + N++++M
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y+K GL+DEA  LF+EMP +NVV+WT +I+ Y    L  +A+     ML + V P+   Y
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
            +VL AC   GL+   Q + S L     ++  +   S ++D+  + G   +A N+   M 
Sbjct: 121 SSVLRAC--DGLLNLRQLHGSIL--KVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM- 175

Query: 482 VKPSIAIWQTLL 493
           +   + +W +++
Sbjct: 176 ITGDLVVWNSII 187


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/543 (37%), Positives = 328/543 (60%), Gaps = 12/543 (2%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N +I+MY K G +++A  +FD MP +++++W  MI+ Y  A  +DK L     M   G  
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P+ FT++S L+AC  L ++    Q+H  +I  G    V   +  +L+D Y + G L  A 
Sbjct: 64  PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDV--FVRSALIDVYSRWGELENAL 118

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           RVFD +    ++ WSS+I G+AQ  +  EA+ LF++++          L+S++      A
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           L+E G+Q+H +  K     D  ++N+++DMY KCG +++A  +F  M  K+V++W+ +I 
Sbjct: 179 LLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           G  ++G +KEA+ LF  M +  ++P+ V  + VL ACSH+GLVEE   YF  +     + 
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
           P  EHY C++D LGRAGRL EA +LI  M  +P    W+ LL+ACRVH ++++     + 
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
           +LRLD  +   YV++SNI+A+   WN+   +R+   ++G+KK  G SW+EV K+IH F  
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416

Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
           GD +HP   +I+  L ++  ++   +G+V    + L D++ E  ++SLR HSEKLAI   
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLM-GVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAI--- 472

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
            V G ++   G+ IR+ KNLR+CGDCH F K L+K+ + + V+RD  R+H F+ G+CSCG
Sbjct: 473 -VFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCG 531

Query: 692 DYW 694
           D+W
Sbjct: 532 DFW 534



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 11/377 (2%)

Query: 49  LNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           L N LI+MY K G ++ A  VFDKM +RNVVSWT ++  +         L     M    
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V+PN FT S+ ++A   L ++    Q+H   +K G + +  V +++ID+YS+ G +  A 
Sbjct: 62  VRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           R+FD M    L+ W+++IAG+      D+ L LF++M+  G +  + T TS L+AC  L 
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
            +  G Q+H  ++     Y    ++  +L+D Y KCG L +A  VF  + +K VISWS++
Sbjct: 179 LLELGRQVHVHVL----KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I G AQ     EA++LF  ++   ++ +   +  ++   +   LVE+G   + ++ K   
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG-LYYFHSMKELF 293

Query: 349 GLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGL 405
           G+D    +   ++D+  + G + EA +L NEM  + + VTW  ++     H     A+  
Sbjct: 294 GIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHA 353

Query: 406 FRKMLLDDVEPDGVAYL 422
            +++L  D +  G   L
Sbjct: 354 AKQILRLDPQDAGTYVL 370



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 20/285 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH  ++K+G   D+ + + LID+Y++ GE+  A  VFD+M+  ++V W++++ GF QN 
Sbjct: 84  QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNS 143

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +    L LF +M  +     + TL++ ++A   L+ +E G Q+H   +K  ++ + ++ N
Sbjct: 144 DGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNN 201

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++DMY KCG + +A  +F  M  K +I+W+ MIAG    GYS + L LF  M+  G  P
Sbjct: 202 ALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKP 261

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--------GSLVDFYVKC 264
           +  T    L AC   G V  G           + +S+K +          G ++D   + 
Sbjct: 262 NYVTIVGVLFACSHAGLVEEGLY---------YFHSMKELFGIDPGREHYGCMIDLLGRA 312

Query: 265 GCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL 308
           G L EA  + + +E +   ++W +L+       N+  A+   +Q+
Sbjct: 313 GRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 6/188 (3%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M R  F  ++++  L   LR C+   LL+ G Q+H  ++K  +  DL+LNN L+DMY KC
Sbjct: 155 MKRAGF--LAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKC 210

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A AVF +M+E++V+SW+ ++ G  QNG +K  L LF  M    +KPN  T+   +
Sbjct: 211 GSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVL 270

Query: 121 KASGVLSSVENGM-QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-S 178
            A      VE G+   H M    G +        +ID+  + GR++EA  + + M  +  
Sbjct: 271 FACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPD 330

Query: 179 LITWNAMI 186
            +TW A++
Sbjct: 331 AVTWRALL 338


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/533 (37%), Positives = 312/533 (58%), Gaps = 7/533 (1%)

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G +  A R+F      +L  WN +I GY ++      + L+R M   G  P+ +TF   L
Sbjct: 55  GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           KAC  L  +  G ++H  ++  G  +  +T +   L+  Y  CGC+  A  +FD + +  
Sbjct: 115 KACCKLLRLCEGQELHSQIVKVGLDF--ETPLVNGLIKLYAACGCMDYACVMFDEMPEPD 172

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
             SWS+++ GYAQ     EA++LFR+++  ++  D F L+S++GV  D   ++ GK +H+
Sbjct: 173 SASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHS 232

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
           Y  K    +D  +  ++V MY KCG +D A ++F  M  ++V  W+ +I GY  HG  ++
Sbjct: 233 YMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEK 292

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF  M      P+ V + +VLSACSHSGLVE+  + F  +  + ++ P+I+HY C+V
Sbjct: 293 ALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMV 352

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D   RAG +  A   I++MP++P++ +W+TLL AC+ HG  +LG  +   +L+LD  +P 
Sbjct: 353 DLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPE 412

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
           NYV++SN++A  G W+   ++R L + K  KK  G S +E++  +H F  GD++HP  EK
Sbjct: 413 NYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREK 472

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I+ +L +M +++K ++G V      LHDI EE KE +L +HSE+LAI   L    L+   
Sbjct: 473 IYGMLHQMARKLK-QVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGL----LHTPN 527

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G  IR+ KNLRVC DCHE IK +S++     +VRD  RFH F    CSC DYW
Sbjct: 528 GSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 6/274 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C K L L  G +LH  +VK+G  F+  L N LI +YA CG M+ AC +FD+M E + 
Sbjct: 114 LKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDS 173

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW+ ++ G+ QNG A   L LF +M + +V  + FTL++ +   G L +++ G  +H  
Sbjct: 174 ASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSY 233

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K G + + V+G +++ MYSKCG ++ A ++F  M  + +  W+ MIAGY + G+ +K 
Sbjct: 234 MDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKA 293

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           L LF  M+    IP+  TFTS L AC   G V  G QI   + T    Y +   I   G 
Sbjct: 294 LQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTE---YKITPQIKHYGC 350

Query: 257 LVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
           +VD + + G +  A +    +  + +V+ W +L+
Sbjct: 351 MVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLL 384



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 187/392 (47%), Gaps = 9/392 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALMCGF 88
            +Q H  +V+   + D  L + LI+  A    G +  A  +F      N+  W  ++ G+
Sbjct: 25  AIQAH--MVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGY 82

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
             + +    ++L+  M    + PN +T    +KA   L  +  G ++H   +K G ++  
Sbjct: 83  SISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFET 142

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            + N +I +Y+ CG ++ A  MFD MP     +W+ M++GY   G + + L LFR+MQ  
Sbjct: 143 PLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAE 202

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
               D FT  S +  CG LG++  G  +H ++   G    +  V+  +LV  Y KCG L 
Sbjct: 203 NVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGV--KIDVVLGTALVGMYSKCGSLD 260

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            A +VF  + ++ V +WS++I GYA   +  +A++LF  ++      +    +S++   +
Sbjct: 261 NALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACS 320

Query: 329 DFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
              LVE+G QI      +            +VD++ + G++  A +    MP++ NVV W
Sbjct: 321 HSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLW 380

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPD 417
             ++     HG       + RK+L LD   P+
Sbjct: 381 RTLLGACKTHGYKDLGEHISRKILKLDPSSPE 412



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 7/235 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           S+   LA  +  C     LD G  +H  + K G   D++L   L+ MY+KCG ++ A  V
Sbjct: 206 SDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKV 265

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F  M ER+V +W+ ++ G+  +G+ +  L LF  M  S   PN  T ++ + A      V
Sbjct: 266 FQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLV 325

Query: 130 ENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMI 186
           E G QI    M + ++  P + +   ++D++ + G +  A +    MP + +++ W  ++
Sbjct: 326 EKGHQIFET-MWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLL 384

Query: 187 AGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
                 GY D G  + RK ++     P+ +   S + A  SLG      Q+   +
Sbjct: 385 GACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYA--SLGRWSSVCQVRSLM 437


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/650 (35%), Positives = 370/650 (56%), Gaps = 24/650 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGE--MNGACAVFDKMLE 75
           +R CS +  +  G    G L+K G F  D+ +   LIDM+ K GE     A  VFDKM E
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE 231

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            NVV+WT ++   +Q G  +  +  F  M  S  + ++FTLS+   A   L ++  G Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVL- 191
           H   ++SG   +  V  S++DMY+KC   G +++  ++FD M   S+++W A+I GY+  
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 192 AGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              + + + LF +M   G + P+ FTF+S  KACG+L     G Q+ G     G   +  
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL--ASN 407

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + +A S++  +VK   + +A+R F+ + +K+++S+++ + G  +  N  +A +L  ++ E
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R L V  F  +S++   A+   + +G+QIH+   K+    +  V N+++ MY KCG ID 
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A+ +FN M  +NV++WT +ITG+ KHG A   +  F +M+ + V+P+ V Y+A+LSACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLV E   +F+ +  D ++KP++EHY+C+VD L RAG L +A   I +MP +  + +W+
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           T L ACRVH + ELG+     +L LD + P  Y+ +SNI+A AG W E   +R+  + + 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--ELGFVYGVKYALH 608
           L K  G SW+EV  +IH FY GD  HP     HQ+  E+++ + E    G+V      LH
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHP---NAHQIYDELDRLITEIKRCGYVPDTDLVLH 764

Query: 609 DIQEESKEES----LRVHSEKLAIGLALVRGGLNEQPGKVIRV-FKNLRV 653
            ++EE+ E      L  HSEK+A+   L+      +P K+I+  FK L V
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLISTS-KSRPLKMIQTSFKILVV 813



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 243/498 (48%), Gaps = 28/498 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML---E 75
           L+ C +      G  +H  L++     D +L N LI +Y+K G+   A  VF+ M    +
Sbjct: 69  LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW+A+M  +  NG     + +F +     + PN++  +  I+A      V  G   
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188

Query: 136 HGMCMKSG-FEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            G  MK+G FE +  VG S+IDM+ K       A ++FD M   +++TW  MI   +  G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  + +  F  M   G   D+FT +S   AC  L ++  G Q+H + I SG    V+   
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC-- 306

Query: 254 AGSLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQL- 308
             SLVD Y KC   G + + R+VFD +E  SV+SW++LI GY +  NLA EA+ LF ++ 
Sbjct: 307 --SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  ++ + F  SS      + +    GKQ+   A K     ++SV+NS++ M++K   +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           ++A   F  +  KN+V++   + G  ++   ++A  L  ++   ++      + ++LS  
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484

Query: 429 SHSGLVEESQEYFSRL------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           ++ G + + ++  S++      CN       I  YS       + G +D A  +   M  
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS-------KCGSIDTASRVFNFMEN 537

Query: 483 KPSIAIWQTLLSACRVHG 500
           +  I+ W ++++    HG
Sbjct: 538 RNVIS-WTSMITGFAKHG 554



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 232/478 (48%), Gaps = 14/478 (2%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           L+   L  G+ +  +S    M    ++P +  T S+ +K+         G  +H   ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVLAGYSDKGL 199
             E + V+ NS+I +YSK G   +A  +F+ M     + +++W+AM+A Y   G     +
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            +F +  E G +P+++ +T+ ++AC +   VG G    GFL+ +G  +     +  SL+D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH-FESDVCVGCSLID 210

Query: 260 FYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
            +VK     E A +VFD + + +V++W+ +I    Q     EA+  F  +     + D F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELF 375
            LSS+    A+   +  GKQ+H++A +  SGL   V  S+VDMY KC   G +D+  ++F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIR--SGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 376 NEMPVKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGL 433
           + M   +V++WT +ITGY K+  LA EA+ LF +M+    VEP+   + +   AC +   
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
               ++   +    + +       + ++    ++ R+++A+   ES+  K  ++    L 
Sbjct: 389 PRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
             CR     +  + + EI  R  G +   +  + +  A+ GS  + E++       GL
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/567 (36%), Positives = 319/567 (56%), Gaps = 38/567 (6%)

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
           SK G +N A  +FD +P      +N +  GY+    +   + ++ +M      P++FT+ 
Sbjct: 65  SKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYP 124

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
             ++AC    ++  G QIH  ++  GF          +L+  YV    L +ARRVFD + 
Sbjct: 125 PLIRACCIDYAIEEGKQIHAHVLKFGF--GADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182

Query: 279 QKSVISWSSLILGYAQ---------------EEN----------------LAEAMELFRQ 307
           Q+ V+SW+SLI GY+Q               E N                L EA  LF +
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           +R  ++ +D FV +SM+        +EQGK IH Y  K    LD+ ++ +++DMY KCG 
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 302

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +++A+E+FNE+P K + +W  +I G   HG  + A+ LF++M  + V PDG+ ++ VLSA
Sbjct: 303 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C+HSGLVEE + YF  +     +KP +EH+ C+VD LGRAG L+EA+ LI  MPV P   
Sbjct: 363 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 422

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +   L+ ACR+HG+ ELG ++G+ ++ L+  N   YV+++N++A AG W +  ++RKL  
Sbjct: 423 VLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMN 482

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+KK  G S +E +  +  F  G   HP  ++I+  L E+ + ++  +G+V      L
Sbjct: 483 DRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIR-SIGYVPDTDGVL 541

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HDI EE KE  L  HSEKLAI   L    L  +PG+ +R+ KNLR+C DCH+  K +SK+
Sbjct: 542 HDIDEEEKENPLYYHSEKLAIAFGL----LKTKPGETLRISKNLRICRDCHQASKLISKV 597

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                ++RD  RFH F  G CSC DYW
Sbjct: 598 YDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 221/455 (48%), Gaps = 41/455 (9%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q H  ++++G S D      +I   A  K G++N A  VFDK+   +   +  +  G+L+
Sbjct: 38  QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLR 97

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
              A+ C+ ++ +M   SV PN+FT    I+A  +  ++E G QIH   +K GF  +   
Sbjct: 98  WQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFS 157

Query: 151 GNSIIDMY-------------------------------SKCGRINEAARMFDVMPAKSL 179
            N++I MY                               S+ G +++A  +F++MP ++ 
Sbjct: 158 LNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNS 217

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMIA YV +    +   LF +M+    + D+F   S L AC  LG++  G  IHG+
Sbjct: 218 VSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGY 277

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +  SG     K  +A +++D Y KCGCL +A  VF+ + QK + SW+ +I G A      
Sbjct: 278 IEKSGIELDSK--LATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 335

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
            A+ELF+++    +  DG    +++   A   LVE+GK    Y  +V  GL   + +   
Sbjct: 336 AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEV-LGLKPGMEHFGC 394

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK-HGLAKEAVGLFRKMLLDDVEP 416
           +VD+  + GL++EA +L NEMPV         + G  + HG  +    + +K++  ++EP
Sbjct: 395 MVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVI--ELEP 452

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
                  +L+    S    E      +L ND+ +K
Sbjct: 453 HNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVK 487



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C  +  ++ G Q+H  ++K GF  D    N+LI MY     +  A  VFD M +R+V
Sbjct: 127 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDV 186

Query: 79  VSWTALMCGF-------------------------------LQNGNAKACLSLFCQMGSS 107
           VSWT+L+ G+                               +Q+       +LF +M   
Sbjct: 187 VSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE 246

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           +V  ++F  ++ + A   L ++E G  IHG   KSG E +  +  ++IDMY KCG + +A
Sbjct: 247 NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKA 306

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
           + +F+ +P K + +WN MI G  + G  +  + LF++M+     PD  TF + L AC   
Sbjct: 307 SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHS 366

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           G V  G     ++ T            G +VD   + G L EAR++ +
Sbjct: 367 GLVEEGKHYFQYM-TEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLIN 413



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 151/340 (44%), Gaps = 46/340 (13%)

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV--KCGCLVEARRVFDLIE 278
           L +C ++  +    Q H  +I  G   S      G ++ F    K G L  A  VFD I 
Sbjct: 27  LDSCSTMAEL---KQYHSQIIRLGL--SADNDAMGRVIKFCAISKSGDLNYALEVFDKIP 81

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM-GVFADFALVEQGK 337
                 ++++  GY + +     + ++ ++  +S+  + F    ++     D+A +E+GK
Sbjct: 82  HPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYA-IEEGK 140

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           QIHA+  K   G D    N+++ MY+    +++A  +F+ MP ++VV+WT +ITGY + G
Sbjct: 141 QIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWG 200

Query: 398 LA-------------------------------KEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                                             EA  LF +M L++V  D     ++LS
Sbjct: 201 FVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 260

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           AC+  G +E+ + +         ++   +  + ++D   + G L++A  +   +P K  I
Sbjct: 261 ACTGLGALEQGK-WIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK-GI 318

Query: 487 AIWQTLLSACRVHGD----LELGREVGEILLRLDGDNPVN 522
           + W  ++    +HG     +EL +E+   ++  DG   VN
Sbjct: 319 SSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVN 358



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L  C+    L+ G  +HG + K G   D  L   +IDMY KCG +  A  VF+++ +
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ- 134
           + + SW  ++ G   +G  +A + LF +M    V P+  T    + A      VE G   
Sbjct: 316 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 375

Query: 135 ----IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                  + +K G E        ++D+  + G + EA ++ + MP
Sbjct: 376 FQYMTEVLGLKPGMEHF----GCMVDLLGRAGLLEEARKLINEMP 416


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/681 (32%), Positives = 371/681 (54%), Gaps = 18/681 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++CC++   LD G   HG ++K+G   D+   N L+  YAK G +  A  VFD M  R++
Sbjct: 114 VKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDI 173

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W  ++ G++ NG     L+ F +M  +  V+ +   +   + A  +  S   G +IHG
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHG 233

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G E +  VG S++DMY KCG +  A  +F  MP ++++TWN MI GY L    D+
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
               F +M+  G   +  T  + L AC    S   G  +HG+++   F   V  V+  +L
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV--VLETAL 351

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y K G +  + ++F  I  K+++SW+++I  Y  +E   EA+ LF +L  + L  D 
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F +S+++  F     +   +QIH+Y   +    +T + N+++ MY + G +  + E+F++
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  K+V++W  +I GY  HG  K A+ +F +M  + ++P+   +++VL+ACS SGLV+E 
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             +F+ +  +  M P+IEHY C+ D LGR G L E    IESMP+ P+  +W +LL+A R
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASR 591

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
              D+++     E + +L+ DN   Y+++S+++ADAG W + ER+R L + KGL++    
Sbjct: 592 NQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPI 651

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S VE+      F  GD +H  +  IH+V   + +++KE             D + +S   
Sbjct: 652 SLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKET-----------DDTRNQSYPV 700

Query: 618 SLRVHS----EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            +   +     K ++ LA+V G ++ + G  I V KN+R+C  CH  +K +S+      V
Sbjct: 701 PVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIV 760

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           V D+  +H F  G C CGDYW
Sbjct: 761 VGDSKIYHEFSDGSCCCGDYW 781



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 192/398 (48%), Gaps = 17/398 (4%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           +P+ FT    +K    L  ++ G   HGM +K G E +    NS++  Y+K G + +A R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLG 228
           +FD MP + ++TWN M+ GYV  G     L  F++M +  E+  D     + L AC    
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           S   G +IHG++I  G    +K  +  SL+D Y KCG +  AR VF  +  ++V++W+ +
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIK--VGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCM 281

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I GYA  E   EA + F Q+R   LQV+     +++   A       G+ +H Y  +   
Sbjct: 282 IGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF 341

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
                +  ++++MY K G ++ + ++F ++  K +V+W  +I  Y    +  EA+ LF +
Sbjct: 342 LPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLE 401

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC------NDKRMKPRIEHYSCIVD 462
           +L   + PD      V+ A    G +   ++  S +       N   M   +  Y+    
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYA---- 457

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              R+G +  ++ + + M  K  I+ W T++    +HG
Sbjct: 458 ---RSGDVVASREIFDKMVSKDVIS-WNTMIMGYAIHG 491


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/553 (35%), Positives = 339/553 (61%), Gaps = 8/553 (1%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG-EMNGACAVFDKML 74
           A  L+ C+K L  ++G+Q+H  ++K G  FD  + N L+ +Y K G +      VFD + 
Sbjct: 63  ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF 122

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++V+SWT+++ G+++ G     L LF +M +  V+PN FTLS  IKA   L  ++ G  
Sbjct: 123 VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRI 182

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG+ +  GF+ N V+ +++IDM+ +   +++A ++FD +     I W ++I+      +
Sbjct: 183 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 242

Query: 195 SDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            D+ L  F  MQ +HG  PD FTF + L ACG+LG +  G ++H  +IT+GF  +V  V+
Sbjct: 243 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV--VV 300

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLVD Y KCG + E++R+FD +  K+ +SWS+L+ GY Q  +    +++FR++     
Sbjct: 301 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME---- 356

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           +VD +   +++   A  A V QGK++H    +     D  V +++VD+Y KCG I+ A  
Sbjct: 357 KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQT 416

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F++MPV+N++TW  +I G+ ++G  +EA+ +F +M+ + ++PD ++++ +L ACSH GL
Sbjct: 417 IFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGL 476

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V+E +EYF  +  D  +K  IEHYSC+VD LGRAG L+EA+ LIE+   +   ++W  LL
Sbjct: 477 VDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 536

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            AC    + E+   + + ++ L+ D  ++YV+++N++   G WN+  R+R+L + +G+ K
Sbjct: 537 GACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK 596

Query: 554 VAGRSWVEVDKEI 566
           + G+SW+E    +
Sbjct: 597 MPGKSWIETKNNL 609



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 15/400 (3%)

Query: 108 SVKPNEFTLSTNIKASGVLS-----SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           S+ P E +    + AS + +     +  +G+QIH   +KSG E++  VGNS++ +Y K G
Sbjct: 49  SIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG 108

Query: 163 R-INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
               E  ++FD +  K +I+W +MI+GYV  G     L LF KM  +G  P+ FT ++ +
Sbjct: 109 TDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVI 168

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           KAC  LG +  G   HG ++  GF      VIA +L+D + +   L +AR++FD + +  
Sbjct: 169 KACSELGDLKLGRIFHGVVLGRGF--DSNYVIASALIDMHGRNCALDDARQLFDELLEPD 226

Query: 282 VISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            I W+S+I    + +   EA+  F  + R+  +  DGF   +++    +   ++QGK++H
Sbjct: 227 AICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVH 286

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           A         +  V +S+VDMY KCG + E+  +F+ MP+KN V+W+ ++ GY ++G  K
Sbjct: 287 AKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFK 346

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
             + +FRKM     + D   +  +L  C+    V + +E   +       +  I   S +
Sbjct: 347 SVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SAL 401

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           VD   + G ++ A+ + + MPV+ ++  W +++     +G
Sbjct: 402 VDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNG 440



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 195/360 (54%), Gaps = 10/360 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  ++ CS+   L  G   HG ++  GF  + ++ + LIDM+ +   ++ A  +FD++L
Sbjct: 164 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 223

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGM 133
           E + + WT+++    +N      L  F  M     + P+ FT  T + A G L  ++ G 
Sbjct: 224 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 283

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   + +GF  N VV +S++DMY KCG + E+ R+FD MP K+ ++W+A++ GY   G
Sbjct: 284 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 343

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                + +FRKM++     D + F + L+ C  L +V  G ++H   I  G    V  ++
Sbjct: 344 DFKSVIQIFRKMEK----VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV--IV 397

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KCGC+  A+ +FD +  +++I+W+S+I G+AQ     EA+ +F Q+ +  +
Sbjct: 398 ESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 457

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
           + D      ++   +   LV++G++      K   G+   + +   +VD+  + GL++EA
Sbjct: 458 KPDYISFIGILFACSHRGLVDEGREYFISMTK-DYGIKVGIEHYSCMVDLLGRAGLLEEA 516



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           S IL   +   L+ A++L + +    +     + +S++           G QIHA+  K 
Sbjct: 29  SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 88

Query: 347 PSGLDTSVSNSIVDMYLKCGL-IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               D  V NS++ +Y K G    E  ++F+ + VK+V++WT +I+GY + G    ++ L
Sbjct: 89  GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 148

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F KML   VEP+     AV+ ACS  G ++  +  F  +   +         S ++D  G
Sbjct: 149 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR-IFHGVVLGRGFDSNYVIASALIDMHG 207

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           R   LD+A+ L + + ++P    W +++SA
Sbjct: 208 RNCALDDARQLFDEL-LEPDAICWTSIISA 236


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/651 (33%), Positives = 354/651 (54%), Gaps = 72/651 (11%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC------- 86
           +H  ++   FS ++ + N LID+Y KC  ++ A  +FD+M +RN  +W +L+        
Sbjct: 37  VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96

Query: 87  ------------------------GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
                                   GF Q+   +  L  F +M       NE++  + + A
Sbjct: 97  LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
              L  +  G Q+H +  KS +  +  +G+++IDMYSKCG +  A  +F  M  ++L+TW
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTW 216

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N++I  Y   G + + L +F +M + G  PDE T  S + AC SL ++  G QIH  ++ 
Sbjct: 217 NSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE------------------------ 278
           +   +    V+  +LVD Y KC  + EARRVFD +                         
Sbjct: 277 TN-KFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAAR 335

Query: 279 -------QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
                  Q++V+SW++LI GY Q     EA+ LFR L+  S+    +   +++   A+ A
Sbjct: 336 FMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLA 395

Query: 332 LVEQGKQIHAYAAK----VPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
            +  G+Q H +  K      SG   D  V NS++DMY+KCG I++ + +F +M  ++ V+
Sbjct: 396 DLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVS 455

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  II GY ++G   EA+ +FRKML+   +PD V  + VL ACSH+GLVEE + YF  + 
Sbjct: 456 WNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM- 514

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            +  + P  +HY+C+VD LGRAG L+EAKNLIE+MPV P   +W +LL+AC+VHG++E+G
Sbjct: 515 EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMG 574

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +   E LL +D  N   YV++SN++A+ G W +  R+RKL R +G+ K  G SW+EV+  
Sbjct: 575 KHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESR 634

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK-YALHDIQEESK 615
           +H F   D +HP  ++I+ VL  + ++MK  +G++     +  +D Q +S+
Sbjct: 635 VHVFLVKDKSHPHRKQIYSVLKMLTEQMK-RVGYIPDANDFEAYDEQSKSE 684



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 231/436 (52%), Gaps = 43/436 (9%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+R  F L         +L  C+  + L+ G Q+H  + K  +S D+ + + LIDMY+KC
Sbjct: 138 MHREDFLL--NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VF  M+ERN+V+W +L+  + QNG A   L +F +M  S ++P+E TL++ +
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255

Query: 121 KASGVLSSVENGMQIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFD------- 172
            A   L +++ G+QIH   +K+  F  + V+GN+++DMY+KC ++NEA R+FD       
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315

Query: 173 ------------------------VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
                                    M  +++++WNA+IAGY   G +++ L LFR ++  
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS----VKTVIAGSLVDFYVKC 264
              P  +TF + L AC +L  +  G Q H  ++  GF +         +  SL+D Y+KC
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G + +  RVF+ ++++  +SW+++I+GYAQ    AEA+++FR++     + D   +  ++
Sbjct: 436 GSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 495

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK- 381
              +   LVE+G+  H + +    GL     +   +VD+  + G ++EA  L   MPV  
Sbjct: 496 CACSHAGLVEEGR--HYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNP 553

Query: 382 NVVTWTVIITGYGKHG 397
           + V W  ++     HG
Sbjct: 554 DAVVWGSLLAACKVHG 569


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/563 (37%), Positives = 327/563 (58%), Gaps = 9/563 (1%)

Query: 134 QIHGMCMKSGFEWN-PVVGNSII-DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           QIH   ++ G   N P +G  +I  + S    ++ A  +F V+   ++ TWN +I GY  
Sbjct: 36  QIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAE 95

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           +       L +R+M      PD  T+   LKA     +V  G  IH   I +GF   V  
Sbjct: 96  SDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLV-- 153

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  SL+  Y  CG    A +VF+L++++ +++W+S+I G+A      EA+ LFR++   
Sbjct: 154 FVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVE 213

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ DGF + S++   A+   +E G+++H Y  KV    ++ V+NS++D+Y KCG I EA
Sbjct: 214 GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREA 273

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+EM  +N V+WT +I G   +G  +EA+ LF++M    + P  + ++ VL ACSH 
Sbjct: 274 QRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHC 333

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           G+++E  EYF R+  +  + PRIEHY C+VD L RAG + +A   I++MPV+P+  IW+T
Sbjct: 334 GMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 393

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL AC +HG L LG      LL L+  +  +YV++SN++A    W++ + +R+     G+
Sbjct: 394 LLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGV 453

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G S VE+   ++ F  GD +HP ++ ++ +L ++ + +K E G+V      L DI+
Sbjct: 454 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLE-GYVPHTANVLADIE 512

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           EE KE++L  HSEK+AI   L    LN  PG  IRV KNLRVC DCH  IK ++KI    
Sbjct: 513 EEEKEQALSYHSEKVAIAFML----LNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDRE 568

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
            V+RD +RFH F GG CSC DYW
Sbjct: 569 IVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 191/374 (51%), Gaps = 16/374 (4%)

Query: 33  QLHGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           Q+H   ++ G S    LNN       +  + +    M+ A  VF  +   NV +W  ++ 
Sbjct: 36  QIHAFSIRHGVS----LNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIR 91

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+ ++ N       + QM  S V+P+  T    +KA     +V  G  IH + +++GFE 
Sbjct: 92  GYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 151

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              V NS++ +Y+ CG    A ++F++M  + L+ WN+MI G+ L G  ++ L LFR+M 
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PD FT  S L A   LG++  G ++H +L+  G   S  + +  SL+D Y KCG 
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGL--SKNSHVTNSLLDLYAKCGA 269

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           + EA+RVF  + +++ +SW+SLI+G A      EA+ELF+++  + L         ++  
Sbjct: 270 IREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYA 329

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NV 383
            +   ++++G + +    K   G+   + +   +VD+  + GL+ +A E    MPV+ N 
Sbjct: 330 CSHCGMLDEGFE-YFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 388

Query: 384 VTWTVIITGYGKHG 397
           V W  ++     HG
Sbjct: 389 VIWRTLLGACTIHG 402



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 149/282 (52%), Gaps = 22/282 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+  SK+L +  G  +H   ++ GF   + + N L+ +YA CG+   A  VF+ M ER++
Sbjct: 125 LKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDL 184

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W +++ GF  NG     L+LF +M    V+P+ FT+ + + AS  L ++E G ++H  
Sbjct: 185 VAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVY 244

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G   N  V NS++D+Y+KCG I EA R+F  M  ++ ++W ++I G  + G+ ++ 
Sbjct: 245 LLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEA 304

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF++M+  G +P E TF   L AC   G           ++  GF Y  +      ++
Sbjct: 305 LELFKEMEGQGLVPSEITFVGVLYACSHCG-----------MLDEGFEYFRRMKEECGII 353

Query: 259 DFYVKCGCLVE-------ARRVFDLIE----QKSVISWSSLI 289
                 GC+V+        ++ ++ I+    Q + + W +L+
Sbjct: 354 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 395


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/681 (32%), Positives = 371/681 (54%), Gaps = 18/681 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++CC++   LD G   HG ++K+G   D+   N L+  YAK G +  A  VFD M  R++
Sbjct: 114 VKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDI 173

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W  ++ G++ NG     L+ F +M  +  V+ +   +   + A  +  S   G +IHG
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHG 233

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G E +  VG S++DMY KCG +  A  +F  MP ++++TWN MI GY L    D+
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
               F +M+  G   +  T  + L AC    S   G  +HG+++   F   V  V+  +L
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV--VLETAL 351

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y K G +  + ++F  I  K+++SW+++I  Y  +E   EA+ LF +L  + L  D 
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F +S+++  F     +   +QIH+Y   +    +T + N+++ MY + G +  + E+F++
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  K+V++W  +I GY  HG  K A+ +F +M  + ++P+   +++VL+ACS SGLV+E 
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             +F+ +  +  M P+IEHY C+ D LGR G L E    IESMP+ P+  +W +LL+A R
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASR 591

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
              D+++     E + +L+ DN   Y+++S+++ADAG W + ER+R L + KGL++    
Sbjct: 592 NQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPI 651

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEE 617
           S VE+      F  GD +H  +  IH+V   + ++++E             D + +S   
Sbjct: 652 SLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEET-----------DDTRNQSYPV 700

Query: 618 SLRVHS----EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            +   +     K ++ LA+V G ++ + G  I V KN+R+C  CH  +K +S+      V
Sbjct: 701 PVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHALKLISRYSGRRIV 760

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           V D+  +H F  G C CGDYW
Sbjct: 761 VGDSKIYHEFSDGSCCCGDYW 781



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 192/398 (48%), Gaps = 17/398 (4%)

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           +P+ FT    +K    L  ++ G   HGM +K G E +    NS++  Y+K G + +A R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLG 228
           +FD MP + ++TWN M+ GYV  G     L  F++M +  E+  D     + L AC    
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           S   G +IHG++I  G    +K  +  SL+D Y KCG +  AR VF  +  ++V++W+ +
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIK--VGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCM 281

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I GYA  E   EA + F Q+R   LQV+     +++   A       G+ +H Y  +   
Sbjct: 282 IGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQF 341

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
                +  ++++MY K G ++ + ++F ++  K +V+W  +I  Y    +  EA+ LF +
Sbjct: 342 LPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLE 401

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC------NDKRMKPRIEHYSCIVD 462
           +L   + PD      V+ A    G +   ++  S +       N   M   +  Y+    
Sbjct: 402 LLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYA---- 457

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              R+G +  ++ + + M  K  I+ W T++    +HG
Sbjct: 458 ---RSGDVVASREIFDKMVSKDVIS-WNTMIMGYAIHG 491


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/620 (35%), Positives = 346/620 (55%), Gaps = 32/620 (5%)

Query: 98  LSLFCQMGSSSVKPNEF--TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
           +SLF +M +S+   +    +L   +K+   L     G  +H + ++SG   +    N+++
Sbjct: 33  VSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALL 92

Query: 156 DMYSK--CGRINEAA-----------------RMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           ++Y K  C  ++                    ++FD M  + +++WN ++ G    G   
Sbjct: 93  NLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHH 152

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L   RKM   G  PD FT ++ L        V  G ++HGF   +GF   V   +  S
Sbjct: 153 EALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDV--FVGSS 210

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y  C     + +VFD +  +  I W+SL+ G AQ  ++ EA+ +FR++ +  ++  
Sbjct: 211 LIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATEL 374
               SS++ V  + A +  GKQ+HAY   +  G + +V  S+S++DMY KCG I  A  +
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYV--ICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F++M   +VV+WT +I GY  HG A+EA+ LF +M L + +P+ + +LAVL+ACSH+GLV
Sbjct: 329 FDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLV 388

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++  +YF  + N   + P +EH++ + D+LGRAG LDEA N I  M +KP+ ++W TLL 
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLR 448

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVH +  L  EV + ++ L+  +  ++V++SN+++ +G WNE   LR+  R KG+KK 
Sbjct: 449 ACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD 508

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES 614
              SW+EV  ++H F   D +HP  ++I   L    ++M  E G V   +    DI+EE 
Sbjct: 509 PACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMARE-GHVPNTEDVFQDIEEEH 567

Query: 615 KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVV 674
           K   L  HSEKLAI    V G ++   G  IRV KNLRVC DCH   K +SK+     VV
Sbjct: 568 KSYVLCGHSEKLAI----VFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVV 623

Query: 675 RDATRFHRFEGGVCSCGDYW 694
           RDA RFH F+ G CSCGD+W
Sbjct: 624 RDANRFHHFKDGNCSCGDFW 643



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 220/436 (50%), Gaps = 31/436 (7%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK--CGEMNGACA---- 68
           L  +L+ C+   L   G  LH   ++ G   D    N L+++Y K  C  ++        
Sbjct: 53  LPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVD 112

Query: 69  -------------VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
                        VFD+M+ER+VVSW  L+ G  + G     L    +M     +P+ FT
Sbjct: 113 VPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFT 172

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           LST +      + V+ G+++HG   ++GF+ +  VG+S+IDMY+ C R + + ++FD +P
Sbjct: 173 LSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLP 232

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            +  I WN+++AG    G  ++ L +FR+M + G  P   TF+S +  CG+L S+  G Q
Sbjct: 233 VRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQ 292

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H ++I  GF  +V   I+ SL+D Y KCG +  A  +FD +    V+SW+++I+GYA  
Sbjct: 293 LHAYVICGGFEDNV--FISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLD 351
               EA+ LF ++   + + +     +++   +   LV++G    K +  +   VP+   
Sbjct: 351 GPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH 410

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKML 410
            +   ++ D   + G +DEA    ++M +K   + W+ ++     H     A  + +K++
Sbjct: 411 FA---ALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIM 467

Query: 411 LDDVEPDGVAYLAVLS 426
             ++EP  +    VLS
Sbjct: 468 --ELEPRSIGSHVVLS 481



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+++HG   + GF  D+ + + LIDMYA C   + +  VFD +  R+ + W +L+ G  Q
Sbjct: 189 GLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQ 248

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG+ +  L +F +M  + V+P   T S+ I   G L+S+  G Q+H   +  GFE N  +
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFI 308

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S+IDMY KCG I+ A  +FD M +  +++W AMI GY L G + + L+LF +M+    
Sbjct: 309 SSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA 368

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLV 268
            P+  TF + L AC   G V  G +   +  +    Y +   +    +L D   + G L 
Sbjct: 369 KPNHITFLAVLTACSHAGLVDKGWK---YFKSMSNHYGIVPTLEHFAALADTLGRAGELD 425

Query: 269 EARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQVDG--FVLSSM 323
           EA      ++ K   S WS+L+      +N   A E+ +++ E   +  G   VLS+M
Sbjct: 426 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNM 483


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/553 (35%), Positives = 339/553 (61%), Gaps = 8/553 (1%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG-EMNGACAVFDKML 74
           A  L+ C+K L  ++G+Q+H  ++K G  FD  + N L+ +Y K G +      VFD + 
Sbjct: 122 ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF 181

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++V+SWT+++ G+++ G     L LF +M +  V+PN FTLS  IKA   L  ++ G  
Sbjct: 182 VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRI 241

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG+ +  GF+ N V+ +++IDM+ +   +++A ++FD +     I W ++I+      +
Sbjct: 242 FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 301

Query: 195 SDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            D+ L  F  MQ +HG  PD FTF + L ACG+LG +  G ++H  +IT+GF  +V  V+
Sbjct: 302 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV--VV 359

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLVD Y KCG + E++R+FD +  K+ +SWS+L+ GY Q  +    +++FR++     
Sbjct: 360 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME---- 415

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           +VD +   +++   A  A V QGK++H    +     D  V +++VD+Y KCG I+ A  
Sbjct: 416 KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQT 475

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F++MPV+N++TW  +I G+ ++G  +EA+ +F +M+ + ++PD ++++ +L ACSH GL
Sbjct: 476 IFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGL 535

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           V+E +EYF  +  D  +K  IEHYSC+VD LGRAG L+EA+ LIE+   +   ++W  LL
Sbjct: 536 VDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 595

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            AC    + E+   + + ++ L+ D  ++YV+++N++   G WN+  R+R+L + +G+ K
Sbjct: 596 GACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK 655

Query: 554 VAGRSWVEVDKEI 566
           + G+SW+E    +
Sbjct: 656 MPGKSWIETKNNL 668



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 210/400 (52%), Gaps = 15/400 (3%)

Query: 108 SVKPNEFTLSTNIKASGVLS-----SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           S+ P E +    + AS + +     +  +G+QIH   +KSG E++  VGNS++ +Y K G
Sbjct: 108 SIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG 167

Query: 163 R-INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
               E  ++FD +  K +I+W +MI+GYV  G     L LF KM  +G  P+ FT ++ +
Sbjct: 168 TDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVI 227

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           KAC  LG +  G   HG ++  GF      VIA +L+D + +   L +AR++FD + +  
Sbjct: 228 KACSELGDLKLGRIFHGVVLGRGF--DSNYVIASALIDMHGRNCALDDARQLFDELLEPD 285

Query: 282 VISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            I W+S+I    + +   EA+  F  + R+  +  DGF   +++    +   ++QGK++H
Sbjct: 286 AICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVH 345

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           A         +  V +S+VDMY KCG + E+  +F+ MP+KN V+W+ ++ GY ++G  K
Sbjct: 346 AKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFK 405

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
             + +FRKM     + D   +  +L  C+    V + +E   +       +  I   S +
Sbjct: 406 SVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SAL 460

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           VD   + G ++ A+ + + MPV+ ++  W +++     +G
Sbjct: 461 VDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNG 499



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 195/360 (54%), Gaps = 10/360 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  ++ CS+   L  G   HG ++  GF  + ++ + LIDM+ +   ++ A  +FD++L
Sbjct: 223 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 282

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGM 133
           E + + WT+++    +N      L  F  M     + P+ FT  T + A G L  ++ G 
Sbjct: 283 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 342

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   + +GF  N VV +S++DMY KCG + E+ R+FD MP K+ ++W+A++ GY   G
Sbjct: 343 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 402

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                + +FRKM++     D + F + L+ C  L +V  G ++H   I  G    V  ++
Sbjct: 403 DFKSVIQIFRKMEK----VDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV--IV 456

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KCGC+  A+ +FD +  +++I+W+S+I G+AQ     EA+ +F Q+ +  +
Sbjct: 457 ESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 516

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
           + D      ++   +   LV++G++      K   G+   + +   +VD+  + GL++EA
Sbjct: 517 KPDYISFIGILFACSHRGLVDEGREYFISMTK-DYGIKVGIEHYSCMVDLLGRAGLLEEA 575



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 3/210 (1%)

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           S IL   +   L+ A++L + +    +     + +S++           G QIHA+  K 
Sbjct: 88  SKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKS 147

Query: 347 PSGLDTSVSNSIVDMYLKCGL-IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               D  V NS++ +Y K G    E  ++F+ + VK+V++WT +I+GY + G    ++ L
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F KML   VEP+     AV+ ACS  G ++  +  F  +   +         S ++D  G
Sbjct: 208 FWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR-IFHGVVLGRGFDSNYVIASALIDMHG 266

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           R   LD+A+ L + + ++P    W +++SA
Sbjct: 267 RNCALDDARQLFDEL-LEPDAICWTSIISA 295


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/571 (36%), Positives = 327/571 (57%), Gaps = 4/571 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +D G QLHG ++K G+   L+  N LI MY + G++  A  VF  +  ++++SW +++ G
Sbjct: 274 IDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITG 333

Query: 88  FLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           F Q G     L LF  M      +PNEF   +   A   L   E G QIHGMC K G   
Sbjct: 334 FTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGR 393

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N   G S+ DMY+K G +  A R F  + +  L++WNA+IA +  +G  ++ +  F +M 
Sbjct: 394 NVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMM 453

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G +PD  TF S L ACGS  ++  GTQIH ++I  G     +  +  SL+  Y KC  
Sbjct: 454 HTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGL--DKEAAVCNSLLTMYTKCSN 511

Query: 267 LVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           L +A  VF D+ E  +++SW++++    Q +   E   LF+ +     + D   +++++G
Sbjct: 512 LHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILG 571

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A+ A +E G Q+H ++ K    +D SVSN ++DMY KCG +  A ++F      ++V+
Sbjct: 572 TCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVS 631

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+ +I GY + GL  EA+ LFR M    V+P+ V YL VLSACSH GLVEE   +++ + 
Sbjct: 632 WSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTME 691

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            +  + P  EH SC+VD L RAG L EA+N I+ M   P I +W+TLL++C+ HG++++ 
Sbjct: 692 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIA 751

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               E +L+LD  N    V++SNIHA  G+W E  RLR L +  G++KV G+SW+ V  +
Sbjct: 752 ERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQ 811

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           IH F+  D++H     I+ +L ++  +M ++
Sbjct: 812 IHVFFSEDNSHQQRGDIYTMLEDLWLQMLDD 842



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/495 (31%), Positives = 248/495 (50%), Gaps = 18/495 (3%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  E     + +  C+    L YG ++H  ++K     DL+L N +++MY KCG +  A
Sbjct: 152 SIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDA 211

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              FD M  RNVVSWT ++ G+ QNG     + ++ QM  S   P+  T  + IKA  + 
Sbjct: 212 RKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIA 271

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             ++ G Q+HG  +KSG++ + +  N++I MY++ G+I  A+ +F ++  K LI+W +MI
Sbjct: 272 GDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMI 331

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            G+   GY  + L LFR M   G   P+EF F S   AC SL     G QIHG     G 
Sbjct: 332 TGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGL 391

Query: 246 PYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               + V AG SL D Y K G L  A R F  IE   ++SW+++I  ++   ++ EA+  
Sbjct: 392 G---RNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYF 448

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F Q+    L  DG    S++        + QG QIH+Y  K+    + +V NS++ MY K
Sbjct: 449 FCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTK 508

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           C  + +A  +F ++    N+V+W  I++   +H  A E   LF+ ML  + +PD +    
Sbjct: 509 CSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITT 568

Query: 424 VLSACSHSGLVEESQEYF-----SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           +L  C+    +E   +       S L  D  +  R      ++D   + G L  A+++  
Sbjct: 569 ILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNR------LIDMYAKCGSLKHARDVFG 622

Query: 479 SMPVKPSIAIWQTLL 493
           S    P I  W +L+
Sbjct: 623 STQ-NPDIVSWSSLI 636



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 232/472 (49%), Gaps = 24/472 (5%)

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
           C +     E +  S+  LMC   Q    +A  +      +SS++    T    I A   +
Sbjct: 113 CLIKQHSRELSTNSYINLMCK--QRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSI 170

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            S++ G +IH   +KS  + + V+ N I++MY KCG + +A + FD M  +++++W  MI
Sbjct: 171 RSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMI 230

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY   G  +  ++++ +M + G  PD  TF S +KAC   G +  G Q+HG +I SG+ 
Sbjct: 231 SGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYD 290

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           + +  +   +L+  Y + G +V A  VF +I  K +ISW+S+I G+ Q     EA+ LFR
Sbjct: 291 HHL--IAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFR 348

Query: 307 QL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            + R+   Q + F+  S+          E G+QIH   AK   G +     S+ DMY K 
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKF 408

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +  A   F ++   ++V+W  II  +   G   EA+  F +M+   + PDG+ +L++L
Sbjct: 409 GFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLL 468

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMP 481
            AC     + +  +  S +     +K  ++  + + +SL     +   L +A N+ + + 
Sbjct: 469 CACGSPVTINQGTQIHSYI-----IKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVS 523

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEIL----LRLDGDNPVNYVMMSNI 529
              ++  W  +LSAC  H      ++ GE+     L L  +N  + + ++ I
Sbjct: 524 ENANLVSWNAILSACLQH------KQAGEVFRLFKLMLFSENKPDNITITTI 569



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 2/180 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L+ G Q+H   VK G   D+ ++N LIDMYAKCG +  A  VF      ++
Sbjct: 570 LGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDI 629

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG- 137
           VSW++L+ G+ Q G     L+LF  M +  V+PNE T    + A   +  VE G   +  
Sbjct: 630 VSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNT 689

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLAGYSD 196
           M ++ G        + ++D+ ++ G + EA      M     IT W  ++A     G  D
Sbjct: 690 MEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVD 749


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/586 (35%), Positives = 334/586 (56%), Gaps = 3/586 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+    L  GVQLH   VK G   ++ + N L+ MYAKC  ++ A  +F+ + 
Sbjct: 245 LACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLP 304

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++V+W  ++ G +QNG     L LFC M  S  +P+  TL + + A   L+ ++ G +
Sbjct: 305 RDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKE 364

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +++    +  + ++++D+Y KC  +  A  ++D   A  ++  + +I+GYVL G 
Sbjct: 365 VHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGM 424

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S+K L +FR + E    P+  T  S L AC S+ ++  G +IHG+++ +   Y  K  + 
Sbjct: 425 SEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNA--YEGKCYVE 482

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG L  +  +F  +  K  ++W+S+I  ++Q     EA++LFRQ+    ++
Sbjct: 483 SALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIK 542

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   +SS +   A    +  GK+IH    K P   D    ++++DMY KCG ++ A  +
Sbjct: 543 YNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRV 602

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  MP KN V+W  II+ YG HGL KE+V    +M  +  +PD V +LA++SAC+H+GLV
Sbjct: 603 FEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLV 662

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE  + F  +  +  + PR+EH++C+VD   R+GRLD+A   I  MP KP   IW  LL 
Sbjct: 663 EEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLH 722

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVH ++EL     + L +LD  N   YV+MSNI+A AG W+   ++R+L +   + K+
Sbjct: 723 ACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            G SWV+V+   H F   D +HP +E I+  L  + + ++EE G+V
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREE-GYV 827



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 268/517 (51%), Gaps = 9/517 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    +  G  +H      G + D+ + + LI MY+  G +  A   FD M  R+ 
Sbjct: 148 VKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDC 207

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  +M G+++ G+    + LF  M  S  +PN  TL+  +      + + +G+Q+H +
Sbjct: 208 VLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSL 267

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    V N+++ MY+KC  +++A R+F+++P   L+TWN MI+G V  G  D+ 
Sbjct: 268 AVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEA 327

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  M   G  PD  T  S L A   L  +  G ++HG++I +     +   +  +LV
Sbjct: 328 LGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCV--HMDAFLVSALV 385

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  AR ++D      V+  S++I GY       +A+++FR L E+ ++ +  
Sbjct: 386 DIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  + +  G++IH Y  +        V ++++DMY KCG +D +  +F++M
Sbjct: 446 TVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKM 505

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
            +K+ VTW  +I+ + ++G  +EA+ LFR+M ++ ++ + V   + LSAC+    +   +
Sbjct: 506 SLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGK 565

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E    +     +K  I   S ++D   + G ++ A  + E MP K  ++ W +++SA   
Sbjct: 566 EIHGVIIKGP-IKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGA 623

Query: 499 HGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADA 533
           HG   L +E    L R+  +G  P +   ++ I A A
Sbjct: 624 HG---LVKESVSFLHRMQEEGYKPDHVTFLALISACA 657



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 249/513 (48%), Gaps = 18/513 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFD---LMLNNDLIDMYAKCGEMNG 65
           VS   RL   LR C     L  G+Q+H   V  G   +   L L+  L+ MY        
Sbjct: 29  VSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRD 88

Query: 66  ACAVFDKMLER---NVVSWTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNI 120
           A AVF  +      + + W  L+ GF   G+    +  + +M +  ++  P+  TL   +
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVV 148

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           K+   L +V  G  +H     +G   +  VG+++I MYS  G + +A   FD MP +  +
Sbjct: 149 KSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCV 208

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WN M+ GY+ AG     + LFR M+  G  P+  T    L  C +   +  G Q+H   
Sbjct: 209 LWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLA 268

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +  G    V   +A +L+  Y KC CL +A R+F+L+ +  +++W+ +I G  Q   L E
Sbjct: 269 VKCGLEQEV--AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ LF  +     + D   L S++    D   ++QGK++H Y  +    +D  + +++VD
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVD 386

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           +Y KC  +  A  L++     +VV  + +I+GY  +G++++A+ +FR +L   ++P+ V 
Sbjct: 387 IYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVT 446

Query: 421 YLAVLSACSHSGLVEESQEYFSR-LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
             +VL AC+    +   QE     L N    K  +E  S ++D   + GRLD +  +   
Sbjct: 447 VASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDLSHYIFSK 504

Query: 480 MPVKPSIAIWQTLLSACRVHGD----LELGREV 508
           M +K  +  W +++S+   +G+    L+L R++
Sbjct: 505 MSLKDEVT-WNSMISSFSQNGEPQEALDLFRQM 536


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/567 (37%), Positives = 324/567 (57%), Gaps = 13/567 (2%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI----TWNAMIAGY 189
           QIH   +K G   NP+V      + S     + AA       A + +     +N +I  Y
Sbjct: 47  QIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAY 106

Query: 190 VLAGYS-DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
              G+S DK L L+  M     +P++FT+   LKAC  L  +  G  +HG ++  GF   
Sbjct: 107 AQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCD 166

Query: 249 VKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           +   +  ++V  Y  C G +  AR+VFD + +   ++WS++I GYA+     EA+ LFR+
Sbjct: 167 IH--VQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFRE 224

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           ++   +  D   + SM+    D   +E GK I AY  +        VSN+++DM+ KCG 
Sbjct: 225 MQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGD 284

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           I +A +LF  M  K +V+WT +I G   HG  +EA  LF +M    V PD VA++ +LSA
Sbjct: 285 ISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSA 344

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSHSGLVE  +EYF  +    ++ P+IEHY C+VD   R G + EA   + +MP++P+  
Sbjct: 345 CSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPV 404

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           I +TL+SACR HG+ +LG ++ ++L++ +  +  NYV++SNI+A   SW +  ++R++  
Sbjct: 405 ILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVME 464

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            KG+KKV G + +E+D EI+ F  GD +H   ++I++++ EM + MK+  G+       L
Sbjct: 465 VKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKS-GYRPSTSEVL 523

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            DI EE KE+SL  HSEKLAI   L+R      PG  IR+ KNLRVC DCH   K +SKI
Sbjct: 524 LDINEEDKEDSLNRHSEKLAIAFGLLR----TPPGTPIRIVKNLRVCSDCHSASKFISKI 579

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                ++RD  RFH F+ G CSCGD+W
Sbjct: 580 YDREIIMRDRNRFHHFKSGQCSCGDFW 606



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 202/416 (48%), Gaps = 36/416 (8%)

Query: 81  WTALMCGFLQNGNAK-ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           +  L+  + Q G++K   L+L+  M   ++ PN+FT    +KA   L  +  G  +HG  
Sbjct: 99  FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158

Query: 140 MKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
           +K GF+ +  V N+++ MYS C G IN A ++FD MP    +TW+AMI GY   G S + 
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LFR+MQ     PDE T  S L AC  LG++  G  I  ++        V+  ++ +L+
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVE--VSNALI 276

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D + KCG + +A ++F  + +K+++SW+S+I+G A      EA  LF ++    +  D  
Sbjct: 277 DMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDV 336

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
               ++   +   LVE+G++      K    VP          +VDMY + GL+ EA E 
Sbjct: 337 AFIGLLSACSHSGLVERGREYFGSMMKKYKLVPK---IEHYGCMVDMYCRTGLVKEALEF 393

Query: 375 FNEMPVK-NVVTWTVIIT---GYGKHGLAKEAVGLFRK---------MLLDDVEPDGVAY 421
              MP++ N V    +++   G+G+  L ++   L  K         +LL ++    +++
Sbjct: 394 VRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSW 453

Query: 422 -----------LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
                      +  +     S ++E   E +  +  DK  K   E Y  +VD +GR
Sbjct: 454 EKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYE-MVDEMGR 508



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 137/253 (54%), Gaps = 2/253 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERN 77
           L+ C+   +L+ G  +HG++VK GF  D+ + N ++ MY+ C G +N A  VFD+M + +
Sbjct: 139 LKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSD 198

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+A++ G+ + G +   ++LF +M  + V P+E T+ + + A   L ++E G  I  
Sbjct: 199 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEA 258

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              +        V N++IDM++KCG I++A ++F  M  K++++W ++I G  + G   +
Sbjct: 259 YIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQE 318

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
              LF +M   G  PD+  F   L AC   G V  G +  G ++   +    K    G +
Sbjct: 319 ATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKK-YKLVPKIEHYGCM 377

Query: 258 VDFYVKCGCLVEA 270
           VD Y + G + EA
Sbjct: 378 VDMYCRTGLVKEA 390



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 3/159 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L+ G  +   + +      + ++N LIDM+AKCG+++ A  +F  M E+ +
Sbjct: 241 LSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G   +G  +    LF +M SS V P++      + A      VE G +  G 
Sbjct: 301 VSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGS 360

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
            MK  ++  P + +   ++DMY + G + EA      MP
Sbjct: 361 MMKK-YKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMP 398


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 222/653 (33%), Positives = 363/653 (55%), Gaps = 57/653 (8%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL-QNGNAKACLSLFC 102
           S +++ +N +I  + + G++N A  VF+ M  +  V+W +++ G+  + G  K    LF 
Sbjct: 2   SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           ++    +      L+  +  + V S+    +    M +K    WN     ++I  +S+ G
Sbjct: 62  RIPEPDIFSYNIMLACYLHNADVESA---RLFFDQMPVKDTASWN-----TMISGFSQNG 113

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            +++A  +F VMP ++ ++WNAMI+GYV +G  D    LF                    
Sbjct: 114 MMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVA----------------- 156

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKS 281
                                     V++V+A  +++  ++K G +  A + F+ +  K+
Sbjct: 157 -------------------------PVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKN 191

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +++W+++I GY +       ++LF+++ E   + +   LSS++   ++ + ++ GKQ+H 
Sbjct: 192 LVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQ 251

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
              K P   + +   S++ MY KCG +++A +LF  MP K+VVTW  +I+GY +HG  ++
Sbjct: 252 LICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEK 311

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF KM  + ++PD + ++AVLSAC+H+G V+   EYF+ +  D  ++ + +HY+C+V
Sbjct: 312 ALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVV 371

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D LGR G+L EA +LI+ MP KP  AI+ TLL ACR+H +LEL     + LL LD ++  
Sbjct: 372 DLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAA 431

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            YV ++N++A    W+    +R+  +   + K  G SW+EV   +H F  GD  HP    
Sbjct: 432 GYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAF 491

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           IH+ L E+E++M+   G+V  ++YALHD+ EE K++ L  HSEKLAI   L+R  L    
Sbjct: 492 IHEKLNELERKMRLA-GYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPL---- 546

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G  IRVFKNLRVCGDCH   K +S I   V +VRD TRFH F  G CSCGDYW
Sbjct: 547 GTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 1/164 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L  G Q+H  + K   S+++     L+ MY KCG++  A  +F  M 
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +++VV+W A++ G+ Q+G  +  L LF +M    +KP+  T    + A      V+ G++
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIE 349

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
             + M    G E  P     ++D+  + G++ EA  +   MP K
Sbjct: 350 YFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/665 (33%), Positives = 342/665 (51%), Gaps = 92/665 (13%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           S  P+   L T  K+   L        +H +   SG   +P V +S++  Y + G    A
Sbjct: 15  SFPPDPHLLPTAFKSCPTLPLAR---ALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNA 71

Query: 168 ARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-------------- 211
             +FD MP   ++++ W+A++A +   G ++    L  +M+  G +              
Sbjct: 72  RALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGL 131

Query: 212 -----------------------PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
                                  PD    +  L A G +G V  G Q+HG+ + +G    
Sbjct: 132 NRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRAD 191

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFD------------LIE------------------ 278
              V A  L+D Y KCG   E  RVFD            LI                   
Sbjct: 192 ACVVTA--LIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEF 249

Query: 279 -----QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
                + +V+SW+S++    Q     EA+E FR+++ +  + +   +  ++  FA+ A +
Sbjct: 250 VDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAAL 309

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
             G+  H +A +     D  VS+++VDMY KCG + +A  +F+ M  +NVV+W  +I GY
Sbjct: 310 MHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGY 369

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
             +G A  AV +F  ML    +PD V +  +L+AC+ +GL EE + YF  + N+  + PR
Sbjct: 370 AMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPR 429

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY+C+V  LGRAG+LDEA +LI  MP +P   IW +LL +CRVHG+++L     E L 
Sbjct: 430 MEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLF 489

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            L+ +N  NYV++SNI+A    W+   R+R++ +  GLKK  G SW+E+  ++H    GD
Sbjct: 490 HLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGD 549

Query: 574 DTHPL----TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
           D+HP+     EKI+Q+ ++M K     LGFV    + LHD++E+ K++ L VHSEKLA+ 
Sbjct: 550 DSHPMMTAIIEKINQLNIQMRK-----LGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVA 604

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           L L+    +  PG  +RV KNLR+CGDCHE +K +S        VRD  RFH F GG CS
Sbjct: 605 LGLI----STSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCS 660

Query: 690 CGDYW 694
           CGD+W
Sbjct: 661 CGDFW 665



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 53/420 (12%)

Query: 53  LIDMYAKCGEMNGACAVFDKM-----LERNVVSWTALMCGFLQNGNAK-ACLSLFCQMGS 106
           L+  +A  G+  GA  + ++M     +E NV++W  L+ G  ++G A+ A ++L    G 
Sbjct: 91  LVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGE 150

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
             ++P+   +S  + A G +  V  G Q+HG  +K+G   +  V  ++IDMY KCG+  E
Sbjct: 151 GLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAE 210

Query: 167 AARMFDVMPAKSLITWNAMIAGY-----------VLAGYSDKGLLL-------------- 201
             R+FD      + + NA+IAG            +   + D+G+ L              
Sbjct: 211 VVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQ 270

Query: 202 ----------FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                     FR+MQ  G  P+  T    L A  ++ ++  G   H F +  GF + V  
Sbjct: 271 NGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV-- 328

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            ++ +LVD Y KCG + +AR +FD +  ++V+SW+++I GYA       A+ +F  + + 
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 312 SLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
             + D    + ++       L E+G    K++H      P     +    +V +  + G 
Sbjct: 389 KQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYAC---MVTLLGRAGK 445

Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +DEA +L ++MP + +   W  ++     HG    A     K+    +EP+      +LS
Sbjct: 446 LDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLF--HLEPENAGNYVLLS 503



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 35/237 (14%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--------------- 71
           L+  G QLHG  VK G   D  +   LIDMY KCG+      VFD               
Sbjct: 172 LVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIA 231

Query: 72  --------------------KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
                               + +E NVVSWT+++   +QNG     +  F +M +   +P
Sbjct: 232 GLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEP 291

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           N  T+   + A   ++++ +G   H   ++ GF  +  V ++++DMY+KCGR+ +A  +F
Sbjct: 292 NSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIF 351

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           D M ++++++WNAMI GY + G +   + +F  M +  + PD  TFT  L AC   G
Sbjct: 352 DTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAG 408



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 4/172 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L +G   H   ++ GF  D+ +++ L+DMYAKCG +  A  +FD M+ RNVVSW A++ G
Sbjct: 309 LMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGG 368

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +   G A   + +F  M     KP+  T +  + A       E G       M + +  +
Sbjct: 369 YAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKE-MHNEYGVS 427

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSD 196
           P + +   ++ +  + G+++EA  +   MP       W +++    + G  D
Sbjct: 428 PRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVD 479



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 6/182 (3%)

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           +  +  L   LR  S   D  +L +    F     +   + +HA A       D  V++S
Sbjct: 1   MPHSSSLHHFLRHVSFPPDPHLLPT---AFKSCPTLPLARALHAVAEVSGLARDPFVASS 57

Query: 358 IVDMYLKCGLIDEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DV 414
           ++  YL+ G    A  LF+ M  P + VV W+ ++  +   G A+ A  L  +M  D  V
Sbjct: 58  LLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGV 117

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           EP+ + +  ++S  + SG   ++    + +  +  ++P     SC + ++G  G +   +
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQ 177

Query: 475 NL 476
            L
Sbjct: 178 QL 179


>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 744

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/694 (34%), Positives = 370/694 (53%), Gaps = 33/694 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSF--DLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
            + C+    L  G+ LH  ++   + +  +++L N LI MYAKCG +  A  VFD M ER
Sbjct: 66  FQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILYARQVFDTMPER 125

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVSWTAL+ G+ Q GN +    LF  M +    PNEF LS+ +     L   E G Q+H
Sbjct: 126 NVVSWTALITGYAQAGNEQDGFCLFSSMLAHCC-PNEFALSSVL----TLCRYEPGKQVH 180

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           G+ +K G   +  V N++I MY +C       EA  +F+ M  K+L+TWN+MIA +    
Sbjct: 181 GLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTWNSMIAAFQCCN 240

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---------GTQIHGFLITSG 244
              + + +F +M   G     F   + L  C +L                Q+H   + SG
Sbjct: 241 LGKQAIGVFMRMHSDGV---GFDRATVLNICTTLYKSSDLDPDQVSKCCLQLHSLTVKSG 297

Query: 245 FPYSVKTVIAGSLVDFYVKC-GCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAM 302
                +T +A +LV  Y +  G   +  ++F ++   + +++W+ +I  +A  +    A+
Sbjct: 298 L--VTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIVAWTGIITAFAVYDP-ERAI 354

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            LF QLR   L  D +  SS++   A          IHA   K     DT V+NS++  Y
Sbjct: 355 LLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFATDTVVNNSLIHAY 414

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            KCG +D    +F++M  ++VV+W  ++  Y  HG     + +F+KM   D++PD   ++
Sbjct: 415 AKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSILPVFQKM---DIKPDSATFI 471

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           A+LSACSH+G V+E    F  +       P++ HY+C++D LGRA R  EA+ +I+ MP+
Sbjct: 472 ALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDMLGRAERFAEAEEVIKQMPM 531

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
            P   +W TLL +CR HG+ +LG+   + L  ++  N ++Y+ MSNI+    S+NE  + 
Sbjct: 532 GPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSYIQMSNIYNAESSFNEGNKS 591

Query: 543 RKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYG 602
            K   +  ++K  G S  E+  ++H F  G    P  E I + L  +  R+K E+G+V  
Sbjct: 592 IKEMETWRVRKEPGLSCTEIGNKVHEFTSGGRCRPDREAICRELERLISRLK-EMGYVPE 650

Query: 603 VKYALHDIQE-ESKEESLRVHSEKLAIGLALVRGGLNEQPG-KVIRVFKNLRVCGDCHEF 660
           ++ AL  I+E E KEE L  HSEKLA+  A++ G  +   G  +I++ KN+R+C DCH F
Sbjct: 651 MRSALQQIEEDEQKEEHLSHHSEKLALAFAVMEGRKSGDCGVNLIQIMKNIRICIDCHNF 710

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +K  SK+L    ++RD+ RFH F+   CSC DYW
Sbjct: 711 MKLASKLLGKEILLRDSNRFHHFKDSSCSCNDYW 744



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 8/232 (3%)

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E+  +  + +  +AC    ++  G  +H  +++  + YS   ++A  L+  Y KCG ++ 
Sbjct: 55  ELQSQHAYAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYLITMYAKCGNILY 114

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VFD + +++V+SW++LI GYAQ  N  +   LF  +       + F LSS++ +   
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCCP-NEFALSSVLTL--- 170

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELFNEMPVKNVVTW 386
               E GKQ+H  A K+       V+N+++ MY +C       EA  +F  M  KN+VTW
Sbjct: 171 -CRYEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWTVFEAMEFKNLVTW 229

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             +I  +    L K+A+G+F +M  D V  D    L + +    S  ++  Q
Sbjct: 230 NSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSDLDPDQ 281


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 233/691 (33%), Positives = 376/691 (54%), Gaps = 52/691 (7%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEM-NGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +H  + K GF  D+++   +++ Y K   M + A   F+ M  RN  +W+ ++    Q G
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM-QIHGMCMKSGFEWNPVVG 151
                 +++ +    SV P+  ++ T +   G +   +    QIH        E N V  
Sbjct: 305 RIDDAFAVYQRDPLKSV-PSRTSMLTGLARYGRIDDAKILFDQIH--------EPNVVSW 355

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N++I  Y +   ++EA  +F+ MP ++ I+W  MIAGY   G S++ L+  + +   G +
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGML 415

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY------------------------ 247
           P   + TS+  AC ++ ++  G Q+H   + +G  +                        
Sbjct: 416 PSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQI 475

Query: 248 ----SVK-TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
               +VK TV   S +   V+     EAR VF+ +    V+SW+++I   AQ +   EA+
Sbjct: 476 FDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAV 535

Query: 303 ELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIV 359
           E+FR  L ER L  +  +L+ ++G+  +    + G+QIH  A K+  G+D+   V+N++V
Sbjct: 536 EIFRSMLHERELP-NPPILTILLGLSGNLGAPQLGQQIHTIAIKL--GMDSGLVVANALV 592

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
            MY KC   D + ++F+ M  +++ TW  IITGY +HGL +EA+ +++ M+   V P+ V
Sbjct: 593 SMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            ++ +L ACSHSGLV+E  ++F  + +D  + P +EHY+C+VD LGRAG +  A++ I  
Sbjct: 652 TFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYD 711

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP++P   IW  LL AC++H ++E+GR   E L  ++  N  NYVM+SNI++  G W+E 
Sbjct: 712 MPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEV 771

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            ++RKL + +G+ K  G SW+++  ++H F  GD+ H   + I+  L E+   +K   G+
Sbjct: 772 AKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKAT-GY 830

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V    + LHDI EE KE SL  HSEKLA+   L    L    G  I++ KNLR+CGDCH 
Sbjct: 831 VPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGL----LVTPKGMPIQIMKNLRICGDCHT 886

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
           FIK +S + K    VRD  RFH F  G CSC
Sbjct: 887 FIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 224/515 (43%), Gaps = 82/515 (15%)

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           + G ++ A  VFD M  R++++W +++  +  NG   A  SL   +   +++     LS 
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG--------------------------N 152
             +A  V  +        GM +++   WN +V                           N
Sbjct: 105 YARAGRVRDARR---VFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWN 161

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++  Y     + EA  +F+ MP ++ ++W  MI+GYVL     +   +FR M   G  P
Sbjct: 162 TMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTP 221

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK-CGCLVEAR 271
           ++    S L A   LG  G    IH  +  +GF   V  V+  ++++ Y K    L  A 
Sbjct: 222 EQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDV--VVGTAILNGYTKDVNMLDSAV 279

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           + F+ +  ++  +WS++I   +Q   + +A  ++++   +S+       +SM+   A + 
Sbjct: 280 KFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSR----TSMLTGLARYG 335

Query: 332 LVEQGK----QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
            ++  K    QIH      P+ +     N+++  Y++  ++DEA +LFN MP +N ++W 
Sbjct: 336 RIDDAKILFDQIHE-----PNVVSW---NAMITGYMQNEMVDEAEDLFNRMPFRNTISWA 387

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEE 436
            +I GY ++G +++A+   + +    + P   +  +   ACS           HS  V+ 
Sbjct: 388 GMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKA 447

Query: 437 SQEYFSRLCN-------------------DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
             ++ S +CN                   D+        Y+  + +L +    DEA+++ 
Sbjct: 448 GCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVF 507

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +MP  P +  W T++SAC      + G E  EI 
Sbjct: 508 NNMP-SPDVVSWTTIISAC---AQADQGNEAVEIF 538



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 197/415 (47%), Gaps = 29/415 (6%)

Query: 44  SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL---QNGNAKACLSL 100
           S D+   N ++  Y     M  A  +F++M ERN VSWT ++ G++   Q+G A      
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRT 213

Query: 101 FCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
               G +  +PN  ++ + ++  G    +E+   IH +  K+GFE + VVG +I++ Y+K
Sbjct: 214 MLCEGMTPEQPNLVSVLSAVRHLGKPGILES---IHVLVHKTGFERDVVVGTAILNGYTK 270

Query: 161 -CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
               ++ A + F+ M A++  TW+ +IA    AG  D    ++++      +P     TS
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR-DPLKSVPSR---TS 326

Query: 220 TLKACGSLGSVGGGT----QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
            L      G +        QIH              V   +++  Y++   + EA  +F+
Sbjct: 327 MLTGLARYGRIDDAKILFDQIH----------EPNVVSWNAMITGYMQNEMVDEAEDLFN 376

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  ++ ISW+ +I GYA+     +A+   + L  + +      L+S     ++   +E 
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           GKQ+H+ A K     ++ V N+++ +Y K   I    ++F+ M VK+ V++   ++   +
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQ 496

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + L  EA  +F  M      PD V++  ++SAC+ +    E+ E F  + +++ +
Sbjct: 497 NNLFDEARDVFNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 134/304 (44%), Gaps = 40/304 (13%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
            CS    L+ G Q+H   VK G  F+  + N LI +Y K   +     +FD+M  ++ VS
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVK------------------------------ 110
           + + M   +QN        +F  M S  V                               
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546

Query: 111 -PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
            PN   L+  +  SG L + + G QIH + +K G +   VV N+++ MY KC    ++ +
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DSLK 605

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD M  + + TWN +I GY   G   + + +++ M   G +P+E TF   L AC   G 
Sbjct: 606 VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL 665

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARR-VFDL-IEQKSVISW 285
           V  G   H F  +    Y +  ++     +VD   + G +  A   ++D+ IE  SVI W
Sbjct: 666 VDEG---HQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVI-W 721

Query: 286 SSLI 289
           S+L+
Sbjct: 722 SALL 725



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 82/181 (45%), Gaps = 13/181 (7%)

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           VP    TS  ++ +    + G + EA E+F+ MP ++++ W  +I  Y  +G+      L
Sbjct: 27  VPRSPGTSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL 86

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
              +   ++    +    +LS  + +G V +++  F  +     +      ++ +V    
Sbjct: 87  ADAISGGNLRTGTI----LLSGYARAGRVRDARRVFDGMGVRNTVA-----WNAMVTCYV 137

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           + G +  A+ L ++MP +  ++ W T+L+    +   +L  E   +  R+   N V++ +
Sbjct: 138 QNGDITLARKLFDAMPSR-DVSSWNTMLTG---YCHSQLMEEARNLFERMPERNGVSWTV 193

Query: 526 M 526
           M
Sbjct: 194 M 194


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 393/735 (53%), Gaps = 55/735 (7%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           MN+  +   + R  L  S+    ++L    G  LH   VK   +    L+N  +++Y+KC
Sbjct: 1   MNQTPWKFKTFRDLLLKSV--AERDLFT--GKSLHALYVKSIVASSTYLSNHFVNLYSKC 56

Query: 61  GEMNGACA-------------------------------VFDKMLERNVVSWTALMCGFL 89
           G ++ A A                               +FD++ + + VS+  L+ G+ 
Sbjct: 57  GRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA 116

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
                 A + LF +M     + + FTLS  I A      V+   Q+H   +  GF+    
Sbjct: 117 DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSS 174

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           V N+ +  YSK G + EA  +F  M   +  ++WN+MI  Y       K L L+++M   
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG-C- 266
           G   D FT  S L A  SL  + GG Q HG LI +GF  +  + +   L+DFY KCG C 
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN--SHVGSGLIDFYSKCGGCD 292

Query: 267 -LVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLSSMM 324
            + ++ +VF  I    ++ W+++I GY+  E L+E A++ FRQ++    + D      + 
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352

Query: 325 GVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
              ++ +   Q KQIH  A K  +PS    SV+N+++ +Y K G + +A  +F+ MP  N
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSN-RISVNNALISLYYKSGNLQDARWVFDRMPELN 411

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            V++  +I GY +HG   EA+ L+++ML   + P+ + ++AVLSAC+H G V+E QEYF+
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +    +++P  EHYSC++D LGRAG+L+EA+  I++MP KP    W  LL ACR H ++
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
            L       L+ +       YVM++N++ADA  W E   +RK  R K ++K  G SW+EV
Sbjct: 532 ALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEESKEESLRV 621
            K+ H F   D +HP+  ++++ L EM K+MK ++G+V   K+A+  + +    +E +R+
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK-KVGYVMDKKWAMVKEDEAGEGDEEMRL 650

Query: 622 --HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLA+   L    ++ + G+ + V KNLR+CGDCH  IK +S +     +VRD  R
Sbjct: 651 GHHSEKLAVAFGL----MSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLR 706

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ G CSCGDYW
Sbjct: 707 FHCFKDGKCSCGDYW 721


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/643 (34%), Positives = 354/643 (55%), Gaps = 43/643 (6%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           L+  YA   ++  A  VFD++ ERNV+    ++  ++ NG     + +F  M   +V+P+
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
            +T    +KA     ++  G +IHG   K G      VGN ++ MY KCG ++EA  + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            M  + +++WN+++ GY      D  L + R+M+      D  T  S L A  +      
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT----- 254

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
                    T    Y         + D + K G             +KS++SW+ +I  Y
Sbjct: 255 --------TTENVMY---------VKDMFFKMG-------------KKSLVSWNVMIGVY 284

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSG 349
            +     EA+EL+ ++     + D   ++S++    D + +  GK+IH Y  +   +P+ 
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           L   + N+++DMY KCG +++A ++F  M  ++VV+WT +I+ YG  G   +AV LF K+
Sbjct: 345 L---LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
               + PD +A++  L+ACSH+GL+EE +  F  + +  ++ PR+EH +C+VD LGRAG+
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           + EA   I+ M ++P+  +W  LL ACRVH D ++G    + L +L  +    YV++SNI
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521

Query: 530 HADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           +A AG W E   +R + +SKGLKK  G S VEV++ IH F  GD +HP +++I++ L  +
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581

Query: 590 EKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ-PGKVIRVF 648
            K+MK ELG+V   + ALHD++EE KE  L VHSEKLAI  AL+     E+     IR+ 
Sbjct: 582 VKKMK-ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           KNLR+CGDCH   K +S+I     ++RD  RFH F  GVCSC 
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 43/412 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  +  G ++HG+  K+G S  L + N L+ MY KCG ++ A  V D+M  R+V
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+ QN      L +  +M S  +  +  T+++      +L +V N    + M
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS------LLPAVSNTTTENVM 260

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K              DM+ K G+             KSL++WN MI  Y+      + 
Sbjct: 261 YVK--------------DMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEA 293

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + L+ +M+  G  PD  + TS L ACG   ++  G +IHG++       ++  ++  +L+
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL--LLENALI 351

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCGCL +AR VF+ ++ + V+SW+++I  Y       +A+ LF +L++  L  D  
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 319 VLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
              + +   +   L+E+G+   ++     K+   L+      +VD+  + G + EA    
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRFI 469

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +M ++ N   W  ++     H  +   +GL     L  + P+   Y  +LS
Sbjct: 470 QDMSMEPNERVWGALLGACRVH--SDTDIGLLAADKLFQLAPEQSGYYVLLS 519


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/599 (36%), Positives = 337/599 (56%), Gaps = 15/599 (2%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +SL+  M  S   P+ F+    +K+   LS   +G Q+H   ++ G E  P V  ++I M
Sbjct: 35  ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISM 94

Query: 158 YSKCGRINEAARMFDVMPAKSL--ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           Y KCG + +A ++F+  P  S   + +NA+I+GY           +FR+M+E G   D  
Sbjct: 95  YCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSV 154

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T    +  C     +  G  +HG  +  G  YS +  +  S +  Y+KCG +   RR+FD
Sbjct: 155 TILGLVPLCTVPEYLWLGRSLHGECVKGG-TYS-EVAVLNSFITMYMKCGSVESGRRLFD 212

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  K +I+W+++I GY+Q     + +ELF Q++   +  D F L S++   A     + 
Sbjct: 213 EMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 272

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+++           +  +SN+++ MY +CG + +A  +F+ MPVK++V+WT +I  YG 
Sbjct: 273 GQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 332

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG+ +  + LF  M+   + PDG  ++ VLSACSHSGL ++  E F  +  + +++P  E
Sbjct: 333 HGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 392

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HYSC+VD LGRAGRLDEA   I+SMPV+P  A+W  LL AC++H ++++       ++  
Sbjct: 393 HYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 452

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           +  N   YV+MSNI++D+ +     R+R + R +  +K  G S+VE   ++H F  GD +
Sbjct: 453 EPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRS 512

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           H  TE++H++L E+E  + E  G        +   + E    + R HSE+LAI      G
Sbjct: 513 HEQTEEVHRMLDELETSVMELAG-------NMDCDRGEEVSSTTREHSERLAIAF----G 561

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            LN  PG  I V KNLRVC DCH FIK +SKI+   FVVRDA+RFH F+ GVCSC DYW
Sbjct: 562 ILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 202/413 (48%), Gaps = 10/413 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+   L   G QLH  +++ G   +  +   LI MY KCG +  A  VF++    + 
Sbjct: 57  LKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQ 116

Query: 79  --VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
             V + AL+ G+  N        +F +M  + V  +  T+   +    V   +  G  +H
Sbjct: 117 LGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLH 176

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G C+K G      V NS I MY KCG +    R+FD MP K LITWNA+I+GY   G + 
Sbjct: 177 GECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAY 236

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L LF +M+  G  PD FT  S L +C  LG+   G ++   +  +GF  +V   ++ +
Sbjct: 237 DVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNV--FLSNA 294

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+  Y +CG L +AR VFD++  KS++SW+++I  Y         + LF  + +R ++ D
Sbjct: 295 LISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPD 354

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
           G V   ++   +   L ++G ++   A K    L+    +   +VD+  + G +DEA E 
Sbjct: 355 GAVFVMVLSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 413

Query: 375 FNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            + MPV+ +   W  ++     H     A   F K++  + EP  + Y  ++S
Sbjct: 414 IDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI--EFEPMNIGYYVLMS 464



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 166/327 (50%), Gaps = 6/327 (1%)

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +WN  +          + + L+R M   G  PD F+F   LK+C SL     G Q+H  +
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV--ISWSSLILGYAQEENL 298
           I  G     +  +  +L+  Y KCG + +AR+VF+     S   + +++LI GY     +
Sbjct: 77  IRGGC--EAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKV 134

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
           ++A  +FR+++E  + VD   +  ++ +      +  G+ +H    K  +  + +V NS 
Sbjct: 135 SDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSF 194

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           + MY+KCG ++    LF+EMPVK ++TW  +I+GY ++GLA + + LF +M    V PD 
Sbjct: 195 ITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDP 254

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
              ++VLS+C+H G  +  QE    L       P +   + ++    R G L +A+ + +
Sbjct: 255 FTLVSVLSSCAHLGAKKIGQE-VGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFD 313

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELG 505
            MPVK S+  W  ++    +HG  E G
Sbjct: 314 IMPVK-SLVSWTAMIGCYGMHGMGETG 339


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/747 (31%), Positives = 401/747 (53%), Gaps = 76/747 (10%)

Query: 6    FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            F+L S R  L    RC +   L     QLH  L   G       +  LI+ YA+ G    
Sbjct: 344  FTLNSSRS-LTSHKRCATSTTL----TQLHAHLFITGLHRHPPASTKLIESYAQIGIFES 398

Query: 66   ACAVFDKMLERNVVSWTALM-C----GFLQ------------------------------ 90
            +  VFD   + +   W  L+ C    GF +                              
Sbjct: 399  SKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACS 458

Query: 91   ----------NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS--------GVLSSVENG 132
                      NG A   L +F QM S +V+P+  T+ +  +A         G L  V+ G
Sbjct: 459  GFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEG 518

Query: 133  MQIHGMCMKSGFEWN-PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
              +HG  ++   +     +G +++++Y+  G + +  ++F+ +  K++++WN +I+ +  
Sbjct: 519  RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTR 578

Query: 192  AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
             G  ++ LLLF +MQ  G +PD ++  S+L ACG++     G QIHG++I +G   +   
Sbjct: 579  NGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG---NFND 635

Query: 252  VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
             +  +L+D Y KCG +  A ++F+ I++KS+++W+S+I G++Q     EA+ LF Q+   
Sbjct: 636  FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 695

Query: 312  SLQVDGFVLSSMMGVFADFALVEQGKQIH----AYAAKVPSGLDTSVSNSIVDMYLKCGL 367
             +++D     S++   +    +E+GK +H     Y  +  S LDT+++    DMY KCG 
Sbjct: 696  CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALT----DMYSKCGE 751

Query: 368  IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
            +  A  +F+ M  +++V+W+V+I GYG HG     + LF +ML   ++P+ + ++ +LSA
Sbjct: 752  LQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSA 811

Query: 428  CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            CSH+G VEE + YF+ + ++  ++P+ +H++C+VD L RAG L+ A  +I S+P   + +
Sbjct: 812  CSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSS 870

Query: 488  IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            IW  LL+ CR+H  +++ + + + LL +D  +   Y ++SNI+A+ G+W++  ++R + +
Sbjct: 871  IWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMK 930

Query: 548  SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            SKGL+KV G S +E+DK+I+ F  GD +H  T+ I++ L      +  ++ +      ++
Sbjct: 931  SKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQV-YDSEPDNSI 989

Query: 608  HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
                + +KE ++  HSEKLAI   ++    N +PG  +R+ KNLRVC DCH F K  SKI
Sbjct: 990  VGTSKFNKENNVVSHSEKLAIAFGII----NTRPGTTLRISKNLRVCRDCHSFAKIASKI 1045

Query: 668  LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                 ++RD  RFH F  G CSC DYW
Sbjct: 1046 TGREIIMRDLNRFHCFRNGSCSCNDYW 1072


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/570 (37%), Positives = 325/570 (57%), Gaps = 12/570 (2%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G Q+H   + +G+     +   ++ MY++CG + +A  + D MP +++++W AMI+
Sbjct: 50  ALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMIS 109

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLG-SVGGGTQIHGFLITSGF 245
           GY       +   LF  M   G  P+EFT  S L +C GS G       Q+H F I   F
Sbjct: 110 GYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNF 169

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              +   +  SL+D Y +   + EARRVFD++  + V+S+++++ GY +     EA+ LF
Sbjct: 170 --ELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLF 227

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           RQL    +Q +    S ++   +  + ++ GKQ+H    +       ++ NS++DMY KC
Sbjct: 228 RQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKC 287

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +  +  +F+ MP ++VV+W  ++ GYG+HG+A E V LFR M  D V+PD V  LAVL
Sbjct: 288 GKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLLAVL 346

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
              SH GLV+E  + F  +  ++      +HY C++D LGR+G+L++A  LI+ MP +P+
Sbjct: 347 LGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPT 406

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
            AIW +LL ACRVH ++ +G  V + L  ++ +N  NYV++SNI+A A  W +  RLRKL
Sbjct: 407 RAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKL 466

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              K + K  GRSW+ +DK IH F+  +  HP  E I+  + E+   +K   GFV  +  
Sbjct: 467 MLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAA-GFVPDLSC 525

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGL 664
            LHD+ +E KE  L  HSEKLAI       GL   P  + I+V KNLR+C DCH F K +
Sbjct: 526 VLHDVDDEQKERMLLGHSEKLAITF-----GLMSTPSDLTIQVMKNLRICVDCHNFAKFV 580

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK+      +RD  RFH    G C+CGDYW
Sbjct: 581 SKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 221/409 (54%), Gaps = 9/409 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C     L  G Q+H  +V  G+   L L   L+ MYA+CG +  A  V D M ERNVVSW
Sbjct: 45  CVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSW 104

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM--QIHGMC 139
           TA++ G+ QN        LF  M  +  +PNEFTL++ + +      +      Q+H   
Sbjct: 105 TAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFA 164

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +K  FE +  VG+S++DMY++   I EA R+FD++PA+ ++++  +++GY   G  ++ L
Sbjct: 165 IKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEAL 224

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            LFR++   G   ++ TF+  L A   L S+  G Q+HG ++    P+ +   +  SL+D
Sbjct: 225 NLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM--ALQNSLID 282

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG L+ +RRVFD + ++SV+SW+++++GY +     E ++LFR + ++ ++ D   
Sbjct: 283 MYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVT 341

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           L +++  ++   LV++G  +  +  K  S  L+T     ++D+  + G +++A  L  +M
Sbjct: 342 LLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKM 401

Query: 379 PVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           P +     W  ++     H  A   VG F    L D+EP+      +LS
Sbjct: 402 PFQPTRAIWGSLLGACRVH--ANVHVGEFVAQKLFDIEPENAGNYVILS 448



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 153/297 (51%), Gaps = 28/297 (9%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           + + +  C    ++  G Q+H  ++T+G  Y     +A  LV  Y +CG L +A  V D 
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAG--YRPALYLATRLVIMYARCGALEDAHNVLDG 95

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           + +++V+SW+++I GY+Q E  AEA +LF  +     + + F L+S++        + Q 
Sbjct: 96  MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155

Query: 337 --KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
             KQ+HA+A K    L   V +S++DMY +   I EA  +F+ +P ++VV++T I++GY 
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYT 215

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS-----------HSGLVEESQEYFSR 443
           + GL +EA+ LFR++  + ++ + V +  +L+A S           H  ++     +F  
Sbjct: 216 RLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMA 275

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           L N             ++D   + G+L  ++ + ++MP + S+  W  +L     HG
Sbjct: 276 LQNS------------LIDMYSKCGKLLYSRRVFDNMPER-SVVSWNAMLMGYGRHG 319


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/582 (34%), Positives = 344/582 (59%), Gaps = 7/582 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           ++V +R  ++  L  CS    L+ G Q+H  +++ G   D+ + N LID Y KC  +   
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD+M+ +N++SWT ++ G++QN      + LF +M     KP+ F  ++ + + G L
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            ++E G Q+H   +K+  E N  V N +IDMY+K   + +A ++FDVM  +++I++NAMI
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY       + L LF +M+     P   TF S L    SL ++    QIHG +I  G  
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV- 371

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+      +L+D Y KC  + +AR VF+ + +K ++ W+++  GY Q     EA++L+ 
Sbjct: 372 -SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS 430

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLK 364
            L+    + + F  ++++   ++ A +  G+Q H    K+  GLD    V+N++VDMY K
Sbjct: 431 TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM--GLDFCPFVTNALVDMYAK 488

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG I+EA ++FN    ++VV W  +I+ + +HG A+EA+G+FR+M+ + ++P+ V ++AV
Sbjct: 489 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSH+G VE+   +F+ +     +KP  EHY+C+V  LGR+G+L EAK  IE MP++P
Sbjct: 549 LSACSHAGXVEDGLNHFNSMPGFG-IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEP 607

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           +  +W++LLSACR+ G++ELG+   E+ +  D  +  +Y+++SNI A  G W + +++R 
Sbjct: 608 AAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRD 667

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
              S  + K  GRSW+EV+ +++ F     TH   + I  VL
Sbjct: 668 RMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVL 709



 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 154/490 (31%), Positives = 274/490 (55%), Gaps = 6/490 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +R C++  +++ G QLHG +V+ GF  D+ +   LID Y+K G++  A  VFD++L
Sbjct: 40  LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLL 99

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+  V+WT ++ G+ + G +   L LF QM  ++V P+ + +S+ + A  +L  +E G Q
Sbjct: 100 EKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 159

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G E +  V N +ID Y+KC R+    ++FD M  K++I+W  MI+GY+   +
Sbjct: 160 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 219

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + LF +M   G  PD F  TS L +CGSL ++  G Q+H + I +    +    + 
Sbjct: 220 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESN--EFVK 277

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y K   L +A++VFD++ +++VIS++++I GY+ +E L+EA+ELF ++R R   
Sbjct: 278 NGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 337

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                  S++GV A    +E  KQIH    K    LD    ++++D+Y KC  + +A  +
Sbjct: 338 PSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHV 397

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EM  K++V W  +  GY +H   +EA+ L+  +     +P+   + A+++A S+   +
Sbjct: 398 FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASL 457

Query: 435 EESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              Q++ ++L        P + +   +VD   + G ++EA+ +  S  +   +  W +++
Sbjct: 458 RHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMI 514

Query: 494 SACRVHGDLE 503
           S    HG+ E
Sbjct: 515 STHAQHGEAE 524



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 223/427 (52%), Gaps = 15/427 (3%)

Query: 92  GNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           G ++  L +F  +   S + PNEF L++ I+A   L  VE G Q+HG  ++SGF+ +  V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G S+ID YSK G I  A  +FD +  K+ +TW  +IAGY   G S   L LF +M+E   
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           +PD +  +S L AC  L  + GG QIH +++  G    V  V    L+DFY KC  +   
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV--NVLIDFYTKCNRVKAG 192

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD +  K++ISW+++I GY Q     EAM+LF ++     + DGF  +S++      
Sbjct: 193 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSL 252

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +EQG+Q+HAY  K     +  V N ++DMY K  L+ +A ++F+ M  +NV+++  +I
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY       EA+ LF +M +    P  + ++++L   +    +E S++    L     +
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHG-LIIKXGV 371

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL----------SACRVHG 500
              +   S ++D   +   + +A+++ E M  K  I +W  +            A +++ 
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYS 430

Query: 501 DLELGRE 507
            L+  R+
Sbjct: 431 TLQFSRQ 437


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/561 (35%), Positives = 322/561 (57%), Gaps = 7/561 (1%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H     +G   N  V N ++ MY + G + +A  +FD M  +   +W+ ++ GY   G
Sbjct: 71  QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVG 130

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
                  +FR++   G   D+++    ++AC  L  +  G  IH   +  G  Y     +
Sbjct: 131 NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYG--HFV 188

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y +C  + +A ++F  + ++ + +W+ +I   A+     E++  F ++R + +
Sbjct: 189 CATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGI 248

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   L +++   A    + + K IHAY       LD  +  +++DMY KCG ++ A  
Sbjct: 249 VPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARW 308

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ M V+NV+TW+ +I  YG HG  ++A+ LF  ML   + P+ + ++++L ACSH+GL
Sbjct: 309 IFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGL 368

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +EE Q +FS + ++  + P ++HY+C+VD LGRAGRLDEA  +IE MPV+    +W  LL
Sbjct: 369 IEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
            ACR+H  L+L   V   LL+L    P +YV++SNI+A+AG W +  + R L    GL+K
Sbjct: 429 GACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRK 488

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
           + GR+W+EV ++++ F  GD THP + +I+++L  + +++ E  G+       L+D+ EE
Sbjct: 489 IPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKL-EVAGYHPDTNDVLYDVDEE 547

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            K+  L  HSEKLAI   L    L    G  IR+ KNLRVCGDCH F K +S I +   +
Sbjct: 548 VKQGLLYSHSEKLAIAFGL----LVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTII 603

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRDA RFH F+ GVCSC DYW
Sbjct: 604 VRDAKRFHHFKEGVCSCRDYW 624



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           S  L  + +R   SL  C +NL      Q+H  +   G   +L + N L+ MY + G + 
Sbjct: 46  SHVLHYDTKRFRSSLLSC-RNLF--QVRQVHAQIATNGAFRNLAVANKLLYMYVERGALE 102

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +FD M +R+  SW+ ++ G+ + GN  +C  +F ++  S    ++++    I+A  
Sbjct: 103 DAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACR 162

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L  ++ G  IH + +K G ++   V  +++DMY++C  + +A ++F  M  + L TW  
Sbjct: 163 DLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTV 222

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI     +G   + L+ F +M+  G +PD+    + + AC  LG++     IH ++  +G
Sbjct: 223 MIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG 282

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             YS+  ++  +++D Y KCG +  AR +FD ++ ++VI+WS++I  Y       +A+EL
Sbjct: 283 --YSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALEL 340

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA-AKVPSGLDTSVSNSIVDMYL 363
           F  +    +  +     S++   +   L+E+G++  +    +     D      +VD+  
Sbjct: 341 FPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLG 400

Query: 364 KCGLIDEATELFNEMPV-KNVVTWTVII 390
           + G +DEA E+   MPV K+ V W  ++
Sbjct: 401 RAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 148/308 (48%), Gaps = 7/308 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C     L  G  +H   +K G  +   +   L+DMYA+C  +  A  +F KM +R++
Sbjct: 158 IRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDL 217

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +WT ++    ++G     L  F +M +  + P++  L T + A   L ++     IH  
Sbjct: 218 ATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAY 277

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              +G+  + ++G ++IDMY+KCG +  A  +FD M  +++ITW+AMIA Y   G  +K 
Sbjct: 278 INGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKA 337

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GS 256
           L LF  M   G +P+  TF S L AC   G +  G +   F  +    Y V   +     
Sbjct: 338 LELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQR---FFSSMWDEYGVTPDVKHYTC 394

Query: 257 LVDFYVKCGCLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +VD   + G L EA  + + +  +K  + W +L+       +L  A  + R L +   Q 
Sbjct: 395 MVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQK 454

Query: 316 DG-FVLSS 322
            G +VL S
Sbjct: 455 PGHYVLLS 462



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 10/165 (6%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           Q +Q+HA  A   +  + +V+N ++ MY++ G +++A ELF+ M  ++  +W+VI+ GY 
Sbjct: 68  QVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYA 127

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           K G       +FR++L      D  +   V+ AC      +       RL +   +K  +
Sbjct: 128 KVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACR-----DLKDLKCGRLIHCITLKCGL 182

Query: 455 E--HYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +  H+ C  +VD   R   +++A  +   M  K  +A W  ++ A
Sbjct: 183 DYGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGA 226


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/592 (35%), Positives = 349/592 (58%), Gaps = 17/592 (2%)

Query: 109 VKPNEFTLSTNIKASGVLSSVEN-----GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           V P+EF  +++  A+ +   ++      G  +H   +K G   +    N +++MY K   
Sbjct: 31  VSPSEF--NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDF 88

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLK 222
           + +A+++FD MP ++ I++  +I GY  +    + + LF ++  H E+ P++FTF S L+
Sbjct: 89  LCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL--HREVLPNQFTFASVLQ 146

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           AC ++  +  G QIH  +I  G    V   ++ +L+D Y KCG +  +  +F     ++ 
Sbjct: 147 ACATMEGLNLGNQIHCHVIKIGLHSDV--FVSNALMDVYAKCGRMENSMELFAESPHRND 204

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ++W+++I+G+ Q  +  +A+ LF  + E  +Q      SS +   A  A +E G QIH+ 
Sbjct: 205 VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSL 264

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
             K     D  V+N+++DMY KCG I +A  +F+ M  ++ V+W  +I+GY  HGL +EA
Sbjct: 265 TVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREA 324

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + +F KM   +V+PD + ++ VLSAC+++GL+++ Q YF+ +  D  ++P IEHY+C+V 
Sbjct: 325 LRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVW 384

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
            LGR G LD+A  LI+ +P +PS+ +W+ LL AC +H D+ELGR   + +L ++  +   
Sbjct: 385 LLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKAT 444

Query: 523 YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
           +V++SN++A A  W+    +RK  + KG+KK  G SW+E    +H F  GD +HP    I
Sbjct: 445 HVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 504

Query: 583 HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
           + +L  +  + K+  G++      L D+++E KE  L VHSE+LA+   ++R       G
Sbjct: 505 NGMLEWLHMKTKKA-GYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIR----TPSG 559

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IR+ KNLR+C DCH  IK +SK+++   VVRD  RFH F+ G+CSCGDYW
Sbjct: 560 SPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 209/378 (55%), Gaps = 7/378 (1%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A++L+ C +      G  LH  ++K G   DL   N L++MY K   +  A  +FD+M E
Sbjct: 42  ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           RN +S+  L+ G+ ++      + LF ++    V PN+FT ++ ++A   +  +  G QI
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQI 160

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   +K G   +  V N+++D+Y+KCGR+  +  +F   P ++ +TWN +I G+V  G  
Sbjct: 161 HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDG 220

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +K L LF  M E+     E T++S L+AC SL ++  G QIH   + + F   +  V+  
Sbjct: 221 EKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI--VVTN 278

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           +L+D Y KCG + +AR VFDL+ ++  +SW+++I GY+      EA+ +F +++E  ++ 
Sbjct: 279 ALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKP 338

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEATE 373
           D      ++   A+  L++QG Q +  +     G++  + +    ++L  + G +D+A +
Sbjct: 339 DKLTFVGVLSACANAGLLDQG-QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVK 397

Query: 374 LFNEMPVK-NVVTWTVII 390
           L +E+P + +V+ W  ++
Sbjct: 398 LIDEIPFQPSVMVWRALL 415



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 18/201 (8%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +N + + + +     + +LR C+    L+ G+Q+H   VK  F  D+++ N LIDMYAKC
Sbjct: 228 LNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKC 287

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VFD M +++ VSW A++ G+  +G  +  L +F +M  + VKP++ T     
Sbjct: 288 GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTF---- 343

Query: 121 KASGVLSSVEN-GMQIHG------MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMF 171
              GVLS+  N G+   G      M    G E  P + +   ++ +  + G +++A ++ 
Sbjct: 344 --VGVLSACANAGLLDQGQAYFTSMIQDHGIE--PCIEHYTCMVWLLGRGGHLDKAVKLI 399

Query: 172 DVMPAK-SLITWNAMIAGYVL 191
           D +P + S++ W A++   V+
Sbjct: 400 DEIPFQPSVMVWRALLGACVI 420


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/616 (36%), Positives = 346/616 (56%), Gaps = 16/616 (2%)

Query: 84  LMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNI---KASGVLSSVENGMQIHGM 138
           ++ GF++N   +  + +F  M  G+       F L+T I    A   L  ++ GMQI  +
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGP----RFDLTTVIAVLPAVAELQELKLGMQILCL 56

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF  +  +   +I ++SKCG +  A  +F  +  K LI+ NAMI+G+   G ++  
Sbjct: 57  AIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDS 116

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF+++   GE     T    +      G       IHGF +  G      + ++ +L 
Sbjct: 117 VRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGI--VSHSSVSTALT 174

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y +   ++ AR++FD   +K++ SW+++I G  Q      A+ LF+ +++ ++  +  
Sbjct: 175 TVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPV 234

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A    +  G+ +H+         +  VS +++DMY KCG I  A ELF+ M
Sbjct: 235 TVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLM 294

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
           P KN VTW  +I+GYG HG  +EA+ LF  ML   V+P G+ +L+VL ACSH+GLV+E  
Sbjct: 295 PEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGD 354

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
             F  + +D   +P  EHY+C+VD LGRAG+L +A   I++MPV+P   +W  LL AC +
Sbjct: 355 GIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMI 414

Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
           H D  L     E L  LD +N   YV+MSNI++    + +   +R++A+ K L K  G +
Sbjct: 415 HKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCT 474

Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
            +E+ +  H F  GD +HP ++ I+  L ++  +M E  GF       LHD++EE KE +
Sbjct: 475 LIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEA-GFQTETTTVLHDLEEEEKELT 533

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           ++VHSEKLAI   L+    + +PG  IR+ KNLRVC DCH + K LSKI K V VVRDA 
Sbjct: 534 MKVHSEKLAIAFGLI----STEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDAN 589

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G+CSCGDYW
Sbjct: 590 RFHHFKDGLCSCGDYW 605



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 199/401 (49%), Gaps = 6/401 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G+Q+    +K GF   + L   LI +++KCGE+  A  +F ++ +++++S  A++ G
Sbjct: 47  LKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISG 106

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F  NG  +  + LF ++ SS  + +  T+   I              IHG C+K G   +
Sbjct: 107 FTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSH 166

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V  ++  +Y +   +  A ++FD    K+L +WNAMI+G    G +D  + LF+ MQ+
Sbjct: 167 SSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQK 226

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
           +   P+  T TS L AC  +G++  G  +H  + ++ F  +V   ++ +L+D Y KCG +
Sbjct: 227 NNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNV--YVSTALIDMYAKCGSI 284

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR +FDL+ +K+ ++W+++I GY    +  EA++LF  +   S++  G    S++   
Sbjct: 285 TVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYAC 344

Query: 328 ADFALVEQGKQI-HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
           +   LV++G  I H                 +VD+  + G + +A E    MPV+     
Sbjct: 345 SHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPV 404

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           W  ++     H     A     K+   +++P+ + Y  ++S
Sbjct: 405 WGALLGACMIHKDTNLAHVASEKLF--ELDPENIGYYVLMS 443



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +H  +    F  ++ ++  LIDMYAKCG +  A  +FD M E+N 
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W A++ G+  +G+ +  L LF  M SSSVKP   T  + + A      V+ G  I H 
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M    GFE        ++D+  + G++ +A      MP +     W A++  
Sbjct: 360 MVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGA 411


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/651 (35%), Positives = 356/651 (54%), Gaps = 47/651 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I     CG++  A  +FD+M  R VVSWT L+ G L+ G  +   +LF  M 
Sbjct: 116 DVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAM- 174

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
               +P +  ++             N M IHG C                      GR++
Sbjct: 175 ----EPMDRDVAA-----------WNAM-IHGYCSN--------------------GRVD 198

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A ++F  MP++ +I+W++MIAG    G S++ L+LFR M   G           L A  
Sbjct: 199 DALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAA 258

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            + +   G QIH  +   G  +     ++ SLV FY  C  +  A RVF  +  KSV+ W
Sbjct: 259 KIPAWRVGIQIHCSVFKLG-DWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIW 317

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++L+ GY   +   EA+E+F ++    +  +    +S +        +E+GK IHA A K
Sbjct: 318 TALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVK 377

Query: 346 VPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
           +  GL++   V  S+V MY KCG + +A  +F  +  KNVV+W  +I G  +HG    A+
Sbjct: 378 M--GLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWAL 435

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF +ML + V+PDG+    +LSACSHSG++++++ +F      + +   IEHY+ +VD 
Sbjct: 436 ALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDV 495

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGR G L+EA+ ++ SMP+K +  +W  LLSACR H +L+L +     +  ++ D    Y
Sbjct: 496 LGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAY 555

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           V++SN++A +  W E   +R+  +  G+ K  G SW+ +  + H F   D +HPL EKI+
Sbjct: 556 VLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIY 615

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
           Q L  +  ++K ELG+V   ++ALHD++ E KEE L  HSE+LAI   L    L+   G 
Sbjct: 616 QKLEWLGVKLK-ELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGL----LSTVEGS 670

Query: 644 VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            I V KNLRVCGDCH  IK ++KI+    VVRD++RFH F+ G+CSCGDYW
Sbjct: 671 AITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 31  GVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G+Q+H ++ K+G + FD  ++  L+  YA C +M  AC VF +++ ++VV WTAL+ G+ 
Sbjct: 266 GIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYG 325

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            N   +  L +F +M    V PNE + ++ + +   L  +E G  IH   +K G E    
Sbjct: 326 LNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGY 385

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG S++ MYSKCG +++A  +F  +  K++++WN++I G    G     L LF +M   G
Sbjct: 386 VGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREG 445

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCL 267
             PD  T T  L AC   G +    +   F    G   SV   I    S+VD   +CG L
Sbjct: 446 VDPDGITVTGLLSACSHSGML---QKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGEL 502

Query: 268 VEARRVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQLRE 310
            EA  V   +  K+  + W +L+    +  NL  A     Q+ E
Sbjct: 503 EEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFE 546



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 32/293 (10%)

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           ++EA  +FD +P   +  +  M+  Y       + + LFR++       D  ++ S +K 
Sbjct: 71  LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRI----PFKDVVSWNSIIKG 126

Query: 224 CGSLGS----------------VGGGTQIHGF-----------LITSGFPYSVKTVIAGS 256
           C   G                 V   T + G            L  +  P         +
Sbjct: 127 CLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNA 186

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           ++  Y   G + +A ++F  +  + VISWSS+I G        +A+ LFR +    + + 
Sbjct: 187 MIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLS 246

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSNSIVDMYLKCGLIDEATELF 375
             VL   +   A       G QIH    K+     D  VS S+V  Y  C  ++ A  +F
Sbjct: 247 SGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVF 306

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            E+  K+VV WT ++TGYG +   +EA+ +F +M+  DV P+  ++ + L++C
Sbjct: 307 GEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 14/189 (7%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V        +L  C     ++ G  +H A VKMG      +   L+ MY+KCG ++ A 
Sbjct: 345 VVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAV 404

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF  + E+NVVSW +++ G  Q+G     L+LF QM    V P+  T+      +G+LS
Sbjct: 405 YVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITV------TGLLS 458

Query: 128 SV-ENGMQIHGMCMKSGFEWNPVVG------NSIIDMYSKCGRINEAARMFDVMPAKS-L 179
           +   +GM     C    F     V        S++D+  +CG + EA  +   MP K+  
Sbjct: 459 ACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANS 518

Query: 180 ITWNAMIAG 188
           + W A+++ 
Sbjct: 519 MVWLALLSA 527



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 75/140 (53%), Gaps = 15/140 (10%)

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +DEA  +F+++P  +V  +T+++  Y ++   +EA+ LFR++   DV    V++ +++  
Sbjct: 71  LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSWNSIIKG 126

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM-PVKPSI 486
           C H G +  +++ F     D+  +  +  ++ +VD L R G + EA+ L  +M P+   +
Sbjct: 127 CLHCGDIVTARKLF-----DEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDV 181

Query: 487 AIWQTLLSACRVHGDLELGR 506
           A W  +     +HG    GR
Sbjct: 182 AAWNAM-----IHGYCSNGR 196



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 9/159 (5%)

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           ++P+    S+   ++  Y +   + EA +LF  +P K+VV+W  II G    G    A  
Sbjct: 80  QIPTP-HVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARK 138

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           LF +M    V    V++  ++      G+V+E++  F  +   + M   +  ++ ++   
Sbjct: 139 LFDEMPRRTV----VSWTTLVDGLLRLGIVQEAETLFWAM---EPMDRDVAAWNAMIHGY 191

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
              GR+D+A  L   MP +  I+ W ++++    +G  E
Sbjct: 192 CSNGRVDDALQLFCQMPSRDVIS-WSSMIAGLDHNGKSE 229


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/607 (33%), Positives = 342/607 (56%), Gaps = 12/607 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V+F+ V         L  C+  +++++G QLHG +V  G   D  + N L+ MYAKCG
Sbjct: 247 NSVTFACV---------LSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCG 297

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FD M + ++V+W  ++ G++QNG       LF +M S+ +KP+  T S+ + 
Sbjct: 298 HLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLP 357

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
                +++  G +IH   +++G   +  + +++ID+Y KC  +  A ++FD      ++ 
Sbjct: 358 LLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVV 417

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
             AMI+GYVL G ++  L +FR + +     +  T  S L AC  L ++  G ++HG ++
Sbjct: 418 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHIL 477

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +G  +     +  +++D Y KCG L  A + F  I  K  + W+S+I   +Q     EA
Sbjct: 478 KNG--HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEA 535

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           ++LFRQ+     + D   +S+ +   A+   +  GK+IHA+  +     D    ++++DM
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDM 595

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG +D A  +F+ M  KN V+W  II  YG HG  K+++ LF  ML D ++PD V +
Sbjct: 596 YSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 655

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           LA++SAC H+G V+E   YF  +  +  +  R+EHY+C+VD  GRAGRL+EA  +I SMP
Sbjct: 656 LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 715

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
             P   +W TLL ACR+HG++EL       L  LD  N   YV++SN+HA+AG W    +
Sbjct: 716 FSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLK 775

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R L + +G++KV G SW++V+   H F   D +HP + +I+ +L  +   +++E G+V 
Sbjct: 776 IRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKE-GYVP 834

Query: 602 GVKYALH 608
            +   +H
Sbjct: 835 QLYLPMH 841



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 262/501 (52%), Gaps = 5/501 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  +  MGF  D+ + + LI  Y++ G ++ A  +FD+M  ++ V W  ++ G+++
Sbjct: 166 GRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG+      +F +M  +   PN  T +  +        +  G Q+HG+ + SG E +  V
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPV 285

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MY+KCG + +A R+FD+MP   L+TWN MI+GYV  G+ D+   LF +M     
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM 345

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  TF+S L       ++  G +IH ++I +G   S+   +  +L+D Y KC  +  A
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGV--SLDVFLKSALIDIYFKCRDVEMA 403

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD      ++  +++I GY        A+E+FR L +  ++ +   L+S++   A  
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +  GK++H +  K   G    V ++I+DMY KCG +D A + F  +  K+ V W  +I
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 523

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T   ++G  +EA+ LFR+M +   + D V+  A LSAC++   +   +E  + +      
Sbjct: 524 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGA-F 582

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  +   S ++D   + G LD A  + ++M  K  ++ W ++++A   HG L+    +  
Sbjct: 583 RSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFH 641

Query: 511 ILLRLDGDNPVNYVMMSNIHA 531
            +L  DG  P +   ++ I A
Sbjct: 642 GMLG-DGIQPDHVTFLAIISA 661



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 255/500 (51%), Gaps = 8/500 (1%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           +L   L+ C+    L  G Q H  ++  G  ++ +L   L+ MY  CG    A  +F ++
Sbjct: 48  QLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL 107

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
                  W  ++ GF   G     L  + +M      P+++T    IKA G L+SV  G 
Sbjct: 108 RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGR 167

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            +H      GFE +  VG+S+I  YS+ G I++A  +FD MP+K  + WN M+ GYV  G
Sbjct: 168 VVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNG 227

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             D    +F +M+     P+  TF   L  C S   +  G+Q+HG +++SG    + + +
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL--EMDSPV 285

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
           A +L+  Y KCG L +ARR+FD++ +  +++W+ +I GY Q   + EA  LF ++    +
Sbjct: 286 ANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM 345

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D    SS + + ++ A + QGK+IH Y  +    LD  + ++++D+Y KC  ++ A +
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARK 405

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F++    ++V  T +I+GY  +G+   A+ +FR +L + +  + V   +VL AC+    
Sbjct: 406 IFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAA 465

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +   +E    +  +          S I+D   + GRLD A      +  K ++  W +++
Sbjct: 466 LTLGKELHGHILKNGH-GGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVC-WNSMI 523

Query: 494 SACRVHGD----LELGREVG 509
           ++C  +G     ++L R++G
Sbjct: 524 TSCSQNGKPEEAIDLFRQMG 543


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/666 (33%), Positives = 357/666 (53%), Gaps = 50/666 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  +       +  +   LI        ++ A ++F      N+  + AL+ G  +N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  +S F  M   S++P+  TL   +K+   L  V  G  +HG  MK G E++  V  
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 153 SIIDMYSKCGRINEAARMFDVMP----AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           S++DMY K G +    ++FD  P    A+S++ WN +I G    G   K   LF  M E 
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPE- 236

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
                        +  GS  S                           L++ +V+ G L 
Sbjct: 237 -------------RNAGSWNS---------------------------LINGFVRNGDLD 256

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            AR +F  + +K+V+SW+++I G++Q  +  +A+ +F ++ E  ++ +   + S +    
Sbjct: 257 RARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACT 316

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
               ++ G++IH Y +     L+  +  ++VDMY KCG I  A+ +F E   K+++TW+V
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I G+  HG   +A+  F KM    + PD V +LA+L+ACSHSG V++   +F  +  D 
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDY 436

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P ++HY+ IVD LGRAGRLDEA + I+SMP+ P   IW  L  ACR H ++E+    
Sbjct: 437 SIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELT 496

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E LL+L+  +P +YV +SN++A  G W + ER+R L +++G++K  G S++EV+ ++H 
Sbjct: 497 AEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHS 556

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD  H   E+I   L E+    K+E G++    + LH+I+EE KE++L  HSEKLA+
Sbjct: 557 FVAGDHAHVRAEEISLKLEEITASAKQE-GYMPETAWVLHNIEEEEKEDALGSHSEKLAL 615

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              L+    +  PG  IR+ KNLRVCGDCH  +K  SK+ +   ++RD  RFH F+ G C
Sbjct: 616 AFGLI----STAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTC 671

Query: 689 SCGDYW 694
           SCGDYW
Sbjct: 672 SCGDYW 677



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 148/333 (44%), Gaps = 71/333 (21%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM-- 63
            S+  +R  L   L+  +  + +  G  LHG ++K+G  FD  +   L+DMY K GE+  
Sbjct: 132 LSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGF 191

Query: 64  ------------------------NGACAV---------FDKMLERNVVSWTALMCGFL- 89
                                   NG C V         F+ M ERN  SW +L+ GF+ 
Sbjct: 192 GLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVR 251

Query: 90  ------------------------------QNGNAKACLSLFCQMGSSSVKPNEFTLSTN 119
                                         QNG+ +  LS+F +M    V+PN+ T+ + 
Sbjct: 252 NGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSA 311

Query: 120 IKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
           + A   + +++ G +IH     +GF+ N  +G +++DMY+KCG I  A+R+F     K L
Sbjct: 312 LLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDL 371

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           +TW+ MI G+ + G  D+ L  F KM+  G  PDE  F + L AC   G+V  G     F
Sbjct: 372 LTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLN---F 428

Query: 240 LITSGFPYSVKTVIAGS--LVDFYVKCGCLVEA 270
             +    YS++  +     +VD   + G L EA
Sbjct: 429 FESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEA 461



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 4/175 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +  +L  C+K   L  G ++H  L   GF  +  +   L+DMYAKCG +  A  VF +  
Sbjct: 308 VVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETK 367

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++++W+ ++ G+  +G     L  F +M S+ + P+E      + A     +V+ G+ 
Sbjct: 368 GKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLN 427

Query: 135 IHGMCMKSGFEWNPVVGNS--IIDMYSKCGRINEAARMFDVMPAKS-LITWNAMI 186
                M+  +   P + +   I+D+  + GR++EA      MP     + W A+ 
Sbjct: 428 FFE-SMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALF 481


>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/595 (35%), Positives = 330/595 (55%), Gaps = 41/595 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +KSG   +     ++ID Y KCG + +A ++FD +P +  + W  +++   L+ 
Sbjct: 29  KLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSN 88

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG--GTQIHGFLITSGFPYSVKT 251
              K   +   +   G  PD F F+S +KAC +LGSV    G Q+H   + S  P+    
Sbjct: 89  LPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLS--PFFEDD 146

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ---- 307
           V+  SLVD Y K       R VFD I + S ISW+++I GYA+     EA+ELFR+    
Sbjct: 147 VVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFK 206

Query: 308 ---------------------------LRERSLQV-DGFVLSSMMGVFADFALVEQGKQI 339
                                      +R   + + D  VLSS++G  A+ A+ E GKQ+
Sbjct: 207 NLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQV 266

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           H     +       +SN++VDMY KC  +  A  +F EM  K+VV+WT II G  +HGLA
Sbjct: 267 HCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLA 326

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC 459
           +EA+ L+  M+L  V+P+ V ++ ++ ACSH GLV + +  F  +  D  ++P ++HY+C
Sbjct: 327 EEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTC 386

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           ++D   R+G LDEA+NLI +MPVKP    W  LLSAC+ HG+ ++   + + LL L  ++
Sbjct: 387 LLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPED 446

Query: 520 PVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLT 579
           P +Y+++SNI+A AG W     +RKL   K +KKV G S V++ +E   F+ G+ + P+ 
Sbjct: 447 PSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMK 506

Query: 580 EKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           ++I  ++ +++  M+   G+V      L D+ ++ KE  L  HSE+LA+   L++     
Sbjct: 507 DEILGLMTKLDSEMRRR-GYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKA---- 561

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            PG  IR+ KNLRVCGDCH  +K +S I      VRD  R+H F+ G CSC D+W
Sbjct: 562 VPGTTIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 233/493 (47%), Gaps = 51/493 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW-TALMCGFLQN 91
           +LH  ++K G +        LID Y KCG +  A  +FD + +++ V+W T L    L N
Sbjct: 29  KLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSN 88

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV--ENGMQIHGMCMKSGFEWNPV 149
              KA  S+   +    ++P+ F  S+ IKA   L SV  + G Q+H   + S F  + V
Sbjct: 89  LPHKA-FSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDV 147

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY-------------------- 189
           V +S++DMY+K    +    +FD +   S I+W AMI+GY                    
Sbjct: 148 VKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKN 207

Query: 190 -----------VLAGYSDKGLLLFRKMQEHG-EIPDEFTFTSTLKACGSLGSVGGGTQIH 237
                      V +G ++  L LF +M+  G  I D    +S + AC +      G Q+H
Sbjct: 208 LYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVH 267

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
             +IT G  Y     I+ +LVD Y KC  +V A+ +F  + +K V+SW+S+I+G AQ   
Sbjct: 268 CVVITLG--YESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGL 325

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS-GLDTSVSN 356
             EA+ L+  +    ++ +      ++   +   LV +G+ +  + + V   G+  S+ +
Sbjct: 326 AEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRAL--FKSMVEDFGIRPSLQH 383

Query: 357 --SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
              ++D++ + G +DEA  L   MPVK +  TW  +++    HG  K AV +   +L  D
Sbjct: 384 YTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLL--D 441

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           ++P+  +   +LS       + E+     +L   K +K ++  YSC+   LGR  ++  A
Sbjct: 442 LKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVK-KVPGYSCV--DLGREFQVFHA 498

Query: 474 KNLIESMPVKPSI 486
                S P+K  I
Sbjct: 499 GE--ASQPMKDEI 509



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 36/312 (11%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF-- 88
           G QLH   +   F  D ++ + L+DMYAK    +   AVFD + E + +SWTA++ G+  
Sbjct: 130 GKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYAR 189

Query: 89  -----------------------------LQNGNAKACLSLFCQMGSSSVK-PNEFTLST 118
                                        +Q+GNA   L LF +M    V   +   LS+
Sbjct: 190 SGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSS 249

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            + A    +  E G Q+H + +  G+E    + N+++DMY+KC  +  A  +F  M  K 
Sbjct: 250 VVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKD 309

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           +++W ++I G    G +++ L L+  M   G  P+E TF   + AC  +G V  G  +  
Sbjct: 310 VVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFK 369

Query: 239 FLITS-GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS-VISWSSLILGYAQEE 296
            ++   G   S++      L+D + + G L EA  +   +  K    +W++L+       
Sbjct: 370 SMVEDFGIRPSLQHYTC--LLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHG 427

Query: 297 NLAEAMELFRQL 308
           N   A+ +   L
Sbjct: 428 NTKMAVRIADHL 439



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 4/177 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  +  C+ + + + G Q+H  ++ +G+   L ++N L+DMYAKC ++  A  +F +M 
Sbjct: 247 LSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMR 306

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++VVSWT+++ G  Q+G A+  L+L+  M  + VKPNE T    I A   +  V  G  
Sbjct: 307 RKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRA 366

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           +    M   F   P + +   ++D++S+ G ++EA  +   MP K    TW A+++ 
Sbjct: 367 LFK-SMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSA 422



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 336 GKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
            K++HA   K  SGL+       +++D Y KCGL+ +A +LF+ +P ++ V W  +++  
Sbjct: 27  AKKLHAQIIK--SGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSAC 84

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
               L  +A  +   +L + ++PD   + +++ AC++ G V 
Sbjct: 85  NLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVH 126


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/670 (32%), Positives = 373/670 (55%), Gaps = 9/670 (1%)

Query: 26  LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM 85
           L++  G  LHG  +K G +   ++NN L+ MY K      A  VFD+M+ R+ V++  ++
Sbjct: 221 LVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMI 280

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           CG+L+    +  + +F +      KP+  T+++ + A G L  +     I+   +++GF 
Sbjct: 281 CGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFV 339

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
               V N +ID+Y+KCG +  A  +F+ M  K  ++WN++I+GY+ +G   + + LF+ M
Sbjct: 340 LESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
               E  D  T+   +     L  +  G  +H   I SG    +   ++ +L+D Y KCG
Sbjct: 400 MIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGI--YIDLSVSNALIDMYAKCG 457

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            + ++ ++F+ +     ++W+++I    +  + A  +++  Q+R+  +  D       + 
Sbjct: 458 EVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLP 517

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           + A  A    GK+IH    +     +  + N++++MY KCG ++ +  +F  M  ++VVT
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVT 577

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +I  YG +G  ++A+  F  M    + PD V ++A++ ACSHSGLVE+    F ++ 
Sbjct: 578 WTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMK 637

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
              ++ P IEHY+C+VD L R+ ++ +A+  I++MP++P  +IW ++L ACR  GD+E  
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETA 697

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             V   ++ L+ D+P   ++ SN +A    W++   +RK  R K +KK  G SW+E+ K+
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKK 757

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV-HSE 624
           +H F  GDD+ P +E IH+ L  +   M +E G++   +    +++EE ++  L   HSE
Sbjct: 758 VHVFCSGDDSAPQSEAIHKSLEILYSLMAKE-GYIPDSREVSQNLEEEEEKRRLICGHSE 816

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LAI   L    LN +PG  ++V KNLRVC DCHE  K +SKI+    +VRDA RFH F+
Sbjct: 817 RLAIAFGL----LNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFK 872

Query: 685 GGVCSCGDYW 694
            G+CSC D W
Sbjct: 873 DGICSCKDRW 882



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 229/411 (55%), Gaps = 3/411 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+     + G  ++  +++MGF  DL + N L+DMY++ G ++ A  VFD+M  R++
Sbjct: 113 IKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDL 172

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+  +G  +  L ++ ++ +S + P+ FT+S+ + A   L  V+ G  +HG 
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGF 232

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KSG     VV N ++ MY K  R  +A R+FD M  +  +T+N MI GY+     ++ 
Sbjct: 233 TLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEES 292

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F +  +  + PD  T TS L ACG L  +     I+ +++ +GF   +++ +   L+
Sbjct: 293 VKMFLENLDQFK-PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGF--VLESTVKNILI 349

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG ++ AR VF+ +E K  +SW+S+I GY Q  +L EAM+LF+ +     Q D  
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++ +    A ++ GK +H+   K    +D SVSN+++DMY KCG + ++ ++FN M
Sbjct: 410 TYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSM 469

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
              + VTW  +I+   + G     + +  +M  + V PD   +L  L  C+
Sbjct: 470 GTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCA 520



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 257/481 (53%), Gaps = 14/481 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALMCGFLQN 91
           ++H  ++ +G       +  LID Y+       + +VF ++   +NV  W +++  F +N
Sbjct: 25  RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKN 84

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     L  + ++  S V P+++T  + IKA   L   E G  ++   ++ GFE +  VG
Sbjct: 85  GWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVG 144

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++DMYS+ G ++ A ++FD MP + L++WN++I+GY   GY ++ L ++ +++    +
Sbjct: 145 NALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIV 204

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD FT +S L A  +L  V  G  +HGF + SG   +  +V+   L+  Y+K     +AR
Sbjct: 205 PDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGV--NSVSVVNNGLLAMYLKFSRPTDAR 262

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           RVFD +  +  ++++++I GY + E + E++++F +  ++  + D   ++S++       
Sbjct: 263 RVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLR 321

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +   K I+ Y  +    L+++V N ++D+Y KCG +  A ++FN M  K+ V+W  II+
Sbjct: 322 DLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           GY + G   EA+ LF+ M++ + + D + YL ++S  +    ++     F +  +   +K
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLK-----FGKGLHSNGIK 436

Query: 452 PRI----EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
             I       + ++D   + G + ++  +  SM    ++  W T++SAC   GD   G +
Sbjct: 437 SGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT-WNTVISACVRFGDFATGLQ 495

Query: 508 V 508
           V
Sbjct: 496 V 496


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/555 (38%), Positives = 330/555 (59%), Gaps = 17/555 (3%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMF-----DVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           NP +   +I ++S C R++EA R+F     DV   +S+  W AM  GY   GY  + LLL
Sbjct: 108 NPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV--WVAMGIGYSRNGYPKEALLL 165

Query: 202 FRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           + +M  + G++ + F F+  LKAC  LG +  G  +H  ++ +        V+  +L+  
Sbjct: 166 YYEMVCQFGQLGN-FAFSMALKACSDLGDLQTGRAVHAQVLKA--TEDPDQVVNNALLRL 222

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y + GC  EA RVFD +  ++V+SW+SLI G  +++ + EA+E FR ++ + +      L
Sbjct: 223 YSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTL 282

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++++ V A    +  GK+IHA   K  +  D  V NS+VDMY KCG +D    +FN M  
Sbjct: 283 TTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQG 342

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K++ +W  +ITGY  +G   EA+  F++M+     PDG+ ++A+LS CSH+GL ++    
Sbjct: 343 KDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRL 402

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +  D  + P +EHY+C+VD LGRAGR+ EA  ++++MP KP+ +IW +LL++CR+HG
Sbjct: 403 FEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHG 462

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           ++ L   V + L  L+ +N  NYVM+SNI+A+AG W   + +R+    +G+ K AG SW+
Sbjct: 463 NVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWL 522

Query: 561 EVDKEIH-FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           ++  +IH F  GG +    + +  +V   + + M EE+G+V      LHD+ EE +   +
Sbjct: 523 QIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAM-EEVGYVPDTGVVLHDVSEEMRAMWV 581

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSE+LA   AL+    N   G  IR+ KNLRVC DCH ++K LSK+   V V+RD  R
Sbjct: 582 CGHSERLATMFALI----NTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNR 637

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ GVCSC DYW
Sbjct: 638 FHHFKDGVCSCKDYW 652



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 191/386 (49%), Gaps = 15/386 (3%)

Query: 49  LNNDLIDMYAKCGEMNGACAVF-----DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           L   LI +++ C  ++ A  VF     D  L  +V  W A+  G+ +NG  K  L L+ +
Sbjct: 111 LKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESV--WVAMGIGYSRNGYPKEALLLYYE 168

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M     +   F  S  +KA   L  ++ G  +H   +K+  + + VV N+++ +YS+ G 
Sbjct: 169 MVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGC 228

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
            +EA R+FD MP +++++WN++IAG V      + +  FR MQ  G      T T+ L  
Sbjct: 229 FDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPV 288

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  + ++G G +IH  ++ S         +  SLVD Y KCG +   RRVF+ ++ K + 
Sbjct: 289 CARVTALGSGKEIHAVIVKS--TAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLT 346

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW++LI GYA    + EAME F+++       DG    +++   +   L + G ++    
Sbjct: 347 SWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEM- 405

Query: 344 AKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAK 400
            K+  G+  +V +   +VD+  + G I EA E+   MP K   + W  ++     HG   
Sbjct: 406 MKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVP 465

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLS 426
            A  + +++   ++EP+      +LS
Sbjct: 466 LAEAVAKRLF--ELEPNNAGNYVMLS 489



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 9/332 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS    L  G  +H  ++K     D ++NN L+ +Y++ G  + A  VFD M  RN
Sbjct: 184 ALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRN 243

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW +L+ G ++       +  F  M    +  +  TL+T +     ++++ +G +IH 
Sbjct: 244 VVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHA 303

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +KS  + +  V NS++DMY+KCG ++   R+F+ M  K L +WN +I GY + G   +
Sbjct: 304 VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTE 363

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            +  F++M   G  PD  TF + L  C   G    G ++   +      Y +   +    
Sbjct: 364 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMM---KMDYGISPTVEHYA 420

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            LVD   + G + EA  +   +  K   S W SL+       N+  A  + ++L E    
Sbjct: 421 CLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPN 480

Query: 315 VDG-FVLSSMMGVFADFALVEQGKQIHAYAAK 345
             G +V+ S   ++A+  + E  K +  +  K
Sbjct: 481 NAGNYVMLS--NIYANAGMWESVKVVREFMEK 510



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 4/182 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   L  G ++H  +VK     D  + N L+DMYAKCG M+    VF+ M 
Sbjct: 282 LTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQ 341

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++ SW  L+ G+  NG     +  F +M  S   P+  T    +         ++G +
Sbjct: 342 GKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCR 401

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVL 191
           +  M MK  +  +P V +   ++D+  + GRI EA  +   MP K   + W +++    L
Sbjct: 402 LFEM-MKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRL 460

Query: 192 AG 193
            G
Sbjct: 461 HG 462


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/655 (34%), Positives = 362/655 (55%), Gaps = 13/655 (1%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE- 75
           +SL  CS+     +  Q+H  L+         L N+L+++YAKCG ++    +F    + 
Sbjct: 34  NSLLNCSRTS--KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDD 91

Query: 76  -RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +NVVSWT+L+    +       L+ F  M  S V PN +T S  + A    ++  +G Q
Sbjct: 92  SKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQ 151

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H +  K GF     V ++++DMY+KC  +  A ++F+ MP ++L++WN MI G++    
Sbjct: 152 MHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKL 211

Query: 195 SDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            D+ +  F+ +  E+    DE +F+S   AC + G++  G Q+HG  +  G    V   I
Sbjct: 212 YDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV--YI 269

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SL D Y KCG   +  ++F     + V++W+ +I+ Y    N  +A   F  +R +  
Sbjct: 270 NNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGS 329

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D    SS++   A+ A + QG  IH    +     +  V++S++ MY KCG + +A +
Sbjct: 330 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 389

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F E   +NVV WT II    +HG A   V LF +ML + ++PD + +++VLSACSH+G 
Sbjct: 390 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 449

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           VEE   YF+ +     + P  EHY+CIVD L RAG LD AK  IE MP+KP  ++W  LL
Sbjct: 450 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 509

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           SACR H +L +G+EV   L  L+ DNP NYV++ NI    G  NE + +R+   S G++K
Sbjct: 510 SACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRK 569

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SW+++    + F   D +H  T++I++ ++E  K + ++ G+V   ++A+ +  EE
Sbjct: 570 EPGCSWIDIKNSTYVFTVHDKSHEKTKEIYE-MLEKLKELVKKKGYVAETEFAI-NTAEE 627

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
            KE+SL  HSEK+A+   L    L+   G  IR+ KNLR CGDCH  +K  S+I 
Sbjct: 628 YKEQSLWYHSEKIALAFGL----LSLPAGAPIRIKKNLRTCGDCHTVMKFASEIF 678


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/635 (34%), Positives = 351/635 (55%), Gaps = 29/635 (4%)

Query: 80  SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI----KASGVLSSVENGMQI 135
           SW   +      G+    ++LF +M +S       ++ T++    K+   L     G  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGR--------------INEAARMFDVMPAKSLIT 181
           H + ++SG   +    N+++++Y K                 +    ++FD MP K +++
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN ++ G   +G   + L L R+M   G  PD FT +S L        V  G ++HGF  
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +GF   V   +  SL+D Y  C     + +VFD +  +  I W+S++ G AQ  ++ EA
Sbjct: 201 RNGFHDDV--FVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEA 258

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIV 359
           + LFR++    ++      SS++    + A +  GKQ+HAY  +   G D +V  S+S++
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR--GGFDGNVFISSSLI 316

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY KCG +  A  +F+ +   ++V+WT +I G+  HG A+EA+ LF +M L +++P+ +
Sbjct: 317 DMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHI 376

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            +LAVL+ACSH+GLV++  +YF+ + +   + P +EH++ + D+LGR G+L+EA N I  
Sbjct: 377 TFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISG 436

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           M +KP+ ++W TLL AC+VH +  L  EV + +  L+  +  +++++SN ++ +G WNE 
Sbjct: 437 MKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEA 496

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
             LRK  R KG++K    SW+EV  + H F   D +HP  E+I   L    ++M  + G+
Sbjct: 497 AHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQ-GY 555

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V        DI+EE K   L  HSEKLAI    V G ++  PG  IRV KNLRVC DCH 
Sbjct: 556 VPNTDDVFQDIEEEQKNSVLCGHSEKLAI----VFGIISTPPGTTIRVMKNLRVCVDCHT 611

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +SKI+    V+RDA RFH F+ G+CSCGD+W
Sbjct: 612 VTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 221/431 (51%), Gaps = 26/431 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAK-------CGEMNGAC 67
           L  +L+ C+   L   G  LH   ++ G   D    N L+++Y K         EM+G+ 
Sbjct: 61  LPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSA 120

Query: 68  AV-------FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
            V       FD+M E++VVSW  L+ G  ++G     L L  +M     KP+ FTLS+ +
Sbjct: 121 VVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
                 + V  GM++HG   ++GF  +  VG+S+IDMY+ C R + + ++FD +P +  I
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WN+M+AG    G  D+ L LFR+M   G  P   TF+S + ACG+L S+  G Q+H ++
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           I  GF  +V   I+ SL+D Y KCG +  ARR+FD I+   ++SW+++I+G+A      E
Sbjct: 301 IRGGFDGNV--FISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG----KQIHAYAAKVPSGLDTSVSN 356
           A+ LF ++   +L+ +     +++   +   LV++G      +  +   VPS        
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPS---LEHHA 415

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           ++ D   + G ++EA    + M +K   + W+ ++     H     A  + +K+   D+E
Sbjct: 416 ALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIF--DLE 473

Query: 416 PDGVAYLAVLS 426
           P  +    +LS
Sbjct: 474 PRSMGSHIILS 484


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/570 (35%), Positives = 331/570 (58%), Gaps = 13/570 (2%)

Query: 128 SVENGMQIHGMCMKSGFEWNP-VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           ++E G +IH   M SG    P  + N ++DMY KCG + EA R+FD M  K++ +W  ++
Sbjct: 56  ALEEGRRIHRW-MDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLM 114

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           AG+V +G   + + LF +M + GE+PD       + +CG+  ++  G +IH    + G  
Sbjct: 115 AGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMD 174

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +  V A ++++ Y KCG + EA  VF  + +K+VISWS++I  + Q E   EA+  F+
Sbjct: 175 SDL--VTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFK 232

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLK 364
            +++  +++D     S++  +     +E GK +H     V +GLDTS  V N++V+MY K
Sbjct: 233 LMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRI--VYAGLDTSIVVGNTLVNMYGK 290

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG  D+A ++F+ M  KNVV+W  ++  YG++G ++EA+ LF  M L+ V P+ + ++ +
Sbjct: 291 CGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTI 350

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L  CSHSG  +++  +F  +  D  + PR  H+ C++D LGR+G+L+EA+ LI++MPV  
Sbjct: 351 LYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPA 410

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
              +W +LL AC  H D +      E   + +      Y+M+SN++A    W+E  ++RK
Sbjct: 411 DAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRK 470

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
                G++K AGRSW+E+DK++H F  GD  HP   +I + L  +   M+ + G+    K
Sbjct: 471 RMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIK-GYEPDRK 529

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             +H ++EE K+E L  HSEKLA+   +     +  P   + + KNLRVC DCH  IK +
Sbjct: 530 VVIHSMEEEEKDEVLFYHSEKLAVAFGIA----STPPRTPLCIVKNLRVCSDCHSAIKFI 585

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           S +      VRD+ RFH F+ G CSCGDYW
Sbjct: 586 SGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 14/385 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C+    L+ G ++H  +          L+N L+DMY KCG +  A  VFD M  +NV
Sbjct: 48  IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNV 107

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SWT LM GF+Q+G     + LF +M      P+   L   I + G   ++  G +IH  
Sbjct: 108 FSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSA 167

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
               G + + V  N+II+MY KCG I EA  +F  MP K++I+W+ MIA +     +D+ 
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEA 227

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LL F+ MQ+ G   D  T+ S L A  S+G++  G  +H  ++ +G   S+  V+  +LV
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSI--VVGNTLV 285

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KCG   +AR VFD + +K+V+SW++++  Y Q     EA+ LF      S+ ++G 
Sbjct: 286 NMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALF-----DSMDLEGV 340

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS------NSIVDMYLKCGLIDEAT 372
             + +  V   +     GK   A +  V    D  ++        ++DM  + G ++EA 
Sbjct: 341 RPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAE 400

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKH 396
           EL   MPV  + V WT ++     H
Sbjct: 401 ELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 140/282 (49%), Gaps = 2/282 (0%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           + +R  L   +  C     L  G ++H A    G   DL+  N +I+MY KCG +  A A
Sbjct: 139 LPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFA 198

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           VF +M E+NV+SW+ ++  F QN  A   L  F  M    ++ +  T  + + A   + +
Sbjct: 199 VFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGA 258

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           +E G  +H   + +G + + VVGN++++MY KCG  ++A  +FD M  K++++WNAM+A 
Sbjct: 259 LELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAA 318

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y   G S + L LF  M   G  P++ TF + L  C   G        H   +   F  +
Sbjct: 319 YGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGIT 377

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLI 289
            + V  G L+D   + G L EA  +   +      + W+SL+
Sbjct: 378 PREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419


>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/570 (37%), Positives = 335/570 (58%), Gaps = 26/570 (4%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS--KCGRINEAARMFDVMPAKSLITWNA 184
           S++E   QIHG  +K+G   + +  + ++   +    G +  A  +FD +   +   WN 
Sbjct: 29  SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY  +   ++ LLL+  M  H    + +TF   LKAC S+ ++    QIH  +I  G
Sbjct: 89  MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F   + T    SL++ Y K G +  AR +FD ++Q+                   EA+ L
Sbjct: 149 FGSEIYTT--NSLLNVYSKSGDIKSARLLFDQVDQRDT-----------------EALNL 189

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F +++   +++D   L S +   AD  +++QGK IHAY  K    +D  +   ++DMY K
Sbjct: 190 FHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAK 249

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG ++EA E+F +M  K V  WT +I+GY  HG  +EA+  F KM    VEP+ + +  +
Sbjct: 250 CGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI 309

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L+ACSH+GLV E++  F  +      KP IEHY C+VD LGRAG L EA+ LIE+MPVKP
Sbjct: 310 LTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP 369

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           + AIW  LL+AC +HG+LELG+++G+IL+++D  +   Y+ +++IHA AG WN+  R+R+
Sbjct: 370 NAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRR 429

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
             + +G+ K+ G S + V+   H F  GD++HP  ++I  +L ++ +R++EE G+   + 
Sbjct: 430 QMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREE-GYKPKLG 488

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             L D++++ KE ++  HSEKLA+   L+    + +PG  IR+ KNLRVC DCH  IK +
Sbjct: 489 DLLLDLEDKEKETAIHHHSEKLAVTFGLI----STKPGMTIRIVKNLRVCEDCHTVIKLI 544

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK+     ++RD TRFH F+ G C+CGDYW
Sbjct: 545 SKVYAREILMRDRTRFHLFKDGNCTCGDYW 574



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 170/370 (45%), Gaps = 25/370 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+HG ++K G   D +  + L+   A    G +  A  VFD++   N   W  ++ G+  
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +   +  L L+  M   SV  N +T    +KA   +S++E   QIH   +K GF      
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYT 155

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            NS++++YSK G I  A  +FD +  +                   + L LF +MQ  G 
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQR-----------------DTEALNLFHRMQTAGI 198

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D     STL+AC  LG +  G  IH ++        +  ++   L+D Y KCG L EA
Sbjct: 199 KLDNVALVSTLQACADLGVLDQGKWIHAYI--KKHEIEIDPILGCVLIDMYAKCGDLEEA 256

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             VF  +E+K V  W+++I GYA      EA+E F +++   ++ +    + ++   +  
Sbjct: 257 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 316

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
            LV + K +     ++  G   S+ +   +VD+  + GL+ EA EL   MPVK N   W 
Sbjct: 317 GLVHEAKLLFESMERI-HGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWG 375

Query: 388 VIITGYGKHG 397
            ++     HG
Sbjct: 376 ALLNACHIHG 385



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 25/300 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L+   Q+H  ++KMGF  ++   N L+++Y+K G++  A  +FD++ +R+ 
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +                 L+LF +M ++ +K +   L + ++A   L  ++ G  IH  
Sbjct: 185 EA-----------------LNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAY 227

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K   E +P++G  +IDMY+KCG + EA  +F  M  K +  W AMI+GY + G   + 
Sbjct: 228 IKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREA 287

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-HGFLITSGFPYSVKTVIAGSL 257
           L  F KMQ  G  P++ TFT  L AC   G V     +        GF  S++    G +
Sbjct: 288 LEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY--GCM 345

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           VD   + G L EA  + + +  K   + W +L+       NL    EL +Q+ +  +QVD
Sbjct: 346 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNL----ELGKQIGKILIQVD 401



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 17/184 (9%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  +L+ C+   +LD G  +H  + K     D +L   LIDMYAKCG++  A  VF KM 
Sbjct: 205 LVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKME 264

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+ V  WTA++ G+  +G  +  L  F +M ++ V+PN+ T       +G+L++  +   
Sbjct: 265 EKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTF------TGILTACSHAGL 318

Query: 135 IH-------GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +H        M    GF+ +      ++D+  + G + EA  + + MP K     NA I 
Sbjct: 319 VHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP----NAAIW 374

Query: 188 GYVL 191
           G +L
Sbjct: 375 GALL 378


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/583 (35%), Positives = 333/583 (57%), Gaps = 12/583 (2%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           E  +S  + A     S+ N  +IH    KS    +  +G+ ++  Y+K G   +A ++FD
Sbjct: 39  EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVG 231
            MP K L++WN++I+G+    +    L  F  M+ E    P+E T  S + AC   G++ 
Sbjct: 99  DMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACN--GALD 154

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  IHGF I  G    VK  +A SL++ Y K G L  A R+F+ I   + +SW+S+I  
Sbjct: 155 AGKYIHGFGIKVGGTLEVK--VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAA 212

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
                   E ++ F ++R   ++ D   + +++       + +  + IH        G  
Sbjct: 213 QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK 272

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            +++ +++D Y K G +  +  +F E+   + V WT ++ GY  HGL +EA+ LF  M  
Sbjct: 273 ITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN 332

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             +EPD V +  +LSACSHSGLV E + YF+ +     ++PR++HYSC+VD LGR G L+
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLN 392

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A  +I++MP++P+  +W  LL ACRVHG++ELG+EV E L+ ++  +P NY+M+SN+++
Sbjct: 393 DAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYS 452

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
            + SW +  ++R L + +GLK+  G S +E   + H F+ GD +HP TEKI+  L E+  
Sbjct: 453 ASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLG 512

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++++  G+    +Y L D++EE KE+ +  HSEKLAI   L    L  + G+ + + KNL
Sbjct: 513 KIRKA-GYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGL----LVSKEGEALIITKNL 567

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+CGDCH   K +S I K   ++RD  RFH F  G CSC DYW
Sbjct: 568 RICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 2/266 (0%)

Query: 25  NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTAL 84
           N  LD G  +HG  +K+G + ++ + N LI+MY K G++  AC +F+ + + N VSW ++
Sbjct: 150 NGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           +   + NG A+  +  F +M    ++ +E T+   ++A   L   +    IHG+   +GF
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGF 269

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
                +  +++D Y+K GR++ +  +F  +     + W AM+AGY   G   + + LF  
Sbjct: 270 GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFES 329

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G  PD  TFT  L AC   G V  G      +++  +    +      +VD   +C
Sbjct: 330 MANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRC 388

Query: 265 GCLVEARRVF-DLIEQKSVISWSSLI 289
           G L +A  V  ++  + +   W +L+
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALL 414


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/661 (34%), Positives = 349/661 (52%), Gaps = 15/661 (2%)

Query: 40  KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLS 99
           K GF    ++   LI MY +CG ++ A   FD++ ER VVSW AL+  + +    +  L 
Sbjct: 138 KSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLR 197

Query: 100 LFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVEN-GMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +F +M    + PN  T+     A +G+ + +   G  IH   + SG      V NSII++
Sbjct: 198 VFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINL 257

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           + + G I  A  +F+ M  + + +WN MI+ +   G+S   L L+ +M      PD  TF
Sbjct: 258 FGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIR---PDGVTF 314

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            + L+AC     +  G  IH  +   G  Y    ++A +LV  Y +CG L  A  VF  I
Sbjct: 315 VNVLEACDCPDDLERGESIHRDVRAHG--YDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG- 336
           +   VI+ +++I  +AQ      ++  FRQ+ +  ++   F L +++G  A         
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 337 KQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           + +H + A+ P   D     V N++V+MY KCG +D A  +F+  P  NV TW  I+ GY
Sbjct: 433 RDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGY 492

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            +HG A  AV L  +M L  + PD +++ A LSA SH+  VE+    F  +  D  + P 
Sbjct: 493 AQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPS 552

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY  +VD LGRAG L+EA+  + SM +    A W  LL ACR+H D +      E ++
Sbjct: 553 VEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIV 612

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            +D  +  +Y ++SN+++ AG W+E E +R+     G +K  GRSW+EV   +H F   D
Sbjct: 613 AIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKD 672

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HP T +I++ L E+   +K E  +V  V   LHD+++E +E  L  HSEKLA+G  L+
Sbjct: 673 RSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLI 732

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
                 + G  I + KNLR+C DCH  +K  SK  K   VVRD  RFH F GG CSC D 
Sbjct: 733 ----GTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDC 788

Query: 694 W 694
           W
Sbjct: 789 W 789



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 239/489 (48%), Gaps = 14/489 (2%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D  R   ++  L+ G ++H  +++ G+   L L+N L+ MYA+      A  + D+M  R
Sbjct: 17  DLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRR 76

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N +SW A++    Q G+    L  F +M      P+     + IKA     +++ G  + 
Sbjct: 77  NALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAP---RTIQEGEIVQ 133

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
               KSGF+ + VVG ++I MY +CGR++ A   FD +  + +++WNA+I  Y      +
Sbjct: 134 EFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKE 193

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQIHGFLITSGFPYSVKTVIA 254
           + L +FR+M   G  P+  T      A   + +     G  IH   I SG   SV TV A
Sbjct: 194 QSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGL-ISVTTV-A 251

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S+++ + + G +  A  +F+ ++++ V SW+++I  +AQ  + + A++L+ ++   +++
Sbjct: 252 NSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM---TIR 308

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            DG    +++        +E+G+ IH          D  V+ ++V MY +CG +D A E+
Sbjct: 309 PDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEV 368

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +    V+T   II  + + G A  ++  FR+ML   + P     +AVL AC+ SG  
Sbjct: 369 FAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAA 428

Query: 435 EESQEYFSRL---CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             +     R    C        I   + +V+   + G LD A+ + ++ P + +++ W  
Sbjct: 429 ASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAP-QGNVSTWNA 487

Query: 492 LLSACRVHG 500
           +++    HG
Sbjct: 488 IMAGYAQHG 496



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 198/390 (50%), Gaps = 21/390 (5%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           +S+E G +IH   ++SG+  +  + N ++ MY++     +A  + D MP ++ ++WNA+I
Sbjct: 26  TSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVI 85

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
                AG   + LL F++M + G +PD   F S +KA  ++     G  +  F   SGF 
Sbjct: 86  RANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIVQEFAEKSGFD 142

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S   V+  +L+  Y +CG L  A+  FD I+++ V+SW++LI  Y++ +   +++ +FR
Sbjct: 143 RSF--VVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFR 200

Query: 307 QLRERSLQVDGFVLSSMMGVFADFA--LVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMY 362
           ++  + +  +   +  +    A  A  +   G  IH  +  + SGL   T+V+NSI++++
Sbjct: 201 EMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIH--SCSIDSGLISVTTVANSIINLF 258

Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
            + G I  A ++F +M  ++V +W  +I+ + ++G +  A+ L+ +M    + PDGV ++
Sbjct: 259 GRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFV 315

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
            VL AC     +E   E   R          +   + +V    R GRLD A  +  ++  
Sbjct: 316 NVLEACDCPDDLERG-ESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQ- 373

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            P +     +++A       + GR  G +L
Sbjct: 374 HPGVITLNAIIAA-----HAQFGRADGSLL 398



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 5/256 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G  +H  +   G+  DL++   L+ MY +CG ++ A  VF  +    V
Sbjct: 318 LEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGV 377

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHG 137
           ++  A++    Q G A   L  F QM    ++P++FTL   + A     +  +  + +H 
Sbjct: 378 ITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHR 437

Query: 138 MCMKSGFEWNP---VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
              +   + +P   +V N++++MY+KCG ++ A  +FD  P  ++ TWNA++AGY   GY
Sbjct: 438 WMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGY 497

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           ++  + L  +MQ  G  PD  +FT+ L A      V  G +I  + I+  +         
Sbjct: 498 ANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIF-YAISRDYGLIPSVEHY 556

Query: 255 GSLVDFYVKCGCLVEA 270
           G++VD   + G L EA
Sbjct: 557 GAVVDLLGRAGWLEEA 572


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/605 (34%), Positives = 346/605 (57%), Gaps = 9/605 (1%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G+  + L +F  +  ++ +P+  T +  + A   L  +  G  +      +G++ +  
Sbjct: 86  RRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V +S++ +Y++ G + +A ++FD MP +  +TW+ M+AG+V AG     + ++R+M+E G
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              DE      ++AC +  +V  G  +HG L+  G    V  V A SLVD Y K G L  
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV--VTATSLVDMYAKNGLLDV 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A RVF L+  ++ +SWS++I G+AQ     EA+ LFR ++   +Q D   L S +   ++
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ G+ +H +  +     +  +  + +DMY KCG +  A  LFN +  ++++ W  +
Sbjct: 323 IGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG  ++A+ LF++M    + PD   + ++LSA SHSGLVEE + +F  + N  +
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFK 441

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P  +HY C+VD L R+G ++EA +L+ SM  +P++AIW  LLS C  +  LELG  + 
Sbjct: 442 ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +L L  D+     ++SN++A    W++  ++RKL +  G KK+ G S +E+    H F
Sbjct: 502 DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAF 561

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              D +HP  E+I   + +++  M+ ++G++   ++  HD++EE KE+ L  HSEKLAI 
Sbjct: 562 LMEDQSHPQREEIVSKVAKLDLEMR-KMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIA 620

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN  PG  + + KNLRVCGDCH+ IK +SKI     VVRDA RFH F+ GVCS
Sbjct: 621 FGL----LNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCS 676

Query: 690 CGDYW 694
           C DYW
Sbjct: 677 CRDYW 681



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 214/415 (51%), Gaps = 15/415 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C++   L  G  +       G+  D+ + + L+ +YA+ G M  A  VFD+M  R+
Sbjct: 114 ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRD 173

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+ ++ GF+  G     + ++ +M    VK +E  +   I+A     +V  G  +HG
Sbjct: 174 RVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHG 233

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G   + V   S++DMY+K G ++ A R+F +M  ++ ++W+AMI+G+   G SD+
Sbjct: 234 HLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDE 293

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR MQ  G  PD     S L AC ++G +  G  +HGF++     +    ++  + 
Sbjct: 294 ALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR---FDFNCILGTAA 350

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L  A+ +F++I  + +I W+++I          +A+ LF+++ E  ++ D 
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 318 FVLSSMMGVFADFALVEQGK-----QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
              +S++   +   LVE+GK      ++ +  K+       V   +VD+  + GL++EA+
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGCMVNHF--KITPAEKHYV--CLVDLLARSGLVEEAS 466

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           +L   M  +  V  W  +++G   +   +    +   +L  +++PD V  LA++S
Sbjct: 467 DLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL--ELQPDDVGVLALVS 519


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 224/641 (34%), Positives = 347/641 (54%), Gaps = 43/641 (6%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQM 104
           +L   N L+   A    +     +F  M ER+ VS+ AL+ GF   G+    + L+   +
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 105 GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
              SV+P   TLS  I  +  LS    G  +H   ++ GF     VG+ ++DMY+K G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 165 NEAARMFDVMPAKSL-------------------------------ITWNAMIAGYVLAG 193
            +A R+F  M AK++                               ITW  M+ G    G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L +FR+M+  G   D++TF S L ACG+L ++  G QIH ++  + +  +V   +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV--FV 315

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KC  +  A  VF  +  +++ISW+++I+GY Q     EA+  F +++   +
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEA 371
           + D F L S++   A+ A +E+G Q H  A  + SGL    +VSN++V +Y KCG I++A
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLA--LVSGLMRYITVSNALVTLYGKCGSIEDA 433

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             LF+EM   + V+WT ++TGY + G AKE + LF KML + ++PDGV ++ VLSACS +
Sbjct: 434 HRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRA 493

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+  +YF  +  D  + P  +HY+C++D   R+GR  EA+  I+ MP  P    W T
Sbjct: 494 GLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWAT 553

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLS+CR+ G++E+G+   E LL  D  NP +YV++ ++HA  G W E   LR+  R + +
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQV 613

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G SW++   ++H F   D +HP + +I++ L  +  +M EE G+   V   LHD+ 
Sbjct: 614 KKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEE-GYKPDVSSVLHDVA 672

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
           +  K   +  HSEKLAI   L+     E P   IR+ KNLR
Sbjct: 673 DADKVHMISHHSEKLAIAFGLIFVP-QEMP---IRIVKNLR 709



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 223/510 (43%), Gaps = 103/510 (20%)

Query: 135 IHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT------------ 181
           +H + +K+  +  P  + N ++  Y+K GR+  A R+FD MP  +L T            
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 182 -------------------WNAMIAGYVLAGYSDKGLLLFRK-MQEHGEIPDEFTFTSTL 221
                              +NA+I G+   G   + + L+R  ++E    P   T ++ +
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
               +L     G  +H  ++  GF       +   LVD Y K G + +ARRVF  +E K+
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGF--GAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKT 211

Query: 282 V-------------------------------ISWSSLILGYAQEENLAEAMELFRQLRE 310
           V                               I+W++++ G  Q     EA+++FR++R 
Sbjct: 212 VVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRA 271

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             + +D +   S++      A +E+GKQIHAY  +     +  V +++VDMY KC  I  
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F  M  +N+++WT +I GYG++  ++EAV  F +M +D ++PD     +V+S+C++
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 431 SGLVEESQEYF-------------------------------SRLCNDKRMKPRIEHYSC 459
              +EE  ++                                 RL ++     ++  ++ 
Sbjct: 392 LASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTA 450

Query: 460 IVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           +V    + G+  E  +L E M    +KP    +  +LSAC   G +E G +  + + +  
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510

Query: 517 GDNPVN--YVMMSNIHADAGSWNECERLRK 544
           G  P++  Y  M ++++ +G + E E   K
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIK 540



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 119/215 (55%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L+ G Q+H  + +  +  ++ + + L+DMY+KC  +  A AVF +M  RN+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           +SWTA++ G+ QN  ++  +  F +M    +KP++FTL + I +   L+S+E G Q H +
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            + SG      V N+++ +Y KCG I +A R+FD M     ++W A++ GY   G + + 
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           + LF KM  +G  PD  TF   L AC   G V  G
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG 499



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   +  C+    L+ G Q H   +  G    + ++N L+ +Y KCG +  A  +FD+M 
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMS 441

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             + VSWTAL+ G+ Q G AK  + LF +M ++ +KP+  T    + A      VE G  
Sbjct: 442 FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCD 501

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
                M+      P+  +   +ID+YS+ GR  EA      MP +     W  +++   L
Sbjct: 502 YFD-SMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRL 560

Query: 192 AGYSDKG 198
            G  + G
Sbjct: 561 RGNMEIG 567


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/689 (33%), Positives = 362/689 (52%), Gaps = 31/689 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           L  CS    L  G  +H   V+ G     ++ + L+ MY +CG +  A A+F   LER  
Sbjct: 135 LSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGH-LERHL 193

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +VV W A++    QNG+ +  L +F +M    + P+  T  +  KA     S+    Q+ 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL-RASQVK 252

Query: 137 GM--CM-KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           G   C+ ++G   + VV  ++++ Y++CG I+ A   F  MP ++ ++W +MIA +   G
Sbjct: 253 GFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIG 312

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +    +  F  M   G +P   T  + L+ C  L +      +       G    V  V 
Sbjct: 313 HL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLHT---ARLVEAIAQEIGVATDVAIVT 368

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISW-----SSLILGYAQEENLAEAMELFRQL 308
              LV  Y +C    +A RVF   E+     W     +++I  YAQ  +     +L+   
Sbjct: 369 --DLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYAQCRDRRSTFKLWGAA 423

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHA-YAAKVPSGLDTSVSNSIVDMYLKCGL 367
            ER +  D  +  + +   A  A + +G+QIHA  AA      D ++ N+IV MY +CG 
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           + +A + F+ MP ++ ++W  +++   +HG  ++   LFR ML +  + + VA+L +LSA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSA 543

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C+H+GLVE   E+FS +  D  + P  EHY C+VD LGR GRL +A  ++++MPV P  A
Sbjct: 544 CAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAA 603

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W  L+ ACR++GD E GR   E +L L  ++   YV + NI++ AG W +   +RK+  
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMA 663

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK--EELGFVYGVKY 605
             GL+K+ G S +E+  ++H F   D +HP +E I+    E+E+ M   E  G+      
Sbjct: 664 DLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYA---ELERVMGAIERAGYRAVTGE 720

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHD++EE KE+ LR HSEKLAI      G ++   G  +RV KNLRVC DCH   K +S
Sbjct: 721 VLHDVEEEQKEQLLRFHSEKLAIAF----GMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K+     VVRD  RFH F+ G CSCGDYW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 225/466 (48%), Gaps = 18/466 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D  L + L+ MY +CG +  A  VF K+  +++V WT L+  ++  G++ A ++LF ++ 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              +  +     + + A      +  G  IH   +++G     +V ++++ MY +CG + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 166 EAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           +A  +F  +     ++ WNAMI      G   + L +F +M + G  PD  TF S  KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 225 GSLGSVGGGTQIHGF---LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
            S  S+   +Q+ GF   L  +G    V  V+A +LV+ Y +CG +  AR  F  + +++
Sbjct: 241 SSSPSL-RASQVKGFHTCLDETGLGSDV--VVATALVNAYARCGEIDCAREFFAAMPERN 297

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV--LSSMMGVFADFALVEQGKQI 339
            +SW+S+I  +AQ  +L  A+E F      ++ ++G V   S++         +   + +
Sbjct: 298 AVSWTSMIAAFAQIGHLL-AVETF-----HAMLLEGVVPTRSTLFAALEGCEDLHTARLV 351

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN--EMPVKNVVTWTVIITGYGKHG 397
            A A ++    D ++   +V  Y +C   ++A  +F+  E    +    T +I  Y +  
Sbjct: 352 EAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCR 411

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             +    L+   +   + PD + Y+  L AC+    + E ++  + +  D+R+   +   
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + IV   G+ G L +A++  + MP +  I+ W  +LSA   HG +E
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/665 (32%), Positives = 345/665 (51%), Gaps = 75/665 (11%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           + +F  M +  + P+   L T IK    LS+++ G Q+H   + SG   + VV +S++ M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 158 YSKCGRINEAARMFDVMPAK-----------------------------------SLITW 182
           Y +   + +A  +FD +P                                     +L++W
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N MI+G+  +G     +L+F+ M   G  PD  + +S L A G L     G QIH ++I 
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK---------------------- 280
            G        +  +L+D Y KC C  E   VF+ +++                       
Sbjct: 239 QGL--GPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296

Query: 281 -----------SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
                      +V+SW+S+I   +Q     EA+ELFR+++   ++ +   +  ++    +
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGN 356

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            A +  GK  H ++ +     D  V ++++DMY KCG +  +   F+ MP +N+V+W  +
Sbjct: 357 IAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSL 416

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           + GY  HG   EA+ +F  M     +PD V++  VLSAC+  GL EE   YF  +  +  
Sbjct: 417 MAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHG 476

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           ++ R+EHYSC+V  LGR+GRL+EA  +I+ MP +P   +W  LLS+CRVH  ++LG    
Sbjct: 477 VEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAA 536

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +  L+  NP NY+++SNI+A    W E + +R + RS+GLKK  G SW+E+  ++H  
Sbjct: 537 KRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHML 596

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
             GD +HP   +I + L ++   MK+  G+V    + L D++E+ KE+ L  HSEKLA+ 
Sbjct: 597 LAGDSSHPQMPQIIEKLAKLTVEMKKS-GYVPHTDFVLQDVEEQDKEQILCGHSEKLAVV 655

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           L L    LN +PG  ++V KNLR+C DCH  IK +S   K    VRD  RFH+F+GGVCS
Sbjct: 656 LGL----LNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCS 711

Query: 690 CGDYW 694
           CGDYW
Sbjct: 712 CGDYW 716



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 203/489 (41%), Gaps = 103/489 (21%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V + + L   ++ C+    L  G Q+H   +  G   D ++ + L+ MY +   +  A 
Sbjct: 70  IVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDAR 129

Query: 68  AVFDKML-----------------------------------ERNVVSWTALMCGFLQNG 92
            VFDK+                                    E N+VSW  ++ GF ++G
Sbjct: 130 NVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSG 189

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +    + +F  M    +KP+  ++S+ + A G L     G+QIH   +K G   +  V +
Sbjct: 190 SYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVS 249

Query: 153 SIIDMYSKCGRINEAARMF------DVMPAKSLIT------------------------- 181
           ++IDMY KC   +E + +F      DV    +L+T                         
Sbjct: 250 ALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNV 309

Query: 182 --WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
             W +MIA     G   + L LFR+MQ  G  P+  T    L ACG++ ++  G   H F
Sbjct: 310 VSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCF 369

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            + +G    V   +  +L+D Y KCG ++ +R  FD++  ++++SW+SL+ GYA      
Sbjct: 370 SLRNGIFNDV--YVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTF 427

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+ +F  ++    + D    + ++       L E+G              D+   N  V
Sbjct: 428 EAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFY----------FDSMSRNHGV 477

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           +  ++                     ++ ++T  G+ G  +EA  + ++M     EPD  
Sbjct: 478 EARME--------------------HYSCMVTLLGRSGRLEEAYAMIKQM---PFEPDSC 514

Query: 420 AYLAVLSAC 428
            + A+LS+C
Sbjct: 515 VWGALLSSC 523



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 3/208 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     L +G   H   ++ G   D+ + + LIDMYAKCG M  +   FD M  RN+
Sbjct: 351 LPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNL 410

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHG 137
           VSW +LM G+  +G     +++F  M     KP+  + +  + A       E G      
Sbjct: 411 VSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDS 470

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSD 196
           M    G E      + ++ +  + GR+ EA  M   MP       W A+++   +    D
Sbjct: 471 MSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVD 530

Query: 197 KGLLLFRKMQE-HGEIPDEFTFTSTLKA 223
            G +  +++ E     P  +   S + A
Sbjct: 531 LGEIAAKRVFELEPRNPGNYILLSNIYA 558


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/583 (35%), Positives = 333/583 (57%), Gaps = 12/583 (2%)

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
           E  +S  + A     S+ N  +IH    KS    +  +G+ ++  Y+K G   +A ++FD
Sbjct: 39  EAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ-EHGEIPDEFTFTSTLKACGSLGSVG 231
            MP K L++WN++I+G+    +    L  F  M+ E    P+E T  S + AC   G++ 
Sbjct: 99  DMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACS--GALD 154

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            G  IHGF I  G    VK  +A SL++ Y K G L  A R+F+ I   + +SW+S+I  
Sbjct: 155 AGKYIHGFGIKVGGTLEVK--VANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAA 212

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
                   E ++ F ++R   ++ D   + +++       + +  + IH        G  
Sbjct: 213 QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK 272

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
            +++ +++D Y K G +  +  +F E+   + V WT ++ GY  HGL +EA+ LF  M  
Sbjct: 273 ITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN 332

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             +EPD V +  +LSACSHSGLV E + YF+ +     ++PR++HYSC+VD LGR G L+
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLN 392

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
           +A  +I++MP++P+  +W  LL ACRVHG++ELG+EV E L+ ++  +P NY+M+SN+++
Sbjct: 393 DAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYS 452

Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
            + SW +  ++R L + +GLK+  G S +E   + H F+ GD +HP TEKI+  L E+  
Sbjct: 453 ASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLG 512

Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
           ++++  G+    +Y L D++EE KE+ +  HSEKLAI   L    L  + G+ + + KNL
Sbjct: 513 KIRKA-GYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGL----LVSKEGEALIITKNL 567

Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+CGDCH   K +S I K   ++RD  RFH F  G CSC DYW
Sbjct: 568 RICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 2/263 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD G  +HG  +K+G + ++ + N LI+MY K G++  AC +F+ + + N VSW +++  
Sbjct: 153 LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAA 212

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            + NG A+  +  F +M    ++ +E T+   ++A   L   +    IHG+   +GF   
Sbjct: 213 QVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK 272

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +  +++D Y+K GR++ +  +F  +     + W AM+AGY   G   + + LF  M  
Sbjct: 273 ITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN 332

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD  TFT  L AC   G V  G      +++  +    +      +VD   +CG L
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRCGLL 391

Query: 268 VEARRVF-DLIEQKSVISWSSLI 289
            +A  V  ++  + +   W +L+
Sbjct: 392 NDAYEVIQNMPMEPNAGVWGALL 414


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/605 (34%), Positives = 346/605 (57%), Gaps = 9/605 (1%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G+  + L +F  +  ++ +P+  T +  + A   L  +  G  +      +G++ +  
Sbjct: 86  RRGSPASALRVFRALPPAA-RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V +S++ +Y++ G + +A ++F  MP +  +TW+ M+AG+V AG     + ++R+M+E G
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              DE      ++AC +  +V  G  +HG L+  G    V  V A SLVD Y K G L  
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV--VTATSLVDMYAKNGLLDV 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A RVF L+  ++ +SWS++I G+AQ     EA+ LFR ++   +Q D   L S +   ++
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ G+ +H +  +     +  +  + +DMY KCG +  A  LFN +  ++++ W  +
Sbjct: 323 IGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG  ++A+ LF++M    + PD   + ++LSA SHSGLVEE + +F R+ N  +
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P  +HY C+VD L R+G ++EA +L+ SM  +P++AIW  LLS C  +  LELG  + 
Sbjct: 442 ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +L L  D+     ++SN++A    W++  ++RKL +  G KK+ G S +E+    H F
Sbjct: 502 DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              D +HP  E+I   + +++  M+ ++G++   ++  HD++EE KE+ L  HSE+LAI 
Sbjct: 562 VMEDQSHPQREEIVSKVAKLDLEMR-KMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIA 620

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN  PG  + + KNLRVCGDCH+ IK +SKI     VVRDA RFH F+ GVCS
Sbjct: 621 FGL----LNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCS 676

Query: 690 CGDYW 694
           C DYW
Sbjct: 677 CRDYW 681



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 213/414 (51%), Gaps = 13/414 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C++   L  G  +       G+  D+ + + L+ +YA+ G M  A  VF +M  R+
Sbjct: 114 ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRD 173

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+ ++ GF+  G     + ++ +M    VK +E  +   I+A     +V  G  +HG
Sbjct: 174 RVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHG 233

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G   + V   S++DMY+K G ++ A R+F +M  ++ ++W+AMI+G+   G SD+
Sbjct: 234 HLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDE 293

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR MQ  G  PD     S L AC ++G +  G  +HGF++     +    ++  + 
Sbjct: 294 ALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR---FDFNCILGTAA 350

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L  A+ +F++I  + +I W+++I          +A+ LF+++ E  ++ D 
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCGLIDEATE 373
              +S++   +   LVE+GK    +  ++ +    + +      +VD+  + GL++EA++
Sbjct: 411 ATFASLLSALSHSGLVEEGK---LWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASD 467

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L   M  +  V  W  +++G   +   +    +   +L  +++PD V  LA++S
Sbjct: 468 LLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL--ELQPDDVGVLALVS 519


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/537 (37%), Positives = 324/537 (60%), Gaps = 13/537 (2%)

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G ++ A ++FD M       WN ++ GYV  G  DK + ++ KM+  G  PD FTF   +
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           KAC  L  +  G  +HG ++  G  +     +   L+  YVK G L  A  +F  + ++ 
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFV--AAVRTELMIMYVKFGELGCAEFLFGSMVERD 200

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           +++W++LI    Q    ++A++ FR++    ++ D   + S +        +E G++I+ 
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE 260

Query: 342 YAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           +A +   G+D++  V N+ +DM  KCG +D+A  LF+EMP +NV++W+ +I GY  +G +
Sbjct: 261 FARE--EGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGES 318

Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC--NDKRMKPRIEHY 457
           ++A+ LF +M    V+P+ V +LAVLSACSH+G V E  +YF+ +   +DK ++PR EHY
Sbjct: 319 EKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHY 378

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
           +C+VD LGR+G L+EA N I+ MP++    IW  LL AC +H +++LG+ V ++L  L  
Sbjct: 379 ACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAP 438

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
           +    +V++SN++A AG W+  E++R+  + KG +KVA  S VE + EIH  YGGD +HP
Sbjct: 439 EIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHP 498

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
            +  I   L ++ K+MK  +G++       HD+++E KE +L  HSEKLAI  +L+ G  
Sbjct: 499 QSASILAKLEDLLKQMK-SMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLING-- 555

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
              P   IRV KNLR+CGDCH F K +S+I     ++RD  RFH F+ G+CSC D+W
Sbjct: 556 --SPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 187/373 (50%), Gaps = 14/373 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G+M+ A  +FD+M +     W  +M G+++NG     +S++ +M    V+P+ FT    I
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L+ +  G+ +HG  +K G E+   V   ++ MY K G +  A  +F  M  + L+
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WNA+IA  V  G+S K L  FR+M   G  PD  T  S L ACG LG +  G +I+ F 
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
              G   ++  ++  + +D   KCG + +A  +FD + Q++VISWS++I GYA      +
Sbjct: 263 REEGIDSNI--IVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEK 320

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS--- 357
           A+ LF +++ + +Q +     +++   +    V +G Q   + A+     D ++      
Sbjct: 321 ALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSD---DKNIQPRKEH 377

Query: 358 ---IVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
              +VD+  + G ++EA      MP++ +   W  ++     H   K  +G     LL +
Sbjct: 378 YACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIK--LGQHVADLLFE 435

Query: 414 VEPDGVAYLAVLS 426
           + P+  +Y  +LS
Sbjct: 436 LAPEIASYHVLLS 448



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 169/325 (52%), Gaps = 6/325 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++   L  G+ +HG +VK G  F   +  +L+ MY K GE+  A  +F  M+ER++
Sbjct: 142 IKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDL 201

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W AL+   +Q G +   L  F +MG + +KP+  T+ + + A G L  +E G +I+  
Sbjct: 202 VAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF 261

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             + G + N +V N+ +DM +KCG +++A  +FD MP +++I+W+ +I GY + G S+K 
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP-YSVKTVIAGSL 257
           L LF +M+  G  P+  TF + L AC   G V  G Q   F+  S       +      +
Sbjct: 322 LALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACM 381

Query: 258 VDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           VD   + G L EA     +  IE    I W +L+   A  +N+     +   L E + ++
Sbjct: 382 VDLLGRSGHLEEAYNFIKIMPIEADPGI-WGALLGACAIHQNIKLGQHVADLLFELAPEI 440

Query: 316 DGF--VLSSMMGVFADFALVEQGKQ 338
             +  +LS+M      +  VE+ +Q
Sbjct: 441 ASYHVLLSNMYAAAGRWHCVEKVRQ 465


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/622 (35%), Positives = 359/622 (57%), Gaps = 4/622 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
           +  +L  C        G ++H +++K    S +L + N LI MY +CG+M  A  +  +M
Sbjct: 250 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 309

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
              +VV+W +L+ G++QN   K  L  F  M ++  K +E ++++ I ASG LS++  GM
Sbjct: 310 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 369

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K G++ N  VGN++IDMYSKC       R F  M  K LI+W  +IAGY    
Sbjct: 370 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 429

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L LFR + +     DE    S L+A   L S+    +IH  ++  G    + TVI
Sbjct: 430 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVI 486

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              LVD Y KC  +  A RVF+ I+ K V+SW+S+I   A   N +EA+ELFR++ E  L
Sbjct: 487 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 546

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D   L  ++   A  + + +G++IH Y  +    L+ S++ ++VDMY  CG +  A  
Sbjct: 547 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 606

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ +  K ++ +T +I  YG HG  K AV LF KM  ++V PD +++LA+L ACSH+GL
Sbjct: 607 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 666

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++E + +   + ++  ++P  EHY C+VD LGRA  + EA   ++ M  +P+  +W  LL
Sbjct: 667 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 726

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
           +ACR H + E+G    + LL L+  NP N V++SN+ A+ G WN+ E++R   ++ G++K
Sbjct: 727 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEK 786

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             G SW+E+D ++H F   D +HP +++I++ L E+ ++++ E+G+V   K+ LH++ E 
Sbjct: 787 HPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEG 846

Query: 614 SKEESLRVHSEKLAIGLALVRG 635
            K + L  HSE++AI     R 
Sbjct: 847 EKVQMLHGHSERIAIAYGKERA 868



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 262/523 (50%), Gaps = 38/523 (7%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-N 77
           L+ C+K   +  G +LH  LVK+G+     + N L+ MYAK  +++ A  +FD   E+ +
Sbjct: 152 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 211

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V W +++  +  +G +   L LF +M  +   PN +T+ + + A    S  + G +IH 
Sbjct: 212 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 271

Query: 138 MCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
             +KS    + + V N++I MY++CG++ +A R+   M    ++TWN++I GYV      
Sbjct: 272 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 331

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L  F  M   G   DE + TS + A G L ++  G ++H ++I  G+  +++  +  +
Sbjct: 332 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ--VGNT 389

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KC       R F  +  K +ISW+++I GYAQ +   EA+ELFR + ++ +++D
Sbjct: 390 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 449

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
             +L S++   +    +   K+IH +  +    LDT + N +VD+Y KC  +  AT +F 
Sbjct: 450 EMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQNELVDVYGKCRNMGYATRVFE 508

Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
            +  K+VV+WT +I+    +G   EAV LFR+M+   +  D VA L +LSA +    + +
Sbjct: 509 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 568

Query: 437 SQEYFSRL---------------------CND----KRMKPRIE-----HYSCIVDSLGR 466
            +E    L                     C D    K +  RIE      Y+ ++++ G 
Sbjct: 569 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 628

Query: 467 AGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGR 506
            G    A  L + M    V P    +  LL AC   G L+ GR
Sbjct: 629 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 671



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 236/492 (47%), Gaps = 15/492 (3%)

Query: 36  GALVKMGFSFDLMLNNDLIDMYAK----CGEMNGACA--VFDKMLERNVVSWTALMCGFL 89
           G L +     D+  NN  ++ +A     CG+        VFD+M +R   +W  ++  ++
Sbjct: 62  GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYV 121

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            NG   + L+L+  M    V     +    +KA   L  + +G ++H + +K G+     
Sbjct: 122 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 181

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           + N+++ MY+K   ++ A R+FD    K   + WN++++ Y  +G S + L LFR+M   
Sbjct: 182 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 241

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ +T  S L AC        G +IH  ++ S   +S +  +  +L+  Y +CG + 
Sbjct: 242 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELYVCNALIAMYTRCGKMP 300

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +A R+   +    V++W+SLI GY Q     EA+E F  +     + D   ++S++    
Sbjct: 301 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 360

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
             + +  G ++HAY  K     +  V N+++DMY KC L       F  M  K++++WT 
Sbjct: 361 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 420

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I GY ++    EA+ LFR +    +E D +   ++L A S    +   +E    +    
Sbjct: 421 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 480

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LEL 504
            +   I++   +VD  G+   +  A  + ES+  K  ++ W +++S+  ++G+    +EL
Sbjct: 481 LLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEAVEL 537

Query: 505 GREVGEILLRLD 516
            R + E  L  D
Sbjct: 538 FRRMVETGLSAD 549


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/633 (33%), Positives = 356/633 (56%), Gaps = 50/633 (7%)

Query: 61  GEMNGACAVFDKMLE-RNVVSWTALMCGFLQNGNAKACLSLFCQ--MGSSSVKPNEFTLS 117
           G +  +  +F+  L   N+ ++ AL+  F Q+      +S F    +  ++  P+E+T +
Sbjct: 72  GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           + +KA   L+ V  G ++H    K G E N  V NS++D+Y K G    A ++FD M  +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
            +++WN +I+GY  +G  DK  ++F  M E   +                          
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLV-------------------------- 225

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
                     S  T+I+G     Y + G L EAR++F+ +  ++V+SW+++I GYAQ E 
Sbjct: 226 ----------SWSTMISG-----YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEK 270

Query: 298 LAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
            A+A+ELFRQ++ E  L  +   L S++   A    ++ GK IH +  +    +   + N
Sbjct: 271 YADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGN 330

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           ++ DMY KCG + EA  +F+EM  ++V++W++II G   +G A EA   F +M+ D +EP
Sbjct: 331 ALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP 390

Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
           + ++++ +L+AC+H+GLV++  EYF  +     + P+IEHY C+VD L RAGRLD+A++L
Sbjct: 391 NDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESL 450

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
           I SMP++P++ +W  LL  CR++ D E G  V   +L LD ++  + V ++N++A  G  
Sbjct: 451 INSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRL 510

Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           ++    R   R     K  G SW+E++  ++ F+ GD +HP + +I+ ++ E++ +MK  
Sbjct: 511 DDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVA 570

Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
            G+       +H+I EE KE++L  HSEKLA+   L+    N   G  IR+ KNLRVC D
Sbjct: 571 -GYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLI----NTSEGTTIRIVKNLRVCND 625

Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
           CH+ IK +SKI++   VVRD +RFH F+ G CS
Sbjct: 626 CHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 49/426 (11%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++H  + K G   +L + N L+D+Y K G    A  +FD+M+ R+VVSW  L+ G+  
Sbjct: 146 GQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGY-- 203

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
                 C                         SG++      M   GM  K+   W    
Sbjct: 204 ------CF------------------------SGMVDKAR--MVFDGMMEKNLVSW---- 227

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +++I  Y++ G + EA ++F+ MP +++++WNAMIAGY         + LFR+MQ  G 
Sbjct: 228 -STMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGG 286

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           + P++ T  S L AC  LG++  G  IH F+  +     V   +  +L D Y KCGC++E
Sbjct: 287 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKI--EVGLFLGNALADMYAKCGCVLE 344

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A+ VF  + ++ VISWS +I+G A      EA   F ++ E  L+ +      ++     
Sbjct: 345 AKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTH 404

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
             LV++G +      +V  G+   + +   +VD+  + G +D+A  L N MP++ NV+ W
Sbjct: 405 AGLVDKGLEYFDMMPQV-YGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVW 463

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
             ++ G   +  A+    +  ++L LD      + YLA + A    G ++++     R+ 
Sbjct: 464 GALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYAS--MGRLDDAASCRLRMR 521

Query: 446 NDKRMK 451
           ++K MK
Sbjct: 522 DNKSMK 527



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 19/294 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G  +H  + +      L L N L DMYAKCG +  A  VF +M 
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMH 353

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+V+SW+ ++ G    G A    + F +M    ++PN+ +    + A      V+ G++
Sbjct: 354 ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLE 413

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
              M M   +   P + +   ++D+ S+ GR+++A  + + MP + ++I W A++ G  +
Sbjct: 414 YFDM-MPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRI 472

Query: 192 AGYSDKG-LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              +++G  +++R ++          + + + A  S+G +         +  +    S+K
Sbjct: 473 YKDAERGERVVWRILELDSNHSGSLVYLANVYA--SMGRLDDAASCRLRMRDNK---SMK 527

Query: 251 TV------IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           T       I  S+ +F++      ++ R++ +I +   + W   + GY  + +L
Sbjct: 528 TPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRE---LKWKMKVAGYKPKTDL 578



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 140/298 (46%), Gaps = 16/298 (5%)

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD-LIEQKSV 282
           C +  S+    +I   +I S  P     +IA   +      G L  +  +F+  +   ++
Sbjct: 31  CATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNI 90

Query: 283 ISWSSLILGYAQEENLAEAMELFRQ--LRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            ++++L+  ++Q       +  F    +   +   D +  +S++   A  A V +G+++H
Sbjct: 91  FAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVH 150

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
            +  K     +  V NS+VD+Y K G    A +LF+EM V++VV+W  +I+GY   G+  
Sbjct: 151 CFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVD 210

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           +A  +F  M+    E + V++  ++S  +  G +EE+++ F  +     M+  +  ++ +
Sbjct: 211 KARMVFDGMM----EKNLVSWSTMISGYARVGNLEEARQLFENM----PMR-NVVSWNAM 261

Query: 461 VDSLGRAGRLDEAKNLIESMP----VKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           +    +  +  +A  L   M     + P+     ++LSAC   G L+LG+ +   + R
Sbjct: 262 IAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 319


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/571 (36%), Positives = 327/571 (57%), Gaps = 5/571 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +D G QLHG ++K G+   L+  N LI MY K G++  A  VF  +  ++++SW +++ G
Sbjct: 197 IDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITG 256

Query: 88  FLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           F Q G     L LF  M    V +PNEF   +   A   L   E G QI GMC K G   
Sbjct: 257 FTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGR 316

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N   G S+ DMY+K G +  A R F  + +  L++WNA+IA    +   ++ +  F +M 
Sbjct: 317 NVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMI 375

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G +PD+ TF + L ACGS  ++  G QIH ++I  G        +  SL+  Y KC  
Sbjct: 376 HMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGL--DKVAAVCNSLLTMYTKCSN 433

Query: 267 LVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           L +A  VF D+ E  +++SW++++   +Q +   EA  LF+ +     + D   +++++G
Sbjct: 434 LHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A+   +E G Q+H ++ K    +D SVSN ++DMY KCGL+  A  +F+     ++V+
Sbjct: 494 TCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVS 553

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+ +I GY + GL +EA+ LFR M    V+P+ V YL VLSACSH GLVEE    ++ + 
Sbjct: 554 WSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTME 613

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            +  + P  EH SC+VD L RAG L EA+N I+     P I +W+TLL++C+ HG++++ 
Sbjct: 614 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIA 673

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
               E +L+LD  N    V++SNIHA AG+W E  RLR L +  G++KV G+SW+EV  +
Sbjct: 674 ERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQ 733

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           IH F+  D +HP    I+ +L ++  +M ++
Sbjct: 734 IHVFFSEDSSHPQRGNIYTMLEDLWLQMLDD 764



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 254/511 (49%), Gaps = 26/511 (5%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+  E     + +  C+    L YG ++H  ++K     DL+L N +++MY KCG +  A
Sbjct: 75  SIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDA 134

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
              FD M  R+VVSWT ++ G+ QNG     + ++ QM  S   P++ T  + IKA  + 
Sbjct: 135 RKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIA 194

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
             ++ G Q+HG  +KSG++ + +  N++I MY+K G+I  A+ +F ++  K LI+W +MI
Sbjct: 195 GDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMI 254

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            G+   GY  + L LFR M   G   P+EF F S   AC SL     G QI G     G 
Sbjct: 255 TGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGL 314

Query: 246 PYSVKTVIAG-SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               + V AG SL D Y K G L  A+R F  IE   ++SW+++I   A  + + EA+  
Sbjct: 315 G---RNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYF 370

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMY 362
           F Q+    L  D     +++        + QG QIH+Y  K+  GLD   +V NS++ MY
Sbjct: 371 FCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKM--GLDKVAAVCNSLLTMY 428

Query: 363 LKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
            KC  + +A  +F ++    N+V+W  I++   +H    EA  LF+ ML  + +PD +  
Sbjct: 429 TKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITI 488

Query: 422 LAVLSACSHSGLVEESQEYF-----SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
             +L  C+    +E   +       S L  D  +  R      ++D   + G L  A+ +
Sbjct: 489 TTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNR------LIDMYAKCGLLKHARYV 542

Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            +S    P I  W +L+     +    LG+E
Sbjct: 543 FDSTQ-NPDIVSWSSLIVG---YAQFGLGQE 569



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 212/430 (49%), Gaps = 15/430 (3%)

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E +  S+  LMC   Q    +A  +    + +SS++    T    I A   + S++ G +
Sbjct: 44  ELSTNSYINLMCK--QQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKR 101

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +KS  + + V+ N I++MY KCG + +A + FD M  +S+++W  MI+GY   G 
Sbjct: 102 IHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQ 161

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            +  ++++ +M   G  PD+ TF S +KAC   G +  G Q+HG +I SG+ + +  +  
Sbjct: 162 ENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHL--IAQ 219

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSL 313
            +L+  Y K G +  A  VF +I  K +ISW+S+I G+ Q     EA+ LFR + R+   
Sbjct: 220 NALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVY 279

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           Q + F+  S+          E G+QI    AK   G +     S+ DMY K G +  A  
Sbjct: 280 QPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKR 339

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            F ++   ++V+W  II       +  EA+  F +M+   + PD + +L +L AC     
Sbjct: 340 AFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMT 398

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIW 489
           + +  +  S +     +K  ++  + + +SL     +   L +A N+ + +    ++  W
Sbjct: 399 LNQGMQIHSYI-----IKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSW 453

Query: 490 QTLLSACRVH 499
             +LSAC  H
Sbjct: 454 NAILSACSQH 463



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 2/171 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++ + L+ G Q+H   VK G   D+ ++N LIDMYAKCG +  A  VFD     ++
Sbjct: 492 LGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDI 551

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG- 137
           VSW++L+ G+ Q G  +  L+LF  M +  V+PNE T    + A   +  VE G  ++  
Sbjct: 552 VSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNT 611

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIA 187
           M ++ G        + ++D+ ++ G + EA            IT W  ++A
Sbjct: 612 MEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLA 662


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/599 (36%), Positives = 333/599 (55%), Gaps = 15/599 (2%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +SL+  M  S   P+ F+    +K+   LS   +G Q+H    K G E  P V  ++I M
Sbjct: 38  ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97

Query: 158 YSKCGRINEAARMFDVMPAKSLIT--WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
           Y KCG + +A ++F+  P  S ++  +NA+I+GY           +FR+M+E G   D  
Sbjct: 98  YCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSV 157

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T    +  C     +  G  +HG  +  G    V   +  S +  Y+KCG +   RR+FD
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV--AVLNSFITMYMKCGSVEAGRRLFD 215

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +  K +I+W+++I GY+Q     + +EL+ Q++   +  D F L S++   A     + 
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G ++           +  VSN+ + MY +CG + +A  +F+ MPVK++V+WT +I  YG 
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG+ +  + LF  M+   + PDG  ++ VLSACSHSGL ++  E F  +  + +++P  E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HYSC+VD LGRAGRLDEA   IESMPV+P  A+W  LL AC++H ++++       ++  
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
           + +N   YV+MSNI++D+ +     R+R + R +  +K  G S+VE    +H F  GD +
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRS 515

Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
           H  TE++H++L E+E  + E  G        +   + E    + R HSE+LAI      G
Sbjct: 516 HEQTEEVHRMLDELETSVMELAG-------NMDCDRGEEVSSTTREHSERLAIAF----G 564

Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            LN  PG  I V KNLRVC DCH F+K +SKI+   FVVRDA+RFH F+ GVCSC DYW
Sbjct: 565 ILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 204/413 (49%), Gaps = 10/413 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+   L   G QLH  + K G   +  +   LI MY KCG +  A  VF++  + + 
Sbjct: 60  LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119

Query: 79  VS--WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +S  + AL+ G+  N        +F +M  + V  +  T+   +    V   +  G  +H
Sbjct: 120 LSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G C+K G +    V NS I MY KCG +    R+FD MP K LITWNA+I+GY   G + 
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L L+ +M+  G  PD FT  S L +C  LG+   G ++   + ++GF  +V   ++ +
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV--FVSNA 297

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            +  Y +CG L +AR VFD++  KS++SW+++I  Y         + LF  + +R ++ D
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
           G V   ++   +   L ++G ++   A K    L+    +   +VD+  + G +DEA E 
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416

Query: 375 FNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              MPV+ +   W  ++     H     A   F K++  + EP+ + Y  ++S
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI--EFEPNNIGYYVLMS 467



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 167/328 (50%), Gaps = 10/328 (3%)

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN  +          + + L+R M   G  PD F+F   LK+C SL     G Q+H  + 
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS--WSSLILGYAQEENLA 299
             G     +  +  +L+  Y KCG + +AR+VF+   Q S +S  +++LI GY     + 
Sbjct: 81  KGGC--ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NS 357
           +A  +FR+++E  + VD   +  ++ +      +  G+ +H    K   GLD+ V+  NS
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK--GGLDSEVAVLNS 196

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
            + MY+KCG ++    LF+EMPVK ++TW  +I+GY ++GLA + + L+ +M    V PD
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
               ++VLS+C+H G  +   E   +L       P +   +  +    R G L +A+ + 
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELG 505
           + MPVK S+  W  ++    +HG  E+G
Sbjct: 316 DIMPVK-SLVSWTAMIGCYGMHGMGEIG 342


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/660 (33%), Positives = 352/660 (53%), Gaps = 55/660 (8%)

Query: 36  GALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAK 95
            AL  + F   ++    L+  Y + G +  A  +F +M ERN VS+T L+ G L  G   
Sbjct: 101 AALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVN 160

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
               LF +M    V      LS   +A  +    E       M  ++   W      ++I
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRI---TEARALFDEMPKRNVVSWT-----AMI 212

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
             Y++ G +N A ++F+VMP ++ ++W AM+ GY+ AG+ +    LF  M EH       
Sbjct: 213 SGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH------- 265

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
                + AC ++  VG G +                             G +  A+ VF+
Sbjct: 266 ----PVAACNAM-MVGFGQR-----------------------------GMVDAAKTVFE 291

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            + ++   +WS++I  Y Q E L EA+  FR++  R ++ +   + S++ V A  A+++ 
Sbjct: 292 KMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDY 351

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+++HA   +    +D    ++++ MY+KCG +D+A  +F+    K++V W  +ITGY +
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQ 411

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HGL ++A+G+F  M L  + PDG+ Y+  L+ACS++G V+E +E F+ +  +  ++P  E
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAE 471

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HYSC+VD LGR+G ++EA +LI++MPV+P   IW  L+ ACR+H + E+     + LL L
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLEL 531

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD- 574
           +  N   YV++S+I+   G W +  ++RK   S+ L K  G SW+E DK +H F  GD  
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVL 591

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
            HP    I ++L +++  + E  G+     + LHDI EE K  SLR HSE+ A+   L  
Sbjct: 592 AHPEHAAILRILEKLDGLLMES-GYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGL-- 648

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             L    G  IRV KNLRVCGDCH  IK ++KI     V+RDA RFH F+ G CSC DYW
Sbjct: 649 --LKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 191/437 (43%), Gaps = 83/437 (18%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-- 209
           N+ I   ++ G I  A   F+ MP ++  ++NA++AGY      D  L LFR+M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 210 --------------EIPDEFTFTSTL---KACGSLGSVGGGTQIHGFL-----ITSGFP- 246
                          +PD     +++    +  S  S+  G   HG L     +    P 
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 247 --YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +   TV+ G L+D     G + EARR+FD +  + V++W++++ GY Q   + EA  L
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++ +R++       ++M+  +A    V   +++      +P   + S +  +V  Y++
Sbjct: 197 FDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEV---MPERNEVSWTAMLVG-YIQ 248

Query: 365 CGLIDEATELFNEMPVKNVV-------------------------------TWTVIITGY 393
            G +++A ELFN MP   V                                TW+ +I  Y
Sbjct: 249 AGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAY 308

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL--CNDKRMK 451
            ++    EA+  FR+ML   V P+  + +++L+ C+   +++  +E  + +  C+     
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCS---FD 365

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             +   S ++    + G LD+AK +  +   K  I +W ++++    HG   LG +   I
Sbjct: 366 MDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG---LGEQALGI 421

Query: 512 L--LRLDGDNP--VNYV 524
              +RL G +P  + Y+
Sbjct: 422 FHDMRLAGMSPDGITYI 438



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   +LDYG ++H A+++  F  D+   + LI MY KCG ++ A  VF     +++
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V W +++ G+ Q+G  +  L +F  M  + + P+  T    + A      V+ G +I + 
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M + S         + ++D+  + G + EA  +   MP +   + W A++  
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 221/621 (35%), Positives = 352/621 (56%), Gaps = 10/621 (1%)

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN-GMQI 135
            VVS+TA + G  Q+      LS F  M    ++PN+FT  +  KA+         G Q+
Sbjct: 83  TVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQL 142

Query: 136 HGMCMKSGF-EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           H + ++ G+   +  V  + +DMY K G +  A R+FD MP ++++ WNA++   VL G 
Sbjct: 143 HALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGR 202

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + +  +  ++  G +P+  +  +   AC  + ++  G Q +GF+   GF   V   ++
Sbjct: 203 PLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS--VS 260

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S+VDFY KC C+ +AR VFD +  ++ +SW S+++ YAQ     EA  ++   R    +
Sbjct: 261 NSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEE 320

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              F++SS++   A    ++ G+ +HA A +     +  V++++VDMY KCG I++A ++
Sbjct: 321 PTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQV 380

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL-DDVEPDGVAYLAVLSACSHSGL 433
           F EMP +N+VTW  +I GY   G A  A+ +F KM++  +  P+ +  + VL+ACS  GL
Sbjct: 381 FFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGL 440

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
            +E  E F  +     ++PRIEHY+C+VD L RAG  + A  +I+ MP++PSI++W  LL
Sbjct: 441 TKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALL 500

Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
             C++HG  ELGR   E L  LD  +  N+V++SN+ A AG W E   +RK  ++ G+KK
Sbjct: 501 GGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKK 560

Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
             GRSW+     +H F   D TH +  +I  +L +++ +M+   G++   +YAL+D++EE
Sbjct: 561 DPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAA-GYMPDTQYALYDLEEE 619

Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFV 673
            KE  +  HSEKLA+   L+       PG  IR+ KNLR+C DCH   K +S I     +
Sbjct: 620 EKESEVFQHSEKLALAFGLI----CIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREII 675

Query: 674 VRDATRFHRFEGGVCSCGDYW 694
           VRD   FH F+   CSC DYW
Sbjct: 676 VRDNNMFHHFKNYECSCKDYW 696



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 194/391 (49%), Gaps = 10/391 (2%)

Query: 31  GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G QLH   ++ G+   D  ++   +DMY K G +  A  +FD+M  RNVV+W A+M   +
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAV 198

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            +G     +  +  +  +   PN  ++     A   ++++  G Q +G   K GF  +  
Sbjct: 199 LDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS++D Y KC  + +A  +FD M  ++ ++W +M+  Y   G  ++   ++   +  G
Sbjct: 259 VSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAG 318

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E P +F  +S L  C  L  +  G  +H   + S    ++   +A +LVD Y KCG + +
Sbjct: 319 EEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNI--FVASALVDMYGKCGGIED 376

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFA 328
           A +VF  + Q+++++W+++I GYA   +   A+ +F + +  +    +   L +++   +
Sbjct: 377 AEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACS 436

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
              L ++G ++     K   G++  + +   +VD+  + G+ + A ++   MP++ ++  
Sbjct: 437 RGGLTKEGYELFQ-TMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISV 495

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           W  ++ G   HG  K  +G      L +++P
Sbjct: 496 WGALLGGCKMHG--KTELGRIAAEKLFELDP 524



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 7/274 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+    L  G Q +G + K GF  D+ ++N ++D Y KC  +  A AVFD M  RN VSW
Sbjct: 232 CAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSW 291

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            +++  + QNG  +    ++     +  +P +F +S+ +     L  ++ G  +H + ++
Sbjct: 292 CSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVR 351

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S  + N  V ++++DMY KCG I +A ++F  MP ++L+TWNAMI GY   G +   L +
Sbjct: 352 SCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSV 411

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLV 258
           F KM    E  P+  T  + L AC   G    G ++     T  + + ++  I     +V
Sbjct: 412 FDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYEL---FQTMKWRFGIEPRIEHYACVV 468

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILG 291
           D   + G    A ++   +  +  IS W +L+ G
Sbjct: 469 DLLCRAGMEERAYKIIQGMPMRPSISVWGALLGG 502



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 177/388 (45%), Gaps = 15/388 (3%)

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P +   ++++YSK      AA      P+ +++++ A I+G        + L  F  M  
Sbjct: 53  PFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLR 112

Query: 208 HGEIPDEFTFTSTLK-ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
            G  P++FTF S  K A  +      GTQ+H   +  G+       ++ + +D Y K GC
Sbjct: 113 LGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGY-LPDDAFVSCAALDMYFKTGC 171

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L  ARR+FD +  ++V++W++++     +    E +E +  LR      +   + +    
Sbjct: 172 LALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNA 231

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            A    +  G+Q + + AK   G D SVSNS+VD Y KC  + +A  +F+ M V+N V+W
Sbjct: 232 CAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSW 291

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV-----EESQEYF 441
             ++  Y ++G  +EA  ++        EP      +VL+ C  +GL+            
Sbjct: 292 CSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTC--AGLLGLDLGRALHAVA 349

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
            R C D      I   S +VD  G+ G +++A+ +   MP + ++  W  ++      GD
Sbjct: 350 VRSCIDS----NIFVASALVDMYGKCGGIEDAEQVFFEMPQR-NLVTWNAMIGGYAHIGD 404

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNI 529
                 V + ++      P NY+ + N+
Sbjct: 405 AHNALSVFDKMIMGQETAP-NYITLVNV 431



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+  L LD G  LH   V+     ++ + + L+DMY KCG +  A  VF +M +RN+
Sbjct: 330 LTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNL 389

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W A++ G+   G+A   LS+F +M       PN  TL   + A       + G ++  
Sbjct: 390 VTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELF- 448

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGY 194
             MK  F   P + +   ++D+  + G    A ++   MP + S+  W A++ G  + G 
Sbjct: 449 QTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508

Query: 195 SDKGLLLFRKMQE 207
           ++ G +   K+ E
Sbjct: 509 TELGRIAAEKLFE 521


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/689 (33%), Positives = 363/689 (52%), Gaps = 31/689 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           L  CS    L  G  +H   V+ G     ++ + L+ MY +CG +  A A+F   LER  
Sbjct: 135 LSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGH-LERHL 193

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +VV W A++    QNG+ +  L +F +M    + P+  T  +  KA     S+    Q+ 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSL-RASQVK 252

Query: 137 GM--CM-KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           G   C+ ++G   + VV  ++++ Y++CG I+ A + F  MP ++ ++W +MIA +   G
Sbjct: 253 GFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIG 312

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +    +  F  M   G +P   T  + L+ C  L  V    +     I           I
Sbjct: 313 HL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDL-RVARLVEA----IAQEIGVVTDVAI 366

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISW-----SSLILGYAQEENLAEAMELFRQL 308
              LV  Y +C    +A RVF   E+     W     +++I  YAQ  +     +L+   
Sbjct: 367 VTDLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYAQCRDRRSTFKLWGAA 423

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHA-YAAKVPSGLDTSVSNSIVDMYLKCGL 367
            ER +  D  +  + +   A  A + +G+QIHA  AA      D ++ N+IV MY +CG 
Sbjct: 424 IERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGS 483

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           + +A + F+ MP ++ ++W  +++   +HG  ++   LFR ML +  + + +A+L +LSA
Sbjct: 484 LRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSA 543

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C+H+GLV+   E+FS +  D  + P  EHY C+VD LGR GRL +A  ++++MPV P  A
Sbjct: 544 CAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAA 603

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W  L+ ACR++GD E GR   E +L L  D+   YV + NI++ AG W++   +RK+  
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMA 663

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK--EELGFVYGVKY 605
             GL+K+ G S +E+  ++H F   D +HP +E I+    E+E+ M   E  G+      
Sbjct: 664 DLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYA---ELERVMGAIERAGYRAVTGE 720

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            LHD++EE KE+ LR HSEKLAI      G ++   G  +RV KNLRVC DCH   K +S
Sbjct: 721 VLHDVEEEQKEQLLRFHSEKLAIAF----GMMSTPQGSTLRVIKNLRVCVDCHNASKFIS 776

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K+     VVRD  RFH F+ G CSCGDYW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 225/466 (48%), Gaps = 18/466 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D  L + L+ MY +CG +  A  VF K+  +++V WT L+  ++  G++ A ++LF ++ 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              +  +     + + A      +  G  IH   +++G     +V ++++ MY +CG + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 166 EAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
           +A  +F  +     ++ WNAMI      G   + L +F +M + G  PD  TF S  KAC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 225 GSLGSVGGGTQIHGF---LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
            S  S+   +Q+ GF   L  +G    V  V+A +LV+ Y +CG +  AR+ F  + +++
Sbjct: 241 SSSPSL-RASQVKGFHACLDETGLGSDV--VVATALVNAYARCGEIDCARKFFAEMPERN 297

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV--LSSMMGVFADFALVEQGKQI 339
            +SW+S+I  + Q  +L  A+E F      ++ ++G V   S++         +   + +
Sbjct: 298 AVSWTSMIAAFTQIGHLL-AVETF-----HAMLLEGVVPTRSTLFAALEGCEDLRVARLV 351

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN--EMPVKNVVTWTVIITGYGKHG 397
            A A ++    D ++   +V  Y +C   ++A  +F+  E    +    T +I  Y +  
Sbjct: 352 EAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCR 411

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             +    L+   +   + PD + Y+  L AC+    + E ++  + +  D+R+   +   
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + IV   G+ G L +A++  + MP +  I+ W  +LSA   HG +E
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNAMLSASAQHGRVE 516



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 12/293 (4%)

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +A SLV  Y++CG L  A  VF  I  KS++ W+ LI  Y    + A A+ LF ++ +  
Sbjct: 64  LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           + +D  V  S++   +    +  G+ IH  A +   GL   V++++V MY +CG + +A 
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183

Query: 373 ELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            LF  +    +VV W  +IT   ++G  +EA+ +F +ML   + PD V +++V  ACS S
Sbjct: 184 ALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSS 243

Query: 432 GLVEESQEYFSRLCNDKR-MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
             +  SQ      C D+  +   +   + +V++  R G +D A+     MP + +++ W 
Sbjct: 244 PSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVS-WT 302

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           ++++A    G L L  E    +L L+G  P    + + +         CE LR
Sbjct: 303 SMIAAFTQIGHL-LAVETFHAML-LEGVVPTRSTLFAALEG-------CEDLR 346


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/678 (34%), Positives = 381/678 (56%), Gaps = 25/678 (3%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G  +HG   K G+     + N L+DMYAKCGE+  A   F +    +VVSW  ++  +
Sbjct: 187 ETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEA--PSVVSWNVMLGAY 244

Query: 89  LQNGNAKACLSLFCQMG---SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            +N  A A   L   M      SV  +E T+ + + A    + +    ++H   ++ G +
Sbjct: 245 TRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLD 304

Query: 146 W-NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
             +  V N+++  Y +CGR+  A R+F  +  K++ +WN +I+ +     +    L  + 
Sbjct: 305 AASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTAAAIELFIQM 364

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
               G  PD F+  S L AC     +      HGF++ +G      TVI  SL+  Y++C
Sbjct: 365 TNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGL--ERDTVIRASLLSAYIRC 422

Query: 265 G-CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF---VL 320
                 AR +FD +E+K  + W ++I GY+Q     E+++LFR+++     V+G    V+
Sbjct: 423 SRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQ----SVEGHCSSVI 478

Query: 321 SSMMGVFA--DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           S+   + A  + + V  GK++H +A K     D  +S+S++DMY KCG +++A   F+ +
Sbjct: 479 SATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRL 538

Query: 379 PVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
             ++  V+WT +ITGY  +GL +EAV L+ KM  + +EPD   YL +L AC H+G++EE 
Sbjct: 539 KARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEG 598

Query: 438 QEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
             +F  + N   +++ ++EHYSC++  L RAGR  +A  L+  MP +P   I  ++LSAC
Sbjct: 599 LRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSAC 658

Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
            +HG+ ELG +V E LL L+ D   +YV+ SN++A +  W++  ++RK+ R  G+ K  G
Sbjct: 659 HIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPG 718

Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
            SW++V  +++ F  G++ HP  E++  +   +E+R++ E+G+V      LH+++EE K 
Sbjct: 719 CSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERIR-EIGYVPDTTVVLHELEEEEKV 777

Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
           E+L  HSEK A+   L+R      P  V RVFKN+R+C DCH   + +SK+     VVRD
Sbjct: 778 EALWWHSEKQAVTFGLLR---TATPATV-RVFKNIRMCKDCHNAARLISKVTGRDIVVRD 833

Query: 677 ATRFHRFEGGVCSCGDYW 694
             RFH F GG+CSCGDYW
Sbjct: 834 KKRFHHFRGGICSCGDYW 851



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/515 (31%), Positives = 256/515 (49%), Gaps = 37/515 (7%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--RNVVSWTALMCGF 88
           G Q+H    K+G   D  + N L+ MY +CG +  A  VF  + +  RN+VSW ALM   
Sbjct: 87  GRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL 146

Query: 89  LQNGNAKACLSLF--CQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
             +G+ +  L LF  C +    +  +E TL T +     L   E G  +HG+  KSG++ 
Sbjct: 147 --SGDPRRGLELFRDCLVAVGGMV-DEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDA 203

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              VGN+++DMY+KCG + +A R F   P  S+++WN M+  Y     +     L R MQ
Sbjct: 204 PARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQ 261

Query: 207 --EHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
             EHG +P DE T  S L AC     +    ++H F +  G   +   V   +LV  Y +
Sbjct: 262 IKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKV-PNALVAAYGR 320

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSS 322
           CG L+ A RVF  I +K+V SW++LI  +AQ +N A A+ELF Q+     L+ DGF + S
Sbjct: 321 CGRLLHADRVFTDIRRKTVSSWNTLISAHAQ-QNTAAAIELFIQMTNACGLKPDGFSIGS 379

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE-ATELFNEMPVK 381
           ++   AD   +   K  H +  +     DT +  S++  Y++C   +  A  LF+ M  K
Sbjct: 380 LLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEK 439

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE---PDGVAYLAVLSACSHSGLVEESQ 438
             V W  +I+GY ++GL  E++ LFR+M    VE      ++  + L ACS    V   +
Sbjct: 440 GEVLWIAMISGYSQNGLPGESLQLFREM--QSVEGHCSSVISATSALMACSELSSVRLGK 497

Query: 439 EYF-----SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           E       + LC+D  +       S ++D   + G +++A+   + +  + +   W  ++
Sbjct: 498 EMHCFALKADLCDDPFLS------SSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMI 551

Query: 494 SACRVHGDLELGREVGEIL--LRLDGDNPVNYVMM 526
           +   V+G   LGRE  E+   +R +G  P  +  +
Sbjct: 552 TGYAVNG---LGREAVELYGKMRREGMEPDEFTYL 583



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 152/325 (46%), Gaps = 17/325 (5%)

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGE--IPDEFTFTSTLKACGSL--GSVGGGTQI 236
            WNA++A +  AG     L L   +    E   PD FT     ++CG L  G+   G Q+
Sbjct: 31  QWNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQV 90

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILGYAQ 294
           H      G P      +  SLV  Y +CG + +A +VF  I    ++++SW++L+   + 
Sbjct: 91  HALAAKLGLPGD--PFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSG 148

Query: 295 EENLAEAMELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS 353
           +      +ELFR  L      VD   L +++ + A     E G+ +H  AAK        
Sbjct: 149 DPR--RGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPAR 206

Query: 354 VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
           V N++VDMY KCG + +A   F E P  +VV+W V++  Y ++  A  A GL R M + +
Sbjct: 207 VGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKE 264

Query: 414 ---VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
              V  D +  L+VL ACS    +   +E  +            +  + +V + GR GRL
Sbjct: 265 HGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRL 324

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSA 495
             A  +   +  K +++ W TL+SA
Sbjct: 325 LHADRVFTDIRRK-TVSSWNTLISA 348



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 11/165 (6%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  CS+   +  G ++H   +K     D  L++ LIDMY+KCG +  A   FD++  R+
Sbjct: 483 ALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARD 542

Query: 78  V-VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG---- 132
             VSWTA++ G+  NG  +  + L+ +M    ++P+EFT    + A G    +E G    
Sbjct: 543 AKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFF 602

Query: 133 --MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
             M+ H   ++   E      + +I M S+ GR  +A  +   MP
Sbjct: 603 DEMRNHHHKIEVKLEHY----SCVIGMLSRAGRFADAVALMAEMP 643


>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
          Length = 686

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/600 (35%), Positives = 334/600 (55%), Gaps = 54/600 (9%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++     +H   +K G      + N+++++Y KCG  + A ++FD MP +  I W +++ 
Sbjct: 86  TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 145

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
               A  S K L +F  +     + PD+F F++ +KAC +LGS+  G Q+H   I S   
Sbjct: 146 ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS--E 203

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
           Y+   V+  SLVD Y KCG L  A+ VFD I  K+ ISW++++ GYA+     EA+ELFR
Sbjct: 204 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 263

Query: 307 QL--------------------------------RERSLQVDGFVLSSMMGVFADFALVE 334
            L                                RER   +D  VLSS++G  A+ A   
Sbjct: 264 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 323

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
            G+Q+H               N+++DMY KC  +  A ++F+ M  ++VV+WT +I G  
Sbjct: 324 AGRQVHG--------------NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 369

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           +HG A++A+ L+  M+   V+P+ V ++ ++ ACSH G VE+ +E F  +  D  ++P +
Sbjct: 370 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 429

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL- 513
           +HY+C++D LGR+G LDEA+NLI +MP  P    W  LLSAC+  G  ++G  + + L+ 
Sbjct: 430 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 489

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
                +P  Y+++SNI+A A  W +    R+      ++K  G S VEV KE   FY G+
Sbjct: 490 SFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE 549

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HPL E I ++L ++E+ M+   G+V    + LHD+ E+ KE+ L  HSE+ A+   L+
Sbjct: 550 TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLL 609

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           +      PG  IR+ KNLRVCGDCH  +K +S+I +   +VRDATR+H F+GG CSC D+
Sbjct: 610 KA----VPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 665



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 46/250 (18%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    +D+G Q+H   +   ++ D ++ + L+DMYAKCG +N A AVFD +  +N 
Sbjct: 180 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 239

Query: 79  V-------------------------------SWTALMCGFLQNGNAKACLSLFCQMGSS 107
           +                               SWTAL+ GF+Q+G      S+F +M   
Sbjct: 240 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 299

Query: 108 SVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
            V   +   LS+ + A   L++   G Q+H              GN++IDMY+KC  +  
Sbjct: 300 RVDILDPLVLSSIVGACANLAASIAGRQVH--------------GNALIDMYAKCSDVIA 345

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  M  + +++W ++I G    G ++K L L+  M  HG  P+E TF   + AC  
Sbjct: 346 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 405

Query: 227 LGSVGGGTQI 236
           +G V  G ++
Sbjct: 406 VGFVEKGREL 415



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 21/218 (9%)

Query: 309 RERSLQVDGFVLSSMMGVFADFA--------LVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           R++ L    F+    + VF DF          +   K +HA+  K+       ++N++V+
Sbjct: 55  RKKLLFSLTFIFMFKLFVFFDFGSYFSRMNRTLTTAKALHAHIVKLGIVQCCPLANTLVN 114

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA-KEAVGLFRKMLLDDVEPDGV 419
           +Y KCG    A ++F+EMP ++ + W  ++T   +  L+ K             + PD  
Sbjct: 115 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 174

Query: 420 AYLAVLSACSHSGLVEESQE-----YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            + A++ AC++ G ++  ++       S   ND+ +K      S +VD   + G L+ AK
Sbjct: 175 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK------SSLVDMYAKCGLLNSAK 228

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            + +S+ VK +I+ W  ++S     G  E   E+  IL
Sbjct: 229 AVFDSIRVKNTIS-WTAMVSGYAKSGRKEEALELFRIL 265


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/567 (35%), Positives = 331/567 (58%), Gaps = 8/567 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G+Q+HG  +KSG    P+V N++I+ YSK     ++ R F+  P KS  TW+++I+
Sbjct: 30  SIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS 89

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L   RKM      PD+    S  K+CG L     G  +H   + +G  Y
Sbjct: 90  CFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTG--Y 147

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
                +  SLVD Y KCG +V AR++FD +  ++V++WS ++ GYAQ     EA+ LF++
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKE 207

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
               +L V+ +  S+++ V A+  L+E G+QI     K      + V +S+V +Y KCG 
Sbjct: 208 ALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGD 267

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           ++ A ++F+E+P++N+  W  ++    +H   ++ + LF++M L  ++P+ + +L VL+A
Sbjct: 268 LEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+GLV+E + YF  L  + R++P  +HY+ +VD LGRAG+L+EA  ++ +MP+ P+ +
Sbjct: 328 CSHAGLVDEGKYYFD-LMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTES 386

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W  LL++C +H + EL     + +  L   +   ++ +SN +A  G + +  + RKL R
Sbjct: 387 VWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G KK  G SWVE   ++H F  G+  H  +++I++ L E+ + M E+ G+V    Y L
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEM-EKAGYVADTSYVL 505

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            ++  + K +++R HSE+LAI   L+    +    + IRV KNLRVCGDCH  IK +S  
Sbjct: 506 REVDGDEKNQTIRYHSERLAIAFGLITFPAD----RPIRVMKNLRVCGDCHNAIKFMSIC 561

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + V +VRD  RFHRFE G CSC DYW
Sbjct: 562 TRRVIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 206/385 (53%), Gaps = 3/385 (0%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
            ++ D L   +++  +  G+QLHG +VK G S   ++ N+LI+ Y+K      +   F+ 
Sbjct: 16  NQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED 75

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
             +++  +W++++  F QN      L    +M + S++P++  L +  K+ G+LS  + G
Sbjct: 76  SPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIG 135

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             +H + MK+G++ +  VG+S++DMY+KCG I  A +MFD MP ++++TW+ M+ GY   
Sbjct: 136 KSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQM 195

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G +++ L LF++        ++++F++ +  C +   +  G QI G  I S F  S  + 
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSS--SF 253

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SLV  Y KCG L  A +VFD +  +++  W++++   AQ  +  + +ELF++++   
Sbjct: 254 VGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSG 313

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ +     +++   +   LV++GK       +           S+VDM  + G ++EA 
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEAL 373

Query: 373 ELFNEMPVKNVVT-WTVIITGYGKH 396
           E+   MP+    + W  ++T    H
Sbjct: 374 EIVTNMPIDPTESVWGALLTSCTIH 398



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 142/267 (53%), Gaps = 2/267 (0%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           SL  +   L  + + C      D G  +H   +K G+  D+ + + L+DMYAKCGE+  A
Sbjct: 111 SLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD+M  RNVV+W+ +M G+ Q G  +  L LF +    ++  N+++ ST I      
Sbjct: 171 RKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANS 230

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
           + +E G QI G+C+KS F+ +  VG+S++ +YSKCG +  A ++FD +P ++L  WNAM+
Sbjct: 231 TLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAML 290

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
                  ++ K + LF++M+  G  P+  TF + L AC   G V  G      +  S   
Sbjct: 291 KACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIE 350

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRV 273
            + K     SLVD   + G L EA  +
Sbjct: 351 PTDKHY--ASLVDMLGRAGKLEEALEI 375


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/569 (36%), Positives = 333/569 (58%), Gaps = 8/569 (1%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L S+    ++    + SG + +  + N ++ M+ KCG + +A R+FD MP K++++WN +
Sbjct: 144 LKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTI 203

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I G V AG   +   LF  M +         F + ++A   LG +  G Q+H   + +G 
Sbjct: 204 IGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGV 263

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   +A +L+D Y KCG + +A+ VFD + +K+ + W+S+I GYA      EA+ ++
Sbjct: 264 GGDV--FVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMY 321

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R+  +++D F  S ++ + A  A +E  KQ HA   +   GLD   + ++VD+Y K 
Sbjct: 322 YEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKW 381

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G I++A  +F+ MP KNV++W  +I GYG HG   EAV +F +ML + + P+ V +LAVL
Sbjct: 382 GRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVL 441

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACS+SGL +   E F  +  D ++KPR  HY+C+++ LGR G LDEA  LI+  P KP+
Sbjct: 442 SACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPT 501

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
           + +W  LL+ACRVH + ELG+   E L  +  +   NYV++ NI+  +G   E   + + 
Sbjct: 502 VNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQT 561

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            + +GL+ +   SW+E+ K+ + F  GD  H  +++I+Q L E+   + +  G+V   K+
Sbjct: 562 LKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKH-GYVPQXKF 620

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            L D+ E+ +E  L  HSEKLAI   L+    N      +++ ++ R+CGDCH  IK ++
Sbjct: 621 LLPDVDEQ-EERVLLYHSEKLAIAFGLI----NTSDWTPLQIVQSHRICGDCHSAIKLIA 675

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + +   VVRDA+RFH F+ G CSCGDYW
Sbjct: 676 LVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 210/406 (51%), Gaps = 13/406 (3%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           ++  G   D  L N ++ M+ KCG M  A  +FD+M E+N++SW  ++ G +  G+    
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEA 216

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
             LF  M             T I+AS  L  +  G Q+H   +K+G   +  V  ++IDM
Sbjct: 217 FRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDM 276

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           YSKCG I +A  +FD MP K+ + WN++IAGY L GYS++ L ++ +M++ G   D FTF
Sbjct: 277 YSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTF 336

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
           +  ++ C  L S+    Q H  L+  GF   +  V   +LVD Y K G + +A+ VFD++
Sbjct: 337 SIIIRICARLASLEHAKQAHAGLVRHGF--GLDIVANTALVDLYSKWGRIEDAKHVFDMM 394

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K+VISW++LI GY       EA+E+F ++    +  +     +++   +   L ++G 
Sbjct: 395 PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGW 454

Query: 338 QIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG 392
           +I    ++     P  +  +    ++++  + GL+DEA  L  + P K  V  W  ++T 
Sbjct: 455 EIFESMSRDHKIKPRAMHYAC---MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEES 437
              H      +G F    L  + P+ ++ Y+ +L+  + SG +EE+
Sbjct: 512 CRVH--KNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEA 555



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 123/210 (58%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+  G QLH   +K G   D+ +   LIDMY+KCG +  A  VFD+M E+  V W +++ 
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  +G ++  LS++ +M  S VK + FT S  I+    L+S+E+  Q H   ++ GF  
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           + V   +++D+YSK GRI +A  +FD+MP K++I+WNA+IAGY   G   + + +F +M 
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML 426

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
             G +P+  TF + L AC   G    G +I
Sbjct: 427 HEGMVPNHVTFLAVLSACSYSGLSDRGWEI 456



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C++   L++  Q H  LV+ GF  D++ N  L+D+Y+K G +  A  VFD M  +NV
Sbjct: 340 IRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNV 399

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           +SW AL+ G+  +G     + +F +M    + PN  T    + A       + G +I   
Sbjct: 400 ISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           M      +   +    +I++  + G ++EA  +    P K  +  W A++  
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/710 (32%), Positives = 363/710 (51%), Gaps = 80/710 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+CC+  +    G QLH   V  GF  D+ + N L+++YA CG +  A  VF++    ++
Sbjct: 112 LQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDL 171

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW  L+ G++Q G  +    +F                              GM     
Sbjct: 172 VSWNTLLAGYVQAGEVEEAERVF-----------------------------EGMP---- 198

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK--SLITWNAMIAGYVLAGYSD 196
                 E N +  NS+I ++ + G + +A R+F+ +  +   +++W+AM++ Y      +
Sbjct: 199 ------ERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGE 252

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L+LF +M+  G   DE    S L AC  + +V  G  +HG  +  G    V   +  +
Sbjct: 253 EALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVS--LKNA 310

Query: 257 LVDFYVKCGCLVEARRVFD--------------------------------LIEQKSVIS 284
           L+  Y  CG +V+ARR+FD                                 + +K V+S
Sbjct: 311 LIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVS 370

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           WS++I GYAQ E  +EA+ LF++++   ++ D   L S +      A ++ GK IHAY +
Sbjct: 371 WSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYIS 430

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVG 404
           +    ++  +S +++DMY+KCG ++ A E+F  M  K V TW  +I G   +G  ++++ 
Sbjct: 431 RNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLN 490

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL 464
           +F  M      P+ + ++ VL AC H GLV + + YF+ + ++ +++  I+HY C+VD L
Sbjct: 491 MFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLL 550

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GRAG L EA+ LI+SMP+ P +A W  LL ACR H D E+G  +G  L++L  D+   +V
Sbjct: 551 GRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHV 610

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           ++SNI+A  G+W     +R +    G+ K  G S +E +  +H F  GD THP    I  
Sbjct: 611 LLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEH 670

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
           +L  +  ++K E G+V        DI EE KE +L  HSEKLA+   L+       P   
Sbjct: 671 MLDVVAAKLKIE-GYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLI----TISPPTP 725

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IRV KNLR+C DCH  +K +SK      VVRD  RFH F+ G CSC D+W
Sbjct: 726 IRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 221/478 (46%), Gaps = 94/478 (19%)

Query: 69  VFDKMLERNVVSWTALMCG--FLQNGNAKACL--SLFCQMGSSSVKPNEFTLSTNIKASG 124
           +F+ +   N  +W  +M    +LQN   +A L   LF    +S  KP+ +T    ++   
Sbjct: 60  IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFL---ASHAKPDSYTYPILLQCCA 116

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
              S   G Q+H   + SGF+ +  V N+++++Y+ CG +  A R+F+  P   L++WN 
Sbjct: 117 ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           ++AGYV AG  ++   +F  M E                                     
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPER------------------------------------ 200

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAM 302
                 T+ + S++  + + GC+ +ARR+F+ +   ++ ++SWS+++  Y Q E   EA+
Sbjct: 201 -----NTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEAL 255

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS------- 355
            LF +++   + VD  V+ S +   +    VE G+ +H  A KV  G++  VS       
Sbjct: 256 VLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKV--GVEDYVSLKNALIH 313

Query: 356 ---------------------------NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
                                      NS++  YL+CG I +A  LF  MP K+VV+W+ 
Sbjct: 314 LYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSA 373

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ---EYFSRLC 445
           +I+GY +H    EA+ LF++M L  V PD  A ++ +SAC+H   ++  +    Y SR  
Sbjct: 374 MISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISR-- 431

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
              +++  +   + ++D   + G ++ A  +  +M  K  ++ W  ++    ++G +E
Sbjct: 432 --NKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK-GVSTWNAVILGLAMNGSVE 486



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 158/339 (46%), Gaps = 44/339 (12%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD------ 71
           +L  CS+ L ++ G  +HG  VK+G    + L N LI +Y+ CGE+  A  +FD      
Sbjct: 276 ALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELL 335

Query: 72  --------------------------KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
                                      M E++VVSW+A++ G+ Q+      L+LF +M 
Sbjct: 336 DLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQ 395

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              V+P+E  L + I A   L++++ G  IH    ++  + N ++  ++IDMY KCG + 
Sbjct: 396 LHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVE 455

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A  +F  M  K + TWNA+I G  + G  ++ L +F  M++ G +P+E TF   L AC 
Sbjct: 456 NALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACR 515

Query: 226 SLGSVGGG-----TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ- 279
            +G V  G     + IH   I +   +       G +VD   + G L EA  + D +   
Sbjct: 516 HMGLVNDGRHYFNSMIHEHKIEANIKH------YGCMVDLLGRAGLLKEAEELIDSMPMA 569

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             V +W +L+    +  +      L R+L +     DGF
Sbjct: 570 PDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGF 608



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/472 (22%), Positives = 198/472 (41%), Gaps = 97/472 (20%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI---NEAARMFDVMPAKSLITWNAMIAGYV 190
           Q+    + +G   +P   + +I+  S    +   + + R+F+ +   +  TWN ++  ++
Sbjct: 21  QLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHL 80

Query: 191 LAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
               S    LL  K+    H + PD +T+   L+ C +  S   G Q+H   ++SGF   
Sbjct: 81  YLQNSPHQALLHYKLFLASHAK-PDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGD 139

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           V   +  +L++ Y  CG +  ARRVF+      ++SW++L+ GY Q   + EA  +F  +
Sbjct: 140 V--YVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM 197

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            ER                                       +T  SNS++ ++ + G +
Sbjct: 198 PER---------------------------------------NTIASNSMIALFGRKGCV 218

Query: 369 DEATELFNEM--PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++A  +FN +    +++V+W+ +++ Y ++ + +EA+ LF +M    V  D V  ++ LS
Sbjct: 219 EKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALS 278

Query: 427 ACSHSGLVEES------------QEYFS-------------------RLCNDKRMKPRIE 455
           ACS    VE              ++Y S                   R+ +D      + 
Sbjct: 279 ACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLI 338

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH----GDLELGREVGEI 511
            ++ ++    R G + +A+ L  SMP K  ++ W  ++S    H      L L +E    
Sbjct: 339 SWNSMISGYLRCGSIQDAEMLFYSMPEKDVVS-WSAMISGYAQHECFSEALALFQE---- 393

Query: 512 LLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
            ++L G  P    ++S I A       C  L  L   K +     R+ ++V+
Sbjct: 394 -MQLHGVRPDETALVSAISA-------CTHLATLDLGKWIHAYISRNKLQVN 437



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 5/233 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  ++  C+    LD G  +H  + +     +++L+  LIDMY KCG +  A  VF  M 
Sbjct: 406 LVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+ V +W A++ G   NG+ +  L++F  M  +   PNE T    + A   +  V +G  
Sbjct: 466 EKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRH 525

Query: 135 -IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLA 192
             + M  +   E N      ++D+  + G + EA  + D MP A  + TW A++      
Sbjct: 526 YFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH 585

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC-GSLGSVGGGTQIHGFLITSG 244
             ++ G  L RK+ +    PD   F   L     S G+ G   +I G +   G
Sbjct: 586 RDNEMGERLGRKLIQLQ--PDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHG 636


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/538 (36%), Positives = 312/538 (57%), Gaps = 8/538 (1%)

Query: 157 MYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFT 216
           MY KCG +++A  +FD MP++ +++W  +IAGY       + + L   M      P+ FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           FTS LKA G+ G    G Q+H   +   + +     +  +L+D Y +C  +  A  VFD 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVK--YNWDEDVYVGSALLDMYARCEQMDMAIMVFDR 118

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  K+ +SW++LI G+A++ +    +  F +++        F  SSM   FA    +EQG
Sbjct: 119 LVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           + +HA+  K    L   V N+++ MY K G + +A ++F+ M  +++VTW  ++T   ++
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           GL KEAV  F ++    ++ + + +L+VL+ACSH GLV+E + YF  +  D  ++P I+H
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDH 297

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y   VD LGRAG L EA   +  MP++P+ A+W  LL ACR+H + ++G+   + +  LD
Sbjct: 298 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELD 357

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
            D+    V++ NI+A  G WN+  R+RK+ ++ G+KK    SWV+++  +H F   DDTH
Sbjct: 358 PDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTH 417

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P +  I+++  E+  R+K+  G+V    + L  I E+ +E  L+ HSEK+A+  AL+   
Sbjct: 418 PKSGDIYRMWEEINMRIKKA-GYVPNTAHVLLHINEQERETKLKYHSEKIALAFALI--- 473

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            N   G  IR+ KN+R+CGDCH   K +SK+ K   VVRD  RFH F  G CSCGDYW
Sbjct: 474 -NMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 195/363 (53%), Gaps = 5/363 (1%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY KCG ++ A  VFDKM  R+VVSWT L+ G+ QN      + L   M  +  +PN FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            ++ +KA+G       G Q+H + +K  ++ +  VG++++DMY++C +++ A  +FD + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           +K+ ++WNA+IAG+      +  L+ F +MQ +G     FT++S   A   +G++  G  
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H  LI SG    +   +  +++  Y K G +V+AR+VFD ++++ +++W++++   AQ 
Sbjct: 181 VHAHLIKSG--QKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
               EA+  F ++R+  +Q++     S++   +   LV++GK             +    
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHY 298

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            S VD+  + GL+ EA     +MP++     W  ++     H  AK  +G +    + ++
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK--MGQYAADHVFEL 356

Query: 415 EPD 417
           +PD
Sbjct: 357 DPD 359



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 133/260 (51%), Gaps = 3/260 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+H   VK  +  D+ + + L+DMYA+C +M+ A  VFD+++ +N VSW AL+ GF +
Sbjct: 77  GEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFAR 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
             + +  L  F +M  +      FT S+   A   + ++E G  +H   +KSG +    V
Sbjct: 137 KADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFV 196

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++ MY+K G + +A ++FD M  + L+TWN M+      G   + +  F ++++ G 
Sbjct: 197 GNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGI 256

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++ TF S L AC   G V  G   H F +   +    +     S VD   + G L EA
Sbjct: 257 QLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEA 314

Query: 271 R-RVFDLIEQKSVISWSSLI 289
              VF +  + +   W +L+
Sbjct: 315 LIFVFKMPMEPTAAVWGALL 334



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 5/164 (3%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G  +H  L+K G      + N ++ MYAK G M  A  VFD+M +R++V+W  ++  
Sbjct: 175 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 234

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
             Q G  K  ++ F ++    ++ N+ T  + + A      V+ G   H   M   +   
Sbjct: 235 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQ 292

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           P + +  S +D+  + G + EA      MP + +   W A++  
Sbjct: 293 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/605 (34%), Positives = 345/605 (57%), Gaps = 9/605 (1%)

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           + G+  + L +F  +   + +P+  T +  + A   L  +  G  +      +G++ +  
Sbjct: 86  RRGSPASALRVFRAL-PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V +S++ +Y++ G + +A ++F  MP +  +TW+ M+AG+V AG     + ++R+M+E G
Sbjct: 145 VCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
              DE      ++AC +  +V  G  +HG L+  G    V  V A SLVD Y K G L  
Sbjct: 205 VKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDV--VTATSLVDMYAKNGLLDV 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A RVF L+  ++ +SWS++I G+AQ     EA+ LFR ++   +Q D   L S +   ++
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSN 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              ++ G+ +H +  +     +  +  + +DMY KCG +  A  LFN +  ++++ W  +
Sbjct: 323 IGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I   G HG  ++A+ LF++M    + PD   + ++LSA SHSGLVEE + +F R+ N  +
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFK 441

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P  +HY C+VD L R+G ++EA +L+ SM  +P++AIW  LLS C  +  LELG  + 
Sbjct: 442 ITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIA 501

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           + +L L  D+     ++SN++A    W++  ++RKL +  G KK+ G S +E+    H F
Sbjct: 502 DNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVF 561

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
              D +HP  E+I   + +++  M+ ++G++   ++  HD++EE KE+ L  HSE+LAI 
Sbjct: 562 VMEDQSHPQREEIVSKVAKLDLEMR-KMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIA 620

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN  PG  + + KNLRVCGDCH+ IK +SKI     VVRDA RFH F+ GVCS
Sbjct: 621 FGL----LNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCS 676

Query: 690 CGDYW 694
           C DYW
Sbjct: 677 CRDYW 681



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 213/414 (51%), Gaps = 13/414 (3%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C++   L  G  +       G+  D+ + + L+ +YA+ G M  A  VF +M  R+
Sbjct: 114 ALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRD 173

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+W+ ++ GF+  G     + ++ +M    VK +E  +   I+A     +V  G  +HG
Sbjct: 174 RVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHG 233

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G   + V   S++DMY+K G ++ A R+F +M  ++ ++W+AMI+G+   G SD+
Sbjct: 234 HLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDE 293

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L LFR MQ  G  PD     S L AC ++G +  G  +HGF++     +    ++  + 
Sbjct: 294 ALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR---FDFNCILGTAA 350

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y KCG L  A+ +F++I  + +I W+++I          +A+ LF+++ E  ++ D 
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCGLIDEATE 373
              +S++   +   LVE+GK    +  ++ +    + +      +VD+  + GL++EA++
Sbjct: 411 ATFASLLSALSHSGLVEEGK---LWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASD 467

Query: 374 LFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           L   M  +  V  W  +++G   +   +    +   +L  +++PD V  LA++S
Sbjct: 468 LLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL--ELQPDDVGVLALVS 519


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/700 (33%), Positives = 378/700 (54%), Gaps = 35/700 (5%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++   A +L  CS++  L  G  +HG ++  G    ++L N LIDMY+KCG+++ A  +F
Sbjct: 66  DKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILF 125

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D   + + VSW +L+ G++QNG  +  L++  +M  + +  N +TL + +KA    SS  
Sbjct: 126 DHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKAC---SSNF 182

Query: 131 NGMQ-----IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           NG +     +H   +K G   + VVG +++DMY+K G +++A ++FD M  K+++ +NAM
Sbjct: 183 NGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAM 242

Query: 186 IAGYVLAGYSD-----KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +AG +     +     K L LF +M+  G  P  FT++S LKAC  +       Q+H  +
Sbjct: 243 MAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALM 302

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
             +G        I   L+D Y   G +++A   F+ I   +++  +++I GY Q      
Sbjct: 303 CKNGLL--SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFES 360

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ LF +L     + D F+ S++M   A+  ++  G+QI  +A KV     T   NS + 
Sbjct: 361 ALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIW 420

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY K G +  A   F +M   ++V+W+ +I    +HG A EA+  F  M    +EP+  A
Sbjct: 421 MYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFA 480

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +L VL ACSH GLVEE   YF  +  D +MK  ++H  C+VD LGRAGRL +A++LI  +
Sbjct: 481 FLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRL 540

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
             +    +W+ LLSACR+H D    + V + ++ L+     +YV++ NI+ DAG+     
Sbjct: 541 GFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAAS 600

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM---EKRM---K 594
           ++R L   + +KK  G SW+++  +++ F  GD +H  + +I+  L EM    KR+   K
Sbjct: 601 KVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAK 660

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           + LG+            E     ++  HSEKLA+      G L       +RV KNLR+C
Sbjct: 661 DILGYKI----------EHEHLTNVNYHSEKLAVAF----GVLYLSESAPVRVMKNLRIC 706

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  +K  S + K   +VRD+ RFH F+ G CSCGDYW
Sbjct: 707 LDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 231/456 (50%), Gaps = 25/456 (5%)

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
           KCG+   A  +FDKM + N+V++ +L+ G++Q  N    + LF +     +K +++  + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            + A     ++  G  IHG+ +  G     V+ NS+IDMYSKCG+++ A  +FD      
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS--LGSVGGGTQI 236
            ++WN++IAGYV  G  ++ L + +KM ++G   + +T  S LKAC S   G    GT +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H   I  G    V  V+  +L+D Y K G L +A ++FD +  K+V+ +++++ G  Q+E
Sbjct: 193 HDHAIKLGLHLDV--VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 297 NLAE-----AMELFRQLRERSLQVDGFVLSSMMG---VFADFALVEQGKQIHAYAAKVPS 348
            + +     A+ LF +++   ++   F  SS++    +  DF      KQ+HA   K   
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKF---AKQVHALMCKNGL 307

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
             D  + + ++D+Y   G + +A   FN +    +V  T +I GY ++G  + A+ LF +
Sbjct: 308 LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYE 367

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS----L 464
           +L  + +PD   +  ++S+C++ G++   ++           K  I  ++   +S     
Sbjct: 368 LLTYEEKPDEFIFSTIMSSCANMGMLRSGEQ-----IQGHATKVGISRFTIFQNSQIWMY 422

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++G L  A NL       P I  W T++ +   HG
Sbjct: 423 AKSGDL-YAANLTFQQMENPDIVSWSTMICSNAQHG 457


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/566 (35%), Positives = 326/566 (57%), Gaps = 2/566 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q H   VK G S D+ + + L++MY K G +  A  +FD+M ERN VSW  ++ G+  
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +  A   + +F  M       NEF L++ + A      V  G Q+H + +K+G      V
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MY+KCG +++A R F+    K+ ITW+AM+ GY   G SDK L LF KM   G 
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGV 316

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           +P EFT    + AC  L +V  G Q+H F    GF   ++  +  ++VD Y KCG L +A
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF--GLQLYVLSAVVDMYAKCGSLADA 374

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R+ F+ ++Q  V+ W+S+I GY Q  +    + L+ +++   +  +   ++S++   +  
Sbjct: 375 RKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSL 434

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A ++QGKQ+HA   K    L+  + +++  MY KCG +D+   +F  MP ++V++W  +I
Sbjct: 435 AALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMI 494

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +G  ++G   +A+ LF KMLL+ ++PD V ++ +LSACSH GLV+   EYF  + ++  +
Sbjct: 495 SGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNI 554

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P +EHY+C+VD L RAG+L+EAK  IES  V   + +W+ LL AC+ H + ELG   GE
Sbjct: 555 APMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGE 614

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ L       YV++S+I+   G     ER+R++ +++G+ K  G SW+E+   +H F 
Sbjct: 615 KLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFV 674

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEE 596
            GD+ HP  ++I   L  + K M +E
Sbjct: 675 VGDNQHPQVDEIRLELELLTKLMIDE 700



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/574 (30%), Positives = 298/574 (51%), Gaps = 46/574 (8%)

Query: 11  ERQRLADSLRCC-SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
            RQ L D + C  +KN+L   G  LH  ++K G    + + N  +++YAK   ++ A  +
Sbjct: 11  HRQLLQDLIECTHNKNIL--KGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 70  FDKMLE--RNVVSWTALMCGFLQNGNAKA---CLSLFCQM-GSSSVKPNEFTLSTNIKAS 123
           FD + +  ++ VSW +L+  F QN ++ +    +SLF +M  +++V PN  TL+    A+
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             LS V  G Q H + +K+G   +  VG+S+++MY K G + +A ++FD MP ++ ++W 
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            MI+GY  +  +DK + +F  M+   EI +EF  TS L A  S   V  G Q+H   I +
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN 248

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G    V   +A +LV  Y KCG L +A R F+    K+ I+WS+++ GYAQ  +  +A++
Sbjct: 249 GLLAIVS--VANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALK 306

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF ++    +    F L  ++   +D   V +GKQ+H++A K+  GL   V +++VDMY 
Sbjct: 307 LFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYA 366

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG + +A + F  +   +VV WT IITGY ++G  +  + L+ KM ++ V P+ +   +
Sbjct: 367 KCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMAS 426

Query: 424 VLSACSHSGLVEESQEYFSRL---------------------CNDK--------RMKPR- 453
           VL ACS    +++ ++  +R+                     C           RM  R 
Sbjct: 427 VLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRD 486

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  ++ ++  L + G  ++A  L E M    +KP    +  LLSAC   G ++ G E  +
Sbjct: 487 VISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFK 546

Query: 511 ILLRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
           ++       P+  +Y  M +I + AG  NE +  
Sbjct: 547 MMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEF 580


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/699 (32%), Positives = 369/699 (52%), Gaps = 32/699 (4%)

Query: 2    NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKC 60
            N+VSF  +         L  CS +  LD+G ++H  ++     + +  +   L+ MY KC
Sbjct: 436  NKVSFIAI---------LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486

Query: 61   GEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
            G ++ A  VF +M    R++V+W  ++  + QN  +K       +M    V P+  + ++
Sbjct: 487  GSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546

Query: 119  NIKASGVLSSV--ENGMQIHGMC-MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                  VLSS       Q+  MC ++SG+  +  +  ++I M+ +C  + +A  +F+ M 
Sbjct: 547  ------VLSSCYCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNEMD 599

Query: 176  AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
               +++W AM++         +   LFR+MQ  G IPD+FT  +TL  C +  ++G G  
Sbjct: 600  HGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKV 659

Query: 236  IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
            IH  +   G    +   +  +L++ Y  CG   EA   F+ ++ + ++SW+ +   YAQ 
Sbjct: 660  IHACVTEIGLEADI--AVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717

Query: 296  ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
                EA+ LFRQ++   ++ D    S+ + V    ALV  GK  HA AA+     D SV+
Sbjct: 718  GLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVA 777

Query: 356  NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
              +V +Y KCG +DEA  LF       VV    II    +HG ++EAV +F KM  + V 
Sbjct: 778  TGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVR 837

Query: 416  PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
            PD    ++++SAC H+G+VEE    F  +     + P +EHY+C VD LGRAG+L+ A+ 
Sbjct: 838  PDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQ 897

Query: 476  LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            +I  MP + +  +W +LL  C++ GD ELG    + +L LD  N   +V++SNI+   G 
Sbjct: 898  IIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGK 957

Query: 536  WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
            W + +  RK    + +K   G SW E+ K++H F  GD +HP T++I+ VL ++E  M+ 
Sbjct: 958  WKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRR 1017

Query: 596  ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
                 Y     L D+++E KE++L  HSE++AI   L+       P   +++ KNLRVCG
Sbjct: 1018 A---GYEADKGL-DVEDELKEKALGYHSERIAIAFGLI----ATPPETTLKIVKNLRVCG 1069

Query: 656  DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +S ++    +VRD+ RFH F  G CSC D W
Sbjct: 1070 DCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 239/502 (47%), Gaps = 25/502 (4%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++ Q     L+ C  +  L  G   H  +   G    L L N LI+MY +CG +  A A+
Sbjct: 23  ADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSS 128
           F KM ERNVVSWTAL+    Q G      +LF  M   SS  PN +TL   + A      
Sbjct: 83  FSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142

Query: 129 VENGMQIHGMCMKSGFE----WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           +  G  IH M  + G E       +VGN++I+MY+KCG + +A  +F  +P K +++W A
Sbjct: 143 LAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTA 202

Query: 185 MIAGYVLAG--YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           M   Y      Y D  L +FR+M      P+  TF + L AC SL     GT +H  L  
Sbjct: 203 MAGAYAQERRFYPD-ALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHE 258

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS---VISWSSLILGYAQEENLA 299
           +   +    + + +L++ Y KCG    A  VF  +  +    ++SW+++I    +     
Sbjct: 259 ASLGFD--PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHG 316

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFA----DFALVEQGKQIHAYAAKVPSGLDTSVS 355
           +AM +FR+LR   ++ +   L +++   A    DF      +  H    +     D  + 
Sbjct: 317 DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG---AARGFHGRIWESGYLRDVVIG 373

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           N+I+ MY KCG    A  +F  +  K +V++W  ++          + V  F  MLL  +
Sbjct: 374 NAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P+ V+++A+L+ACS+S  ++  ++  S +   +R        + +V   G+ G + EA+
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAE 493

Query: 475 NLIESMPVKP-SIAIWQTLLSA 495
            + + MP+   S+  W  +L A
Sbjct: 494 LVFKEMPLPSRSLVTWNVMLGA 515


>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
          Length = 674

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/588 (37%), Positives = 339/588 (57%), Gaps = 12/588 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           + +L+  +K   L  G QLH  ++K+G    L L N ++ +Y KC E N  C +FD+M  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 76  RNVVSWTALMCGFLQNGNAKACL-----SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           +NVVSW  L+CG ++ GN K  L       F QM    + PN  TL+  ++AS  L+ V 
Sbjct: 137 KNVVSWNTLICGVVE-GNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVG 195

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
              Q+H   +KSGF+ N  VG++++D Y+K G ++EA   FD + ++ L+ WN M++ Y 
Sbjct: 196 ICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYA 255

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
           L G   K   +F+ M+  G   D FTFTS + +CG LGS G G Q+HG +I   F   V 
Sbjct: 256 LNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDV- 314

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
            ++A +LVD Y K   + +AR+ FD +  K+++SW+++ +GY Q  +  E M L +++  
Sbjct: 315 -LVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIR 373

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLI 368
                D   L+S++    + +   +  Q+HAY   V +G +   S++N++V  Y KCG I
Sbjct: 374 VYTYPDELALASILSSCGNLSATSEVVQVHAYV--VENGFEAFLSIANALVSAYSKCGSI 431

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
             A + F+ +   ++++WT ++  Y  HGL+K+ V +F K+L  +V PD VA+L VLSAC
Sbjct: 432 GSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSAC 491

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           +H G V E   YF+ + N  ++ P  EHY+ I+D LGRAG LDEA NL+ SMPV+P    
Sbjct: 492 AHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDT 551

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
               L AC+V+ ++ L R   E L  ++ + P  Y +MSN++A  G W +  R+RKL R 
Sbjct: 552 LGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRE 611

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
           +   KV G SW+E   E+H F   D THP   +++ +L  + + MKEE
Sbjct: 612 RCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMKEE 659



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C         VQ+H  +V+ GF   L + N L+  Y+KCG +  A   F  + 
Sbjct: 383 LASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVA 442

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E +++SWT+LM  +  +G +K  + +F ++ SS+V+P++      +   GVLS+  +G  
Sbjct: 443 EPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDK------VAFLGVLSACAHG-- 494

Query: 135 IHGMCMKSGFEWNPVVG-----------NSIIDMYSKCGRINEAARMFDVMPAK 177
             G  ++    +N ++             SIID+  + G ++EA  +   MP +
Sbjct: 495 --GFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVE 546


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/574 (36%), Positives = 325/574 (56%), Gaps = 16/574 (2%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI---NEAARMFDVMPAKSLITWN 183
           +S+    QI    +K+  + NP V   +I+  +    I   + A RMFD +P   ++ +N
Sbjct: 46  TSLRELKQIQAYTIKT-HQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFN 104

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            M  GY       + +LL  ++   G +PD++TF+S LKAC  L ++  G Q+H   +  
Sbjct: 105 TMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKL 164

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G        +  +L++ Y  C  +  ARRVFD I +  V++++++I   A+     EA+ 
Sbjct: 165 GV--GDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALA 222

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDM 361
           LFR+L+E  L+     +   +   A    ++ G+ IH Y  K  +G D    V+ +++DM
Sbjct: 223 LFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKK--NGFDQYVKVNTALIDM 280

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG +D+A  +F +MP ++   W+ +I  Y  HG   +A+ + R+M    V+PD + +
Sbjct: 281 YAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITF 340

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L +L ACSH+GLVEE  EYF  + ++  + P I+HY C++D LGRAGRL+EA   I+ +P
Sbjct: 341 LGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELP 400

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           +KP+  +W+TLLS+C  HG++E+ + V + +  LD  +  +YV++SN+ A  G W++   
Sbjct: 401 IKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNH 460

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           LRK+   KG  KV G S +EV+  +H F+ GD  H  +  +H  L E+ K +K   G+V 
Sbjct: 461 LRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLA-GYVP 519

Query: 602 GVKYALH-DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
                 + DI++E KE  LR HSEKLAI   L    LN  PG  IRV KNLRVC DCH  
Sbjct: 520 DTSLVFYADIEDEEKEIVLRYHSEKLAITYGL----LNTPPGTTIRVVKNLRVCVDCHNA 575

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K +S I     ++RD  RFH F+ G CSCGDYW
Sbjct: 576 AKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 201/376 (53%), Gaps = 9/376 (2%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
             M+ A  +FDK+ + ++V +  +  G+ +  +    + L  Q+  S + P+++T S+ +
Sbjct: 83  ASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLL 142

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L ++E G Q+H + +K G   N  V  ++I+MY+ C  ++ A R+FD +    ++
Sbjct: 143 KACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVV 202

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            +NA+I         ++ L LFR++QE G  P + T    L +C  LG++  G  IH ++
Sbjct: 203 AYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYV 262

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
             +GF   VK  +  +L+D Y KCG L +A  VF  + ++   +WS++I+ YA   + ++
Sbjct: 263 KKNGFDQYVK--VNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQ 320

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
           A+ + R++++  +Q D      ++   +   LVE+G + + ++     G+  S+ +   +
Sbjct: 321 AISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYE-YFHSMTHEYGIVPSIKHYGCM 379

Query: 359 VDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEP 416
           +D+  + G ++EA +  +E+P+K   + W  +++    HG  + A  + +++  LDD   
Sbjct: 380 IDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSH- 438

Query: 417 DGVAYLAVLSACSHSG 432
            G  Y+ + + C+ +G
Sbjct: 439 -GGDYVILSNLCARNG 453



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 155/305 (50%), Gaps = 4/305 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +    +  L+ C++   L+ G QLH   VK+G   ++ +   LI+MY  C +++ A 
Sbjct: 131 LLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAAR 190

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFDK+ E  VV++ A++    +N      L+LF ++  S +KP + T+   + +  +L 
Sbjct: 191 RVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLG 250

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +++ G  IH    K+GF+    V  ++IDMY+KCG +++A  +F  MP +    W+AMI 
Sbjct: 251 ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIV 310

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFP 246
            Y   G+  + + + R+M++    PDE TF   L AC   G V  G +  H      G  
Sbjct: 311 AYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIV 370

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV-ISWSSLILGYAQEENLAEAMELF 305
            S+K    G ++D   + G L EA +  D +  K   I W +L+   +   N+  A  + 
Sbjct: 371 PSIKHY--GCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVI 428

Query: 306 RQLRE 310
           +++ E
Sbjct: 429 QRIFE 433


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/694 (34%), Positives = 361/694 (52%), Gaps = 29/694 (4%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L  C     L+ G  +H  +       DL + N L+ MY KCG ++ A  +FD +  +N
Sbjct: 128 ALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKN 187

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST--NIKAS-GVLSSVENGMQ 134
           V+SWT L+  F +NG  +    L   M    +KP++  L T  N+ +S GVL   E+   
Sbjct: 188 VISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLD--EDSWM 245

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVL 191
            H   + SG +   VV  +++ M+++CGR+++A  +F+ +    A+ +  WNAMI  Y  
Sbjct: 246 AHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAH 305

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G S + L L   +Q  G  P+  TF S+L AC SL     G  +H  +  SGF   V  
Sbjct: 306 RGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVS- 361

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-E 310
            +A +LV  Y +CG L+++ ++F  + +K + SW+S I  +A      E ++L  Q+R E
Sbjct: 362 -VANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGE 420

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L+     L + M      A     K++H  A ++    +T V+N +VDMY K G +D 
Sbjct: 421 GGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDT 480

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F+    +NV TW  +   Y + G+ +  + L R M  D   PD V ++++LS C H
Sbjct: 481 ARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGH 540

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK--PSIAI 488
           SGL+EE++  F  +  +  + P  +HYSC++D L RAG L +A++ I  + V    S  +
Sbjct: 541 SGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPM 600

Query: 489 WQTLLSACRVHGDLEL--------GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           W  LL ACR  GD             +V ++  R   D    +V ++NI A +G+W+E  
Sbjct: 601 WMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEAL 660

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            +RK    KGL+K  GRS + V   +H F  GD  HP  E+I+  L  +E+ M +  G+V
Sbjct: 661 SIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDR-GYV 719

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
                  H++ E  K + L  HSEKLA+      G L+  PG  +R+ KNLR CGDCH  
Sbjct: 720 VDTGMVTHNVGEADKRDLLGCHSEKLAVAF----GVLSTPPGSSLRIIKNLRACGDCHTA 775

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           IK +S I     VVRD+ RFH F  G CSCGDYW
Sbjct: 776 IKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 244/498 (48%), Gaps = 27/498 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD-------LMLNNDLIDMYAKCGEMNGACAVFD 71
           L+ C +   L +G +LH  + + G   D         L N L+ MY KCG  + A   FD
Sbjct: 21  LKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFD 80

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
            +  +N+ SWT+++  +   G     L  F QM  + V+P+       +   G+L  +E+
Sbjct: 81  SIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLED 140

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  IH        + +  +GN+++ MY KCGR++ A ++FD +  K++I+W  +++ +  
Sbjct: 141 GAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAE 200

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-HGFLITSGFPYSVK 250
            G   +   L R M   G  PD+    + L  C S G +   + + H +++ SG     +
Sbjct: 201 NGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDR--E 258

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKS---VISWSSLILGYAQEENLAEAMELFRQ 307
            V+A +L+  + +CG + +AR +F+ +   S   +  W+++I  YA      EA+ L   
Sbjct: 259 AVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDS 318

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L+ + ++ +     S +G  +     + G+ +H    +     + SV+N++V MY +CG 
Sbjct: 319 LQLQGVKPNCITFISSLGACSSL---QDGRALHLLIDESGFDREVSVANALVTMYGRCGS 375

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLS 426
           + ++ +LF+EM  K++ +W   I  +  HG + E + L  +M  +  +EP  V  +  +S
Sbjct: 376 LLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMS 435

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI----VDSLGRAGRLDEAKNLIESMPV 482
           AC   GL + S    S+  +++  +  +E  +C+    VD  G+AG +D A+ + +   +
Sbjct: 436 AC--GGLADPSS---SKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDR-AL 489

Query: 483 KPSIAIWQTLLSACRVHG 500
           + ++  W  +  A R  G
Sbjct: 490 RRNVTTWNAMAGAYRQCG 507



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 151/291 (51%), Gaps = 15/291 (5%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGF-----PYSVKTVIAGSLVDFYVKCGCLVEA 270
           ++   LK CG LG +  G ++H  +  SG        S    +   LV  Y KCG   EA
Sbjct: 16  SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +R FD I  K++ SW+S+++ Y      A+A+E F Q+ +  ++ D  V  + + V    
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +E G  IH          D  + N++V MY KCG +D A +LF+ + +KNV++WT+++
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + + ++G  +E  GL R M ++ ++PD V  L +L+ CS  G+++E     S + +D  +
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDED----SWMAHDYIV 251

Query: 451 KPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPS--IAIWQTLLSA 495
              ++  + +  +L     R GR+D+A+ + E +    +  I  W  +++A
Sbjct: 252 GSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA 302


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/665 (33%), Positives = 370/665 (55%), Gaps = 19/665 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           QLH   +K        +++ L+ +Y+  K  ++  A ++FD++  R+++ W  ++  +++
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N  +   + LF ++    + P+ FTL   IK    L  V+ G QIHG+ +K GF  +  V
Sbjct: 91  NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S+++MYSKCG I+ A ++FD M  K ++ WN++I GY   G  D  L LF +M E   
Sbjct: 150 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER-- 207

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D F++T  +      G V    ++   +           V   ++++ Y+K G    A
Sbjct: 208 --DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNL------VSWNAMINGYMKSGDFDSA 259

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             +F  +    +++W+ +I GY       +A+++F  + +   +     L S++   +  
Sbjct: 260 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 319

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A++ +G+ IH+Y  K    LD  +  S+++MY KCG I+ A  +F  +  K V  WT II
Sbjct: 320 AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 379

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G G HG+A  A+ LF +M    ++P+ + ++ VL+AC+H+GLV++ ++YF  + N+ ++
Sbjct: 380 VGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKI 439

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +P +EHY C+VD L RAG L+EAKN IE+MP+ P+  IW +LL   R HG +++G    +
Sbjct: 440 EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQ 499

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            ++ +  +    Y+++SN++A +G W +   +R++   +G +K  G S VE    +H F 
Sbjct: 500 RVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFI 559

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ-EESKEESLRVHSEKLAIG 629
            GD +HP T++I+  + EM++++K  +G V      L  I+ E+ KE  L  HSE+LAI 
Sbjct: 560 VGDISHPQTKEIYAKMSEMKEKLK-CVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIA 618

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L+    N +PG  IR+ KNLRVC DCH   K LSKI     +VRD  RFH F+ G CS
Sbjct: 619 FGLI----NVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCS 674

Query: 690 CGDYW 694
           C DYW
Sbjct: 675 CMDYW 679



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 21/424 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C++  ++  G Q+HG  +K+GF  D+ +   L++MY+KCGE++ A  VFD M++++V
Sbjct: 119 IKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV 178

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG- 137
           V W +L+ G+ + G     L LF +M       + F+ +  +        VE+  ++   
Sbjct: 179 VLWNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKLFDQ 234

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           M  ++   W     N++I+ Y K G  + A  +F  MP   L+TWN MIAGY L G    
Sbjct: 235 MPCRNLVSW-----NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMD 289

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + +F  M + G  P   T  S L A   L  +G G  IH ++  +GF   +  ++  SL
Sbjct: 290 AVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF--ELDGILGTSL 347

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           ++ Y KCGC+  A  VF  I++K V  W+++I+G         A+ LF ++ +  L+ + 
Sbjct: 348 IEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNA 407

Query: 318 FVLSSMMGVFADFALVEQGKQ---IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   ++       LV+ G+Q   +     K+   L+      +VD+  + G ++EA   
Sbjct: 408 IIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH--YGCLVDILCRAGHLEEAKNT 465

Query: 375 FNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSG 432
              MP+  N V W  ++ G   HG  K  +G +    + +V P+ +  Y+ + +  + SG
Sbjct: 466 IENMPISPNKVIWMSLLGGSRNHG--KIDIGEYAAQRVIEVAPETIGCYILLSNMYAASG 523

Query: 433 LVEE 436
           + E+
Sbjct: 524 MWEK 527



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 4/187 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L   S   +L  G  +H  + K GF  D +L   LI+MYAKCG +  A  VF  + 
Sbjct: 309 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ++ V  WTA++ G   +G A   L+LF +M  + +KPN       + A      V++G Q
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVL 191
              M M   ++  P + +   ++D+  + G + EA    + MP + + + W +++ G   
Sbjct: 429 YFDMMMNE-YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRN 487

Query: 192 AGYSDKG 198
            G  D G
Sbjct: 488 HGKIDIG 494


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/589 (36%), Positives = 337/589 (57%), Gaps = 36/589 (6%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G ++H   +K+ +  +  +   +I +Y+KC  + +A  +FD MP +++++W AMI+ Y  
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321

Query: 192 AGYSDKGLLLF----------------RKMQEHGEI-----PDEFTFTSTLKACGSLGSV 230
            GY+ + L LF                 K+           P+EFTF + L +C S    
Sbjct: 322 RGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGF 381

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G QIH  +I     Y     +  SL+D Y K G + EAR VF+ + ++ V+S +++I 
Sbjct: 382 ILGRQIHSLIIK--LNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIIS 439

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA--AKVPS 348
           GYAQ     EA+ELFR+L+   ++ +    + ++   +  A ++ GKQ+H +   +++PS
Sbjct: 440 GYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPS 499

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
            +   + NS++DMY KCG +  +  +F+ M  + V++W  ++ GY KHG  +E + LF  
Sbjct: 500 FV--VLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTL 557

Query: 409 MLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGR 466
           M  +  V+PD V  LAVLS CSH GL ++    F+ + + K  ++P++EHY C+VD LGR
Sbjct: 558 MREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGR 617

Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
           +GR++EA   I+ MP +P+ AIW +LL ACRVH ++++G   G+ LL ++  N  NYV++
Sbjct: 618 SGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVIL 677

Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SN++A AG W +   LR L   K + K  GRS +E+D+ +H F+  D +HP  E+I   +
Sbjct: 678 SNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKV 737

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-I 645
            E+    K E+G+V  +   LHD+ EE KE+ L  HSEKLA+       GL   P  V I
Sbjct: 738 KELSTSFK-EVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSF-----GLIASPASVPI 791

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           RV KNLR+C DCH F K +SK+      +RD  RFHR  GG CSC DYW
Sbjct: 792 RVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 217/421 (51%), Gaps = 29/421 (6%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++H  ++K  +   + L   LI +Y KC  +  A  VFD+M ERNVVSWTA++  + Q
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321

Query: 91  NGNAKACLSLF---CQMGSSSV------------------KPNEFTLSTNIKASGVLSSV 129
            G A   L+LF    ++  + V                  +PNEFT +T + +       
Sbjct: 322 RGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGF 381

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             G QIH + +K  +E +  VG+S++DMY+K G+I+EA  +F+ +P + +++  A+I+GY
Sbjct: 382 ILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY 441

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G  ++ L LFR++Q  G   +  T+T  L A   L ++  G Q+H  ++ S  P  V
Sbjct: 442 AQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFV 501

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
             V+  SL+D Y KCG L  +RR+FD + +++VISW+++++GY++     E ++LF  +R
Sbjct: 502 --VLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMR 559

Query: 310 ERS-LQVDGFVLSSMMGVFADFALVEQGKQI--HAYAAKVPSGLDTSVSNSIVDMYLKCG 366
           E + ++ D   + +++   +   L ++G  I     + K+           +VD+  + G
Sbjct: 560 EETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSG 619

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
            ++EA E   +MP +     W  ++     H  +   +G F    L ++EP       +L
Sbjct: 620 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVH--SNVDIGEFAGQQLLEIEPGNAGNYVIL 677

Query: 426 S 426
           S
Sbjct: 678 S 678



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 146/280 (52%), Gaps = 8/280 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A  L  C+ +L    G Q+H  ++K+ +   + + + L+DMYAK G+++ A  VF+ + 
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER+VVS TA++ G+ Q G  +  L LF ++    +K N  T +  + A   L++++ G Q
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   ++S      V+ NS+IDMYSKCG +  + R+FD M  +++I+WNAM+ GY   G 
Sbjct: 488 VHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGE 547

Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             + L LF  M+E  ++ PD  T  + L  C   G    G  I   + +       K   
Sbjct: 548 GREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEH 607

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIE----QKSVISWSSLI 289
            G +VD   + G + EA   F+ I+    + +   W SL+
Sbjct: 608 YGCVVDLLGRSGRVEEA---FEFIKKMPFEPTAAIWGSLL 644


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/710 (33%), Positives = 388/710 (54%), Gaps = 31/710 (4%)

Query: 5   SFSLVSERQRLADS------LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
           +FSL  E     DS      L+ C +N        +H  +VK G   D  L++ L+ +YA
Sbjct: 60  AFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYA 119

Query: 59  KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLS 117
           KCG M  A  VFD M  RN V+WT LM G++QN   K  + LF +M   S   P+ +TL+
Sbjct: 120 KCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLA 179

Query: 118 TNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-RINEAARMFDVMPA 176
             + A   L S++ G Q+H   +K   +++  +GN++  +Y+KCG ++      F  +  
Sbjct: 180 IALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKE 239

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           K +I+W A I+     G + KG+ +F +M   E    P+E+T TS L  C  +  +  G 
Sbjct: 240 KDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGI 299

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+H      G+  +++  +  SL+  Y+KCGC+VEA+R+F  +   ++++W+++I G+AQ
Sbjct: 300 QVHALCTKLGYESNLR--VRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQ 357

Query: 295 -----EENLA------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
                ++NL+      EA+ LF +L    ++ D F  SS++ V +    +EQG+QIHA  
Sbjct: 358 MMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHART 417

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     D  V +S+++MY KCG I+ A+++F EM ++ ++ WT +ITG+ +HG +K+A+
Sbjct: 418 IKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQAL 477

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
            LF  M L  + P+ V ++ VLSAC  +G+V E+  YF  +  + ++KP ++HY C+VD 
Sbjct: 478 NLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDM 537

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           L R G++ EA +LI+ M  K S  IW  L+  C   G+LELG +  E LL L   +   Y
Sbjct: 538 LVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETY 597

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
            ++ N +  AG +++  R+  + R + + ++   SW+ +   ++ F   D    +   I 
Sbjct: 598 KLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKA-DIESSIG 656

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV-HSEKLAIGLALVRGGLNEQPG 642
           + L ++  + K  LG+   ++Y     +E+ K  S  + HSEKLAI   L     N  P 
Sbjct: 657 KSLEDLHIKAK-NLGYEM-LEYVEKSDKEKEKTSSPTIYHSEKLAITFGL-ENLPNSSP- 712

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
             +RV KN  +C D H F+K +S +     +V+D+ R H+F  G CSCG+
Sbjct: 713 --VRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFVNGQCSCGN 760


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/569 (36%), Positives = 333/569 (58%), Gaps = 8/569 (1%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L S+    ++    + SG + +  + N ++ M+ KCG + +A R+FD MP K++++WN +
Sbjct: 144 LKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTI 203

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I G V AG   +   LF  M +         F + ++A   LG +  G Q+H   + +G 
Sbjct: 204 IGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGV 263

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   +A +L+D Y KCG + +A+ VFD + +K+ + W+S+I GYA      EA+ ++
Sbjct: 264 GGDV--FVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMY 321

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R+  +++D F  S ++ + A  A +E  KQ HA   +   GLD   + ++VD+Y K 
Sbjct: 322 YEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKW 381

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G I++A  +F+ MP KNV++W  +I GYG HG   EAV +F +ML + + P+ V +LAVL
Sbjct: 382 GRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVL 441

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACS+SGL +   E F  +  D ++KPR  HY+C+++ LGR G LDEA  LI+  P KP+
Sbjct: 442 SACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPT 501

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
           + +W  LL+ACRVH + ELG+   E L  +  +   NYV++ NI+  +G   E   + + 
Sbjct: 502 VNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQT 561

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            + +GL+ +   SW+E+ K+ + F  GD  H  +++I+Q L E+   + +  G+V   K+
Sbjct: 562 LKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKH-GYVPQDKF 620

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            L D+ E+ +E  L  HSEKLAI   L+    N      +++ ++ R+CGDCH  IK ++
Sbjct: 621 LLPDVDEQ-EERVLLYHSEKLAIAFGLI----NTSDWTPLQIVQSHRICGDCHSAIKLIA 675

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            + +   VVRDA+RFH F+ G CSCGDYW
Sbjct: 676 LVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 210/406 (51%), Gaps = 13/406 (3%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           ++  G   D  L N ++ M+ KCG M  A  +FD+M E+N++SW  ++ G +  G+    
Sbjct: 157 MINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEA 216

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
             LF  M             T I+AS  L  +  G Q+H   +K+G   +  V  ++IDM
Sbjct: 217 FRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDM 276

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           YSKCG I +A  +FD MP K+ + WN++IAGY L GYS++ L ++ +M++ G   D FTF
Sbjct: 277 YSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTF 336

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
           +  ++ C  L S+    Q H  L+  GF   +  V   +LVD Y K G + +A+ VFD++
Sbjct: 337 SIIIRICARLASLEHAKQAHAGLVRHGF--GLDIVANTALVDLYSKWGRIEDAKHVFDMM 394

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K+VISW++LI GY       EA+E+F ++    +  +     +++   +   L ++G 
Sbjct: 395 PHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGW 454

Query: 338 QIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG 392
           +I    ++     P  +  +    ++++  + GL+DEA  L  + P K  V  W  ++T 
Sbjct: 455 EIFESMSRDHKIKPRAMHYAC---MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEES 437
              H      +G F    L  + P+ ++ Y+ +L+  + SG +EE+
Sbjct: 512 CRVH--KNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEA 555



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 123/210 (58%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+  G QLH   +K G   D+ +   LIDMY+KCG +  A  VFD+M E+  V W +++ 
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  +G ++  LS++ +M  S VK + FT S  I+    L+S+E+  Q H   ++ GF  
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           + V   +++D+YSK GRI +A  +FD+MP K++I+WNA+IAGY   G   + + +F +M 
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERML 426

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
             G +P+  TF + L AC   G    G +I
Sbjct: 427 HEGMVPNHVTFLAVLSACSYSGLSDRGWEI 456



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C++   L++  Q H  LV+ GF  D++ N  L+D+Y+K G +  A  VFD M  +NV
Sbjct: 340 IRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNV 399

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           +SW AL+ G+  +G     + +F +M    + PN  T    + A       + G +I   
Sbjct: 400 ISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           M      +   +    +I++  + G ++EA  +    P K  +  W A++  
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 235/700 (33%), Positives = 378/700 (54%), Gaps = 35/700 (5%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++   A +L  CS++  L  G  +HG ++  G    ++L N LIDMY+KCG+++ A  +F
Sbjct: 159 DKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILF 218

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D   + + VSW +L+ G++QNG  +  L++  +M  + +  N +TL + +KA    SS  
Sbjct: 219 DHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKAC---SSNF 275

Query: 131 NGMQ-----IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           NG +     +H   +K G   + VVG +++DMY+K G +++A ++FD M  K+++ +NAM
Sbjct: 276 NGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAM 335

Query: 186 IAGYVLAGYSD-----KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +AG +     +     K L LF +M+  G  P  FT++S LKAC  +       Q+H  +
Sbjct: 336 MAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALM 395

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
             +G        I   L+D Y   G +++A   F+ I   +++  +++I GY Q      
Sbjct: 396 CKNGLL--SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFES 453

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ LF +L     + D F+ S++M   A+  ++  G+QI  +A KV     T   NS + 
Sbjct: 454 ALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIW 513

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY K G +  A   F +M   ++V+W+ +I    +HG A EA+  F  M    +EP+  A
Sbjct: 514 MYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFA 573

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +L VL ACSH GLVEE   YF  +  D +MK  ++H  C+VD LGRAGRL +A++LI  +
Sbjct: 574 FLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRL 633

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
             +    +W+ LLSACR+H D    + V + ++ L+     +YV++ NI+ DAG+     
Sbjct: 634 GFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAAS 693

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM---EKRM---K 594
           ++R L   + +KK  G SW+++  +++ F  GD +H  + +I+  L EM    KR+   K
Sbjct: 694 KVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAK 753

Query: 595 EELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVC 654
           + LG+            E     ++  HSEKLA+      G L       +RV KNLR+C
Sbjct: 754 DILGYKI----------EHEHLTNVNYHSEKLAVAF----GVLYLSESAPVRVMKNLRIC 799

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  +K  S + K   +VRD+ RFH F+ G CSCGDYW
Sbjct: 800 LDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 250/487 (51%), Gaps = 25/487 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L++G  +H  ++K  F   L L N+L++MY KCG+   A  +FDKM + N+V++ +L+ G
Sbjct: 75  LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           ++Q  N    + LF +     +K +++T +  + A     ++  G  IHG+ +  G    
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQ 194

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            V+ NS+IDMYSKCG+++ A  +FD       ++WN++IAGYV  G  ++ L + +KM +
Sbjct: 195 VVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQ 254

Query: 208 HGEIPDEFTFTSTLKACGS--LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +G   + +T  S LKAC S   G    GT +H   I  G    V  V+  +L+D Y K G
Sbjct: 255 NGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV--VVGTALLDMYAKTG 312

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-----AMELFRQLRERSLQVDGFVL 320
            L +A ++FD +  K+V+ +++++ G  Q+E + +     A+ LF +++   ++   F  
Sbjct: 313 SLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTY 372

Query: 321 SSMMG---VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           SS++    +  DF      KQ+HA   K     D  + + ++D+Y   G + +A   FN 
Sbjct: 373 SSLLKACIIVEDFKF---AKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 429

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +    +V  T +I GY ++G  + A+ LF ++L  + +PD      ++S+C++ G++   
Sbjct: 430 IHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDS----LGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++           K  I  ++   +S      ++G L  A NL       P I  W T++
Sbjct: 490 EQ-----IQGHATKVGISRFTIFQNSQIWMYAKSGDL-YAANLTFQQMENPDIVSWSTMI 543

Query: 494 SACRVHG 500
            +   HG
Sbjct: 544 CSNAQHG 550


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/650 (34%), Positives = 350/650 (53%), Gaps = 49/650 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I    +CG+MN A  +FD+M ER+VVSWTA++ G  ++G       LF QM 
Sbjct: 96  DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                                             +K    WN     S++  Y + G+++
Sbjct: 156 ----------------------------------VKDTAAWN-----SMVHGYLQFGKVD 176

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +A ++F  MP K++I+W  MI G      S + L LF+ M           FT  + AC 
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +  +   G Q+HG +I  GF Y  +  ++ SL+ FY  C  + ++R+VFD    + V  W
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLY--EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           ++L+ GY+  +   +A+ +F  +   S+  +    +S +   +    ++ GK++H  A K
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
           +    D  V NS+V MY   G +++A  +F ++  K++V+W  II G  +HG  K A  +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND-KRMKPRIEHYSCIVDSL 464
           F +M+  + EPD + +  +LSACSH G +E+ ++ F  + +    +  +I+HY+C+VD L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474

Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
           GR G+L EA+ LIE M VKP+  +W  LLSACR+H D++ G +    +  LD  +   YV
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           ++SNI+A AG W+   +LR   +  G+ K  G SWV +  + H F+ GD  H    +I++
Sbjct: 535 LLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYE 592

Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
            L  + +++K ELG+    + ALHD+++E KEE L  HSE+LAI   L+    N   G  
Sbjct: 593 KLEFLREKLK-ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLI----NTVEGSA 647

Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           + V KNLRVC DCH  IK +S ++    V+RD  RFH F+ G CSCGDYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 150/273 (54%), Gaps = 3/273 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+       G+Q+HG ++K+GF ++  ++  LI  YA C  +  +  VFD+ +   V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
             WTAL+ G+  N   +  LS+F  M  +S+ PN+ T ++ + +   L +++ G ++HG+
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E +  VGNS++ MYS  G +N+A  +F  +  KS+++WN++I G    G     
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-L 257
            ++F +M    + PDE TFT  L AC   G +  G ++  + ++SG  +  + +   + +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCM 470

Query: 258 VDFYVKCGCLVEARRVFD-LIEQKSVISWSSLI 289
           VD   +CG L EA  + + ++ + + + W +L+
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 5/196 (2%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S++  +   A  L  CS    LD+G ++HG  VK+G   D  + N L+ MY+  G +N A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +VF K+ ++++VSW +++ G  Q+G  K    +F QM   + +P+E T +  + A    
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440

Query: 127 SSVENGMQIHGMCMKSG---FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITW 182
             +E G ++    M SG    +        ++D+  +CG++ EA  + + M  K + + W
Sbjct: 441 GFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVW 499

Query: 183 NAMIAGYVLAGYSDKG 198
            A+++   +    D+G
Sbjct: 500 LALLSACRMHSDVDRG 515



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 144/321 (44%), Gaps = 39/321 (12%)

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL-----QVDGFV---- 319
           EAR VF+ +    V  ++ +I GY +   L +A+ LF ++  R +      + G V    
Sbjct: 53  EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD 112

Query: 320 LSSMMGVFADF---------ALV----EQGK--QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           +++ + +F +          A+V      GK  Q      ++P   DT+  NS+V  YL+
Sbjct: 113 MNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGYLQ 171

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            G +D+A +LF +MP KNV++WT +I G  ++  + EA+ LF+ ML   ++     +  V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPV 482
           ++AC+++       +    +    ++    E Y  + ++       R+ +++ + +   V
Sbjct: 232 ITACANAPAFHMGIQVHGLII---KLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KV 287

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
              +A+W  LLS   ++   E    +   +LR          ++ N    A   N C  L
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS--------ILPNQSTFASGLNSCSAL 339

Query: 543 RKLARSKGLKKVAGRSWVEVD 563
             L   K +  VA +  +E D
Sbjct: 340 GTLDWGKEMHGVAVKLGLETD 360



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 17/161 (10%)

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           IDEA E+FN++P  +V  +T +ITGY +     +A+ LF +M + DV    V++ +++S 
Sbjct: 51  IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISG 106

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           C   G +  + + F     D+  +  +  ++ +V+   R+G++D+A+ L   MPVK + A
Sbjct: 107 CVECGDMNTAVKLF-----DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT-A 160

Query: 488 IWQTLLSACRVHGDLELGR--EVGEILLRLDGDNPVNYVMM 526
            W ++     VHG L+ G+  +  ++  ++ G N +++  M
Sbjct: 161 AWNSM-----VHGYLQFGKVDDALKLFKQMPGKNVISWTTM 196


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 321/568 (56%), Gaps = 30/568 (5%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++  G Q+H   + +G+     +   ++ MY++CG + +A  + D MP +++++W AMI+
Sbjct: 50  ALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMIS 109

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY      D+   LF  M   G                    +    Q+H F + + F  
Sbjct: 110 GYSQNERPDQAWELFIMMLRAG--------------------IHQVKQVHAFAVKTNF-- 147

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +   +  SL+D Y K   + EARRVFD++  + V+S+++++ GY Q     EA++LFR 
Sbjct: 148 ELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRL 207

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
           L    +Q +    ++++   +  + ++ GKQ+H    +       ++ NS++DMY KCG 
Sbjct: 208 LYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGK 267

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +  +  +F+ MP ++VV+W  ++ GYG+HGLA E V LFR M  D+V+PD V  LAVLS 
Sbjct: 268 LLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMC-DEVKPDSVTLLAVLSG 326

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
            SH GLV+E  + F  +  ++      EHY C++D LGR+G+L +A NLIE MP +P+ A
Sbjct: 327 YSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRA 386

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           IW +LL ACRVH ++ +G  V + LL ++ +N  NYV++SNI+A AG W +  R+RKL  
Sbjct: 387 IWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLML 446

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            K + K  GRSW+ +DK IH F+  +  HP  E I+  + E+   +K   GFV  +   L
Sbjct: 447 KKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAA-GFVPDLSCVL 505

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSK 666
           HD+ +E KE  L  HSEKLAI       GL   P  + I+V KNLR+C DCH F K +SK
Sbjct: 506 HDVDDEQKERMLLGHSEKLAITF-----GLMSTPSDLTIQVMKNLRICVDCHNFAKFVSK 560

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +      +RD  RFH    G C+CGDYW
Sbjct: 561 VYGREISLRDKNRFHLITEGACTCGDYW 588



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 214/412 (51%), Gaps = 27/412 (6%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D++  C +   L  G Q+H  +V  G+   L L   L+ MYA+CG +  A  V D M ER
Sbjct: 40  DAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPER 99

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVSWTA++ G+ QN        LF  M                    + + +    Q+H
Sbjct: 100 NVVSWTAMISGYSQNERPDQAWELFIMM--------------------LRAGIHQVKQVH 139

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K+ FE +  VG+S++DMY+K   I EA R+FD++PA+ ++++ A+++GY   G  +
Sbjct: 140 AFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDE 199

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LFR +   G   ++ TFT+ L A   L S+  G Q+HG ++    P+ +   +  S
Sbjct: 200 EALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFM--ALQNS 257

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y KCG L+ +RRVFD + ++SV+SW+++++GY +     E ++LFR + +  ++ D
Sbjct: 258 LIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPD 316

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG-LDTSVSNSIVDMYLKCGLIDEATELF 375
              L +++  ++   LV++G  +  +  K  S  L+T     ++D+  + G + +A  L 
Sbjct: 317 SVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLI 376

Query: 376 NEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +MP +     W  ++     H      VG F    L D+EP+      +LS
Sbjct: 377 EKMPFQPTRAIWGSLLGACRVH--TNVHVGEFVAQKLLDIEPENAGNYVILS 426


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 228/670 (34%), Positives = 355/670 (52%), Gaps = 48/670 (7%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  +H  +V+    FD++  N+LI +Y KCG +  A  VFD M  RN VS   LM G
Sbjct: 32  LSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +  +G  +  L+L   +  +    NE+ LS+ + A+  + S + G Q HG  +K+G   +
Sbjct: 91  YASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEH 147

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
           P V ++++ MY +C  ++EA +                        YS K          
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVK------------------------YSKK---------- 173

Query: 208 HGEIPDEF---TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           HGE             L  C S   V  G+Q+H   +      +V   +  +LVD Y KC
Sbjct: 174 HGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNV--YVGSALVDMYGKC 231

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
               EA RVF+++ +K+++SW++++  Y Q E   +A++LF  +    ++ + F  +  +
Sbjct: 232 DFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVAL 291

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              A  A ++ G  + A   K        V N++++MY K G +++A  +F  MP ++VV
Sbjct: 292 NSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVV 351

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +W  II GY  HG A+EA+  F  ML  +  P  V ++ VLSAC+  GLV+E   Y + +
Sbjct: 352 SWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIM 411

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
             +  +KP  EHY+C+V  L R GRLDEA+  IES  +   +  W++LLS+C+V+ +  L
Sbjct: 412 MKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGL 471

Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
           G  V E + +L   +   YV++SN++A A  W+   ++R+L R  G++K  G SW++V  
Sbjct: 472 GHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGS 531

Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
           E+H F   D  HP  E+I + L E+  ++K  +G+V  +  ALHD+++E KEE L  HSE
Sbjct: 532 EVHVFTSEDKKHPYMEQITKKLQELIDKIK-VIGYVPNIAVALHDVEDEQKEEHLMYHSE 590

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLA+   L+R       G+ IR+ KN+R+C DCH  IK +S       VVRD  RFH  E
Sbjct: 591 KLALAFGLIR----TPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIE 646

Query: 685 GGVCSCGDYW 694
            GVCSC DYW
Sbjct: 647 DGVCSCDDYW 656



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+    +  G Q+H   +K     ++ + + L+DMY KC   + A  VF+ + E+N+VSW
Sbjct: 193 CASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSW 252

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
           TA+M  + QN   +  L LF  M    V+PNEFT +  + +   L++++NG  +    MK
Sbjct: 253 TAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMK 312

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           +G      V N++++MYSK G + +A R+F  MP + +++WN++I GY   G + + +  
Sbjct: 313 TGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEA 372

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
           F  M    E+P   TF   L AC  LG V  G
Sbjct: 373 FHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 404



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A +L  C+    L  G  L    +K G    L + N L++MY+K G +  A  VF  M  
Sbjct: 288 AVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPC 347

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW +++ G+  +G A+  +  F  M  +   P+  T    + A   L  V+ G   
Sbjct: 348 RDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYY 407

Query: 136 HGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMF-------DVMPAKSLIT 181
             + MK  G +        ++ +  + GR++EA R         DV+  +SL++
Sbjct: 408 LNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLS 461


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/586 (34%), Positives = 332/586 (56%), Gaps = 3/586 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+ +  L  G QLH   VK G   ++ + N L+ MYAKC  ++ A  +F+ M 
Sbjct: 245 LACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP 304

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           + ++V+W  ++ G +QNG       LF  M  S  +P+  TL + + A   L+ ++ G +
Sbjct: 305 QDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKE 364

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +HG  +++    +  + ++++D+Y KC  +  A  ++D   A  ++  + MI+GYVL G 
Sbjct: 365 VHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGM 424

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S++ L +FR + E    P+  T  S L  C S+ ++  G QIHG+++ +   Y  K  + 
Sbjct: 425 SEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNA--YERKCYVE 482

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG L  +  +F  + QK  ++W+S+I  ++Q     EA++LFRQ+    ++
Sbjct: 483 SALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIK 542

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   +S+ +   A    +  GK+IH    K P   D    ++++DMY KCG ++ A  +
Sbjct: 543 YNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRV 602

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  MP KN V+W  II+ YG HGL KE+V L   M  +  +PD V +LA++SAC+H+GLV
Sbjct: 603 FEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLV 662

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           EE  + F  +     + PR+EH++C+VD   R+G+LD+A   I  MP KP   IW  LL 
Sbjct: 663 EEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLH 722

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVH ++EL     + L +LD  N   YV+MSNI+A AG W+   ++R+L +   + K+
Sbjct: 723 ACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKI 782

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            G SWV+V+   H F   D +HP +E I+  L  + + ++EE G+V
Sbjct: 783 PGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREE-GYV 827



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 251/482 (52%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    +  G  +H     +G + D+ + + L+ MYA  G +  A   FD + ER+ 
Sbjct: 148 VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDC 207

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  +M G ++ G+    + LF  M +S  +PN  TL+  +      + + +G Q+H +
Sbjct: 208 VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    V N+++ MY+KC  +++A R+F++MP   L+TWN MI+G V  G   + 
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEA 327

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
             LF  MQ  G  PD  T  S L A   L  +  G ++HG+++ +    ++   +  +LV
Sbjct: 328 FGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCV--NMDVFLVSALV 385

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A+ ++D      V+  S++I GY       EA+++FR L E+ ++ +  
Sbjct: 386 DIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAV 445

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  A +  G+QIH Y  +        V ++++DMY KCG +D +  +F +M
Sbjct: 446 TIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKM 505

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ VTW  +I+ + ++G  +EA+ LFR+M ++ ++ + +   A LSAC+    +   +
Sbjct: 506 SQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGK 565

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E          +K  I   S ++D   + G L+ A  + E MP K  ++ W +++SA   
Sbjct: 566 EIHGVTIKGP-IKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISAYGA 623

Query: 499 HG 500
           HG
Sbjct: 624 HG 625



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 235/501 (46%), Gaps = 14/501 (2%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFD---LMLNNDLIDMYAKCGEMNG 65
           VS   RL   LR C     L  G+Q+H   V  G   D   L L+  L+ MY        
Sbjct: 29  VSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRD 88

Query: 66  ACAVFDKMLERNVVS---WTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNI 120
           A AVF  +      S   W  L+ GF   G     +  + +M S  ++  P+  TL   +
Sbjct: 89  AVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVV 148

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           K+   L ++  G  +H      G   +  VG++++ MY+  G +  A   FD +P +  +
Sbjct: 149 KSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCV 208

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
            WN M+ G + AG  D  + LFR M+  G  P+  T    L  C +   +  G Q+H   
Sbjct: 209 LWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLA 268

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +  G    V   +A +L+  Y KC CL +A R+F+L+ Q  +++W+ +I G  Q     E
Sbjct: 269 VKCGLEPEV--AVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVE 326

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A  LF  ++    + D   L S++    D   ++QGK++H Y  +    +D  + +++VD
Sbjct: 327 AFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVD 386

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           +Y KC  +  A  L++     +VV  + +I+GY  +G+++EA+ +FR +L   ++P+ V 
Sbjct: 387 IYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVT 446

Query: 421 YLAVLSACSHSGLVEESQEYFSR-LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
             +VL  C+    +   Q+     L N    K  +E  S ++D   + GRLD +  +   
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLK 504

Query: 480 MPVKPSIAIWQTLLSACRVHG 500
           M  K  +  W +++S+   +G
Sbjct: 505 MSQKDEVT-WNSMISSFSQNG 524


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/616 (34%), Positives = 353/616 (57%), Gaps = 36/616 (5%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           ++F+    +KA   +S++  GM++HG+  K     +P V    +DMY+ CGRIN A  +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169

Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
           D M  + ++TWN MI  Y   G  D+   LF +M++   +PDE    + + ACG  G++ 
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229

Query: 232 GGTQIHGFLITSGF----------------------------PYSVKTV-IAGSLVDFYV 262
               I+ FLI +                                SV+ + ++ ++V  Y 
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           KCG L +A+ +FD  E+K ++ W+++I  Y + +   EA+ +F ++    ++ D   + S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++   A+  ++++ K +H+      +GL++  S++N++++MY KCG +D   ++F +MP 
Sbjct: 350 VISACANLGILDKAKWVHSCIH--VNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           +NVV+W+ +I     HG A +A+ LF +M  ++VEP+ V ++ VL  CSHSGLVEE ++ 
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F+ + ++  + P++EHY C+VD  GRA  L EA  +IESMPV  ++ IW +L+SACR+HG
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           +LELG+   + +L L+ D+    V+MSNI+A    W +   +R++   K + K  G S +
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           + + + H F  GD  H  + +I+  L E+  ++K   G+V      L D++EE K++ + 
Sbjct: 588 DQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA-GYVPDCGSVLVDVEEEEKKDLVL 646

Query: 621 VHSEKLAIGLALVRGGLNEQPGK--VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
            HSEKLA+   L+     E+     VIR+ KNLRVC DCH F K +SK+ +   +VRD T
Sbjct: 647 WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRT 706

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH ++ G+CSC DYW
Sbjct: 707 RFHCYKNGLCSCRDYW 722



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 213/443 (48%), Gaps = 41/443 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+  SK   L  G++LHG   K+    D  +    +DMYA CG +N A  VFD+M  R+V
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---------- 128
           V+W  ++  + + G       LF +M  S+V P+E  L   + A G   +          
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237

Query: 129 -VENG--MQIHGM-----------CMKSGFEW-------NPVVGNSIIDMYSKCGRINEA 167
            +EN   M  H +           CM    E+       N  V  +++  YSKCGR+++A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +FD    K L+ W  MI+ YV + Y  + L +F +M   G  PD  +  S + AC +L
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 357

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
           G +     +H  +  +G    +   I  +L++ Y KCG L   R VF+ + +++V+SWSS
Sbjct: 358 GILDKAKWVHSCIHVNGLESELS--INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA--- 344
           +I   +     ++A+ LF ++++ +++ +      ++   +   LVE+GK+I A      
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAV 403
            +   L+      +VD++ +  L+ EA E+   MPV  NVV W  +++    HG  +  +
Sbjct: 476 NITPKLEH--YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG--ELEL 531

Query: 404 GLFRKMLLDDVEPDGVAYLAVLS 426
           G F    + ++EPD    L ++S
Sbjct: 532 GKFAAKRILELEPDHDGALVLMS 554



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 176/367 (47%), Gaps = 36/367 (9%)

Query: 167 AARMFDVMPAKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           A  +F  +P+    I +N  +     +      +L +++++  G   D+F+F   LKA  
Sbjct: 63  ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            + ++  G ++HG  +           +    +D Y  CG +  AR VFD +  + V++W
Sbjct: 123 KVSALFEGMELHG--VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I  Y +   + EA +LF ++++ ++  D  +L +++        +   + I+ +  +
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240

Query: 346 VPSGLDTSVSNSIVDMYL-------------------------------KCGLIDEATEL 374
               +DT +  ++V MY                                KCG +D+A  +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F++   K++V WT +I+ Y +    +EA+ +F +M    ++PD V+  +V+SAC++ G++
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++++ +     +   ++  +   + +++   + G LD  +++ E MP + ++  W ++++
Sbjct: 361 DKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMIN 418

Query: 495 ACRVHGD 501
           A  +HG+
Sbjct: 419 ALSMHGE 425


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 234/699 (33%), Positives = 366/699 (52%), Gaps = 86/699 (12%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LERNVVSWTALMCGF 88
           G+  H  ++K+G   D  + N +IDMYA+ G +  A  VFD++   ER V  W A++ G+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            +  +      LF       V P                                 E N 
Sbjct: 174 WKWESEGQAQWLF------DVMP---------------------------------ERNV 194

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +   +++  Y+K   +  A R FD MP +S+++WNAM++GY   G +++ L LF +M   
Sbjct: 195 ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNA 254

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  PDE T+ + + AC S G       +   L        +   +  +L+D Y KCG + 
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQI--QLNCFVRTALLDMYAKCGSIG 312

Query: 269 EARRVFD--------------------------------LIEQKSVISWSSLILGYAQEE 296
            ARR+FD                                 +  ++V++W+S+I GYAQ  
Sbjct: 313 AARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNG 372

Query: 297 NLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
             A A+ELF+++   + L  D   + S++        +E G  +  +  +    L  S  
Sbjct: 373 QSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH 432

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+++ MY +CG +++A  +F EM  ++VV++  +I+G+  HG   EA+ L   M    +E
Sbjct: 433 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 492

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           PD V ++ VL+ACSH+GL+EE ++ F  + +     P I+HY+C+VD LGR G L++AK 
Sbjct: 493 PDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKR 547

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            +E MP++P   ++ +LL+A R+H  +ELG      L  L+ DN  N++++SNI+A AG 
Sbjct: 548 TMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGR 607

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           W + ER+R+  +  G+KK  G SWVE   ++H F   D +H  ++ I+Q+L+E+ K+M+E
Sbjct: 608 WKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMRE 667

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
             G++      L D++EE KEE +  HSEKLAI  AL    L  + G VIRV KNLRVC 
Sbjct: 668 A-GYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYAL----LVSEAGAVIRVVKNLRVCW 722

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH  IK +SK+   V +VRD  RFH F  G+CSC DYW
Sbjct: 723 DCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/665 (33%), Positives = 361/665 (54%), Gaps = 43/665 (6%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
           +H  ++K G        + LI+        +G   A +VF+ + E N++ W  +  G   
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + +  + L L+  M S  + PN +T    +K+     + + G QIHG  +K G + +  V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
             S+I MY + GR                               I  A +MFD +P K +
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WNAMI+GY   G   + L LF+ M +    PDE T  + + AC   GS+  G Q+H +
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +   GF  ++K  I  +L+D Y KCG L  A  +F+ +  K VISW++LI GY       
Sbjct: 249 IDDHGFGSNLK--IVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNS 357
           EA+ LF+++       +   + S++   A    ++ G+ IH Y  K   G+   +S+  S
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++DMY KCG I+ A ++FN +  K++ +W  +I G+  HG A  +  +F +M  + +EPD
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD 426

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +LSACSHSG+++  +  F  +  D +M P++EHY C++D LG +G   EA+ +I
Sbjct: 427 DITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 486

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
            +M ++P   IW +LL AC++HG++ELG    + L++++ +NP +YV++SNI+A AG WN
Sbjct: 487 NTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWN 546

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           E    R L   KG+KKV G S +E+D  +H F  GD  HP   +I+ +L EME  ++E  
Sbjct: 547 EVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEA- 605

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           GFV      L +++EE KE +LR HSEKLAI   L+    + +PG  + + KNLRVC +C
Sbjct: 606 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 661

Query: 658 HEFIK 662
           HE  K
Sbjct: 662 HEAYK 666



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 233/508 (45%), Gaps = 76/508 (14%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           +S  L+         L+ C+K+     G Q+HG ++K+G   DL ++  LI MY + G +
Sbjct: 83  ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 142

Query: 64  NGACAVFDKMLERNVVS-------------------------------WTALMCGFLQNG 92
             A  VFD+   R+VVS                               W A++ G+ + G
Sbjct: 143 EDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETG 202

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N K  L LF  M  ++V+P+E T+ T + A     S+E G Q+H      GF  N  + N
Sbjct: 203 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 262

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++ID+YSKCG +  A  +F+ +P K +I+WN +I GY       + LLLF++M   GE P
Sbjct: 263 ALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 322

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           ++ T  S L AC  LG++  G  IH ++       +  + +  SL+D Y KCG +  A +
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQ 382

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+ I  KS+ SW+++I G+A       + ++F ++R+  ++ D            D   
Sbjct: 383 VFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPD------------DITF 430

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-----WT 387
           V               GL ++ S+S        G++D    +F  M     +T     + 
Sbjct: 431 V---------------GLLSACSHS--------GMLDLGRHIFRSMTQDYKMTPKLEHYG 467

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            +I   G  GL KEA  +   M   ++EPDGV + ++L AC   G VE  + +   L   
Sbjct: 468 CMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 524

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           +   P    Y  + +    AGR +E  N
Sbjct: 525 EPENPG--SYVLLSNIYATAGRWNEVAN 550


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/604 (34%), Positives = 336/604 (55%), Gaps = 42/604 (6%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L+ ++ G Q+H   +  G +   +VG+ ++  Y+  G I+ +  +F+ +   S + +N+M
Sbjct: 83  LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I  Y   G++++ +  +  M   G   D FTF   LK+   L SV  G  +HG ++  G 
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGL 202

Query: 246 PYSVKTVIAGSLVDFYVKCG-------------------------------CLVEARRVF 274
            + +   +A SL+  Y KCG                               C+  A  +F
Sbjct: 203 QFDL--YVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIF 260

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQL--RERSLQVDGFVLSSMMGVFADFAL 332
           + +  ++++SW+++I GY+Q     +A+ LF ++   +  ++ +   + S++   A  + 
Sbjct: 261 ERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLST 320

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV--KNVVTWTVII 390
           +E+G+QIH  A ++    + SV  ++  MY KCG + +A   F+++    KN++ W  +I
Sbjct: 321 LERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 380

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T Y  +G   +AV  FR+M+   ++PD + +  +LS CSHSGLV+   +YF+ +     +
Sbjct: 381 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSI 440

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            PR+EHY+C+ D LGRAGRL EA  L+  MP+    +IW +LL+ACR H +LE+      
Sbjct: 441 NPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAAR 500

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L  L+ +N  NYV++SN++A+AG W E ++LR + +S+G KK  G SW+E++ + H F 
Sbjct: 501 KLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFL 560

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
           GGD +HP  ++I+  L  + ++MK   G+     Y LHDI EE KE +L  HSEKLA+  
Sbjct: 561 GGDTSHPQGKEIYMFLEALPEKMKAA-GYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAF 619

Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
               G LN     V+RV KNLR+CGDCH  +  +S+I     +VRD  RFH F+GG CSC
Sbjct: 620 ----GILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSC 675

Query: 691 GDYW 694
           GDYW
Sbjct: 676 GDYW 679



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 210/438 (47%), Gaps = 43/438 (9%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +L  G Q+H  ++  G     ++ + ++  YA  G+++ + +VF+ + E + + + +++ 
Sbjct: 85  MLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            + + G A+  ++ +  M S     + FT    +K+S  L SV  G  +HG+ ++ G ++
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM- 205
           +  V  S+I +Y KCG IN+A ++FD M  + + +WNA++AGY  +G  D  L +F +M 
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264

Query: 206 --------------------------------QEHGEIPDEFTFTSTLKACGSLGSVGGG 233
                                           ++ G  P+  T  S L AC  L ++  G
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324

Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI--EQKSVISWSSLILG 291
            QIH      G   +   +IA  L   Y KCG LV+AR  FD +   +K++I+W+++I  
Sbjct: 325 RQIHELACRMGLNSNASVLIA--LTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382

Query: 292 YAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
           YA   +  +A+  FR++ +  +Q D    + ++   +   LV+ G +   + +   S ++
Sbjct: 383 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS-IN 441

Query: 352 TSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRK 408
             V +   + D+  + G + EA++L  EMP+      W  ++    KH   + A    RK
Sbjct: 442 PRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARK 501

Query: 409 MLLDDVEPDGVAYLAVLS 426
           + +  +EP+      +LS
Sbjct: 502 LFV--LEPENTGNYVLLS 517



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 6/175 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM--LER 76
           L  C++   L+ G Q+H    +MG + +  +   L  MYAKCG +  A   FDK+   E+
Sbjct: 312 LPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK 371

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N+++W  ++  +   G+    +S F +M  + ++P++ T +  +        V+ G++  
Sbjct: 372 NLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYF 431

Query: 137 GMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
              M + +  NP V +   + D+  + GR+ EA+++   MP  +  + W +++A 
Sbjct: 432 NH-MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/586 (34%), Positives = 334/586 (56%), Gaps = 10/586 (1%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
           N    +T +++  +  +V  G Q+H   + SG   + V+   ++D+Y+ CG ++ A R+F
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 172 DVMPAK-SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGS 229
           D MP + ++  WN +I  Y   G  +  + L+R+M   G + PD FT+   LKAC +L  
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +G G ++H  ++ +   ++    +   L+D Y KCGC+ EA  VFD    +  + W+S+I
Sbjct: 182 LGAGREVHDRVMRTS--WAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMI 239

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
               Q    AEA+ L R +    +      L S +   AD   + +G+++H Y  +   G
Sbjct: 240 AACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFG 299

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
               +  S++DMY K G +  A  LF+++  + +++W  +I G+G HG A  A  LFR+M
Sbjct: 300 SQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRM 359

Query: 410 LLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
             +  V PD + ++ VLSAC+H G+V+E++E F  +     +KP ++HY+C+VD LG +G
Sbjct: 360 RNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSG 419

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           R  EA ++I+ M VKP   IW  LL+ C++H ++EL       L+ L+ ++  NYV++SN
Sbjct: 420 RFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSN 479

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+A +G W E  R+RKL  ++GLKK+   SW+E+  + H F  GD +HP +++I++ L  
Sbjct: 480 IYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELER 539

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +E  +  + G+V       H+++++ K   +R HSE+LAI   L+    +  PG  + V 
Sbjct: 540 LEG-LISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLI----STPPGTKLLVT 594

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +S+I +   ++RD  R+H F  G CSC D+W
Sbjct: 595 KNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 212/438 (48%), Gaps = 12/438 (2%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C  +  +  G QLH  L+  G   D +L   L+D+YA CG ++ A  +FD+M  
Sbjct: 67  ATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPN 126

Query: 76  R-NVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           + NV  W  L+  + ++G  +A + L+ +M    S++P+ FT    +KA   L  +  G 
Sbjct: 127 QGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGR 186

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   M++ +  +  V   +IDMY+KCG ++EA  +FD    +  + WN+MIA     G
Sbjct: 187 EVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNG 246

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + L L R M   G  P   T  S + A    G++  G ++HG+    GF    K  +
Sbjct: 247 RPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDK--L 304

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERS 312
             SL+D Y K G +  AR +FD +  + +ISW+++I G+    +   A ELFR++R E  
Sbjct: 305 KTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQ 364

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDE 370
           +  D      ++       +V++ K++      V S +   V +   +VD+    G   E
Sbjct: 365 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYS-IKPMVQHYTCLVDVLGHSGRFKE 423

Query: 371 ATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-DGVAYLAVLSAC 428
           A+++   M VK +   W  ++ G   H   + A     K++  ++EP D   Y+ + +  
Sbjct: 424 ASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLI--ELEPEDAGNYVLLSNIY 481

Query: 429 SHSGLVEESQEYFSRLCN 446
           + SG  EE+      + N
Sbjct: 482 AQSGKWEEAARVRKLMTN 499


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 340/572 (59%), Gaps = 7/572 (1%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           ++V +R  ++  L  CS    L+ G Q+H  +++ G   D+ + N LID Y KC  +   
Sbjct: 225 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 284

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
             +FD+M+ +N++SWT ++ G++QN      + LF +M     KP+ F  ++ + + G  
Sbjct: 285 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 344

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            ++E G Q+H   +K+  E +  V N +IDMY+K   + +A ++FDVM  +++I++NAMI
Sbjct: 345 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 404

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY       + L LF +M+     P   TF S L    SL ++    QIHG +I   F 
Sbjct: 405 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK--FG 462

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+      +L+D Y KC  + +AR VF+ + +K ++ W+++  GY Q     EA++L+ 
Sbjct: 463 VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS 522

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLK 364
            L+    + + F  ++++   ++ A +  G+Q H    K+  GLD    V+N++VDMY K
Sbjct: 523 TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM--GLDFCPFVTNALVDMYAK 580

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG I+EA ++FN    ++VV W  +I+ + +HG A+EA+G+FR+M+ + ++P+ V ++AV
Sbjct: 581 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 640

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSACSH+G VE+   +F+ +     +KP  EHY+C+V  LGR+G+L EAK  IE MP++P
Sbjct: 641 LSACSHAGRVEDGLNHFNSMPGFG-IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEP 699

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           +  +W++LLSACR+ G++ELG+   E+ +  D  +  +Y+++SNI A  G W + +++R 
Sbjct: 700 AAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRD 759

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
              S  + K  GRSW+EV+ +++ F   D TH
Sbjct: 760 RMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH 791



 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 271/490 (55%), Gaps = 6/490 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +R C++  +++ G QLHG +V+ GF  D+ +   LID Y+K G +  A  VFD++ 
Sbjct: 132 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS 191

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+  V+WT ++ G+ + G +   L LF QM  ++V P+ + +S+ + A  +L  +E G Q
Sbjct: 192 EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 251

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++ G E +  V N +ID Y+KC R+    ++FD M  K++I+W  MI+GY+   +
Sbjct: 252 IHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSF 311

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + LF +M   G  PD F  TS L +CGS  ++  G Q+H + I +         + 
Sbjct: 312 DWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANL--ESDEFVK 369

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             L+D Y K   L++A++VFD++ +++VIS++++I GY+ +E L+EA+ELF ++R R   
Sbjct: 370 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 429

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                  S++GV A    +E  KQIH    K    LD    ++++D+Y KC  + +A  +
Sbjct: 430 PSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHV 489

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F EM  K++V W  +  GY +H   +EA+ L+  +     +P+   + A+++A S+   +
Sbjct: 490 FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASL 549

Query: 435 EESQEYFSRLCN-DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              Q++ ++L        P + +   +VD   + G ++EA+ +  S  +   +  W +++
Sbjct: 550 RHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMI 606

Query: 494 SACRVHGDLE 503
           S    HG+ E
Sbjct: 607 STHAQHGEAE 616



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/515 (30%), Positives = 277/515 (53%), Gaps = 21/515 (4%)

Query: 7   SLVSERQRLADSLR-CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           +L  +R+  A+ L+   S+N ++ Y + +HG ++  G   D  L N LI++ +K   ++ 
Sbjct: 22  NLRPKRREFANLLQLSISRNPIIHYKI-IHGQIIVSGLQSDTFLANILINVCSKSDRVDN 80

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASG 124
           A  VFDKM  +N+++W++++  + Q G ++  L +F  +   S + PNEF L++ I+A  
Sbjct: 81  ARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACT 140

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L  VE G Q+HG  ++SGF+ +  VG S+ID YSK G I EA  +FD +  K+ +TW  
Sbjct: 141 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 200

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           +IAGY   G S   L LF +M+E   +PD +  +S L AC  L  + GG QIH +++  G
Sbjct: 201 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
               V  V    L+DFY KC  +   R++FD +  K++ISW+++I GY Q     EAM+L
Sbjct: 261 TEMDVSVV--NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 318

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++     + DGF  +S++        +EQG+Q+HAY  K     D  V N ++DMY K
Sbjct: 319 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 378

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
             L+ +A ++F+ M  +NV+++  +I GY       EA+ LF +M +    P  + ++++
Sbjct: 379 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSL 438

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPV 482
           L   +    +E S++    +    +    ++ +  S ++D   +   + +A+++ E M  
Sbjct: 439 LGVSASLFALELSKQIHGLII---KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE 495

Query: 483 KPSIAIWQTLL----------SACRVHGDLELGRE 507
           K  I +W  +            A +++  L+  R+
Sbjct: 496 K-DIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 529


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/665 (32%), Positives = 366/665 (55%), Gaps = 19/665 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           QLH   +K        +++ L+ +YA  +   +  A ++FD + E  +VSW  L+  +++
Sbjct: 33  QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N  +   ++LFC++    V P+ FTL   +K    L +++ G QIHG+ +K GF  +  V
Sbjct: 93  NQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S++ MYSKCG I    ++FD M  K +++WN++I GY   G  +  L +F +M E   
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK-- 209

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             D F++T  +      G +     +   +          +V   ++++ Y+K G    A
Sbjct: 210 --DSFSWTILIDGLSKSGKLEAARDVFDRMPIRN------SVSWNAMINGYMKAGDSNTA 261

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           + +FD + ++S+++W+S+I GY + +   +A++LF  +    +  +   +   +   +  
Sbjct: 262 KELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGM 321

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             +  G+ +H+Y  K     D  +   +++MY KCG +  A  +F  +P K +  WT +I
Sbjct: 322 VSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVI 381

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            G G HGL ++ + LF +M    ++P  + ++ VL+ACSH+G  E++  YF  +  D  +
Sbjct: 382 VGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGI 441

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           KP IEHY C++D L RAG L+EAK+ IE MP+K +  IW +LLS  R HG++ +G    +
Sbjct: 442 KPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQ 501

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ L  D    YV++SN++A AG W +  ++R++ + KG+KK  G S +E    IH F 
Sbjct: 502 HLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFI 561

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEKLAIG 629
            GD +HP TE+I+  L EM+K++    G +      L  ++E++ KE  L  HSE+LAI 
Sbjct: 562 VGDKSHPQTEEIYIKLCEMKKKLNVA-GHIPDTTQVLLCLEEDNEKEAELETHSERLAIA 620

Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
             L    LN + G  IR+ KNLR+C DCH   K LS I     ++RD +RFH F+ G CS
Sbjct: 621 FGL----LNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCS 676

Query: 690 CGDYW 694
           C D+W
Sbjct: 677 CKDFW 681



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 206/416 (49%), Gaps = 26/416 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C++   L  G Q+HG ++K+GF  D  + + L+ MY+KCGE+     VFD+M +++V
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQIH 136
           VSW +L+ G+ + G  +  L +F +M      P + + S  I   G+  S  +E    + 
Sbjct: 181 VSWNSLIDGYARCGEIELALEMFEEM------PEKDSFSWTILIDGLSKSGKLEAARDVF 234

Query: 137 G-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
             M +++   W     N++I+ Y K G  N A  +FD MP +SL+TWN+MI GY      
Sbjct: 235 DRMPIRNSVSW-----NAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQF 289

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            K L LF  M      P+  T    + A   + S+G G  +H +++ SGF      V+  
Sbjct: 290 TKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGF--KTDGVLGT 347

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
            L++ Y KCG +  A RVF  I +K +  W+S+I+G      + + +ELF ++    L+ 
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407

Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVP--SGLDTSVSN--SIVDMYLKCGLIDEA 371
                  ++   +     E     H Y   +    G+  S+ +   ++D+  + G ++EA
Sbjct: 408 HAITFIGVLNACSHAGFAEDA---HRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEA 464

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +    MP+K N V WT +++G  KHG  +  +G +    L D+ PD      +LS
Sbjct: 465 KDTIERMPIKANKVIWTSLLSGSRKHGNIR--MGEYAAQHLIDLAPDTTGCYVILS 518



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 37/240 (15%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYL--KCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +  Q+HA + K  S    SVS+ ++ +Y   +   +  A  LF+ +    +V+W ++I  
Sbjct: 30  EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC 89

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE------------- 439
           Y ++  + +A+ LF K+L D V PD      VL  C+  G ++E ++             
Sbjct: 90  YIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVD 148

Query: 440 ---------YFSR-----LCN---DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
                     +S+     LC    D+     +  ++ ++D   R G ++ A  + E MP 
Sbjct: 149 KFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPE 208

Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           K S + W  L+      G LE  R+V +   R+   N V++  M N +  AG  N  + L
Sbjct: 209 KDSFS-WTILIDGLSKSGKLEAARDVFD---RMPIRNSVSWNAMINGYMKAGDSNTAKEL 264


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/601 (36%), Positives = 331/601 (55%), Gaps = 38/601 (6%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDM---YSKCGRINEAARMFDVMPAKSLITWN 183
           S  E   QIH   +K+G   +       +      +    +  A  +FD         WN
Sbjct: 25  SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            MI G+  +   ++ LLL+++M       + +TF S LKAC +L +    TQIH  +   
Sbjct: 85  LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144

Query: 244 GFP---YSVKTVIA--------------------------GSLVDFYVKCGCLVEARRVF 274
           G+    Y+V ++I                            S++  YVK G +  A  +F
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
             + +K+ ISW+++I GY Q +   EA++LF +++   ++ D   L++ +   A    +E
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           QGK IH+Y  K    +D+ +   ++DMY KCG ++EA E+F  +  K+V  WT +I+GY 
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
            HG  +EA+  F +M    ++P+ + + AVL+ACS++GLVEE +  F  +  D  +KP I
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY CIVD LGRAG LDEAK  I+ MP+KP+  IW  LL ACR+H ++ELG E+GEIL+ 
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           +D  +   YV  +NIHA    W++    R+L + +G+ KV G S + ++   H F  GD 
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL-RVHSEKLAIGLALV 633
           +HP  EKI      M +++ EE G+V  ++  L D+ ++ + E++   HSEKLAI   L+
Sbjct: 505 SHPEIEKIQSKWRIMRRKL-EENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLI 563

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
           +     +PG +IR+ KNLRVC DCH+  K +SKI K   V+RD TRFH F  G CSCGDY
Sbjct: 564 KT----KPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDY 619

Query: 694 W 694
           W
Sbjct: 620 W 620



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 193/425 (45%), Gaps = 43/425 (10%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE-- 62
           SFSL          L+ CSK   L    Q+H  ++K G   D       +          
Sbjct: 7   SFSLEHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSD 63

Query: 63  -MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  VFD     +   W  ++ GF  +   +  L L+ +M  SS   N +T  + +K
Sbjct: 64  FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           A   LS+ E   QIH    K G+E +    NS+I+ Y+  G    A  +FD +P    ++
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEI------------------------------ 211
           WN++I GYV AG  D  L LFRKM E   I                              
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243

Query: 212 -PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  +  + L AC  LG++  G  IH +L  +     + +V+   L+D Y KCG + EA
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEA 301

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             VF  I++KSV +W++LI GYA   +  EA+  F ++++  ++ +    ++++   +  
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
            LVE+GK I  Y+ +    L  ++ +   IVD+  + GL+DEA     EMP+K N V W 
Sbjct: 362 GLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420

Query: 388 VIITG 392
            ++  
Sbjct: 421 ALLKA 425



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 41/334 (12%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA-------------------- 58
           L+ CS     +   Q+H  + K+G+  D+   N LI+ YA                    
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181

Query: 59  -----------KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
                      K G+M+ A  +F KM E+N +SWT ++ G++Q    K  L LF +M +S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
            V+P+  +L+  + A   L ++E G  IH    K+    + V+G  +IDMY+KCG + EA
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
             +F  +  KS+  W A+I+GY   G+  + +  F +MQ+ G  P+  TFT+ L AC   
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARR-VFDLIEQKSVIS 284
           G V  G  I     +    Y++K  I   G +VD   + G L EA+R + ++  + + + 
Sbjct: 362 GLVEEGKLI---FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           W +L+      +N+    EL  ++ E  + +D +
Sbjct: 419 WGALLKACRIHKNI----ELGEEIGEILIAIDPY 448



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 1   MNRVSFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNN 51
           MN+ +  L  E Q          LA++L  C++   L+ G  +H  L K     D +L  
Sbjct: 227 MNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286

Query: 52  DLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
            LIDMYAKCGEM  A  VF  + +++V +WTAL+ G+  +G+ +  +S F +M    +KP
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAAR 169
           N  T +  + A      VE G  I    M+  +   P + +   I+D+  + G ++EA R
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKR 405

Query: 170 MFDVMPAK-SLITWNAMIAG 188
               MP K + + W A++  
Sbjct: 406 FIQEMPLKPNAVIWGALLKA 425


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 330/582 (56%), Gaps = 4/582 (0%)

Query: 31  GVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G   H  ++K +   F   L N L++MYAK   +N A  + +    R+VV+WTAL+ G +
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG   + L  F  M S  V+PN+FT    +KAS  L     G Q+H + +K G   +  
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG S+ DMYSK G +N+A ++FD MP ++L TWNA I+  VL G  +  ++ F ++   G
Sbjct: 145 VGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD  TF + L AC     +G G Q+HGF+I SG+  +V   ++  L+DFY KCG +  
Sbjct: 205 GKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS--VSNGLIDFYGKCGEVEC 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           +  VFD + +++ +SWSSLI  Y Q     +A  LF + R+  ++   F++SS++   A 
Sbjct: 263 SEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAG 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            + +E G+ + A A K     +  V++++VDMY KCG ID A + FN MP +N+V+W  +
Sbjct: 323 LSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNAL 382

Query: 390 ITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           + GY   G A +AV L  +M     + P  V+ +  LSACS +G ++   + F  +    
Sbjct: 383 LGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERY 442

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P  EHY+C+VD LGRAG ++ A + I+ MP  P+I+IW  LL ACR+HG  ELG+  
Sbjct: 443 GVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLA 502

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L  LD  +  N+V++SN+ A  G W E   +R   +  G+KK AG SW+ VD  IH 
Sbjct: 503 AEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHM 562

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           F   D +H    +I  +L ++ K M++  G +    YAL ++
Sbjct: 563 FQAKDKSHEKDPEIQDILGKLRKEMQDAAGCIADPNYALFEV 604



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS  L L  G QLHG +++ G+  ++ ++N LID Y KCGE+  +  VFD+M ERN 
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW++L+  ++QN   +    LF +     ++P +F +S+ + A   LS +E G  +  +
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  E N  V ++++DMY KCG I+ A + F+ MP ++L++WNA++ GY   G+++K 
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395

Query: 199 LLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + L  +M    G +P   +    L AC   G +  G +I
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/699 (32%), Positives = 365/699 (52%), Gaps = 32/699 (4%)

Query: 2    NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSF-DLMLNNDLIDMYAKC 60
            N+VSF  +         L  CS +  LD+G ++H  ++     + +  +   L+ MY KC
Sbjct: 436  NKVSFIAI---------LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKC 486

Query: 61   GEMNGACAVFDKML--ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
            G +  A  VF +M    R++V+W  ++  + QN  +K       +M    V P+  + ++
Sbjct: 487  GSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTS 546

Query: 119  NIKASGVLSSV--ENGMQIHGMC-MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                  VLSS       Q+  MC ++SG+  +  +  ++I M+ +C  + +A  +FD M 
Sbjct: 547  ------VLSSCYCSQEAQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDEMD 599

Query: 176  AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
               +++W AM++         +   LFR+MQ  G IPD+FT  +TL  C    ++G G  
Sbjct: 600  HGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKI 659

Query: 236  IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
            IH  +   G    +   +  +L++ Y  CG   EA   F+ ++ + ++SW+ +   YAQ 
Sbjct: 660  IHACVTEIGLEADI--AVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQA 717

Query: 296  ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
                EA+ LFR ++   ++ D    S+ + V    ALV  GK  H  AA+     D SV+
Sbjct: 718  GLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVA 777

Query: 356  NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
              +V +Y KCG +DEA  LF       VV    II    +HG ++EAV +F KM  + V 
Sbjct: 778  TGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVR 837

Query: 416  PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
            PD    ++++SAC H+G+VEE    F  +     + P +EHY+C VD LGRAG+L+ A+ 
Sbjct: 838  PDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQ 897

Query: 476  LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            +I  MP + +  +W +LL  C++ GD ELG    + +L LD  N   +V++SNI+   G 
Sbjct: 898  IIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGK 957

Query: 536  WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
            W + +  RK    + +K   G SW+E+ K++H F  GD +HP T++I+ VL ++E  M+ 
Sbjct: 958  WKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRR 1017

Query: 596  ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
                 Y     L D ++E KE++L  HSE++AI   L+       P   +++ KNLRVCG
Sbjct: 1018 A---GYEADKGL-DAEDELKEKALGYHSERIAIAFGLI----ATPPDTTLKIVKNLRVCG 1069

Query: 656  DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH   K +S I+    +VRD+ RFH F  G CSC D W
Sbjct: 1070 DCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 241/502 (48%), Gaps = 25/502 (4%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           ++ Q     L+ C  +  L  G + H  +   G    L L N LI+MY +CG +  A A+
Sbjct: 23  ADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSS 128
           F KM ERNVVSWTAL+    Q+G      +LF  M   SS  PN +TL   + A      
Sbjct: 83  FSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142

Query: 129 VENGMQIHGMCMKSGFEWN----PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           +  G  IH M  + G E       +VGN++I+MY+KCG   +A  +F  +P K +++W A
Sbjct: 143 LAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTA 202

Query: 185 MIAGYVLAG--YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           M   Y      Y D  L +FR+M      P+  TF + L AC SL     GT +H  L  
Sbjct: 203 MAGAYAQERRFYPD-ALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHE 258

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS---VISWSSLILGYAQEENLA 299
           +G  +    +   +L++ Y KCG    A  VF  +  +    ++SW+++I    +     
Sbjct: 259 AGLGFD--PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHG 316

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFA----DFALVEQGKQIHAYAAKVPSGLDTSVS 355
           +AM +FR+LR   ++ +   L +++   A    DF      ++ H    +     D  V 
Sbjct: 317 DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG---AARKFHGRIWESGYLRDVVVG 373

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           N+I+ MY KCG    A  +F  +  K +V++W  ++          + V  F  MLL  +
Sbjct: 374 NAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P+ V+++A+L+ACS+S  ++  ++  S +   +R        + +V   G+ G + EA+
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAE 493

Query: 475 NLIESMPVKP-SIAIWQTLLSA 495
            + + MP+   S+  W  +L A
Sbjct: 494 LVFKEMPLPSRSLVTWNVMLGA 515


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/661 (34%), Positives = 349/661 (52%), Gaps = 15/661 (2%)

Query: 40  KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLS 99
           K GF    ++   LI MY +CG ++ A   FD++ ER VVSW AL+  + +    +  L 
Sbjct: 138 KSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLR 197

Query: 100 LFCQMGSSSVKPNEFTLSTNIKA-SGVLSSVEN-GMQIHGMCMKSGFEWNPVVGNSIIDM 157
           +F +M    + PN  T+     A +G+ + +   G  IH   + SG      V NSII++
Sbjct: 198 VFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINL 257

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           + + G I+ A  +F+ +  + + +WN MIA +   G+  + L L+ +M      PD  TF
Sbjct: 258 FGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIR---PDGVTF 314

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            + L+AC     +  G  IH      G  Y    ++A +LV  Y +CG L  A  VF  I
Sbjct: 315 VNVLEACDCPDDLERGESIHRDARAHG--YDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG- 336
           +   VI+ +++I  +AQ      ++  FRQ+ +  ++   F L +++G  A         
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 337 KQIHAYAAKVPSGLDTS---VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           + +H + A+ P   D     V N++V+MY KCG +D A  +F+  P  NV TW  I+ GY
Sbjct: 433 RDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGY 492

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
            +HG A  AV L  +M L  + PD +++ A LSA SH+  VE+    F  +  D  + P 
Sbjct: 493 AQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPS 552

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILL 513
           +EHY  +VD LGRAG L+EA+  + SM +    A W  LL ACR+H D +      E ++
Sbjct: 553 VEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIV 612

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGD 573
            +D  +  +Y ++SN+++ AG W+E E +R+     G +K  GRSW+EV   +H F   D
Sbjct: 613 AIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKD 672

Query: 574 DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALV 633
            +HP T +I++ L E+   +K E  +V  V   LHD+++E +E  L  HSEKLA+G  L+
Sbjct: 673 RSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLI 732

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
                 + G  I + KNLR+C DCH  +K  SK  K   VVRD  RFH F GG CSC D 
Sbjct: 733 ----GTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDC 788

Query: 694 W 694
           W
Sbjct: 789 W 789



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 254/514 (49%), Gaps = 15/514 (2%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D  R   ++  LD G ++H  +++ G+   L L+N L+ MYA+      A  + D+M  R
Sbjct: 17  DLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRR 76

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N VSW A++    Q G+    L  F +M      P+     + IKA G   +++ G  + 
Sbjct: 77  NAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPG---TIQEGEIVQ 133

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
               KSGF+ + VVG ++I MY +CGR++ A   FD +  + +++WNA+I  Y      +
Sbjct: 134 DFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKE 193

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQIHGFLITSGFPYSVKTVIA 254
           + L +FR+M   G  P+  T      A   + +     G  IH   I SG   SV TV A
Sbjct: 194 QSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGL-ISVTTV-A 251

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            S+++ + + G +  A  +F+ ++Q+ V SW+++I  +A+  ++ EA++L+ ++   +++
Sbjct: 252 NSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIR 308

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            DG    +++        +E+G+ IH  A       D  V+ ++V MY +CG +D A E+
Sbjct: 309 PDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEV 368

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +    V+T   II  + + G A  ++  FR+ML   + P     +AVL AC+ SG  
Sbjct: 369 FAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAA 428

Query: 435 EESQEYFSRL---CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
             +     R    C        I   + +V+   + G LD A+ + ++ P + +++ W  
Sbjct: 429 ASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAP-QGNVSTWNA 487

Query: 492 LLSACRVHGDLELG-REVGEILLRLDGDNPVNYV 524
           +++    HG  ++  R + E+ L     +P+++ 
Sbjct: 488 IMAGYAQHGYADMAVRLLYEMQLAGISPDPISFT 521


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/660 (33%), Positives = 352/660 (53%), Gaps = 55/660 (8%)

Query: 36  GALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAK 95
            AL  + F   ++    L+  Y + G +  A  +F +M ERN VS+T L+ G L  G   
Sbjct: 101 AALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVN 160

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
               LF +M    V      LS   +A  +    E       M  ++   W      ++I
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRI---TEARALFDEMPKRNVVSWT-----AMI 212

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
             Y++ G +N A ++F+VMP ++ ++W AM+ GY+ AG+ +    LF  M EH       
Sbjct: 213 SGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH------- 265

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
                + AC ++  VG G +                             G +  A+ VF+
Sbjct: 266 ----PVAACNAM-MVGFGQR-----------------------------GMVDAAKTVFE 291

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            + ++   +WS++I  Y Q E L EA+  FR++  R ++ +   + S++ V A  A+++ 
Sbjct: 292 KMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDY 351

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+++HA   +    +D    ++++ MY+KCG +D+A  +F+    K++V W  +ITGY +
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQ 411

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HGL ++A+G+F  M L  + PDG+ Y+  L+ACS++G V+E +E F+ +  +  ++P  E
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAE 471

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HYSC+VD LGR+G ++EA +LI++MPV+P   IW  L+ ACR+H + E+     + LL L
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLEL 531

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD- 574
           +  N   YV++S+I+   G W +  ++RK   S+ L K  G SW+E DK +H F  GD  
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVL 591

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
            HP    I ++L +++  + E  G+     + LHDI EE K  SLR HSE+ A+   L  
Sbjct: 592 AHPEHAAILRILEKLDGLLMES-GYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGL-- 648

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             L    G  IRV KNLRVCGDCH  IK ++KI     ++RDA RFH F+ G CSC DYW
Sbjct: 649 --LKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 191/437 (43%), Gaps = 83/437 (18%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-- 209
           N+ I   ++ G I  A   F+ MP ++  ++NA++AGY      D  L LFR+M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 210 --------------EIPDEFTFTSTL---KACGSLGSVGGGTQIHGFL-----ITSGFP- 246
                          +PD     +++    +  S  S+  G   HG L     +    P 
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 247 --YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +   TV+ G L+D     G + EARR+FD +  + V++W++++ GY Q   + EA  L
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++ +R++       ++M+  +A    V   +++      +P   + S +  +V  Y++
Sbjct: 197 FDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEV---MPERNEVSWTAMLVG-YIQ 248

Query: 365 CGLIDEATELFNEMPVKNVV-------------------------------TWTVIITGY 393
            G +++A ELFN MP   V                                TW+ +I  Y
Sbjct: 249 AGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY 308

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL--CNDKRMK 451
            ++    EA+  FR+ML   V P+  + +++L+ C+   +++  +E  + +  C+     
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCS---FD 365

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             +   S ++    + G LD+AK +  +   K  I +W ++++    HG   LG +   I
Sbjct: 366 MDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG---LGEQALGI 421

Query: 512 L--LRLDGDNP--VNYV 524
              +RL G +P  + Y+
Sbjct: 422 FHDMRLAGMSPDGITYI 438



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 2/170 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   +LDYG ++H A+++  F  D+   + LI MY KCG ++ A  VF     +++
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V W +++ G+ Q+G  +  L +F  M  + + P+  T    + A      V+ G +I + 
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMI 186
           M + S         + ++D+  + G + EA  +   MP +   + W A++
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/660 (33%), Positives = 352/660 (53%), Gaps = 55/660 (8%)

Query: 36  GALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAK 95
            AL  + F   ++    L+  Y + G +  A  +F +M ERN VS+T L+ G L  G   
Sbjct: 101 AALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVN 160

Query: 96  ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
               LF +M    V      LS   +A  +    E       M  ++   W      ++I
Sbjct: 161 EARRLFDEMPDRDVVAWTAMLSGYCQAGRI---TEARALFDEMPKRNVVSWT-----AMI 212

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
             Y++ G +N A ++F+VMP ++ ++W AM+ GY+ AG+ +    LF  M EH       
Sbjct: 213 SGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH------- 265

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
                + AC ++  VG G +                             G +  A+ VF+
Sbjct: 266 ----PVAACNAM-MVGFGQR-----------------------------GMVDAAKTVFE 291

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            + ++   +WS++I  Y Q E L EA+  FR++  R ++ +   + S++ V A  A+++ 
Sbjct: 292 KMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDY 351

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G+++HA   +    +D    ++++ MY+KCG +D+A  +F+    K++V W  +ITGY +
Sbjct: 352 GREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQ 411

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HGL ++A+G+F  M L  + PDG+ Y+  L+ACS++G V+E +E F+ +  +  ++P  E
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAE 471

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HYSC+VD LGR+G ++EA +LI++MPV+P   IW  L+ ACR+H + E+     + LL L
Sbjct: 472 HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLEL 531

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD- 574
           +  N   YV++S+I+   G W +  ++RK   S+ L K  G SW+E DK +H F  GD  
Sbjct: 532 EPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVL 591

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
            HP    I ++L +++  + E  G+     + LHDI EE K  SLR HSE+ A+   L  
Sbjct: 592 AHPEHAAILRILEKLDGLLMES-GYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGL-- 648

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             L    G  IRV KNLRVCGDCH  IK ++KI     ++RDA RFH F+ G CSC DYW
Sbjct: 649 --LKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 191/437 (43%), Gaps = 83/437 (18%)

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-- 209
           N+ I   ++ G I  A   F+ MP ++  ++NA++AGY      D  L LFR+M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 210 --------------EIPDEFTFTSTL---KACGSLGSVGGGTQIHGFL-----ITSGFP- 246
                          +PD     +++    +  S  S+  G   HG L     +    P 
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 247 --YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +   TV+ G L+D     G + EARR+FD +  + V++W++++ GY Q   + EA  L
Sbjct: 141 RNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++ +R++       ++M+  +A    V   +++      +P   + S +  +V  Y++
Sbjct: 197 FDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEV---MPERNEVSWTAMLVG-YIQ 248

Query: 365 CGLIDEATELFNEMPVKNVV-------------------------------TWTVIITGY 393
            G +++A ELFN MP   V                                TW+ +I  Y
Sbjct: 249 AGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAY 308

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL--CNDKRMK 451
            ++    EA+  FR+ML   V P+  + +++L+ C+   +++  +E  + +  C+     
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCS---FD 365

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             +   S ++    + G LD+AK +  +   K  I +W ++++    HG   LG +   I
Sbjct: 366 MDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG---LGEQALGI 421

Query: 512 L--LRLDGDNP--VNYV 524
              +RL G +P  + Y+
Sbjct: 422 FHDMRLAGMSPDGITYI 438



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+   +LDYG ++H A+++  F  D+   + LI MY KCG ++ A  VF     +++
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDI 399

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V W +++ G+ Q+G  +  L +F  M  + + P+  T    + A      V+ G +I + 
Sbjct: 400 VMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
           M + S         + ++D+  + G + EA  +   MP +   + W A++  
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/670 (32%), Positives = 372/670 (55%), Gaps = 9/670 (1%)

Query: 26  LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM 85
           L++  G  LHG  +K G +  +++NN L+ MY K      A  VFD+M  R+ VS+  ++
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
           CG+L+    +  + +F +      KP+  T+S+ ++A G L  +     I+   +K+GF 
Sbjct: 281 CGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
               V N +ID+Y+KCG +  A  +F+ M  K  ++WN++I+GY+ +G   + + LF+ M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
               E  D  T+   +     L  +  G  +H   I SG    +   ++ +L+D Y KCG
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI--CIDLSVSNALIDMYAKCG 457

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            + ++ ++F  +     ++W+++I    +  + A  +++  Q+R+  +  D       + 
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
           + A  A    GK+IH    +     +  + N++++MY KCG ++ ++ +F  M  ++VVT
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           WT +I  YG +G  ++A+  F  M    + PD V ++A++ ACSHSGLV+E    F ++ 
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
              ++ P IEHY+C+VD L R+ ++ +A+  I++MP+KP  +IW ++L ACR  GD+E  
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             V   ++ L+ D+P   ++ SN +A    W++   +RK  + K + K  G SW+EV K 
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV-HSE 624
           +H F  GDD+ P +E I++ L  +   M +E G++   +    +++EE ++  L   HSE
Sbjct: 758 VHVFSSGDDSAPQSEAIYKSLEILYSLMAKE-GYIPDPREVSQNLEEEEEKRRLICGHSE 816

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           +LAI   L    LN +PG  ++V KNLRVCGDCHE  K +SKI+    +VRDA RFH F+
Sbjct: 817 RLAIAFGL----LNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFK 872

Query: 685 GGVCSCGDYW 694
            G CSC D W
Sbjct: 873 DGTCSCKDRW 882



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 229/411 (55%), Gaps = 3/411 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+     + G  ++  ++ MGF  DL + N L+DMY++ G +  A  VFD+M  R++
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G+  +G  +  L ++ ++ +S + P+ FT+S+ + A G L  V+ G  +HG 
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KSG     VV N ++ MY K  R  +A R+FD M  +  +++N MI GY+     ++ 
Sbjct: 233 ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES 292

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + +F +  +  + PD  T +S L+ACG L  +     I+ +++ +GF   +++ +   L+
Sbjct: 293 VRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF--VLESTVRNILI 349

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG ++ AR VF+ +E K  +SW+S+I GY Q  +L EAM+LF+ +     Q D  
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
               ++ V    A ++ GK +H+   K    +D SVSN+++DMY KCG + ++ ++F+ M
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
              + VTW  +I+   + G     + +  +M   +V PD   +L  L  C+
Sbjct: 470 GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 256/482 (53%), Gaps = 16/482 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALMCGFLQN 91
           ++H  ++ +G       +  LID Y+   E   + +VF ++   +NV  W +++  F +N
Sbjct: 25  RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
           G     L  + ++  S V P+++T  + IKA   L   E G  ++   +  GFE +  VG
Sbjct: 85  GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+++DMYS+ G +  A ++FD MP + L++WN++I+GY   GY ++ L ++ +++    +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD FT +S L A G+L  V  G  +HGF + SG   +   V+   LV  Y+K     +AR
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG--VNSVVVVNNGLVAMYLKFRRPTDAR 262

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
           RVFD ++ +  +S++++I GY + E + E++ +F +  ++  + D   +SS++       
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLR 321

Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
            +   K I+ Y  K    L+++V N ++D+Y KCG +  A ++FN M  K+ V+W  II+
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE-----ESQEYFSRLCN 446
           GY + G   EA+ LF+ M++ + + D + YL ++S  +    ++      S    S +C 
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
           D  +       + ++D   + G + ++  +  SM    ++  W T++SAC   GD   G 
Sbjct: 442 DLSVS------NALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGL 494

Query: 507 EV 508
           +V
Sbjct: 495 QV 496



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 211/418 (50%), Gaps = 9/418 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C     L     ++  ++K GF  +  + N LID+YAKCG+M  A  VF+ M  ++ 
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +++ G++Q+G+    + LF  M     + +  T    I  S  L+ ++ G  +H  
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KSG   +  V N++IDMY+KCG + ++ ++F  M     +TWN +I+  V  G    G
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +  +M++   +PD  TF  TL  C SL +   G +IH  L+   F Y  +  I  +L+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR--FGYESELQIGNALI 551

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           + Y KCGCL  + RVF+ + ++ V++W+ +I  Y       +A+E F  + +  +  D  
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
           V  +++   +   LV++G        K    +D  + +   +VD+  +   I +A E   
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFE-KMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
            MP+K +   W  ++      G  + A  + R+++  ++ PD   Y ++L++ +++ L
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRII--ELNPDDPGY-SILASNAYAAL 725


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 236/735 (32%), Positives = 367/735 (49%), Gaps = 78/735 (10%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCG------EMNGACAVFDKMLERNVVSWTAL 84
             +LH  LV  G        + L++    C        +  A  +FD+M     +  TAL
Sbjct: 15  AAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTAL 74

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV-LSSVENGMQIHGMCMKSG 143
              F  +   ++ L L+ +M  + V  + FT     K      + V     +H  C ++ 
Sbjct: 75  RACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTM 134

Query: 144 FEWN-PVVGNSIIDMYSKCGRINEAARMFDVMP--------------------------- 175
                P+V N II MY + G   +A R FD +P                           
Sbjct: 135 LPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLL 194

Query: 176 ----AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
               A+++I+W  +I+GY  AG + + +  F  M   G  PDE T    L AC  L  + 
Sbjct: 195 RHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLV 254

Query: 232 GGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG----------------------CLVE 269
            G  +H  +   G   S K V+A  L+D Y KCG                       +++
Sbjct: 255 FGRSLHKLVGEKGMLMSGKLVVA--LIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMID 312

Query: 270 ----------ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
                     AR +FD +E + +++++SLI GY     L EA+ LF Q+R   L+ D F 
Sbjct: 313 GYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFT 372

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
           + S++   A    + QG+ +HA   +    +D  +  +++DMYLKCG ++EA+ +F  M 
Sbjct: 373 MVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMS 432

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           V++V TW+ +I G   +G+ K A+  F  M +D  +P+ V Y+A+L+ACSHS L++E + 
Sbjct: 433 VRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRL 492

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
           YF  +     ++P IEHY C++D LGR+G LDEA +L+ +MP++P+  IW ++LSACRVH
Sbjct: 493 YFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVH 552

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            D  L R   E LL+L+ D    YV + NI+ D+  W +  ++R+L   +G+KK AG S 
Sbjct: 553 KDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSS 612

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           + V  ++H F   D THP   +I  ++ E+ +R+K  +G+         D+ EE KE +L
Sbjct: 613 ITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLK-SVGYSPITSQITVDVDEEEKEHAL 671

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEK+AI   L+    +  P   + + KNLRVC DCH  IK +S+I     +VRD +R
Sbjct: 672 LAHSEKIAIAFGLI----SLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSR 727

Query: 680 FHRFEGGVCSCGDYW 694
           FH F  G CSC D+W
Sbjct: 728 FHHFRDGTCSCNDFW 742



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 60/317 (18%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE---------------- 62
           L  C++   L +G  LH  + + G      L   LIDMYAKCG+                
Sbjct: 244 LSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRR 303

Query: 63  -------MNGACA---------VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
                  ++G C          +FD+M +R++V++ +L+ G++  G  +  L LF QM  
Sbjct: 304 PQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRR 363

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
             ++ + FT+ + + A   L ++  G  +H    +   E +  +G +++DMY KCGR+ E
Sbjct: 364 HDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEE 423

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A+ +F  M  + + TW+AMIAG    G     L  F  M+  G  P+  T+ + L AC  
Sbjct: 424 ASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACS- 482

Query: 227 LGSVGGGTQIHGFLITSGFPY--------SVKTVIA--GSLVDFYVKCGCLVEARRVFDL 276
                     H  L+  G  Y        +++ +I   G ++D   + G L EA    DL
Sbjct: 483 ----------HSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEA---MDL 529

Query: 277 IE----QKSVISWSSLI 289
           +     Q + + W+S++
Sbjct: 530 VRTMPMQPNAVIWASIL 546



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 41/241 (17%)

Query: 229 SVGGGTQIHGFLITSG---FPYSVKTVIAGSLVDFYVKCGCL--VEARRVFDLIEQKSVI 283
           SV    ++H  L+ SG    P S   ++  SLV+ +     L    A  +FD +   + +
Sbjct: 11  SVRQAAELHAVLVASGRLLHPPSASHLL-NSLVNCFTPTDPLHLRYALCLFDRMPCSTFL 69

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD-FALVEQGKQIHA- 341
             ++L   +         + L+R++R   +  D F    +    A   A V   + +HA 
Sbjct: 70  FDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAA 129

Query: 342 -YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI----------- 389
            +   +PS +   VSN I+ MY++ GL  +A   F+++PVK+ V WT +           
Sbjct: 130 CFRTMLPSAVPL-VSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLD 188

Query: 390 --------------------ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
                               I+GY + G A EAV  F  ML D +EPD V  + +LSAC+
Sbjct: 189 DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACA 248

Query: 430 H 430
            
Sbjct: 249 Q 249



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G  LH  + +     D+ L   L+DMY KCG +  A  VF  M  R+V
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDV 436

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +W+A++ G   NG  KA L  F  M     +PN  T    + A      ++ G +++  
Sbjct: 437 HTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEG-RLYFE 495

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL-AGYS 195
            M+      P++ +   +ID+  + G ++EA  +   MP +     NA+I   +L A   
Sbjct: 496 EMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQP----NAVIWASILSACRV 551

Query: 196 DKGLLLFRKMQEH 208
            K   L R   EH
Sbjct: 552 HKDANLARNAAEH 564


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/558 (34%), Positives = 328/558 (58%), Gaps = 3/558 (0%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           YG ++H  L+K G  +D+ + + L++MYAKC +   A  +FD+  +R+V  W A++  + 
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           ++G A+  L  F +M     +PN  T +  + +   L ++E G ++H   ++     +  
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V ++++DMY KCG +  A  +F+ +P K+ ITWNAMI GY L G S   + L  +M + G
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P   T TS + A      +  G  IHG+++ +     V   I  SL+DFY KCG +  
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRI--DVDIFIDVSLIDFYFKCGYVSS 361

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           A  +F  I +  V+SW+ +I G+    N  +A+ ++  ++E  ++ D    SS +   + 
Sbjct: 362 AETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQ 421

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            A +++G+++H          +  V  +++DMY KCG +DEA +LF+++P +++V+WT +
Sbjct: 422 LAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSM 481

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I  YG HG A EA+ LF +M   +V  D V +LAVLSACSH+GLV+E   YF+ +     
Sbjct: 482 IFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYD 541

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIE-SMPVKPSIAIWQTLLSACRVHGDLELGREV 508
           +KP IEHYSC++D LGRAGRL EA  +++ S   +  I +  TL SAC +H +  LG ++
Sbjct: 542 IKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQI 601

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
           G++L+ +D D+P  Y+++SN++A    W+E  ++R+  +  GLKK  G SW+E+++ IH 
Sbjct: 602 GKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHP 661

Query: 569 FYGGDDTHPLTEKIHQVL 586
           F+  D ++PL + +++ L
Sbjct: 662 FFAEDKSNPLADGVYECL 679



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 259/509 (50%), Gaps = 10/509 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM- 73
           L  +LR C+ + LL  G  +H  +   GF  +++L+  LI  Y  C +   A  VF    
Sbjct: 6   LLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTND 65

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENG 132
              +V  W AL+  +  N      L LF Q+  +S V+P+ +T    +KA G L  V  G
Sbjct: 66  CPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYG 125

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            +IH   +K+G  W+  VG+S+++MY+KC +  +A ++FD  P + +  WNA+I+ Y   
Sbjct: 126 RRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKD 185

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
           G ++  L  F KM+E G  P+  TFT  + +C  L ++  G ++H  LI       +   
Sbjct: 186 GKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRIL--LDAF 243

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LVD Y KCGCL  A+ VF+ I +K+ I+W+++I GY+ + +    +EL  ++ +  
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            +     L+S++   +    +  GK IH Y  +    +D  +  S++D Y KCG +  A 
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F  +    VV+W V+I+G+   G   +A+ ++  M    V+PD + + + LSACS   
Sbjct: 364 TIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLA 423

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            +++ +E    + N K     I     ++D   + G +DEA+ L   +P K  +  W ++
Sbjct: 424 ALDKGRELHYCIINHKLEANEIV-MGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSM 481

Query: 493 LSACRVHGD----LELGREVGEILLRLDG 517
           + A   HG     L L  E+ ++ +R D 
Sbjct: 482 IFAYGSHGQASEALRLFDEMQKLNVRADS 510



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 187/335 (55%), Gaps = 11/335 (3%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V+F++V         +  C++ L L+ G ++H  L++     D  + + L+DMY KCG
Sbjct: 206 NSVTFTVV---------VSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCG 256

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  VF+K+  +N ++W A++ G+   G++++C+ L  +M     KP   TL++ I 
Sbjct: 257 CLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIY 316

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           AS     + +G  IHG  +++  + +  +  S+ID Y KCG ++ A  +F  +    +++
Sbjct: 317 ASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVS 376

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN MI+G+V+ G   + L ++  M+EH   PD  TF+STL AC  L ++  G ++H  +I
Sbjct: 377 WNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCII 436

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
                     ++ G+L+D Y KCG + EAR++F  + ++ ++SW+S+I  Y      +EA
Sbjct: 437 NHKL--EANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEA 494

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           + LF ++++ +++ D     +++   +   LV++G
Sbjct: 495 LRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEG 529



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 11/327 (3%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L+ C S   +  G  IH  + + GF  ++  V++ SL+ FY  C     A  
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNI--VLSKSLIGFYFSCHDYASAEL 59

Query: 273 VFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADF 330
           VF   +    +S W++L+  Y       EA++LF QL   S ++ D +    ++      
Sbjct: 60  VFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGL 119

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
             V  G++IH +  K     D  V +S+++MY KC    +A +LF+E P ++V  W  +I
Sbjct: 120 GRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVI 179

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           + Y K G A+ A+  F KM     EP+ V +  V+S+C+    +E  +E    L  ++R+
Sbjct: 180 SCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELI-ERRI 238

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
                  S +VD  G+ G L+ AK + E +P K +I  W  +++   + GD    R   E
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAIT-WNAMITGYSLKGD---SRSCIE 294

Query: 511 ILLRLD--GDNPVNYVMMSNIHADAGS 535
           +L+R++  G  P    + S I+A + S
Sbjct: 295 LLMRMNDEGTKPTLMTLTSIIYASSRS 321


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 329/582 (56%), Gaps = 4/582 (0%)

Query: 31  GVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G   H  ++K +   F   L N L++MYAK   +N A  + +    R+VV+WTAL+ G +
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QNG   + L  F  M S  V+PN+FT    +KAS  L     G Q+H + +K G   +  
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG S+ DMYSK G +N+A ++FD MP ++L TWNA I+  VL G  +  ++ F ++   G
Sbjct: 145 VGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVG 204

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             PD  TF   L AC     +G G Q+HGF+I SG+  +V   ++  L+DFY KCG +  
Sbjct: 205 GKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS--VSNGLIDFYGKCGEVEC 262

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           +  VFD + +++ +SWSSLI  Y Q     +A  LF + R+  ++   F++SS++   A 
Sbjct: 263 SEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAG 322

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            + +E G+ + A A K     +  V++++VDMY KCG ID A + FN MP +N+V+W  +
Sbjct: 323 LSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNAL 382

Query: 390 ITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           + GY   G A +AV L  +M     + P  V+ +  LSACS +G ++   + F  +    
Sbjct: 383 LGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERY 442

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P  EHY+C+VD LGRAG ++ A + I+ MP  P+I+IW  LL ACR+HG  ELG+  
Sbjct: 443 GVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLA 502

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L  LD  +  N+V++SN+ A  G W E   +R   +  G+KK AG SW+ VD  IH 
Sbjct: 503 AEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHM 562

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           F   D +H    +I  +L ++ K M++  G +    YAL ++
Sbjct: 563 FQAKDKSHEKDPEIQDILGKLRKEMQDAAGCIADPNYALFEV 604



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 1/219 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS  L L  G QLHG +++ G+  ++ ++N LID Y KCGE+  +  VFD+M ERN 
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW++L+  ++QN   +    LF +     ++P +F +S+ + A   LS +E G  +  +
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+  E N  V ++++DMY KCG I+ A + F+ MP ++L++WNA++ GY   G+++K 
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395

Query: 199 LLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           + L  +M    G +P   +    L AC   G +  G +I
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/564 (35%), Positives = 330/564 (58%), Gaps = 2/564 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H   +K     D+ + + L++ Y K G +  A  +FD+M ERN+VSWT ++ G+    
Sbjct: 133 QVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQ 192

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            AK  L +F  M       NEF  ++ + A      V++G Q+H + +K+G      V N
Sbjct: 193 MAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLN 252

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           +++ MY+KCG +N +  +F++   K+ ITW+A+I GY  AG S K L LF KM   G +P
Sbjct: 253 ALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVP 312

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
            EFT    LKAC  + ++  G Q HG+L+ SG+   + T  A +LVD Y K G   +AR+
Sbjct: 313 SEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYT--ATALVDMYAKFGFTGDARK 370

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
            FD + +  ++ W+S+I GY Q     EA+ ++ +++ R +  +   ++S++   ++ A 
Sbjct: 371 GFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAA 430

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           +EQGKQIHA   K   G + S+ +++  MY KCG ++E   +F  M  +++V+W  +I+G
Sbjct: 431 LEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISG 490

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
             ++G  +EA+ LF +M L+  +PD + ++ VLSACSH G+V+    YF+ + ++  + P
Sbjct: 491 LSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVP 550

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
           R+EHY+C+VD L RAG+L+EAK  IES  +   + +W+ LL ACR H + ELG   GE L
Sbjct: 551 RVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKL 610

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           + L       YV++S+I+   G   +  R+R++ + +G++K  G SW+E+   +H F  G
Sbjct: 611 MELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVG 670

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEE 596
           D  HP  E+I   +  + K MK++
Sbjct: 671 DQIHPQIEEIQGAIWRLRKHMKDD 694



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 268/512 (52%), Gaps = 25/512 (4%)

Query: 25  NLLLDYGVQ--------LHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           NLL+ Y  Q        LH  ++K+ + S    L N+LI  YAKCG ++GA  VF+ +  
Sbjct: 12  NLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKH 71

Query: 76  RNVVSWTALMCGFLQNGN--AKACLSLFCQMGSSSVKPNEFTLSTNIKASGV-LSSVENG 132
           +NVVS+  L+ G   NG+  +   L LF +M ++++ P+  T      A+ + L    + 
Sbjct: 72  KNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDA 131

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            Q+H + +K+    +  VG+S+++ Y K G + EA ++FD MP ++L++W  MI+GY   
Sbjct: 132 RQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASK 191

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             + + L +F  M+      +EF FTS L A      V  G Q+H  ++ +G    V   
Sbjct: 192 QMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVS-- 249

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +LV  Y KCG L  +  +F++   K+ I+WS+LI GY+Q  +  +A++LF ++    
Sbjct: 250 VLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAG 309

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDE 370
                F L  ++   +D A +E+GKQ H Y  K  SG +T +  + ++VDMY K G   +
Sbjct: 310 FVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLK--SGYETQIYTATALVDMYAKFGFTGD 367

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A + F+ +   ++V WT II GY ++G  +EA+ ++ +M +  + P+ +   +VL ACS+
Sbjct: 368 ARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSN 427

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              +E+ ++  +R      + P +   S +     + G L+E   +   M ++  I  W 
Sbjct: 428 LAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQRDIVSWN 485

Query: 491 TLLSACRVHGDLELGREVGEIL--LRLDGDNP 520
            ++S    +G    GRE  E+   +RL+G  P
Sbjct: 486 AMISGLSQNGH---GREALELFEEMRLEGTKP 514



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 175/310 (56%), Gaps = 2/310 (0%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
            +D G Q+H  +VK G    + + N L+ MYAKCG +N +  +F+   ++N ++W+AL+ 
Sbjct: 228 FVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALIT 287

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+ Q G++   L LF +M  +   P+EFTL   +KA   ++++E G Q HG  +KSG+E 
Sbjct: 288 GYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYET 347

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
                 +++DMY+K G   +A + FD +    L+ W ++IAGYV  G +++ L ++ +MQ
Sbjct: 348 QIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQ 407

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
               +P+E T  S LKAC +L ++  G QIH   I  G    +   I  +L   Y KCG 
Sbjct: 408 MRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELS--IRSALSTMYAKCGS 465

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L E   +F  + Q+ ++SW+++I G +Q  +  EA+ELF ++R    + D     +++  
Sbjct: 466 LEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSA 525

Query: 327 FADFALVEQG 336
            +   +V++G
Sbjct: 526 CSHMGIVKRG 535



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 1/261 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L+ CS    ++ G Q HG L+K G+   +     L+DMYAK G    A   FD +L
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E ++V WT+++ G++QNG  +  LS++ +M    + PNE T+++ +KA   L+++E G Q
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQ 436

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   +K G      + +++  MY+KCG + E   +F  M  + +++WNAMI+G    G+
Sbjct: 437 IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGH 496

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + L LF +M+  G  PD  TF + L AC  +G V  G      +    F    +    
Sbjct: 497 GREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDE-FCLVPRVEHY 555

Query: 255 GSLVDFYVKCGCLVEARRVFD 275
             +VD   + G L EA+   +
Sbjct: 556 ACMVDVLSRAGKLNEAKEFIE 576



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 14/297 (4%)

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY-SVKTVIAGSLVDFYVKCGCLVEA 270
           P   +F + L       S+  G  +H  +I    PY S    +A +L+ FY KCG L  A
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIK--IPYLSSCNYLANNLIKFYAKCGHLHGA 62

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAE--AMELFRQLRERSLQVDGFVLSSMMGVFA 328
           + VF+ ++ K+V+S++ LI G +   +      +ELFR++   ++  D        GVF 
Sbjct: 63  KLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFP---GVFT 119

Query: 329 DFALVE----QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
             AL        +Q+H    K  S  D  V +S+V+ Y K G + EA +LF+ MP +N+V
Sbjct: 120 AAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLV 179

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
           +WT +I+GY    +AKEA+G+F  M L +   +   + +VLSA      V+  ++    +
Sbjct: 180 SWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVV 239

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             +  ++  +   + +V    + G L+ +  L E    K +I  W  L++     GD
Sbjct: 240 VKNGVLE-FVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAIT-WSALITGYSQAGD 294


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/723 (32%), Positives = 373/723 (51%), Gaps = 47/723 (6%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNG 65
           L    Q L+   +C S   L     ++H  +++ G  FD    + L    A      ++ 
Sbjct: 22  LFRNHQILSTIDKCSSSKQL----KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDY 77

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASG 124
           A  +FD++ + N+ +W  L+  +  + +      +F  +       PN+FT    IKA+ 
Sbjct: 78  ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L +   G  +HGM +K  F  +  + NS++  Y  CG ++ A R+F  +  K +++WN+
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI+ +      +  L LF KM+    +P+  T    L AC     +  G  +  ++   G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ---------- 294
               V   +  +++D Y KCG + +A+++FD + ++ V SW+ ++ GYA+          
Sbjct: 258 I--KVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLV 315

Query: 295 -------------------EEN--LAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFAL 332
                              E+N    EA+ +F +L+  +  + D   L S +   A    
Sbjct: 316 FNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGA 375

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++ G  IH Y  +    L+  + +S+VDMY KCG +++A E+F  +  ++V  W+ +I G
Sbjct: 376 IDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAG 435

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
            G HG  K A+ LF +M    V+P+ V +  VL ACSH+GLV+E + +F  +     + P
Sbjct: 436 LGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVP 495

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            ++HY+C+VD LGRAG L+EA  LI  M   PS ++W  LL AC +H ++ELG    + L
Sbjct: 496 EMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQL 555

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L+L+  N    V++SNI+A  G W +   LRKL R   LKK  G S +E +  +H F  G
Sbjct: 556 LKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVG 615

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLA 631
           D+THPL+  I+  L E+  ++K  +G+     + L  I+E+  KE++L +HSEKLAI   
Sbjct: 616 DNTHPLSSNIYSKLEEIATKLK-SVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFG 674

Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
           LV       P + IRV KNLR+CGDCH F K +S++     ++RD  RFH F  G CSC 
Sbjct: 675 LVTLA----PSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCM 730

Query: 692 DYW 694
           DYW
Sbjct: 731 DYW 733


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/616 (33%), Positives = 338/616 (54%), Gaps = 12/616 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q H   VK   S D+   + L++MY K G +  A  +FD+M ERN VSW  ++ G+  
Sbjct: 135 GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYAS 194

Query: 91  NGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
              A     LF  M         NEF  ++ + A      V  G Q+H + MK+G     
Sbjct: 195 QELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIV 254

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
            V N+++ MY KCG + +A + F++   K+ ITW+AM+ G+   G SDK L LF  M + 
Sbjct: 255 SVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           GE+P EFT    + AC    ++  G Q+HG+ +  G  Y ++  +  +LVD Y KCG +V
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLG--YELQLYVLSALVDMYAKCGSIV 372

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           +AR+ F+ I+Q  V+ W+S+I GY Q  +   A+ L+ +++   +  +   ++S++   +
Sbjct: 373 DARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACS 432

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + A ++QGKQ+HA   K    L+  + +++  MY KCG +D+   +F  MP ++V++W  
Sbjct: 433 NLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNA 492

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I+G  ++G   E + LF KM L+  +PD V ++ +LSACSH GLV+    YF  + ++ 
Sbjct: 493 MISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEF 552

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + P +EHY+C+VD L RAG+L EAK  IES  V   + +W+ LL+A + H D +LG   
Sbjct: 553 NIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYA 612

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
           GE L+ L       YV++S+I+   G W + ER+R + +++G+ K  G SW+E+    H 
Sbjct: 613 GEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHV 672

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  GD+ HP  ++I   L  + K MK+E     G +  L  +  E+  + L+   +   I
Sbjct: 673 FVVGDNMHPQIDEIRLGLKLLTKLMKDE-----GYQPLLDSLPPETISDDLKDQEDSHEI 727

Query: 629 GLALVRG---GLNEQP 641
            L  + G    +N  P
Sbjct: 728 QLRFIYGENTDMNHNP 743



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 265/517 (51%), Gaps = 12/517 (2%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+++  L  G  LH  ++  G      + N LI++YAKC   + A  VFD +  ++VVSW
Sbjct: 20  CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79

Query: 82  TALMCGFLQ---NGNAKACLSLFCQ--MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
             L+  F Q   +  +   + LF Q  M   ++ PN  TL+    A+  LS    G Q H
Sbjct: 80  NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
            + +K+    +    +S+++MY K G + EA  +FD MP ++ ++W  MI+GY     +D
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199

Query: 197 KGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           +   LF+ M  +E G+  +EF FTS L A      V  G Q+H   + +G    V   +A
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS--VA 257

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +LV  YVKCG L +A + F+L   K+ I+WS+++ G+AQ  +  +A++LF  + +    
Sbjct: 258 NALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL 317

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
              F L  ++   +D   + +G+Q+H Y+ K+   L   V +++VDMY KCG I +A + 
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKG 377

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  +   +VV WT IITGY ++G  + A+ L+ KM L  V P+ +   +VL ACS+   +
Sbjct: 378 FECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAAL 437

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ ++  + +         I   S +     + G LD+   +   MP +  I+ W  ++S
Sbjct: 438 DQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVIS-WNAMIS 495

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
               +G    G E+ E +  L+G  P N   ++ + A
Sbjct: 496 GLSQNGRGNEGLELFEKMC-LEGTKPDNVTFVNLLSA 531



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 192/376 (51%), Gaps = 10/376 (2%)

Query: 26  LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM 85
           +L++ G Q+H   +K G    + + N L+ MY KCG +  A   F+    +N ++W+A++
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV 292

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            GF Q G++   L LF  M  S   P+EFTL   I A     ++  G Q+HG  +K G+E
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYE 352

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
               V ++++DMY+KCG I +A + F+ +    ++ W ++I GYV  G  +  L L+ KM
Sbjct: 353 LQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM 412

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           Q  G IP++ T  S LKAC +L ++  G Q+H  +I   + +S++  I  +L   Y KCG
Sbjct: 413 QLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK--YNFSLEIPIGSALSAMYAKCG 470

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +  R+F  +  + VISW+++I G +Q     E +ELF ++     + D     +++ 
Sbjct: 471 SLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLS 530

Query: 326 VFADFALVEQG----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
             +   LV++G    K +       P+         +VD+  + G + EA E      V 
Sbjct: 531 ACSHMGLVDRGWVYFKMMFDEFNIAPT---VEHYACMVDILSRAGKLHEAKEFIESATVD 587

Query: 382 N-VVTWTVIITGYGKH 396
           + +  W +++     H
Sbjct: 588 HGLCLWRILLAASKNH 603



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 150/264 (56%), Gaps = 4/264 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  CS    +  G Q+HG  +K+G+   L + + L+DMYAKCG +  A   F+ + + +V
Sbjct: 327 INACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDV 386

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V WT+++ G++QNG+ +  L+L+ +M    V PN+ T+++ +KA   L++++ G Q+H  
Sbjct: 387 VLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAG 446

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K  F     +G+++  MY+KCG +++  R+F  MPA+ +I+WNAMI+G    G  ++G
Sbjct: 447 IIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEG 506

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF KM   G  PD  TF + L AC  +G V  G  ++  ++   F  +        +V
Sbjct: 507 LELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG-WVYFKMMFDEFNIAPTVEHYACMV 565

Query: 259 DFYVKCGCLVEARRVFDLIEQKSV 282
           D   + G L EA+   + IE  +V
Sbjct: 566 DILSRAGKLHEAK---EFIESATV 586


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/565 (37%), Positives = 317/565 (56%), Gaps = 42/565 (7%)

Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
           G +  A  +F+ +P  +  T N++I GY       + +L ++ M   G  PD FTF S  
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
           K+CG L     G Q+H      GF  +    I  +L++ Y  CGCLV AR+VFD +  KS
Sbjct: 86  KSCGVLCE---GKQLHCHSTKLGF--ASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 140

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLR---------------------ERSLQV----- 315
           V+SW+++I  YAQ +   EA++LFR++                      E +L +     
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200

Query: 316 ------DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
                 D   ++S++        +E GK +H Y  K    +D ++  ++VDMY KCG I+
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            A  +F EMP K+V+TWT +I G    G   +A+ LF +M + +V+PD + ++ VL+ACS
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+GLV E   YF+ + N   ++P IEHY C+VD LGRAGR+ EA++LI++MP+ P   + 
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 380

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             LLSACR+HG+L +     + L+ LD  N   YV++SNI++   +W   +++R+L   +
Sbjct: 381 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 440

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            +KK  G S +EV   +H F  GD +HP + +I++ L +M +R+K   G+V      L D
Sbjct: 441 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSA-GYVPDKSEVLFD 499

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           + E+ KE  L +HSEKLAI   L    L+  PG  IRV KNLRVC DCH  +K +S++  
Sbjct: 500 MDEKEKENELSLHSEKLAIAFGL----LSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYN 555

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              +VRD  RFH F  G CSC D+W
Sbjct: 556 REIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 135/283 (47%), Gaps = 40/283 (14%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTA------- 83
           G QLH    K+GF+ D  + N L++MY+ CG +  A  VFDKM+ ++VVSW         
Sbjct: 94  GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 153

Query: 84  -------------------LMC------GFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
                              L C      G +++ + +  LSLF +M  S VK ++ T+++
Sbjct: 154 WDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 213

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            + A   L ++E G  +H    K   E +  +G +++DMY+KCG I  A R+F  MP K 
Sbjct: 214 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 273

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++TW A+I G  + G   K L LF +MQ     PD  TF   L AC   G V  G     
Sbjct: 274 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI---A 330

Query: 239 FLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQ 279
           +  +    Y ++  I   G +VD   + G + EA    DLI+ 
Sbjct: 331 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE---DLIQN 370



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 44/356 (12%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VF+++      +  +++ G+      +  +  +  M    + P+ FT  +  
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           K+ GVL     G Q+H    K GF  +  + N++++MYS CG +  A ++FD M  KS++
Sbjct: 86  KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 181 TW--------------------------------NAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +W                                N MI G+V     ++ L LF +MQ  
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G   D+ T  S L AC  LG++  G  +H ++        V   +  +LVD Y KCG + 
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI--EVDVALGTALVDMYAKCGSIE 260

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            A RVF  + +K V++W++LI+G A      +A+ELF +++   ++ D      ++   +
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320

Query: 329 DFALVEQGKQIHAYAAKVPS--GLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV 380
              LV +G    AY   +P+  G+  S+ +   +VDM  + G I EA +L   MP+
Sbjct: 321 HAGLVNEGI---AYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 373



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 40/280 (14%)

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
           P+S   ++A   +      G L  AR VF+ I   +  + +S+I GY  +    +A+  +
Sbjct: 10  PFSASKIVAFCALH---DSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFY 66

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           + +  + L  D F   S+   F    ++ +GKQ+H ++ K+    D  + N++++MY  C
Sbjct: 67  QLMMLQGLDPDRFTFPSL---FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNC 123

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK----------------- 408
           G +  A ++F++M  K+VV+W  +I  Y +  L  EA+ LFR+                 
Sbjct: 124 GCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGH 183

Query: 409 ---------------MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
                          M L  V+ D V   ++L AC+H G +E  + +       ++++  
Sbjct: 184 VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK-WLHVYIEKEKIEVD 242

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           +   + +VD   + G ++ A  + + MP K  +  W  L+
Sbjct: 243 VALGTALVDMYAKCGSIESAMRVFQEMPEK-DVMTWTALI 281



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           ++  +A  L  C+    L+ G  LH  + K     D+ L   L+DMYAKCG +  A  VF
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 266

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
            +M E++V++WTAL+ G    G     L LF +M  S VKP+  T    + A      V 
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326

Query: 131 NGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
            G+   + M  K G + +      ++DM  + GRI EA  +   MP
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/648 (35%), Positives = 362/648 (55%), Gaps = 31/648 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +I  Y K G +  A  VFD M ERNVVSWT+++ G++Q G  +    LF +M      
Sbjct: 87  NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM------ 140

Query: 111 PNEFTLSTNIKASGVL--SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P    +S  +   G+L  S +++  ++  M      E + VV  ++I  Y + GR++EA 
Sbjct: 141 PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEAR 196

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD M  +++ TW  M++GY   G  D    LF  M E  E+    ++T+ L     +G
Sbjct: 197 ELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV----SWTAML-----MG 247

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
               G     F +    P  VK ++A   ++  +   G +  AR +F+ ++++   +W++
Sbjct: 248 YTQSGRMKEAFELFEAMP--VKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNA 305

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I  + ++    EA+ LF +++   + ++   + S++ V A  A ++ G+Q+HA   +  
Sbjct: 306 MIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSE 365

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
              D  V++ ++ MY+KCG +  A  +FN    K+VV W  +ITGY +HGL +EA+ +F 
Sbjct: 366 FDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFH 425

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
            M    V+PD V ++ VLSACS+SG V+E  E F  +    +++P IEHY+C+VD LGRA
Sbjct: 426 DMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRA 485

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
           GR+DEA  L+E MP++P   +W  LL ACR H  L+L     E L +L+  N   YV++S
Sbjct: 486 GRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLS 545

Query: 528 NIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVL 586
           +++A  G W + E LRK    + + K  G SW+EV+K++H F GGD  +HP    I Q+L
Sbjct: 546 HMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQML 604

Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
            ++   ++E  G+     + LHD+ EE K  SL  HSE+LA+   L    L    G  IR
Sbjct: 605 EKLSGFLREA-GYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGL----LKVPEGMPIR 659

Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           V KNLRVCGDCH  IK ++K+     ++RDA RFH F+ G CSC D+W
Sbjct: 660 VMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 179/395 (45%), Gaps = 38/395 (9%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D+++  ++I  Y + G ++ A  +FD+M  RNV +WT ++ G+ +NG       LF    
Sbjct: 175 DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLF---- 230

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE--------WNPVVGNSIIDM 157
              V P    +S      G   S           MK  FE        W  V  N +I  
Sbjct: 231 --EVMPERNEVSWTAMLMGYTQSGR---------MKEAFELFEAMPVKW-IVACNEMILQ 278

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           +   G ++ A  MF+ M  +   TWNAMI  +   G   + L LF +MQ  G   +  + 
Sbjct: 279 FGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSM 338

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            S L  C SL S+  G Q+H  L+ S F   +   +A  L+  YVKCG LV A+ +F+  
Sbjct: 339 ISVLSVCASLASLDHGRQVHARLVRSEFDQDL--YVASVLITMYVKCGDLVRAKGIFNRF 396

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K V+ W+S+I GY+Q     EA+ +F  +    +Q D      ++   +    V++G 
Sbjct: 397 LFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGF 456

Query: 338 QIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYG 394
           +I   A K    ++  + +   +VD+  + G +DEA EL  +MP++ + + W  ++    
Sbjct: 457 EIFE-AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACR 515

Query: 395 KH---GLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            H    LA+ AV    K+     EP       +LS
Sbjct: 516 NHMKLDLAEVAVEKLAKL-----EPKNAGPYVLLS 545



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 76/362 (20%)

Query: 152 NSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            S I  Y + G I+ A ++FD   +P +++ +WNAM++ Y  +      LLLF +M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                                                    TV    ++  YVK G + +
Sbjct: 83  -----------------------------------------TVSFNGMISGYVKNGMVAD 101

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+VFD++ +++V+SW+S++ GY QE  + EA +LF ++  R++       + M+G    
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV----VSWTVMIGGLLK 157

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            + ++  K++      +P   D  V  +++  Y + G +DEA ELF+EM V+NV TWT +
Sbjct: 158 ESRIDDAKKLFDM---IPEK-DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTM 213

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
           ++GY K+G    A  LF  M     E + V++ A+L   + SG ++E+ E F  +     
Sbjct: 214 VSGYAKNGRVDVARKLFEVM----PERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI 269

Query: 445 --CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-D 501
             CN+            ++   G AG +  A+ + E M  +     W  ++      G D
Sbjct: 270 VACNE------------MILQFGLAGEMHRARMMFEGMKERDE-GTWNAMIKVFERKGLD 316

Query: 502 LE 503
           LE
Sbjct: 317 LE 318



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 198/460 (43%), Gaps = 64/460 (13%)

Query: 50  NNDLIDMYAKCGEMNGACAVFDK--MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
           N   I  Y + G+++ A  VFD   + +R + SW A++  + ++   +  L LF QM   
Sbjct: 22  NTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM--- 78

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
              P   T+S N   SG                                 Y K G + +A
Sbjct: 79  ---PQRNTVSFNGMISG---------------------------------YVKNGMVADA 102

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            ++FDVMP +++++W +M+ GYV  G  ++   LF +M     +    ++T  +      
Sbjct: 103 RKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV----SWTVMIGGLLKE 158

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
             +    ++   +           V+  +++  Y + G L EAR +FD ++ ++V +W++
Sbjct: 159 SRIDDAKKLFDMIPEK------DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTT 212

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           ++ GYA+   +  A +LF  + ER+ +V    +  +MG      + E  +   A   K  
Sbjct: 213 MVSGYAKNGRVDVARKLFEVMPERN-EVSWTAM--LMGYTQSGRMKEAFELFEAMPVKW- 268

Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
                   N ++  +   G +  A  +F  M  ++  TW  +I  + + GL  EA+GLF 
Sbjct: 269 ----IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFA 324

Query: 408 KMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRA 467
           +M  + V  +  + ++VLS C+    ++  ++  +RL   +     +   S ++    + 
Sbjct: 325 RMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSE-FDQDLYVASVLITMYVKC 383

Query: 468 GRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
           G L  AK +      K  + +W ++++    HG   LG E
Sbjct: 384 GDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHG---LGEE 419



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 4/173 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    LD+G Q+H  LV+  F  DL + + LI MY KCG++  A  +F++ L ++V
Sbjct: 342 LSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDV 401

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W +++ G+ Q+G  +  L++F  M SS V+P+E T    + A      V+ G +I   
Sbjct: 402 VMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE- 460

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
            MK  ++  P + +   ++D+  + GR++EA  + + MP +   I W A++  
Sbjct: 461 AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGA 513


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/611 (35%), Positives = 347/611 (56%), Gaps = 19/611 (3%)

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH---GMCMKSGFEW- 146
           +G   A L+L   + ++ V+ +  +L   IK      +V +G  IH    +C   G    
Sbjct: 44  DGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGAT 103

Query: 147 --NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA-GYSDKGLLLFR 203
             +  V NS++ MY+K G +++A  +F  MP +++++W  ++A    A G   + L    
Sbjct: 104 HGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLV 163

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           +M+  G   + +TF+S L ACG+ G +     +H  +I  G    V   +  SL+D Y+K
Sbjct: 164 EMRRDGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDV--FVRSSLIDAYMK 218

Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
            G L   R VFD +    ++ W+S+I G+AQ  +   AMELF +++E     +   L+S+
Sbjct: 219 LGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSV 278

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
           +       ++E G+Q+HA+  K     D  + N+++DMY KCG + +A  LF+ M  ++V
Sbjct: 279 LRACTGMVMLEVGRQVHAHVLKYDR--DLILHNALLDMYCKCGCLLDADALFSRMHDRDV 336

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
           ++W+ +I+G  ++G + EA+ +F  M  +   P+ +  + VL ACSH+GLVE+   YF  
Sbjct: 337 ISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRS 396

Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
           +     ++P  EH +C+VD LGRAG+LDEA   I  M  +P   IW+TLL ACR+H +  
Sbjct: 397 MDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNAT 456

Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
           L       +L+L+ ++    +++SNI+AD   W+  E+  K  R +G+KK  GRSW+E+ 
Sbjct: 457 LASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELG 516

Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
           K +H F  G+ +HP +++I Q L  + +R K +LG+V   ++ L D+  E KE+ L+ HS
Sbjct: 517 KLVHVFIAGELSHPCSDRIVQELNRLIRRAK-DLGYVPQTEFVLQDLGTEQKEDLLKYHS 575

Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
           EKLAI      G +N   GK +R+ KNLR+CGDCH F K +SK      ++RD  RFH F
Sbjct: 576 EKLAIAF----GTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHF 631

Query: 684 EGGVCSCGDYW 694
           + GVCSCGDYW
Sbjct: 632 QHGVCSCGDYW 642



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ-NGNAKACLSLFCQMG 105
           L ++N L+ MYAK G ++ A  +F  M +RNVVSWT ++       G  K  L    +M 
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              V  N +T S+ + A G    +     +H   +K G + +  V +S+ID Y K G ++
Sbjct: 167 RDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
               +FD M    L+ WN++IAG+  +G     + LF +M+E G + ++ T TS L+AC 
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            +  +  G Q+H  ++     Y    ++  +L+D Y KCGCL++A  +F  +  + VISW
Sbjct: 284 GMVMLEVGRQVHAHVLK----YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISW 339

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I G AQ     EA+++F  ++      +   +  ++   +   LVE G        K
Sbjct: 340 STMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDK 399

Query: 346 VPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
           +  G+       N +VD+  + G +DEA +   EM  + + V W  ++     H
Sbjct: 400 L-FGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMH 452



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 112/200 (56%), Gaps = 2/200 (1%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++K+G   D+ + + LID Y K G+++    VFD+M+  ++V W +++ GF Q+G+
Sbjct: 193 MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGD 252

Query: 94  AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
               + LF +M  S    N+ TL++ ++A   +  +E G Q+H   +K  ++ + ++ N+
Sbjct: 253 GVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNA 310

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           ++DMY KCG + +A  +F  M  + +I+W+ MI+G    G S + L +F  M+  G  P+
Sbjct: 311 LLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPN 370

Query: 214 EFTFTSTLKACGSLGSVGGG 233
             T    L AC   G V  G
Sbjct: 371 NITMVGVLFACSHAGLVEDG 390



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 21/350 (6%)

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL----ITSGFP 246
           L G     L L   +   G   D  +    +K C   G+VG G  IH  +       G  
Sbjct: 43  LDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGA 102

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL-AEAMELF 305
                 ++ SLV  Y K G L +A  +F  + Q++V+SW++++   A       EA+   
Sbjct: 103 THGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFL 162

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            ++R   +  + +  SS++G      ++     +HA   KV    D  V +S++D Y+K 
Sbjct: 163 VEMRRDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKL 219

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +D    +F+EM   ++V W  II G+ + G    A+ LF +M       +     +VL
Sbjct: 220 GDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVL 279

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            AC+   ++E  ++  + +    R    +  ++ ++D   + G L +A  L   M  +  
Sbjct: 280 RACTGMVMLEVGRQVHAHVLKYDR---DLILHNALLDMYCKCGCLLDADALFSRMHDRDV 336

Query: 486 IAIWQTLLSACRVHGDLELGREVGEI----LLRLDGDNPVNYVMMSNIHA 531
           I+ W T++S     G  + GR V  +    L++ +G  P N  M+  + A
Sbjct: 337 IS-WSTMIS-----GLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFA 380



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 3/168 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
            ++ +  L   LR C+  ++L+ G Q+H  ++K  +  DL+L+N L+DMY KCG +  A 
Sbjct: 268 FLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDAD 325

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           A+F +M +R+V+SW+ ++ G  QNG +   L +F  M +    PN  T+   + A     
Sbjct: 326 ALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAG 385

Query: 128 SVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
            VE+G      M    G +      N ++D+  + G+++EA +    M
Sbjct: 386 LVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEM 433


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/537 (37%), Positives = 317/537 (59%), Gaps = 4/537 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   VK+G    +   N L+D Y KCG +     VF++ +E+N VSW +++ G    G
Sbjct: 133 RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 192

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L+ F  M  +  +PN  T+S+ +     L   + G +IHG  M+ G E +  + N
Sbjct: 193 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 252

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+IDMY+K G   EA+ +F  +  +++++WNAMIA Y L     + +    +MQE GE P
Sbjct: 253 SLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECP 312

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  TFT+ L AC  LG +G G +IH   +  G   +    ++ SL+D Y KCGCL  AR 
Sbjct: 313 NAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL--TSDLFVSNSLIDMYAKCGCLHSARN 370

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+   +K  +S++ LI+GY++ ++  +++ LF ++R    + D      ++   A+ A 
Sbjct: 371 VFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAA 429

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++QGK++H  A +        VSNS++D Y KCG ID A  LFN++  K+V +W  +I G
Sbjct: 430 LKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILG 489

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG  G  + A+ +F  M  D V+ D V+Y+AVLSACSH GLVE   +YFS +   +R++P
Sbjct: 490 YGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLA-QRLEP 548

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
              HY+C+VD LGRAG ++EA  LI+ +P+ P   IW  LL ACR++G++ELGR   E L
Sbjct: 549 TEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHL 608

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             L   +   Y+++SNI+A+ G W+E  ++R+L +S+G KK  G SWV++  ++H F
Sbjct: 609 FELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAF 665



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 261/512 (50%), Gaps = 10/512 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  +  G+++HG + K+GF  D+ + N L+ +Y  CG +N A  +FD+M ER+V
Sbjct: 17  LKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDV 76

Query: 79  VSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW  ++     NG+  +A    F  +  S +KPN  ++ + +  S  L   E   +IH 
Sbjct: 77  VSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHC 136

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K G +      N+++D Y KCG +    ++F+    K+ ++WN++I G    G    
Sbjct: 137 YSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWD 196

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L  FR M + G  P+  T +S L     L     G +IHGF +  G    +   IA SL
Sbjct: 197 ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDI--FIANSL 254

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y K G   EA  +F  +++++++SW+++I  YA      EA+    Q++E     + 
Sbjct: 255 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 314

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
              ++++   A    +  GK+IHA   ++    D  VSNS++DMY KCG +  A  +FN 
Sbjct: 315 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN- 373

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              K+ V++ ++I GY +     +++ LF +M L   +PD V+++ V+SAC++   +++ 
Sbjct: 374 TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 433

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +E       +  +   +   + ++D   + GR+D A  L   +  K  +A W T++    
Sbjct: 434 KEVHGVALRN-HLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFK-DVASWNTMILGYG 491

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           + G+LE    + E +     D+ V Y ++S I
Sbjct: 492 MIGELETAISMFEAM----RDDTVQYDLVSYI 519



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 216/453 (47%), Gaps = 45/453 (9%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++HG  ++MG   D+ + N LIDMYAK G    A  +F  +  RN+VSW A++  +  
Sbjct: 232 GKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYAL 291

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N      +    QM  +   PN  T +  + A   L  +  G +IH M ++ G   +  V
Sbjct: 292 NRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFV 351

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            NS+IDMY+KCG ++ A  +F+    K  +++N +I GY       + L LF +M+  G+
Sbjct: 352 SNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 410

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  +F   + AC +L ++  G ++HG  + +   YS    ++ SL+DFY KCG +  A
Sbjct: 411 KPDVVSFVGVISACANLAALKQGKEVHGVALRNHL-YS-HLFVSNSLLDFYTKCGRIDIA 468

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F+ I  K V SW+++ILGY     L  A+ +F  +R+ ++Q D     +++   +  
Sbjct: 469 CRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHG 528

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            LVE+G Q   ++  +   L+ +  +   +VD+  + G ++EA +L  ++P+        
Sbjct: 529 GLVERGWQY--FSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIA------- 579

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
                                      PD   + A+L AC   G VE  +     L    
Sbjct: 580 ---------------------------PDANIWGALLGACRIYGNVELGRRAAEHLF--- 609

Query: 449 RMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESM 480
            +KP+   +Y  + +     GR DEA  + E M
Sbjct: 610 ELKPQHCGYYILLSNIYAETGRWDEANKIRELM 642



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 17/297 (5%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M   G   D+ TF   LK C     +  G ++HG +   GF   V   +  +L+  Y  C
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDV--YVGNTLLMLYGNC 58

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV-LSSM 323
           G L +ARR+FD + ++ V+SW+++I   +   +  EA   +  +  RS+     V + S+
Sbjct: 59  GFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISL 118

Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK 381
           + + A     E  ++IH Y+ KV  GLD+ V+  N++VD Y KCG +    ++FNE   K
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKV--GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEK 176

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY- 440
           N V+W  II G    G   +A+  FR M+    +P+ V   ++L         +  +E  
Sbjct: 177 NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 236

Query: 441 -FSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
            FS      RM    + +  + ++D   ++G   EA  +  ++  + +I  W  +++
Sbjct: 237 GFS-----MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLD-RRNIVSWNAMIA 287



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+    L  G ++HG  ++      L ++N L+D Y KCG ++ AC +F+++L ++V
Sbjct: 421 ISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDV 480

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++ G+   G  +  +S+F  M   +V+ +  +    + A      VE G Q    
Sbjct: 481 ASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSE 540

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDK 197
            +    E   +    ++D+  + G + EAA++   +P A     W A++    + G  + 
Sbjct: 541 MLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVEL 600

Query: 198 GLLLFRKMQEH 208
           G    R+  EH
Sbjct: 601 G----RRAAEH 607



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 31/203 (15%)

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R +Q+D      ++ + +D   + +G ++H    K+    D  V N+++ +Y  CG +++
Sbjct: 4   RGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLND 63

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV-EPDGVAYLAVLSACS 429
           A  LF+EMP ++VV+W  II     +G   EA   +  M+L  V +P+ V+ +++L    
Sbjct: 64  ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP--- 120

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYS-------------CIVDSLGRAGRLDEAKNL 476
                       S    D+ M  RI  YS              +VD+ G+ G +     +
Sbjct: 121 -----------ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQV 169

Query: 477 IESMPVKPSIAIWQTLLS--ACR 497
                 K  ++ W ++++  AC+
Sbjct: 170 FNETVEKNEVS-WNSIINGLACK 191


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/561 (36%), Positives = 331/561 (59%), Gaps = 5/561 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    +  G ++HG++VK+GF  D+ + N L+  Y  CG +  A  VFD+M E+++
Sbjct: 48  LKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDL 107

Query: 79  VSWTALMCGFLQNG-NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW  ++  F  NG + +  L +F  M    +KPN  T+S+ +     L   + G ++HG
Sbjct: 108 VSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHG 167

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             ++ G E +  + NS+IDMY+K G   EA+ +F  + AK++++WNAMIA +    +   
Sbjct: 168 SSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELV 227

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + L R+MQ++GE+P+  TFT+ L AC  +G V  G +IH   I  G  + +   ++ +L
Sbjct: 228 AVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL--FVSNAL 285

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
            D Y K G L  AR VFD    +  +S++ LI+G++Q  + +E++ LF +++   L+ D 
Sbjct: 286 TDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDN 344

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
                 +   A+   ++QGK+IH +  +    +   V+NS++D Y KCG I  A  +F+ 
Sbjct: 345 VSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           M  K+V +W  +I GYG  G    A+ LF  M  DDVE D V+++AVLSACSH GL+E+ 
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           ++YF  L   + ++P   HY+C+VD LGRAG ++EA  LI+ +P+ P   IW  LL ACR
Sbjct: 465 RKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
           ++G+LEL     E L  L  ++   Y ++SN++A+ G W+E  R+R+L +S+G+KK  G 
Sbjct: 524 IYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGC 583

Query: 558 SWVEVDKEIHFFYGGDDTHPL 578
           SWV++ ++ H F  G+    L
Sbjct: 584 SWVQIGEQAHAFVVGEKIEGL 604



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 226/437 (51%), Gaps = 7/437 (1%)

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
           W  L+ G+   G     L ++ QM    V+P++ T    +KA      V  G ++HG  +
Sbjct: 10  WNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           K GFE +  VGN+++  Y  CG + +A R+FD MP K L++WN MI  + + G+  +  L
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 201 -LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            +FR M + G  P+  T +S L     L     G ++HG  I  G    +   IA SL+D
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDI--FIANSLID 186

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y K G   EA  VF  ++ K+V+SW+++I  +AQ      A+ L RQ+++     +   
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            ++++   A   LV  GK+IHA +  +    D  VSN++ DMY K G +  A  +F +  
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTS 305

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           +++ V++ ++I G+ +     E++ LF +M L  ++ D V+++  LSAC++   +++ +E
Sbjct: 306 LRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
               L   K     +   + ++D   + GR+  A+N+ + M  K  +A W T++    + 
Sbjct: 366 IHGFLLR-KLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNK-DVASWNTMILGYGML 423

Query: 500 GDLELGREVGEILLRLD 516
           G+L+   ++ E + + D
Sbjct: 424 GELDTAIDLFENMRKDD 440



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 5   SFSLVSERQRLA---------DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           S SL SE Q +           +L  C+    +  G ++HG L++  F   L + N L+D
Sbjct: 328 SLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLD 387

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
            Y KCG +  A  +FD+M  ++V SW  ++ G+   G     + LF  M    V+ +  +
Sbjct: 388 FYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVS 447

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               + A      +E G +        G E   +    ++D+  + G + EAA +   +P
Sbjct: 448 FIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLP 507

Query: 176 -AKSLITWNAMIAG 188
                  W A++  
Sbjct: 508 IVPDANIWGALLGA 521


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/573 (36%), Positives = 326/573 (56%), Gaps = 19/573 (3%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF------DVMPAKSLITWNAMIA 187
           QIH + +K G   NP+V        S    ++ A+ +          P+     +N +I 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 188 GYVLAGYSDK-GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            +    +S    L  +  M+ H   P++FTF   LKAC  +  +  G  +H  ++  GF 
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 247 YSVKTVIAGSLVDFYVKC-----GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
                 +  +LV  Y  C        V A++VFD    K  ++WS++I GYA+  N A A
Sbjct: 260 EDPH--VRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARA 317

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LFR+++   +  D   + S++   AD   +E GK + +Y  +        + N+++DM
Sbjct: 318 VTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDM 377

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           + KCG +D A ++F EM V+ +V+WT +I G   HG   EAV +F +M+   V+PD VA+
Sbjct: 378 FAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAF 437

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           + VLSACSHSGLV++   YF+ + N   + P+IEHY C+VD L RAGR++EA   + +MP
Sbjct: 438 IGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMP 497

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           V+P+  IW+++++AC   G+L+LG  V + L+R +  +  NYV++SNI+A    W +  +
Sbjct: 498 VEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTK 557

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R++   KG++K+ G + +E++ EI+ F  GD +H   ++I++++ EM + +K   G+V 
Sbjct: 558 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRA-GYVP 616

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
                L DI EE KE++L  HSEKLAI  AL    L+  PG  IR+ KNLRVC DCH   
Sbjct: 617 TTSQVLLDIDEEDKEDALYRHSEKLAIAFAL----LSTPPGTPIRIVKNLRVCEDCHSAT 672

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +SK+     VVRD  RFH F+ G+CSCGD+W
Sbjct: 673 KFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 24/386 (6%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF---DKMLE---RNVVSWTALMC 86
           Q+H  ++K+G   + ++        +    ++ A +V    D+       +   +  L+ 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 87  GFLQNGNAKA-CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            F Q  ++K   L  +  M   +V PN+FT    +KA   +  +E G  +H   +K GFE
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 146 WNPVVGNSIIDMYSKC------GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
            +P V N+++ MY  C      G ++ A ++FD  P K  +TW+AMI GY  AG S + +
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSARAV 318

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            LFR+MQ  G  PDE T  S L AC  LG++  G  +  ++       SV+  +  +L+D
Sbjct: 319 TLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVE--LCNALID 376

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            + KCG +  A +VF  ++ ++++SW+S+I+G A      EA+ +F ++ E+ +  D   
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS----NSIVDMYLKCGLIDEATELF 375
              ++   +   LV++G   H Y   + +             +VDM  + G ++EA E  
Sbjct: 437 FIGVLSACSHSGLVDKG---HYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFV 493

Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAK 400
             MPV+ N V W  I+T     G  K
Sbjct: 494 RAMPVEPNQVIWRSIVTACHARGELK 519



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 28/335 (8%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+ +F  V         L+ C+  + L+ G  +H ++VK GF  D  + N L+ MY  C 
Sbjct: 226 NKFTFPFV---------LKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCC 276

Query: 62  EMNG-----ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTL 116
           +        A  VFD+   ++ V+W+A++ G+ + GN+   ++LF +M  + V P+E T+
Sbjct: 277 QDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITM 336

Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
            + + A   L ++E G  +     +     +  + N++IDM++KCG ++ A ++F  M  
Sbjct: 337 VSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKV 396

Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +++++W +MI G  + G   + +L+F +M E G  PD+  F   L AC   G V  G   
Sbjct: 397 RTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKG--- 453

Query: 237 HGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDL--IEQKSVISWSSLILG- 291
           H +  T    +S+   I   G +VD   + G + EA        +E   VI W S++   
Sbjct: 454 HYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVI-WRSIVTAC 512

Query: 292 YAQEE-NLAE--AMELFRQLRERSLQVDGFVLSSM 323
           +A+ E  L E  A EL R  RE S + +  +LS++
Sbjct: 513 HARGELKLGESVAKELIR--REPSHESNYVLLSNI 545


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/696 (32%), Positives = 352/696 (50%), Gaps = 74/696 (10%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  +FD+M     +  TAL        +      LF +M  + V+P+ FT     K S  
Sbjct: 56  ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSS 115

Query: 126 LSSVENGM---QIHGMCMKSGFE-WNPVVGNSIIDMYSKCGRINEAARMFDVM------- 174
            S   + +    +H  C+++      P V NS+I MY + G   +A R FD +       
Sbjct: 116 SSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVA 175

Query: 175 ------------------------PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
                                   P + +I+W ++IA Y  A  + + +  F+ M  HG 
Sbjct: 176 WTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGI 235

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PDE T  + L AC  L  +  G  +H  +   G P S   V+A  L+D Y KCG    A
Sbjct: 236 APDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVA--LIDMYAKCGDFGHA 293

Query: 271 RRVFDLI--------------------------------EQKSVISWSSLILGYAQEENL 298
           ++VFD +                                E + +I+++S++ GY     L
Sbjct: 294 QQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQL 353

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
            EA+ LF  +R   L+VD F + +++   A    ++QG+ +HA   +     D  +  ++
Sbjct: 354 REALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTAL 413

Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           +DMY+KCG +DEAT +F  M  ++V TWT +I G   +G+ K A+  F +M  D  +P+ 
Sbjct: 414 LDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNS 473

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
           V+Y+AVL+ACSHS L+ E + YF  +     + P+IEHY C++D LGR+G LDEA +L++
Sbjct: 474 VSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVK 533

Query: 479 SMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNE 538
           +MP++P+  IW ++LSACRVH  ++L +   E LL+L+ D    YV + NI+ D+  W  
Sbjct: 534 TMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWEN 593

Query: 539 CERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELG 598
             ++R L   + +KK AG S + V  ++H F   D +HP   +I  +L E+  R+K  LG
Sbjct: 594 ASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK-SLG 652

Query: 599 FVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCH 658
           +         D+ EE KE++L  HSEKLAI   L+    N  P   + + KNLRVC DCH
Sbjct: 653 YSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLI----NLAPNLPVHIRKNLRVCEDCH 708

Query: 659 EFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             IK +S++     +VRD +RFH F  G CSC D+W
Sbjct: 709 SAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 38/402 (9%)

Query: 53  LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
           LI   AK G +     +  +   R+V+SWT+L+  + +   A+  +  F  M S  + P+
Sbjct: 179 LISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPD 238

Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC----------- 161
           E T+   + A   L  +E G  +H +  + G   +  +  ++IDMY+KC           
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298

Query: 162 ---------------------GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
                                G ++ A  +FD M  + +IT+N+M+ GY+ +G   + LL
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF  M+ H    D FT  + L AC SLG++  G  +H  +        +   +  +L+D 
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADI--YLGTALLDM 416

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y+KCG + EA  VF  + ++ V +W+++I G A       A+E F Q+R    Q +    
Sbjct: 417 YMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSY 476

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEM 378
            +++   +   L+ +G+ ++    ++   +   + +   ++D+  + GL+DEA +L   M
Sbjct: 477 IAVLTACSHSCLLNEGR-LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM 535

Query: 379 PVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           P++ N V W  I++    H     A      +L  + + DGV
Sbjct: 536 PIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGV 577



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 124/245 (50%), Gaps = 12/245 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +ID Y K G ++ A ++FD+M  R+++++ ++M G++ +G  +  L LF  M    ++
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            + FT+   + A   L +++ G  +H    +   E +  +G +++DMY KCGR++EA  +
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIV 429

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  M  + + TW AMIAG    G     L  F +M+  G  P+  ++ + L AC     +
Sbjct: 430 FQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLL 489

Query: 231 GGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIE----QKSVIS 284
             G     +       Y++   I   G ++D   + G L EA    DL++    Q + + 
Sbjct: 490 NEGRL---YFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA---MDLVKTMPIQPNAVI 543

Query: 285 WSSLI 289
           W+S++
Sbjct: 544 WASIL 548



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 7/177 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L  G  LH  + +     D+ L   L+DMY KCG ++ A  VF +M +R+V
Sbjct: 379 LTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDV 438

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            +WTA++ G   NG  KA L  F QM     +PN  +    + A    S + N  +++  
Sbjct: 439 HTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACS-HSCLLNEGRLYFD 497

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            M+  +  +P + +   +ID+  + G ++EA  +   MP    I  NA+I   +L+ 
Sbjct: 498 EMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP----IQPNAVIWASILSA 550


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/598 (35%), Positives = 341/598 (57%), Gaps = 19/598 (3%)

Query: 106 SSSVKPNEFTLSTNIKASGVLS---SVENGMQIHGMCMKSGFEWNPVVGNSIID---MYS 159
           SS+   NEF ++  +    +LS   S+    QI    +K+  + +  V   +I+   +  
Sbjct: 17  SSAFSKNEFVIN-QLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNP 75

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
               ++ A  +FD +  K +I +N M  GY  +        LF ++   G +PD++TF+S
Sbjct: 76  TTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSS 135

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            LKAC S  ++  G  +H F +  G  +++   I  +L++ Y +C  +  AR VFD +EQ
Sbjct: 136 LLKACASSKALREGMGLHCFAVKLGLNHNI--YICPTLINMYAECNDMNAARGVFDEMEQ 193

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI 339
             ++S++++I GYA+     EA+ LFR+L+  +++     + S++   A    ++ GK I
Sbjct: 194 PCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWI 253

Query: 340 HAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
           H Y  K   G D    V+ +++DM+ KCG + +A  +F  M V++   W+ +I  +  HG
Sbjct: 254 HEYVKK--KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHG 311

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
              +A+ +F +M  + V PD + +L +L ACSH+GLVE+ + YF  +     + P I+HY
Sbjct: 312 DGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHY 371

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
            C+VD LGRAG LDEA N ++ + +K +  +W+TLLSAC  HG++E+ + V E +  LD 
Sbjct: 372 GCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDD 431

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
            +  +YV++SN++A  G W +   LRKL + +G+ KV G S VEV+  +H F+ GD  H 
Sbjct: 432 AHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHC 491

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALH-DIQEESKEESLRVHSEKLAIGLALVRGG 636
           ++ ++ + L E+ K +K  +G+V       H D++EE KE  LR HSEKLA+   L    
Sbjct: 492 VSVELRRALDELMKEIK-LVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGL---- 546

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LN  PG  IRV KNLR+CGDCH   K +S I     V+RD  RFHRFE G CSCGD+W
Sbjct: 547 LNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 209/415 (50%), Gaps = 14/415 (3%)

Query: 20  RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID---MYAKCGEMNGACAVFDKMLER 76
           +C S N L     Q+    +K     D+ +   LI+   +      M+ A  +FD++L++
Sbjct: 38  KCTSLNEL----KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDK 93

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +++ +  +  G+ ++ +     SLF ++  S + P+++T S+ +KA     ++  GM +H
Sbjct: 94  DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLH 153

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +K G   N  +  ++I+MY++C  +N A  +FD M    ++++NA+I GY  +   +
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPN 213

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + L LFR++Q     P + T  S + +C  LG++  G  IH ++   GF   VK  +  +
Sbjct: 214 EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVK--VNTA 271

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D + KCG L +A  +F+ +  +   +WS++I+ +A   +  +A+ +F +++   ++ D
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPD 331

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
                 ++   +   LVEQG+  + Y+     G+   + +   +VD+  + G +DEA   
Sbjct: 332 EITFLGLLYACSHAGLVEQGRG-YFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNF 390

Query: 375 FNEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSA 427
            +++ +K   + W  +++    HG  + A  +  ++  LDD        L+ L A
Sbjct: 391 VDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYA 445



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 164/312 (52%), Gaps = 10/312 (3%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           L+ +    +  L+ C+ +  L  G+ LH   VK+G + ++ +   LI+MYA+C +MN A 
Sbjct: 126 LLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAAR 185

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VFD+M +  +VS+ A++ G+ ++      LSLF ++ +S+++P + T+ + I +  +L 
Sbjct: 186 GVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLG 245

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +++ G  IH    K GF+    V  ++IDM++KCG + +A  +F+ M  +    W+AMI 
Sbjct: 246 ALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIV 305

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +   G   K + +F +M+  G  PDE TF   L AC   G V  G    G+  +    Y
Sbjct: 306 AFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG---RGYFYSMSKTY 362

Query: 248 SVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSV-ISWSSLILGYAQEENLAEAMEL 304
            +   I   G +VD   + G L EA    D +E K+  I W +L+   +   N+    E+
Sbjct: 363 GITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNV----EM 418

Query: 305 FRQLRERSLQVD 316
            +++ ER  ++D
Sbjct: 419 AKRVIERIFELD 430


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/566 (35%), Positives = 321/566 (56%), Gaps = 2/566 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+Q H   +K    +D+ + + LI+MY K G M  A  VFD + ERN VSW  ++ G+  
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
              A     LF  M       ++F  ++ + A  V   V  G QIH + +K+G      V
Sbjct: 192 ERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           GN+++ MY KCG +++A + F++   K  ITW+AMI GY  AG S + L LF  M  +G 
Sbjct: 252 GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P EFTF   + AC  +G++  G QIHG+ + +G  Y  +     +LVD Y KCG LV+A
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG--YECQIYFMTALVDMYAKCGSLVDA 369

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R+ FD +++  ++ W+S+I GYAQ      A+ L+ +++   +      ++S++   +  
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +EQGKQIHA   K    L+  + +++  MY KCG +++   +F  MP ++++TW  +I
Sbjct: 430 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 489

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           +G  ++G   +A+ LF ++     +PD V ++ VLSACSH GLVE  + YF  + ++  +
Sbjct: 490 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGI 549

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            PR+EHY+C+VD L RAG+L E K  IES  +   + +W+ LL ACR + + ELG   GE
Sbjct: 550 VPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGE 609

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            L+ L       Y+++S+I+   G  ++ ER+R+L + +G+ K  G SW+E+  ++H F 
Sbjct: 610 KLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFV 669

Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEE 596
            GD  HP   KI   L  +   MK+E
Sbjct: 670 VGDQIHPQIVKICSELRRLRDHMKDE 695



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 279/574 (48%), Gaps = 39/574 (6%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           + L  + +   D L  C++   L  G  +H  L++ G    + L N L+++YAKCG +  
Sbjct: 4   YLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVK 63

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA--KACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
           A  VF+ +  ++VVSW  L+ G+ Q G       + LF +M + +  PN  T S    A+
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAA 123

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
                   G+Q H + +K+   ++  VG+S+I+MY K G + +A ++FD +P ++ ++W 
Sbjct: 124 SSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            +I+GY +   + +   LF  M+      D+F +TS L A      V  G QIH   + +
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G   S+ +V   +LV  Y KCGCL +A + F+L   K  I+WS++I GYAQ  +  EA+ 
Sbjct: 244 GL-LSIASV-GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALN 301

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF  +     +   F    ++   +D   +E+GKQIH Y+ K           ++VDMY 
Sbjct: 302 LFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYA 361

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG + +A + F+ +   ++V WT +I+GY ++G  + A+ L+ +M ++ + P  +   +
Sbjct: 362 KCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMAS 421

Query: 424 VLSACSHSGLVEESQEYFSRL---------------------CND--------KRMKPR- 453
           VL ACS    +E+ ++  ++                      C          +RM  R 
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481

Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           I  ++ ++  L + G   +A  L E +     KP    +  +LSAC   G +E G+    
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFR 541

Query: 511 ILLRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
           ++L   G  P   +Y  M +I + AG  +E +  
Sbjct: 542 MMLDEFGIVPRVEHYACMVDILSRAGKLHETKEF 575



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 144/264 (54%), Gaps = 4/264 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  CS    L+ G Q+HG  +K G+   +     L+DMYAKCG +  A   FD + E ++
Sbjct: 322 INACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDI 381

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V WT+++ G+ QNG  +  L+L+C+M    + P+E T+++ ++A   L+++E G QIH  
Sbjct: 382 VLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQ 441

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K GF     +G+++  MY+KCG + +   +F  MP++ ++TWNAMI+G    G   K 
Sbjct: 442 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKA 501

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +++     PD  TF + L AC  +G V  G +++  ++   F    +      +V
Sbjct: 502 LELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG-KVYFRMMLDEFGIVPRVEHYACMV 560

Query: 259 DFYVKCGCLVEARRVFDLIEQKSV 282
           D   + G L E +   + IE  ++
Sbjct: 561 DILSRAGKLHETK---EFIESATI 581



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 3/160 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  LR CS    L+ G Q+H   +K GFS ++ + + L  MYAKCG +     VF +M 
Sbjct: 419 MASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R++++W A++ G  QNG     L LF ++   + KP+  T    + A   +  VE G +
Sbjct: 479 SRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG-K 537

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFD 172
           ++   M   F   P V +   ++D+ S+ G+++E     +
Sbjct: 538 VYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIE 577


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/537 (37%), Positives = 317/537 (59%), Gaps = 4/537 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   VK+G    +   N L+D Y KCG +     VF++ +E+N VSW +++ G    G
Sbjct: 282 RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 341

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                L+ F  M  +  +PN  T+S+ +     L   + G +IHG  M+ G E +  + N
Sbjct: 342 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 401

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+IDMY+K G   EA+ +F  +  +++++WNAMIA Y L     + +    +MQE GE P
Sbjct: 402 SLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECP 461

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           +  TFT+ L AC  LG +G G +IH   +  G   +    ++ SL+D Y KCGCL  AR 
Sbjct: 462 NAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL--TSDLFVSNSLIDMYAKCGCLHSARN 519

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VF+   +K  +S++ LI+GY++ ++  +++ LF ++R    + D      ++   A+ A 
Sbjct: 520 VFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAA 578

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++QGK++H  A +        VSNS++D Y KCG ID A  LFN++  K+V +W  +I G
Sbjct: 579 LKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILG 638

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           YG  G  + A+ +F  M  D V+ D V+Y+AVLSACSH GLVE   +YFS +   +R++P
Sbjct: 639 YGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEP 697

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
              HY+C+VD LGRAG ++EA  LI+ +P+ P   IW  LL ACR++G++ELGR   E L
Sbjct: 698 TEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHL 757

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
             L   +   Y+++SNI+A+ G W+E  ++R+L +S+G KK  G SWV++  ++H F
Sbjct: 758 FELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAF 814



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 261/512 (50%), Gaps = 10/512 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS +  +  G+++HG + K+GF  D+ + N L+ +Y  CG +N A  +FD+M ER+V
Sbjct: 166 LKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDV 225

Query: 79  VSWTALMCGFLQNGN-AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSW  ++     NG+  +A    F  +  S +KPN  ++ + +  S  L   E   +IH 
Sbjct: 226 VSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHC 285

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K G +      N+++D Y KCG +    ++F+    K+ ++WN++I G    G    
Sbjct: 286 YSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWD 345

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L  FR M + G  P+  T +S L     L     G +IHGF +  G    +   IA SL
Sbjct: 346 ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDI--FIANSL 403

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +D Y K G   EA  +F  +++++++SW+++I  YA      EA+    Q++E     + 
Sbjct: 404 IDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 463

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
              ++++   A    +  GK+IHA   ++    D  VSNS++DMY KCG +  A  +FN 
Sbjct: 464 VTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT 523

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
              K+ V++ ++I GY +     +++ LF +M L   +PD V+++ V+SAC++   +++ 
Sbjct: 524 -SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 582

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
           +E       +  +   +   + ++D   + GR+D A  L   +  K  +A W T++    
Sbjct: 583 KEVHGVALRN-HLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFK-DVASWNTMILGYG 640

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           + G+LE    + E +     D+ V Y ++S I
Sbjct: 641 MIGELETAISMFEAM----RDDTVQYDLVSYI 668



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 216/453 (47%), Gaps = 45/453 (9%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G ++HG  ++MG   D+ + N LIDMYAK G    A  +F  +  RN+VSW A++  +  
Sbjct: 381 GKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYAL 440

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N      +    QM  +   PN  T +  + A   L  +  G +IH M ++ G   +  V
Sbjct: 441 NRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFV 500

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            NS+IDMY+KCG ++ A  +F+    K  +++N +I GY       + L LF +M+  G+
Sbjct: 501 SNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 559

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  +F   + AC +L ++  G ++HG  + +   YS    ++ SL+DFY KCG +  A
Sbjct: 560 KPDVVSFVGVISACANLAALKQGKEVHGVALRNHL-YS-HLFVSNSLLDFYTKCGRIDIA 617

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            R+F+ I  K V SW+++ILGY     L  A+ +F  +R+ ++Q D     +++   +  
Sbjct: 618 CRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHG 677

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            LVE+G Q   ++  +   L+ +  +   +VD+  + G ++EA +L  ++P+        
Sbjct: 678 GLVERGWQY--FSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIA------- 728

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
                                      PD   + A+L AC   G VE  +     L    
Sbjct: 729 ---------------------------PDANIWGALLGACRIYGNVELGRRAAEHLF--- 758

Query: 449 RMKPR-IEHYSCIVDSLGRAGRLDEAKNLIESM 480
            +KP+   +Y  + +     GR DEA  + E M
Sbjct: 759 ELKPQHCGYYILLSNIYAETGRWDEANKIRELM 791



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 221/473 (46%), Gaps = 22/473 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-- 75
           L  CSK   L    Q+H   +  GF    + L   LI  YAK       C++F++  +  
Sbjct: 61  LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC 120

Query: 76  RNVVSWTALMCG--FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           R    W  L+       NG        + +M    V+ ++ T    +K       +  GM
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDG-FETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++HG+  K GF+ +  VGN+++ +Y  CG +N+A R+FD MP + +++WN +I    + G
Sbjct: 180 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 239

Query: 194 -YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            Y++     F  +      P+  +  S L    +L       +IH + +  G    V T 
Sbjct: 240 DYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTT- 298

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +LVD Y KCG +    +VF+   +K+ +SW+S+I G A +    +A+  FR + +  
Sbjct: 299 -CNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 357

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            Q +   +SS++ V  +    + GK+IH ++ ++ +  D  ++NS++DMY K G   EA+
Sbjct: 358 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 417

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F+ +  +N+V+W  +I  Y  + L  EA+    +M      P+ V +  VL AC+  G
Sbjct: 418 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 477

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYS------CIVDSLGRAGRLDEAKNLIES 479
            +   +E  +       M  RI   S       ++D   + G L  A+N+  +
Sbjct: 478 FLGPGKEIHA-------MGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT 523



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 175/373 (46%), Gaps = 23/373 (6%)

Query: 134 QIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYV 190
           Q+H + + +GF    V +  S+I  Y+K         +F+      ++   WN +I  + 
Sbjct: 75  QVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHS 134

Query: 191 LA--GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           +A  G  D G   + +M   G   D+ TF   LK C     +  G ++HG +   GF   
Sbjct: 135 IAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTD 193

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           V   +  +L+  Y  CG L +ARR+FD + ++ V+SW+++I   +   +  EA   +  +
Sbjct: 194 V--YVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWM 251

Query: 309 RERSLQVDGFV-LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKC 365
             RS+     V + S++ + A     E  ++IH Y+ KV  GLD+ V+  N++VD Y KC
Sbjct: 252 ILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKV--GLDSQVTTCNALVDAYGKC 309

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +    ++FNE   KN V+W  II G    G   +A+  FR M+    +P+ V   ++L
Sbjct: 310 GSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSIL 369

Query: 426 SACSHSGLVEESQEY--FSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMP 481
                    +  +E   FS      RM    + +  + ++D   ++G   EA  +  ++ 
Sbjct: 370 PVLVELECFKAGKEIHGFS-----MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLD 424

Query: 482 VKPSIAIWQTLLS 494
            + +I  W  +++
Sbjct: 425 -RRNIVSWNAMIA 436



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  C+    L  G ++HG  ++      L ++N L+D Y KCG ++ AC +F+++L ++V
Sbjct: 570 ISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDV 629

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
            SW  ++ G+   G  +  +S+F  M   +V+ +  +    + A      VE G Q    
Sbjct: 630 ASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSE 689

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDK 197
            +    E   +    ++D+  + G + EAA++   +P A     W A++    + G  + 
Sbjct: 690 MLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVEL 749

Query: 198 GLLLFRKMQEH 208
           G    R+  EH
Sbjct: 750 G----RRAAEH 756


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/713 (31%), Positives = 379/713 (53%), Gaps = 44/713 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C +N+    G Q+HG +VK+G    + + N L+ +Y KCG ++    +F++M ER++
Sbjct: 203 LTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDI 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  ++   ++          F  M     +K + F+LST + A         G Q+H 
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHA 322

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY-------- 189
           + +K G E +  V +S+I  Y+KCG  N+   +F+ MP + +ITW  MI  Y        
Sbjct: 323 LALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDS 382

Query: 190 ------------------VLAGYS-----DKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
                             VLAG S      + L LF +M E G    + T TS + ACG 
Sbjct: 383 AVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGL 442

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF--DLIEQKSVIS 284
           L S     QI GF++  G      + I  +LVD Y +CG + +A ++F    +E      
Sbjct: 443 LKSFKVSQQIQGFVMKFGI--LSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAM 500

Query: 285 WSSLILGYAQEENLAEAMELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
            +S+I GYA+   L EA+ LF     E ++ +D  + +S++ +       E GKQ+H +A
Sbjct: 501 LTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHA 560

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     +T V N+ V MY KC  +D+A  +FN M ++++V+W  ++ G+  H    +A+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHS--GLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           G+++KM    ++PD + +  ++SA  H+   LV+  +  F  +  +  +KP +EHY+  +
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
             LGR G L+EA+  I +MP++P + +W+ LL++CR++ +  L +     +L ++  +P+
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
           +Y++ SN+++ +G W   E++R+  R KG +K   +SW+  + +IH FY  D +HP  + 
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I+  L E+      ++G+V    + L +++E  K+E L  HS KLA       G L  +P
Sbjct: 801 IYSGL-EILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATF----GILMTKP 855

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           GK I++ KN+R+CGDCH F+K +S + +   ++RD + FH F  G CSC DYW
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 212/458 (46%), Gaps = 39/458 (8%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D LR  ++    D    +H   +K+    D+ L N LI  Y K G +  A  VF  +   
Sbjct: 102 DLLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCP 159

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVS+TAL+ GF ++      + LF  M  S ++PNE+T    + A       + G Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G+ +K G      + N+++ +Y KCG ++   R+F+ MP + + +WN +I+  V     D
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 197 KGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +    FR MQ   G   D F+ ++ L AC        G Q+H   +  G    +   ++ 
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLS--VSS 337

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY----------------------- 292
           SL+ FY KCG   +   +F+ +  + VI+W+ +I  Y                       
Sbjct: 338 SLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCIS 397

Query: 293 --------AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
                   ++ ++ + A+ELF ++ E  +++    L+S++         +  +QI  +  
Sbjct: 398 YNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVM 457

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT--WTVIITGYGKHGLAKEA 402
           K     ++ +  ++VDMY +CG +++A ++F +  ++N  T   T +I GY ++G   EA
Sbjct: 458 KFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEA 517

Query: 403 VGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQE 439
           + LF     +  +  D V   ++LS C   G  E  ++
Sbjct: 518 ISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQ 555



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 77/453 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN---------- 64
           L+  L  C+ ++    G QLH   +K+G    L +++ LI  Y KCG  N          
Sbjct: 301 LSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMP 360

Query: 65  ---------------------GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                 A  VF+KM +RN +S+ A++ G  +N +    L LF +
Sbjct: 361 IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIE 420

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M    V+ ++ TL++ I A G+L S +   QI G  MK G   N  +  +++DMY++CGR
Sbjct: 421 MLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480

Query: 164 INEAARMFDVMPAKSLIT--WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTST 220
           + +A ++F     ++  T    +MI GY   G  ++ + LF   Q  G I  DE   TS 
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSI 540

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L  CGS+G    G Q+H   + SG     +T +  + V  Y KC  + +A RVF+ +  +
Sbjct: 541 LSLCGSIGFHEMGKQMHCHALKSGL--ITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQ 598

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            ++SW+ L+ G+       +A+ +++++ +  ++ D             FAL+     I 
Sbjct: 599 DIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSIT----------FALI-----IS 643

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV-----IITGYGK 395
           AY                   + +  L+D    LF  M  ++ +  T+      I+  G+
Sbjct: 644 AYK------------------HTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGR 685

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            GL +EA    R M L   EPD   + A+L++C
Sbjct: 686 WGLLEEAEQTIRNMPL---EPDVYVWRALLNSC 715



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 128/257 (49%), Gaps = 3/257 (1%)

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +L+  Y+K G + +A +VF  +   +V+S+++LI G+++ +   EA+ELF  + +  
Sbjct: 132 LGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSG 191

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ + +   +++         + G Q+H    K+       + N+++ +Y KCG +D   
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHS 431
            LF EMP +++ +W  +I+   K     EA   FR M L   ++ D  +   +L+AC+ S
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
               + Q+  + L     ++  +   S ++    + G  ++  +L E+MP++  I  W  
Sbjct: 312 VKPMKGQQLHA-LALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT-WTG 369

Query: 492 LLSACRVHGDLELGREV 508
           ++++    G L+   EV
Sbjct: 370 MITSYMEFGMLDSAVEV 386



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T YG   LA+     F K+     E D     A++SA    GLV ++ + FS L      
Sbjct: 108 TRYGDPDLARAVHAQFLKL-----EEDIFLGNALISAYLKLGLVRDADKVFSGLSC---- 158

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGRE 507
            P +  Y+ ++    ++   DEA  L  +M    ++P+   +  +L+AC  + D +LG +
Sbjct: 159 -PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQ 217

Query: 508 VGEILLRL 515
           V  I+++L
Sbjct: 218 VHGIVVKL 225


>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
 gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
          Length = 811

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/680 (33%), Positives = 353/680 (51%), Gaps = 30/680 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  ++  CS    LD G  +H  +          L N L++MY +C E++ A   F+K+ 
Sbjct: 132 LLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAFEKIT 191

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +N+VSW  ++  + Q G+    + LF +M    V  +  T    + A G + +  +  +
Sbjct: 192 AKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEAAGDVRR 251

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH     SG EW+  V +S+++ Y KCG + EA R+FD MP K+ +T  +M+A Y   G 
Sbjct: 252 IHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHGL 311

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            ++ L ++R+M+  G   D  TF S L AC S+G++  G  IH  L+ SG       V+ 
Sbjct: 312 GEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVLG 371

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L++ Y +CG L  A+ +FD +  K+ I+W++L+  YAQ     EA+ L+  +     Q
Sbjct: 372 TALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSM---DAQ 428

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEAT 372
            +     +M+   +    + QG+  HA  A  P+G   +  V  ++V+MY KCG +++A 
Sbjct: 429 PNSLTFLAMLTACSTVGALLQGRAAHARLA--PAGFEKEVEVGVALVNMYGKCGSLEDAL 486

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
             F ++  K VVTWTV +     HG  +E + LF +M LD V PD VA LA L ACSHSG
Sbjct: 487 GTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSG 546

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            ++E + YF+ +  D  + P + HY C+VD L R G L  A+ LI+SMP +PS   W TL
Sbjct: 547 KLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTL 606

Query: 493 LSACRVHGDL-ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           L+ACR H  L +  +   +  L  +  N   Y  +S +++   ++ + ERL    +   +
Sbjct: 607 LAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYSGVRTYRQ-ERLNVSDKLNSI 665

Query: 552 KKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           ++  GR ++E   +IH    G+   HP    + + L     R+  EL    G K     +
Sbjct: 666 QRQVGRCFIETRNQIHEIVAGETAAHPYAAAVDEEL----HRLNIELTIERGCK-----V 716

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
           +E++       HS K A+ L LV    +  PG  IRV KNL++C DCH  IK  SKI   
Sbjct: 717 EEKN-------HSAKRAVVLGLV----STLPGTTIRVVKNLKLCADCHHAIKLFSKIRGR 765

Query: 671 VFVVRDATRFHRFEGGVCSC 690
             +VRD   FH  E GVCSC
Sbjct: 766 RIIVRDYVEFHHIEKGVCSC 785



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 258/493 (52%), Gaps = 17/493 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFD--KMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           D ++   L+DMY+KCG ++ A  VFD   +  + +  WTA++ G+  +G+++  L L+ +
Sbjct: 59  DDLVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQR 118

Query: 104 MGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
             S SS  P+   L + I A      +++G  IH        + +  +GN +++MY +C 
Sbjct: 119 FLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCK 178

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            ++ A + F+ + AK+L++WN +I  Y   G+    + LF++M   G   D  TF   L 
Sbjct: 179 ELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLD 238

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           ACG + + G   +IH  L  SG  + V   +A SLV+ Y KCGCL EA+RVFD +  K+ 
Sbjct: 239 ACGGVEAAGDVRRIHKKLELSGLEWDV--FVASSLVNAYGKCGCLAEAKRVFDTMPLKNT 296

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA- 341
           ++ +S++  YAQ     EA+E++R++  +  + D     S +   +    + QG+ IH+ 
Sbjct: 297 VTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSR 356

Query: 342 -YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
              + +    D  +  ++++MY +CG++D A  LF+ M  KN +TW  ++  Y + G  K
Sbjct: 357 LLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGK 416

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+ L+  M   D +P+ + +LA+L+ACS  G + + +   +RL      +  +E    +
Sbjct: 417 EALNLYHSM---DAQPNSLTFLAMLTACSTVGALLQGRAAHARLA-PAGFEKEVEVGVAL 472

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL--LRLDGD 518
           V+  G+ G L++A      +  K ++  W   + A   HG+    RE   +   + LDG 
Sbjct: 473 VNMYGKCGSLEDALGTFAKLERK-TVVTWTVAMLALAHHGEF---RETLRLFTEMELDGV 528

Query: 519 NPVNYVMMSNIHA 531
            P +  +++ + A
Sbjct: 529 APDSVALLAALFA 541



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 189/355 (53%), Gaps = 7/355 (1%)

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           E + +V  +++DMYSKCG +++A R+FD   + +K +  W AM++GY L G+S + L L+
Sbjct: 57  EEDDLVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELY 116

Query: 203 RK-MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           ++ +    E PD     S + AC S   +  G  IH  + +    +   T +   LV+ Y
Sbjct: 117 QRFLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDH--HTHLGNGLVNMY 174

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
            +C  L  AR+ F+ I  K+++SW+ +I  YAQE +   AMELF+++    +  D     
Sbjct: 175 GRCKELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFL 234

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
            ++            ++IH          D  V++S+V+ Y KCG + EA  +F+ MP+K
Sbjct: 235 HVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLK 294

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           N VT T ++  Y +HGL +EA+ ++R+M     + D V +++ L ACS  G + + +   
Sbjct: 295 NTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIH 354

Query: 442 SR-LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           SR L +    +P +   + +++  GR G LD AK+L + M  K +I  W  L+ +
Sbjct: 355 SRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTI-TWNALMGS 408



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 18/181 (9%)

Query: 331 ALVEQGKQIHA-------------YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           A + QG+++H               A  V    D  V+ ++VDMY KCG +D+A  +F++
Sbjct: 26  AFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVATALVDMYSKCGSLDDARRVFDD 85

Query: 378 MPV--KNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLV 434
             V  K +  WT +++GY  HG +++A+ L+++ L +    PD V  L+ ++ACS +  +
Sbjct: 86  YSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSEPPDTVMLLSAITACSSAEFL 145

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           ++ +   +++ + + +       + +V+  GR   L  A+   E +  K ++  W  ++ 
Sbjct: 146 DDGRAIHAQI-SSRELDHHTHLGNGLVNMYGRCKELHRARKAFEKITAK-NLVSWNVIIG 203

Query: 495 A 495
           A
Sbjct: 204 A 204


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/622 (34%), Positives = 343/622 (55%), Gaps = 65/622 (10%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSII------DMYSKCGRINEAARMFDVMPAKSLIT 181
           ++ +  QIH + +KSG   + +    I+      D++ +   ++ A ++F+ MP ++  +
Sbjct: 35  TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 92

Query: 182 WNAMIAGYVLAGYSDKGL----LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           WN +I G+  +   DK L    L +  M +    P+ FTF S LKAC   G +  G QIH
Sbjct: 93  WNTIIRGFSESD-EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR-------------------------- 271
           G  +  GF       +  +LV  YV CG + +AR                          
Sbjct: 152 GLALKYGF--GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209

Query: 272 -------------------RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
                               +FD + Q+SV+SW+++I GY+      +A+E+FR++++  
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ +   L S++   +    +E G+ +H YA      +D  + ++++DMY KCG+I++A 
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F  +P +NV+TW+ +I G+  HG A +A+  F KM    V P  VAY+ +L+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           LVEE + YFS++ +   ++PRIEHY C+VD LGR+G LDEA+  I +MP+KP   IW+ L
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           L ACR+ G++E+G+ V  IL+ +   +   YV +SN++A  G+W+E   +R   + K ++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           K  G S +++D  +H F   DD+HP  ++I+ +L+E+  +++   G+       L +++E
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA-GYRPITTQVLLNLEE 568

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
           E KE  L  HSEK+A    L+    +  PGK IR+ KNLR+C DCH  IK +SK+ K   
Sbjct: 569 EDKENVLHYHSEKIATAFGLI----STSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
            VRD  RFH F+ G CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 226/476 (47%), Gaps = 60/476 (12%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCG----EMNGACAVFDKMLERNVVSWTALMCGF 88
           Q+H   +K G   D +   +++   A       +++ A  +F++M +RN  SW  ++ GF
Sbjct: 41  QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100

Query: 89  LQNGNAKA--CLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
            ++   KA   ++LF +M S   V+PN FT  + +KA      ++ G QIHG+ +K GF 
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160

Query: 146 WNPVVGNSIIDMYSKCGRINE--------------------------------------- 166
            +  V ++++ MY  CG + +                                       
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220

Query: 167 -----AARM-FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
                AARM FD M  +S+++WN MI+GY L G+    + +FR+M++    P+  T  S 
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L A   LGS+  G  +H +   SG    +  V+  +L+D Y KCG + +A  VF+ + ++
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGI--RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
           +VI+WS++I G+A      +A++ F ++R+  ++       +++   +   LVE+G++  
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398

Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           +    V  GL+  + +   +VD+  + GL+DEA E    MP+K + V W  ++      G
Sbjct: 399 SQMVSV-DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC-NDKRMKP 452
              E       +L+D V  D  AY+A+ +  +  G   E  E   R+   D R  P
Sbjct: 458 NV-EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 58/335 (17%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR +F  V         L+ C+K   +  G Q+HG  +K GF  D  + ++L+ MY  CG
Sbjct: 127 NRFTFPSV---------LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG 177

Query: 62  EMN-----------------------------------------GACA----VFDKMLER 76
            M                                          G C     +FDKM +R
Sbjct: 178 FMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQR 237

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +VVSW  ++ G+  NG  K  + +F +M    ++PN  TL + + A   L S+E G  +H
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
                SG   + V+G+++IDMYSKCG I +A  +F+ +P +++ITW+AMI G+ + G + 
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT-SGFPYSVKTVIAG 255
             +  F KM++ G  P +  + + L AC   G V  G +    +++  G    ++    G
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY--G 415

Query: 256 SLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
            +VD   + G L EA   + ++  +   + W +L+
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G  LH      G   D +L + LIDMY+KCG +  A  VF+++   NV++W+A++ G
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMING 349

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG-MCMKSGFEW 146
           F  +G A   +  FC+M  + V+P++      + A      VE G +    M    G E 
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKG 198
                  ++D+  + G ++EA      MP K   + W A++    + G  + G
Sbjct: 410 RIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/584 (35%), Positives = 331/584 (56%), Gaps = 2/584 (0%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +R  LA ++  CS    L+ G Q HG   ++    D  + N LID+Y KC  ++ A  +F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
           D M  RN+VSWT ++ G++QN      +++F Q+     +P+ F  ++ + + G L+++ 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G Q+H   +K+  E +  V NS+IDMY+KC  + EA  +F+ +     I++NAMI GY 
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G     + +F KM+     P   TF S L    S  ++    QIHG ++ SG   S+ 
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSG--TSLD 451

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
                SL+D Y K   + +A+ VF+L+  + ++ W+++I G AQ E   EA++LF QL+ 
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             L  + F   +++ V +    +  G+Q HA   K  +  D  VSN+++DMY KCG I E
Sbjct: 512 SGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKE 571

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
              LF     K+V+ W  +I+ Y +HG A+EA+ +FR M    VEP+ V ++ VLSAC+H
Sbjct: 572 GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAH 631

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLV+E   +F  +     ++P  EHY+ +V+  GR+G+L  AK  IE MP++P+ A+W+
Sbjct: 632 AGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWR 691

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LLSAC + G++E+GR   E+ L  D  +    V+MSNI+A  G W++ ++LR+     G
Sbjct: 692 SLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAG 751

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
           + K  G SW+EV KE+H F      HP  + I+ +L E+   +K
Sbjct: 752 VVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILK 795



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 270/490 (55%), Gaps = 6/490 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA +LR C+++  + +G Q+HG  V++G   ++ +   LI++YAK G ++ A  VFD + 
Sbjct: 117 LASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALP 176

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +N V+WTA++ G+ Q G     L LF +MG   V+P+ F L++ + A   L  +E G Q
Sbjct: 177 VKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQ 236

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
            HG   +   E +  V N++ID+Y KC R++ A ++FD M  ++L++W  MIAGY+    
Sbjct: 237 THGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSC 296

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + +F ++ + G  PD F   S L +CGSL ++  G Q+H   I +         + 
Sbjct: 297 DAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANL--ESDEYVK 354

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            SL+D Y KC  L EAR VF+ + +   IS++++I GY++  +LA A+++F ++R  SL+
Sbjct: 355 NSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLK 414

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                  S++GV +  + +E  KQIH    K  + LD    +S++D+Y K  L+++A  +
Sbjct: 415 PSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAV 474

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           FN M  +++V W  +I G  ++   +EAV LF ++ +  + P+   ++A+++  S    +
Sbjct: 475 FNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSM 534

Query: 435 EESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              Q++ +++   K       H S  ++D   + G + E + L ES   K  I  W +++
Sbjct: 535 FHGQQFHAQII--KAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVIC-WNSMI 591

Query: 494 SACRVHGDLE 503
           S    HG  E
Sbjct: 592 STYAQHGQAE 601



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 248/465 (53%), Gaps = 14/465 (3%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
           H   V  G   DL L N L+  Y+K G +  A  +FD+M  +N+VSW + +    Q+G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 95  KACLSLFC--QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           +  ++LF   Q  S    PNEF L++ ++A     +V  G Q+HG+ ++ G + N  VG 
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++I++Y+K G I+ A  +FD +P K+ +TW A+I GY   G     L LF KM   G  P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT--VIAGSLVDFYVKCGCLVEA 270
           D F   S + AC +LG + GG Q HG+     +  +V+T   +  +L+D Y KC  L  A
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGY----AYRIAVETDASVINALIDLYCKCSRLSLA 269

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           R++FD +E ++++SW+++I GY Q    AEAM +F QL +   Q D F  +S++      
Sbjct: 270 RKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSL 329

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A + QG+Q+HA+A K     D  V NS++DMY KC  + EA  +F  +   + +++  +I
Sbjct: 330 AAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 389

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY + G    A+ +F KM    ++P  + ++++L   S    +E S++    +    + 
Sbjct: 390 EGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIV---KS 446

Query: 451 KPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
              ++ Y  S ++D   +   +++AK +   M  +  + IW  ++
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR-DMVIWNAMI 490



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 20/233 (8%)

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLA 399
           HA A    +  D  ++N ++  Y K G + +A  LF+ MP KN+V+W   I+ + +HG  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 400 KEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
           ++AV LF           P+     + L AC+ S  V   Q+    +     +   +   
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHG-VAVRIGLDGNVYVG 152

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILL 513
           + +++   + G +D A  + +++PVK  +  W  +++     G     LEL  ++G    
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVT-WTAVITGYSQIGQGGVALELFGKMG---- 207

Query: 514 RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
            LDG  P  +V+ S + A       C  L  L   +     A R  VE D  +
Sbjct: 208 -LDGVRPDRFVLASAVSA-------CSALGFLEGGRQTHGYAYRIAVETDASV 252


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/568 (37%), Positives = 333/568 (58%), Gaps = 15/568 (2%)

Query: 134 QIHGMCMKSG-FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           Q+H + ++SG F  +P   ++++ MY  C R  +A R FD +P  + +   AM +GYV  
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 193 GYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
                 L LFR M   +   + DE        A   +   G    +H  +   GF  +  
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 251 TVIAGSLVDFYVKCGC--LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
            V   +++D Y K G   L  AR+VFD +E + V+SW+S+I  YAQ    AEA+ L+ ++
Sbjct: 234 VV--NTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKM 290

Query: 309 RERS--LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
                 ++ +   LS+++   A    ++ GK+IH    ++    +  V  SIVDMY KCG
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCG 350

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            ++ A+  F ++  KN+++W+ +ITGYG HG  +EA+ +F +M    + P+ + +++VL+
Sbjct: 351 RVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLA 410

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACSH+GL++E + +++ +  +  ++  +EHY C+VD LGRAG LDEA +LI+ M VKP  
Sbjct: 411 ACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDA 470

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
           AIW  LLSACR+H ++EL     + L  LD  N   YV++SNI+A+A  W + ER+R L 
Sbjct: 471 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLV 530

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
           +++ ++K  G S  E+  +I+ FY GD +HP   +I+  L ++ +RM +E G+V      
Sbjct: 531 KTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERM-QEAGYVPNTGSV 589

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           LHD+ EE KE +LR+HSEKLA+  AL    +N  P  VI + KNLRVC DCH  +K ++K
Sbjct: 590 LHDLDEEEKESALRIHSEKLAVAFAL----MNSVPRSVIHIIKNLRVCSDCHTAMKFITK 645

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           I +   ++RD  RFH F+ G+CSC DYW
Sbjct: 646 ITEREIIIRDLQRFHHFKDGLCSCRDYW 673



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 188/376 (50%), Gaps = 26/376 (6%)

Query: 33  QLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           QLH   ++ G F  D    + L+ MY  C     A   FD++ + N V  TA+  G+++N
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 92  GNAKACLSLFCQM---GSSSVKPN-----EFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
                 L LF  M    S+SV         F+ S  +   GV +S      +H +  K G
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTAS------LHALIAKIG 227

Query: 144 FEWNPVVGNSIIDMYSKCG-RINEAAR-MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           FE N  V N+++D Y+K G R  E AR +FD M  + +++WN+MIA Y   G S + + L
Sbjct: 228 FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGL 286

Query: 202 FRKMQE--HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           + KM     G   +    ++ L AC   G++  G +IH  ++  G   +V   +  S+VD
Sbjct: 287 YSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENV--YVGTSIVD 344

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG +  A R F  I++K+++SWS++I GY       EA+E+F +++   L+ +   
Sbjct: 345 MYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYIT 404

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNE 377
             S++   +   L+++G+  +  A K   G++  V +   +VD+  + G +DEA  L  E
Sbjct: 405 FISVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKE 463

Query: 378 MPVK-NVVTWTVIITG 392
           M VK +   W  +++ 
Sbjct: 464 MKVKPDAAIWGALLSA 479



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 6/178 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+    +  G ++H  +V+MG   ++ +   ++DMY+KCG +  A   F K+ 
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVEN 131
           E+N++SW+A++ G+  +G  +  L +F +M  S ++PN  T  + + A   +G+L   E 
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLD--EG 421

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
               + M  + G E        ++D+  + G ++EA  +   M  K     W A+++ 
Sbjct: 422 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 335/572 (58%), Gaps = 3/572 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  LVK G   D+++ + L+ MYAKC E   A  +FD+M +++V  W  ++  + Q
Sbjct: 125 GQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQ 184

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G  +  L  F  M     +P+  T++T I +   L  ++ G +IH   + SGF  +  V
Sbjct: 185 SGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFV 244

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             +++DMY KCG++  A  +F+ MP K+++ WN+MI GY   G     + LF++M   G 
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGV 304

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P   T TSTL AC     +  G  +HG++I +     +   +  SL+D Y KCG +  A
Sbjct: 305 KPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDI--FLNSSLMDLYFKCGKVESA 362

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             +F L+ + + +SW+ +I GY  E  L +A+ LF ++ +  ++ D    +S++   +  
Sbjct: 363 ETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQL 422

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +E+G++IH    +   G +  V  +++DMY KCG ++EA  +F  +P +++V+WT +I
Sbjct: 423 AALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMI 482

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T YG HG   EA+ LF +ML  +V+PD V +LA+LSACSH+GLV++   +F+++ N   +
Sbjct: 483 TAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGI 542

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLSACRVHGDLELGREVG 509
            PRIEHYSC++  LGRAGRL EA  +++S P +     +  TL SACR+H +L+LG E+ 
Sbjct: 543 IPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIA 602

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E L+  D D+   Y+++SN++A  G W+E   +R   +  GLKK  G SW+E++++I  F
Sbjct: 603 ENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPF 662

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +  D++H   E I  +L  +   M++E   +Y
Sbjct: 663 FVEDNSHYHLEGIGNILSYLTSHMEDECKPIY 694



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 256/492 (52%), Gaps = 6/492 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           + ++L   LR    +  L  G  LH  +V +G   D+ +  +LI +Y  C   + A  VF
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 71  DKMLERNVVSW-TALMCGFLQNGNAKACLSLFCQ-MGSSSVKPNEFTLSTNIKASGVLSS 128
           D +     +S    LM G+ +N      L LF + M    +KP+ +T  + +KA G L  
Sbjct: 62  DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V  G  IH   +K G   + VVG+S++ MY+KC     A ++FD MP K +  WN +I+ 
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISC 181

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y  +G  ++ L  F  M+  G  PD  T T+ + +C  L  +  G +IH  L+ SGF   
Sbjct: 182 YYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGF--R 239

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           + + ++ +LVD Y KCG L  A  VF+ +  K+V++W+S+I GY  + +    ++LF+++
Sbjct: 240 MDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRM 299

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
               ++     L+S +   +  A + +GK +H Y  +     D  +++S++D+Y KCG +
Sbjct: 300 YSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKV 359

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           + A  +F  MP    V+W V+I+GY   G   +A+ LF +M    VEPD + + +VL+AC
Sbjct: 360 ESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAAC 419

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           S    +E+ +E    L  ++ +         ++D   + G ++EA  + + +P +  ++ 
Sbjct: 420 SQLAALEKGRE-IHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVS- 477

Query: 489 WQTLLSACRVHG 500
           W ++++A   HG
Sbjct: 478 WTSMITAYGSHG 489



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 201/379 (53%), Gaps = 11/379 (2%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F    +   +  ++  C++ L LD G ++H  LV  GF  D  ++  L+DMY KCG++  
Sbjct: 201 FGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEM 260

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
           A  VF++M  + VV+W +++ G+   G+  +C+ LF +M S  VKP   TL++ + A   
Sbjct: 261 AIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQ 320

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
            + +  G  +HG  +++  + +  + +S++D+Y KCG++  A  +F +MP  + ++WN M
Sbjct: 321 SAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVM 380

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I+GYV  G     L LF +M +    PD  TFTS L AC  L ++  G +IH  ++    
Sbjct: 381 ISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNL 440

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
                 V+ G+L+D Y KCG + EA  VF  + ++ ++SW+S+I  Y     + EA+ELF
Sbjct: 441 --GNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELF 498

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVD 360
            ++ + +++ D     +++   +   LV+ G     + I+ Y   +P     S    ++ 
Sbjct: 499 AEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGI-IPRIEHYSC---LIT 554

Query: 361 MYLKCGLIDEATELFNEMP 379
           +  + G + EA E+    P
Sbjct: 555 LLGRAGRLHEAYEILQSNP 573


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/549 (38%), Positives = 317/549 (57%), Gaps = 39/549 (7%)

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           ++ +WN++IA    +G S + L  F  M++    P+  TF   +K+C +L  +  G Q H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
              +  GF   +   ++ +LVD Y KCG L +AR +FD I  ++++SW+S+I GY Q ++
Sbjct: 100 QQALIFGFEPDL--FVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 157

Query: 298 L-------------------------------AEAMELF-RQLRERSLQVDGFVLSSMMG 325
                                            E+ME+F R +++  +  +   LS+++ 
Sbjct: 158 AHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLL 217

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             A       GK IH    K+    +  V  SI+DMY KCG ++ A + F+ M  KNV +
Sbjct: 218 ACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKS 277

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W+ ++ GYG HG AKEA+ +F +M +  V+P+ + +++VL+ACSH+GL+EE   +F  + 
Sbjct: 278 WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS 337

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           ++  ++P +EHY C+VD LGRAG L EA +LI+ M ++P   +W  LL ACR+H +++LG
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
                 L  LD  N   YV++SNI+ADAG W + ER+R L ++ GL K  G S V++   
Sbjct: 398 EISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 457

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  EKI++ L ++  ++ +E+G+V  +   LHD+  E KE  LRVHSEK
Sbjct: 458 VHVFLVGDREHPQHEKIYEYLEKLSMKL-QEVGYVPDMTSVLHDVGHEEKEMVLRVHSEK 516

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+      G +N  PG  I + KNLRVCGDCH  IK +SKI+    VVRD+ RFH F  
Sbjct: 517 LAVAF----GIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRD 572

Query: 686 GVCSCGDYW 694
           G+CSCGDYW
Sbjct: 573 GLCSCGDYW 581



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 155/325 (47%), Gaps = 50/325 (15%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
            SL   R     +++ CS  L L  G Q H   +  GF  DL +++ L+DMY+KCGE+  
Sbjct: 70  LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 129

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF------------------CQMGSS 107
           A  +FD++  RN+VSWT+++ G++QN +A   L +F                   Q G S
Sbjct: 130 ARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMS 189

Query: 108 S--------------VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           +              +  N  TLS  + A     S   G  IH   +K G E N  VG S
Sbjct: 190 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 249

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
           IIDMY KCG++  A + FD M  K++ +W+AM+AGY + G++ + L +F +M   G  P+
Sbjct: 250 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 309

Query: 214 EFTFTSTLKACGSLGSVGGG-----TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
             TF S L AC   G +  G        H F +  G  +       G +VD   + G L 
Sbjct: 310 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH------YGCMVDLLGRAGYLK 363

Query: 269 EARRVFDLIE----QKSVISWSSLI 289
           EA   FDLI+    +   + W +L+
Sbjct: 364 EA---FDLIKGMKLRPDFVVWGALL 385



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 189/396 (47%), Gaps = 43/396 (10%)

Query: 68  AVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +F+K +++ NV SW +++    ++G++   L  F  M   S+KPN  T    IK+   L
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA------------------ 168
             + +G Q H   +  GFE +  V ++++DMYSKCG + +A                   
Sbjct: 90  LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149

Query: 169 -------------RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DE 214
                        R+FD M  + +I+WN++IA Y   G S + + +F +M + GEI  + 
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209

Query: 215 FTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF 274
            T ++ L AC   GS   G  IH  +I  G   +V   +  S++D Y KCG +  AR+ F
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV--FVGTSIIDMYCKCGKVEMARKAF 267

Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
           D + +K+V SWS+++ GY    +  EA+E+F ++    ++ +     S++   +   L+E
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327

Query: 335 QGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
           +G    +  ++   V  G++      +VD+  + G + EA +L   M ++ + V W  ++
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEH--YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                H          RK+   +++P    Y  +LS
Sbjct: 386 GACRMHKNVDLGEISARKLF--ELDPKNCGYYVLLS 419



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  C+ +     G  +H  ++KMG   ++ +   +IDMY KCG++  A   FD+M 
Sbjct: 212 LSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR 271

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           E+NV SW+A++ G+  +G+AK  L +F +M  + VKPN  T  + + A      +E G  
Sbjct: 272 EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH 331

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
                M   F+  P V +   ++D+  + G + EA  +   M  +   + W A++    +
Sbjct: 332 WFK-AMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRM 390

Query: 192 AGYSDKGLLLFRKMQE 207
               D G +  RK+ E
Sbjct: 391 HKNVDLGEISARKLFE 406


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 224/623 (35%), Positives = 348/623 (55%), Gaps = 16/623 (2%)

Query: 77  NVVSWTALMCGFLQNGNAKACL----SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           N+ + T+L   F+Q+   +  L     L C +  S    ++F  +  +     L    + 
Sbjct: 39  NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSA 98

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           + ++G   K     N +  N +I+ Y + G +  A ++FD MP + L TWNAMIAG +  
Sbjct: 99  VAVYGRMRKK----NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQF 154

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            ++++GL LFR+M   G  PDE+T  S       L SV  G QIHG+ I  G    +  V
Sbjct: 155 EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL--ELDLV 212

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL   Y++ G L +   V   +  +++++W++LI+G AQ       + L++ ++   
Sbjct: 213 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 272

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            + +     +++   +D A+  QG+QIHA A K+ +    +V +S++ MY KCG + +A 
Sbjct: 273 CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAA 332

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS 431
           + F+E   ++ V W+ +I+ YG HG   EA+ LF  M    ++E + VA+L +L ACSHS
Sbjct: 333 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 392

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GL ++  E F  +      KP ++HY+C+VD LGRAG LD+A+ +I SMP+K  I IW+T
Sbjct: 393 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 452

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLSAC +H + E+ + V + +L++D ++   YV+++N+HA A  W +   +RK  R K +
Sbjct: 453 LLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNV 512

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK AG SW E   E+H F  GD +   +++I+  L E+   MK + G+       LHD+ 
Sbjct: 513 KKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMD 571

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
           EE KE  L  HSEKLA+  AL+   L E  G  IR+ KNLRVC DCH   K +S I    
Sbjct: 572 EEEKESDLVQHSEKLAVAFALMI--LPE--GAPIRIIKNLRVCSDCHVAFKYISVIKNRE 627

Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
             +RD +RFH F  G CSCGDYW
Sbjct: 628 ITLRDGSRFHHFINGKCSCGDYW 650



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 217/463 (46%), Gaps = 46/463 (9%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
            R   ++ +        ++ C+    L  G QLH  LV  GFS D  + N L+ MY+K G
Sbjct: 34  QRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLG 93

Query: 62  EMNGACAV-------------------------------FDKMLERNVVSWTALMCGFLQ 90
           +   A AV                               FD+M +R + +W A++ G +Q
Sbjct: 94  DFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQ 153

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  LSLF +M      P+E+TL +    S  L SV  G QIHG  +K G E + VV
Sbjct: 154 FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 213

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S+  MY + G++ +   +   MP ++L+ WN +I G    G  +  L L++ M+  G 
Sbjct: 214 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 273

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ TF + L +C  L   G G QIH   I  G   S    +  SL+  Y KCGCL +A
Sbjct: 274 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG--ASSVVAVVSSLISMYSKCGCLGDA 331

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFAD 329
            + F   E +  + WSS+I  Y       EA+ELF  + E++ ++++     +++   + 
Sbjct: 332 AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 391

Query: 330 FALVEQGKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NV 383
             L ++G +     +  Y  K   GL       +VD+  + G +D+A  +   MP+K ++
Sbjct: 392 SGLKDKGLELFDMMVEKYGFK--PGLKHYT--CVVDLLGRAGCLDQAEAIIRSMPIKTDI 447

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           V W  +++    H  A+ A  +F+++L   ++P+  A   +L+
Sbjct: 448 VIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLA 488


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/582 (36%), Positives = 335/582 (57%), Gaps = 11/582 (1%)

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
           T    I A   L S+    ++    + +GFE +  + N ++ M+ KCG + +A R+FD M
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193

Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           PA++ ++W  +I+GYV +G   +   LF  M+E        TF + ++A   L  +  G 
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR 253

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+H   I +G    +   ++ +L+D Y KCG L +A  VFD +  K+++ W+S+I GYA 
Sbjct: 254 QLHSCAIKAGLGQDI--FVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA++L+ ++R+  +++D F  S ++ + +  A V + KQ+HA   +   GLD   
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVA 371

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
           + ++VD Y K G +D+A  +F+ M  +N+++W  +I GYG HG  +EA+ +F KML + +
Sbjct: 372 NTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGM 431

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
            P+ V +LAVLSACS SGL E   E F  +  D ++KPR  H++C+++ LGR G LDEA 
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAY 491

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
            LI   P +P+  +W  LL ACRVHG+LELG+   E L  ++ +   NY+++ NI+  +G
Sbjct: 492 ALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSG 551

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
              E   + +  + KGL+ +   SW+EV+ + H F  GD  H   EK+   + E+   + 
Sbjct: 552 KLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNI- 610

Query: 595 EELGFVYGVK-YALHDIQEESKEESLRV-HSEKLAIGLALVRGGLNEQPGKVIRVFKNLR 652
            +LG+V   + + L D+ E   EE +R+ HSEKLAI   L    LN      +++ ++ R
Sbjct: 611 SKLGYVPEEQNFMLPDVDE--NEEKIRMYHSEKLAIAYGL----LNTLEKTPLQIVQSHR 664

Query: 653 VCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +C DCH  IK ++ I K   V+RDA+RFH F  G CSCGDYW
Sbjct: 665 ICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 222/418 (53%), Gaps = 13/418 (3%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           +L   +V  GF  D  + N ++ M+ KCG M  AC +FD+M  RN VSW  ++ G++ +G
Sbjct: 153 RLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSG 212

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N      LF  M          T +T I+AS  L  +  G Q+H   +K+G   +  V  
Sbjct: 213 NYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSC 272

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++IDMYSKCG + +A  +FD MP K+++ WN++IAGY L GYS++ L L+ +M++ G   
Sbjct: 273 ALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKM 332

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FTF+  ++ C  L SV    Q+H  L+ +GF   V  V   +LVDFY K G + +AR 
Sbjct: 333 DHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDV--VANTALVDFYSKWGKVDDARH 390

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +  +++ISW++LI GY    +  EA+++F ++    +  +     +++   +   L
Sbjct: 391 VFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGL 450

Query: 333 VEQGKQIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WT 387
            E+G +I     +     P  +  +    ++++  + GL+DEA  L  + P +     W 
Sbjct: 451 FERGWEIFQSMTRDHKVKPRAMHFAC---MIELLGREGLLDEAYALIRKAPFQPTANMWA 507

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA-YLAVLSACSHSGLVEESQEYFSRL 444
            ++     HG     +G F    L  +EP+ ++ Y+ +L+  + SG ++E+ + F  L
Sbjct: 508 ALLRACRVHG--NLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTL 563



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 122/206 (59%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLH   +K G   D+ ++  LIDMY+KCG +  A  VFD+M ++ +V W +++ G+  
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G ++  L L+ +M  S VK + FT S  I+    L+SV    Q+H   +++GF  + V 
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVA 371

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             +++D YSK G++++A  +FD M  +++I+WNA+IAGY   G+ ++ + +F KM   G 
Sbjct: 372 NTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGM 431

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQI 236
           +P+  TF + L AC   G    G +I
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEI 457



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 13/218 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+  +FS++         +R CS+   +    Q+H +LV+ GF  D++ N  L+D Y+K 
Sbjct: 332 MDHFTFSII---------IRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKW 382

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G+++ A  VFD+M  RN++SW AL+ G+  +G+ +  + +F +M    + PN  T    +
Sbjct: 383 GKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVL 442

Query: 121 KASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A  +    E G +I   M      +   +    +I++  + G ++EA  +    P +  
Sbjct: 443 SACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPT 502

Query: 180 IT-WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFT 216
              W A++    + G  + G     K+  +G  P++ +
Sbjct: 503 ANMWAALLRACRVHGNLELGKFAAEKL--YGMEPEKLS 538


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/569 (36%), Positives = 331/569 (58%), Gaps = 10/569 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G+Q+HG  +K GFE  P+V + +I+ YSK    + + ++FD  P KS  TW+++I+
Sbjct: 22  SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L  FR+M  HG +PD+ T  +  K+  +L S+     +H   + +   +
Sbjct: 82  SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHH 141

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            V   +  SLVD Y KCG +  AR+VFD +  K+V+SWS +I GY+Q     EA+ LF++
Sbjct: 142 DV--FVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKR 199

Query: 308 LRERS--LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             E+   ++V+ F LSS++ V +   L E GKQ+H    K        V++S++ +Y KC
Sbjct: 200 ALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKC 259

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G+++   ++F E+ V+N+  W  ++    +H        LF +M    V+P+ + +L +L
Sbjct: 260 GVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLL 319

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSH+GLVE+ +  F  L  +  ++P  +HY+ +VD LGRAG+L+EA  +I+ MP++P+
Sbjct: 320 YACSHAGLVEKGEHCFG-LMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPT 378

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
            ++W  LL+ CR+HG+ EL   V + +  +   +    V++SN +A AG W E  R RK+
Sbjct: 379 ESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKM 438

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
            R +G+KK  G SWVE    +H F  GD +H  T +I++ L E+ + M +  G+V    +
Sbjct: 439 MRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKA-GYVADTSF 497

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
            L ++  + K +++R HSE+LAI   L+       P   IRV KNLRVCGDCH  IK +S
Sbjct: 498 VLKEVDGDEKSQTIRYHSERLAIAFGLI----TFPPEWPIRVMKNLRVCGDCHTAIKFIS 553

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K    V +VRD  RFHRFE G C+CGDYW
Sbjct: 554 KCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 200/375 (53%), Gaps = 9/375 (2%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G+QLHG ++K+GF    ++ + LI+ Y+K    + +  +FD    ++  +W++++  
Sbjct: 23  LRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISS 82

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           F QN      L  F +M    + P++ TL T  K+   LSS+   + +H + +K+    +
Sbjct: 83  FAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHD 142

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-- 205
             VG+S++D Y+KCG +N A ++FD MP K++++W+ MI GY   G  ++ L LF++   
Sbjct: 143 VFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALE 202

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           Q++    ++FT +S L+ C +      G Q+HG    + F  S    +A SL+  Y KCG
Sbjct: 203 QDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSC--FVASSLISLYSKCG 260

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            +    +VF+ ++ +++  W+++++  AQ  +     ELF ++    ++ +      ++ 
Sbjct: 261 VVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLY 320

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNV 383
             +   LVE+G+  H +      G++    +  ++VD+  + G ++EA  +  EMP++  
Sbjct: 321 ACSHAGLVEKGE--HCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPT 378

Query: 384 VT-WTVIITGYGKHG 397
            + W  ++TG   HG
Sbjct: 379 ESVWGALLTGCRIHG 393



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 1/198 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  LR CS + L + G Q+HG   K  F     + + LI +Y+KCG + G   VF+++ 
Sbjct: 214 LSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVK 273

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN+  W A++    Q+ +      LF +M    VKPN  T    + A      VE G  
Sbjct: 274 VRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEH 333

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVLAG 193
             G+  + G E       +++D+  + G++ EA  +   MP +   + W A++ G  + G
Sbjct: 334 CFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHG 393

Query: 194 YSDKGLLLFRKMQEHGEI 211
            ++    +  K+ E G +
Sbjct: 394 NTELASFVADKVFEMGAV 411


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/517 (38%), Positives = 308/517 (59%), Gaps = 11/517 (2%)

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
           ++WN++I G V  G+ +  L  F+KM+      DE+T  S L +  S+  +     +H  
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
           +I +GF      ++  +L+D Y K G L  A  VF  +  K V+SW+SL+ GY+   +  
Sbjct: 67  IIKTGF--EAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NS 357
           EA++LF ++R   +  D   ++S++   A+  +++ G+QIHA   K  SGL++S+S  NS
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVK--SGLESSLSVDNS 182

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           +V MY KCG I +A   F+ MP ++V++WT +I GY ++G  K ++  + +M+    +PD
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPD 242

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            + ++ +L ACSH+GL+   + YF  +     +KP  EHY+C++D LGR+G+L EAK L+
Sbjct: 243 YITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLL 302

Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
             M V P   +W+ LL+ACRVH +LELG    + L  L+  N + YVM+SN+++ AG W 
Sbjct: 303 NQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWE 362

Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
           +  R+R+L RS+G+ K  G SW+E + ++  F   D  HPL  +I+  + E+   +KE  
Sbjct: 363 DAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEA- 421

Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
           G+V  + +ALHD  +E KE  L  HSEKLA+   L    L    G  IR+FKNLRVCGDC
Sbjct: 422 GYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGL----LTVPQGAPIRIFKNLRVCGDC 477

Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           H  +K  SK+     ++RD+  FH F  G CSCGDYW
Sbjct: 478 HTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 169/321 (52%), Gaps = 6/321 (1%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW +L+ G ++ G  +  LS F +M S  +K +E+TL + + +   +  ++N + +H +
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K+GFE   +V N++IDMY+K G+++ A  +F  M  K +++W +++ GY   G  ++ 
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF KM+  G  PD+    S L AC  L  +  G QIH  L+ SG   S+   +  SLV
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLS--VDNSLV 184

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
             Y KCG +V+A R FD +  + VISW++LI+GYAQ      +++ + Q+     + D  
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   +   L+  G+       KV  G+     +   ++D+  + G + EA  L N
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKV-YGIKPGPEHYACMIDLLGRSGKLAEAKGLLN 303

Query: 377 EMPV-KNVVTWTVIITGYGKH 396
           +M V  + V W  ++     H
Sbjct: 304 QMVVAPDAVVWKALLAACRVH 324



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 6/266 (2%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           ++   + +H  ++K GF    ++NN LIDMYAK G+++ A  VF KM++++VVSWT+L+ 
Sbjct: 56  VMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVT 115

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  NG+ +  + LFC+M  S V P++  +++ + A   L+ ++ G QIH   +KSG E 
Sbjct: 116 GYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLES 175

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           +  V NS++ MY+KCG I +A R FD MP + +I+W A+I GY   G     L  + +M 
Sbjct: 176 SLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMI 235

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKC 264
             G  PD  TF   L AC   G +G G     +       Y +K        ++D   + 
Sbjct: 236 ATGTKPDYITFIGLLFACSHNGLLGSG---RAYFEAMDKVYGIKPGPEHYACMIDLLGRS 292

Query: 265 GCLVEARRVFD-LIEQKSVISWSSLI 289
           G L EA+ + + ++     + W +L+
Sbjct: 293 GKLAEAKGLLNQMVVAPDAVVWKALL 318



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C++  ++D+G Q+H  LVK G    L ++N L+ MYAKCG +  A   FD M 
Sbjct: 145 VASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMP 204

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVEN 131
            R+V+SWTAL+ G+ QNG  K  L  + QM ++  KP+  T    + A   +G+L S   
Sbjct: 205 TRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGS--G 262

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM-PAKSLITWNAMIAG 188
                 M    G +  P     +ID+  + G++ EA  + + M  A   + W A++A 
Sbjct: 263 RAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/584 (35%), Positives = 336/584 (57%), Gaps = 16/584 (2%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +S  I A    SS+     +H   +KS    +  +G+ ++  Y + G   +A  +FD +P
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP 100

Query: 176 AKSLITWNAMIAGYVLAGYSDKGL---LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
            K L++WN++I+G+  +  +D G+   LLFR   E G  P+E T    + AC  +G +  
Sbjct: 101 DKDLVSWNSLISGF--SRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  IHG  + SG    VK V   SL++ Y KCGCL  A  +F+ +  +S++SW+S++  +
Sbjct: 159 GKCIHGIAVKSGMLLEVKVV--NSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVH 216

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD- 351
                  + +  F  +R   +  D   + S++    +  + +  + +H Y   +  GLD 
Sbjct: 217 VHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYI--LNGGLDG 274

Query: 352 -TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
             +++ +++D+Y K G + ++ ++F  M   + V WT +++ Y  HG  +EA+  F  M+
Sbjct: 275 NLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMV 334

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
            + V PD V +  +LSACSHSGLVEE + YF  +     ++ R+EHYSC+VD LGR+G L
Sbjct: 335 REGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHL 394

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
           ++A  LI+SMP++P+  +W  L+ ACRV G++ELG+EV E L  LD  +  NY+ +SN++
Sbjct: 395 NDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMY 454

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           + AG W +  ++R L + + L +  G S++E   +IH F  GD +HP TE+I+  L E+ 
Sbjct: 455 SAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELV 514

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
           ++   E+GF    +Y LHD+ EE KE+ +  HSEKLAI   L    L    G  + + KN
Sbjct: 515 RK-NREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGL----LVTNAGMPLIITKN 569

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +R+CGDCH F K +S I K   ++RD  RFH F  G+CSCGDYW
Sbjct: 570 IRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 12/293 (4%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           LD G  +HG  VK G   ++ + N LI++Y KCG +  AC +F+ M  +++VSW +++  
Sbjct: 156 LDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAV 215

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            +  G A+  +  F  M  + +  ++ T+ + + A   L   +    +HG  +  G + N
Sbjct: 216 HVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGN 275

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             +  +++D+Y+K G ++++ ++F  M     + W AM++ Y + G   + +  F  M  
Sbjct: 276 LAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVR 335

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCG 265
            G +PD  TFT  L AC   G V  G     F I   F Y V+  +     +VD   + G
Sbjct: 336 EGVVPDHVTFTHLLSACSHSGLVEEGKNY--FKIMYEF-YGVELRVEHYSCMVDLLGRSG 392

Query: 266 CLVEARRVFD--LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            L +A ++     +E  S + W +LI       N+    EL +++ ER   +D
Sbjct: 393 HLNDAYKLIKSMPMEPNSGV-WGALIGACRVRGNI----ELGKEVAERLFSLD 440



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 117/239 (48%), Gaps = 16/239 (6%)

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
            VD  V S+++   +  + +   + +H    K  +     + + +V  Y++ G   +A E
Sbjct: 36  NVDSLV-SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALE 94

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSG 432
           LF+E+P K++V+W  +I+G+ +       +GL  +M  +  ++P+ V  + V+SAC+  G
Sbjct: 95  LFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVG 154

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
            ++  +     +     M   ++  + +++  G+ G L+ A  L E M V+ S+  W ++
Sbjct: 155 ELDVGK-CIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQ-SLVSWNSM 212

Query: 493 LSACRVHGDLELGREVGE-ILLRLDGDNPVNYVMMSNIHADAGSWNECERL--RKLARS 548
           + A  VH  L   + +G  I++R  G N     ++S + A       CE L  RKLA +
Sbjct: 213 V-AVHVHMGLA-EKGIGYFIMMRRAGINSDQATVVSLLLA-------CENLGVRKLAEA 262


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/575 (35%), Positives = 329/575 (57%), Gaps = 6/575 (1%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + L+  L  CSK   L  G+ LH A++K G   D+ ++N +++MYAKCG    A  VFD+
Sbjct: 4   ETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE 63

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M E+N+VSW+A++ G+ Q G  +  + L+ QM    + PNE+  ++ I A   LS+V  G
Sbjct: 64  MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLG 120

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            +IH   +K G+E    V NS+I MY KC + ++A  +F   P  + +++NA+I G+V  
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              ++GL  F+ M++ G IPD F F   L  C +  ++  G ++H    T          
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELH--CQTVKLNLDSTPF 238

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           I   ++  Y +   + EA + F LIE+K VISW++LI   +  ++ A+ + +F+ + E +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298

Query: 313 -LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ D F  +S +   A  A +  GKQIHA+  +     D  V N++V+MY KCG I  A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            ++F++M   N+V+W  II G+G HGL + AV LF +M    + PD V ++ +L+AC+H+
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV++ Q YF+ +     + P IEH+SC++D LGRAGRL+EA+  +   P      +  +
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVS 478

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLSA R+HGD+ +G  + + LL+L       YV++SN++A  G W+     RK  +  GL
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGL 538

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           KK  G S +EV+  +  F  GD TH   ++I  +L
Sbjct: 539 KKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGIL 573



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 12/381 (3%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV      A  +  C+    +  G ++H   +K G+     ++N LI MY KC + + A 
Sbjct: 97  LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDAL 156

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           +VF    E N VS+ AL+ GF++N   +  L  F  M    + P+ F     +   G+ +
Sbjct: 157 SVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAF---MGVLGICT 213

Query: 128 SVEN---GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           + EN   G ++H   +K   +  P +GN II MYS+   I EA + F ++  K +I+WN 
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +IA         KGL +F+ M E   + PD+FTFTS L AC  L S+  G QIH  L+ +
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
                +   +  +LV+ Y KCGC+  A  +F  +   +++SW+++I G+        A+E
Sbjct: 334 RLYQDLG--VGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDM 361
           LF Q+    ++ D      ++       LV++G Q++  + +   G+   + +   ++DM
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHFSCLIDM 450

Query: 362 YLKCGLIDEATELFNEMPVKN 382
             + G ++EA E   + P  N
Sbjct: 451 LGRAGRLNEAEEYMRKFPFWN 471


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/575 (35%), Positives = 329/575 (57%), Gaps = 6/575 (1%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           + L+  L  CSK   L  G+ LH A++K G   D+ ++N +++MYAKCG    A  VFD+
Sbjct: 4   ETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDE 63

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           M E+N+VSW+A++ G+ Q G  +  + L+ QM    + PNE+  ++ I A   LS+V  G
Sbjct: 64  MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLG 120

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
            +IH   +K G+E    V NS+I MY KC + ++A  +F   P  + +++NA+I G+V  
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVEN 180

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              ++GL  F+ M++ G IPD F F   L  C +  ++  G ++H    T          
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELH--CQTVKLNLDSTPF 238

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           I   ++  Y +   + EA + F LIE+K VISW++LI   +  ++ A+ + +F+ + E +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298

Query: 313 -LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            ++ D F  +S +   A  A +  GKQIHA+  +     D  V N++V+MY KCG I  A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
            ++F++M   N+V+W  II G+G HGL + AV LF +M    + PD V ++ +L+AC+H+
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHA 418

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLV++ Q YF+ +     + P IEH+SC++D LGRAGRL+EA+  +   P      +  +
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVS 478

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LLSA R+HGD+ +G  + + LL+L       YV++SN++A  G W+     RK  +  GL
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGL 538

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           KK  G S +EV+  +  F  GD TH   ++I  +L
Sbjct: 539 KKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGIL 573



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 188/381 (49%), Gaps = 12/381 (3%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV      A  +  C+    +  G ++H   +K G+     ++N LI MY KC + + A 
Sbjct: 97  LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDAL 156

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           +VF    E N VS+ AL+ GF++N   +  L  F  M    + P+ F     +   G+ +
Sbjct: 157 SVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAF---MGVLGICT 213

Query: 128 SVEN---GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           + EN   G ++H   +K   +  P +GN II MYS+   I EA + F ++  K +I+WN 
Sbjct: 214 TTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
           +IA         KGL +F+ M E   + PD+FTFTS L AC  L S+  G QIH  L+ +
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
                +   +  +LV+ Y KCGC+  A  +F  +   +++SW+++I G+        A+E
Sbjct: 334 RLYQDLG--VGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVE 391

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDM 361
           LF Q+    ++ D      ++       LV++G Q++  + +   G+   + +   ++DM
Sbjct: 392 LFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHFSCLIDM 450

Query: 362 YLKCGLIDEATELFNEMPVKN 382
             + G ++EA E   + P  N
Sbjct: 451 LGRAGRLNEAEEYMRKFPFWN 471


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/570 (36%), Positives = 327/570 (57%), Gaps = 11/570 (1%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S+  G+Q+H   +K G +  P++ + +I+ YSK      + ++F   P KS  TW+++I+
Sbjct: 35  SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
            +         L  FR M   G  PD+  F S  K+CG L S+     +H F + +   Y
Sbjct: 95  SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTA--Y 152

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +   +  S++D Y KCG +  A  VFD +  ++V+SWS LI GY Q     E++ LF++
Sbjct: 153 HLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKR 212

Query: 308 --LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             + E +  V+ F LSS++ V     L++ G+ IH  + K        V++S++ +Y KC
Sbjct: 213 FLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKC 272

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAV 424
           G+++EA ++F E+ V+N+  W  ++    +H    +   LF KM  +  ++ + + +L V
Sbjct: 273 GVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCV 332

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           L ACSH+GLVE+ + YF  L  D  ++P  +HYS +VD LGRAG+L++A  LIE MP++P
Sbjct: 333 LYACSHAGLVEKGKYYF-ELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEP 391

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
           + ++W  LL+ CR+HG+ +L   V + +  L   +   +VM+SN +A AG W E  + RK
Sbjct: 392 TESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARK 451

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           + R +G+KK  G SWVE    IH F  GD +H  + +I+  L E+ + M ++ G+V    
Sbjct: 452 MMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEM-DKAGYVADTS 510

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
           + L ++  E K  S+R HSE+LAI      G +    G+ IRV KNLRVCGDCH  IK +
Sbjct: 511 FVLKEVDGEEKSRSIRYHSERLAIAF----GFITFPHGQPIRVMKNLRVCGDCHTAIKFI 566

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK    V +VRD  RFHRFE G C+CGDYW
Sbjct: 567 SKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 208/402 (51%), Gaps = 6/402 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF+     + L ++L   + +  L  G+QLH  ++K+G     +L++ LI+ Y+K     
Sbjct: 13  SFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPY 72

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            +  +F     ++  +W++++  F QN      L+ F  M    V P++    +  K+ G
Sbjct: 73  SSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCG 132

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
           +LSS+     +H   +K+ +  +  VG+S+IDMY+KCG I  A  +FD MP +++++W+ 
Sbjct: 133 ILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSG 192

Query: 185 MIAGYVLAGYSDKGLLLFRK--MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           +I GYV  G  D+ L LF++  ++E  E  ++FT +S L+ CG    +  G  IHG    
Sbjct: 193 LIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFK 252

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
           + F  S    +A SL+  Y KCG + EA  VF+ +  +++  W+++++  AQ  +  +  
Sbjct: 253 TSFDSSC--FVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTF 310

Query: 303 ELFRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           ELF +++    ++ +      ++   +   LVE+GK              T   +++VD+
Sbjct: 311 ELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDL 370

Query: 362 YLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEA 402
             + G +++A +L  EMP++   + W  ++TG   HG  K A
Sbjct: 371 LGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLA 412


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/549 (36%), Positives = 314/549 (57%), Gaps = 12/549 (2%)

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           WN ++G      Y K G +  A ++FD MPA+++ TWNAM+AG   +G +++ L  F  M
Sbjct: 3   WNILIGG-----YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 57

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +  G  PDE+   S  + C  L  V  G Q+H +++ SG    +   +  SL   Y++CG
Sbjct: 58  RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDM--CVGSSLAHMYMRCG 115

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +       +   +++S ++ I G  Q  +   A+E F  +R   ++ +     S + 
Sbjct: 116 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 175

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +D A + QG+QIHA A K        V  S+V MY +CG + ++  +  E    ++V 
Sbjct: 176 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 235

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            + +I+ YG HG  ++AVGLF++M+    EP+ V +L +L ACSHSGL +E    F  + 
Sbjct: 236 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 295

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               ++P ++HY+CIVD LGR+G L+EA++LI SMPV+P   IW+TLLSAC+     ++ 
Sbjct: 296 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 355

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             + E ++ LD  +  +YV++SNI A +  W +  ++R+  R + ++K  G SWVE+  +
Sbjct: 356 ERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQ 415

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F  GD++H    +I + L EM  R++ + G+   +    HD+++E KE SL  HSEK
Sbjct: 416 IHQFCTGDESHSRQREIVECLEEMMTRIR-QCGYAPDMSMVFHDMEDEEKEVSLAHHSEK 474

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI  A     L+   G  IRV KNLRVC DCH  IK +SK++    VVRD +RFH F+ 
Sbjct: 475 LAIAFAF----LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKD 530

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 531 GKCSCGDYW 539



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N LI  Y K G++  A  +FD+M  RNV +W A++ G   +G  +  L  F  M    ++
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P+E+ L +  +    L  V +G Q+H   ++SG + +  VG+S+  MY +CG + +    
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
              +P+ ++++ N  I+G    G ++  L  F  M+  G   +  TF S + +C  L ++
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G QIH   I +G    V  +   SLV  Y +CGCL ++ RV        ++  S++I 
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMT--SLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 241

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
            Y    +  +A+ LF+Q+     + +     +++   +   L ++G        K   GL
Sbjct: 242 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKT-YGL 300

Query: 351 DTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG 392
             SV +   IVD+  + G ++EA +L   MPV+ + V W  +++ 
Sbjct: 301 QPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 8/304 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L    RCC+    +  G Q+H  +V+ G   D+ + + L  MY +CG +    A    + 
Sbjct: 69  LGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALP 128

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             N+VS    + G  QNG+A+  L  FC M  + V+ N  T  + + +   L+++  G Q
Sbjct: 129 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQ 188

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+G +    V  S++ MYS+CG + ++ R+        L+  +AMI+ Y   G+
Sbjct: 189 IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGH 248

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
             K + LF++M   G  P+E TF + L AC   G    G      +  T G   SVK   
Sbjct: 249 GQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYT 308

Query: 254 AGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +VD   + GCL EA   +  +  Q   + W +L+     ++      ++  ++ ER 
Sbjct: 309 C--IVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKF----DMAERIAERV 362

Query: 313 LQVD 316
           +++D
Sbjct: 363 IELD 366



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 130/326 (39%), Gaps = 66/326 (20%)

Query: 283 ISWSSLILGYAQEENLAEAMELFRQ-------------------------------LRER 311
           +SW+ LI GY +  +L  A +LF +                               +R  
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            +Q D + L S+    A    V  G+Q+HAY  +     D  V +S+  MY++CG + + 
Sbjct: 61  GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
                 +P  N+V+    I+G  ++G A+ A+  F  M    VE + V +++ +++CS  
Sbjct: 121 EAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDL 180

Query: 432 GLVEESQEYFS---RLCNDK---RMKPRIEHYS---CIVDS------------------- 463
             + + Q+  +   +   DK    M   +  YS   C+ DS                   
Sbjct: 181 AALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMI 240

Query: 464 --LGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD 518
              G  G   +A  L + M     +P+   + TLL AC   G  + G    E++ +  G 
Sbjct: 241 SAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGL 300

Query: 519 NPV--NYVMMSNIHADAGSWNECERL 542
            P   +Y  + ++   +G  NE E L
Sbjct: 301 QPSVKHYTCIVDLLGRSGCLNEAEDL 326


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/695 (33%), Positives = 363/695 (52%), Gaps = 80/695 (11%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G   H  ++K+G   D  + N ++DMYAK G+++ A  +F++M ER +  W +++ G  +
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +GN    + LF  M +                                        N + 
Sbjct: 174 SGNETEAVVLFNMMPAR---------------------------------------NIIT 194

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S++  Y+K G +  A R FD MP +S+++WNAM + Y       + L LF +M E G 
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQI-----------HGFLITSGFPYSVK--------- 250
            PD+ T+  T+ +C S+G       I           + F+ T+      K         
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314

Query: 251 ----------TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
                      V    ++  Y + G L  AR +FD + ++ V+SW+S+I GYAQ    A 
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374

Query: 301 AMELFRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           ++ELF+++     +Q D   ++S++        ++    +     +    L  S  NS++
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLI 434

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
            MY KCG + +A  +F  M  ++VV++  +I+G+  +G  KEA+ L   M  + +EPD V
Sbjct: 435 FMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHV 494

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            Y+ VL+ACSH+GL+ E +  F  +       P ++HY+C+VD LGRAG LDEAK LI+S
Sbjct: 495 TYIGVLTACSHAGLLNEGKNVFKSI-----QAPTVDHYACMVDLLGRAGELDEAKMLIQS 549

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP+KP   ++ +LL+A R+H  + LG      L  L+  N  NYV++SNI+A  G W + 
Sbjct: 550 MPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDV 609

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
           +R+R++ +  GLKK  G SWVE   ++H F  GD +H  ++ I+++L E+E++MK  +GF
Sbjct: 610 KRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK-RVGF 668

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V     AL D++EE KEE L  HSEKLAI  AL    L  + G  IRV KNLR+C DCH 
Sbjct: 669 VADKSCALRDVEEEEKEEMLGTHSEKLAICFAL----LISEVGTTIRVVKNLRICLDCHT 724

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            IK +SK+     VVRD  RFH F  G+CSC DYW
Sbjct: 725 AIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 68/294 (23%)

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           +S ++  Y++     + + LF+     +L+   FV   ++ +       + G   HAY  
Sbjct: 68  YSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNMFHAYVL 122

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLID-------------------------------EATE 373
           K+    D  + N+I+DMY K G +D                               EA  
Sbjct: 123 KLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVV 182

Query: 374 LFNEMPVKNVVTWTVIITGYGKHG-------------------------------LAKEA 402
           LFN MP +N++TWT ++TGY K G                                 KEA
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF +ML + + PD   ++  +S+CS  G    +     R+ + K +       + ++D
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSIL-RMIDQKHIVLNSFVKTALLD 301

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
              + G L+ A+N+ + +  + +   W  ++SA    G L L RE+ + + + D
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD 355


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/666 (33%), Positives = 356/666 (53%), Gaps = 49/666 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  ++K+G   D  +   L+   A      ++ AC +F      +V     L+ G  +
Sbjct: 23  QIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLIRGLYE 82

Query: 91  NGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +   +  L  F +M  +S   P+ F+ +  +KA+  L SV  G+Q+H   +  G + +  
Sbjct: 83  SDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLF 142

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG ++I MY +CG +  A ++FD MP  + I WNAM+                       
Sbjct: 143 VGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT---------------------- 180

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
                        AC   G + GG ++   +       S   ++AG     Y K G L  
Sbjct: 181 -------------ACCRGGDMKGGRELFDLMPVRNL-MSWNVMLAG-----YTKAGELEL 221

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR +F  +  K  +SWS++I+G+A      EA   FR+L+ + ++ +   L+ ++   A 
Sbjct: 222 AREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQ 281

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE-MPVKNVVTWTV 388
              +E GK +H +  K       SV+N+++D Y KCG +  A  +F   M  +N+V+WT 
Sbjct: 282 AGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTS 341

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++     HG  +EA+G+F KM    + PD +A++++L ACSH+GLVE+  EYF ++    
Sbjct: 342 MMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMY 401

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P IEHY C+VD  GRAG+L +A   +  MP+  +  IW+TLL AC +HGD++L  +V
Sbjct: 402 NIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQV 461

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L  LD +N  ++V++SN +A AG W +   +R+    + + K  G S +EVDK ++ 
Sbjct: 462 KERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYT 521

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  G   + +TE+ ++ L E+ +R++ E G+V  +   LHDI+EE KE S+ VHSEKLA+
Sbjct: 522 FLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAV 581

Query: 629 GLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVC 688
              + R       G+ IR+ KNLR+C DCH  +K +S+I K+  VVRD +RFH F+ G C
Sbjct: 582 AFGIARLC----KGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYC 637

Query: 689 SCGDYW 694
           SC DYW
Sbjct: 638 SCRDYW 643



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 190/402 (47%), Gaps = 52/402 (12%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+QLH   +  G    L +   LI MY +CG +  A  VFD+M E N ++W A++    +
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            G+ K    LF  M      P    +S N+  +G                          
Sbjct: 185 GGDMKGGRELFDLM------PVRNLMSWNVMLAG-------------------------- 212

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
                  Y+K G +  A  MF  MP K  ++W+ MI G+   GY ++    FR++Q  G 
Sbjct: 213 -------YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGM 265

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+E + T  L AC   G++  G  +HGF+  SG  + V   +  +L+D Y KCG ++ A
Sbjct: 266 RPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVS--VNNALLDTYSKCGNVLMA 323

Query: 271 RRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + VF+ ++ +++++SW+S++   A   +  EA+ +F ++ E  ++ D     S++   + 
Sbjct: 324 QLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSH 383

Query: 330 FALVEQGKQIHAYAAKVPS--GLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
             LVEQG +   Y  K+     ++ S+ +   +VD+Y + G + +A E   +MP+    +
Sbjct: 384 AGLVEQGCE---YFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAI 440

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            W  ++     HG  K A  +  K  L +++P+  +   +LS
Sbjct: 441 IWRTLLGACSMHGDVKLAEQV--KERLSELDPNNSSDHVLLS 480



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 14/202 (6%)

Query: 5   SFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLID 55
           +FS   E QR         L   L  C++   L++G  LHG + K G ++ + +NN L+D
Sbjct: 253 AFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLD 312

Query: 56  MYAKCGEMNGACAVFDKML-ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEF 114
            Y+KCG +  A  VF++++ ERN+VSWT++M     +G+ +  + +F +M  S ++P+E 
Sbjct: 313 TYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEI 372

Query: 115 TLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFD 172
              + + A      VE G +     MK  +   P + +   ++D+Y + G++ +A     
Sbjct: 373 AFISLLYACSHAGLVEQGCEYFDK-MKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVC 431

Query: 173 VMPAK-SLITWNAMIAGYVLAG 193
            MP   + I W  ++    + G
Sbjct: 432 QMPIPCTAIIWRTLLGACSMHG 453



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 30/299 (10%)

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG-----CLVEARRV 273
           S L  C SL +     QIH  ++  G        IAG L+     C       L  A R+
Sbjct: 10  SLLNICKSLTTF---KQIHANVLKLGL--ESDPFIAGKLLH---HCAISLSDSLDYACRL 61

Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFVLSSMMGVFADFAL 332
           F       V   ++LI G  + +   +++  F ++R  S    D F  + ++   A+   
Sbjct: 62  FRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRS 121

Query: 333 VEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           V  G Q+H  A  +  GLDT   V  +++ MY +CG +  A ++F+EMP  N + W  ++
Sbjct: 122 VRVGIQLHCQA--LVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMV 179

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T   + G  K    LF  M + ++    +++  +L+  + +G +E ++E F  +     M
Sbjct: 180 TACCRGGDMKGGRELFDLMPVRNL----MSWNVMLAGYTKAGELELAREMFLEM----PM 231

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGR 506
           K  +  +S ++      G  +EA +    +    ++P+      +LSAC   G LE G+
Sbjct: 232 KDDVS-WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGK 289


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 217/674 (32%), Positives = 349/674 (51%), Gaps = 75/674 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++K+GF  D+ + N LI+ ++ C  M  AC VF++    + VSW +++ G+++ G
Sbjct: 99  QVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG 158

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
           N +    ++ QM   S+                                       +  N
Sbjct: 159 NVEEAKHIYHQMPERSI---------------------------------------IASN 179

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           S+I ++   G + EA ++FD M  K ++TW+A+IA +      ++ +  F  M + G + 
Sbjct: 180 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV 239

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF--------------------------- 245
           DE    S L AC +L  V  G  IH   +  G                            
Sbjct: 240 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 299

Query: 246 --PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
              Y +  +   S++  Y+KC  +  A+ +FD + +K V+SWSS+I GYAQ +   E + 
Sbjct: 300 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 359

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF++++    + D   L S++   A  A +EQGK +HAY  +    ++  +  +++DMY+
Sbjct: 360 LFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYM 419

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KCG ++ A E+F  M  K + TW  +I G   +GL + ++ +F  M    V P+ + ++ 
Sbjct: 420 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 479

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VL AC H GLV+E Q +F  + +D +++P ++HY C+VD LGRAG+L EA+ L+  MP+ 
Sbjct: 480 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 539

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P +A W  LL AC+ HGD E+GR VG  L+ L  D+   +V++SNI+A  G W++   +R
Sbjct: 540 PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIR 599

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
            +     + K+ G S +E +  IH F  GD THP  + I  +L+EM  ++K E G+   +
Sbjct: 600 GMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLE-GYTPDI 658

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
              L D+ EE KE +L  HSEKLAI   L+    N  P   IR+ KNLR+C DCH   K 
Sbjct: 659 NEVLLDVDEEEKESTLFRHSEKLAIAFGLI----NISPPTPIRIMKNLRICNDCHTAAKL 714

Query: 664 LSKIL--KLVFVVR 675
           +SK    K+VF+ R
Sbjct: 715 ISKAFCRKIVFLFR 728



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/467 (22%), Positives = 211/467 (45%), Gaps = 76/467 (16%)

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +F+ +   N   W  ++  ++Q  +     +L+  M S+ +  + +T    I+A  +  S
Sbjct: 34  IFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRS 93

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
                Q+H   +K GF+ +  V N++I+ +S C  + +A R+F+       ++WN+++AG
Sbjct: 94  EWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAG 153

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           Y+  G  ++   ++ +M E                                         
Sbjct: 154 YIEIGNVEEAKHIYHQMPE----------------------------------------- 172

Query: 249 VKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
            +++IA  S++  +   G +VEA ++FD + +K +++WS+LI  + Q E   EA+  F  
Sbjct: 173 -RSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 231

Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG------------------ 349
           + +  + VD  V  S +   A+  +V  GK IH+ + K+ +                   
Sbjct: 232 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 291

Query: 350 -------------LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
                        LD    NS++  YLKC L+D A  +F+ MP K+VV+W+ +I+GY ++
Sbjct: 292 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 351

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
            L  E + LF++M +   +PD    ++V+SAC+    +E+ + +         +   +  
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGK-WVHAYIKRNGLTINVIL 410

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
            + ++D   + G ++ A  +   M ++  I+ W  L+    ++G +E
Sbjct: 411 GTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 456



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 33/333 (9%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM-------------- 63
           +L  C+  L+++ G  +H   +K+G    + L N LI MY+KCG++              
Sbjct: 247 ALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLD 306

Query: 64  -----------------NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS 106
                            + A A+FD M E++VVSW++++ G+ QN      L+LF +M  
Sbjct: 307 LISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQM 366

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           S  KP+E TL + I A   L+++E G  +H    ++G   N ++G ++IDMY KCG +  
Sbjct: 367 SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVET 426

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  M  K + TWNA+I G  + G  +  L +F  M++    P+E TF   L AC  
Sbjct: 427 ALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRH 486

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISW 285
           +G V  G Q H + +             G +VD   + G L EA  + + +     V +W
Sbjct: 487 MGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 545

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
            +L+    +  +      + R+L E     DGF
Sbjct: 546 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGF 578



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 4/208 (1%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +   L   +  C++   L+ G  +H  + + G + +++L   LIDMY KCG +  A  VF
Sbjct: 372 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 431

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
             M+E+ + +W AL+ G   NG  ++ L +F  M    V PNE T    + A   +  V+
Sbjct: 432 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 491

Query: 131 NGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIA 187
            G Q H   M    +  P V +   ++D+  + G++ EA  + + MP    + TW A++ 
Sbjct: 492 EG-QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 550

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
                G S+ G  + RK+ E     D F
Sbjct: 551 ACKKHGDSEMGRRVGRKLIELQPDHDGF 578


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/558 (36%), Positives = 327/558 (58%), Gaps = 14/558 (2%)

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           + +GFE++  + N ++ M+ KCG + +A R+FD MP ++L++WN +I+G V  G   +  
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            LF  M E       FTF   ++A   L  +  G Q+H   +  G    +   ++ +L+D
Sbjct: 62  RLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDI--FVSCALID 119

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG + +AR VF+ + +K+ + W+++I GYA      EA++++ ++R+  +++D F 
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFT 179

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            S ++ + A  A VE  KQ HA   +   G D   + ++VD Y K G I++A  +F++M 
Sbjct: 180 FSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA 239

Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            KNV++W  +I GYG HG   EAV LF +M+ + + P+ + +LAVLSACSHSGL E   E
Sbjct: 240 SKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWE 299

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
            F  +  D R+KPR  HY+C+++ +GR G LDEA  LI   P KP+  +W  LL+ACRV+
Sbjct: 300 IFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVN 359

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            + ELG+   E L  ++ D   NY+++ NI+  AG+  E   +    + KGL+     SW
Sbjct: 360 ENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSW 419

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--ELGFVYGVKYALHDIQEESKEE 617
           +EV +  H F  GD+ HP  ++I+Q   +++K M E  + G+V   K  L D+ E+  EE
Sbjct: 420 IEVKRRPHVFLSGDNRHPQRKEIYQ---KVDKLMLEISKYGYVPNQKTLLPDVDEQ--EE 474

Query: 618 SLRV-HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
            +R+ HSEKLAI   L+    +      +++ +  R+CGDCHE IK ++++     V+RD
Sbjct: 475 RVRLYHSEKLAIAFGLI----STPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRD 530

Query: 677 ATRFHRFEGGVCSCGDYW 694
           A RFH F+ G CSC DYW
Sbjct: 531 AGRFHHFKHGHCSCEDYW 548



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 217/422 (51%), Gaps = 14/422 (3%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           ++  GF FD  + N ++ M+ KCG M  A  +FD+M ERN+VSW  ++ G +  G+    
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
             LF  M         FT +  I+AS  L  +  G Q+H   +K G   +  V  ++IDM
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           YSKCG I +A  +F+ MP K+ + WN +IAGY L GYS++ L ++ +M++ G   D FTF
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
           +  ++ C  L SV    Q H  LI  GF   +  V   +LVDFY K G + +AR VFD +
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDI--VANTALVDFYSKWGRIEDARHVFDKM 238

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             K+VISW++LI GY      +EA+ELF Q+ +  +  +     +++   +   L E+G 
Sbjct: 239 ASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGW 298

Query: 338 QIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG 392
           +I     +     P  +  +    ++++  + GL+DEA  L    P K     W  ++T 
Sbjct: 299 EIFQSMGRDNRIKPRAMHYAC---MIELMGREGLLDEALALIRGAPFKPTANMWAALLTA 355

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGV-AYLAVLSACSHSGLVEESQEYFSRLCNDK-RM 450
              +      +G F    L  +EPD +  Y+ +L+  + +G ++E+ +    L     RM
Sbjct: 356 CRVN--ENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRM 413

Query: 451 KP 452
           +P
Sbjct: 414 RP 415



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 119/210 (56%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+  G QLH   +KMG   D+ ++  LIDMY+KCG +  A  VF++M E+  V W  ++ 
Sbjct: 91  LISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIA 150

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+  +G ++  L ++ +M  S VK + FT S  ++    L+SVE+  Q H   ++ GF  
Sbjct: 151 GYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGS 210

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           + V   +++D YSK GRI +A  +FD M +K++I+WNA+I GY   G   + + LF +M 
Sbjct: 211 DIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMI 270

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +    P+  TF + L AC   G    G +I
Sbjct: 271 QERMNPNHITFLAVLSACSHSGLSERGWEI 300



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           M+  +FS++         +R C++   +++  Q H AL++ GF  D++ N  L+D Y+K 
Sbjct: 175 MDHFTFSMI---------VRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKW 225

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VFDKM  +NV+SW AL+ G+  +G     + LF QM    + PN  T    +
Sbjct: 226 GRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVL 285

Query: 121 KASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A       E G +I   M   +  +   +    +I++  + G ++EA  +    P K  
Sbjct: 286 SACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPT 345

Query: 180 IT-WNAMIAG 188
              W A++  
Sbjct: 346 ANMWAALLTA 355


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/556 (36%), Positives = 310/556 (55%), Gaps = 50/556 (8%)

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
           ++ITWN +++G   +G +   +L   +M   G +PD    +  L A G +G V  G Q+H
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLH 179

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD------------LIE------- 278
           G+++ +G    +   +A +L+D Y KCG   E  RVFD            L+        
Sbjct: 180 GYVVKAGC--RLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237

Query: 279 ----------------QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
                           + +V+SW+S++    Q     EA++LFR+++   ++ +   +  
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++  FA+ A +  G+  H ++ +     D  V +++VDMY KCG + +A  +F  MP +N
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           VV+W  +I GY  HG A+ AV LFR M     +PD V +  VL ACS +G  EE + YF+
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            + +   + PR+EHY+C+V  LGRAG+LD+A ++I  MP +P   IW +LL +CRVHG++
Sbjct: 418 EMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
            L     E L +L+ +N  NYV++SNI+A    W+   RLR + ++ GLKK  G SW+E+
Sbjct: 478 VLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEI 537

Query: 563 DKEIHFFYGGDDTHPL----TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
             ++H    GD +HP+    TEK+  + MEM +     LGF     Y LHD++E+ K++ 
Sbjct: 538 KNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRR-----LGFAPSTDYVLHDVEEQEKDDI 592

Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
           L VHSEKLA+ L L+    +   G  ++V KNLR+CGDCHE +K +S   +    VRD  
Sbjct: 593 LSVHSEKLAVALGLI----STSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTN 648

Query: 679 RFHRFEGGVCSCGDYW 694
           RFH F+ G CSC DYW
Sbjct: 649 RFHHFKDGKCSCADYW 664



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 35/233 (15%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD------------------- 71
           G QLHG +VK G   D  +   LIDMY KCG  +    VFD                   
Sbjct: 175 GEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSR 234

Query: 72  ----------------KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
                           + +E NVVSWT+++   +QNG     + LF +M S  ++PN  T
Sbjct: 235 NAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVT 294

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +   + A   ++++ +G   H   ++ GF  +  VG++++DMY+KCGR+ +A  +F+ MP
Sbjct: 295 IPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMP 354

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +++++WNAMI GY + G ++  + LFR MQ   E PD  TFT  L AC   G
Sbjct: 355 YRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAG 407



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 45/387 (11%)

Query: 53  LIDMYAKCGEMNGACAVFDKM----LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSS 108
           LI  +A  G+  GA  + ++M    +E NV++W  L+ G  ++G A+  +    +M    
Sbjct: 92  LIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEG 151

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
             P+   +S  + A G +  V  G Q+HG  +K+G   +  V  ++IDMY KCGR +E  
Sbjct: 152 FLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIV 211

Query: 169 RMF------DVMPAKSL-----------------------------ITWNAMIAGYVLAG 193
           R+F      DV    +L                             ++W +++A  V  G
Sbjct: 212 RVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNG 271

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + + LFR+MQ  G  P+  T    L A  ++ ++  G   H F +  GF + +   +
Sbjct: 272 RDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDI--YV 329

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +LVD Y KCG + +AR +F+ +  ++V+SW+++I GYA       A+ LFR ++    
Sbjct: 330 GSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE 389

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
           + D    + ++G  +     E+G+  +    +   G+   + +   +V +  + G +D+A
Sbjct: 390 KPDLVTFTCVLGACSQAGWTEEGRS-YFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDA 448

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKHG 397
            ++ N+MP + +   W  ++     HG
Sbjct: 449 YDIINQMPFEPDGCIWGSLLGSCRVHG 475



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 136/328 (41%), Gaps = 76/328 (23%)

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
           S    +A SL+  Y++ G   +AR V D +  ++V+ WS+LI  +A   +   A  L  +
Sbjct: 52  SRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLER 111

Query: 308 LRERSLQVD------------------------------GFV-----LSSMMGVFADFAL 332
           +R   ++ +                              GF+     +S  +    D   
Sbjct: 112 MRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGD 171

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE---MPVK-------- 381
           V  G+Q+H Y  K    LD  V+ +++DMY KCG  DE   +F+E   M V         
Sbjct: 172 VAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAG 231

Query: 382 ------------------------NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
                                   NVV+WT I+    ++G   EAV LFR+M  + +EP+
Sbjct: 232 LSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPN 291

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKN 475
            V    VL A ++   +   +   S  C   R     + Y  S +VD   + GR+ +A+ 
Sbjct: 292 SVTIPCVLPAFANIAALMHGR---SAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARM 348

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLE 503
           + E+MP + ++  W  ++    +HG+ E
Sbjct: 349 IFEAMPYR-NVVSWNAMIGGYAMHGEAE 375



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L +G   H   ++ GF  D+ + + L+DMYAKCG +  A  +F+ M  RNVVSW A++ G
Sbjct: 308 LMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGG 367

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEW 146
           +  +G A+  + LF  M SS  KP+  T +  + A       E G    + M  K G   
Sbjct: 368 YAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISP 427

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                  ++ +  + G++++A  + + MP
Sbjct: 428 RMEHYACMVTLLGRAGKLDDAYDIINQMP 456


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/579 (34%), Positives = 331/579 (57%), Gaps = 8/579 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L+ G Q+H  +++ G   D  L N LID Y KCG +  A  +F+ M 
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +N++SWT L+ G+ QN   K  + LF  M    +KP+ +  S+ + +   L ++  G Q
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+    +  V NS+IDMY+KC  + +A ++FD+  A  ++ +NAMI GY   G 
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431

Query: 195 S---DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                + L +FR M+     P   TF S L+A  SL S+G   QIHG +   G    +  
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI-- 489

Query: 252 VIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             AGS L+D Y  C CL ++R VFD ++ K ++ W+S+  GY Q+    EA+ LF +L+ 
Sbjct: 490 -FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
              + D F  ++M+    + A V+ G++ H    K     +  ++N+++DMY KCG  ++
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A + F+    ++VV W  +I+ Y  HG  K+A+ +  KM+ + +EP+ + ++ VLSACSH
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVE+  + F  +     ++P  EHY C+V  LGRAGRL++A+ LIE MP KP+  +W+
Sbjct: 669 AGLVEDGLKQFELMLRFG-IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LLS C   G++EL     E+ +  D  +  ++ M+SNI+A  G W E +++R+  + +G
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEM 589
           + K  GRSW+ ++KE+H F   D +H    +I++VL ++
Sbjct: 788 VVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 277/548 (50%), Gaps = 41/548 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QL   LVK GF  D+ +   LID Y K G ++ A  VFD + E++ V+WT ++ G ++ G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   L LF Q+   +V P+ + LST + A  +L  +E G QIH   ++ G E +  + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +ID Y KCGR+  A ++F+ MP K++I+W  +++GY       + + LF  M + G  P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D +  +S L +C SL ++G GTQ+H + I +       + +  SL+D Y KC CL +AR+
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANL--GNDSYVTNSLIDMYAKCDCLTDARK 406

Query: 273 VFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           VFD+     V+ ++++I GY++   +  L EA+ +FR +R R ++       S++   A 
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +   KQIH    K    LD    ++++D+Y  C  + ++  +F+EM VK++V W  +
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
             GY +    +EA+ LF ++ L    PD   +  +++A  +   V+  QE+  +L     
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586

Query: 445 -CND-----------KRMKPRIEH-------------YSCIVDSLGRAGRLDEAKNLIES 479
            CN            K   P   H             ++ ++ S    G   +A  ++E 
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646

Query: 480 M---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAG 534
           M    ++P+   +  +LSAC   G +E G +  E++LR  G  P   +YV M ++   AG
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAG 705

Query: 535 SWNECERL 542
             N+   L
Sbjct: 706 RLNKAREL 713



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 265/512 (51%), Gaps = 20/512 (3%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R+  A  L+  + + LL Y   +HG ++  G   D  L+N LI++Y++ G M  A  VF+
Sbjct: 44  RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVE 130
           KM ERN+VSW+ ++     +G  +  L +F +   +    PNE+ LS+ I+A   L    
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163

Query: 131 NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
             M  Q+    +KSGF+ +  VG  +ID Y K G I+ A  +FD +P KS +TW  MI+G
Sbjct: 164 RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG 223

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
            V  G S   L LF ++ E   +PD +  ++ L AC  L  + GG QIH  ++  G    
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL--E 281

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +   L+D YVKCG ++ A ++F+ +  K++ISW++L+ GY Q     EAMELF  +
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  L+ D +  SS++   A    +  G Q+HAY  K   G D+ V+NS++DMY KC  +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLA---KEAVGLFRKMLLDDVEPDGVAYLAVL 425
            +A ++F+     +VV +  +I GY + G      EA+ +FR M    + P  + ++++L
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            A +    +  S++    L     +   I   S ++D       L +++ + + M VK  
Sbjct: 462 RASASLTSLGLSKQIHG-LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-D 519

Query: 486 IAIWQTLLS----------ACRVHGDLELGRE 507
           + IW ++ +          A  +  +L+L RE
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 204/420 (48%), Gaps = 12/420 (2%)

Query: 6   FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
           F L  +    +  L  C+    L +G Q+H   +K     D  + N LIDMYAKC  +  
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNA---KACLSLFCQMGSSSVKPNEFTLSTNIKA 122
           A  VFD     +VV + A++ G+ + G        L++F  M    ++P+  T  + ++A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463

Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
           S  L+S+    QIHG+  K G   +   G+++ID+YS C  + ++  +FD M  K L+ W
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
           N+M AGYV    +++ L LF ++Q   E PDEFTF + + A G+L SV  G + H  L+ 
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583

Query: 243 SGF---PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
            G    PY     I  +L+D Y KCG   +A + FD    + V+ W+S+I  YA      
Sbjct: 584 RGLECNPY-----ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           +A+++  ++    ++ +      ++   +   LVE G +      +     +T     +V
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMV 698

Query: 360 DMYLKCGLIDEATELFNEMPVKN-VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
            +  + G +++A EL  +MP K   + W  +++G  K G  + A       +L D +  G
Sbjct: 699 SLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSG 758



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           +++   RAG +  A+ + E MP +  ++ W T++SAC  HG  E    V     R   D+
Sbjct: 85  LINLYSRAGGMVYARKVFEKMPERNLVS-WSTMVSACNHHGIYEESLVVFLEFWRTRKDS 143

Query: 520 PVNYVMMSNIHADAG 534
           P  Y++ S I A +G
Sbjct: 144 PNEYILSSFIQACSG 158


>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/538 (38%), Positives = 321/538 (59%), Gaps = 10/538 (1%)

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYV-LAGYSDKGLLLFRKMQEHG-EIPDEFT 216
           S  G IN A  +F  +P  ++ +WN++I GY  +   S + + LF+K+ E G  +P+ FT
Sbjct: 35  SPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFT 94

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
               LKAC  + + G G Q+H  ++  GF  S+   +  SLV+FY KC  +  AR+VF+ 
Sbjct: 95  LAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSL--FVQTSLVNFYGKCEEIGFARKVFEE 152

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           +  +++++W+++I G+A+   + EAMELFR++++  +Q D   L S++   A    ++ G
Sbjct: 153 MPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIG 212

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
             +HAY  K     D  +S ++VDMY KCG I+ A ++F  MPVK+   W+ +I G+  H
Sbjct: 213 YWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYH 272

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           GLA++A+  F++ML  +V PD V +LAVLSAC+H GLV   + ++S L  +  ++P +EH
Sbjct: 273 GLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWS-LMLEFGIEPSVEH 331

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y C VD L R+G ++EA  +  +M + P+ A W++LL  C+    L LG  V   LL L+
Sbjct: 332 YGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELE 391

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
             N  NY+M+SN+++    W +   LRK+ + K +K V G S +EVD  +H F  GD +H
Sbjct: 392 PLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSH 451

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P  + + + + EM  R+++  G+   +   LH + +E KE +L  HSE+ AI   L    
Sbjct: 452 PEVKMLREFMEEMSMRVRDS-GYRPSISDVLHKVVDEEKECALSEHSERFAIAYGL---- 506

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           L  +   VIRV KNLRVC DCHE IK +SK+ +   +VRD  RFH+F  G CSC D+W
Sbjct: 507 LKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 208/399 (52%), Gaps = 15/399 (3%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQ-NGNAKACLSLFCQMGSSSVK-PNEFTLST 118
           G +N A +VF ++   N+ SW +L+ G+ Q +  +K  + LF ++  +    PN FTL+ 
Sbjct: 38  GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            +KA  ++++   G+Q+H   +K GF  +  V  S+++ Y KC  I  A ++F+ MP ++
Sbjct: 98  VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           L+ W AMI+G+   G  D+ + LFR+MQ+ G  PD  T  S + AC   G++  G  +H 
Sbjct: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHA 217

Query: 239 FLITSGFPYSVKT--VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           ++      Y V T   ++ +LVD Y KCGC+  A++VF  +  K   +WSS+I+G+A   
Sbjct: 218 YIEK----YFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHG 273

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              +A++ F+Q+ E  +  D     +++   A   LV +G++   ++  +  G++ SV +
Sbjct: 274 LAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRF--WSLMLEFGIEPSVEH 331

Query: 357 --SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
               VD+  + GL++EA  +   M +  N  TW  ++ G  K  L      + R +L  +
Sbjct: 332 YGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLL--E 389

Query: 414 VEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
           +EP       ++S    S    E      ++  +K +KP
Sbjct: 390 LEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKP 428



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 156/311 (50%), Gaps = 6/311 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L+ C+       G+Q+H  ++K GF   L +   L++ Y KC E+  A  VF++M 
Sbjct: 95  LAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMP 154

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            RN+V+WTA++ G  + G     + LF +M  + ++P+  TL + + A  V  +++ G  
Sbjct: 155 VRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYW 214

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    K     +  +  +++DMY+KCG I  A ++F  MP K    W++MI G+   G 
Sbjct: 215 LHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGL 274

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           +   +  F++M E    PD  TF + L AC   G V  G +    ++  G   SV+    
Sbjct: 275 AQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHY-- 332

Query: 255 GSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEE--NLAEAMELFRQLRER 311
           G  VD   + G + EA R+   ++   +  +W SL++G  +++  NL E +  +  L   
Sbjct: 333 GCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARY-LLELE 391

Query: 312 SLQVDGFVLSS 322
            L  + +++ S
Sbjct: 392 PLNAENYIMIS 402


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/695 (33%), Positives = 363/695 (52%), Gaps = 80/695 (11%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G   H  ++K+G   D  + N ++DMYAK G+++ A  +F++M ER +  W +++ G  +
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +GN    + LF  M +                                        N + 
Sbjct: 174 SGNETEAVVLFNMMPAR---------------------------------------NIIT 194

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S++  Y+K G +  A R FD MP +S+++WNAM + Y       + L LF +M E G 
Sbjct: 195 WTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI 254

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQI-----------HGFLITSGFPYSVK--------- 250
            PD+ T+  T+ +C S+G       I           + F+ T+      K         
Sbjct: 255 TPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARN 314

Query: 251 ----------TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
                      V    ++  Y + G L  AR +FD + ++ V+SW+S+I GYAQ    A 
Sbjct: 315 IFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374

Query: 301 AMELFRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           ++ELF+++     +Q D   ++S++        ++    +     +    L  S  NS++
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLI 434

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
            MY KCG + +A  +F  M  ++VV++  +I+G+  +G  KEA+ L   M  + +EPD V
Sbjct: 435 FMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHV 494

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            Y+ VL+ACSH+GL+ E +  F  +       P ++HY+C+VD LGRAG LDEAK LI+S
Sbjct: 495 TYIGVLTACSHAGLLNEGKNVFKSI-----QAPTVDHYACMVDLLGRAGELDEAKMLIQS 549

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP+KP   ++ +LL+A R+H  + LG      L  L+  N  NYV++SNI+A  G W + 
Sbjct: 550 MPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDV 609

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
           +R+R++ +  GLKK  G SWVE   ++H F  GD +H  ++ I+++L E+E++MK  +GF
Sbjct: 610 KRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMK-RVGF 668

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
           V     AL D++EE KEE L  HSEKLAI  AL    L  + G  IRV KNLR+C DCH 
Sbjct: 669 VADKSCALRDVEEEEKEEMLGTHSEKLAICFAL----LISEVGTTIRVVKNLRICLDCHT 724

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            IK +SK+     VVRD  RFH F  G+CSC DYW
Sbjct: 725 AIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 68/294 (23%)

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           +S ++  Y++     + + LF+     +L+   FV   ++ +       + G   HAY  
Sbjct: 68  YSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG-----KSGNLFHAYVL 122

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLID-------------------------------EATE 373
           K+    D  + N+I+DMY K G +D                               EA  
Sbjct: 123 KLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVV 182

Query: 374 LFNEMPVKNVVTWTVIITGYGKHG-------------------------------LAKEA 402
           LFN MP +N++TWT ++TGY K G                                 KEA
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF +ML + + PD   ++  +S+CS  G    +     R+ + K +       + ++D
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSIL-RMIDQKHIVLNSFVKTALLD 301

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
              + G L+ A+N+ + +  + +   W  ++SA    G L L RE+ + + + D
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD 355


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 223/713 (31%), Positives = 378/713 (53%), Gaps = 44/713 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C +N+    G Q+HG +VK+G    + + N L+ +Y KCG ++    +F++M ER++
Sbjct: 203 LTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDI 262

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW  ++   ++          F  M     +K + F+LST + A         G Q+H 
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHA 322

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY-------- 189
           + +K G E +  V +S+I  Y+KCG  N+   +F+ MP + +ITW  MI  Y        
Sbjct: 323 LALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDS 382

Query: 190 ------------------VLAGYS-----DKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
                             VLAG S      + L LF +M E G    + T TS + ACG 
Sbjct: 383 AVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGL 442

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF--DLIEQKSVIS 284
           L S     QI GF++  G      + I  +LVD Y +CG + +A ++F    +E      
Sbjct: 443 LKSFKVSQQIQGFVMKFGI--LSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAM 500

Query: 285 WSSLILGYAQEENLAEAMELFRQ-LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
            +S+I GYA+   L EA+ LF     E ++ +D  + +S++ +       E G Q+H +A
Sbjct: 501 LTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHA 560

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
            K     +T V N+ V MY KC  +D+A  +FN M ++++V+W  ++ G+  H    +A+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHS--GLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           G+++KM    ++PD + +  ++SA  H+   LV+  +  F  +  +  +KP +EHY+  +
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
             LGR G L+EA+  I +MP++P + +W+ LL++CR++ +  L +     +L ++  +P+
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPL 740

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
           +Y++ SN+++ +G W   E++R+  R KG +K   +SW+  + +IH FY  D +HP  + 
Sbjct: 741 SYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKD 800

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I+  L E+      ++G+V    + L +++E  K+E L  HS KLA       G L  +P
Sbjct: 801 IYSGL-EILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATF----GILMTKP 855

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           GK I++ KN+R+CGDCH F+K +S + +   ++RD + FH F  G CSC DYW
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 39/454 (8%)

Query: 17  DSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           D LR  ++    D    +H   +K+    D+ L N LI  Y K G +  A  VF  +   
Sbjct: 102 DLLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCP 159

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           NVVS+TAL+ GF ++      + LF  M  S ++PNE+T    + A       + G Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G+ +K G      + N+++ +Y KCG ++   R+F+ MP + + +WN +I+  V     D
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 197 KGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
           +    FR MQ   G   D F+ ++ L AC        G Q+H   +  G    +   ++ 
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLS--VSS 337

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY----------------------- 292
           SL+ FY KCG   +   +F+ +  + VI+W+ +I  Y                       
Sbjct: 338 SLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCIS 397

Query: 293 --------AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
                   ++ ++ + A+ELF ++ E  +++    L+S++         +  +QI  +  
Sbjct: 398 YNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVM 457

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT--WTVIITGYGKHGLAKEA 402
           K     ++ +  ++VDMY +CG +++A ++F +  ++N  T   T +I GY ++G   EA
Sbjct: 458 KFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEA 517

Query: 403 VGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVE 435
           + LF     +  +  D V   ++LS C   G  E
Sbjct: 518 ISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHE 551



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 204/453 (45%), Gaps = 77/453 (16%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN---------- 64
           L+  L  C+ ++    G QLH   +K+G    L +++ LI  Y KCG  N          
Sbjct: 301 LSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMP 360

Query: 65  ---------------------GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
                                 A  VF+KM +RN +S+ A++ G  +N +    L LF +
Sbjct: 361 IRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIE 420

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M    V+ ++ TL++ I A G+L S +   QI G  MK G   N  +  +++DMY++CGR
Sbjct: 421 MLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGR 480

Query: 164 INEAARMFDVMPAKSLIT--WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTST 220
           + +A ++F     ++  T    +MI GY   G  ++ + LF   Q  G I  DE   TS 
Sbjct: 481 MEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSI 540

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L  CGS+G    G Q+H   + SG     +T +  + V  Y KC  + +A RVF+ +  +
Sbjct: 541 LSLCGSIGFHEMGMQMHCHALKSGL--ITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQ 598

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            ++SW+ L+ G+       +A+ +++++ +  ++ D             FAL+     I 
Sbjct: 599 DIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSIT----------FALI-----IS 643

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV-----IITGYGK 395
           AY                   + +  L+D    LF  M  ++ +  T+      I+  G+
Sbjct: 644 AYK------------------HTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGR 685

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            GL +EA    R M L   EPD   + A+L++C
Sbjct: 686 WGLLEEAEQTIRNMPL---EPDVYVWRALLNSC 715



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 128/257 (49%), Gaps = 3/257 (1%)

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  +L+  Y+K G + +A +VF  +   +V+S+++LI G+++ +   EA+ELF  + +  
Sbjct: 132 LGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSG 191

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           ++ + +   +++         + G Q+H    K+       + N+++ +Y KCG +D   
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVL 251

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVLSACSHS 431
            LF EMP +++ +W  +I+   K     EA   FR M L   ++ D  +   +L+AC+ S
Sbjct: 252 RLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGS 311

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
               + Q+  + L     ++  +   S ++    + G  ++  +L E+MP++  I  W  
Sbjct: 312 VKPMKGQQLHA-LALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT-WTG 369

Query: 492 LLSACRVHGDLELGREV 508
           ++++    G L+   EV
Sbjct: 370 MITSYMEFGMLDSAVEV 386



 Score = 39.7 bits (91), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T YG   LA+     F K+     E D     A++SA    GLV ++ + FS L      
Sbjct: 108 TRYGDPDLARAVHAQFLKL-----EEDIFLGNALISAYLKLGLVRDADKVFSGLSC---- 158

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGRE 507
            P +  Y+ ++    ++   DEA  L  +M    ++P+   +  +L+AC  + D +LG +
Sbjct: 159 -PNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQ 217

Query: 508 VGEILLRL 515
           V  I+++L
Sbjct: 218 VHGIVVKL 225


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/567 (34%), Positives = 325/567 (57%), Gaps = 13/567 (2%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS--LITWNAMIAGY 189
           G ++H   +K G+  + ++ N +I+MY KCG I EA  +FD +  K+  +I+WN +I  Y
Sbjct: 43  GKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAY 102

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G   + L LF+ M   G I ++ T  + + AC SL S   G  +H   +        
Sbjct: 103 TQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRL--ES 160

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
            T++  SLV+ + KC  +  AR VFD + +K++++W++++  Y+Q     +A+++FR + 
Sbjct: 161 DTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMD 220

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIH--AYAAKVPSGLDTSVSNSIVDMYLKCGL 367
              +Q D     +++   A  A   +G+ +H    A+ +P  +D ++  +++  Y KCG 
Sbjct: 221 LEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIP--MDVALGTAVMHFYGKCGR 278

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           +D A  +F+ +  KN VTW+ I+  Y ++G   EA+ L+ +M+   +E +G+ +L +L A
Sbjct: 279 LDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFA 338

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSH+G   +  +YF  +  D  + P  EHY  ++D LGR+G+L  +++LI SMP +P  +
Sbjct: 339 CSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSS 398

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            W  LL ACR+HGD++ G  + E++  LD ++   Y+++SN+++  G  +E  R RK  R
Sbjct: 399 AWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMR 458

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            +G+ K  G S +EV   +H F      HP   +IH  +  ++ R+KE  G+V  V+  L
Sbjct: 459 LRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEA-GYVADVRAVL 517

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
            D++EE KE+ L  HSE+LAI   L+    +  PG  + + KNLRVC DCH  +K +SK+
Sbjct: 518 RDVEEEEKEQLLWYHSERLAIAFGLI----STPPGTALHIVKNLRVCFDCHAAVKAISKV 573

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +    VVRDA RFH FE G CSCGDYW
Sbjct: 574 VGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 16/292 (5%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T+   LK C    ++  G ++H  L+  G  Y+   +IA  L++ Y KCG + EAR VFD
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDG--YASDRLIANLLIEMYGKCGGIAEARSVFD 83

Query: 276 LIEQKS--VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALV 333
            I++K+  VISW+ +I  Y Q     EA+ LF+ +    +  +   L + +   A     
Sbjct: 84  QIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSE 143

Query: 334 EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGY 393
           E+G+ +HA A       DT V  S+V+M+ KC  +D A  +F+ +P KN+VTW  ++  Y
Sbjct: 144 EEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVY 203

Query: 394 GKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC----SHS-GLVEESQEYFSRLCNDK 448
            ++   K+A+ +FR M L+ V+PD V +L ++ AC    +H+ G +       S +  D 
Sbjct: 204 SQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDV 263

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            +   + H+       G+ GRLD A+ + +S+  K ++  W  +L+A   +G
Sbjct: 264 ALGTAVMHF------YGKCGRLDNARAIFDSLGKKNTVT-WSAILAAYAQNG 308



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 111/221 (50%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +++ +  L +++  C+     + G  +H   V      D M+   L++M+ KC  ++ A 
Sbjct: 123 VIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAAR 182

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
           AVFD +  +N+V+W  ++  + QN   K  + +F  M    V+P+  T  T I A   L+
Sbjct: 183 AVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALA 242

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           +   G  +H     SG   +  +G +++  Y KCGR++ A  +FD +  K+ +TW+A++A
Sbjct: 243 AHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILA 302

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            Y   GY  + + L+ +M + G   +  TF   L AC   G
Sbjct: 303 AYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAG 343


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/647 (33%), Positives = 358/647 (55%), Gaps = 28/647 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N L+  Y K G ++ A  VFDKM ERNVVSWT+++ G++Q G       LF +M      
Sbjct: 82  NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM------ 135

Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           P +  +S  +   G++    V+   ++  M        + V   ++I      GR++EA 
Sbjct: 136 PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVK----DVVASTNMIGGLCSEGRLSEAR 191

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
            +FD MP ++++ W +MI+GY +    D    LF  M +  E+    T+T+ LK     G
Sbjct: 192 EIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEV----TWTAMLKGYTRSG 247

Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
            +    ++         P        G ++ F +  G + +AR VFD +++K   +WS+L
Sbjct: 248 RINEAAELF-----KAMPVKPVAACNGMIMGFGLN-GEVGKARWVFDQMKEKDDGTWSAL 301

Query: 289 ILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPS 348
           I  Y ++    EA+ LF  ++   ++ +   + S++ V    A ++ G+Q+H+   +   
Sbjct: 302 IKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHF 361

Query: 349 GLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
            LD  VS+ ++ MY+KCG +     +F+    K++V W  II GY +HG  ++A+ +F +
Sbjct: 362 DLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHE 421

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M      PD + ++ VLSAC ++G V+E  E F  + +  ++  + EHY+C+VD LGRAG
Sbjct: 422 MFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAG 481

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
           +L+EA NLIE+MPV+    +W  LLSACR H +L+L     + LL+L+  +   Y+++SN
Sbjct: 482 KLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSN 541

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD-THPLTEKIHQVLM 587
           ++A    W +   LRK  R++ + K  G SW+EVD ++H F GG   +HP  E I + L 
Sbjct: 542 LYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLE 601

Query: 588 EMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRV 647
           ++   ++E  G+     + +HD+ EE K  SLR HSEK+A+   L++  +    GK IRV
Sbjct: 602 KLGASLREA-GYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPV----GKPIRV 656

Query: 648 FKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            KNLRVCGDCH  IK ++++     ++RDA RFH F+ G+CSC D+W
Sbjct: 657 MKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 18/385 (4%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++ + ++I      G ++ A  +FD+M +RNVV+WT+++ G+  N        LF  M 
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPVVG-NSIIDMYSKCGR 163
                 NE T +  +K       +    ++   M +K      PV   N +I  +   G 
Sbjct: 230 DK----NEVTWTAMLKGYTRSGRINEAAELFKAMPVK------PVAACNGMIMGFGLNGE 279

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
           + +A  +FD M  K   TW+A+I  Y   G+  + L LF  MQ  G  P+  +  S L  
Sbjct: 280 VGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSV 339

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           CGSL S+  G Q+H  L+ S F   +   ++  L+  Y+KCG LV  +RVFD    K ++
Sbjct: 340 CGSLASLDHGRQVHSQLVRSHFDLDI--YVSSVLITMYIKCGDLVTGKRVFDRFSSKDIV 397

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAY 342
            W+S+I GYAQ     +A+E+F ++       D      ++        V++G +I  + 
Sbjct: 398 MWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESM 457

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKE 401
            +K      T     +VD+  + G ++EA  L   MPV+ + + W  +++    H     
Sbjct: 458 KSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDL 517

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLS 426
           A    +K+L   +EP       +LS
Sbjct: 518 AEIAAKKLL--QLEPSSAGPYILLS 540



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 203/467 (43%), Gaps = 61/467 (13%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FS    +    I  +A+ G+++ A  +FD +  + V SW A++ G+  N        LF 
Sbjct: 12  FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
           +M      P   T+S                            WN +V       Y K G
Sbjct: 72  KM------PERNTIS----------------------------WNGLVSG-----YVKNG 92

Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
            I+EA ++FD MP +++++W +M+ GYV  G  D+  LLF +M E   +    ++T  L 
Sbjct: 93  MISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV----SWTVMLG 148

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVEARRVFDLIEQKS 281
                G V    ++   +        VK V+A + ++      G L EAR +FD + Q++
Sbjct: 149 GLIEDGRVDEARRLFDMI-------PVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRN 201

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
           V++W+S+I GYA    +  A +LF  + ++    +    ++M+  +     + +  ++  
Sbjct: 202 VVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAELFK 257

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
                P     +  N ++  +   G + +A  +F++M  K+  TW+ +I  Y + G   E
Sbjct: 258 AMPVKP----VAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELE 313

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+ LF  M  + V P+  + +++LS C     ++  ++  S+L         I   S ++
Sbjct: 314 ALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS-HFDLDIYVSSVLI 372

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
               + G L   K + +    K  I +W ++++    HG  E   EV
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEV 418



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 88/428 (20%)

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
           M+   +  +S F  +  +    I  +++ G+I+ A  +FD + +K++ +WNA++AGY   
Sbjct: 1   MRFRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHN 60

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
               +   LF KM E                                           T+
Sbjct: 61  KRPAEAQKLFDKMPERN-----------------------------------------TI 79

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
               LV  YVK G + EAR+VFD + +++V+SW+S++ GY QE  + EA  LF ++ E++
Sbjct: 80  SWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKN 139

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           +       + M+G   +   V++ +++      +P   D   S +++      G + EA 
Sbjct: 140 V----VSWTVMLGGLIEDGRVDEARRLFDM---IPVK-DVVASTNMIGGLCSEGRLSEAR 191

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG--VAYLAVLSACSH 430
           E+F+EMP +NVV WT +I+GY  +     A  LF      +V PD   V + A+L   + 
Sbjct: 192 EIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF------EVMPDKNEVTWTAMLKGYTR 245

Query: 431 SGLVEESQEYFSRL-------CND------------------KRMKPRIE-HYSCIVDSL 464
           SG + E+ E F  +       CN                    +MK + +  +S ++   
Sbjct: 246 SGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIY 305

Query: 465 GRAGRLDEAKNLIESMP---VKPSIAIWQTLLSACRVHGDLELGREVGEILLR--LDGDN 519
            R G   EA  L   M    V+P+     ++LS C     L+ GR+V   L+R   D D 
Sbjct: 306 ERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDI 365

Query: 520 PVNYVMMS 527
            V+ V+++
Sbjct: 366 YVSSVLIT 373



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 4/173 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C     LD+G Q+H  LV+  F  D+ +++ LI MY KCG++     VFD+   +++
Sbjct: 337 LSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDI 396

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W +++ G+ Q+G  +  L +F +M SS   P+E T    + A G    V+ G++I   
Sbjct: 397 VMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFE- 455

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
            MKS ++ +    +   ++D+  + G++NEA  + + MP ++  I W A+++ 
Sbjct: 456 SMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508


>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
 gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
          Length = 601

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/612 (34%), Positives = 343/612 (56%), Gaps = 13/612 (2%)

Query: 85  MCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQIHGMCMKS 142
           M  + +N   K  L LF +  +  ++ N+ T  T +K+   L    +E+G +IH   +  
Sbjct: 1   MGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQ 60

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           GF  + VV NS+I MY+KCG    AA +FD M  K+LI++ +MI  Y       +   L+
Sbjct: 61  GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELY 120

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYV 262
           +KM   G +PD + + + L  C ++     G  IH   +  G       V + +LV  Y 
Sbjct: 121 KKMLSEGIMPDIYAYAAALAVCPTIRE---GEAIH---VKLGNHERRTPVCSNALVGMYG 174

Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
           + G +  A+ VFD I  K + S++++I  +A+ ++ ++A+ L+ ++  R+L+ + +  +S
Sbjct: 175 RFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTS 234

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
           ++   +    + +GK+IH          D + + ++V+MY KCG   EA  +FN+  +KN
Sbjct: 235 VLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKN 294

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           V TWT +++ Y + G ++  +  +++M  + V PD V + A+ +ACSHSGL +E   YF 
Sbjct: 295 VFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFR 354

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  D  + P   HY+C++D LGR GRL EA+ L+ +MP  P +  W  LLSAC+V+GDL
Sbjct: 355 AMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDL 414

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ++G    + +  L+  +   Y++M N++A AG W +   ++K+ + +GL K  G+S +E 
Sbjct: 415 KIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEA 474

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
            + IH F  GD  HPL ++I   L E+ +++    G+    K  L D+ EE K E L  H
Sbjct: 475 QRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHA-GYEPDTKEVLVDVNEEVKPELLLFH 533

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SE++A+GL L    L    G  + + KNLR+C DCH F K +SK+L    +VRD+ RFH 
Sbjct: 534 SERMALGLGL----LTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHI 589

Query: 683 FEGGVCSCGDYW 694
           F+ G CSCGDYW
Sbjct: 590 FQRGSCSCGDYW 601



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 25/405 (6%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L+ G ++H   +  GF  DL++ N LI MYAKCG    A  VFDKM  +N++S+T+++  
Sbjct: 47  LEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQA 106

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           +           L+ +M S  + P+ +  +    A  V  ++  G  IH + + +     
Sbjct: 107 YTHTAKHVEAYELYKKMLSEGIMPDIYAYAA---ALAVCPTIREGEAIH-VKLGNHERRT 162

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD--KGLLLFRKM 205
           PV  N+++ MY + GRI  A  +FD +  K L ++N MIA  V A Y D  K + L+ +M
Sbjct: 163 PVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIA--VFAKYDDGSKAISLYIEM 220

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +     P+ +T+TS L AC  LG++  G +IH  +     P  V    A  LV+ Y KCG
Sbjct: 221 EGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTA--LVNMYAKCG 278

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
              EAR VF+    K+V +W+SL+  Y+Q       +E ++++    +  D    +++  
Sbjct: 279 SAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFN 338

Query: 326 VFADFALVEQG-------KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
             +   L ++G       ++ H      P          ++D+  + G + EA EL   M
Sbjct: 339 ACSHSGLPDEGLLYFRAMREDHWIVPLQPH------YTCMIDLLGRVGRLREAEELVRTM 392

Query: 379 PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           P   +VVTWT++++    +G  K     +++ + +   PD   YL
Sbjct: 393 PYSPDVVTWTILLSACKVYGDLKIGARAYKR-ITELNPPDSGPYL 436


>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/536 (37%), Positives = 318/536 (59%), Gaps = 3/536 (0%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  L+  GF  DL LN  LI  Y K G++  A  VFD M ER+VVSWTA++ G+ Q
Sbjct: 170 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 229

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +    LF  M    VK N+FT  + ++A   L  ++ G+Q+ G   K  F  N  V
Sbjct: 230 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 289

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            ++++D +SKCG++ +A+ +F  M  + +++WNAMI GY + G++D    +FR M   G 
Sbjct: 290 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 349

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           +PD +T  S L+A    G +    QIHG +   G  Y    ++ G L++ Y K G L  A
Sbjct: 350 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLG--YGSYDIVTGLLINAYAKNGSLRSA 407

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           + +   + +K + S ++LI GYA E   + +A++LF+++ + ++ +D  +L SM+ + A+
Sbjct: 408 KDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICAN 467

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            A    G QIHA+A K     D ++ N+++DMY K G I++A   F+EM  KNV++WT +
Sbjct: 468 LASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 527

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+GY KHG    AV L++KM     +P+ V +L++L ACSH+GL  E  E F+ + N   
Sbjct: 528 ISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYN 587

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           +KPR EHYSC+VD   R G L+EA NL+  + +K + ++W  +L A  ++G + LG+E  
Sbjct: 588 IKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAA 647

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             L  +  +N VNYV++++I++ AG W++  ++RKL   +  KK AG S+ +  K+
Sbjct: 648 SNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 703



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 220/432 (50%), Gaps = 24/432 (5%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +LR C+    LD G+Q+ G + K  F  +L + + L+D ++KCG+M  A  +F  M+ER+
Sbjct: 258 ALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERD 317

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSW A++ G+   G A     +F  M    + P+ +TL + ++AS     +    QIHG
Sbjct: 318 VVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHG 377

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG-YSD 196
           +  + G+    +V   +I+ Y+K G +  A  +   M  K L +  A+I GY   G YS 
Sbjct: 378 IITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSV 437

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             L LF++M +     D+    S L  C +L S   GTQIH F +     Y V   +  +
Sbjct: 438 DALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDV--AMGNA 495

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L+D Y K G + +A+R FD +E+K+VISW+SLI GYA+      A+ L++++  +  + +
Sbjct: 496 LIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPN 555

Query: 317 GFVLSSMMGVFADFALVEQG-----KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
                S++   +   L  +G       ++ Y  K P     S    +VD++ + GL++EA
Sbjct: 556 DVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIK-PRAEHYSC---MVDLFARQGLLEEA 611

Query: 372 TELFNEMPVK-NVVTWTVIITG---YGKHGLAKEAV-GLFRKMLLDDVEPDG-VAYLAVL 425
             L  ++ +K N   W  I+     YG   L KEA   LF      +++P+  V Y+ + 
Sbjct: 612 YNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLF------NMQPENSVNYVVLA 665

Query: 426 SACSHSGLVEES 437
           S  S +GL +++
Sbjct: 666 SIYSAAGLWDDA 677



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 194/375 (51%), Gaps = 11/375 (2%)

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           + G  IH   + +GF  +  +   +I  Y K G +  A  +FD MP +S+++W AM++GY
Sbjct: 168 KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 227

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G  +K  +LF  M+  G   ++FT+ S L+AC SL  +  G Q+ G +    F  ++
Sbjct: 228 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENL 287

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
              +  +LVDF+ KCG + +A  +F  + ++ V+SW+++I GYA +    ++  +FR + 
Sbjct: 288 --FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 345

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              L  D + L S++   A+   +    QIH    ++  G    V+  +++ Y K G + 
Sbjct: 346 RGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 405

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGL-AKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            A +L   M  K++ + T +ITGY   G+ + +A+ LF++M   ++  D V   ++L+ C
Sbjct: 406 SAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 465

Query: 429 SH-SGLVEESQEYFSRLCNDKRMKPR--IEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           ++ +     +Q +   L    + +P   +   + ++D   ++G +++AK   + M  K  
Sbjct: 466 ANLASFALGTQIHAFAL----KYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNV 521

Query: 486 IAIWQTLLSACRVHG 500
           I+ W +L+S    HG
Sbjct: 522 IS-WTSLISGYAKHG 535



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 147/288 (51%), Gaps = 8/288 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGA 66
           LV +   L   LR  ++   L    Q+HG + ++G+ S+D+ +   LI+ YAK G +  A
Sbjct: 349 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDI-VTGLLINAYAKNGSLRSA 407

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNG-NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
             +   ML++++ S TAL+ G+   G  +   L LF +M   ++  ++  L + +     
Sbjct: 408 KDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICAN 467

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L+S   G QIH   +K    ++  +GN++IDMY+K G I +A R FD M  K++I+W ++
Sbjct: 468 LASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 527

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I+GY   GY    + L++KM+  G  P++ TF S L AC   G    G +    ++    
Sbjct: 528 ISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVN--- 584

Query: 246 PYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILG 291
            Y++K        +VD + + G L EA  +   I+ K   S    ILG
Sbjct: 585 KYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILG 632



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 6/184 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+       G Q+H   +K   S+D+ + N LIDMYAK GE+  A   FD+M 
Sbjct: 458 LCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME 517

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT-LSTNIKASGVLSSVENGM 133
           E+NV+SWT+L+ G+ ++G     +SL+ +M S   KPN+ T LS     S    + E   
Sbjct: 518 EKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCE 577

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF---DVMPAKSLITWNAMIAGYV 190
             + M  K   +      + ++D++++ G + EA  +    D+    SL  W A++    
Sbjct: 578 CFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASL--WGAILGASS 635

Query: 191 LAGY 194
           + GY
Sbjct: 636 IYGY 639


>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
 gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g52630
 gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
          Length = 588

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/573 (36%), Positives = 335/573 (58%), Gaps = 8/573 (1%)

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
           +S    S   G+Q+HG  +KSG    P+V N++I+ YSK     ++ R F+  P KS  T
Sbjct: 24  SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W+++I+ +         L   +KM      PD+    S  K+C  L     G  +H   +
Sbjct: 84  WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +G  Y     +  SLVD Y KCG +V AR++FD + Q++V++WS ++ GYAQ     EA
Sbjct: 144 KTG--YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LF++    +L V+ +  SS++ V A+  L+E G+QIH  + K      + V +S+V +
Sbjct: 202 LWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG+ + A ++FNE+PVKN+  W  ++  Y +H   ++ + LF++M L  ++P+ + +
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L VL+ACSH+GLV+E + YF ++  + R++P  +HY+ +VD LGRAGRL EA  +I +MP
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
           + P+ ++W  LL++C VH + EL     + +  L   +   ++ +SN +A  G + +  +
Sbjct: 381 IDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAK 440

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
            RKL R +G KK  G SWVE   ++H F  G+  H  +++I++ L E+ + M E+ G++ 
Sbjct: 441 ARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEM-EKAGYIA 499

Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFI 661
              Y L ++  + K +++R HSE+LAI   L+    +    + IRV KNLRVCGDCH  I
Sbjct: 500 DTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPAD----RPIRVMKNLRVCGDCHNAI 555

Query: 662 KGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           K +S   + V +VRD  RFHRFE G CSC DYW
Sbjct: 556 KFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 202/369 (54%), Gaps = 7/369 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G+QLHG +VK G S   ++ N+LI+ Y+K      +   F+   +++  +W++++  F Q
Sbjct: 34  GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           N      L    +M + +++P++  L +  K+  +LS  + G  +H + MK+G++ +  V
Sbjct: 94  NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           G+S++DMY+KCG I  A +MFD MP ++++TW+ M+ GY   G +++ L LF++      
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
             ++++F+S +  C +   +  G QIHG  ++    +   + +  SLV  Y KCG    A
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHG--LSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
            +VF+ +  K++  W++++  YAQ  +  + +ELF++++   ++ +     +++   +  
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT-WT 387
            LV++G+  + +     S ++ +  +  S+VDM  + G + EA E+   MP+    + W 
Sbjct: 332 GLVDEGR--YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389

Query: 388 VIITGYGKH 396
            ++T    H
Sbjct: 390 ALLTSCTVH 398



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 2/259 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L  + + C+     D G  +H   +K G+  D+ + + L+DMYAKCGE+  A  +FD+M 
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +RNVV+W+ +M G+ Q G  +  L LF +    ++  N+++ S+ I      + +E G Q
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+ +KS F+ +  VG+S++ +YSKCG    A ++F+ +P K+L  WNAM+  Y    +
Sbjct: 239 IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           + K + LF++M+  G  P+  TF + L AC   G V  G      +  S    + K    
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY-- 356

Query: 255 GSLVDFYVKCGCLVEARRV 273
            SLVD   + G L EA  V
Sbjct: 357 ASLVDMLGRAGRLQEALEV 375



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 1/167 (0%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+ + LL+ G Q+HG  +K  F     + + L+ +Y+KCG   GA  VF+++  +N+  W
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            A++  + Q+ + +  + LF +M  S +KPN  T    + A      V+ G        +
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIA 187
           S  E       S++DM  + GR+ EA  +   MP     + W A++ 
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393


>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g66520-like [Glycine max]
          Length = 622

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/601 (35%), Positives = 336/601 (55%), Gaps = 40/601 (6%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           S++   Q H   + +    +PV  N ++ + + C  ++ A ++FD +P   L  +N MI 
Sbjct: 28  SMQQIKQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQPDLFIYNTMIK 86

Query: 188 GYVLAGYS-DKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
            + L+ +S    L++FR + Q+ G  P+ ++F     ACG+   V  G Q+    +  G 
Sbjct: 87  AHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGL 146

Query: 246 PYSVKTVIA-----------------------------GSLVDFYVKCGCLVEARRVFDL 276
             +V  V A                              +L+  YV  G +  A+ +FD 
Sbjct: 147 ENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDG 206

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           + ++ V+SWS++I GY Q     EA++ F ++ +   + + + L S +   ++   ++QG
Sbjct: 207 MRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQG 266

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV-TWTVIITGYGK 395
           K IHAY  K    ++  +  SI+DMY KCG I+ A+ +F E  VK  V  W  +I G+  
Sbjct: 267 KWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAM 326

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG+  EA+ +F +M ++ + P+ V ++A+L+ACSH  +VEE + YF  + +D  + P IE
Sbjct: 327 HGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIE 386

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HY C+VD L R+G L EA+++I SMP+ P +AIW  LL+ACR++ D+E G  +G I+  +
Sbjct: 387 HYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGM 446

Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLR-KLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           D ++   +V++SNI++ +G WNE   LR K   S+  KK+ G S +E+    H F  GD 
Sbjct: 447 DPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQ 506

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI-QEESKEESLRVHSEKLAIGLALV 633
           +HP + +I+  L EM  ++K   G+V  +   LHDI  EE KE +L VHSEKLAI   L 
Sbjct: 507 SHPQSREIYSFLDEMTTKLKSA-GYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGL- 564

Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
              +N   G  IR+ KNLRVCGDCH+  K +SK+   V +VRD TR+H FE G+CSC DY
Sbjct: 565 ---MNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDY 621

Query: 694 W 694
           W
Sbjct: 622 W 622



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 127/246 (51%), Gaps = 3/246 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           DL   N LI  Y   G M+ A  +FD M ER+VVSW+ ++ G++Q G     L  F +M 
Sbjct: 180 DLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKML 239

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
               KPNE+TL + + A   L +++ G  IH    K   + N  +  SIIDMY+KCG I 
Sbjct: 240 QIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIE 299

Query: 166 EAARMFDVMPAKSLI-TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
            A+R+F     K  +  WNAMI G+ + G  ++ + +F +M+     P++ TF + L AC
Sbjct: 300 SASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNAC 359

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
            S G +    +++  L+ S +  + +    G +VD   + G L EA  +   +     ++
Sbjct: 360 -SHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVA 418

Query: 285 -WSSLI 289
            W +L+
Sbjct: 419 IWGALL 424



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 174/397 (43%), Gaps = 41/397 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF-LQN 91
           Q H  L+        +  N L+ + A C  ++ A  +FD++ + ++  +  ++    L  
Sbjct: 34  QTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSP 92

Query: 92  GNAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
            +    L +F  +     + PN ++      A G    V+ G Q+    +K G E N  V
Sbjct: 93  HSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFV 152

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV-------------------- 190
            N++I MY K G + E+ ++F     + L +WN +IA YV                    
Sbjct: 153 VNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDV 212

Query: 191 ------LAGYSDKG-----LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
                 +AGY   G     L  F KM + G  P+E+T  S L AC +L ++  G  IH +
Sbjct: 213 VSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAY 272

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF--DLIEQKSVISWSSLILGYAQEEN 297
           +       + +  +  S++D Y KCG +  A RVF    ++QK V  W+++I G+A    
Sbjct: 273 IGKGEIKMNER--LLASIIDMYAKCGEIESASRVFFEHKVKQK-VWLWNAMIGGFAMHGM 329

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK-QIHAYAAKVPSGLDTSVSN 356
             EA+ +F Q++   +  +     +++   +   +VE+GK       +      +     
Sbjct: 330 PNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYG 389

Query: 357 SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
            +VD+  + GL+ EA ++ + MP+  +V  W  ++  
Sbjct: 390 CMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNA 426



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 50/322 (15%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
             S + +C S+  +    Q H  LIT+     +   ++ + +     C  L  A ++FD 
Sbjct: 19  LVSLIDSCKSMQQI---KQTHAQLITTAL---ISHPVSANKLLKLAACASLSYAHKLFDQ 72

Query: 277 IEQKSVISWSSLILGYA-QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL--- 332
           I Q  +  ++++I  ++    +   ++ +FR L     Q  G   +    VFA  A    
Sbjct: 73  IPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLT----QDLGLFPNRYSFVFAFSACGNG 128

Query: 333 --VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE-------------------- 370
             V++G+Q+  +A KV    +  V N+++ MY K GL+ E                    
Sbjct: 129 LGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLI 188

Query: 371 -----------ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
                      A ELF+ M  ++VV+W+ II GY + G   EA+  F KML    +P+  
Sbjct: 189 AAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEY 248

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDK-RMKPRIEHYSCIVDSLGRAGRLDEAKNLIE 478
             ++ L+ACS+   +++ +   + +   + +M  R+   + I+D   + G ++ A  +  
Sbjct: 249 TLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERL--LASIIDMYAKCGEIESASRVFF 306

Query: 479 SMPVKPSIAIWQTLLSACRVHG 500
              VK  + +W  ++    +HG
Sbjct: 307 EHKVKQKVWLWNAMIGGFAMHG 328



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV-FDKM 73
           L  +L  CS  + LD G  +H  + K     +  L   +IDMYAKCGE+  A  V F+  
Sbjct: 250 LVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHK 309

Query: 74  LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           +++ V  W A++ GF  +G     +++F QM    + PN+ T    + A      VE G 
Sbjct: 310 VKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEG- 368

Query: 134 QIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMI 186
           +++   M S +   P + +   ++D+ S+ G + EA  M   MP A  +  W A++
Sbjct: 369 KLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALL 424


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/549 (36%), Positives = 314/549 (57%), Gaps = 12/549 (2%)

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           WN ++G      Y K G +  A ++FD MPA+++ TWNAM+AG   +G +++ L  F  M
Sbjct: 111 WNILIGG-----YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 165

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +  G  PDE+   S  + C  L  V  G Q+H +++ SG    +   +  SL   Y++CG
Sbjct: 166 RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDM--CVGSSLAHMYMRCG 223

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L +       +   +++S ++ I G  Q  +   A+E F  +R   ++ +     S + 
Sbjct: 224 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 283

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +D A + QG+QIHA A K        V  S+V MY +CG + ++  +  E    ++V 
Sbjct: 284 SCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            + +I+ YG HG  ++AVGLF++M+    EP+ V +L +L ACSHSGL +E    F  + 
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMT 403

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               ++P ++HY+CIVD LGR+G L+EA++LI SMPV+P   IW+TLLSAC+     ++ 
Sbjct: 404 KTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 463

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             + E ++ LD  +  +YV++SNI A +  W +  ++R+  R + ++K  G SWVE+  +
Sbjct: 464 ERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQ 523

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F  GD++H    +I + L EM  R++ + G+   +    HD+++E KE SL  HSEK
Sbjct: 524 IHQFCTGDESHSRQREIVECLEEMMTRIR-QCGYAPDMSMVFHDMEDEEKEVSLAHHSEK 582

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI  A     L+   G  IRV KNLRVC DCH  IK +SK++    VVRD +RFH F+ 
Sbjct: 583 LAIAFAF----LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKD 638

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 639 GKCSCGDYW 647



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 171/350 (48%), Gaps = 6/350 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++M  N LI  Y K G++  A  +FD+M  RNV +W A++ G   +G  +  L  F  M 
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              ++P+E+ L +  +    L  V +G Q+H   ++SG + +  VG+S+  MY +CG + 
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +       +P+ ++++ N  I+G    G ++  L  F  M+  G   +  TF S + +C 
Sbjct: 227 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 286

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G QIH   I +G    V  +   SLV  Y +CGCL ++ RV        ++  
Sbjct: 287 DLAALAQGQQIHALAIKTGVDKVVPVMT--SLVHMYSRCGCLGDSERVCLEYSGTDLVLC 344

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I  Y    +  +A+ LF+Q+     + +     +++   +   L ++G        K
Sbjct: 345 SAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 404

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG 392
              GL  SV +   IVD+  + G ++EA +L   MPV+ + V W  +++ 
Sbjct: 405 T-YGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 8/304 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L    RCC+    +  G Q+H  +V+ G   D+ + + L  MY +CG +    A    + 
Sbjct: 177 LGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALP 236

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             N+VS    + G  QNG+A+  L  FC M  + V+ N  T  + + +   L+++  G Q
Sbjct: 237 SLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQ 296

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH + +K+G +    V  S++ MYS+CG + ++ R+        L+  +AMI+ Y   G+
Sbjct: 297 IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGH 356

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
             K + LF++M   G  P+E TF + L AC   G    G      +  T G   SVK   
Sbjct: 357 GQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYT 416

Query: 254 AGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +VD   + GCL EA   +  +  Q   + W +L+     ++      ++  ++ ER 
Sbjct: 417 C--IVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKF----DMAERIAERV 470

Query: 313 LQVD 316
           +++D
Sbjct: 471 IELD 474



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +Q+HA+AA   +  D   +N ++  Y   G    A  LF  +P +NV++W ++I GY K+
Sbjct: 62  RQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKN 121

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           G  + A  LF +M   +V      + A+++  ++SGL EES  +F
Sbjct: 122 GDLETARKLFDEMPARNV----ATWNAMVAGLTNSGLNEESLGFF 162


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/571 (37%), Positives = 329/571 (57%), Gaps = 12/571 (2%)

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L S+    ++    + SGFE +  V N ++ ++ KCG + +A ++FD MP K + +W  M
Sbjct: 130 LRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTM 189

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I G+V +G   +   LF  M E        TFT+ ++A   LG V  G QIH   +  G 
Sbjct: 190 IGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGV 249

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
                T ++ +L+D Y KCG + +A  VFD + +K+ + W+S+I  YA      EA+  +
Sbjct: 250 --GDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFY 307

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV--SNSIVDMYL 363
            ++R+   ++D F +S ++ + A  A +E  KQ HA  A V  G DT +  + ++VD Y 
Sbjct: 308 YEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHA--ALVRRGYDTDIVANTALVDFYS 365

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           K G +++A  +FN M  KNV++W  +I GYG HG  +EAV +F +ML + + P+ V +LA
Sbjct: 366 KWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLA 425

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
           VLSACS+SGL E   E F  +  D ++KPR  HY+C+V+ LGR G LDEA  LI S P K
Sbjct: 426 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFK 485

Query: 484 PSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLR 543
           P+  +W TLL+ACR+H +LELG+   E L  ++ +   NY+++ N++  +G   E   + 
Sbjct: 486 PTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVL 545

Query: 544 KLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGV 603
           +  + KGL+ +   +W+EV K+ + F  GD +H  T++I++ +  M   +    G+V   
Sbjct: 546 QTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRH-GYVEEN 604

Query: 604 KYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKG 663
           K  L D+ EE ++  L+ HSEKLAI   L+    N      +++ +  RVCGDCH  IK 
Sbjct: 605 KALLPDVDEE-EQRILKYHSEKLAIAFGLI----NTPHWTPLQITQGHRVCGDCHSAIKF 659

Query: 664 LSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           ++ +     VVRDA+RFH F  G CSCGDYW
Sbjct: 660 IAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 228/482 (47%), Gaps = 58/482 (12%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           +V  GF  DL + N ++ ++ KCG M  A  +FD+M E+++ SW  ++ GF+ +GN    
Sbjct: 143 MVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEA 202

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
             LF  M          T +T I+AS  L  V+ G QIH   +K G   +  V  ++IDM
Sbjct: 203 FGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDM 262

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           YSKCG I +A  +FD MP K+ + WN++IA Y L GYS++ L  + +M++ G   D FT 
Sbjct: 263 YSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTI 322

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
           +  ++ C  L S+    Q H  L+  G  Y    V   +LVDFY K G + +A  VF+ +
Sbjct: 323 SIVIRICARLASLEYAKQAHAALVRRG--YDTDIVANTALVDFYSKWGRMEDAWHVFNRM 380

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
            +K+VISW++LI GY       EA+E+F Q+    +  +     +++   +   L E+G 
Sbjct: 381 RRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGW 440

Query: 338 QIHAYAAK----VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG 392
           +I    ++     P  +  +    +V++  + GL+DEA EL    P K     W  ++T 
Sbjct: 441 EIFYSMSRDHKVKPRAMHYAC---MVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTA 497

Query: 393 ----------------------------------YGKHGLAKEAVGLFRKMLLDDVEPDG 418
                                             Y   G  KEA G     +L  ++  G
Sbjct: 498 CRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAG-----VLQTLKRKG 552

Query: 419 VAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD---SLGRAGRLDEAKN 475
              L +L AC+    +E  ++ ++ LC DK      E Y  + +    + R G ++E K 
Sbjct: 553 ---LRMLPACT---WIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKA 606

Query: 476 LI 477
           L+
Sbjct: 607 LL 608



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 143/273 (52%), Gaps = 2/273 (0%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L+  G Q+H   +K G   D  ++  LIDMY+KCG +  A  VFD+M E+  V W +++ 
Sbjct: 233 LVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIA 292

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
            +  +G ++  LS + +M  S  K + FT+S  I+    L+S+E   Q H   ++ G++ 
Sbjct: 293 SYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDT 352

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           + V   +++D YSK GR+ +A  +F+ M  K++I+WNA+IAGY   G  ++ + +F +M 
Sbjct: 353 DIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQML 412

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G IP+  TF + L AC   G    G +I  + ++       + +    +V+   + G 
Sbjct: 413 REGMIPNHVTFLAVLSACSYSGLSERGWEIF-YSMSRDHKVKPRAMHYACMVELLGREGL 471

Query: 267 LVEARRVFDLIEQKSVIS-WSSLILGYAQEENL 298
           L EA  +      K   + W++L+      ENL
Sbjct: 472 LDEAYELIRSAPFKPTTNMWATLLTACRMHENL 504



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +R C++   L+Y  Q H ALV+ G+  D++ N  L+D Y+K G M  A  VF++M  +NV
Sbjct: 326 IRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNV 385

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           +SW AL+ G+  +G  +  + +F QM    + PN  T    + A       E G +I + 
Sbjct: 386 ISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYS 445

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           M      +   +    ++++  + G ++EA  +    P K     W  ++  
Sbjct: 446 MSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTA 497



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 6/204 (2%)

Query: 300 EAMELFR--QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
           EAMELF   +L      V G    +++        +   K++  Y        D  V N 
Sbjct: 98  EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++ +++KCGL+ +A +LF+EMP K++ +W  +I G+   G   EA GLF  M  +  +  
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSC-IVDSLGRAGRLDEAKNL 476
              +  ++ A +  GLV+  ++  S  C  KR        SC ++D   + G +++A  +
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQIHS--CALKRGVGDDTFVSCALIDMYSKCGSIEDAHCV 275

Query: 477 IESMPVKPSIAIWQTLLSACRVHG 500
            + MP K ++  W +++++  +HG
Sbjct: 276 FDQMPEKTTVG-WNSIIASYALHG 298


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/589 (34%), Positives = 340/589 (57%), Gaps = 3/589 (0%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           +++ ++  L+  L  CS    L  G Q+H  +++     D+   N LID Y KCG +   
Sbjct: 238 NVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAG 297

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            A+FD++  +N++SWT ++ G++QN      + L  +M     KP+E+  S+ + + G +
Sbjct: 298 KALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV 357

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
            ++++G QIH   +K   E +  V N++IDMYSKC  +++A R+FDV+   S++ +NAMI
Sbjct: 358 DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMI 417

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            GY   GY    L +F++M+     P   TF S L    +L  +    QIHG +I  GF 
Sbjct: 418 EGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGF- 476

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            S+    + +L+D Y KC C+ +AR VF+    K ++ W+SL  GY  +    EA +L+ 
Sbjct: 477 -SLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYS 535

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            L+    + + F  +++    +  A +  G+Q H    K+    D  ++N++VDMY KCG
Sbjct: 536 DLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCG 595

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
            ++EA ++F+    K+   W  +I+ Y +HG  +EA+ +F  M+ +++ P+ V +++VLS
Sbjct: 596 SVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLS 655

Query: 427 ACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSI 486
           ACSH G VE+  ++++ +     ++P IEHY+ +V  LGRAGRL EA+  IE M ++P+ 
Sbjct: 656 ACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAA 714

Query: 487 AIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            +W++LLSACRV G++EL +   E+ + +D  +  +YVM+SNI A  G W + +RLR   
Sbjct: 715 LVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKM 774

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
              G+ K  G+SW+EV+ E+H F   D  H  T+ I+  L E+  +MK+
Sbjct: 775 DVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKD 823



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/519 (29%), Positives = 280/519 (53%), Gaps = 14/519 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  +R C +    + G Q+H  ++K GF  D+ +   L+ +YAK GE++ A  VFD ++
Sbjct: 145 LASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLV 204

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +  V+WTA++ G+ ++G ++  L LF  M  S+V P+++ LS+ + A  VL  ++ G Q
Sbjct: 205 LKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQ 264

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH   ++S  + +    N +ID Y+KCGR+     +FD +  K++I+W  MIAGY+   Y
Sbjct: 265 IHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSY 324

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + L  +M   G  PDE+  +S L +CGS+ ++  G QIH ++I     +     + 
Sbjct: 325 DWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHD--NFVT 382

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KC  L +A+RVFD++   SV+ ++++I GY+++  L  A+E+F+++R + + 
Sbjct: 383 NALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVS 442

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
                  S++G+ A    ++  KQIH    K    LD   S++++D+Y KC  I +A  +
Sbjct: 443 PSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYV 502

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F     K++V W  + +GY     ++EA  L+  + L    P+   + A+ +A S    +
Sbjct: 503 FEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASL 562

Query: 435 EESQEYFSRLCNDKRMKPRIEH----YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
              Q++     +++ MK  +E      + +VD   + G ++EA+ +  S  V    A W 
Sbjct: 563 PHGQQF-----HNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS-SVWKDTACWN 616

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNI 529
           +++S    HG +E    + E ++  +  NP NYV   ++
Sbjct: 617 SMISMYAQHGKVEEALRMFETMVS-NNINP-NYVTFVSV 653



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 267/504 (52%), Gaps = 15/504 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA+ L     N  + Y  ++H  +V  G  +D+ L+N L+  Y K G +  A  +FDKM 
Sbjct: 43  LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGM 133
            RN+VSW++++  + Q G  +  L  F +   + V K NE+ L++ I+A       E G 
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGS 162

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           Q+H   +KSGF  +  VG S++ +Y+K G I++A  +FD +  K+ +TW A+I GY  +G
Sbjct: 163 QVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSG 222

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
            S+  L LF  M E   IPD++  +S L AC  LG + GG QIH +++ S     V T  
Sbjct: 223 RSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY- 281

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
              L+DFY KCG +   + +FD ++ K++ISW+++I GY Q     EA+EL  ++     
Sbjct: 282 -NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGW 340

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
           + D +  SS++        ++ G+QIH+Y  KV    D  V+N+++DMY KC  +D+A  
Sbjct: 341 KPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKR 400

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           +F+ +   +VV +  +I GY + G    A+ +F++M L  V P  + ++++L   +    
Sbjct: 401 VFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLC 460

Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
           ++ S++    +        +    S ++D   +   + +A+ + E    K  I +W +L 
Sbjct: 461 LQLSKQIHGLIIKYGFSLDKFTS-SALIDVYSKCSCIRDARYVFEGTTNK-DIVVWNSLF 518

Query: 494 S----------ACRVHGDLELGRE 507
           S          A +++ DL+L RE
Sbjct: 519 SGYNLQLKSEEAFKLYSDLQLSRE 542



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 215/409 (52%), Gaps = 26/409 (6%)

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLST-NIKASG------VLSSVENG-----MQ 134
            +L   + ++C   F    S +V+P   + S+ N+K  G      +L+ V N       +
Sbjct: 4   AYLPTTSTRSCK--FFSSISPNVQPMLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRK 61

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +  G +++  + N ++  Y K G + +A  +FD MP ++L++W+++++ Y   GY
Sbjct: 62  VHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGY 121

Query: 195 SDKGLLLFRKMQEHG-EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           ++K LL F + Q    +  +E+   S ++AC        G+Q+H ++I SGF   V   +
Sbjct: 122 NEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDV--YV 179

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             SLV  Y K G + +AR VFD +  K+ ++W+++I GY +      +++LF  + E ++
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
             D +VLSS++   +    ++ GKQIHAY  +  + +D S  N ++D Y KCG +     
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKA 299

Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           LF+ + VKN+++WT +I GY ++    EAV L  +M     +PD  A  +VL++C     
Sbjct: 300 LFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDA 359

Query: 434 VEESQEYFSRLCNDKRMKPRIEH----YSCIVDSLGRAGRLDEAKNLIE 478
           ++  ++  S +     +K  +EH     + ++D   +   LD+AK + +
Sbjct: 360 LQHGRQIHSYV-----IKVCLEHDNFVTNALIDMYSKCNALDDAKRVFD 403


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/567 (34%), Positives = 325/567 (57%), Gaps = 2/567 (0%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           +G Q H   +KM   +D+ + + L++MY K G +  A  VFD+M ERN V+W  ++ G+ 
Sbjct: 129 FGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYA 188

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
               A     +F  M       NEF  ++ + A  V   V++G QIH + +K+G      
Sbjct: 189 IQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLS 248

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           + N+++ MY+KCG ++++ ++F++   K+ ITW+AMI GY  +G S K L LF +M   G
Sbjct: 249 ILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAG 308

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P EFT    L AC    +V  G Q+H +L+  GF    +  I  +LVD Y K G   +
Sbjct: 309 INPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGF--ESQLYIMTALVDMYAKSGVTED 366

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           AR+ F+ ++Q  ++ W+S+I GY Q     +A+ L+ +++   +  +   ++S++   ++
Sbjct: 367 ARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSN 426

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
            A  +QG+QIHA   K   GL+ ++ +++  MY KCG ++E   +F  MP +++++W  +
Sbjct: 427 LAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAM 486

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
           I+G  ++G  KEA+ LF +M   D +PD V ++ VLSACSH GLV+    YF  + ++  
Sbjct: 487 ISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFG 546

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
           + P++EHY+C+VD L RAG+L EAK  IES  +   + +W+ LL ACR + + ELG   G
Sbjct: 547 LLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAG 606

Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
           E L+ L       YV++S I+   G   + ER+R + + +G+ K  G SW+E+   +H F
Sbjct: 607 EKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVF 666

Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEE 596
             GD  HP   +I   ++ + K+MK+E
Sbjct: 667 VVGDQMHPCIGEIRTEILRLSKQMKDE 693



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 257/488 (52%), Gaps = 10/488 (2%)

Query: 28  LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           L  G  LH  ++K+  S   + L N LI+ YAKC  +  A  VFD++  ++V+SW  L+ 
Sbjct: 23  LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLIN 82

Query: 87  GFLQNGNAKA--CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF 144
           G+ Q G   +   + LF +M + ++ PN  T S    A+  LSS+  G Q H + +K   
Sbjct: 83  GYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMAC 142

Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
            ++  VG+S+++MY K G + EA  +FD MP ++ +TW  MI+GY +   + +   +F  
Sbjct: 143 FYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFEL 202

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M+   E  +EF FTS L A      V  G QIH   + +G    V   I  +LV  Y KC
Sbjct: 203 MRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLL--VFLSILNALVTMYAKC 260

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L ++ +VF++   K+ I+WS++I GYAQ  +  +A++LF ++    +    F L  ++
Sbjct: 261 GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVL 320

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
              +D   VE+GKQ+H Y  K+       +  ++VDMY K G+ ++A + FN +   ++V
Sbjct: 321 NACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLV 380

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
            WT +I GY ++G  ++A+ L+ +M ++ + P+ +   +VL ACS+    ++ ++  +R 
Sbjct: 381 LWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440

Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
                +   +   S +     + G L+E   +   MP +  I+ W  ++S    +G    
Sbjct: 441 IK-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS-WNAMISGLSQNG---Y 495

Query: 505 GREVGEIL 512
           G+E  E+ 
Sbjct: 496 GKEALELF 503



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 173/310 (55%), Gaps = 2/310 (0%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
            +D G Q+H   VK G    L + N L+ MYAKCG ++ +  VF+   ++N ++W+A++ 
Sbjct: 227 FVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMIT 286

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
           G+ Q+G++   L LF +M  + + P+EFTL   + A     +VE G Q+H   +K GFE 
Sbjct: 287 GYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFES 346

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
              +  +++DMY+K G   +A + F+ +    L+ W +MIAGYV  G ++  L L+ +MQ
Sbjct: 347 QLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQ 406

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G +P+E T  S LKAC +L +   G QIH   I  G    ++  I  +L   Y KCG 
Sbjct: 407 MEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGL--GLEVTIGSALSTMYAKCGN 464

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L E   VF  + ++ +ISW+++I G +Q     EA+ELF ++R++  + D     +++  
Sbjct: 465 LEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524

Query: 327 FADFALVEQG 336
            +   LV+ G
Sbjct: 525 CSHMGLVDSG 534



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 154/282 (54%), Gaps = 5/282 (1%)

Query: 2   NRVSFSLVSERQ-RLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +R+ F+ ++  +  L   L  CS    ++ G Q+H  L+K+GF   L +   L+DMYAK 
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G    A   F+ + + ++V WT+++ G++QNG  +  LSL+C+M    + PNE T+++ +
Sbjct: 362 GVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVL 421

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA   L++ + G QIH   +K G      +G+++  MY+KCG + E   +F  MP + +I
Sbjct: 422 KACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDII 481

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +WNAMI+G    GY  + L LF +M++    PD+ TF + L AC  +G V  G  ++  +
Sbjct: 482 SWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG-WLYFRM 540

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
           +   F    K      +VD   + G L EA+   + IE  ++
Sbjct: 541 MFDEFGLLPKVEHYACMVDVLSRAGKLYEAK---EFIESTTI 579


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/629 (34%), Positives = 358/629 (56%), Gaps = 22/629 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGE--MNGACAVFDKMLE 75
           +R CS +  +  G  + G L+K G F  D+ +   LIDM+ K GE     A  VFDKM E
Sbjct: 173 IRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE 231

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            NVV+WT ++   +Q G  +  +  F  M  S  + ++FTLS+   A   L ++  G Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVL- 191
           H   ++SG   +  V  S++DMY+KC   G +++  ++FD M   S+++W A+I GY+  
Sbjct: 292 HSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN 349

Query: 192 AGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              + + + LF +M   G + P+ FTF+S  KACG++     G Q+ G     G   +  
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGL--ASN 407

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + ++ S++  +VKC  + +AR  F+ + +K+++S+++ + G  +  +   A EL  ++ E
Sbjct: 408 SSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAE 467

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           R L V  F  +S++   A+   + +G+QIH+   K+    +  V N+++ MY KCG ID 
Sbjct: 468 RELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A+ +F+ M  +NV++WT +ITG+ KHG A+  +  F +M  + V+P+ V Y+A+LSACSH
Sbjct: 528 ASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSH 587

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            GLV E   +F+ +  D ++KP++EHY+C+VD L RAG L +A   I +MP +  + +W+
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           T L ACRVH + ELG+     +L  D + P  Y+ +SNI+A AG W E   +R+  + + 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERN 707

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--ELGFVYGVKYALH 608
           L K  G SW+EV  ++H FY GD +HP     HQ+  E++  + E    G+V      LH
Sbjct: 708 LVKEGGCSWIEVGDKVHKFYVGDTSHP---NAHQIYDELDWLITEIKRCGYVPDTDLVLH 764

Query: 609 DIQEESKEES----LRVHSEKLAIGLALV 633
            ++EE  E      L  HSEK+A+   L+
Sbjct: 765 KLEEEDDEAKKEMLLYQHSEKIAVAFGLI 793



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 247/501 (49%), Gaps = 28/501 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML---E 75
           L+ C +      G  +H  L++     D +L N LI +Y+K G++  A  VF+ M    +
Sbjct: 69  LKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGK 128

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           R+VVSW+A+M  F  NG     + LF +     + PN++  +  I+A      V  G  I
Sbjct: 129 RDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVI 188

Query: 136 HGMCMKSG-FEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
            G  MK+G FE +  VG S+IDM+ K       A ++FD M   +++TW  MI   +  G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  + +  F  M   G   D+FT +S   AC  L ++  G Q+H + I SG    V+   
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC-- 306

Query: 254 AGSLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQL- 308
             SLVD Y KC   G + + R+VFD ++  SV+SW++LI GY Q  NLA EA+ LF ++ 
Sbjct: 307 --SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMI 364

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  ++ + F  SS      + +    GKQ+  +A K     ++SVSNS++ M++KC  +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRM 424

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
           ++A   F  +  KN+V++   + G  ++   + A  L  ++   ++      + ++LS  
Sbjct: 425 EDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGV 484

Query: 429 SHSGLVEESQEYFSRL------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
           ++ G + + ++  S++      CN       I  YS       + G +D A  +   M  
Sbjct: 485 ANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYS-------KCGSIDTASRVFSLMDN 537

Query: 483 KPSIAIWQTLLSACRVHGDLE 503
           +  I+ W ++++    HG  E
Sbjct: 538 RNVIS-WTSMITGFAKHGFAE 557



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 222/439 (50%), Gaps = 16/439 (3%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---GEMNGA 66
           S++  L+     C++   L  G QLH   ++ G + D+  +  L+DMYAKC   G ++  
Sbjct: 267 SDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVECS--LVDMYAKCSADGSVDDC 324

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGN-AKACLSLFCQMGSSS-VKPNEFTLSTNIKASG 124
             VFD+M + +V+SWTAL+ G++QN N A   ++LF +M +   V+PN FT S+  KA G
Sbjct: 325 RKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            +S    G Q+ G   K G   N  V NS+I M+ KC R+ +A   F+ +  K+L+++N 
Sbjct: 385 NVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNT 444

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
            + G       +    L  ++ E       FTF S L    ++GS+  G QIH  ++  G
Sbjct: 445 FLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLG 504

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
              S    +  +L+  Y KCG +  A RVF L++ ++VISW+S+I G+A+       +E 
Sbjct: 505 L--SCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLET 562

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMY 362
           F Q+ +  ++ +     +++   +   LV +G + H  +      +   + +   +VD+ 
Sbjct: 563 FNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWR-HFNSMYEDHKIKPKMEHYACMVDLL 621

Query: 363 LKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVA 420
            + GL+ +A E  N MP + +V+ W   +     H   +      RK+L  D  EP   A
Sbjct: 622 CRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEP--AA 679

Query: 421 YLAVLSACSHSGLVEESQE 439
           Y+ + +  + +G  EES E
Sbjct: 680 YIQLSNIYASAGKWEESTE 698



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 187/355 (52%), Gaps = 13/355 (3%)

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           L+   L  G+ +  +S    M    ++P +  T S+ +K+         G  +H   ++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVLAGYSDKGL 199
             E + V+ NS+I +YSK G + +A  +F+ M     + +++W+AM+A +   G     +
Sbjct: 92  EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
            LF +  E G +P+++ +T+ ++AC +   VG G  I GFL+ +G  +     +  SL+D
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGH-FESDVCVGCSLID 210

Query: 260 FYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
            +VK     E A +VFD + + +V++W+ +I    Q     EA+  F  +     + D F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELF 375
            LSS+    A+   +  G+Q+H++A +  SGL   V  S+VDMY KC   G +D+  ++F
Sbjct: 271 TLSSVFSACAELENLSLGRQLHSWAIR--SGLADDVECSLVDMYAKCSADGSVDDCRKVF 328

Query: 376 NEMPVKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSAC 428
           + M   +V++WT +ITGY ++  LA EA+ LF +M+    VEP+   + +   AC
Sbjct: 329 DRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383


>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
          Length = 608

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/594 (35%), Positives = 327/594 (55%), Gaps = 40/594 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           ++H   +K G    P     ++  Y++   + +A R FD  P + L  ++A++A    + 
Sbjct: 22  RVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSS 81

Query: 194 YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             +  L L R+M     + PD F   S   A G L S+  G Q+H     S  PYS   V
Sbjct: 82  DPELVLPLLRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAAS--PYSADNV 139

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR------ 306
           +  SL+D Y KCG   +AR+VFD I  K+ + W++LI GYA      EA++LF+      
Sbjct: 140 VKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHG 199

Query: 307 -------------------------QLRERSLQV-DGFVLSSMMGVFADFALVEQGKQIH 340
                                    ++R   +++ D FVL++++G  AD A +  G+Q+H
Sbjct: 200 LFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLH 259

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
            +  ++       V N++VDMY KC  I  A E+F  + V++V++WT I+ G  +HG A+
Sbjct: 260 GFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHGRAE 319

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           E   L+ +MLL  ++P+ V ++ ++ ACSH+GLV++ ++ F  +  +  MKP ++HY+C 
Sbjct: 320 EVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCY 379

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D L R+G L EA+ LI +MP +P  A W  LLSAC+ H D ++   V + LL L   +P
Sbjct: 380 LDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDP 439

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             Y+++SN++A    W+   ++RK+     ++KV G SWVE  +E   F+ G+    + E
Sbjct: 440 STYILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGE 499

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           +I   L E+   M++  G+V      +HD++E  KE+ L VHSE+LA+      G L   
Sbjct: 500 EITCFLEELVSEMRKR-GYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAF----GILKSP 554

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           PG VIRV KNLRVCGDCH  +K +S I +   +VRDA+RFH FE G CSC ++W
Sbjct: 555 PGSVIRVVKNLRVCGDCHTVMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 32/241 (13%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV-------- 79
           L  G QLH       +S D ++ + LIDMY KCG    A  VFD +  +N V        
Sbjct: 119 LRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISG 178

Query: 80  -----------------------SWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE-FT 115
                                  +WTAL+ GF++ GN    + LF +M    ++ ++ F 
Sbjct: 179 YASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFV 238

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           L+T I  +  L+++  G Q+HG  M+ GF  + +VGN+++DMYSKC  I+ A  +F+ + 
Sbjct: 239 LATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGIT 298

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            + +I+W  ++ G    G +++   L+ +M   G  P+E TF   + AC   G V  G Q
Sbjct: 299 VRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQ 358

Query: 236 I 236
           +
Sbjct: 359 L 359



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 4/161 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG ++++GF   +++ N L+DMY+KC +++ A  VF+ +  R+V+SWT ++ G  Q
Sbjct: 255 GRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQ 314

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G A+   +L+ +M  + +KPNE T    I A      V+ G Q+    MK  +   P V
Sbjct: 315 HGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFD-SMKREYGMKPGV 373

Query: 151 GNSI--IDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAG 188
            +    +D+ S+ G ++EA ++   MP +    TW A+++ 
Sbjct: 374 QHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSA 414


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/669 (32%), Positives = 341/669 (50%), Gaps = 42/669 (6%)

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G+   A  +FD + + +  + + L+  F   G     + L+  + +  +KP+     T  
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
           KA G         ++H   ++ G   +  +GN++I  Y KC  +  A R+FD +  K ++
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W +M + YV  G    GL +F +M  +G  P+  T +S L AC  L  +  G  IHGF 
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +  G   +V   +  +LV  Y +C  + +AR VFDL+  + V+SW+ ++  Y       +
Sbjct: 260 VRHGMIENV--FVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDK 317

Query: 301 AMELFRQLRERSLQVD------------------------------GF-----VLSSMMG 325
            + LF Q+  + ++ D                              GF      +SS + 
Sbjct: 318 GLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLP 377

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +    +  GK++H Y  +     D +   ++V MY KCG ++ +  +F+ +  K+VV 
Sbjct: 378 ACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVA 437

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I     HG  +E + LF  ML   ++P+ V +  VLS CSHS LVEE  + F+ + 
Sbjct: 438 WNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMG 497

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
            D  ++P   HY+C+VD   RAGRL EA   I+ MP++P+ + W  LL ACRV+ ++EL 
Sbjct: 498 RDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELA 557

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           +     L  ++ +NP NYV + NI   A  W+E    R L + +G+ K  G SW++V   
Sbjct: 558 KISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDR 617

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  +  ++KI+  L E+ ++MK   G+     Y L DI +E K ESL  HSEK
Sbjct: 618 VHTFVVGDKNNMESDKIYNFLDELGEKMKSA-GYKPDTDYVLQDIDQEEKAESLCSHSEK 676

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+   ++   LN Q    IRVFKNLR+CGDCH  IK +SK++ +  +VRD+ RFH F  
Sbjct: 677 LAVAFGIL--NLNGQSS--IRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRN 732

Query: 686 GVCSCGDYW 694
           G CSC D W
Sbjct: 733 GNCSCQDLW 741



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 219/449 (48%), Gaps = 50/449 (11%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   ++ G   D  L N LI  Y KC  + GA  VFD ++ ++VVSWT++   ++  G
Sbjct: 153 EVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCG 212

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
             +  L++FC+MG + VKPN  TLS+ + A   L  +++G  IHG  ++ G   N  V +
Sbjct: 213 LPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCS 272

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF---------- 202
           +++ +Y++C  + +A  +FD+MP + +++WN ++  Y      DKGL LF          
Sbjct: 273 ALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEA 332

Query: 203 -------------------------RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
                                    RKMQ  G  P++ T +S L AC  L S+  G ++H
Sbjct: 333 DEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVH 392

Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEEN 297
            ++        + T+ A  LV  Y KCG L  +R VFD+I +K V++W+++I+  A   N
Sbjct: 393 CYVFRHWLIGDLTTMTA--LVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGN 450

Query: 298 LAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQI-HAYAAKVPSGLDTSVSN 356
             E + LF  + +  ++ +    + ++   +   LVE+G QI ++         D +   
Sbjct: 451 GREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYA 510

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITG---YGKHGLAK-EAVGLFRKMLL 411
            +VD++ + G + EA E    MP++   + W  ++     Y    LAK  A  LF     
Sbjct: 511 CMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLF----- 565

Query: 412 DDVEPDGVA-YLAVLSACSHSGLVEESQE 439
            ++EP+    Y+++ +    + L  E+ E
Sbjct: 566 -EIEPNNPGNYVSLFNILVTAKLWSEASE 593



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 35/257 (13%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS+   L  G  +HG  V+ G   ++ + + L+ +YA+C  +  A  VFD M 
Sbjct: 236 LSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP 295

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV------------------------- 109
            R+VVSW  ++  +  N      L+LF QM S  V                         
Sbjct: 296 HRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355

Query: 110 ----------KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
                     KPN+ T+S+ + A  +L S+  G ++H    +     +     +++ MY+
Sbjct: 356 MLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYA 415

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           KCG +N +  +FD++  K ++ WN MI    + G   + LLLF  M + G  P+  TFT 
Sbjct: 416 KCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTG 475

Query: 220 TLKACGSLGSVGGGTQI 236
            L  C     V  G QI
Sbjct: 476 VLSGCSHSRLVEEGLQI 492



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 2/172 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  CS    L  G ++H  + +     DL     L+ MYAKCG++N +  VFD +  ++V
Sbjct: 376 LPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDV 435

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
           V+W  ++     +GN +  L LF  M  S +KPN  T +  +        VE G+QI + 
Sbjct: 436 VAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNS 495

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
           M      E +      ++D++S+ GR++EA      MP +   + W A++  
Sbjct: 496 MGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGA 547



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 8/211 (3%)

Query: 297 NLAEAMELFRQL---RERSLQVDGFVLSSMMGVFADFALVEQGKQIHA--YAAKVPSGLD 351
           N+A ++ +   L     R L + GFVL     +          KQ+ +   A  VP+ + 
Sbjct: 6   NVATSLTVMITLEIDHSRELIIFGFVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIP 65

Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
           + +   ++   L  G    A +LF+ +P  +  T + +I+ +   GL  EA+ L+  +  
Sbjct: 66  SHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRA 125

Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
             ++P    +L V  AC  SG     +E          M       + ++ + G+   ++
Sbjct: 126 RGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLG-NALIHAYGKCKCVE 184

Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            A+ + + + VK  ++ W T +S+C V+  L
Sbjct: 185 GARRVFDDLVVKDVVS-W-TSMSSCYVNCGL 213


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/675 (32%), Positives = 360/675 (53%), Gaps = 27/675 (4%)

Query: 23  SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           S  L L YG  LH  L+  G   +L+L   ++DMY+KC  M  A  V +   E +V  WT
Sbjct: 229 SSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWT 288

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
            L+ GF QN   +  +S+F  M  S + PN FT S+ + AS  + S++ G Q H   +  
Sbjct: 289 TLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIV 348

Query: 143 GFEWNPVVGNSIIDMYSKCGRIN-EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           G E +  +GN+++DMY KC  I   A ++F  + + +++ W ++IAG+      D    L
Sbjct: 349 GLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLED-SFQL 407

Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
           F +MQ  G  P+ FT ++ L AC    S+     +HG +I +     +   +A +LVD Y
Sbjct: 408 FAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKT--KVDIDIAVANALVDTY 465

Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
              G + EA  V   +  +  I+++ L     Q+ +   A+++   +    +++D F L+
Sbjct: 466 AGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLA 525

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
           S +   A    +E GKQ+H Y+ K       SVSNS+V +Y KCG I +A   F ++   
Sbjct: 526 SFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEP 585

Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           +  +W  +I+G+  +GL   A+  F  M L  V+PD +  L+++SACSH GL+E   EYF
Sbjct: 586 DAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYF 645

Query: 442 SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD 501
             +  +  + P+++HY C+VD LGR GRL+EA  +IE M  KP   I +TLL+AC +HG+
Sbjct: 646 HSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGN 705

Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           + LG ++    L LD  +P  Y++++N++ +AG  +  E+ R+L R +GL++  G+ W+E
Sbjct: 706 VALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWME 765

Query: 562 VDKEIHFFYGGDDTH--PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           +   +H F  G+  +   +TEK+  ++ E   R           +Y     Q +  E+  
Sbjct: 766 IRSRVHHFSAGEKINEDEITEKLEFLITEFRNR-----------RY-----QYQENEDKF 809

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             H E+LA+      G LN      IR++KN  +C  CH FI   ++++    ++RD  R
Sbjct: 810 -YHPEQLAVAF----GVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKR 864

Query: 680 FHRFEGGVCSCGDYW 694
           FH F+ G CSC D +
Sbjct: 865 FHFFKDGQCSCRDIF 879



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 252/486 (51%), Gaps = 8/486 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           +FSL   ++     L  C+ N L + G+ +H  ++K+G   DL L N+L+ +YAK   ++
Sbjct: 8   TFSLSRFQETCLRVLSFCNSNSLKE-GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVH 66

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +FD+M  R+VVSWT ++    +  +    L LF  M  S   PNEFTLS+ +++  
Sbjct: 67  RARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCF 126

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN-EAARMFD-VMPAKSLITW 182
            L   E GMQIH   +K G E N  VG S+++ Y+KCG  + EA ++   V     +++W
Sbjct: 127 ALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSW 186

Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
             M++  V  G   +   ++ KM E G  P+EFTF   L A  S   +  G  +H  LI 
Sbjct: 187 TTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIM 246

Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
             F   +  V+  ++VD Y KC  +V+A +V +L  +  V  W++LI G+ Q   + EA+
Sbjct: 247 --FGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAI 304

Query: 303 ELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
            +FR +    L  + F  SS++   +    ++ G+Q H+    V    D  + N++VDMY
Sbjct: 305 SVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMY 364

Query: 363 LKCGLI-DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           +KC  I   A ++F E+   NV+ WT +I G+ +  L +++  LF +M    V P+    
Sbjct: 365 MKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTM 423

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
            A+L ACS +  +  +      +   K +   I   + +VD+    G +DEA ++I +M 
Sbjct: 424 SAILGACSKTRSLVPTMMLHGHIIKTK-VDIDIAVANALVDTYAGVGMIDEAWSVIGTMN 482

Query: 482 VKPSIA 487
           ++ SI 
Sbjct: 483 LRDSIT 488


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/510 (38%), Positives = 302/510 (59%), Gaps = 9/510 (1%)

Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
           +GY+    +   + ++ +M      P++FT+   ++AC    ++  G QIH  ++  GF 
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGF- 125

Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK--SVISWSSLILGYAQEENLAEAMEL 304
                    +L+  YV    L +ARRVFD + Q+  + +SW+++I  Y Q   L EA  L
Sbjct: 126 -GADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFAL 184

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++R  ++ +D FV +SM+        +EQGK IH Y  K    LD+ ++ +++DMY K
Sbjct: 185 FDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCK 244

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           CG +++A+E+FNE+P K + +W  +I G   HG  + A+ LF++M  + V PDG+ ++ V
Sbjct: 245 CGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV 304

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSAC+HSGLVEE + YF  +     +KP +EH+ C+VD LGRAG L+EA+ LI  MPV P
Sbjct: 305 LSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNP 364

Query: 485 SIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRK 544
              +   L+ ACR+HG+ ELG ++G+ ++ L+  N   YV+++N++A AG W +  ++RK
Sbjct: 365 DAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRK 424

Query: 545 LARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVK 604
           L   +G+KK  G S +E +  +  F  G   HP  ++I+  L E+ + ++  +G+V    
Sbjct: 425 LMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIR-SIGYVPDTD 483

Query: 605 YALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
             LHDI EE KE  L  HSEKLAI   L    L  +PG+ +R+ KNLR+C DCH+  K +
Sbjct: 484 GVLHDIDEEEKENPLYYHSEKLAIAFGL----LKTKPGETLRISKNLRICRDCHQASKLI 539

Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           SK+     ++RD  RFH F  G CSC DYW
Sbjct: 540 SKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 208/424 (49%), Gaps = 34/424 (8%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q H  ++++G S D    ND +      G +   CA+                 G+L+  
Sbjct: 38  QYHSQIIRLGLSAD----NDAM------GRVIKFCAISKS--------------GYLRWQ 73

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            A+ C+ ++ +M   SV PN+FT    I+A  +  ++E G QIH   +K GF  +    N
Sbjct: 74  LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLN 133

Query: 153 SIIDMYSKCGRINEAARMFDVMPA--KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           ++I MY     + +A R+FD MP   ++ ++WNAMIA YV +    +   LF +M+    
Sbjct: 134 NLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 193

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
           + D+F   S L AC  LG++  G  IHG++  SG     K  +A +++D Y KCGCL +A
Sbjct: 194 VLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSK--LATTVIDMYCKCGCLEKA 251

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
             VF+ + QK + SW+ +I G A       A+ELF+++    +  DG    +++   A  
Sbjct: 252 SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHS 311

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
            LVE+GK    Y  +V  GL   + +   +VD+  + GL++EA +L NEMPV        
Sbjct: 312 GLVEEGKHYFQYMTEV-LGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLG 370

Query: 389 IITGYGK-HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            + G  + HG  +    + +K++  ++EP       +L+    S    E      +L ND
Sbjct: 371 ALVGACRIHGNTELGEQIGKKVI--ELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMND 428

Query: 448 KRMK 451
           + +K
Sbjct: 429 RGVK 432



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 3/259 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-- 76
           +R C  +  ++ G Q+H  ++K GF  D    N+LI MY     +  A  VFD M +R  
Sbjct: 101 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDR 160

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N VSW A++  ++Q+       +LF +M   +V  ++F  ++ + A   L ++E G  IH
Sbjct: 161 NSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIH 220

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
           G   KSG E +  +  ++IDMY KCG + +A+ +F+ +P K + +WN MI G  + G  +
Sbjct: 221 GYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE 280

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
             + LF++M+     PD  TF + L AC   G V  G     ++ T            G 
Sbjct: 281 AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYM-TEVLGLKPGMEHFGC 339

Query: 257 LVDFYVKCGCLVEARRVFD 275
           +VD   + G L EAR++ +
Sbjct: 340 MVDLLGRAGLLEEARKLIN 358



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L  C+    L+ G  +HG + K G   D  L   +IDMY KCG +  A  VF+++ +
Sbjct: 201 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 260

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ- 134
           + + SW  ++ G   +G  +A + LF +M    V P+  T    + A      VE G   
Sbjct: 261 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 320

Query: 135 ----IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                  + +K G E        ++D+  + G + EA ++ + MP
Sbjct: 321 FQYMTEVLGLKPGMEHF----GCMVDLLGRAGLLEEARKLINEMP 361


>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/550 (37%), Positives = 327/550 (59%), Gaps = 17/550 (3%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMF-----DVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           NP +   +I ++S CGR++EA R+F     DV   +S+  W AM  GY   GY  + LLL
Sbjct: 107 NPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESV--WVAMGIGYSRNGYPKEALLL 164

Query: 202 FRKMQ-EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           + +M  + G++ + F F+  LKAC  LG +  G  +H  ++ +        V+  +L+  
Sbjct: 165 YYEMVCQFGQLGN-FAFSMALKACSDLGDLRTGRAVHAQVLKA--TEDPDQVVNNALLRL 221

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y + GC  EA R+FD +  ++++SW+SLI G  ++E + EA+E FR ++ + +      L
Sbjct: 222 YSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTL 281

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
           ++++ V A    +  GK+IHA   K  +  D  V NS+VDMY KCG +D    +FN M  
Sbjct: 282 TTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQG 341

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           K++ +W  +ITGY  +G   EA+  F++M+     PDG+ ++A+LS CSH+GL ++    
Sbjct: 342 KDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRL 401

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +  D  + P +EHY+C+VD LGRAGR+ EA  ++++MP KP+ +IW +LL++CR+HG
Sbjct: 402 FEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHG 461

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           ++ L   V + L  L+ +N  NYVM+SNI+A+AG W   + +R+    +G+ K AG SW+
Sbjct: 462 NVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWL 521

Query: 561 EVDKEIH-FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           ++  +IH F  GG +    + +  +V   + + M EE+G+V      LHD+ EE +   +
Sbjct: 522 QIKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAM-EEVGYVPDTGVVLHDVSEEMRAMWV 580

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSE+LA   AL+    N   G  IR+ KNLRVC DCH ++K LSK+   V V+RD  R
Sbjct: 581 CGHSERLATMFALI----NTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNR 636

Query: 680 FHRFEGGVCS 689
           FH F+ GVCS
Sbjct: 637 FHHFKDGVCS 646



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 172/666 (25%), Positives = 288/666 (43%), Gaps = 87/666 (13%)

Query: 49  LNNDLIDMYAKCGEMNGACAVF-----DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
           L   LI +++ CG ++ A  VF     D  L  +V  W A+  G+ +NG  K  L L+ +
Sbjct: 110 LKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESV--WVAMGIGYSRNGYPKEALLLYYE 167

Query: 104 MGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           M     +   F  S  +KA   L  +  G  +H   +K+  + + VV N+++ +YS+ G 
Sbjct: 168 MVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGC 227

Query: 164 INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKA 223
             EA RMFD MP ++L++WN++IAG V      + +  FR MQ  G      T T+ L  
Sbjct: 228 FEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPV 287

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C  + ++G G +IH  ++ S         +  SLVD Y KCG +   RRVF+ ++ K + 
Sbjct: 288 CARVTALGSGKEIHAVIVKS--TAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLT 345

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW++LI GYA    + EAME F+++       DG    +++   +   L + G ++    
Sbjct: 346 SWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEM- 404

Query: 344 AKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAK 400
            K+  G+  +V +   +VD+  + G I EA E+   MP K   + W  ++     HG   
Sbjct: 405 MKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVP 464

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES----QEYFSRL-------CNDKR 449
            A  + +++   ++EP+      +LS    +  + ES    +E+  +        C+  +
Sbjct: 465 LAEAVAKRLF--ELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQ 522

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE----LG 505
           +K +I  +         AG  +E +N +E   V      W+ L+ A    G +     + 
Sbjct: 523 IKSKIHTFV--------AGGSNEFRNSVEYKKV------WKRLMEAMEEVGYVPDTGVVL 568

Query: 506 REVGE------------------ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
            +V E                   L+      P+       +  D  SW           
Sbjct: 569 HDVSEEMRAMWVCGHSERLATMFALINTASGMPIRITKNLRVCVDCHSW----------- 617

Query: 548 SKGLKKVAGRSWVEVD-KEIHFFYGGDDTHPLTEKIHQVLME------MEKRMKEELGFV 600
            K L KV GR  V  D    H F  G  +      ++++  E      +      +  F 
Sbjct: 618 VKTLSKVTGRVIVLRDTNRFHHFKDGVCSSIQISTVYKIFQENLDGDTVGNPFASKPAFA 677

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
            G++  +  +   S E ++ V    LA   AL+    N   G  IR+ KNL VC DCH +
Sbjct: 678 CGIEQCVCFLPNFSNEGNVDVW---LATMFALI----NTASGMPIRITKNLHVCVDCHSW 730

Query: 661 IKGLSK 666
           +K +SK
Sbjct: 731 VKIVSK 736



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 7/331 (2%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ CS    L  G  +H  ++K     D ++NN L+ +Y++ G    A  +FD M  RN
Sbjct: 183 ALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRN 242

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           +VSW +L+ G ++       +  F  M    +  +  TL+T +     ++++ +G +IH 
Sbjct: 243 LVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHA 302

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +KS  + +  V NS++DMY+KCG ++   R+F+ M  K L +WN +I GY + G   +
Sbjct: 303 VIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTE 362

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGS 256
            +  F++M   G  PD  TF + L  C   G    G ++   + +  G   +V+      
Sbjct: 363 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHY--AC 420

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQV 315
           LVD   + G + EA  +   +  K   S W SL+       N+  A  + ++L E     
Sbjct: 421 LVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNN 480

Query: 316 DG-FVLSSMMGVFADFALVEQGKQIHAYAAK 345
            G +V+ S   ++A+  + E  K +  +  K
Sbjct: 481 AGNYVMLS--NIYANAGMWESVKVVREFMEK 509



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 4/182 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C++   L  G ++H  +VK     D  + N L+DMYAKCG M+    VF+ M 
Sbjct: 281 LTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQ 340

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +++ SW  L+ G+  NG     +  F +M  S   P+  T    +         ++G +
Sbjct: 341 GKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCR 400

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYVL 191
           +  M MK     +P V +   ++D+  + GRI EA  +   MP K   + W +++    L
Sbjct: 401 LFEM-MKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRL 459

Query: 192 AG 193
            G
Sbjct: 460 HG 461


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/549 (38%), Positives = 322/549 (58%), Gaps = 8/549 (1%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I+ Y + G +  A ++FD MP + L TWNAMIAG +   Y+++GL LFR+M 
Sbjct: 24  NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PDE+T  S       L SV  G QIHG+ I  G    +  V+  SL   Y++ G 
Sbjct: 84  GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGL--ELDLVVNSSLAHMYMRNGK 141

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L +   V   +  +++++W++LI+G AQ       + L++ ++    + +     +++  
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            +D A+  QG+QIHA A K+ +    +V +S++ MY KCG + +A + F+E   ++ V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           + +I+ YG HG   EA+ LF  M    ++E + VA+L +L ACSHSGL ++  E F  + 
Sbjct: 262 SSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
                KP ++HY+C+VD LGRAG LD+A+ +I+SMP+KP   IW+TLLSAC +H + E+ 
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMA 381

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           ++V + +L +D ++   YV+++N+HA A  W +   +RK  R K +KK AG SW E   E
Sbjct: 382 QKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 441

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD +   +++I+  L E+   MK + G+       LHD+ EE KE  L  HSEK
Sbjct: 442 VHQFKMGDRSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMDEEEKESDLVQHSEK 500

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+  AL+   L E  G  IR+ KNLRVC DCH   K +S I+     +RD +RFH F  
Sbjct: 501 LAVAFALMI--LPE--GAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFIN 556

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 557 GKCSCGDYW 565



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 199/388 (51%), Gaps = 15/388 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           + M +N LI+ Y + G++  A  VFD+M +R + +W A++ G +Q    +  LSLF +M 
Sbjct: 24  NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                P+E+TL +    S  L SV  G QIHG  +K G E + VV +S+  MY + G++ 
Sbjct: 84  GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQ 143

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           +   +   MP ++L+ WN +I G    G  +  L L++ M+  G  P++ TF + L +C 
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L   G G QIH   I  G   S    +  SL+  Y KCGCL +A + F   E +  + W
Sbjct: 204 DLAIRGQGQQIHAEAIKIGA--SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261

Query: 286 SSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQ-----I 339
           SS+I  Y       EA++LF  + E++ ++V+     +++   +   L ++G +     +
Sbjct: 262 SSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 340 HAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGL 398
             Y  K   GL       +VD+  + G +D+A  +   MP+K + V W  +++    H  
Sbjct: 322 EKYGFK--PGLKHYT--CVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKN 377

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           A+ A  +F+++L  +++P+  A   +L+
Sbjct: 378 AEMAQKVFKEIL--EIDPNDSACYVLLA 403



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 5/283 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G Q+HG  +K G   DL++N+ L  MY + G++     V   M  RN+V+W  L+ G  Q
Sbjct: 110 GQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 169

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  L L+  M  S  +PN+ T  T + +   L+    G QIH   +K G      V
Sbjct: 170 NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAV 229

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S+I MYSKCG + +AA+ F     +  + W++MI+ Y   G  D+ + LF  M E  E
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTE 289

Query: 211 IP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITS-GFPYSVKTVIAGSLVDFYVKCGCLV 268
           +  +E  F + L AC   G    G ++   ++   GF   +K      +VD   + GCL 
Sbjct: 290 MEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC--VVDLLGRAGCLD 347

Query: 269 EARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRE 310
           +A  +   +  K   + W +L+      +N   A ++F+++ E
Sbjct: 348 QAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE 390



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 12/209 (5%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+++F  V         L  CS   +   G Q+H   +K+G S  + + + LI MY+KCG
Sbjct: 191 NKITFVTV---------LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNI 120
            +  A   F +  + + V W++++  +  +G     + LF  M   + ++ NE      +
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLL 301

Query: 121 KASGVLSSVENGMQIHGMCM-KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-S 178
            A       + G+++  M + K GF+        ++D+  + G +++A  +   MP K  
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPD 361

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            + W  +++   +   ++    +F+++ E
Sbjct: 362 PVIWKTLLSACNIHKNAEMAQKVFKEILE 390


>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/574 (36%), Positives = 327/574 (56%), Gaps = 21/574 (3%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-----RINEAARMFDVMPAKSLIT 181
           +S+ +  Q H + +++G   +  +  S++  Y+            + R+FD +   ++  
Sbjct: 66  TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 125

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           WN MI   +      K +LL+ +M      P+++T+ + LKAC   G V  G Q+H  L+
Sbjct: 126 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 185

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             G        I  S +  Y   G LVEARR+ D  ++   +     +    ++    EA
Sbjct: 186 KHGL--GGDGHILSSAIRMYASFGRLVEARRILD--DKGGEVD---AVCMPDRKGCFMEA 238

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           +E+F Q+++  ++   FVL S++   A+   ++QG+ IH YA +    LD  +  S+VDM
Sbjct: 239 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDM 298

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ID A E+F +M  K V +W  +I G   HG A++A+ LF KM   D+ P+ + +
Sbjct: 299 YAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITF 355

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           + VL+AC+H GLV++    F+ +  +  ++P+IEHY CIVD LGRAG L EA+ ++ S+P
Sbjct: 356 VGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP 415

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
            +P+ A+W  LL ACR HG++ELG  VG+ILL L+  N   Y ++SNI+A AG W E   
Sbjct: 416 TEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGE 475

Query: 542 LRKLARSKGLKKVAGRSWVEVDK-EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           +RKL + +G+K   G S +++ + E+H F  GD +HP  + I+Q+L ++++R++ E G+ 
Sbjct: 476 VRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQME-GYE 534

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
                 L DI EE KE ++  HSEKLAIG  L+    N  PG  IR+ KNLRVC DCH  
Sbjct: 535 PDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLI----NTSPGTTIRIVKNLRVCEDCHSA 590

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            K +S++     +VRD  R+H F  G CSC D+W
Sbjct: 591 TKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 21/348 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD-KMLERN 77
           L+ CS   ++  GVQ+H  LVK G   D  + +  I MYA  G +  A  + D K  E +
Sbjct: 165 LKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 224

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V      C   + G     L +F QM    ++P +F L + + A   L +++ G  IH 
Sbjct: 225 AV------CMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHT 278

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              ++  + + V+G S++DMY+KCGRI+ A  +F+ M  K + +WNAMI G  + G ++ 
Sbjct: 279 YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAED 338

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            + LF KM  +   P+E TF   L AC   G V  G  I   +      Y V+  I   G
Sbjct: 339 AIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKE---YGVEPQIEHYG 392

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVIS-WSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +VD   + G L EA +V   I  +   + W +L+    +  N+     + + L E   Q
Sbjct: 393 CIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQ 452

Query: 315 VDG-FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
             G + L S   ++A     E+  ++     +   G+ T+   SI+D+
Sbjct: 453 NSGRYTLLS--NIYAKAGRWEEVGEVRKLMKE--RGIKTTPGTSIIDL 496



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 184/413 (44%), Gaps = 43/413 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCG-----EMNGACAVFDKMLERNVVSWTALMCG 87
           Q H  +++ G   D  +   L+  YA            +  VFD + + NV  W  ++  
Sbjct: 73  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 132

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            ++N      + L+ +M  +  +PN++T    +KA      V  G+Q+H   +K G   +
Sbjct: 133 CIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGD 192

Query: 148 PVVGNSIIDMYSKCGRINEAARMFD---------VMPAKSLITWNAMIAGYVLAGYSDKG 198
             + +S I MY+  GR+ EA R+ D          MP +               G   + 
Sbjct: 193 GHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRK--------------GCFMEA 238

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L +F +MQ+    P +F   S L AC +LG++  G  IH +   +     +  V+  SLV
Sbjct: 239 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSI--QLDGVLGTSLV 296

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A  VF+ +  K V SW+++I G A      +A++LF ++    +  +  
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEI 353

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
               ++   A   LV++G  I     K   G++  + +   IVD+  + GL+ EA ++ +
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRK-EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVS 412

Query: 377 EMPVKNV-VTWTVIITGYGKHGLAK--EAVGLFRKMLLDDVEPDGVAYLAVLS 426
            +P +     W  ++    KHG  +  E VG   K+LL ++EP       +LS
Sbjct: 413 SIPTEPTPAVWGALLGACRKHGNVELGERVG---KILL-ELEPQNSGRYTLLS 461



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G  +H    +     D +L   L+DMYAKCG ++ A  VF+KM 
Sbjct: 257 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 316

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            + V SW A++ G   +G A+  + LF +M    + PNE T    + A      V+ G+ 
Sbjct: 317 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLT 373

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
           I    M+  +   P + +   I+D+  + G + EA ++   +P + +   W A++  
Sbjct: 374 IFN-SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 429


>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Brachypodium distachyon]
          Length = 610

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/594 (35%), Positives = 324/594 (54%), Gaps = 40/594 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           + H   +K G   +P     ++  Y+K   + +   +FD  P + L  +++++A    + 
Sbjct: 24  RAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSE 83

Query: 194 YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
             +  L L R+M     + PD F   S   A   L S+  G Q+HG  + S  PYS   V
Sbjct: 84  SPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVAS--PYSSDDV 141

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
           +  SL+D Y KCG   +AR+VFD I  K+ + W++LI GY       EA+ELFR +  R+
Sbjct: 142 VKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRT 201

Query: 313 LQV--------------------------------DGFVLSSMMGVFADFALVEQGKQIH 340
           L                                  D FVLSS +G  AD A    G+Q+H
Sbjct: 202 LFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLH 261

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           +   ++       V N++VDMY KC  I  A E+F E+  +++++WT ++ G  +HG A+
Sbjct: 262 SLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAE 321

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA  L+ +M+L  V+P+ V ++ ++ ACSH+GLV++ ++ F  +  +  + PR++HY+C 
Sbjct: 322 EAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCY 381

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           +D L R+G L EA+ LI +MP  P  A W +LLSAC+ + + E+   V + LL L    P
Sbjct: 382 LDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYP 441

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             YV++SN++A  G W+  + +RKL     ++K  G SW+EV +E   F+ G+    L E
Sbjct: 442 STYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLRE 501

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ 640
           +I   L E+   M++  G+V      +HD++E  KE  L +HSE+LA+   ++R  L   
Sbjct: 502 EILGFLEELVSEMRQR-GYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPL--- 557

Query: 641 PGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            G VIRV KNLRVC DCH  +K +S+I +   +VRDA+RFH FEGG CSC ++W
Sbjct: 558 -GSVIRVVKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 201/412 (48%), Gaps = 39/412 (9%)

Query: 35  HGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
           H  L+K G +        L+  YAK   +     +FD+   R++  +++L+     + + 
Sbjct: 26  HARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESP 85

Query: 95  KACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           +  L L  +M S+ +++P+ F L++   A+  L S+  G Q+HG  + S +  + VV +S
Sbjct: 86  ELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSS 145

Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ------- 206
           +IDMY KCG  ++A ++FD + AK+ + W A+I+GYVL G SD+ L LFR M        
Sbjct: 146 LIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAW 205

Query: 207 --------EHGE-----------------IPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
                     GE                 I D F  +S +     L +   G Q+H   +
Sbjct: 206 TALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTM 265

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
             GF  S+  ++  ++VD Y KC  +  AR VF+ I  + +ISW+++++G AQ     EA
Sbjct: 266 RLGFSSSM--IVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEA 323

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI--V 359
             L+ ++    ++ +      ++   +   LV++G+Q+   + K   G++  + +    +
Sbjct: 324 FSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFD-SMKGEYGINPRLQHYTCYL 382

Query: 360 DMYLKCGLIDEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
           D+  + G + EA EL   MP V +  TW  +++   K+  A+ ++ +   +L
Sbjct: 383 DLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLL 434



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 119/238 (50%), Gaps = 32/238 (13%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLHG  V   +S D ++ + LIDMY KCG  + A  VFD ++ +N V WTAL+ G++ 
Sbjct: 124 GKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVL 183

Query: 91  NGNAKACLSLFCQMGS--------------------SSVK------------PNEFTLST 118
           NG +   L LF  M                      S+VK             + F LS+
Sbjct: 184 NGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSS 243

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            I  +  L++   G Q+H + M+ GF  + +VGN+++DMYSKC  I+ A  +F+ +  + 
Sbjct: 244 AIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRD 303

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
           +I+W  M+ G    G +++   L+ +M   G  P+E TF   + AC   G V  G Q+
Sbjct: 304 IISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQL 361



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 4/161 (2%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G QLH   +++GFS  +++ N ++DMY+KC +++ A  VF+++  R+++SWT ++ G  Q
Sbjct: 257 GRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQ 316

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           +G A+   SL+ +M  + VKPNE T    I A      V+ G Q+    MK  +  NP +
Sbjct: 317 HGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFD-SMKGEYGINPRL 375

Query: 151 GNSI--IDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
            +    +D+ S+ G + EA  +   MP      TW ++++ 
Sbjct: 376 QHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSA 416


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/494 (39%), Positives = 302/494 (61%), Gaps = 11/494 (2%)

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           M E  ++P++FT+   LKAC  +G++  G  +HG ++  GF   V   +  +LV  Y  C
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVN--VQNTLVHMYCCC 58

Query: 265 ----GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
               G +  AR+VFD + +   +SWS++I GY +    ++A+ LFR+++ + +  D   +
Sbjct: 59  RGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITM 118

Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
            S++        +E GK + +Y  K     +  +SN+++DM+ KCG +D+AT LF  M  
Sbjct: 119 VSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE 178

Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
           +N+V+WT +I G   HG   EAV +F +M+   V PD V ++ +LSACSHSGLV++ + Y
Sbjct: 179 RNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRY 238

Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           F  +  D  + P+IEHY C+VD L RAG + EA   ++ MP+ P+  +W+TL++ACR HG
Sbjct: 239 FDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHG 298

Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
           +L+LG ++   L+R +  +  NYV++SNI+A    W +  R+R+    KG+KK+ G + +
Sbjct: 299 ELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMI 358

Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
           E+D EI+ F  GD +H  +++I++++ EM K MK   G++      L DI +E KE++L 
Sbjct: 359 ELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRA-GYMPTTTEVLLDIDDEDKEDTLN 417

Query: 621 VHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
            HSEKLAI  AL    LN  PG +IR+ KNLRVC DCH   K +SKI     VVRD  RF
Sbjct: 418 RHSEKLAIAFAL----LNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRF 473

Query: 681 HRFEGGVCSCGDYW 694
           H F+ G+CSC D+W
Sbjct: 474 HHFKNGLCSCRDFW 487



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 18/314 (5%)

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC----GRINE 166
           PN+FT    +KA   + ++  G  +HG  MK GF     V N+++ MY  C    G I  
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A ++FD M     ++W+AMI GYV  G S   + LFR+MQ  G  PDE T  S L AC  
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
           LG++  G  +  ++       +V+  ++ +L+D + KCG + +A  +F  + +++++SW+
Sbjct: 128 LGALELGKWVESYVEKERVQKNVE--LSNALIDMFAKCGDVDKATNLFRSMRERNIVSWT 185

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           S+I G A      EA+ +F ++    +  D  V   ++   +   LV++GK+      K 
Sbjct: 186 SVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRK- 244

Query: 347 PSGLDTSVSNSI------VDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLA 399
               D S+   I      VDM  + GL+ EA +   EMP+  N V W  +I     HG  
Sbjct: 245 ----DFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGEL 300

Query: 400 KEAVGLFRKMLLDD 413
           K    + R+++ ++
Sbjct: 301 KLGEKITRQLIRNE 314



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 176/367 (47%), Gaps = 20/367 (5%)

Query: 11  ERQRLADS------LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC---- 60
           ER++L +       L+ C+    L+ G  +HG+++K GF  ++ + N L+ MY  C    
Sbjct: 3   ERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGE 62

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G +  A  VFD+M + + VSW+A++ G+++ G +   ++LF +M    V P+E T+ + +
Sbjct: 63  GGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVL 122

Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
            A   L ++E G  +     K   + N  + N++IDM++KCG +++A  +F  M  ++++
Sbjct: 123 SACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIV 182

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           +W ++I G  + G   + + +F +M   G  PD+  F   L AC   G V  G +    +
Sbjct: 183 SWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSM 242

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLA 299
               F    K    G +VD   + G + EA + V ++    + + W +LI        L 
Sbjct: 243 -RKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELK 301

Query: 300 EAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY-----AAKVPSGLDTS 353
              ++ RQL R   +    +VL S   ++A  +  E+  +I          K+P      
Sbjct: 302 LGEKITRQLIRNEPMHESNYVLLS--NIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIE 359

Query: 354 VSNSIVD 360
           + N I +
Sbjct: 360 LDNEIYE 366


>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
 gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
          Length = 637

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 341/593 (57%), Gaps = 13/593 (2%)

Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
           S KP+  T ++ ++      +++ G  +H    +  F+    +GN++I MY  CG ++ A
Sbjct: 52  SSKPDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRA 111

Query: 168 ARMFDVMPAKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
            + FD + +++  ++WN+MIAGY    +S + L LF+ M   G  P++ TF S L A G+
Sbjct: 112 KKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGN 171

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC-----GCLVEARRVFDLIEQKS 281
           LG++  G+ IH  ++         T +A +L++F+ KC     G   + + +FD +  + 
Sbjct: 172 LGALPEGSAIHEEVLEHDC--ETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRD 229

Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
            +SWS+L+  YAQ      +MELF+++     +   F   S++      + + +G+ +H+
Sbjct: 230 DVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHS 289

Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
                    D  + N IV+M+ +CG ++E++  F EM  ++ V+W+++I+ +  +G   E
Sbjct: 290 SIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAE 349

Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
           A+  F  M LD   PD + ++++LS C+H+GL+ +++ +   +  D  + P ++HY C+V
Sbjct: 350 ALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARGHLVDMVGDYALVPGLDHYVCLV 409

Query: 462 DSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPV 521
           D L R+GRL  A+ L+E+MP +P  + W TLL+AC++ GDL+ G  VG+  L  D D   
Sbjct: 410 DLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLATDPDTSA 469

Query: 522 NYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEK 581
            Y ++S+I+A+A   NE   +RK    +G+KK AG S++EV   +H F  G+ +HP    
Sbjct: 470 PYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSYIEVHDRVHEFKAGEVSHPRHRD 529

Query: 582 IHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQP 641
           I   LM+++++M E  G V   +   +D++EE KE  L  HSEKLAIGL LV      +P
Sbjct: 530 ILYELMQIQRKMVEA-GCVRDTRLVSYDLEEEEKENLLTYHSEKLAIGLGLV----TTRP 584

Query: 642 GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           G  +RV KNLRVC DCH  IK +S+I     VVRD  RFH FE GVCSC DYW
Sbjct: 585 GTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFEDGVCSCNDYW 637



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 199/424 (46%), Gaps = 20/424 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C+    LD G  LH  + +  F     L N LI MY  CG+++ A   FD++  
Sbjct: 61  ASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKAFDRIDS 120

Query: 76  RN-VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           RN  VSW +++ G+ QN  +K  L LF  M     +PN+ T  + + A+G L ++  G  
Sbjct: 121 RNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGALPEGSA 180

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKC-----GRINEAARMFDVMPAKSLITWNAMIAGY 189
           IH   ++   E +  V  ++I+ + KC     G  ++   +FD M  +  ++W+ ++  Y
Sbjct: 181 IHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAY 240

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
             +      + LF+KM   G  P  FTF S + ACG L ++  G  +H  ++ S   + V
Sbjct: 241 AQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDV 300

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
             V+   +V+ + +CG + E+   F  + Q+  +SWS +I  +A   + AEA+E F  + 
Sbjct: 301 --VLQNGIVNMFGRCGSVEESSSAFQEMLQRDAVSWSIMISAFAHNGHGAEALETFLAMN 358

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGK-----QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
                 D     S++ V A   L+   +      +  YA  VP GLD  V   +VD+  +
Sbjct: 359 LDGQTPDELTFVSILSVCAHAGLLRDARGHLVDMVGDYAL-VP-GLDHYV--CLVDLLCR 414

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            G +  A EL   MP + +   W  ++      G  K    + +  L  D  PD  A  A
Sbjct: 415 SGRLGAAEELVETMPYEPHGSAWLTLLAACKMQGDLKRGARVGKSFLATD--PDTSAPYA 472

Query: 424 VLSA 427
           +LS+
Sbjct: 473 LLSS 476


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/589 (35%), Positives = 333/589 (56%), Gaps = 10/589 (1%)

Query: 109 VKPNEFTLSTNIKASGVLSSVEN-GMQIHGMCMKSGF-EWNPVVGNSIIDMYSKCGRINE 166
           ++PN+FT  +  KA+         G QIH + ++ G+   +P V  + +DMY K GR+  
Sbjct: 6   LRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKL 65

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  MP ++++ WNA++   VL G   + +  +  ++E G +P+  +  +   AC  
Sbjct: 66  ARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAG 125

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
              +  G Q HGF++  GF   V   +  S+VDFY KC C  +AR VFD +  ++ +SW 
Sbjct: 126 AMYLSLGEQFHGFVVKCGFEMDVS--VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 183

Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           S++  YAQ     EA   +   R    +   F++SS +   A    +  G+ +HA A + 
Sbjct: 184 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 243

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
               +  V++++VDMY KCG +++A ++F E P +N+VTW  +I GY   G A+ A+ +F
Sbjct: 244 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 303

Query: 407 RKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
             M+   +  P+ +  + V+++CS  GL ++  E F  +     ++PR EHY+C+VD LG
Sbjct: 304 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 363

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG  ++A  +I+ MP++PSI++W  LL AC++HG  ELGR   E L  LD  +  N+V+
Sbjct: 364 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVL 423

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN+ A AG W E   +RK  ++ G+KK  G SWV     +H F   D  H +  +I  +
Sbjct: 424 LSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQAL 483

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L ++ K+M+   G++   +Y+L+D++EE KE  +  HSEKLA+   L+       PG  I
Sbjct: 484 LSKLRKQMQAA-GYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLI----CIPPGVPI 538

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLR+C DCH   K +S I+    +VRD  RFH F+   CSCGDYW
Sbjct: 539 RIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 187/391 (47%), Gaps = 10/391 (2%)

Query: 31  GVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           G Q+H   ++ G+   D  ++   +DMY K G +  A  +F +M  RNVV+W A+M   +
Sbjct: 30  GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 89

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
            +G     +  +  +  +   PN  +      A      +  G Q HG  +K GFE +  
Sbjct: 90  LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 149

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           V NS++D Y KC    +A  +FD M  ++ ++W +M+A Y   G  ++    +   +  G
Sbjct: 150 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 209

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
           E P +F  +S L  C  L  +  G  +H   + S    ++   +A +LVD Y KCGC+ +
Sbjct: 210 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANI--FVASALVDMYGKCGCVED 267

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFA 328
           A ++F    Q+++++W+++I GYA   +   A+ +F  + R      +   L +++   +
Sbjct: 268 AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS 327

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
              L + G ++     +   G++    +   +VD+  + G+ ++A E+   MP++ ++  
Sbjct: 328 RGGLTKDGYELFE-TMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISV 386

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
           W  ++     HG  K  +G      L +++P
Sbjct: 387 WGALLGACKMHG--KTELGRIAAEKLFELDP 415



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 3/270 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+  + L  G Q HG +VK GF  D+ + N ++D Y KC     A AVFD M  RN VSW
Sbjct: 123 CAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSW 182

Query: 82  TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMK 141
            +++  + QNG  +   + +     S  +P +F +S+ +     L  +  G  +H + ++
Sbjct: 183 CSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVR 242

Query: 142 SGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLL 201
           S  + N  V ++++DMY KCG + +A ++F   P ++L+TWNAMI GY   G +   LL+
Sbjct: 243 SCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLV 302

Query: 202 FRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           F  M   GE  P+  T  + + +C   G    G ++    +   F    +T     +VD 
Sbjct: 303 FDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFE-TMRERFGIEPRTEHYACVVDL 361

Query: 261 YVKCGCLVEARRVFDLIEQKSVIS-WSSLI 289
             + G   +A  V   +  +  IS W +L+
Sbjct: 362 LGRAGMEEQAYEVIQGMPMRPSISVWGALL 391



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           ++ +L  C+  L L  G  LH   V+     ++ + + L+DMY KCG +  A  +F +  
Sbjct: 217 VSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP 276

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGM 133
           +RN+V+W A++ G+   G+A+  L +F  M  S    PN  TL   I +       ++G 
Sbjct: 277 QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGY 336

Query: 134 QIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGYV 190
           ++    M+  F   P   +   ++D+  + G   +A  +   MP +  I+ W A++    
Sbjct: 337 ELFET-MRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACK 395

Query: 191 LAGYSDKGLLLFRKMQE 207
           + G ++ G +   K+ E
Sbjct: 396 MHGKTELGRIAAEKLFE 412


>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 597

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/573 (37%), Positives = 332/573 (57%), Gaps = 11/573 (1%)

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           LS  ++AS   S  +   +IH + +++GF     +   +++     G +  A ++FD MP
Sbjct: 13  LSELLRASS--SKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMP 70

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
              +  WN +  GYV      + +LL++KM++ G  PDEFT+   +KA   LG +  G  
Sbjct: 71  KPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVS 130

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           +H  ++ +GF      ++A  LV  Y+K G L  A  +F+ ++ K +++W++ I    Q 
Sbjct: 131 LHAHVLKNGF--ECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQT 188

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
            N A A+E F ++   ++Q D F + SM+        ++ G++I+  A K     +  V 
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVE 248

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           N+ +DM+LKCG  + A  LF++M  +NVV+W+ +I GY  +G + EA+ LF  M  + + 
Sbjct: 249 NARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLR 308

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLC--NDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
           P+ V +L VLSACSH+GLV E + YFS +   NDK ++PR EHY+C+VD LGR+G L+EA
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEA 368

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
              I+ M V+P   IW  LL AC VH D+ LG++V ++L+    D    +V++SNI+A A
Sbjct: 369 YEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428

Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
           G W+  +++R   R  G KKVA  S VE D +IHFF  GD +HP ++ I++ L E+ K++
Sbjct: 429 GKWDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKI 488

Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
           +  +G+V       HD++ E KE SL  HSEKLAI   L+ G    + G  IRV KNLR 
Sbjct: 489 R-NMGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLING----RAGHPIRVMKNLRT 543

Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGG 686
           C DCH F K +S++     ++RD  RFH F  G
Sbjct: 544 CDDCHVFSKFVSRLTSREIIMRDKNRFHHFRNG 576



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 5/352 (1%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H  +++ GFS    L   L++     G+M  A  VFD+M +  +  W  L  G+++N 
Sbjct: 29  KIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQ 88

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
                + L+ +M    V+P+EFT    +KA   L  +  G+ +H   +K+GFE   +V  
Sbjct: 89  LPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVAT 148

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            ++ MY K G ++ A  +F+ M  K L+ WNA IA  V  G S   L  F KM       
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQF 208

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D FT  S L ACG LGS+  G +I+          ++  ++  + +D ++KCG    AR 
Sbjct: 209 DSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNI--IVENARLDMHLKCGSTEAARV 266

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD ++Q++V+SWS++I+GYA   +  EA+ LF  ++   L+ +      ++   +   L
Sbjct: 267 LFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGL 326

Query: 333 VEQGKQIHAYAAKV-PSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK 381
           V +GK+  +   ++    L+    +   +VD+  + GL++EA E   +M V+
Sbjct: 327 VNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVE 378



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 118/215 (54%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           +L  GV LH  ++K GF    ++  +L+ MY K GE++ A  +F+ M  +++V+W A + 
Sbjct: 124 VLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIA 183

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
             +Q GN+   L  F +M + +V+ + FT+ + + A G L S++ G +I+    K   E 
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIEC 243

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +V N+ +DM+ KCG    A  +FD M  +++++W+ MI GY + G S + L LF  MQ
Sbjct: 244 NIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQ 303

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
             G  P+  TF   L AC   G V  G +    ++
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 56/293 (19%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SF++VS        L  C +   LD G +++    K     ++++ N  +DM+ KCG   
Sbjct: 210 SFTVVS-------MLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTE 262

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +FD M +RNVVSW+ ++ G+  NG++   L+LF  M +  ++PN  T        G
Sbjct: 263 AARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTF------LG 316

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM---------P 175
           VLS+                              S  G +NE  R F +M         P
Sbjct: 317 VLSAC-----------------------------SHAGLVNEGKRYFSLMVRLNDKNLEP 347

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            K    +  M+     +G  ++     +KM+     PD   + + L AC     +  G +
Sbjct: 348 RKE--HYACMVDLLGRSGLLEEAYEFIKKMRVE---PDTGIWGALLGACAVHRDMILGQK 402

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSL 288
           +   L+ +        V+  ++     K  C+ + R     +  K V ++SS+
Sbjct: 403 VADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/628 (35%), Positives = 333/628 (53%), Gaps = 48/628 (7%)

Query: 105 GSSSVK-PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGR 163
           G+SS   P+  T    +K    L+ ++   QIH   +  G   N  +   +I  Y  C  
Sbjct: 46  GTSSFSLPSHSTFVQLLKKRPSLTQIK---QIHAQVVTHGLAQNTSLLGPLIHSYIGCRN 102

Query: 164 INEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI--PDEFTFTST 220
           ++ A  +FD  P+    I WN MI  Y     S + L LF +M  HG     D++TFT  
Sbjct: 103 LSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFV 162

Query: 221 LKACGSLGSVGG-GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
             AC    ++ G G  +HG ++  G  Y     +  SLV+ Y     +V+A+RVFD + Q
Sbjct: 163 FTACSRHPTLRGYGENVHGMVVKDG--YESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQ 220

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQVDGF---------------- 318
           + VI+W+S++ GYA    L  A ELF  +  R     ++ V G+                
Sbjct: 221 RDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDM 280

Query: 319 -----------VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
                      VL S++   A    ++QGK IH Y  K    L +++S +++DMY KCG 
Sbjct: 281 LCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGR 340

Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
           ID A  +F+ +  ++++TWT +I+G   HGL  E +  F +ML +  +PD +  L VL+ 
Sbjct: 341 IDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNG 400

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
           CSHSGLVEE    F  +     + P++EHY C++D LGRAGRL+ A   I+SMP++P + 
Sbjct: 401 CSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVV 460

Query: 488 IWQTLLSACRVHGDLELG-REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLA 546
            W+ LLSACR+HGD++LG R +  I     G +   YV++SN++A  G W    ++RK  
Sbjct: 461 AWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAM 520

Query: 547 RSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYA 606
             +G +   G SW+E+D  +H F   D  HP   +I++ L E+ +R+  E G+V   K  
Sbjct: 521 SQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQV 580

Query: 607 LHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSK 666
           L D+ EE KE+++  HSEKLA+   L    L+ Q G  IR+ KNLR C DCH  +K +S 
Sbjct: 581 LFDLNEEDKEQAVSWHSEKLAVAFGL----LSTQEG-TIRITKNLRTCEDCHSAMKTISL 635

Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +     VVRD +RFH F  G CSC DYW
Sbjct: 636 VFNREIVVRDRSRFHTFRYGNCSCTDYW 663



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 191/405 (47%), Gaps = 44/405 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALMCGFLQN 91
           Q+H  +V  G + +  L   LI  Y  C  ++ A  VFD+       + W  ++  + + 
Sbjct: 73  QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKT 132

Query: 92  GNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVEN-GMQIHGMCMKSGFEWNP 148
            +++  L LF QM         +++T +    A     ++   G  +HGM +K G+E + 
Sbjct: 133 PSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDI 192

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG--------------- 193
            VGNS+++MYS   R+ +A R+FD MP + +ITW +++ GY + G               
Sbjct: 193 FVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGR 252

Query: 194 ----------------YSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQI 236
                           + ++ L  F  M  H E+ P+E    S L AC  LG++  G  I
Sbjct: 253 NDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWI 312

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H ++  +    S  + I+ +L+D Y KCG +  ARRVFD + ++ +++W+S+I G +   
Sbjct: 313 HVYIDKNRILLS--SNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHG 370

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP-SGLDTSVS 355
             AE +  F ++     + D   L  ++   +   LVE+G  I  +   +P  G+   + 
Sbjct: 371 LGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSI--FHDMIPLWGIVPKLE 428

Query: 356 N--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
           +   ++D+  + G ++ A E    MP++ +VV W  +++    HG
Sbjct: 429 HYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHG 473



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 36/303 (11%)

Query: 21  CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
           C     L  YG  +HG +VK G+  D+ + N L++MY+    M  A  VFD+M +R+V++
Sbjct: 166 CSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVIT 225

Query: 81  WTALMCGFLQNGNAKACLSLFCQMGSSS-------------------------------- 108
           WT+++ G+   G       LF  M   +                                
Sbjct: 226 WTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           VKPNE  L + + A   L +++ G  IH    K+    +  +  ++IDMY+KCGRI+ A 
Sbjct: 286 VKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCAR 345

Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
           R+FD +  + L+TW +MI+G  + G   + L  F +M   G  PD+ T    L  C   G
Sbjct: 346 RVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSG 405

Query: 229 SVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA-RRVFDLIEQKSVISWS 286
            V  G  I H  +   G    ++    G L+D   + G L  A   +  +  +  V++W 
Sbjct: 406 LVEEGLSIFHDMIPLWGIVPKLEHY--GCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWR 463

Query: 287 SLI 289
           +L+
Sbjct: 464 ALL 466



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 2/195 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    LD G  +H  + K        ++  LIDMYAKCG ++ A  VFD + 
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLH 352

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R++++WT+++ G   +G    CL  F +M +   KP++ TL   +        VE G+ 
Sbjct: 353 KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLS 412

Query: 135 I-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLA 192
           I H M    G          +ID+  + GR+  A      MP +  ++ W A+++   + 
Sbjct: 413 IFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIH 472

Query: 193 GYSDKGLLLFRKMQE 207
           G  D G  +   + E
Sbjct: 473 GDVDLGERIINHIAE 487


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 329/607 (54%), Gaps = 12/607 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V+F+ V         L  C+   +LD G QLHG  V  G   D  + N L+ MY+KC 
Sbjct: 158 NSVTFACV---------LSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQ 208

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FD   + ++VSW  ++ G++QNG       LF  M S+ +KP+  T ++ + 
Sbjct: 209 CLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLP 268

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
               L S+++  +IHG  ++     +  + +++ID+Y KC  +  A ++     +   + 
Sbjct: 269 CVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVV 328

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
              MI+GYVL G + + L  FR + +    P   TF+S   A   L ++  G ++HG +I
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +      K  +  +++D Y KCG L  A RVF+ I +K  I W+S+I   +Q     EA
Sbjct: 389 KTKL--DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LFRQ+     + D   +S  +   A+   +  GK+IH    K P   D    +S++DM
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDM 506

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ++ +  +F+ M  +N V+W  II+ YG HG  KE + LF +ML + ++PD V +
Sbjct: 507 YAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTF 566

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L ++SAC H+G V+E   Y+  +  +  +  R+EHY+C+ D  GRAGRLDEA   I SMP
Sbjct: 567 LGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMP 626

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
             P   +W TLL AC +HG++EL     + L  LD  N   YV+++N+ A AG W +  +
Sbjct: 627 FPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLK 686

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R + + +G++KV G SW+EV+   H F   D +HPLT +I+ VL  +   +K+E G+V 
Sbjct: 687 VRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKE-GYVP 745

Query: 602 GVKYALH 608
            +   +H
Sbjct: 746 QLYLPMH 752



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 258/517 (49%), Gaps = 7/517 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  +  MG   D+ + + LI +YA+ G ++ A  +FD + +++ V W  ++ G+++
Sbjct: 77  GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG++   + +F +M  S +KPN  T +  +      + ++ G Q+HG+ +  G E +  V
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPV 196

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MYSKC  +  A ++FD  P   L++WN +I+GYV  G   +   LFR M   G 
Sbjct: 197 ANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGI 256

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  TF S L     L S+    +IHG++I       V   +  +L+D Y KC  +  A
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV--FLKSALIDIYFKCRDVEMA 314

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +++         +  +++I GY       EA+E FR L +  ++      SS+   FA  
Sbjct: 315 QKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +  GK++H    K        V ++I+DMY KCG +D A  +FN +  K+ + W  +I
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMI 434

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T   ++G   EA+ LFR+M ++    D V+    LSAC++   +   +E    +     +
Sbjct: 435 TSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGP-L 493

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  +   S ++D   + G L+ ++ + + M  +  ++ W +++SA   HGDL+    +  
Sbjct: 494 RSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVS-WNSIISAYGNHGDLKECLALFH 552

Query: 511 ILLRLDGDNPVNYVMMSNIHA--DAGSWNECERLRKL 545
            +LR +G  P +   +  I A   AG  +E  R   L
Sbjct: 553 EMLR-NGIQPDHVTFLGIISACGHAGQVDEGIRYYHL 588



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 233/466 (50%), Gaps = 10/466 (2%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY + G +  A  +F  +      +W  ++ GF   G     L  + +M  + V P+++T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               +KA   L SV+ G  +H      G + +  VG+S+I +Y++ G +++A  +FD +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGT 234
            K  + WN M+ GYV  G S   + +F +M+ H EI P+  TF   L  C S   +  GT
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+HG  ++ G    + + +A +L+  Y KC CL  AR++FD   Q  ++SW+ +I GY Q
Sbjct: 180 QLHGIAVSCGL--ELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              + EA  LFR +    ++ D    +S +    +   ++  K+IH Y  +    LD  +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            ++++D+Y KC  ++ A ++  +    + V  T +I+GY  +G  KEA+  FR ++ + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P  V + ++  A +    +   +E    +   K +  +    S I+D   + GRLD A 
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
            +   +  K +I  W +++++C  +G     + L R++G    R D
Sbjct: 417 RVFNRITEKDAIC-WNSMITSCSQNGRPGEAINLFRQMGMEGTRYD 461


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 329/598 (55%), Gaps = 42/598 (7%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++ + +QIH +  + G + +P++   +   Y+  GR++ +  +F      S+  W A+I 
Sbjct: 42  TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           G+ L G  ++ L  + +M   G  P+ FTF+S LK C     +  G  +H   +  GF  
Sbjct: 102 GHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDS 157

Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS----------------------- 284
            +   +   L+D Y + G +V A+++FD + +KS++S                       
Sbjct: 158 DL--YVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDG 215

Query: 285 --------WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
                   W+ +I GY Q     EA+ LFR++ +   + +   + S++        +E G
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           + +H+Y        +  V  ++VDMY KCG +++A  +F+++  K+VV W  +I GY  H
Sbjct: 276 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMH 335

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEH 456
           G ++EA+ LF+ M    + P  + ++ +LSAC HSG V E  + F+++ ++  ++P+IEH
Sbjct: 336 GFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEH 395

Query: 457 YSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLD 516
           Y C+V+ LGRAG +++A  L+++M ++P   +W TLL ACR+HG + LG ++ E+L+  +
Sbjct: 396 YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 455

Query: 517 GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTH 576
             N   Y+++SNI+A  G+W+   RLR + +  G+KK  G S +EV+ ++H F  G   H
Sbjct: 456 LANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNH 515

Query: 577 PLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGG 636
           P  ++I+ +L E+   +K   G+       LHDI E  KE SL VHSEKLAI   L+   
Sbjct: 516 PKRKEIYMMLEEINGWLKSH-GYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLI--- 571

Query: 637 LNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            N QPG  I++ KNLRVC DCHE  K +SKI     VVRD  RFH F  G CSCGDYW
Sbjct: 572 -NTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 199/408 (48%), Gaps = 41/408 (10%)

Query: 24  KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTA 83
           K+  + + +Q+H  L + G     +LN  L   YA  G ++ + A+F +    +V  WTA
Sbjct: 39  KSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTA 98

Query: 84  LMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           ++ G    G  +  L+ + QM +  V+PN FT S+ +K    L  +E G  +H   +K G
Sbjct: 99  IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALHSQAVKLG 154

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT---------------------- 181
           F+ +  V   ++D+Y++ G +  A ++FD MP KSL++                      
Sbjct: 155 FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 214

Query: 182 ---------WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
                    WN MI GY   G  ++ L+LFR+M +    P+E T  S L ACG LG++  
Sbjct: 215 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 274

Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
           G  +H ++  +G  ++V   +  +LVD Y KCG L +AR VFD I+ K V++W+S+I+GY
Sbjct: 275 GRWVHSYIENNGIQFNVH--VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 332

Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
           A      EA++LF+ +    L         ++        V +G  I     K   G++ 
Sbjct: 333 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN-KMKDEYGIEP 391

Query: 353 SVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
            + +   +V++  + G +++A EL   M ++ + V W  ++     HG
Sbjct: 392 KIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 4/178 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C +   L+ G  +H  +   G  F++ +   L+DMY+KCG +  A  VFDK+ +++V
Sbjct: 263 LSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDV 322

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W +++ G+  +G ++  L LF  M    + P   T    + A G    V  G  I   
Sbjct: 323 VAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK 382

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVLAG 193
            MK  +   P + +   ++++  + G + +A  +   M  +   + W  ++    L G
Sbjct: 383 -MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/643 (34%), Positives = 334/643 (51%), Gaps = 66/643 (10%)

Query: 35  HGALVKMGFSFDLMLNND------LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           HG +      FDL    D      ++  Y + G +  A  +F+   E +V+SW ALM G+
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFE 145
           +Q G       LF +M      P    +S NI  SG       VE         ++  F 
Sbjct: 204 VQWGKMSEARELFDRM------PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           W  VV       Y++ G + EA R+FD MP ++ ++WNAM+A Y+     D+   LF  M
Sbjct: 258 WTAVVSG-----YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
                             C ++ S                     T++ G     Y + G
Sbjct: 313 P-----------------CRNVASW-------------------NTMLTG-----YAQAG 331

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
            L EA+ VFD + QK  +SW++++  Y+Q     E ++LF ++      V+    + ++ 
Sbjct: 332 MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLS 391

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             AD A +E G Q+H    +   G+   V N+++ MY KCG +++A   F EM  ++VV+
Sbjct: 392 TCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVS 451

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           W  +I GY +HG  KEA+ +F  M     +PD +  + VL+ACSHSGLVE+   YF  + 
Sbjct: 452 WNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMH 511

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
           +D  +  + EHY+C++D LGRAGRL EA +L++ MP +P   +W  LL A R+H + ELG
Sbjct: 512 HDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELG 571

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           R   E +  L+ +N   YV++SNI+A +G W +  ++R +   +G+KKV G SW+EV  +
Sbjct: 572 RSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNK 631

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD  HP  EKI+  L +++ RMK+  G+V      LHD++EE KE  L+ HSEK
Sbjct: 632 VHTFSAGDCVHPEKEKIYAFLEDLDMRMKKA-GYVSATDMVLHDVEEEEKEHMLKYHSEK 690

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           LA+      G LN  PG+ IRV KNLRVCGDCH   K   +++
Sbjct: 691 LAVAY----GILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELM 729



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 32/349 (9%)

Query: 149 VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           +  N  I  + + GR+ +A R+F  MP +S  T+NAM+AGY   G       LFR +   
Sbjct: 39  IRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR- 97

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL-ITSGFPYSVKTVIAGSLVDFYVKCGCL 267
              PD +++ + L A     S+     +   + +     Y+V       ++  +   G +
Sbjct: 98  ---PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNV-------MISSHANHGLV 147

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR  FDL  +K  +SW+ ++  Y +   + EA  LF    E     D    +++M  +
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE----WDVISWNALMSGY 203

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
             +  + + +++     ++P G D    N +V  Y + G + EA  LF+  PV++V TWT
Sbjct: 204 VQWGKMSEARELF---DRMP-GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL-CN 446
            +++GY ++G+ +EA  +F  M     E + V++ A+++A     +++E++E F+ + C 
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 315

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           +      +  ++ ++    +AG L+EAK + ++MP K +++ W  +L+A
Sbjct: 316 N------VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-WAAMLAA 357



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 11/188 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR +F+ V         L  C+    L+ G+QLHG L++ G+     + N L+ MY KC
Sbjct: 381 VNRSAFACV---------LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 431

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G M  A   F++M ER+VVSW  ++ G+ ++G  K  L +F  M ++S KP++ TL   +
Sbjct: 432 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 491

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSL 179
            A      VE G+   + M    G    P     +ID+  + GR+ EA  +   MP +  
Sbjct: 492 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 551

Query: 180 IT-WNAMI 186
            T W A++
Sbjct: 552 STMWGALL 559



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 148/347 (42%), Gaps = 67/347 (19%)

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           + + +   +  +++ G + +A R+F  + ++S  ++++++ GY+    L  A  LFR + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 310 E----------RSLQV-----------------DGFVLSSMMGVFADFALVEQGKQIH-- 340
                       +L V                 D    + M+   A+  LV   +     
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156

Query: 341 -----------AYAAKVPSG--------------LDTSVSNSIVDMYLKCGLIDEATELF 375
                        AA V +G               D    N+++  Y++ G + EA ELF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216

Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           + MP ++VV+W ++++GY + G   EA  LF    + DV      + AV+S  + +G++E
Sbjct: 217 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLE 272

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           E++  F  +     +      ++ +V +  +   +DEAK L   MP + ++A W T+L+ 
Sbjct: 273 EARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTG 326

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
               G LE  + V + + + D    V++  M   ++  G   E  +L
Sbjct: 327 YAQAGMLEEAKAVFDTMPQKDA---VSWAAMLAAYSQGGCSEETLQL 370


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/670 (33%), Positives = 341/670 (50%), Gaps = 88/670 (13%)

Query: 99  SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
           SL+  +   S  P+   L + +K+     +      +H   + SG   +P V +S++  Y
Sbjct: 6   SLYHFLRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSLLHSY 62

Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK--GLL---------------- 200
            + G    A  +FD MP K+++ W+A+IAGY   G ++   GLL                
Sbjct: 63  IRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWN 122

Query: 201 -----------------LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
                               +M   G  PD    +  L A G +  V  G Q+HG+++ +
Sbjct: 123 GLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKA 182

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVF------DLIE------------------- 278
           G       V A  L+D Y KCG   E  RVF      D+                     
Sbjct: 183 GCRLDACVVTA--LIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALL 240

Query: 279 ----------QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
                     + +V+SW+S++    Q     EA++LFR ++   ++ +   +  ++  FA
Sbjct: 241 LFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFA 300

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           + A +  G+  H ++ +     D  V +++VDMY KCG    A  +F+ MP +NVV+W  
Sbjct: 301 NVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNA 360

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           +I GY  HG A  AV LF  M     +PD V +  VL ACS +GL EE + YF+ +    
Sbjct: 361 MIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGH 420

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            + PR+EHY+C+V  LGR+G+LDEA +LI  MP +P   IW +LL +CRV+G++ L    
Sbjct: 421 GISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVA 480

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
            E L +L+  N  NYV++SNI+A    W+   R+R   ++ GLKK  G SW+E+  ++H 
Sbjct: 481 AEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHM 540

Query: 569 FYGGDDTHPL----TEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
              GD++HP+    TEK++Q+ +EM +     LGF     + LHD++E+ K+  L VHSE
Sbjct: 541 LLAGDNSHPMMTAITEKLNQLTIEMNR-----LGFAPSRDFVLHDVEEQEKDNILAVHSE 595

Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
           KLA+ L L+    + +PG  +RV KNLR+CGDCHE +K +S   +    VRD  RFH F+
Sbjct: 596 KLAVALGLI----STRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFK 651

Query: 685 GGVCSCGDYW 694
            G CSCGDYW
Sbjct: 652 DGKCSCGDYW 661



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 198/447 (44%), Gaps = 82/447 (18%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S   +   L  +L+ C    L      LH A V  G + D  + + L+  Y + G    A
Sbjct: 15  SFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAA 71

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT----------- 115
            +VFD+M E+NVV W+AL+ G+   G+A+A   L  QM S+ V+PN  T           
Sbjct: 72  RSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRS 131

Query: 116 ------------------------LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                                   +S  + A G +  V  G Q+HG  +K+G   +  V 
Sbjct: 132 GRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVV 191

Query: 152 NSIIDMYSKCGRINEAARMF------DVMPAKSL-------------------------- 179
            ++IDMY KCGR +E  R+F      DV    +L                          
Sbjct: 192 TALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVE 251

Query: 180 ---ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
              ++W +++A  V  G   + + LFR MQ  G  P+  T    L A  ++ ++  G   
Sbjct: 252 LNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSA 311

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H F +  GF + V   +  +LVD Y KCG    AR +FD +  ++V+SW+++I GYA   
Sbjct: 312 HCFSLRKGFLHDV--YVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHG 369

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS- 355
           + A A++LF  +++   + D    + ++G  +   L E+G++   Y  ++  G   S   
Sbjct: 370 DAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR---YFNEMQQGHGISPRM 426

Query: 356 ---NSIVDMYLKCGLIDEATELFNEMP 379
                +V +  + G +DEA +L NEMP
Sbjct: 427 EHYACMVTLLGRSGKLDEAYDLINEMP 453



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 45/299 (15%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD------------------- 71
           G Q+HG +VK G   D  +   LIDMY KCG  +    VF                    
Sbjct: 172 GKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSR 231

Query: 72  ----------------KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
                           + +E NVVSWT+++   +QNG     + LF  M S  V+PN  T
Sbjct: 232 NAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVT 291

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
           +   + A   ++++ +G   H   ++ GF  +  VG++++DMY+KCG+   A  +FD MP
Sbjct: 292 IPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMP 351

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
           ++++++WNAMI GY + G +   + LF  MQ+  + PD  TFT  L AC   G    G +
Sbjct: 352 SRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI-----EQKSVISWSSLI 289
               +   G   S +      +V    + G L EA   +DLI     E  S I W SL+
Sbjct: 412 YFNEM-QQGHGISPRMEHYACMVTLLGRSGKLDEA---YDLINEMPFEPDSCI-WGSLL 465


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/559 (35%), Positives = 320/559 (57%), Gaps = 4/559 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH  ++K  F  DL+  N LI MY K  +M  A  VF +++ ++++SW +++ GF Q G
Sbjct: 220 QLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG 279

Query: 93  NAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                L  F +M S SV +PNEF   +   A   L   + G QIHG+C+K G   +   G
Sbjct: 280 YELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG 339

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
            S+ DMY+KCG +  A  +F  +    L+ WNA+IAG+     + +    F +M+  G +
Sbjct: 340 CSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLV 399

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P++ T  S L AC     +  G Q+H +++  GF   +   +  SL+  Y KC  L +A 
Sbjct: 400 PNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP--VCNSLLSMYSKCSNLNDAL 457

Query: 272 RVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +VF+ I  K+ ++SW++L+    Q+    E + L + +    ++ D   L++++      
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A  E G QIH +  K    LD SVSN++++MY KCG ++ A ++F+ +   ++++W+ +I
Sbjct: 518 ASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLI 577

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY + G  KEA  LFR M    V+P+ + ++ +L+ACSH G+VEE  + +  +  D R+
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P  EH SC+VD L RAG LD A++ I+ MP  P + +W+TLL+AC+VHG+LE+G+   E
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE 697

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L++D  N    VM+ NIHA +G W +  RLR   R   + KV G+SW+E+  ++H F 
Sbjct: 698 NVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFL 757

Query: 571 GGDDTHPLTEKIHQVLMEM 589
             D+ HP   KI+ +L E+
Sbjct: 758 AEDNLHPERGKIYTMLEEL 776



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 252/502 (50%), Gaps = 11/502 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  CS    L++G ++H  ++   +  D++L N ++ MY KCG +  A  +FD M  +NV
Sbjct: 105 INACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNV 164

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G+ + G     ++L+ QM  S   P+ FT  + +K+   L   +   Q+H  
Sbjct: 165 VSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAH 224

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  + +  N++I MY+K  ++ +A  +F  +  K LI+W +MIAG+   GY  + 
Sbjct: 225 VLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEA 284

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-S 256
           L  FR+M       P+EF F S   AC  L     G QIHG  I  G       + AG S
Sbjct: 285 LCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG---SDLFAGCS 341

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L D Y KCG L  AR VF  IE+  +++W+++I G+A   N  E+   F Q+R   L  +
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   ++  ++  G Q+H+Y  K+   LD  V NS++ MY KC  +++A ++F 
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           ++  K ++V+W  ++T   +   A E + L + M    ++PD V    VL +       E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
              +    +     +   I   + +++   + G L+ A+ + +S+   P I  W +L+  
Sbjct: 522 VGSQIHCFIMKSG-LNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579

Query: 496 CRVHGDLELGREVGEILLRLDG 517
              +     G+E  E+   + G
Sbjct: 580 ---YAQAGCGKEAFELFRTMRG 598



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 10/400 (2%)

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           +F +  SS +K    T +  I A   L S+E+G +IH   +   ++ + ++ N I+ MY 
Sbjct: 87  IFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           KCG + EA  MFD MP K++++W +MI+GY   G  D  + L+ +M   G IPD FTF S
Sbjct: 145 KCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGS 204

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            +K+C  L       Q+H  ++ S F      +   +L+  Y K   + +A  VF  I  
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEF--GADLIAQNALISMYTKFSQMADAINVFSRIII 262

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSL-QVDGFVLSSMMGVFADFALVEQGKQ 338
           K +ISW S+I G++Q     EA+  FR++  +S+ Q + FV  S     +     + G+Q
Sbjct: 263 KDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQ 322

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH    K   G D     S+ DMY KCG ++ A  +F  +   ++V W  II G+     
Sbjct: 323 IHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSN 382

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           AKE+   F +M    + P+ V  L++L ACS   ++    +  S +    +M   ++   
Sbjct: 383 AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIV---KMGFNLDIPV 439

Query: 459 C--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           C  ++    +   L++A  + E +  K  I  W TLL+AC
Sbjct: 440 CNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 4/173 (2%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G Q+H  ++K G + D+ ++N LI+MY KCG +  A  +FD +   +++SW++L+ G+
Sbjct: 521 EVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGY 580

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            Q G  K    LF  M    VKPNE T    + A   +  VE G++++   M+  +  +P
Sbjct: 581 AQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRT-MQEDYRISP 639

Query: 149 VVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKG 198
              +   ++D+ ++ G ++ A      MP    ++ W  ++A   + G  + G
Sbjct: 640 TKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVG 692


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/595 (36%), Positives = 326/595 (54%), Gaps = 41/595 (6%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLA 192
           QIH   +KSG   +P      +         + A  +F +         WN MI G   +
Sbjct: 29  QIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSCS 88

Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
              D+ LLL+ +M       + +TF   LKAC +L +    TQIH  +   G+ + +  V
Sbjct: 89  DQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAV 148

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ---------------EEN 297
              SL++ Y   G    A  +FD I++   +SW+S+I GY +               E+N
Sbjct: 149 --NSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKN 206

Query: 298 LA-----------------EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            A                 EA++LF +++  ++  D   L+S +   +    +EQGK IH
Sbjct: 207 NAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIH 266

Query: 341 AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
           +YA K  + +D+ +   ++DMY KCG ++EA  +F  M  K+V  WT +I+GY  HGL +
Sbjct: 267 SYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGR 326

Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
           EA+  F +M    V+P+ + + AVL+ACS++GLVEE +  F+ +  D  +KP IEHY C+
Sbjct: 327 EAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCM 386

Query: 461 VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP 520
           VD LGRAG L+EA   I+ MP+KP+  IW +LL AC++H ++ELG ++GEIL+ +D ++ 
Sbjct: 387 VDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHG 446

Query: 521 VNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTE 580
             YV M+NIHA    W++    R+L R +G+ KV G S + ++   H F  GD +H   +
Sbjct: 447 GRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQ 506

Query: 581 KIHQVLMEMEKRMKEELGFVYGVKYALHD-IQEESKEESLRVHSEKLAIGLALVRGGLNE 639
           +I +      +R  EE G+V  ++  L D + +E KE  +  HSEKLAI   L++     
Sbjct: 507 EI-RTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMK----T 561

Query: 640 QPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +PG  IR+ KNLRVC DCH+ +  +SKI K   V+RD TRFH F+ G CSCGDYW
Sbjct: 562 KPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 42/333 (12%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA-------------------- 58
           L+ CS         Q+H  + K G+  D+   N LI+ YA                    
Sbjct: 117 LKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDA 176

Query: 59  -----------KCGEMNGACAVFDKMLERN-VVSWTALMCGFLQNGNAKACLSLFCQMGS 106
                      K GEM+ A  +F KM E+N  +SWT ++ G++Q G  K  L LF +M +
Sbjct: 177 VSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQN 236

Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
           S+V P+  +L++ + A   L ++E G  IH    K+    + V+   +IDMY+KCG + E
Sbjct: 237 SNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEE 296

Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
           A  +F  M  KS+  W A+I+GY   G   + +  F +MQ  G  P+  TFT+ L AC  
Sbjct: 297 ALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSY 356

Query: 227 LGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQK-SVI 283
            G V  G  +     T    Y++K  I   G +VD   + G L EA R    +  K + +
Sbjct: 357 TGLVEEGKSVFN---TIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAV 413

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            W SL+      +N+    EL  ++ E  +++D
Sbjct: 414 IWGSLLKACQIHKNI----ELGEKIGEILIEMD 442



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 39/390 (10%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER-NVVSWTALMCGFLQN 91
           Q+H  ++K G   D       +         + A  VF    +R +   W  ++ G   +
Sbjct: 29  QIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGLSCS 88

Query: 92  GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                 L L+ +M   S   N +T    +KA   LS+ +   QIH    K G+  +    
Sbjct: 89  DQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAV 148

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           NS+I+ Y+  G    A  +FD +     ++WN++I GYV AG  D  L LFRKM E    
Sbjct: 149 NSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNA 208

Query: 212 --------------------------------PDEFTFTSTLKACGSLGSVGGGTQIHGF 239
                                           PD  +  S L AC  LG++  G  IH +
Sbjct: 209 ISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSY 268

Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
              +     + +V+   L+D Y KCG + EA  VF  ++ KSV  W++LI GYA      
Sbjct: 269 --ANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGR 326

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--S 357
           EA+  F +++   ++ +    ++++   +   LVE+GK +     +    L  ++ +   
Sbjct: 327 EAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIER-DYNLKPTIEHYGC 385

Query: 358 IVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
           +VD+  + GL++EA     +MP+K N V W
Sbjct: 386 MVDLLGRAGLLNEANRFIQKMPLKPNAVIW 415



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 16/202 (7%)

Query: 1   MNRVSFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNN 51
           MN+ +  L  E Q          LA +L  CS+   L+ G  +H    K     D +L  
Sbjct: 223 MNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCC 282

Query: 52  DLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
            LIDMYAKCGEM  A  VF  M  ++V  WTAL+ G+  +G  +  +S F +M +  VKP
Sbjct: 283 VLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKP 342

Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAAR 169
           N  T +  + A      VE G  +    ++  +   P + +   ++D+  + G +NEA R
Sbjct: 343 NAITFTAVLTACSYTGLVEEGKSVFNT-IERDYNLKPTIEHYGCMVDLLGRAGLLNEANR 401

Query: 170 MFDVMPAKSLITWNAMIAGYVL 191
               MP K     NA+I G +L
Sbjct: 402 FIQKMPLKP----NAVIWGSLL 419


>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/529 (38%), Positives = 307/529 (58%), Gaps = 16/529 (3%)

Query: 175 PAKSLITWNAMIAGYVLA-----GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           P      WN +I  +V A     G +   + +F +M+ HG  PD  TF   L++  S   
Sbjct: 20  PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G  +H  ++  G   ++   +  SL+  Y   G +  AR +F ++ +++VISWS +I
Sbjct: 80  LHLGRSVHAQILRFGL--AIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMI 137

Query: 290 LGYAQEENLAEAMELFRQLRE---RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
            GY +     EA+ LFR+++      ++ + F +S ++        +E GK  HAY  K 
Sbjct: 138 NGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 197

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEM-PVKNVVTWTVIITGYGKHGLAKEAVGL 405
              +D  +  +++DMY KCG +++AT +F+ + P K+V+ W+ +I+G   HGLA+E VGL
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGL 257

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F KM+   V P+ V +LAV  AC H GLV E ++Y  R+  D  + P I+HY C+VD  G
Sbjct: 258 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYG 317

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAGR+ EA N+++SMP++P + +W  LLS  R+HGD+E      + L+ L+  N   YV+
Sbjct: 318 RAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVL 377

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A  G W +   +R L  + G+KKV G S +EV   +H F+ GDD+HP T +IH +
Sbjct: 378 LSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMM 437

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L E+ +R+K E G+V   K  L D+ EE KE +L +HSEK    LAL  G L   PG  I
Sbjct: 438 LEEILERLKVE-GYVGNTKEVLLDLDEEGKELALSLHSEK----LALAYGFLKTSPGTPI 492

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           R+ KNLR+C DCH  IK +SK+     +VRD  RFH F  G+CSC DYW
Sbjct: 493 RIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 25/362 (6%)

Query: 81  WTALMCGFLQ-----NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
           W  L+   +Q      G   + +S+F +M    V+P+  T    +++    S +  G  +
Sbjct: 27  WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           H   ++ G   +P V  S+I MYS  G ++ A  +F VMP +++I+W+ MI GYV  G  
Sbjct: 87  HAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 146

Query: 196 DKGLLLFRKMQEHG---EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
            + L LFR+MQ  G     P+EFT +  L ACG LG++  G   H ++   G P  V  V
Sbjct: 147 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMP--VDVV 204

Query: 253 IAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
           +  +L+D Y KCG + +A  VF +L   K V++WS++I G A      E + LF ++  +
Sbjct: 205 LGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQ 264

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI------VDMYLKC 365
            ++ +     ++        LV +GK    Y  ++    D S+  +I      VD+Y + 
Sbjct: 265 GVRPNAVTFLAVFCACVHGGLVSEGKD---YLRRMTE--DYSIIPTIQHYGCMVDLYGRA 319

Query: 366 GLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           G I EA  +   MP++ +V+ W  +++G   HG  +      +K++  ++EP       +
Sbjct: 320 GRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLI--ELEPTNSGAYVL 377

Query: 425 LS 426
           LS
Sbjct: 378 LS 379



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 148/272 (54%), Gaps = 10/272 (3%)

Query: 27  LLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
           LL  G  +H  +++ G + D  +   LI MY+  G ++ A  +F  M ERNV+SW+ ++ 
Sbjct: 79  LLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMIN 138

Query: 87  GFLQNGNAKACLSLFCQM---GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG 143
           G+++ G  K  L+LF +M   G + V+PNEFT+S  + A G L ++E+G   H    K G
Sbjct: 139 GYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCG 198

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
              + V+G ++IDMY+KCG + +A  +F ++ P K ++ W+AMI+G  + G +++ + LF
Sbjct: 199 MPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLF 258

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDF 260
            KM   G  P+  TF +   AC   G V  G     +L      YS+   I   G +VD 
Sbjct: 259 SKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD---YLRRMTEDYSIIPTIQHYGCMVDL 315

Query: 261 YVKCGCLVEARRVF-DLIEQKSVISWSSLILG 291
           Y + G + EA  V   +  +  V+ W +L+ G
Sbjct: 316 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 347



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM-LERN 77
           L  C +   L++G   H  + K G   D++L   LIDMYAKCG +  A  VF  +   ++
Sbjct: 175 LAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD 234

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA---SGVLSSVENGMQ 134
           V++W+A++ G   +G A+ C+ LF +M +  V+PN  T      A    G++S  ++ ++
Sbjct: 235 VMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLR 294

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNAMIAGYVL 191
                M   +   P + +   ++D+Y + GRI EA  +   MP +  ++ W A+++G  +
Sbjct: 295 R----MTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 350

Query: 192 AGYSDKGLLLFRKMQE 207
            G  +   L  +K+ E
Sbjct: 351 HGDIETCELALKKLIE 366


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/590 (34%), Positives = 333/590 (56%), Gaps = 8/590 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    L+ G Q+H  +++ G   D  L N LID Y KCG +  A  +FD M 
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP 311

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            +N++SWT L+ G+ QN   K  + LF  M    +KP+ F  S+ + +   L ++E G Q
Sbjct: 312 NKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQ 371

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+    +  V NS+IDMY+KC  + EA ++FD+  A  ++ +NAMI GY   G 
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGT 431

Query: 195 S---DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
                  L +F  M+     P   TF S L+A  SL S+G   QIHG +   G       
Sbjct: 432 QWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLD--- 488

Query: 252 VIAGS-LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           + AGS L+  Y  C CL ++R VFD ++ K ++ W+S+  GY Q+    EA+ LF +L+ 
Sbjct: 489 IFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQL 548

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
              + D F    M+    + A ++ G++ H    K     +  ++N+++DMY KCG  ++
Sbjct: 549 SRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A + F+    ++VV W  +I+ Y  HG  ++A+ +  KM+ + +EP+ + ++ VLSACSH
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSH 668

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLVE+  + F  +     ++P  EHY C+V  LGRAGRL+EA+ LIE MP KP+  +W+
Sbjct: 669 AGLVEDGLKQFELMLRFG-IEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWR 727

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           +LLS C   G++EL     E+ +  D  +  ++ ++SNI+A  G W + +++R+  + +G
Sbjct: 728 SLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEG 787

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           + K  GRSW+E++KE+H F   D +H    +I++VL ++  +++  +  +
Sbjct: 788 VVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGHMKLI 837



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 275/548 (50%), Gaps = 41/548 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QL   LVK  F  D+ +   LID Y K G ++ A  VFD + E++ V+WT ++ G ++ G
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   L LF Q+   +V P+ + LST + A  +L  +E G QIH   ++ G E +  + N
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
            +ID Y KCGR+  A ++FD MP K++I+W  +++GY       + + LF  M + G  P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D F  +S L +C SL ++  GTQ+H + I +       + +  SL+D Y KC CL EAR+
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANL--GNDSYVTNSLIDMYAKCDCLTEARK 406

Query: 273 VFDLIEQKSVISWSSLILGYAQ---EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           VFD+     V+ ++++I GY++   +  L +A+ +F  +R R ++       S++   A 
Sbjct: 407 VFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASAS 466

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
              +   KQIH    K    LD    ++++ +Y  C  + ++  +F+EM VK++V W  +
Sbjct: 467 LTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526

Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL----- 444
            +GY +    +EA+ LF ++ L    PD   ++ +++A  +   ++  QE+  +L     
Sbjct: 527 FSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGL 586

Query: 445 -CND-----------KRMKPRIEH-------------YSCIVDSLGRAGRLDEAKNLIES 479
            CN            K   P   H             ++ ++ S    G   +A  ++E 
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEK 646

Query: 480 M---PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAG 534
           M    ++P+   +  +LSAC   G +E G +  E++LR  G  P   +YV M ++   AG
Sbjct: 647 MMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAG 705

Query: 535 SWNECERL 542
             NE   L
Sbjct: 706 RLNEAREL 713



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/424 (33%), Positives = 227/424 (53%), Gaps = 8/424 (1%)

Query: 12  RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           R+  A  L+  + +  L Y   +HG ++  G   D  L+N L+++Y++ G M  A  VF+
Sbjct: 44  RREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFE 103

Query: 72  KMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK-PNEFTLSTNIKASGVLSSVE 130
           KM ERN+V+W+ ++     +G  +  L +F     +    PNE+ LS+ I+A   L    
Sbjct: 104 KMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSG 163

Query: 131 NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
             M  Q+    +KS F+ +  VG  +ID Y K G I+ A  +FD +P KS +TW  MI+G
Sbjct: 164 RWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISG 223

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
            V  G S   L LF ++ E   +PD +  ++ L AC  L  + GG QIH  ++  G  + 
Sbjct: 224 CVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG--HE 281

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +   L+D YVKCG +  A ++FD +  K++ISW++L+ GY Q     EAMELF  +
Sbjct: 282 KDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSM 341

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            +  L+ D F  SS++   A    +E G Q+HAY  K   G D+ V+NS++DMY KC  +
Sbjct: 342 PKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKE---AVGLFRKMLLDDVEPDGVAYLAVL 425
            EA ++F+     +VV +  +I GY + G   E   A+ +F  M    + P  + ++++L
Sbjct: 402 TEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461

Query: 426 SACS 429
            A +
Sbjct: 462 RASA 465



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 460 IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDN 519
           +++   RAG +  A+ + E MP + ++  W T++SAC  HG  E    V     R   ++
Sbjct: 85  LMNLYSRAGGMVYARKVFEKMPER-NLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNS 143

Query: 520 PVNYVMMSNIHADAG 534
           P  Y++ S I A +G
Sbjct: 144 PNEYILSSFIQACSG 158


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/569 (34%), Positives = 327/569 (57%), Gaps = 2/569 (0%)

Query: 18  SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
           +L+ C+  + + +G  LHG  VK G    + +++ L+DMY K G+    C+VF+ M  RN
Sbjct: 157 ALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRN 216

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VVSWTA++ G +  G +   LS F +M  S V  +  T +  +KAS     +  G  IH 
Sbjct: 217 VVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHA 276

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
             +K GF     V N++  MYSKC + +   R+F  M    +++W  +I  YV  G  ++
Sbjct: 277 QTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEER 336

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            L  F++M++    P+E+TF S + AC +L     G QIHG  +  G   ++   ++ S+
Sbjct: 337 ALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALS--VSNSI 394

Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
           +  Y KCG L EA  VFD + +K +ISWS++I  Y Q  +  EA      +     + + 
Sbjct: 395 ITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNE 454

Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
           F L+S++ V    AL+E GKQ+HAYA  +    +T V ++++ MY + G + EA+++F+ 
Sbjct: 455 FALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDS 514

Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
           +   ++V+WT +I GY +HG ++EA+ LF  +    + PD V ++ +L+AC+H+GLV+  
Sbjct: 515 IKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLG 574

Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACR 497
             Y+  + N+ ++ P  EHY CI+D L RAGRL EA++++ +MP      +W TLL ACR
Sbjct: 575 FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACR 634

Query: 498 VHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGR 557
            HGDL+      E +LRL  ++   ++ ++NI++ +G   E   +RKL +SKG+ K  G 
Sbjct: 635 DHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGW 694

Query: 558 SWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
           SW+  + +++ F  G  +HPL+++I  +L
Sbjct: 695 SWINSNDQLNTFVAGVQSHPLSKQITTIL 723



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 233/452 (51%), Gaps = 7/452 (1%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSV 109
           N  +    K G++  A  +F+KM  R+ +SWT L+ G++   N+   L LF  M   S +
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           + ++F +S  +KA  +  +V  G  +HG  +KSG   +  V ++++DMY K G+  +   
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +F+ M  +++++W A+I G V AG S  GL  F +M       D  TF   LKA    G 
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G  IH   I  GF  +   V   +L   Y KC       R+F  +    V+SW++LI
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVV--NTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLI 325

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
           + Y Q  +   A++ F+++R+  +  + +  +S++   A+ A+ + G+QIH +A ++   
Sbjct: 326 MTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLV 385

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
              SVSNSI+ +Y KCGL+ EA+ +F+ M  K++++W+ II+ Y +   AKEA      M
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS-RLCNDKRMKPRIEHYSCIVDSLGRAG 468
             +  +P+  A  +VLS C    L+E  ++  +  LC     +  +  +S ++    R+G
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMV--HSALISMYSRSG 503

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
            L EA  + +S+     I  W  +++    HG
Sbjct: 504 NLQEASKIFDSIK-NNDIVSWTAMINGYAEHG 534



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 13/433 (3%)

Query: 11  ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
           +    A +L+  +++ LL YG  +H   +K GF+    + N L  MY+KC + +    +F
Sbjct: 251 DSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF 310

Query: 71  DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
            KM   +VVSWT L+  ++Q G+ +  L  F +M  S V PNE+T ++ I A   L+  +
Sbjct: 311 GKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITK 370

Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
            G QIHG  ++ G      V NSII +YSKCG + EA+ +FD M  K +I+W+ +I+ Y 
Sbjct: 371 WGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC 430

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
              ++ +       M   G  P+EF   S L  CGS+  +  G Q+H + +  G  +  +
Sbjct: 431 QGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDH--E 488

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
           T++  +L+  Y + G L EA ++FD I+   ++SW+++I GYA+     EA+ LF  +  
Sbjct: 489 TMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISS 548

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS----IVDMYLKCG 366
             L  D      ++       LV+ G     Y   + +    + S      I+D+  + G
Sbjct: 549 VGLMPDYVTFIGILTACNHAGLVDLG---FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAG 605

Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV-AYLAV 424
            + EA  +   MP   + V W+ ++     HG    A+    +ML   + P+   A++ +
Sbjct: 606 RLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQML--RLHPNSAGAHITL 663

Query: 425 LSACSHSGLVEES 437
            +  S SG  EE+
Sbjct: 664 ANIYSASGRREEA 676


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/549 (36%), Positives = 306/549 (55%), Gaps = 12/549 (2%)

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           WN + G      Y K G +  A ++FD MP +++ TWNAM+AG    G+ ++ L  F  M
Sbjct: 110 WNILFGG-----YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 164

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +  G  PDEF   S  + C  L  V  G Q+H +++ SG    +   +  SL   Y++CG
Sbjct: 165 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM--CVGSSLAHMYMRCG 222

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           CL E   V  ++   S++S +++I G  Q  +   A+E F  +R   +  D     S + 
Sbjct: 223 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 282

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +D A + QG+QIH    K        V   +V MY +CG + ++  +F      +   
Sbjct: 283 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 342

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            + +I+ YG HG  ++A+ LF++M+    EP  V +LA+L ACSHSGL EE  + F  + 
Sbjct: 343 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 402

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               M+P ++HY+C+VD LGR+G LDEA+ LI SMP+ P   IW+TLLSAC+   + ++ 
Sbjct: 403 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 462

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             + + ++ LD  +  +YV++SNI A +  W +   +RK  R   ++K  G SWVE+   
Sbjct: 463 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 522

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F  GD++HP  ++I + L EM  +++ + G+   +   LHD+++E KE SL  HSEK
Sbjct: 523 IHQFCTGDESHPRQKEIDECLEEMMAKIR-QCGYSPDMSMVLHDMEDEEKEVSLSHHSEK 581

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI  A     L+   G  IRV KNLRVC DCH  IK +S++     VVRD +RFH F+ 
Sbjct: 582 LAIAFAF----LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKD 637

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 638 GRCSCRDYW 646



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 170/350 (48%), Gaps = 6/350 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++M  N L   Y K G++ GA  +FD+M ERNV +W A++ G    G  +  L  F  M 
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 165

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              + P+EF L +  +    L  V  G Q+H   ++SG + +  VG+S+  MY +CG + 
Sbjct: 166 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E   +  ++P+ S+++ N +IAG    G S+  L  F  M+  G   D  TF S + +C 
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G QIHG ++ +G    V  +    LV  Y +CGCL ++ RVF           
Sbjct: 286 DLAALAQGQQIHGQVMKAGVDKVVPVMTC--LVHMYSRCGCLGDSERVFFGYCGSDTFLL 343

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I  Y    +  +A+ELF+Q+     +       +++   +   L E+G        K
Sbjct: 344 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 403

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
              G+  SV +   +VD+  + G +DEA  L   MP+  + V W  +++ 
Sbjct: 404 T-YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 4/298 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L    RCC+    +  G Q+H  +V+ G   D+ + + L  MY +CG +    AV   + 
Sbjct: 176 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VS   ++ G  QNG+++  L  FC M S  V  +  T  + I +   L+++  G Q
Sbjct: 236 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 295

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  MK+G +    V   ++ MYS+CG + ++ R+F           +AMI+ Y   G+
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 355

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
             K + LF++M   G  P + TF + L AC   G    G      +  T G   SVK   
Sbjct: 356 GQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYT 415

Query: 254 AGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              +VD   + GCL EA   +  +      + W +L+     ++N   A  + +++ E
Sbjct: 416 C--VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 471



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 162/392 (41%), Gaps = 71/392 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F+   +AC +L  +    Q+H F  TSG   +     A  L+  Y   G L  AR +F+ 
Sbjct: 47  FSHLFRACRALRPL---RQLHAFAATSG--AATDRFTANHLMLAYADLGDLTAARELFER 101

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS------------------------ 312
           I +++V+SW+ L  GY +  +L  A +LF ++ ER+                        
Sbjct: 102 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 161

Query: 313 -------LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  +  D F L S+    A    V  G+Q+HAY  +     D  V +S+  MY++C
Sbjct: 162 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 221

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G + E   +   +P  ++V+   II G  ++G ++ A+  F  M    V  D V +++ +
Sbjct: 222 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 281

Query: 426 SACSHSGLVEESQEYFSRLCN---DK---RMKPRIEHYS---CIVDS------------- 463
           S+CS    + + Q+   ++     DK    M   +  YS   C+ DS             
Sbjct: 282 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 341

Query: 464 --------LGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
                    G  G   +A  L + M     +PS   +  LL AC   G  E G +  E++
Sbjct: 342 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 401

Query: 513 LRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
            +  G  P   +Y  + ++   +G  +E E L
Sbjct: 402 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEAL 433


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/559 (35%), Positives = 319/559 (57%), Gaps = 4/559 (0%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           QLH  ++K  F  DL+  N LI MY K  +M  A  VF +++ ++++SW +++ GF Q G
Sbjct: 220 QLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG 279

Query: 93  NAKACLSLFCQMGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
                L  F +M S SV +PNEF   +   A   L   + G QIHG+C+K G   +   G
Sbjct: 280 YELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG 339

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
            S+ DMY+KCG +  A  +F  +    L+ WNA+IAG+     + +    F +M+  G +
Sbjct: 340 CSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLV 399

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           P++ T  S L AC     +  G Q+H +++  GF   +   +  SL+  Y KC  L +A 
Sbjct: 400 PNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP--VCNSLLSMYSKCSNLNDAL 457

Query: 272 RVFDLIEQKS-VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           +VF+ I  K+ ++SW++L+    Q+    E + L + +    ++ D   L++++      
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A  E G QIH +  K    LD SVSN++++MY KCG ++ A ++F+ +   ++++W+ +I
Sbjct: 518 ASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLI 577

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
            GY + G  KEA  LFR M    V+P+ + ++ +L+ACSH G+VEE  + +  +  D R+
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
            P  EH SC+VD L RAG LD A++ I  MP  P + +W+TLL+AC+VHG+LE+G+   E
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE 697

Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
            +L++D  N    VM+ NIHA +G W +  RLR   R   + KV G+SW+E+  ++H F 
Sbjct: 698 NVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFL 757

Query: 571 GGDDTHPLTEKIHQVLMEM 589
             D+ HP   KI+ +L E+
Sbjct: 758 AEDNLHPERGKIYTMLEEL 776



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 252/502 (50%), Gaps = 11/502 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           +  CS    L++G ++H  ++   +  D++L N ++ MY KCG +  A  +FD M  +NV
Sbjct: 105 INACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNV 164

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT+++ G+ + G     ++L+ QM  S   P+ FT  + +K+   L   +   Q+H  
Sbjct: 165 VSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAH 224

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  + +  N++I MY+K  ++ +A  +F  +  K LI+W +MIAG+   GY  + 
Sbjct: 225 VLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEA 284

Query: 199 LLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG-S 256
           L  FR+M       P+EF F S   AC  L     G QIHG  I  G       + AG S
Sbjct: 285 LCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG---SDLFAGCS 341

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           L D Y KCG L  AR VF  IE+  +++W+++I G+A   N  E+   F Q+R   L  +
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   ++  ++  G Q+H+Y  K+   LD  V NS++ MY KC  +++A ++F 
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
           ++  K ++V+W  ++T   +   A E + L + M    ++PD V    VL +       E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
              +    +     +   I   + +++   + G L+ A+ + +S+   P I  W +L+  
Sbjct: 522 VGSQIHCFIMKSG-LNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579

Query: 496 CRVHGDLELGREVGEILLRLDG 517
              +     G+E  E+   + G
Sbjct: 580 ---YAQAGCGKEAFELFRTMRG 598



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 199/400 (49%), Gaps = 10/400 (2%)

Query: 100 LFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYS 159
           +F +  SS +K    T +  I A   L S+E+G +IH   +   ++ + ++ N I+ MY 
Sbjct: 87  IFQKCSSSPLK--SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144

Query: 160 KCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTS 219
           KCG + EA  MFD MP K++++W +MI+GY   G  D  + L+ +M   G IPD FTF S
Sbjct: 145 KCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGS 204

Query: 220 TLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ 279
            +K+C  L       Q+H  ++ S F      +   +L+  Y K   + +A  VF  I  
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEF--GADLIAQNALISMYTKFSQMADAINVFSRIII 262

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLRERSL-QVDGFVLSSMMGVFADFALVEQGKQ 338
           K +ISW S+I G++Q     EA+  FR++  +S+ Q + FV  S     +     + G+Q
Sbjct: 263 KDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQ 322

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           IH    K   G D     S+ DMY KCG ++ A  +F  +   ++V W  II G+     
Sbjct: 323 IHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSN 382

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYS 458
           AKE+   F +M    + P+ V  L++L ACS   ++    +  S +    +M   ++   
Sbjct: 383 AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIV---KMGFNLDIPV 439

Query: 459 C--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
           C  ++    +   L++A  + E +  K  I  W TLL+AC
Sbjct: 440 CNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 4/173 (2%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGF 88
           + G Q+H  ++K G + D+ ++N LI+MY KCG +  A  +FD +   +++SW++L+ G+
Sbjct: 521 EVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGY 580

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP 148
            Q G  K    LF  M    VKPNE T    + A   +  VE G++++   M+  +  +P
Sbjct: 581 AQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRT-MQEDYRISP 639

Query: 149 VVGN--SIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKG 198
              +   ++D+ ++ G ++ A      MP    ++ W  ++A   + G  + G
Sbjct: 640 TKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVG 692


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/600 (36%), Positives = 338/600 (56%), Gaps = 83/600 (13%)

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY-------------------- 189
           VGN+++DMY+KCG++ +A+++F+ M  K ++TWNAM+ GY                    
Sbjct: 76  VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEK 135

Query: 190 ----------VLAGYSDKG-----LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
                     V++GY+ +G     + +FR+M      P+  T  S L AC S+G++  G 
Sbjct: 136 IELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGK 195

Query: 235 QIHGFLITSGFPYSVKTVIAG-------------SLVDFYVKCGCLVEARRVFDLI--EQ 279
           + H         YSVK ++ G             +L+D Y KC  L  AR +FD I  + 
Sbjct: 196 ETHC--------YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKD 247

Query: 280 KSVISWSSLILGYAQEENLAEAMELFRQLR--ERSLQVDGFVLSSMMGVFADFALVEQGK 337
           + V++W+ +I GYAQ  +   A++LF ++   +  +  + F +S ++   A  A ++ GK
Sbjct: 248 RDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGK 307

Query: 338 QIHAYAAKVPSGLDTSV---SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           QIHAY  +  S +D+ V   +N ++DMY K G +D A  +F+ M  +N V+WT ++TGYG
Sbjct: 308 QIHAYVLR-RSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYG 366

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
            HG A         ++LD     G+ +L VL ACSHSG+V+   + F R+  D  + P +
Sbjct: 367 MHGAA---------LVLD-----GITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGV 412

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
           EHY+C+ D  GRAGRL EA  LI  M ++P+  +W  LLSACR H + EL     + LL 
Sbjct: 413 EHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLE 472

Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
           L  DN   Y ++SNI+A+A  W +  R+R L +  G+KK  G SWV+  K +  FY GD 
Sbjct: 473 LKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDR 532

Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVR 634
           TH  ++KI++ L ++ KR+K  +G+V    ++LHD+ +E K + L  HSEKLA+  A+  
Sbjct: 533 THLQSQKIYETLADLIKRIK-AIGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAI-- 589

Query: 635 GGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             L   PG  IR+ KNLR+CGD H  I  +S I++   ++RD++RFH+F+ G CSC  YW
Sbjct: 590 --LTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 196/428 (45%), Gaps = 70/428 (16%)

Query: 47  LMLNNDLIDMYAKCGEMNGACAVFDKM--------------------------------- 73
             + N L+DMYAKCG+M  A  VF++M                                 
Sbjct: 74  FFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE 133

Query: 74  --LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
             +E +VV+W++++ G+ Q G     + +F QM     +PN  TL + + A   + ++ +
Sbjct: 134 EKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLH 193

Query: 132 GMQIHGMCMKSGF----EWNP-----VVGNSIIDMYSKCGRINEAARMFD-VMPA-KSLI 180
           G + H  C    F    E N       V N++IDMY+KC  +  A  MFD + P  + ++
Sbjct: 194 GKETH--CYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVV 251

Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           TW  MI GY   G ++  L LF +M   ++  +P++FT +  L AC  L ++  G QIH 
Sbjct: 252 TWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHA 311

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
           +++      S    +A  L+D Y K G +  A+ VFD + +++ +SW+SL+ GY      
Sbjct: 312 YVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYG----- 366

Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK---VPSGLDTSVS 355
                    +   +L +DG     ++   +   +V++G  +    +K   V  G++    
Sbjct: 367 ---------MHGAALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYA- 416

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
             + D++ + G + EAT L N+M ++   V W  +++    H   + A    +K+L    
Sbjct: 417 -CMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKA 475

Query: 415 EPDGVAYL 422
           + DG   L
Sbjct: 476 DNDGTYTL 483



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 172/369 (46%), Gaps = 71/369 (19%)

Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQE-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
           ++WN++++ Y      +  + LFR+M   +G +PD     + L   G LG   G      
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFFVGN----- 78

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
                            +LVD Y KCG + +A +VF+ +  K V++W++++ GY+Q    
Sbjct: 79  -----------------ALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRF 121

Query: 299 AEAMELFRQLRERSLQVD--------------GF---------------------VLSSM 323
            +A+ LF ++RE  +++D              GF                      L S+
Sbjct: 122 EDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSL 181

Query: 324 MGVFADFALVEQGKQIHAYAAKV-------PSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
           +   A    +  GK+ H Y+ K            D +V N+++DMY KC  ++ A  +F+
Sbjct: 182 LSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFD 241

Query: 377 EMPVK--NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLAVLSACSHSG 432
           E+  K  +VVTWTV+I GY +HG A  A+ LF +M   D  + P+      VL AC+   
Sbjct: 242 EICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLA 301

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYS-CIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
            ++  ++  + +    R+   +   + C++D   ++G +D A+ + +SM  + +++ W +
Sbjct: 302 ALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS-WTS 360

Query: 492 LLSACRVHG 500
           LL+   +HG
Sbjct: 361 LLTGYGMHG 369



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 20/175 (11%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           L  C++   L +G Q+H  +++     S  L + N LIDMY+K G+++ A  VFD M +R
Sbjct: 294 LMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR 353

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N VSWT+L+ G+  +G   A L L           +  T    + A      V+ G+ + 
Sbjct: 354 NAVSWTSLLTGYGMHG---AALVL-----------DGITFLVVLYACSHSGMVDRGIDLF 399

Query: 137 GMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
              M   F  +P V +   + D++ + GR+ EA R+ + M  + + + W A+++ 
Sbjct: 400 YR-MSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSA 453


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/549 (36%), Positives = 306/549 (55%), Gaps = 12/549 (2%)

Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
           WN + G      Y K G +  A ++FD MP +++ TWNAM+AG    G+ ++ L  F  M
Sbjct: 172 WNILFGG-----YIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 226

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
           +  G  PDEF   S  + C  L  V  G Q+H +++ SG    +   +  SL   Y++CG
Sbjct: 227 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM--CVGSSLAHMYMRCG 284

Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
           CL E   V  ++   S++S +++I G  Q  +   A+E F  +R   +  D     S + 
Sbjct: 285 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 344

Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
             +D A + QG+QIH    K        V   +V MY +CG + ++  +F      +   
Sbjct: 345 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 404

Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            + +I+ YG HG  ++A+ LF++M+    EP  V +LA+L ACSHSGL EE  + F  + 
Sbjct: 405 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 464

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
               M+P ++HY+C+VD LGR+G LDEA+ LI SMP+ P   IW+TLLSAC+   + ++ 
Sbjct: 465 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 524

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
             + + ++ LD  +  +YV++SNI A +  W +   +RK  R   ++K  G SWVE+   
Sbjct: 525 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 584

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           IH F  GD++HP  ++I + L EM  +++ + G+   +   LHD+++E KE SL  HSEK
Sbjct: 585 IHQFCTGDESHPRQKEIDECLEEMMAKIR-QCGYSPDMSMVLHDMEDEEKEVSLSHHSEK 643

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LAI  A     L+   G  IRV KNLRVC DCH  IK +S++     VVRD +RFH F+ 
Sbjct: 644 LAIAFAF----LSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKD 699

Query: 686 GVCSCGDYW 694
           G CSC DYW
Sbjct: 700 GRCSCRDYW 708



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 170/350 (48%), Gaps = 6/350 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++M  N L   Y K G++ GA  +FD+M ERNV +W A++ G    G  +  L  F  M 
Sbjct: 168 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 227

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              + P+EF L +  +    L  V  G Q+H   ++SG + +  VG+S+  MY +CG + 
Sbjct: 228 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 287

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E   +  ++P+ S+++ N +IAG    G S+  L  F  M+  G   D  TF S + +C 
Sbjct: 288 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 347

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G QIHG ++ +G    V  +    LV  Y +CGCL ++ RVF           
Sbjct: 348 DLAALAQGQQIHGQVMKAGVDKVVPVMTC--LVHMYSRCGCLGDSERVFFGYCGSDTFLL 405

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I  Y    +  +A+ELF+Q+     +       +++   +   L E+G        K
Sbjct: 406 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 465

Query: 346 VPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
              G+  SV +   +VD+  + G +DEA  L   MP+  + V W  +++ 
Sbjct: 466 T-YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 4/298 (1%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L    RCC+    +  G Q+H  +V+ G   D+ + + L  MY +CG +    AV   + 
Sbjct: 238 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 297

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++VS   ++ G  QNG+++  L  FC M S  V  +  T  + I +   L+++  G Q
Sbjct: 298 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 357

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  MK+G +    V   ++ MYS+CG + ++ R+F           +AMI+ Y   G+
Sbjct: 358 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 417

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
             K + LF++M   G  P + TF + L AC   G    G      +  T G   SVK   
Sbjct: 418 GQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYT 477

Query: 254 AGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
              +VD   + GCL EA   +  +      + W +L+     ++N   A  + +++ E
Sbjct: 478 C--VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 533



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 162/392 (41%), Gaps = 71/392 (18%)

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F+   +AC +L  +    Q+H F  TSG   +     A  L+  Y   G L  AR +F+ 
Sbjct: 109 FSHLFRACRALRPL---RQLHAFAATSG--AATDRFTANHLMLAYADLGDLTAARELFER 163

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS------------------------ 312
           I +++V+SW+ L  GY +  +L  A +LF ++ ER+                        
Sbjct: 164 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 223

Query: 313 -------LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
                  +  D F L S+    A    V  G+Q+HAY  +     D  V +S+  MY++C
Sbjct: 224 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 283

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G + E   +   +P  ++V+   II G  ++G ++ A+  F  M    V  D V +++ +
Sbjct: 284 GCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAI 343

Query: 426 SACSHSGLVEESQEYFSRLCN---DK---RMKPRIEHYS---CIVDS------------- 463
           S+CS    + + Q+   ++     DK    M   +  YS   C+ DS             
Sbjct: 344 SSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTF 403

Query: 464 --------LGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
                    G  G   +A  L + M     +PS   +  LL AC   G  E G +  E++
Sbjct: 404 LLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELM 463

Query: 513 LRLDGDNPV--NYVMMSNIHADAGSWNECERL 542
            +  G  P   +Y  + ++   +G  +E E L
Sbjct: 464 TKTYGMQPSVKHYTCVVDLLGRSGCLDEAEAL 495


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/587 (34%), Positives = 333/587 (56%), Gaps = 6/587 (1%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +V +   L+ +++ C     +  G  +H  ++  GFS    +N  L+ MYAK G +  +C
Sbjct: 160 IVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSC 219

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            VF+ +  RN VSW A++ GF+ NG      + F +M    ++PN     +  KA G L 
Sbjct: 220 KVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLG 279

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF--DVMPAKSLITWNAM 185
            VE G  I+ +  + G + N  VG ++IDM++KCG + E+  +F  +       + WNAM
Sbjct: 280 DVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAM 339

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           I+G+ ++G+ ++ +LLF +M ++    D +T+ STL +   + S+    Q+HG +  SG 
Sbjct: 340 ISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG- 398

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             S+   +  +L+D Y KCG L   R++FD  E+ + ISW++L+  Y+Q     +A+ +F
Sbjct: 399 --SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVF 456

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
            Q+RE   Q +    S ++   A    +E G+Q+H+   K     D  V + ++DMY KC
Sbjct: 457 SQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKC 516

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G + +A ++F  +   +V++WT +I+GY +HG+AK+A+ LFRKM L    P+   +L +L
Sbjct: 517 GSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLL 576

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
            ACSH GLV+E   YF  +     + P IEHY+C+VD LGR GRL EA   I  MP++P 
Sbjct: 577 FACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPD 636

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             +W TLL ACRVHG+++L +   + +L  + D+    V++SN + +AG+      +R +
Sbjct: 637 EKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNM 696

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL-MEMEK 591
            +S+ ++K  G SW+ +  +IH F  GD  HP  + I++ L + MEK
Sbjct: 697 MKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVLMEK 743



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 247/488 (50%), Gaps = 15/488 (3%)

Query: 34  LHGALVKMGF---SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           +HG ++K      S  +MLN  L+  Y+KC +   A  VFD++ +++V SWT LM G  +
Sbjct: 83  IHGFVIKFQLIEKSLTVMLNQ-LVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATE 141

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG  +  +  F ++    + P+E+ LS  I+A   + S+  G  +H   +  GF     V
Sbjct: 142 NGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFV 201

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
             S++ MY+K GRI ++ ++F+ +  ++ ++WNAMI+G+V  G   +    F +M     
Sbjct: 202 NTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEI 261

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P+   F S  KA G LG V  G  I+      G   ++   +  +L+D + KCGC+ E+
Sbjct: 262 RPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIH--VGTALIDMFAKCGCVTES 319

Query: 271 RRVF--DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
             VF  +       + W+++I G+    +  EAM LF ++ + +++ D +   S +   A
Sbjct: 320 WSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIA 379

Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           D   +E  KQ+H    K  S +  S+ N+++D Y KCG +D   +LF+     N ++WT 
Sbjct: 380 DMRSLEYVKQLHGMIWKSGS-IGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTT 438

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++T Y +    ++A+ +F +M     +P+ V +  VL++C+    +E  Q+  S  C   
Sbjct: 439 LVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTG 498

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLEL 504
             + +    S ++D   + G + +A  + ES+   P +  W  ++S    HG     LEL
Sbjct: 499 FARDKCVE-SVLIDMYAKCGSVRDAIKVFESLK-DPDVISWTAMISGYAQHGMAKDALEL 556

Query: 505 GREVGEIL 512
            R++  +L
Sbjct: 557 FRKMELVL 564


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/658 (33%), Positives = 365/658 (55%), Gaps = 39/658 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+    L +G  +HG ++++G  FDL   N L++MY+K          F  + E  V
Sbjct: 17  LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK----------FWSLEEGGV 66

Query: 79  VSW--TALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLS-TNIKASGVLSSVENGM-Q 134
             +  + ++ G  +      C        +S   P E       I  +G L+ + N + Q
Sbjct: 67  QRFCDSKMLGGIPEPREIGKC-------SNSHDLPCELDERVAGIDQNGDLNQMSNILYQ 119

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGR----INEAARMFDVMPAKSLITWNAMIAGYV 190
           ++    K  F+          D+YSK  +    +    ++F++MP + +++WN +I+G  
Sbjct: 120 VN--TYKKVFD-----EGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNA 172

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G  +  L++ R+M      PD FT +S L       ++  G +IHG+ I +G  Y   
Sbjct: 173 QNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG--YDAD 230

Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
             I  SL+D Y KC  + ++ RVF ++ Q   ISW+S+I G  Q     E ++ F+Q+  
Sbjct: 231 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI 290

Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
             ++ +    SS+M   A    +  GKQ+H Y  +     +  +++++VDMY KCG I  
Sbjct: 291 AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRT 350

Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
           A  +F++M + ++V+WT +I GY  HG A +A+ LF++M ++ V+P+ VA++AVL+ACSH
Sbjct: 351 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 410

Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
           +GLV+E+ +YF+ +  D R+ P +EHY+ + D LGR GRL+EA   I  M ++P+ ++W 
Sbjct: 411 AGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWS 470

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
           TLL+ACRVH ++EL  +V + L  +D  N   YV++SNI++ AG W +  +LR   R KG
Sbjct: 471 TLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKG 530

Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
           +KK    SW+E+  ++H F  GD +HP  ++I++ L  + ++M+ E G+V      LHD+
Sbjct: 531 MKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE-GYVLDTTEVLHDV 589

Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           +EE K   L  HSE+LAI   ++    +   G  IRV KNLRVC DCH   K +SKI+
Sbjct: 590 EEEQKRYLLCSHSERLAITFGII----STPAGTTIRVTKNLRVCVDCHTATKFISKIV 643



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 17/192 (8%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N VSFS +         +  C+    L  G QLHG +++  F  ++ + + L+DMYAKCG
Sbjct: 296 NHVSFSSI---------MPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG 346

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FDKM   ++VSWTA++ G+  +G+A   +SLF +M    VKPN       + 
Sbjct: 347 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 406

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM---PA 176
           A      V+   +     M   +   P + +  ++ D+  + GR+ EA      M   P 
Sbjct: 407 ACSHAGLVDEAWKYFN-SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPT 465

Query: 177 KSLITWNAMIAG 188
            S+  W+ ++A 
Sbjct: 466 GSV--WSTLLAA 475


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/675 (33%), Positives = 361/675 (53%), Gaps = 23/675 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF----DKMLERNVVSWTALMCGFL 89
           +HG +V  G   +  +   L+D Y K G ++ A  VF    D+    ++V+ +A++    
Sbjct: 270 IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACW 329

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS--SVENGMQIHGMCMKSGFEWN 147
           QNG  +  L LF  M     KP+  TL + + A  +L   S    +    M + S    N
Sbjct: 330 QNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDN 389

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            V+G +++  Y++   +  A   FD + +  +++WNAM A Y+    S + L+LF +M  
Sbjct: 390 -VLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLL 448

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            G  P   TF + L AC +         G +I   L  +G      T +A + ++ Y KC
Sbjct: 449 EGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL--EGDTAVANATLNMYAKC 506

Query: 265 GCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLS 321
           G L +AR VF+ I   ++  I+W+S++  Y       EA ELF+ +  E+ ++ +     
Sbjct: 507 GSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 566

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV- 380
           +++        + QG++IHA         DT + N++++MY KCG +D+A  +F++    
Sbjct: 567 AVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSN 626

Query: 381 -KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++V+ WT +I GY ++G A+ A+ LF  M    V P+ V +++ L+AC+H G +E+  E
Sbjct: 627 QEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCE 686

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             S +  D  + P  +H+SCIVD LGR GRLDEA+ L+E    +  +  W  LL AC+  
Sbjct: 687 LLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNS 745

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            +LE G    E +++LD +   +Y+++++++A AG WNE   +RK    KG++   G S 
Sbjct: 746 KELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSA 805

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           VEV++E+H F  GD +HP +E+I+  L  +   +K   G+V      LHD+ +E KE  L
Sbjct: 806 VEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAA-GYVADTGLVLHDVSQEHKERLL 864

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLAI   L    ++   G  +RV KNLRVC DCH   K +SK+     ++RD++R
Sbjct: 865 MRHSEKLAIAFGL----MSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSR 920

Query: 680 FHRFEGGVCSCGDYW 694
           +H F  G CSCGDYW
Sbjct: 921 YHHFTSGTCSCGDYW 935



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 253/533 (47%), Gaps = 43/533 (8%)

Query: 19  LRCCSKNLLLDYGVQLHGALV--KMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           L+ C +   L  G +LH  ++  ++       L +DLI M+AKCG +  A A+ D+    
Sbjct: 50  LQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA-- 107

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           +V S TA++  ++++G     + LF +M    V+PN   L   + A   L ++  G +IH
Sbjct: 108 SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGRRIH 164

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS---LITWNAMIAGYVLAG 193
                  FE N V+GN++I MYSKCG + +A + FD +P  S   ++TWNAMI+ ++  G
Sbjct: 165 SQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNG 224

Query: 194 YSDKGLLLFRKMQEHG-EIPDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVK 250
            + + L LFR M   G   P+  TF S L +C   G  S+     IHG ++ +G     +
Sbjct: 225 SAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER--E 282

Query: 251 TVIAGSLVDFYVKCGCLVEARRVF----DLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
             +  +LVD Y K G L +A  VF    D     S+++ S++I    Q     E++ LF 
Sbjct: 283 AFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFF 342

Query: 307 QLRERSLQVDGFVL------SSMMGVFADFALV-EQGKQIHAYAAKVPSGLDTSVSNSIV 359
            +     +  G  L       SM+ V +  A V EQ  ++      V +  D  +  +++
Sbjct: 343 AMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEV------VSATRDNVLGTTLL 396

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
             Y +   +  A   F+ +   +VV+W  +   Y +H  ++EA+ LF +MLL+ V P   
Sbjct: 397 TTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVA 456

Query: 420 AYLAVLSACSHSGLVEESQ--EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            ++  L+AC+       S   +    L  +  ++      +  ++   + G L +A+ + 
Sbjct: 457 TFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVF 516

Query: 478 ESM-PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGD-----NPVNYV 524
           E + P +     W ++L+A   HG   LG+E  E+   ++ +     N V +V
Sbjct: 517 ERISPARRDCITWNSMLAAYGHHG---LGKEAFELFQAMEAEKLVKPNKVTFV 566



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 165/325 (50%), Gaps = 16/325 (4%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T+   L+ACG L ++  G ++H  +++        + +A  L+  + KCG L EA  + D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
                SV S +++I  + +     +AMELF ++  R    +   L +++   +    +  
Sbjct: 105 RF--ASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRP---NCHALIALVNACSCLGNLAA 159

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP---VKNVVTWTVIITG 392
           G++IH+  +      ++ + N+++ MY KCG + +A + F+ +P    ++VVTW  +I+ 
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 393 YGKHGLAKEAVGLFRKMLLDDV-EPDGVAYLAVLSACSHSGL--VEESQEYFSRLCNDKR 449
           + ++G A+EA+ LFR M  D    P+ V +++VL +C  +GL  +E+ +    R+     
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEA-KNLIESMPVKPSIAI--WQTLLSACRVHGDLELGR 506
            +      + +VDS G+ G LD+A +  +     +PS ++     ++SAC  +G  +   
Sbjct: 280 EREAFVR-TALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHA 531
            +    + L+G  P    ++S ++A
Sbjct: 339 RLF-FAMNLEGTKPSGVTLVSVLNA 362



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGF 88
           G ++H  +V  GF  D ++ N L++MYAKCG ++ A A+FDK    + +V++WT+L+ G+
Sbjct: 581 GREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGY 640

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEWN 147
            Q G A+  L LF  M    V+PN  T  + + A      +E G + + GM    G    
Sbjct: 641 AQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPA 700

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
               + I+D+  +CGR++EA ++ +      +ITW A++
Sbjct: 701 SKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 739


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/586 (35%), Positives = 322/586 (54%), Gaps = 10/586 (1%)

Query: 111 PNEFTLSTNIK-ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           P+  T    +K AS +   +  G Q+H   +K     NP V  S++ +Y++CG ++ A R
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD MP  S ++W A+I  Y+ AG   + + + R    +G  PD FT    L AC  +  
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G  +       G   SV   +A + VD YVKCG + +AR VFD +  K  ++W +++
Sbjct: 235 LATGETVWRAAEQEGIAQSV--FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 292

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GYA   +  EA++LF  ++   ++ D + ++  +        ++ G+Q           
Sbjct: 293 GGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEF 351

Query: 350 LDTSV-SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
           LD  V   +++DMY KCG   EA  +F +M  K+++ W  +I G G  G  K A  L  +
Sbjct: 352 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 411

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M    V+ +   ++ +L +C+H+GL+++ + YF  +     + PRIEHY CIVD L RAG
Sbjct: 412 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 471

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            L EA  LI+ MP+  +  I   LL  C++H + EL   V   L+RL+  N  NYVM+SN
Sbjct: 472 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSN 531

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+++ G W +  +LR   + KG++KV   SWVE + ++H F  GD +HPL+++I++ L E
Sbjct: 532 IYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 591

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +   MK  +G+    +  + D+++E KE +L  HSEKLAI   L+  G    PG+ IRV 
Sbjct: 592 LGLEMK-TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTG----PGETIRVT 646

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +S+I     +VRD  RFH F  G CSC DYW
Sbjct: 647 KNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G QLH   +K+    +  +   L+ +YA+CG ++ A  VFD+M   + VSWTAL+  
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           ++  G+ +  + +     ++ ++P+ FT    + A   ++ +  G  +     + G   +
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V  + +D+Y KCG + +A  +FD M  K  + W AM+ GY   G+  + L LF  MQ 
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD +     L AC  LG++  G Q     +     +    V+  +L+D Y KCG  
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGST 371

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA  VF  + +K +I W+++ILG     +   A  L  Q+ +  ++++      ++   
Sbjct: 372 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 431

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
               L++ G++      K+   +   + +   IVD+  + GL+ EA +L ++MP+  N V
Sbjct: 432 THTGLIQDGRRYFHNMTKL-YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 490

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKML 410
               ++ G   H  A+ A  +  +++
Sbjct: 491 ILGALLGGCKIHRNAELAEHVLTQLI 516



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 3/258 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +  A  + G +  + +    +D+Y KCGEM  A  VFDKM +++ 
Sbjct: 226 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 285

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G+  NG+ +  L LF  M +  V+P+ + ++  + A   L +++ G Q   M
Sbjct: 286 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 345

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                F  NPV+G ++IDMY+KCG   EA  +F  M  K +I WNAMI G  + G+    
Sbjct: 346 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 405

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSL 257
             L  +M++ G   ++ TF   L +C   G +  G +  H   +T  +  S +    G +
Sbjct: 406 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN--MTKLYHISPRIEHYGCI 463

Query: 258 VDFYVKCGCLVEARRVFD 275
           VD   + G L EA ++ D
Sbjct: 464 VDLLSRAGLLQEAHQLID 481


>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/574 (36%), Positives = 324/574 (56%), Gaps = 12/574 (2%)

Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY--SKCGRINEAARMFDVMPAKSLITWNA 184
           +S+    Q H + +++    NP+  + +I     S  G +N A ++F  M        N 
Sbjct: 22  TSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNT 81

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           MI GY  +    + + L+  M E G   D +T+   L AC  LG+V  G + H  ++ +G
Sbjct: 82  MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
           F   +   +  +L+ FY  CG    A  VFD    + V++W+ +I  +  +    +A +L
Sbjct: 142 FGSDL--FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199

Query: 305 FRQLRE-RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA---KVPSGLDTSVSNSIVD 360
             ++ +  +L+ D   + S++   A    +E+GK +H+Y+    K     D  +  ++VD
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVD 259

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG ID A ++F  M V+NV TW  +I G   HG  ++A+ LF +M  D + PD V 
Sbjct: 260 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 319

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           ++A+L ACSH+GLV+E    F  + N  +++PR+EHY C+VD L RA ++D+A   IE+M
Sbjct: 320 FIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 379

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P+K +  +W TLL ACR  G  +L  ++G  ++ L+ D+   YVM+SN++A    W+   
Sbjct: 380 PIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHAL 439

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           +LRK  ++KG++K  G SW+E++  IH F  GD +H  TE+I+ ++ EM +R+  + G V
Sbjct: 440 KLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHV 499

Query: 601 YGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEF 660
            G    L DI+EE KE SL +HSEKLAI L L+    +   G  IR+ KNLRVC DCH F
Sbjct: 500 PGTANVLFDIEEEEKEHSLFLHSEKLAIALGLI----STPSGSPIRIVKNLRVCNDCHSF 555

Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +K  SK+     V RD +RFH F+ G CSC D+W
Sbjct: 556 LKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 12/402 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q H  L++     + + ++ LI   A    G++N A  +F +M   +      ++ G+ +
Sbjct: 29  QAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYAR 88

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + N    +SL+  M    V  + +T    + A   L +V+ G + H   +K+GF  +  V
Sbjct: 89  SQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFV 148

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N++I  Y  CG    A  +FD    + ++TWN MI  ++  G S+K   L  +M +   
Sbjct: 149 INALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208

Query: 211 I-PDEFTFTSTLKACGSLGSVGGGTQIHGFLIT-SGFPYSVKTVIAGSLVDFYVKCGCLV 268
           + PDE T  S + AC  LG++  G  +H +      F  +   V+  +LVD Y KCG + 
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSID 268

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
            A +VF  +  ++V +W++LI G A   +  +A+ LF Q+    L  D     +++   +
Sbjct: 269 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 328

Query: 329 DFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTW 386
              LV++G     A   K            +VD+  +   +D+A      MP+K N V W
Sbjct: 329 HAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLW 388

Query: 387 TVIITG--YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
             ++     G H    E +G  R+++  ++EPD      +LS
Sbjct: 389 ATLLGACRSGGHFDLAEKIG--RRVI--ELEPDSCGRYVMLS 426



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 18/282 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   +  G + H  ++K GF  DL + N LI  Y  CG    AC VFD+   R+V
Sbjct: 118 LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDV 177

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           V+W  ++   L  G ++    L  +M    +++P+E T+ + + A   L ++E G  +H 
Sbjct: 178 VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHS 237

Query: 138 MCMK-SGFEWNP--VVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
              +   FE N   V+  +++DMY+KCG I+ A ++F  M  +++ TWNA+I G  + G+
Sbjct: 238 YSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGH 297

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
            +  + LF +M+    +PD+ TF + L AC   G V  G  +    + + F    +    
Sbjct: 298 GEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHY 356

Query: 255 GSLVDFYVKCGCLVEARRVFD---LIEQKSV----ISWSSLI 289
           G +VD       L  AR+V D    IE   +    + W++L+
Sbjct: 357 GCVVDL------LCRARKVDDALAFIENMPIKANSVLWATLL 392



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 19/220 (8%)

Query: 5   SFSLVSERQRLADSLR-----------CCSKNLLLDYGVQLHG---ALVKMGFSFDLMLN 50
           +F L+ E  +L D+LR            C++   L+ G  LH     L K   + DL+L 
Sbjct: 196 AFDLLDEMTKL-DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLE 254

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
             L+DMYAKCG ++ A  VF +M  RNV +W AL+ G   +G+ +  +SLF QM    + 
Sbjct: 255 TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLM 314

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAA 168
           P++ T    + A      V+ G+ +    MK+ F+  P + +   ++D+  +  ++++A 
Sbjct: 315 PDDVTFIALLCACSHAGLVDEGLAMF-QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 373

Query: 169 RMFDVMPAKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
              + MP K+  + W  ++      G+ D    + R++ E
Sbjct: 374 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE 413


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/614 (35%), Positives = 331/614 (53%), Gaps = 37/614 (6%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  L+ C+    L  G QLH   +K  F  D ++    +DMYAKC  M  A  +FD    
Sbjct: 286 ASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSEN 345

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N+ S+ A++ G+ Q  N    L LF ++  SS+  +E +LS  ++A   +  +  G+Q+
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL 405

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           HG+  KS F  N  V N+ IDMY KC  ++EA R+FD M  K  ++WNA+IA +      
Sbjct: 406 HGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEER 465

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF---PYSVKTV 252
            K L +   M   G  PDE+TF S LKAC    S+  G +IH  ++  G    PY     
Sbjct: 466 SKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPY----- 519

Query: 253 IAGSLVDFYVKCGCLVEARRVFDLI---------------------------EQKSVISW 285
           I  SLVD Y KCG + EA ++ + I                            Q+ ++SW
Sbjct: 520 IGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSW 579

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           +++I GY   +   +A   F ++ E  +  D F  S+++   A+ A +  GKQIHA+  K
Sbjct: 580 NAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIK 639

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
                D  + +++VDMY KCG + ++  +F + P+++ VTW  +I GY  HG+ +EA+ L
Sbjct: 640 KELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKL 699

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M+L ++ P+   ++++L AC+H GLVE   +YF  +  +  + PR+EHYS +VD LG
Sbjct: 700 FESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILG 759

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH-GDLELGREVGEILLRLDGDNPVNYV 524
           ++G +++A  LI+ MP +    IW+TLLSAC+++  ++E        LLRLD  +   Y+
Sbjct: 760 KSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYI 819

Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
           ++SNI+ADAG W++   LR   RS  LKK  G SWVE+  E H F  GD  HP  ++I+ 
Sbjct: 820 LLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYN 879

Query: 585 VLMEMEKRMKEELG 598
            L  +   M   +G
Sbjct: 880 GLALIYNEMNLSVG 893



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 257/487 (52%), Gaps = 37/487 (7%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           C+K    + G Q H  ++  GF   + ++N L+ +Y  CG +  A  +FD M  R+VVSW
Sbjct: 59  CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118

Query: 82  TAL-------------------------------MCGFLQNGNAKACLSLFCQMGSSSVK 110
            A+                               + GFLQ G     + +F +MG S V+
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVE 178

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            +  + S  +K   +L + + G QIHG+ ++ G++ + V G++++DMY+KC R++E+  +
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  MP K+ I+W+A+IAG V   + D GL +F++MQ+ G    +  + S LK+C +L  +
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDL 298

Query: 231 GGGTQIHGFLITSGFPYSVKT-VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
             GTQ+H   + S F   VK  ++  + +D Y KC  + +A+R+FD+ E  ++ S++++I
Sbjct: 299 RLGTQLHAHALKSDF---VKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMI 355

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GY+Q++N   A+ LFR+L + SL  D   LS  +   A    + +G Q+H  A K    
Sbjct: 356 TGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFS 415

Query: 350 LDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
            +  V+N+ +DMY KC  +DEA  +F+EM  K+ V+W  II  + ++    + + +   M
Sbjct: 416 RNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSM 475

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
           L   +EPD   + +VL AC+   L    + + + +       P I   S +VD   + G 
Sbjct: 476 LRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIG--SSLVDMYSKCGM 533

Query: 470 LDEAKNL 476
           +DEA+ +
Sbjct: 534 IDEAEKI 540



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 260/511 (50%), Gaps = 36/511 (7%)

Query: 19  LRCCSKNLLLDY--GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           L+ CS  +L +Y  G Q+HG  ++MG+  D++  + L+DMYAKC  ++ +  VF  M ++
Sbjct: 188 LKVCS--ILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQK 245

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
           N +SW+A++ G +QN      L +F +M    V  ++   ++ +K+   L  +  G Q+H
Sbjct: 246 NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLH 305

Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
              +KS F  + +V  + +DMY+KC  + +A R+FD+    +L ++NAMI GY       
Sbjct: 306 AHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGF 365

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
           + LLLFRK+ +     DE + +  L+AC ++  +  G Q+HG    S F  ++   +A +
Sbjct: 366 RALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNI--CVANA 423

Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
            +D Y KC  L EA RVFD + +K  +SW+++I  + Q E  ++ + +   +    ++ D
Sbjct: 424 FIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPD 483

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
            +   S++   A  +L   G +IH    K+    +  + +S+VDMY KCG+IDEA ++ N
Sbjct: 484 EYTFGSVLKACAGDSL-NHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHN 542

Query: 377 EMPV---------------------------KNVVTWTVIITGYGKHGLAKEAVGLFRKM 409
           ++ +                           + +V+W  II+GY     +++A   F +M
Sbjct: 543 KIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRM 602

Query: 410 LLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGR 469
           +   + PD   Y  VL  C++   +   ++  + +   K ++  +   S +VD   + G 
Sbjct: 603 MEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIK-KELQYDVYICSTLVDMYSKCGN 661

Query: 470 LDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
           L +++ + E  P++  +  W  ++     HG
Sbjct: 662 LHDSRLMFEKAPIRDFVT-WNAMICGYAHHG 691



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 241/467 (51%), Gaps = 34/467 (7%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+ +LR C+    L  G+QLHG   K  FS ++ + N  IDMY KC  ++ AC VFD+M 
Sbjct: 386 LSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMG 445

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ VSW A++    QN      L++   M  S ++P+E+T  + +KA     S+ +GM+
Sbjct: 446 RKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGME 504

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF----------------------- 171
           IH   +K G   NP +G+S++DMYSKCG I+EA ++                        
Sbjct: 505 IHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEP 564

Query: 172 ----DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
               D    + +++WNA+I+GYV+   S+     F +M E G  PD+FT+++ L  C +L
Sbjct: 565 KGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANL 624

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            S+G G QIH  +I     Y V   I  +LVD Y KCG L ++R +F+    +  ++W++
Sbjct: 625 ASIGLGKQIHAHVIKKELQYDV--YICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNA 682

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
           +I GYA      EA++LF  +   ++  +     S++   A   LVE+G   + +  K  
Sbjct: 683 MICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLD-YFHMMKKE 741

Query: 348 SGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVG 404
            GLD  + +  ++VD+  K G +++A EL  EMP + + V W  +++    +    EA  
Sbjct: 742 YGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAE 801

Query: 405 LFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
           +    LL     D   Y+ + +  + +G+ +++ E  + + +DK  K
Sbjct: 802 VAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKK 848



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 200/439 (45%), Gaps = 42/439 (9%)

Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
           E G Q H   + SGF     V N ++ +Y  CG +  A ++FD MP + +++WNAMI GY
Sbjct: 66  ELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGY 125

Query: 190 --------------------------VLAGYSDKG-----LLLFRKMQEHGEIPDEFTFT 218
                                     +L+G+   G     + +F +M   G   D  +F+
Sbjct: 126 AASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFS 185

Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIE 278
             LK C  L +   GTQIHG  +  G  Y    V   +L+D Y KC  L E+  VF  + 
Sbjct: 186 VILKVCSILENYKLGTQIHGIALRMG--YDTDVVSGSALLDMYAKCKRLDESFTVFYAMP 243

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ 338
           QK+ ISWS++I G  Q   L   +++F+++++  + V   + +S++   A    +  G Q
Sbjct: 244 QKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQ 303

Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
           +HA+A K     D  V  + +DMY KC  + +A  LF+     N+ ++  +ITGY +   
Sbjct: 304 LHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDN 363

Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPRIEHY 457
              A+ LFRK+    +  D ++    L AC+   GL E  Q     L         I   
Sbjct: 364 GFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQ--LHGLATKSNFSRNICVA 421

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL-- 515
           +  +D  G+   LDEA  + + M  K +++ W  +++A   H   E   +   IL+ +  
Sbjct: 422 NAFIDMYGKCEALDEACRVFDEMGRKDAVS-WNAIIAA---HEQNEERSKTLNILVSMLR 477

Query: 516 DGDNPVNYVMMSNIHADAG 534
            G  P  Y   S + A AG
Sbjct: 478 SGMEPDEYTFGSVLKACAG 496



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 33/245 (13%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
            F+   K C    +   G Q H  +I SGF  +V   ++  L+  Y+ CG L  A ++FD
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTV--FVSNCLLQLYINCGNLGYATKLFD 108

Query: 276 LIEQKSVISWSSLILGYAQEENLA-------------------------------EAMEL 304
            +  + V+SW+++I GYA   ++                                E++++
Sbjct: 109 GMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKV 168

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           F ++    ++ D    S ++ V +     + G QIH  A ++    D    ++++DMY K
Sbjct: 169 FIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAK 228

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
           C  +DE+  +F  MP KN ++W+ II G  ++      + +F++M    V      Y +V
Sbjct: 229 CKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASV 288

Query: 425 LSACS 429
           L +C+
Sbjct: 289 LKSCA 293


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/567 (35%), Positives = 324/567 (57%), Gaps = 8/567 (1%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           + N  Q+H   + SG   +  +   +I +    G I  A R+F  +P      +++++  
Sbjct: 40  LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
               G+S   +L +R+M   G     +TFTS +KAC  L ++  G +IH  ++  G  Y 
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCG--YG 157

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +  +L+  Y K   +  A++VFD + Q+++I+W+SLI GY Q     E++ LF  +
Sbjct: 158 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 217

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            E   Q D   + S++   +    ++ G  +H YA      L+  +  S+++MY +CG +
Sbjct: 218 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 277

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            +A E+F+ M  +NVVTWT +I+GYG HG  ++A+ LF +M      P+ + ++AVLSAC
Sbjct: 278 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 337

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES-MPVKPSIA 487
           +HSGL+++ +  FS +     + P +EH  C+VD  GRAG L++A   I+  +P +P  A
Sbjct: 338 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 397

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W ++L ACR+H + +LG +V E +L ++ +NP +YVM+SNI+A AG  +  E +R +  
Sbjct: 398 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 457

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            + LKK  G S +E++++ + F  GD +HP T  I++ L E+  R  E  G+V   +  +
Sbjct: 458 RRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSES-GYVPAPESLM 516

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD++EE ++ +LR HSEKLA+   L    L    G+ IR+ KNLR+C DCH  IK +S I
Sbjct: 517 HDLEEEERDYALRYHSEKLALAFGL----LKTNQGETIRIVKNLRICEDCHSAIKHISII 572

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD  RFH F+ G CSC DYW
Sbjct: 573 ADREIIVRDKFRFHHFKDGSCSCLDYW 599



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 199/398 (50%), Gaps = 9/398 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++  G      L   LI +    G +  A  +F  +   +   + +L+    + G
Sbjct: 45  QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 104

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   +  + +M  S    + +T ++ IKA   LS++  G +IH   M  G+  +  V  
Sbjct: 105 FSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQA 164

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++I +Y+K   +  A ++FD MP +++I WN++I+GY   G   + + LF  M E G  P
Sbjct: 165 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 224

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L +C  LG++  G  +H +   +GF  +V  V+  SL++ Y +CG + +AR 
Sbjct: 225 DSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNV--VLGTSLINMYTRCGNVSKARE 282

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +++++V++W+++I GY       +AMELF ++R    + +     +++   A   L
Sbjct: 283 VFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGL 342

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSI--VDMYLKCGLIDEATELFNEMPVKN--VVTWTV 388
           ++ G+++ + + K   GL   V +++  VDM+ + GL+++A +   +   K      WT 
Sbjct: 343 IDDGRRVFS-SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 401

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++     H      V +   +L   VEP+   +  +LS
Sbjct: 402 MLGACRMHRNFDLGVKVAEHVL--SVEPENPGHYVMLS 437



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 151/278 (54%), Gaps = 13/278 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    L  G ++H  ++  G+  D+ +   LI +YAK  +M  A  VFD M +R +
Sbjct: 132 IKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTI 191

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W +L+ G+ QNG  +  + LF  M  S  +P+  T+ + + +   L +++ G  +H  
Sbjct: 192 IAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDY 251

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              +GF+ N V+G S+I+MY++CG +++A  +FD M  ++++TW AMI+GY + GY  + 
Sbjct: 252 ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQA 311

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSVKTVI 253
           + LF +M+ +G  P+  TF + L AC   G +  G ++       + +  G  ++V    
Sbjct: 312 MELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV---- 367

Query: 254 AGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLI 289
              +VD + + G L +A +     + ++     W+S++
Sbjct: 368 --CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 403


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/569 (34%), Positives = 319/569 (56%), Gaps = 2/569 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L +GVQLH   VK G   ++ + N L+ MYAKC  ++    +F  M   ++V+W  ++ G
Sbjct: 263 LFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            +QNG     L LFC M  S ++P+  TL + + A   L+    G ++HG  +++    +
Sbjct: 323 CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD 382

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             + ++++D+Y KC  +  A  ++D   A  ++  + MI+GYVL G S + + +FR + E
Sbjct: 383 VFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P+     S L AC S+ ++  G ++H + + +   Y  +  +  +L+D Y KCG L
Sbjct: 443 QGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA--YEGRCYVESALMDMYAKCGRL 500

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             +  +F  I  K  ++W+S+I  +AQ     EA+ LFR++    ++     +SS++   
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A    +  GK+IH    K P   D    ++++DMY KCG ++ A  +F  MP KN V+W 
Sbjct: 561 ASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWN 620

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II  YG +GL KE+V L R M  +  + D V +LA++SAC+H+G V+E    F  +  +
Sbjct: 621 SIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEE 680

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            ++ PR+EH++C+VD   RAG+LD+A  LI  MP KP   IW  LL ACRVH ++EL   
Sbjct: 681 YQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEI 740

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + L +LD  N   YV+MSNI+A AG W+   ++R+L +   ++K+ G SWV+V+   H
Sbjct: 741 ASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSH 800

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            F   D +HP +E I+  L  +   ++EE
Sbjct: 801 LFVAADKSHPDSEDIYMSLKSILLELREE 829



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    +  G  +H     +G   D+ + + LI MYA  G +  A  VFD M ER+ 
Sbjct: 153 VKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDC 212

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  +M G+++ G+  + + LF  M +S  +PN  TL+  +  S   S +  G+Q+H +
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTL 272

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    V N+++ MY+KC  +++  ++F +MP   L+TWN MI+G V  G+ D+ 
Sbjct: 273 AVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQA 332

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF  MQ+ G  PD  T  S L A   L     G ++HG+++ +     V  V A  LV
Sbjct: 333 LLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSA--LV 390

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A+ V+D  +   V+  S++I GY       EA+++FR L E+ ++ +  
Sbjct: 391 DIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAV 450

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  A ++ G+++H+YA K        V ++++DMY KCG +D +  +F+++
Sbjct: 451 AIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKI 510

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ VTW  +I+ + ++G  +EA+ LFR+M ++ V+   V   +VLSAC+    +   +
Sbjct: 511 SAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGK 570

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E    +     ++  +   S ++D  G+ G L+ A  + ESMP K  ++ W +++++   
Sbjct: 571 EIHGVVIKGP-IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGA 628

Query: 499 HG----DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +G     + L R + E   + D    V ++ + +  A AG   E  RL
Sbjct: 629 YGLVKESVSLLRHMQEEGFKADH---VTFLALVSACAHAGQVQEGLRL 673



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 242/499 (48%), Gaps = 14/499 (2%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           +RL   LR C     L  G+Q+HG  V  G  + D  L   L+ MY        A AVF 
Sbjct: 40  RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99

Query: 72  KMLERNVVS----WTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNIKASGV 125
             L R   +    W  L+ G    G+ ++ L  + +M +  S+  P+  T    +K+   
Sbjct: 100 S-LPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAA 158

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L ++  G  +H      G + +  VG+++I MY+  G + +A ++FD M  +  + WN M
Sbjct: 159 LGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           + GYV AG     + LF  M+  G  P+  T    L    +   +  G Q+H   +  G 
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGL 278

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   +A +LV  Y KC CL +  ++F L+ +  +++W+ +I G  Q   + +A+ LF
Sbjct: 279 ESEV--AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             +++  ++ D   L S++    D     QGK++H Y  +    +D  + +++VD+Y KC
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
             +  A  +++     +VV  + +I+GY  +G+++EAV +FR +L   + P+ VA  +VL
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 426 SACSHSGLVEESQEYFS-RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            AC+    ++  QE  S  L N    +  +E  S ++D   + GRLD +  +   +  K 
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 485 SIAIWQTLLSACRVHGDLE 503
            +  W +++S+   +G+ E
Sbjct: 515 EVT-WNSMISSFAQNGEPE 532



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    +  G +LH   +K  +     + + L+DMYAKCG ++ +  +F K+ 
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ V+W +++  F QNG  +  L+LF +M    VK +  T+S+ + A   L ++  G +
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+ +K     +    +++IDMY KCG +  A R+F+ MP K+ ++WN++IA Y   G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + L R MQE G   D  TF + + AC   G V  G ++    +T  +  + +    
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFR-CMTEEYQIAPRMEHF 690

Query: 255 GSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEEN--LAE--AMELFR 306
             +VD Y + G L +A   + D+  +     W +L+       N  LAE  + ELF+
Sbjct: 691 ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/586 (35%), Positives = 322/586 (54%), Gaps = 10/586 (1%)

Query: 111 PNEFTLSTNIK-ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAAR 169
           P+  T    +K AS +   +  G Q+H   +K     NP V  S++ +Y++CG ++ A R
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 170 MFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS 229
           +FD MP  S ++W A+I  Y+ AG   + + + R    +G  PD FT    L AC  +  
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187

Query: 230 VGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLI 289
           +  G  +       G   SV   +A + VD YVKCG + +AR VFD +  K  ++W +++
Sbjct: 188 LATGETVWRAAEQEGIAQSV--FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMV 245

Query: 290 LGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSG 349
            GYA   +  EA++LF  ++   ++ D + ++  +        ++ G+Q           
Sbjct: 246 GGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-IRMVDWDEF 304

Query: 350 LDTSV-SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRK 408
           LD  V   +++DMY KCG   EA  +F +M  K+++ W  +I G G  G  K A  L  +
Sbjct: 305 LDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQ 364

Query: 409 MLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAG 468
           M    V+ +   ++ +L +C+H+GL+++ + YF  +     + PRIEHY CIVD L RAG
Sbjct: 365 MEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAG 424

Query: 469 RLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSN 528
            L EA  LI+ MP+  +  I   LL  C++H + EL   V   L+RL+  N  NYVM+SN
Sbjct: 425 LLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSN 484

Query: 529 IHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLME 588
           I+++ G W +  +LR   + KG++KV   SWVE + ++H F  GD +HPL+++I++ L E
Sbjct: 485 IYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDE 544

Query: 589 MEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVF 648
           +   MK  +G+    +  + D+++E KE +L  HSEKLAI   L+  G    PG+ IRV 
Sbjct: 545 LGLEMK-TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTG----PGETIRVT 599

Query: 649 KNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KNLRVC DCH  IK +S+I     +VRD  RFH F  G CSC DYW
Sbjct: 600 KNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 185/386 (47%), Gaps = 6/386 (1%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G QLH   +K+    +  +   L+ +YA+CG ++ A  VFD+M   + VSWTAL+  
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
           ++  G+ +  + +     ++ ++P+ FT    + A   ++ +  G  +     + G   +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             V  + +D+Y KCG + +A  +FD M  K  + W AM+ GY   G+  + L LF  MQ 
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  PD +     L AC  LG++  G Q     +     +    V+  +L+D Y KCG  
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQ--AIRMVDWDEFLDNPVLGTALIDMYAKCGST 324

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            EA  VF  + +K +I W+++ILG     +   A  L  Q+ +  ++++      ++   
Sbjct: 325 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 384

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
               L++ G++      K+   +   + +   IVD+  + GL+ EA +L ++MP+  N V
Sbjct: 385 THTGLIQDGRRYFHNMTKL-YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 443

Query: 385 TWTVIITGYGKHGLAKEAVGLFRKML 410
               ++ G   H  A+ A  +  +++
Sbjct: 444 ILGALLGGCKIHRNAELAEHVLTQLI 469



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 3/258 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C++   L  G  +  A  + G +  + +    +D+Y KCGEM  A  VFDKM +++ 
Sbjct: 179 LTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDA 238

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V+W A++ G+  NG+ +  L LF  M +  V+P+ + ++  + A   L +++ G Q   M
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRM 298

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                F  NPV+G ++IDMY+KCG   EA  +F  M  K +I WNAMI G  + G+    
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTA 358

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ-IHGFLITSGFPYSVKTVIAGSL 257
             L  +M++ G   ++ TF   L +C   G +  G +  H   +T  +  S +    G +
Sbjct: 359 FTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN--MTKLYHISPRIEHYGCI 416

Query: 258 VDFYVKCGCLVEARRVFD 275
           VD   + G L EA ++ D
Sbjct: 417 VDLLSRAGLLQEAHQLID 434


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/567 (35%), Positives = 324/567 (57%), Gaps = 8/567 (1%)

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           + N  Q+H   + SG   +  +   +I +    G I  A R+F  +P      +++++  
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
               G+S   +L +R+M   G     +TFTS +KAC  L ++  G +IH  ++  G  Y 
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCG--YG 221

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
               +  +L+  Y K   +  A++VFD + Q+++I+W+SLI GY Q     E++ LF  +
Sbjct: 222 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 281

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
            E   Q D   + S++   +    ++ G  +H YA      L+  +  S+++MY +CG +
Sbjct: 282 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 341

Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
            +A E+F+ M  +NVVTWT +I+GYG HG  ++A+ LF +M      P+ + ++AVLSAC
Sbjct: 342 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 401

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES-MPVKPSIA 487
           +HSGL+++ +  FS +     + P +EH  C+VD  GRAG L++A   I+  +P +P  A
Sbjct: 402 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 461

Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
           +W ++L ACR+H + +LG +V E +L ++ +NP +YVM+SNI+A AG  +  E +R +  
Sbjct: 462 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 521

Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
            + LKK  G S +E++++ + F  GD +HP T  I++ L E+  R  E  G+V   +  +
Sbjct: 522 RRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSES-GYVPAPESLM 580

Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
           HD++EE ++ +LR HSEKLA+   L    L    G+ IR+ KNLR+C DCH  IK +S I
Sbjct: 581 HDLEEEERDYALRYHSEKLALAFGL----LKTNQGETIRIVKNLRICEDCHSAIKHISII 636

Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
                +VRD  RFH F+ G CSC DYW
Sbjct: 637 ADREIIVRDKFRFHHFKDGSCSCLDYW 663



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 199/398 (50%), Gaps = 9/398 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           Q+H  ++  G      L   LI +    G +  A  +F  +   +   + +L+    + G
Sbjct: 109 QVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFG 168

Query: 93  NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
            +   +  + +M  S    + +T ++ IKA   LS++  G +IH   M  G+  +  V  
Sbjct: 169 FSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQA 228

Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
           ++I +Y+K   +  A ++FD MP +++I WN++I+GY   G   + + LF  M E G  P
Sbjct: 229 ALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQP 288

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D  T  S L +C  LG++  G  +H +   +GF  +V  V+  SL++ Y +CG + +AR 
Sbjct: 289 DSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNV--VLGTSLINMYTRCGNVSKARE 346

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           VFD +++++V++W+++I GY       +AMELF ++R    + +     +++   A   L
Sbjct: 347 VFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGL 406

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSI--VDMYLKCGLIDEATELFNEMPVKN--VVTWTV 388
           ++ G+++ + + K   GL   V +++  VDM+ + GL+++A +   +   K      WT 
Sbjct: 407 IDDGRRVFS-SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTS 465

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           ++     H      V +   +L   VEP+   +  +LS
Sbjct: 466 MLGACRMHRNFDLGVKVAEHVL--SVEPENPGHYVMLS 501



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 151/278 (54%), Gaps = 13/278 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    L  G ++H  ++  G+  D+ +   LI +YAK  +M  A  VFD M +R +
Sbjct: 196 IKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTI 255

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++W +L+ G+ QNG  +  + LF  M  S  +P+  T+ + + +   L +++ G  +H  
Sbjct: 256 IAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDY 315

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
              +GF+ N V+G S+I+MY++CG +++A  +FD M  ++++TW AMI+GY + GY  + 
Sbjct: 316 ADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQA 375

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI-----HGFLITSGFPYSVKTVI 253
           + LF +M+ +G  P+  TF + L AC   G +  G ++       + +  G  ++V    
Sbjct: 376 MELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNV---- 431

Query: 254 AGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLI 289
              +VD + + G L +A +     + ++     W+S++
Sbjct: 432 --CMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 467


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/536 (37%), Positives = 321/536 (59%), Gaps = 9/536 (1%)

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           GM  H   ++ G   + +  N +++MYSKCG +  A ++FD MP +SL++WN M+  +  
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G S+K L+LF +MQ+ G    EFT +S + AC +   V    Q+HGF + +    +V  
Sbjct: 126 NGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNV-- 183

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
            +  +L+D Y KCG + +A  VF+ + ++S ++WSS++ GY Q E   EA+ LF + +  
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
            L+ + F +SS +   A  A + +GKQ+ A   K   G +  V +S++DMY KCG+I+EA
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
             +F+ +  KNVV W  +++G+ +H  + EA+  F KM    + P+ + Y++VL+ACSH 
Sbjct: 304 YIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHL 363

Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
           GLVE+ ++YF  +     + P + HYSC+VD LGRAG L EAK+LI+ MP   + ++W +
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGS 423

Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
           LL++CR++ +LE      + L  ++  N  N+V++SNI+A    W E  R R L +    
Sbjct: 424 LLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKA 483

Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
           KK  G+SW+E+  ++H F  G+  HP   +I+  L ++   MK ++G+    ++ LHD++
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK-KIGYKAKTEHDLHDVE 542

Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQP-GKVIRVFKNLRVCGDCHEFIKGLSK 666
           E  K+E LR HSEKLA+       G+   P G  IR+ KNLR+CGDCH F+K  S+
Sbjct: 543 ESRKQELLRHHSEKLALTF-----GIMVLPHGAPIRIMKNLRICGDCHSFMKLASR 593



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 212/375 (56%), Gaps = 12/375 (3%)

Query: 9   VSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA 68
           VSE Q L   L+  ++N     G+  H  ++++G   D + +N L++MY+KCG +  A  
Sbjct: 47  VSELQHL---LQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 103

Query: 69  VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           +FD+M  R++VSW  ++    QNG+++  L LF QM    +  +EFT+S+ + A      
Sbjct: 104 LFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCC 163

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
           V    Q+HG  +K+  + N  VG +++D+Y+KCG + +A+ +F+ MP +S +TW++M+AG
Sbjct: 164 VFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAG 223

Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
           YV     ++ L+LF + Q  G   ++FT +S L AC +  ++  G Q+   L  +G   +
Sbjct: 224 YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSN 283

Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
           +   +  SL+D Y KCG + EA  VF  +E+K+V+ W++++ G+++     EAM  F ++
Sbjct: 284 I--FVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKM 341

Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV----PSGLDTSVSNSIVDMYLK 364
           ++  +  +     S++   +   LVE+G++      +V    P+ L  S    +VD+  +
Sbjct: 342 QQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSC---MVDILGR 398

Query: 365 CGLIDEATELFNEMP 379
            GL+ EA +L + MP
Sbjct: 399 AGLLHEAKDLIDRMP 413



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 85/160 (53%), Gaps = 2/160 (1%)

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
           +G   HA   +V    DT  SN +++MY KCGL++ A +LF+EMPV+++V+W  ++  + 
Sbjct: 65  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
           ++G +++A+ LF +M  + +        +V+ AC+    V E ++          +   +
Sbjct: 125 QNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHG-FALKTALDSNV 183

Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
              + ++D   + G + +A  + E MP +  +  W ++++
Sbjct: 184 FVGTALLDVYAKCGLVKDASLVFECMPERSDVT-WSSMVA 222


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 328/607 (54%), Gaps = 12/607 (1%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N V+F+ V         L  C+   +LD G QLHG  V  G   D  + N L+ MY+KC 
Sbjct: 158 NSVTFACV---------LSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQ 208

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
            +  A  +FD + + ++VSW  ++ G++QNG       LF  M S+ +KP+  T ++ + 
Sbjct: 209 CLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLP 268

Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
               L S+++  +IHG  ++     +  + +++ID+Y KC  +  A +      +   + 
Sbjct: 269 CVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVV 328

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
              MI+GYVL G + + L  FR + +    P   TF+S   A   L ++  G ++HG +I
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
            +      K  +  +++D Y KCG L  A RVF+ I +K  I W+S+I   +Q     EA
Sbjct: 389 KTKL--DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446

Query: 302 MELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
           + LFRQ+     + D   +S  +   A+   +  GK+IH    K P   D    +S++DM
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDM 506

Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           Y KCG ++ +  +F+ M  KN V+W  II+ YG HG  KE + LF +ML + ++PD V +
Sbjct: 507 YAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTF 566

Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
           L ++SAC H+G V+E   Y+  +  +  +  R+EHY+C+ D  GRAGRL EA   I SMP
Sbjct: 567 LGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMP 626

Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
             P   +W TLL AC +HG++EL     + L  LD  N   YV+++N+ A AG W +  +
Sbjct: 627 FPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLK 686

Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
           +R + + +G++KV G SW+EV+   H F   D +HPLT +I+ VL  +   +K+E G+V 
Sbjct: 687 VRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKE-GYVP 745

Query: 602 GVKYALH 608
            +   +H
Sbjct: 746 QLYLPMH 752



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 258/517 (49%), Gaps = 7/517 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           G  +H  +  MG   D+ + + LI +YA+ G ++ A  +FD + +++ V W  ++ G+++
Sbjct: 77  GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVK 136

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           NG++   + +F +M  S +KPN  T +  +      + ++ G Q+HG+ +  G E +  V
Sbjct: 137 NGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPV 196

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            N+++ MYSKC  +  A ++FD +P   L++WN +I+GYV  G   +   LFR M   G 
Sbjct: 197 ANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGI 256

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD  TF S L     L S+    +IHG++I       V   +  +L+D Y KC  +  A
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV--FLKSALIDIYFKCRDVEMA 314

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
           ++          +  +++I GY       EA+E FR L +  ++      SS+   FA  
Sbjct: 315 QKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374

Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
           A +  GK++H    K        V ++I+DMY KCG +D A  +FN +  K+ + W  +I
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMI 434

Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
           T   ++G   EA+ LFR+M ++    D V+    LSAC++   +   +E    +     +
Sbjct: 435 TSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGP-L 493

Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
           +  +   S ++D   + G L+ ++ + + M  K  ++ W +++SA   HGDL+    +  
Sbjct: 494 RSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVS-WNSIISAYGNHGDLKECLALFH 552

Query: 511 ILLRLDGDNPVNYVMMSNIHA--DAGSWNECERLRKL 545
            +LR +G  P +   +  I A   AG  +E  R   L
Sbjct: 553 EMLR-NGIQPDHVTFLGIISACGHAGQVDEGIRYYHL 588



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 232/466 (49%), Gaps = 10/466 (2%)

Query: 56  MYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT 115
           MY + G +  A  +F  +      +W  ++ GF   G     L  + +M  + V P+++T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
               +KA   L SV+ G  +H      G + +  VG+S+I +Y++ G +++A  +FD +P
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGT 234
            K  + WN M+ GYV  G S   + +F +M+ H EI P+  TF   L  C S   +  GT
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           Q+HG  +  G    + + +A +L+  Y KC CL  AR++FD + Q  ++SW+ +I GY Q
Sbjct: 180 QLHGIAVGCGL--ELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
              + EA  LFR +    ++ D    +S +    +   ++  K+IH Y  +    LD  +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 355 SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV 414
            ++++D+Y KC  ++ A +   +    + V  T +I+GY  +G  KEA+  FR ++ + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 415 EPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAK 474
           +P  V + ++  A +    +   +E    +   K +  +    S I+D   + GRLD A 
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 475 NLIESMPVKPSIAIWQTLLSACRVHGD----LELGREVGEILLRLD 516
            +   +  K +I  W +++++C  +G     + L R++G    R D
Sbjct: 417 RVFNRITEKDAIC-WNSMITSCSQNGRPGEAINLFRQMGMEGTRYD 461


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/519 (38%), Positives = 310/519 (59%), Gaps = 9/519 (1%)

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQI 236
           ++  WN +I GY   G S     L+R+M+  G + PD  T+   +KA  ++  V  G  I
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  +I SGF   +   +  SL+  Y  CG +  A +VFD + +K +++W+S+I G+A+  
Sbjct: 144 HSVVIRSGFGSLI--YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 201

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              EA+ L+ ++  + ++ DGF + S++   A    +  GK++H Y  KV    +   SN
Sbjct: 202 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVE 415
            ++D+Y +CG ++EA  LF+EM  KN V+WT +I G   +G  KEA+ LF+ M   + + 
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P  + ++ +L ACSH G+V+E  EYF R+  + +++PRIEH+ C+VD L RAG++ +A  
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            I+SMP++P++ IW+TLL AC VHGD +L       +L+L+ ++  +YV++SN++A    
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 441

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           W++ +++RK     G+KKV G S VEV   +H F  GD +HP ++ I+  L EM  R++ 
Sbjct: 442 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 501

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCG 655
           E G+V  +     D++EE KE ++  HSEK+AI   L+       P   I V KNLRVC 
Sbjct: 502 E-GYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP-ERSP---ITVVKNLRVCA 556

Query: 656 DCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           DCH  IK +SK+     VVRD +RFH F+ G CSC DYW
Sbjct: 557 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 212/423 (50%), Gaps = 30/423 (7%)

Query: 25  NLLLDYGV-------QLHGALVKMGFSF-DLMLNNDLIDMYAKCGE---MNGACAVFDKM 73
           NLL  YGV       Q+H   ++ G S  D  L   LI           M+ A  VF K+
Sbjct: 20  NLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI 79

Query: 74  LER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVEN 131
            +  NV  W  L+ G+ + GN+ +  SL+ +M  S  V+P+  T    IKA   ++ V  
Sbjct: 80  EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRL 139

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  IH + ++SGF     V NS++ +Y+ CG +  A ++FD MP K L+ WN++I G+  
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  ++ L L+ +M   G  PD FT  S L AC  +G++  G ++H ++I  G   ++ +
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
             +  L+D Y +CG + EA+ +FD +  K+ +SW+SLI+G A      EA+ELF+ +   
Sbjct: 260 --SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME-- 315

Query: 312 SLQVDGFVLSSMMGVFADFA-----LVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
               +G +   +  V   +A     +V++G + +    +    ++  + +   +VD+  +
Sbjct: 316 --STEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLAR 372

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
            G + +A E    MP++ NVV W  ++     HG     +  F ++ +  +EP+      
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNHSGDYV 430

Query: 424 VLS 426
           +LS
Sbjct: 431 LLS 433



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 103/192 (53%), Gaps = 7/192 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+K   L  G ++H  ++K+G + +L  +N L+D+YA+CG +  A  +FD+M+++N 
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHG 137
           VSWT+L+ G   NG  K  + LF  M S+  + P E T    + A      V+ G + + 
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YF 347

Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGY 194
             M+  ++  P + +   ++D+ ++ G++ +A      MP + +++ W  ++    + G 
Sbjct: 348 RRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 407

Query: 195 SDKGLLLFRKMQ 206
           SD  L  F ++Q
Sbjct: 408 SD--LAEFARIQ 417


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/695 (32%), Positives = 350/695 (50%), Gaps = 74/695 (10%)

Query: 66  ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK--AS 123
           A ++FD+M     +  TAL   F  +      + L+ +M    V P+ FT     K  A 
Sbjct: 56  ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR 115

Query: 124 GVLSSVENGMQIHGMCMKSGFEWN-PVVGNSIIDMYSKCGRINEAARMFD---------- 172
           G  + V  G  +H  C ++      P++ + II MY++ G   +A R FD          
Sbjct: 116 GG-AHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAW 174

Query: 173 ---------------------VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
                                  P ++++TW  +I+GY  AG + + +  F  M   G  
Sbjct: 175 TTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIA 234

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PDE T    L ACG L  +  G  +H  +       S K V+A  L+D Y KCG    AR
Sbjct: 235 PDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVA--LIDMYAKCGDTGRAR 292

Query: 272 RVFDLI--------------------------------EQKSVISWSSLILGYAQEENLA 299
            VFD +                                E   VI+++SLI GY     L 
Sbjct: 293 EVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLR 352

Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIV 359
           EA+ LF ++R   L  D F +  ++   A    + QG+ +HA   +     D  +  +++
Sbjct: 353 EALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALL 412

Query: 360 DMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGV 419
           DMY+KCG ++EA   F +M V++V TW+ +I G   +G+ K A+  F  M  D    + V
Sbjct: 413 DMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSV 472

Query: 420 AYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIES 479
            Y+AVL+ACSHS L++E + YF  +     ++P+IEHY C++D LGR+G LDEA +L+++
Sbjct: 473 TYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQT 532

Query: 480 MPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNEC 539
           MP++P+  IW ++LSACRVH +++L +     LL+L+      YV M NI+ D+  W + 
Sbjct: 533 MPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDA 592

Query: 540 ERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGF 599
            ++R+L   +G+KK AG S + V  ++H F  GD +HP   +I  ++ E+ +R+K   G+
Sbjct: 593 SKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSA-GY 651

Query: 600 VYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
                    D+ EE KE++L  HSEKLAI   LV    +  P   + + KNLRVC DCH 
Sbjct: 652 SPITSQITVDVDEEEKEQALLAHSEKLAIAFGLV----SLAPNLPVHIIKNLRVCEDCHS 707

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            IK +S++     +VRD +RFH F GGVCSC D+W
Sbjct: 708 AIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 177/386 (45%), Gaps = 38/386 (9%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++    +I   AK G ++ A  +  +   RNVV+WT L+ G+ + G A   +  F  M 
Sbjct: 170 DVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM----------------------CMKSG 143
           S  + P+E T+   + A G L  +  G  +H +                      C  +G
Sbjct: 230 SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTG 289

Query: 144 -----FEW-----NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
                F+       P   N++ID Y K G ++ A  +FD M    +IT+N++I GY+  G
Sbjct: 290 RAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGG 349

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
              + LLLF KM+ HG   D FT    L A  SLG++  G  +H  +        V   +
Sbjct: 350 RLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDV--YL 407

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+D Y+KCG + EA   F  +  + V +WS++I G A       A+E F  ++    
Sbjct: 408 GTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGF 467

Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEA 371
             +     +++   +   L+++G+ ++    ++   +   + +   ++D+  + GL+DEA
Sbjct: 468 HANSVTYIAVLTACSHSCLLDEGR-LYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEA 526

Query: 372 TELFNEMPVK-NVVTWTVIITGYGKH 396
            +L   MP++ N V W  I++    H
Sbjct: 527 MDLVQTMPMQPNAVIWASILSACRVH 552



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 29/303 (9%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +ID Y K G ++ A ++FD+M + +V+++ +L+ G++  G  +  L LF +M    + 
Sbjct: 308 NAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLG 367

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
            + FT+   + AS  L ++  G  +H    +   E +  +G +++DMY KCGR+ EA   
Sbjct: 368 ADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVA 427

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F  M  + + TW+AMI G    G     L  F  M+  G   +  T+ + L AC      
Sbjct: 428 FKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACS----- 482

Query: 231 GGGTQIHGFLITSGFPY--------SVKTVIA--GSLVDFYVKCGCLVEARRVFDLIE-- 278
                 H  L+  G  Y        +++  I   G ++D   + G L EA    DL++  
Sbjct: 483 ------HSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEA---MDLVQTM 533

Query: 279 --QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
             Q + + W+S++      +N+  A      L +     D  V   M  ++ D    E  
Sbjct: 534 PMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDA-VYVQMYNIYIDSRQWEDA 592

Query: 337 KQI 339
            +I
Sbjct: 593 SKI 595



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 52/325 (16%)

Query: 228 GSVGGGTQIHGFLITSG---FPYSVKTVIAGSLVDFYVKCGC------LVEARRVFDLIE 278
           GSV   T++H  + TSG    P S     A  L++    C        L  A  +FD + 
Sbjct: 10  GSVRQATELHALVTTSGRLLHPPS-----AAHLLNSLTSCISPSDPLHLRYALSLFDRMP 64

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF-ALVEQGK 337
             + +  ++L   +         + L+R++    +  D F    +    A   A V  G+
Sbjct: 65  CSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGR 124

Query: 338 QIHA--YAAKVPSGLDTSVSNSIVDMYL-------------------------------K 364
            +HA  +   +PS +   +++ I+ MY                                K
Sbjct: 125 MLHAACFRTLLPSAVPL-IASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAK 183

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
            GL+D+A  L    PV+NVVTWT +I+GY + G A EAV  F  ML D + PD V  + +
Sbjct: 184 MGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGM 243

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           LSAC     +         L  DKRM    +    ++D   + G    A+ + +++    
Sbjct: 244 LSACGQLKDLNFGCS-LHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGR 302

Query: 485 SIAIWQTLLSA-CRVHGDLELGREV 508
               W  ++   C+V G +++ R +
Sbjct: 303 GPQPWNAMIDGYCKV-GHVDIARSL 326



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 7/168 (4%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L  G  LH  + +     D+ L   L+DMY KCG +  A   F +M  R+V +W+A++ G
Sbjct: 386 LPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGG 445

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
              NG  KA L  F  M       N  T    + A      ++ G +++   M+      
Sbjct: 446 LAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEG-RLYFDEMRLLHNIR 504

Query: 148 PVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           P + +   +ID+  + G ++EA  +   MP +     NA+I   +L+ 
Sbjct: 505 PQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQP----NAVIWASILSA 548


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/520 (38%), Positives = 310/520 (59%), Gaps = 11/520 (2%)

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQI 236
           ++  WN +I GY   G S   + L+R+M+  G + PD  T+   LKA G +  V  G  I
Sbjct: 84  NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143

Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
           H  +I SGF   +   +  SL+  Y  CG +  A +VFD + +K +++W+S+I G+A+  
Sbjct: 144 HSVVIRSGFGSLI--YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 201

Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
              EA+ L+ ++  + ++ DGF + S++   A    +  GK+ H Y  KV    +   SN
Sbjct: 202 KPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSN 261

Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VE 415
            ++D+Y +CG ++EA  LF+EM  KN V+WT +I G   +GL KEA+ LF+ M   + + 
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLL 321

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P  + ++ +L ACSH G+V+E  EYF R+  + +++PRIEH+ C+VD L RAG++ +A  
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381

Query: 476 LIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGS 535
            I  MP++P++ IW+TLL AC VHGD +L       +L+L+ ++  +YV++SN++A    
Sbjct: 382 YILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQR 441

Query: 536 WNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE 595
           W++ +++RK     G++KV G S VEV   +H F  GD +HP  + I+  L EM  R++ 
Sbjct: 442 WSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRL 501

Query: 596 ELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVC 654
           E G+V  +     D++EE KE +L  HSEK+AI   L+       P +  IRV KNL+VC
Sbjct: 502 E-GYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLI-----STPERWPIRVVKNLKVC 555

Query: 655 GDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            DCH  IK +SK+     VVRD +RFH F+ G CSC DYW
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 217/425 (51%), Gaps = 34/425 (8%)

Query: 25  NLLLDYGV-------QLHGALVKMGFSF-DLMLNNDLIDMYAKCGE---MNGACAVFDKM 73
           NLL  YGV       Q+H   ++ G S  D  L   LI           M+ A  VF K+
Sbjct: 20  NLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI 79

Query: 74  LER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVEN 131
            +  NV  W  L+ G+ + GN+ + +SL+ +M +S  V+P+  T    +KA G ++ V  
Sbjct: 80  EKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRL 139

Query: 132 GMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVL 191
           G  IH + ++SGF     V NS++ +Y+ CG +  A ++FD MP K L+ WN++I G+  
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199

Query: 192 AGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
            G  ++ L L+ +M   G  PD FT  S L AC  +G++  G + H ++I  G   ++ +
Sbjct: 200 NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHS 259

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
             +  L+D Y +CG + EA+ +FD +  K+ +SW+SLI+G A      EA+ELF+ +  +
Sbjct: 260 --SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESK 317

Query: 312 SLQVDGFVLSSMMGVFADFALVEQG--KQIHAYAAKVPS--GLDTSVSN--SIVDMYLKC 365
               +G +   +  V   +A    G  K+   Y  ++     ++  + +   +VD+  + 
Sbjct: 318 ----EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARA 373

Query: 366 GLIDEATELFNEMPVK-NVVTWTVII---TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
           G + +A E   +MP++ NVV W  ++   T +G   LA+ A     +M +  +EP+    
Sbjct: 374 GQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELA-----RMKILQLEPNHSGD 428

Query: 422 LAVLS 426
             +LS
Sbjct: 429 YVLLS 433


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/573 (34%), Positives = 322/573 (56%), Gaps = 3/573 (0%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           L +GVQLH   VK G   ++ + N L+ MYAKC  ++    +F  M   ++V+W  ++ G
Sbjct: 263 LFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 88  FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            +QNG     L LFC M  S ++P+  TL + + A   L+    G ++HG  +++    +
Sbjct: 323 CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD 382

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
             + ++++D+Y KC  +  A  ++D   A  ++  + MI+GYVL G S + + +FR + E
Sbjct: 383 VFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE 442

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
            G  P+     S L AC S+ ++  G ++H + + +   Y  +  +  +L+D Y KCG L
Sbjct: 443 QGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA--YEGRCYVESALMDMYAKCGRL 500

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             +  +F  I  K  ++W+S+I  +AQ     EA+ LFR++    ++     +SS++   
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A    +  GK+IH    K P   D    ++++DMY KCG ++ A  +F  MP KN V+W 
Sbjct: 561 ASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWN 620

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            II  YG +GL KE+V L R M  +  + D V +LA++SAC+H+G V+E    F  +  +
Sbjct: 621 SIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEE 680

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
            ++ PR+EH++C+VD   RAG+LD+A  LI  MP KP   IW  LL ACRVH ++EL   
Sbjct: 681 YQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEI 740

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + L +LD  N   YV+MSNI+A AG W+   ++R+L +   ++K+ G SWV+V+   H
Sbjct: 741 ASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSH 800

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
            F   D +HP +E I+  L  +   ++EE G++
Sbjct: 801 LFVAADKSHPDSEDIYMSLKSILLELREE-GYI 832



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    +  G  +H     +G   D+ + + LI MYA  G +  A  VFD M ER+ 
Sbjct: 153 VKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDC 212

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  +M G+++ G+  + + LF  M +S  +PN  TL+  +  S   S +  G+Q+H +
Sbjct: 213 VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTL 272

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    V N+++ MY+KC  +++  ++F +MP   L+TWN MI+G V  G+ D+ 
Sbjct: 273 AVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQA 332

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF  MQ+ G  PD  T  S L A   L     G ++HG+++ +     V   +  +LV
Sbjct: 333 LLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDV--FLVSALV 390

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A+ V+D  +   V+  S++I GY       EA+++FR L E+ ++ +  
Sbjct: 391 DIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAV 450

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
            ++S++   A  A ++ G+++H+YA K        V ++++DMY KCG +D +  +F+++
Sbjct: 451 AIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKI 510

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ VTW  +I+ + ++G  +EA+ LFR+M ++ V+   V   +VLSAC+    +   +
Sbjct: 511 SAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGK 570

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E    +     ++  +   S ++D  G+ G L+ A  + ESMP K  ++ W +++++   
Sbjct: 571 EIHGVVIKGP-IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGA 628

Query: 499 HG----DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
           +G     + L R + E   + D    V ++ + +  A AG   E  RL
Sbjct: 629 YGLVKESVSLLRHMQEEGFKADH---VTFLALVSACAHAGQVQEGLRL 673



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 242/499 (48%), Gaps = 14/499 (2%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFD 71
           +RL   LR C     L  G+Q+HG  V  G  + D  L   L+ MY        A AVF 
Sbjct: 40  RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFS 99

Query: 72  KMLERNVVS----WTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNIKASGV 125
             L R   +    W  L+ G    G+ ++ L  + +M +  S+  P+  T    +K+   
Sbjct: 100 S-LPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAA 158

Query: 126 LSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAM 185
           L ++  G  +H      G + +  VG+++I MY+  G + +A ++FD M  +  + WN M
Sbjct: 159 LGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218

Query: 186 IAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF 245
           + GYV AG     + LF  M+  G  P+  T    L    +   +  G Q+H   +  G 
Sbjct: 219 MDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGL 278

Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
              V   +A +LV  Y KC CL +  ++F L+ +  +++W+ +I G  Q   + +A+ LF
Sbjct: 279 ESEV--AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
             +++  ++ D   L S++    D     QGK++H Y  +    +D  + +++VD+Y KC
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
             +  A  +++     +VV  + +I+GY  +G+++EAV +FR +L   + P+ VA  +VL
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 426 SACSHSGLVEESQEYFS-RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
            AC+    ++  QE  S  L N    +  +E  S ++D   + GRLD +  +   +  K 
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 485 SIAIWQTLLSACRVHGDLE 503
            +  W +++S+   +G+ E
Sbjct: 515 EVT-WNSMISSFAQNGEPE 532



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 6/297 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           +A  L  C+    +  G +LH   +K  +     + + L+DMYAKCG ++ +  +F K+ 
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            ++ V+W +++  F QNG  +  L+LF +M    VK +  T+S+ + A   L ++  G +
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG+ +K     +    +++IDMY KCG +  A R+F+ MP K+ ++WN++IA Y   G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
             + + L R MQE G   D  TF + + AC   G V  G ++    +T  +  + +    
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFR-CMTEEYQIAPRMEHF 690

Query: 255 GSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEEN--LAE--AMELFR 306
             +VD Y + G L +A   + D+  +     W +L+       N  LAE  + ELF+
Sbjct: 691 ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/727 (30%), Positives = 357/727 (49%), Gaps = 112/727 (15%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN------------------------- 64
           + +QLH  ++K+       + N L+DMY KCG +                          
Sbjct: 160 FALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYS 219

Query: 65  ------GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
                  A  VF +M ER+ VSW  L+  F Q G+   CLS F +M +   KPN  T  +
Sbjct: 220 QLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGS 279

Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
            + A   +S ++ G  +H   ++     +  +G+ +IDMY+KCG +  A R+F+ +  ++
Sbjct: 280 VLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQN 339

Query: 179 LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHG 238
            ++W  +I+G    G  D  L LF +M++   + DEFT  + L  C        G  +HG
Sbjct: 340 QVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHG 399

Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGC-------------------------------L 267
           + I SG    V   +  +++  Y +CG                                +
Sbjct: 400 YAIKSGMDSFVP--VGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDI 457

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
             AR+ FD++ +++VI+W+S++  Y Q     E M+L+  +R ++++ D    ++ +   
Sbjct: 458 DRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRAC 517

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           AD A ++ G Q+ ++  K     D SV+NSIV MY +CG I EA ++F+ + VKN+++W 
Sbjct: 518 ADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWN 577

Query: 388 VIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND 447
            ++  + ++GL  +A+  +  ML  + +PD ++Y+AVLS                     
Sbjct: 578 AMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS--------------------- 616

Query: 448 KRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGRE 507
                         D LGRAG LD+AKNLI+ MP KP+  +W  LL ACR+H D  L   
Sbjct: 617 --------------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAET 662

Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
             + L+ L+ ++   YV+++NI+A++G       +RKL + KG++K  G SW+EVD  +H
Sbjct: 663 AAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVH 722

Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
            F   + +HP   +++  L EM K++++   +V  V  A           S + HSEKLA
Sbjct: 723 VFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCA---------HRSQKYHSEKLA 773

Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
               L    L+  P   I+V KNLRVC DCH  IK LS +     ++RD  RFH F+ G 
Sbjct: 774 FAFGL----LSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGF 829

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 830 CSCRDYW 836



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 165/633 (26%), Positives = 286/633 (45%), Gaps = 112/633 (17%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF-- 70
           Q+  D+ + C    +     +LH  L+  G    L L N+L+ MY+ CG ++ A  VF  
Sbjct: 8   QKFYDAFKLCGSPPI---ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFRE 64

Query: 71  -----------------------------DKM--LERNVVSWTALMCGFLQNGNAKACLS 99
                                        D+M  + R+ VSWT ++ G+ QNG     + 
Sbjct: 65  ANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIK 124

Query: 100 LFCQMGSSSVKP----NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
            F  M   S       + F+ +  +KA G L+S    +Q+H   +K        + NS++
Sbjct: 125 TFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLV 184

Query: 156 DMYSKCGRIN-------------------------------EAARMFDVMPAKSLITWNA 184
           DMY KCG I                                EA  +F  MP +  ++WN 
Sbjct: 185 DMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNT 244

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
           +I+ +   G+  + L  F +M   G  P+  T+ S L AC S+  +  G  +H  ++   
Sbjct: 245 LISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILR-- 302

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
             +S+   +   L+D Y KCGCL  ARRVF+ + +++ +SW+ LI G AQ     +A+ L
Sbjct: 303 MEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALAL 362

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMY 362
           F Q+R+ S+ +D F L++++GV +       G+ +H YA K  SG+D+   V N+I+ MY
Sbjct: 363 FNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIK--SGMDSFVPVGNAIITMY 420

Query: 363 LKC-------------------------------GLIDEATELFNEMPVKNVVTWTVIIT 391
            +C                               G ID A + F+ MP +NV+TW  +++
Sbjct: 421 ARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLS 480

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
            Y +HG ++E + L+  M    V+PD V +   + AC+    ++   +  S +     + 
Sbjct: 481 TYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHV-TKFGLS 539

Query: 452 PRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEI 511
             +   + IV    R G++ EA+ + +S+ VK  I+ W  +++A   +G      E  E 
Sbjct: 540 SDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLIS-WNAMMAAFAQNGLGNKAIETYED 598

Query: 512 LLRLD-GDNPVNYV-MMSNIHADAGSWNECERL 542
           +LR +   + ++YV ++S++   AG  ++ + L
Sbjct: 599 MLRTECKPDHISYVAVLSDLLGRAGLLDQAKNL 631



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 216/454 (47%), Gaps = 77/454 (16%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    L +G  LH  +++M  S D  L + LIDMYAKCG +  A  VF+ + E+N 
Sbjct: 281 LSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQ 340

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSWT L+ G  Q G     L+LF QM  +SV  +EFTL+T +      +    G  +HG 
Sbjct: 341 VSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGY 400

Query: 139 CMKSGFEWNPVVGNSIIDMYSKC-------------------------------GRINEA 167
            +KSG +    VGN+II MY++C                               G I+ A
Sbjct: 401 AIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRA 460

Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
            + FD+MP +++ITWN+M++ Y+  G+S++G+ L+  M+     PD  TF ++++AC  L
Sbjct: 461 RQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADL 520

Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
            ++  GTQ+   +   G    V   +A S+V  Y +CG + EAR+VFD I  K++ISW++
Sbjct: 521 ATIKLGTQVVSHVTKFGLSSDVS--VANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNA 578

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGF----VLSSMMGVFADFALVEQGKQIHAYA 343
           ++  +AQ     +A+E +  +     + D      VLS ++G                  
Sbjct: 579 MMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLLG------------------ 620

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEA 402
                               + GL+D+A  L + MP K N   W  ++     H  +  A
Sbjct: 621 --------------------RAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILA 660

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
               +K++  +VE  G  Y+ + +  + SG +E 
Sbjct: 661 ETAAKKLMELNVEDSG-GYVLLANIYAESGELEN 693



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 35/283 (12%)

Query: 7   SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
           S+V +   LA  L  CS       G  LHG  +K G    + + N +I MYA+CG+   A
Sbjct: 370 SVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKA 429

Query: 67  CAVFDKMLERNVVSWTALMCGFLQNGN---AKAC-------------------------- 97
              F  M  R+ +SWTA++  F QNG+   A+ C                          
Sbjct: 430 SLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSE 489

Query: 98  --LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
             + L+  M S +VKP+  T +T+I+A   L++++ G Q+     K G   +  V NSI+
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIV 549

Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
            MYS+CG+I EA ++FD +  K+LI+WNAM+A +   G  +K +  +  M      PD  
Sbjct: 550 TMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHI 609

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           ++ + L     LG  G   Q    +   G P+     + G+L+
Sbjct: 610 SYVAVLSDL--LGRAGLLDQAKNLI--DGMPFKPNATVWGALL 648



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 7/142 (4%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
            A S+R C+    +  G Q+   + K G S D+ + N ++ MY++CG++  A  VFD + 
Sbjct: 510 FATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIH 569

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFT----LSTNIKASGVLSSVE 130
            +N++SW A+M  F QNG     +  +  M  +  KP+  +    LS  +  +G+L   +
Sbjct: 570 VKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGLLDQAK 629

Query: 131 NGMQIHGMCMKSGFE-WNPVVG 151
           N   I GM  K     W  ++G
Sbjct: 630 N--LIDGMPFKPNATVWGALLG 649


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/584 (35%), Positives = 316/584 (54%), Gaps = 13/584 (2%)

Query: 112 NEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           + FT +  + A   L  +     +  G+  ++   WN ++G  I     K G +  A  +
Sbjct: 76  DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCI-----KNGDLGSAREL 130

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           FD MP +++ TWNAM+AG    G  +  L  F  M+  G  PDEF   S  + C  L  V
Sbjct: 131 FDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDV 190

Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
             G Q+H +++ SG    +   +  SL   Y++CGCL E   V   +   +++S+++ I 
Sbjct: 191 VSGRQVHAYVVRSGMDSDM--CVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIA 248

Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
           G  Q  +   A+E F  +R   +  D     S +   +D A + QG+Q+HA   K     
Sbjct: 249 GRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDK 308

Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
              V  S+V MY +CG + ++  +++     ++   + +I+  G HG   +AV LF++M+
Sbjct: 309 VVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMM 368

Query: 411 LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRL 470
               EP+ V +LA+L ACSHSGL +E  E+F  +      +P ++HY+CIVD LGR+G L
Sbjct: 369 NGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCL 428

Query: 471 DEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIH 530
           DEA+ LI SMPV+    IW+TLLSAC+   + ++   + E ++  D  +   YV++SNI 
Sbjct: 429 DEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIR 488

Query: 531 ADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEME 590
           A +  W +   +RK+ R K ++K  G SWVE   ++H F  GD +HP   +I + L EM 
Sbjct: 489 ATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMM 548

Query: 591 KRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKN 650
            +++ + G+   +    HD+++E KE SL  HSEKLAI  A     LN   G  IRV KN
Sbjct: 549 GKIR-QCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAF----LNLPEGVPIRVMKN 603

Query: 651 LRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           LRVC DCH  IK +S++     VVRD +RFH F  G CSCGDYW
Sbjct: 604 LRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 6/350 (1%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           ++M  N LI    K G++  A  +FDKM  RNV +W A++ G    G  +  L  F  M 
Sbjct: 107 NVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMR 166

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              + P+EF L +  +    L  V +G Q+H   ++SG + +  VGNS+  MY +CG + 
Sbjct: 167 REGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLA 226

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E   +   +P+ +++++N  IAG    G S+  L  F  M+     PD  TF S +  C 
Sbjct: 227 EGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCS 286

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G Q+H  +I +G    V  +   SLV  Y +CGCL ++ RV+D      +   
Sbjct: 287 DLAALAQGQQVHAQVIKAGVDKVVPVIT--SLVHMYSRCGCLGDSERVYDGYCGLDLFLL 344

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           S++I          +A+ELF+Q+     + +     +++   +   L ++G +      K
Sbjct: 345 SAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTK 404

Query: 346 VPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG 392
              G   SV   N IVD+  + G +DEA  L   MPV+ + V W  +++ 
Sbjct: 405 T-YGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 143/304 (47%), Gaps = 8/304 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L    RCC+  L +  G Q+H  +V+ G   D+ + N L  MY +CG +    AV   + 
Sbjct: 177 LGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALP 236

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
              +VS+   + G  QNG+++  L  F  M    V P+  T  + I     L+++  G Q
Sbjct: 237 SLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQ 296

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H   +K+G +    V  S++ MYS+CG + ++ R++D      L   +AMI+     G 
Sbjct: 297 VHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQ 356

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
             K + LF++M   G  P+E TF + L AC   G    G +    +  T GF  SVK   
Sbjct: 357 GHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHY- 415

Query: 254 AGSLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
              +VD   + GCL EA   +  +  +   + W +L+     ++N     ++  ++ ER 
Sbjct: 416 -NCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNF----DMAERIAERV 470

Query: 313 LQVD 316
           ++ D
Sbjct: 471 IESD 474



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 4/105 (3%)

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
           +Q+HA+AA   +  D   +N+++  Y   G +  A  LF  +  +NV++W ++I G  K+
Sbjct: 62  RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKN 121

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYF 441
           G    A  LF KM   +V      + A+++  ++ GL E+S ++F
Sbjct: 122 GDLGSARELFDKMPTRNV----ATWNAMVAGLTNVGLDEDSLQFF 162


>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 615

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/575 (36%), Positives = 324/575 (56%), Gaps = 22/575 (3%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDM-----YSKCGRINEAARMFDVMPAKSLITW-NAMIA 187
           Q+H   +KSG + +P     ++ +      +K  +++ A ++FD +P    + W N ++ 
Sbjct: 49  QLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLR 108

Query: 188 GYV---LAG----YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
           GY     AG     +++   +F +M E G  PD +TF S LKAC +  +   G Q HG  
Sbjct: 109 GYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVA 168

Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
           +  G   +    +  +L++ Y +CG    AR +F  ++ + V+S++++I    +     E
Sbjct: 169 VKVG--AAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGE 226

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVD 360
           A+ LFR+++ + L++    L S++   A    +E G+ IH Y  KV       V+ +++D
Sbjct: 227 ALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALID 286

Query: 361 MYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVA 420
           MY KCG +++A  +F  M  ++   W+V+I  Y  H   +EA+ LF +M    ++PD V 
Sbjct: 287 MYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVT 346

Query: 421 YLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
           +L VL ACSHSGLV E  +YF  +  +  + P I+HY C+ D L R+G+LD A   I+ +
Sbjct: 347 FLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDEL 405

Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECE 540
           P+KP+  +W+TLLSAC   GD +LG++V E +L LD  +  +YV+ SN+ A+ G W E  
Sbjct: 406 PIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMN 465

Query: 541 RLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFV 600
           R+RKL   KG+ KV G S +EVD  +H F+ GD  HP +    +++  + +++K   G+V
Sbjct: 466 RVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLA-GYV 524

Query: 601 YGVKYALH-DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHE 659
               +  H ++ EE K  SLR HSEKLAI   L    LN  PG  +RV KNLRVC DCH 
Sbjct: 525 PNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGL----LNTSPGTTLRVVKNLRVCPDCHS 580

Query: 660 FIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             K +S +     ++RD  RFH FE GVCSCGDYW
Sbjct: 581 MAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 24/433 (5%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDM-----YAKCGEMNGACAVFDKML-ERNVVSWTALMC 86
           QLH A VK G          L+ +      AK  +++ A  VFD++    +VV +  L+ 
Sbjct: 49  QLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLR 108

Query: 87  GFLQ-------NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
           G+ +          A+    +F +M    V P+ +T  + +KA     + E G Q HG+ 
Sbjct: 109 GYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVA 168

Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
           +K G   +  V  ++I+MY++CG    A  MF  +  + ++++NAMI   V +    + L
Sbjct: 169 VKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEAL 228

Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
           +LFR+MQ  G      T  S L AC  LG++  G  IH ++        VK  +  +L+D
Sbjct: 229 VLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVK--VNTALID 286

Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
            Y KCG L +A  VF  +E +   +WS +I+ YA      EA+ LF +++++ ++ D   
Sbjct: 287 MYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVT 346

Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNE 377
              ++   +   LV +G Q   + +    GL   + +   + D+  + G +D A E  +E
Sbjct: 347 FLGVLYACSHSGLVSEGLQY--FDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDE 404

Query: 378 MPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVE 435
           +P+K   + W  +++  G  G A     +F ++L LDD    G  Y+   + C+++G  E
Sbjct: 405 LPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSH--GGDYVIFSNLCANTGRWE 462

Query: 436 ESQEYFSRLCNDK 448
           E      +L N+K
Sbjct: 463 EMNR-VRKLMNEK 474



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 7/299 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ C+     + G Q HG  VK+G +    +   LI+MYA+CG+   A  +F ++    V
Sbjct: 149 LKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECV 208

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VS+ A++   +++      L LF +M +  +K    TL + + A  +L ++E G  IH  
Sbjct: 209 VSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEY 268

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
             K   +    V  ++IDMY KCG + +A  +F  M ++    W+ MI  Y    Y  + 
Sbjct: 269 VRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREA 328

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           + LF +M++ G  PD+ TF   L AC   G V  G Q    +   G    +K    G + 
Sbjct: 329 ISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHY--GCVA 386

Query: 259 DFYVKCGCLVEARRVFDLIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
           D   + G L  A    D +  K + I W +L+       +     +L +Q+ ER L++D
Sbjct: 387 DLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGD----ADLGKQVFERILELD 441



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 1/194 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L   L  C+    L+ G  +H  + K+     + +N  LIDMY KCG +  A +VF  M 
Sbjct: 246 LISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGME 305

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+  +W+ ++  +  +   +  +SLF +M    +KP++ T    + A      V  G+Q
Sbjct: 306 SRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQ 365

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAG 193
                 + G          + D+ ++ G+++ A    D +P K + I W  +++     G
Sbjct: 366 YFDSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRG 425

Query: 194 YSDKGLLLFRKMQE 207
            +D G  +F ++ E
Sbjct: 426 DADLGKQVFERILE 439


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/661 (33%), Positives = 362/661 (54%), Gaps = 32/661 (4%)

Query: 38  LVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKAC 97
           +V  GF  D+ +   LI   A+CG++ GA   FD++  +NVVSW +++    ++G+    
Sbjct: 39  VVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARA 98

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           L ++ +M    VKP++ +    + +   L  +E G  IH      GF+    VGN++++M
Sbjct: 99  LEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNM 158

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEF 215
           YSKC R++ A   F+ + +K +++WN+MIA +   G SD+ L  +R+M  +E  E P + 
Sbjct: 159 YSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLE-PTKI 217

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T    L A  SL S G    +    I  G    +  ++  +LV    KCGCL +AR VFD
Sbjct: 218 TLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDL--LVGSALVSALGKCGCLDQARAVFD 275

Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
            +E+++V+SWS LI   A+     +A+ELF ++    +Q +   L S++   A    + +
Sbjct: 276 RMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAE 335

Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
           G++ HA  +      +T+V+N++V+MY KCG +  A  +F+ M  +NVV+WT ++ GY  
Sbjct: 336 GRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAH 395

Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
           HG  +EA  +F+ M L+ ++P+ + +++VL  CSH+G+V +  E F  +  D  + P  E
Sbjct: 396 HGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTE 455

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
           HY C++D LGRAG L+EA+ L+ +MPV+P  A W +LL AC+VH   +  + + ++   L
Sbjct: 456 HYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDL 515

Query: 516 D---GDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
                  P  YV++SN++ D    ++ E  +              S +EV   +H F  G
Sbjct: 516 ALPFASAP--YVLLSNMYTDEEQQSDPEEDQ------------CSSLIEVKGRVHEFVAG 561

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP   +I +++ E++ R++EE+  + G        QE S +E+   HS KLAI    
Sbjct: 562 DWSHP---RIEEIVAELQ-RLQEEMMILRGSSLCEEGGQEGSVQEN--EHSLKLAIAF-- 613

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
             G L    G  I V    R+C +CH+  K +SKI     VVRD+ RFH  E GVCSCGD
Sbjct: 614 --GVLASLQGSSINVVNTRRICVECHDAAKVISKIAGRKIVVRDSYRFHHIEQGVCSCGD 671

Query: 693 Y 693
           Y
Sbjct: 672 Y 672



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 201/390 (51%), Gaps = 10/390 (2%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           +I    + +GF+ +  V  ++I   ++CG +  A   FD +PAK++++WN+MIA     G
Sbjct: 34  EIQFRVVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHG 93

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
           +  + L ++R+M+  G  P + ++   L +C  L  +  G  IH  + T GF   V   +
Sbjct: 94  HFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQV--FV 151

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERS 312
             +LV+ Y KC  L  AR  F+ I+ K V+SW+S+I  ++Q     EA+E +R++  E  
Sbjct: 152 GNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEER 211

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
           L+     L   +G           K +   A ++    D  V +++V    KCG +D+A 
Sbjct: 212 LEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQAR 271

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F+ M  +NVV+W+ +I    +HG  ++A+ LF +M LD ++P+ V  L+VL AC+ +G
Sbjct: 272 AVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTG 331

Query: 433 LVEESQEYFSRL--CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
            + E +   +R+  C     +      + +V+  G+ G L  A+ + ++M  + ++  W 
Sbjct: 332 AIAEGRRTHARVSGCG---FEAETNVANALVNMYGKCGHLGSARTVFDAMTWR-NVVSWT 387

Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNP 520
            +L+    HG  E  R V + +  L+G  P
Sbjct: 388 AMLAGYAHHGHTEEARRVFKAMA-LEGIQP 416



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 193/384 (50%), Gaps = 5/384 (1%)

Query: 22  CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
           CS    L+ G  +H  +   GF   + + N L++MY+KC  ++ A   F+++  ++VVSW
Sbjct: 124 CSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSW 183

Query: 82  TALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
            +++    Q G +   L  + +M G   ++P + TL   + A+  L S  +   +    +
Sbjct: 184 NSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAI 243

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
           + G E + +VG++++    KCG +++A  +FD M  +++++W+ +IA     G     + 
Sbjct: 244 RLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIE 303

Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
           LF +M   G  P+E T  S L+AC S G++  G + H  +  SG  +  +T +A +LV+ 
Sbjct: 304 LFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARV--SGCGFEAETNVANALVNM 361

Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
           Y KCG L  AR VFD +  ++V+SW++++ GYA   +  EA  +F+ +    +Q +    
Sbjct: 362 YGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITF 421

Query: 321 SSMMGVFADFALVEQG-KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
            S++   +   +V  G +Q H           T     ++D+  + G ++EA EL   MP
Sbjct: 422 VSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMP 481

Query: 380 VK-NVVTWTVIITGYGKHGLAKEA 402
           V+ +   W  ++     H     A
Sbjct: 482 VEPDKAAWNSLLGACKVHSHTDRA 505



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L  C+    +  G + H  +   GF  +  + N L++MY KCG +  A  VFD M  RNV
Sbjct: 324 LEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNV 383

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST---NIKASGVLSSVENGM-Q 134
           VSWTA++ G+  +G+ +    +F  M    ++PN  T  +   N   +GV+S   +G+ Q
Sbjct: 384 VSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVS---DGLEQ 440

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
            H   M   F   PV  +   +ID+  + G + EA  +   MP +     WN+++    +
Sbjct: 441 FH--IMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKV 498

Query: 192 AGYSDKG 198
             ++D+ 
Sbjct: 499 HSHTDRA 505


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/617 (35%), Positives = 338/617 (54%), Gaps = 26/617 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C+    L  G QLH   +K  F+ D ++    +DMYAKC  M  A  +FDK   
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSEN 302

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N  S+ A++ G+ Q  +    L LF ++ SS +  +E +LS   +A  ++  +  G+QI
Sbjct: 303 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 362

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           + + +KS    +  V N+ IDMY KC  + EA R+FD M  +  ++WNA+IA +   G  
Sbjct: 363 YDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 422

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + L LF  M      PDEFTF S LKAC   GS+G G +IH  ++ SG   +  + +  
Sbjct: 423 YETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGM--ASNSSVGC 479

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKS--------------------VISWSSLILGYAQE 295
           SL+D Y KCG + EA ++     Q++                     +SW+S+I GY  +
Sbjct: 480 SLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           E   +A  LF ++ E  +  D F  ++++   A+ A    GKQIHA   K     D  +S
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIS 599

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           +++VDMY KCG + ++  +F +   ++ VTW  +I GY  HG  +EA+ LF +M+L++++
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 659

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P+ V ++++L AC+H GL+++  EYF  +  D  + P++ HYS +VD LG++G++  A  
Sbjct: 660 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 719

Query: 476 LIESMPVKPSIAIWQTLLSACRVH-GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           LI  MP +    IW+TLL  C +H  ++E+  E    LLRLD  +   Y ++SN++ADAG
Sbjct: 720 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 779

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W +   LR+  R   LKK  G SWVE+  E+H F  GD  HP  E+I++ L  +   MK
Sbjct: 780 MWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839

Query: 595 --EELGFVYGVKYALHD 609
             ++  FV GV+    D
Sbjct: 840 PFDDSSFVPGVEVEEED 856



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 214/391 (54%), Gaps = 8/391 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I+ YAK   M  A   F+ M  R+VVSW +++ G+LQNG     + +F  MG
Sbjct: 71  DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
            +  + +  T +  +K    L     GMQIHG+ ++ G + + V  ++++DMY+K  R  
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E+ R+F  +P K+ ++W+A+IAG V        L  F++MQ+      +  + S L++C 
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L  +  G Q+H   + S F  +   ++  + +D Y KC  + +A+ +FD  E  +  S+
Sbjct: 251 ALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSY 308

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE---QGKQIHAY 342
           +++I GY+QEE+  +A+ LF +L    L  D   LS   GVF   ALV+   +G QI+  
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS---GVFRACALVKGLSEGLQIYDL 365

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A K    LD  V+N+ +DMY KC  + EA  +F+EM  ++ V+W  II  + ++G   E 
Sbjct: 366 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 425

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           + LF  ML   +EPD   + +VL AC+   L
Sbjct: 426 LFLFVSMLRSRIEPDEFTFGSVLKACTGGSL 456



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 211/399 (52%), Gaps = 27/399 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+   R C+    L  G+Q++   +K   S D+ + N  IDMY KC  +  A  VFD+M 
Sbjct: 343 LSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 402

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ VSW A++    QNG     L LF  M  S ++P+EFT  + +KA     S+  GM+
Sbjct: 403 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKAC-TGGSLGYGME 461

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM----------------FDVMPAKS 178
           IH   +KSG   N  VG S+IDMYSKCG I EA ++                 + M  K 
Sbjct: 462 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKR 521

Query: 179 L----ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           L    ++WN++I+GYV+   S+   +LF +M E G  PD+FT+ + L  C +L S G G 
Sbjct: 522 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 581

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  +I       V   I+ +LVD Y KCG L ++R +F+   ++  ++W+++I GYA 
Sbjct: 582 QIHAQVIKKELQSDV--YISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA++LF ++   +++ +     S++   A   L+++G + + Y  K   GLD  +
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 698

Query: 355 SN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
            +  ++VD+  K G +  A EL  EMP + + V W  ++
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 267/571 (46%), Gaps = 58/571 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS       G+Q+HG +V++G   D++  + L+DMYAK      +  VF  + E+N 
Sbjct: 145 LKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+A++ G +QN      L  F +M   +   ++   ++ +++   LS +  G Q+H  
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 264

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  + +V  + +DMY+KC  + +A  +FD     +  ++NAMI GY    +  K 
Sbjct: 265 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKA 324

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF ++   G   DE + +   +AC  +  +  G QI+   I S    S+   +A + +
Sbjct: 325 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSL--SLDVCVANAAI 382

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  L EA RVFD + ++  +SW+++I  + Q     E + LF  +    ++ D F
Sbjct: 383 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 442

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA----TEL 374
              S++      +L   G +IH+   K     ++SV  S++DMY KCG+I+EA    +  
Sbjct: 443 TFGSVLKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 501

Query: 375 FNEMPVKNV----------------VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
           F    V                   V+W  II+GY     +++A  LF +M+   + PD 
Sbjct: 502 FQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 561

Query: 419 VAYLAVLSACS-----------HSGLVE---ESQEYF----------------SRLCNDK 448
             Y  VL  C+           H+ +++   +S  Y                 SRL  +K
Sbjct: 562 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEK 621

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELG 505
            ++     ++ ++      G+ +EA  L E M    +KP+   + ++L AC   G ++ G
Sbjct: 622 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681

Query: 506 REVGEILLRLDGDNP--VNYVMMSNIHADAG 534
            E   ++ R  G +P   +Y  M +I   +G
Sbjct: 682 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 712



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 189/409 (46%), Gaps = 45/409 (11%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++E G Q H   + SGF     V N ++ +Y+       A+ +FD MP + +++WN MI 
Sbjct: 21  ALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMIN 80

Query: 188 GY--------------------------VLAGYSDKGLLL-----FRKMQEHGEIPDEFT 216
           GY                          +L+GY   G  L     F  M   G   D  T
Sbjct: 81  GYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRT 140

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F   LK C  L     G QIHG ++  G    V  V A +L+D Y K    VE+ RVF  
Sbjct: 141 FAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDV--VAASALLDMYAKGKRFVESLRVFQG 198

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           I +K+ +SWS++I G  Q   L+ A++ F+++++ +  V   + +S++   A  + +  G
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
            Q+HA+A K     D  V  + +DMY KC  + +A  LF++    N  ++  +ITGY + 
Sbjct: 259 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQE 318

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPRIE 455
               +A+ LF +++   +  D ++   V  AC+   GL E  Q Y      D  +K  + 
Sbjct: 319 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY------DLAIKSSLS 372

Query: 456 HYSCI----VDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
              C+    +D  G+   L EA  + + M  + +++ W  +++A   +G
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 420



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 99/182 (54%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +  ++   A  L  C+       G Q+H  ++K     D+ +++ L+DMY+KCG+++ + 
Sbjct: 557 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSR 616

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+K L R+ V+W A++CG+  +G  +  + LF +M   ++KPN  T  + ++A   + 
Sbjct: 617 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 676

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
            ++ G++   M MK  +  +P + +  +++D+  K G++  A  +   MP ++  + W  
Sbjct: 677 LIDKGLEYFYM-MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 735

Query: 185 MI 186
           ++
Sbjct: 736 LL 737



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 33/237 (13%)

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C   G++  G Q H  +I SGF  +  T +   L+  Y      V A  VFD +  + V+
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPT--TFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVV 73

Query: 284 SWSSLILGYAQEENLAEA-------------------------------MELFRQLRERS 312
           SW+ +I GYA+  N+ +A                               +E+F  +    
Sbjct: 74  SWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAG 133

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            + DG   + ++ V +       G QIH    +V    D   +++++DMY K     E+ 
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
            +F  +P KN V+W+ II G  ++ L   A+  F++M   +       Y +VL +C+
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250


>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/622 (34%), Positives = 346/622 (55%), Gaps = 24/622 (3%)

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS---SVENGMQI 135
           +SWT+++C            S F  + ++  + +E     N++   +L    S+E   Q+
Sbjct: 1   MSWTSVLCQ-----------SHFLSLPNNPPQSSELNAKFNVQGLSLLKRCKSMEEFKQV 49

Query: 136 HGMCMKSGFEWNPVVGNSIIDM--YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
           H   +K G  ++   G++++     S+ G +  A  +F  +       +N MI G V + 
Sbjct: 50  HAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSM 109

Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
             ++ LLL+ +M E G  PD FT+   LKAC  LG++  G QIH  +  +G    V   +
Sbjct: 110 NLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDV--FV 167

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERS 312
              L++ Y KCG +  A  VF+ +++KSV SWSS+I  +A  E   E + L   +  E  
Sbjct: 168 QNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGR 227

Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
            + +  +L S +           G+ IH    +  S L+ +V  S++DMY+K G +++  
Sbjct: 228 HRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGL 287

Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
            +F  M  KN  ++TVIITG   HG  +EA+ +F  ML + + PD V Y+ VLSACSH+G
Sbjct: 288 CVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAG 347

Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
           LV E  + F+RL  + ++KP I+HY C+VD +GRAG L  A +LI+SMP+KP+  +W++L
Sbjct: 348 LVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSL 407

Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
           LSAC+VH +LE+G    E + +L+  NP +Y++++N++A A  W +  R+R     K L 
Sbjct: 408 LSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLV 467

Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
           +  G S VE ++ ++ F   D + P  E I+ ++ +ME ++K E G+   +   L D+ E
Sbjct: 468 QTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFE-GYTPDMSQVLLDVDE 526

Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
           + K + L+ HS+KLAI  AL++       G  IR+ +N+R+C DCH + K +S I +   
Sbjct: 527 DEKRQRLKHHSQKLAIAFALIQTS----EGSRIRISRNIRMCNDCHTYTKFISVIYEREI 582

Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
            VRD  RFH F+ G CSC DYW
Sbjct: 583 TVRDRNRFHHFKDGTCSCKDYW 604



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 15/373 (4%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  ++K+G  +D    ++L+   A  + G M  AC++F ++ E     +  ++ G + 
Sbjct: 48  QVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVN 107

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
           + N +  L L+ +M    ++P+ FT    +KA  +L +++ G+QIH    K+G E +  V
Sbjct: 108 SMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFV 167

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG- 209
            N +I+MY KCG I  A+ +F+ M  KS+ +W+++I  +       + L+L   M   G 
Sbjct: 168 QNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGR 227

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI--TSGFPYSVKTVIAGSLVDFYVKCGCL 267
              +E    S L AC  LGS   G  IHG L+   S    +VKT    SL+D YVK G L
Sbjct: 228 HRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKT----SLIDMYVKSGSL 283

Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
            +   VF  + QK+  S++ +I G A      EA+ +F  + E  L  D  V   ++   
Sbjct: 284 EKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSAC 343

Query: 328 ADFALVEQGKQIH---AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NV 383
           +   LV +G Q      +  K+   +       +VD+  + G++  A +L   MP+K N 
Sbjct: 344 SHAGLVNEGLQCFNRLQFEHKIKPTIQH--YGCMVDLMGRAGMLKGAYDLIKSMPIKPND 401

Query: 384 VTWTVIITGYGKH 396
           V W  +++    H
Sbjct: 402 VVWRSLLSACKVH 414



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 133/287 (46%), Gaps = 13/287 (4%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS    L  GVQ+H  + K G   D+ + N LI+MY KCG +  A  VF++M E++V
Sbjct: 137 LKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSV 196

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            SW++++           CL L   M G    +  E  L + + A   L S   G  IHG
Sbjct: 197 ASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHG 256

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
           + +++  E N  V  S+IDMY K G + +   +F  M  K+  ++  +I G  + G   +
Sbjct: 257 ILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGRE 316

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--G 255
            L +F  M E G  PD+  +   L AC   G V  G Q    L    F + +K  I   G
Sbjct: 317 ALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRL---QFEHKIKPTIQHYG 373

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSV----ISWSSLILGYAQEENL 298
            +VD   + G L   +  +DLI+   +    + W SL+       NL
Sbjct: 374 CMVDLMGRAGML---KGAYDLIKSMPIKPNDVVWRSLLSACKVHHNL 417



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 4/182 (2%)

Query: 10  SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
           +E   L  +L  C+     ++G  +HG L++     ++ +   LIDMY K G +     V
Sbjct: 230 AEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCV 289

Query: 70  FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
           F  M ++N  S+T ++ G   +G  +  LS+F  M    + P++      + A      V
Sbjct: 290 FQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLV 349

Query: 130 ENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMI 186
             G+Q     ++   +  P + +   ++D+  + G +  A  +   MP K + + W +++
Sbjct: 350 NEGLQCFNR-LQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLL 408

Query: 187 AG 188
           + 
Sbjct: 409 SA 410


>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
 gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
          Length = 673

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/682 (30%), Positives = 361/682 (52%), Gaps = 35/682 (5%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML-ERN 77
           +R C+    L+ G  +H  +++ G+  +  L N L++MY KC  +  A AVF+ +  ER 
Sbjct: 17  IRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARERI 76

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
              W  L+    Q G ++  ++L+ +M    VKPN  TL + + A   L  ++ G +IH 
Sbjct: 77  AFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIHR 136

Query: 138 MCMKSG--------FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
             +  G           + V+  +++ MY +CG + +A  +F+ +  + L  WNAM+A Y
Sbjct: 137 SHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAAY 196

Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
              G   + +L+ R+M   G  P E TF   L  C ++G++     IH  ++ +G     
Sbjct: 197 SRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGL--ES 254

Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +  +  +LV  Y +CG L  A   F  I  K +++W+++I  YAQ  +  +++ ++  + 
Sbjct: 255 RPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMD 314

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              ++VD   L  ++   +  AL  + + +HA        LD  +  ++V+ Y + G + 
Sbjct: 315 LEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLV 374

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +A  +F EM  +NV TW+ ++  Y + G    ++ ++R+M L  + P+ + Y+++L AC+
Sbjct: 375 DADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACN 434

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+GL++   +YF+ +  D  ++   EH SCIVD LGR+GRLDEA+ L+ S+P +  I+ W
Sbjct: 435 HAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAW 494

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
             LL ACR HGD+E G  V     +++      YV +SN++A  G W+E  R+R+L  + 
Sbjct: 495 MCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVSRVRQLM-AN 553

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            L K  G+S+VE+D  +H F  GD+THP  + I   ++E+E                   
Sbjct: 554 TLDKSTGKSFVEIDGRLHEFIQGDETHPEKDSIQAKILELE------------------- 594

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           +   +      +HSEK+A+  A+++    E P   +RV  +L +C +CH F+KG+SK  +
Sbjct: 595 LDSPTVPLFHCLHSEKVAVAFAMLKTS-GEIP---LRVVSSLGICHECHAFMKGISKRCR 650

Query: 670 LVFVVRDATRFHRFEGGVCSCG 691
              VVRDA   HRF+GG CSCG
Sbjct: 651 REIVVRDAEMLHRFDGGSCSCG 672


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/662 (32%), Positives = 347/662 (52%), Gaps = 80/662 (12%)

Query: 107 SSVKPNEFTLSTNIKASGV-------------LSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           S  KP +F+   NI  S +             ++S++   Q+HG+ ++SG   +  V  +
Sbjct: 11  SPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGA 70

Query: 154 IIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++  Y+       + A ++F  +P  ++  WN +I G +      K +  + +M      
Sbjct: 71  LLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR- 129

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG---------------- 255
           P++FT+ +  KAC    +V  G QIHG ++  G    V    AG                
Sbjct: 130 PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKM 189

Query: 256 ------------SLVDFYVKCGCLV-------------------------------EARR 272
                       +++D Y+KCG L                                +AR+
Sbjct: 190 FYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARK 249

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + ++  ISWSS++ GY       EA+E+F+Q++    +   F+LSS++   ++   
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++QG+ +HAY  +    LD  +  +++DMY KCG +D   E+F EM  + + TW  +I G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
              HG A++A+ LF K+    ++P+G+  + VL+AC+H+G V++    F  +     + P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +EHY C+VD LGR+G   EA++LI SMP+KP+ A+W  LL ACR+HG+ +L   VG+IL
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L L+  N   YV++SNI+A  G +++  ++RKL + +G+K V G S V+++  +H F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP  ++I++ L  +++R+ +  G        L DI EE KE ++  HSEKLAI   L
Sbjct: 550 DGSHPQMKEIYRKLKIIKERL-QMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGL 608

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    N  PGK I + KNLRVC DCH   K +S+I     +VRD  R+H F+ G CSC D
Sbjct: 609 I----NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKD 664

Query: 693 YW 694
           +W
Sbjct: 665 FW 666



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 211/468 (45%), Gaps = 78/468 (16%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALM 85
           L Y  QLHG +++ G   D  ++  L+  YA       + A  VF  +   NV  W  ++
Sbjct: 46  LQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF- 144
            G L+N      +  + +M     +PN+FT  T  KA  V  +V+ G QIHG  +K G  
Sbjct: 106 KGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIG 164

Query: 145 -----------------------------EWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                                        E + V  N++ID Y KCG +  A  +F  MP
Sbjct: 165 SDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224

Query: 176 AKSL-------------------------------ITWNAMIAGYVLAGYSDKGLLLFRK 204
            K++                               I+W++M+ GY+ AG   + L +F++
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           MQ     P  F  +S L AC ++G++  G  +H +L  +     +  V+  +L+D Y KC
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI--KLDAVLGTALLDMYAKC 342

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L     VF+ ++++ + +W+++I G A      +A+ELF +L+E  ++ +G  L  ++
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK- 381
              A    V++G +I     +   G+D  + +   +VD+  + GL  EA +L N MP+K 
Sbjct: 403 TACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461

Query: 382 NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           N   W  ++     HG   LA E VG   K+LL ++EP       +LS
Sbjct: 462 NAAVWGALLGACRIHGNFDLA-ERVG---KILL-ELEPQNSGRYVLLS 504



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 153/316 (48%), Gaps = 13/316 (4%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +I+  AK G +  A  +FD+M ER+ +SW++++ G++  G  K  L +F QM     +
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P  F LS+ + A   + +++ G  +H    ++  + + V+G +++DMY+KCGR++    +
Sbjct: 292 PGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEV 351

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ M  + + TWNAMI G  + G ++  L LF K+QE    P+  T    L AC   G V
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411

Query: 231 GGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSS 287
             G +I  F     F Y V   +   G +VD   + G   EA  + + +  K +   W +
Sbjct: 412 DKGLRI--FQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGA 468

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDG--FVLSSMMGVFADFALVEQGKQIHAYAAK 345
           L+       N   A  + + L E   Q  G   +LS++      F  V + +++      
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK---- 524

Query: 346 VPSGLDTSVSNSIVDM 361
              G+ T    SIVD+
Sbjct: 525 -DRGIKTVPGVSIVDL 539



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    +D G  +H  L +     D +L   L+DMYAKCG ++    VF++M 
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER + +W A++ G   +G A+  L LF ++    +KPN  TL   + A      V+ G++
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
           I    M+  +  +P + +   ++D+  + G  +EA  + + MP K +   W A++    +
Sbjct: 417 IF-QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRI 475

Query: 192 AGYSD 196
            G  D
Sbjct: 476 HGNFD 480


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/667 (33%), Positives = 347/667 (52%), Gaps = 51/667 (7%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
           Q+H  + K G   D ++   L+   A      ++ A  +F      +      L+     
Sbjct: 20  QIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMHNTLIRSLSL 79

Query: 91  NGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           +    + L  F Q+    ++ P+ FT +  +KA      +  G+Q+H    + GF+ +  
Sbjct: 80  SQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIF 139

Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
           VG ++I MY++CG    A R+FD M                                   
Sbjct: 140 VGTTLISMYAECGDSGSARRVFDEMSE--------------------------------- 166

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+  T+ + L A    G V G   + G +       S   ++AG     Y K G L  
Sbjct: 167 --PNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLT-SWNGMLAG-----YAKAGELGL 218

Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
           ARRVF  +  +  +SWS++I+G+A      EA   FR+L    ++ +   L+ ++   A 
Sbjct: 219 ARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQ 278

Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTV 388
               E GK +H +  K       SV+N+++D Y KCG +  A  +F  MPV +++V+WT 
Sbjct: 279 AGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTS 338

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           II G   HG  +EA+ LF +M    V PDG+ ++++L ACSHSGLVEE    FS++ N  
Sbjct: 339 IIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLY 398

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
            ++P IEHY C+VD  GRA RL +A   I  MPV P+  IW+TLL AC +HG++E+   V
Sbjct: 399 GIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELV 458

Query: 509 GEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHF 568
              L  +D DN  ++V++SN++A AG W +   +R+      +KK  G S +E+DK I+ 
Sbjct: 459 KARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYG 518

Query: 569 FYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAI 628
           F  G+  + +TE+ H+ L E+  R++ E G+   ++  LHDI+EE KE+S+  HSEKLA 
Sbjct: 519 FVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAA 578

Query: 629 GLALVRGGLNEQP-GKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
                  G+ + P G+++R+ KNLRVCGDCH  +K +SK+ ++  +VRD +RFH F+ G 
Sbjct: 579 AF-----GIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGF 633

Query: 688 CSCGDYW 694
           CSC DYW
Sbjct: 634 CSCRDYW 640



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 198/429 (46%), Gaps = 50/429 (11%)

Query: 3   RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
           R   +L  +    A +L+  + +  L  G+QLH    + GF   + +   LI MYA+CG+
Sbjct: 94  RRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGD 153

Query: 63  MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
              A  VFD+M E NVV+W A++    + G+                             
Sbjct: 154 SGSARRVFDEMSEPNVVTWNAVLTAAFRCGD----------------------------- 184

Query: 123 SGVLSSVENGMQIHG-MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
                 VE    + G M +++   WN ++       Y+K G +  A R+F  MP +  ++
Sbjct: 185 ------VEGAQDVFGCMPVRNLTSWNGMLAG-----YAKAGELGLARRVFYEMPLRDEVS 233

Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
           W+ MI G+   G  D+    FR++       +E + T  L AC   G+   G  +HGF+ 
Sbjct: 234 WSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVE 293

Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAE 300
            +GF Y     +  +L+D Y KCG +  AR VF ++   +S++SW+S+I G A      E
Sbjct: 294 KAGFLYV--GSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEE 351

Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
           A++LF ++ E  ++ DG    S++   +   LVE+G  + +    +  G++ ++ +   +
Sbjct: 352 AIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNL-YGIEPAIEHYGCM 410

Query: 359 VDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           VD+Y +   + +A E   EMPV  N + W  ++     HG  + A     K  L +++PD
Sbjct: 411 VDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAE--LVKARLAEMDPD 468

Query: 418 GVAYLAVLS 426
                 +LS
Sbjct: 469 NSGDHVLLS 477



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 149/380 (39%), Gaps = 89/380 (23%)

Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE---- 269
           E  + S L  C SL       QIH  +  +G       ++ G L+   + C   +     
Sbjct: 2   EEAWVSLLSKCSSLKPT---KQIHAQICKTGL--HTDPLVFGKLL---LHCAITISDALH 53

Query: 270 -ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMMGVF 327
            A R+F           ++LI   +  +    ++  F QLR + +L  D F  +  +   
Sbjct: 54  YALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAV 113

Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWT 387
           A+   +  G Q+H+ A +        V  +++ MY +CG    A  +F+EM   NVVTW 
Sbjct: 114 ANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWN 173

Query: 388 VIIT-------------------------------GYGKH---GLAK------------- 400
            ++T                               GY K    GLA+             
Sbjct: 174 AVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVS 233

Query: 401 ---------------EAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
                          EA G FR++L +++  + V+   VLSAC+ +G  E     F ++ 
Sbjct: 234 WSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFE-----FGKIL 288

Query: 446 NDKRMKPRIEHY----SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG- 500
           +    K    +     + ++D+  + G +  A+ + ++MPV  SI  W ++++   +HG 
Sbjct: 289 HGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGC 348

Query: 501 ---DLELGREVGEILLRLDG 517
               ++L  E+ E  +R DG
Sbjct: 349 GEEAIQLFHEMEESGVRPDG 368


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/668 (32%), Positives = 367/668 (54%), Gaps = 34/668 (5%)

Query: 30  YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
           YG  LH  L+  G   +LML   +I MYAKC  M  A  V  +  + +V  WT+++ GF+
Sbjct: 237 YGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFV 296

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
           QN   +  ++    M  S + PN FT ++ + AS  + S+E G Q H   +  G E +  
Sbjct: 297 QNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIY 356

Query: 150 VGNSIIDMYSKCGRIN-EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
           VGN+++DMY KC        + F  +   ++I+W ++IAG+   G+ ++ + LF +MQ  
Sbjct: 357 VGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAA 416

Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
           G  P+ FT ++ L AC  + S+    ++HG++I +     +   +  +LVD Y   G   
Sbjct: 417 GVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQV--DIDMAVGNALVDAYAGGGMAD 474

Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
           EA  V  ++  + +I++++L     Q+ +   A+ +   +    +++D F L+S +   A
Sbjct: 475 EAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAA 534

Query: 329 DFALVEQGKQIHAYAAKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
              ++E GKQ+H Y+ K  SG +   SVSNS+V  Y KCG + +A  +F ++   + V+W
Sbjct: 535 GLGIMETGKQLHCYSFK--SGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSW 592

Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
             +I+G   +GL  +A+  F  M L  V+PD V +L+++ ACS   L+ +  +YF  +  
Sbjct: 593 NGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEK 652

Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
              + P+++HY C+VD LGR GRL+EA  +IE+MP KP   I++TLL+AC +HG++ LG 
Sbjct: 653 TYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGE 712

Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
           ++    L LD  +P  Y+++++++ +AG  +  ++ RKL R +GL++   + W+EV  +I
Sbjct: 713 DMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKI 772

Query: 567 HFFYG----GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
           + F      G+D   + EK+  ++ E++ R     G+ Y          +ES+++    H
Sbjct: 773 YLFSAREKIGNDE--INEKLESLITEIKNR-----GYPY----------QESEDK--LYH 813

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SE+LA+      G L+      IR+ KN  +C  CH FI  L++ +    +VRD  RFH 
Sbjct: 814 SEQLALAF----GVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREIIVRDRKRFHV 869

Query: 683 FEGGVCSC 690
           F+ G CSC
Sbjct: 870 FKDGQCSC 877



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 250/506 (49%), Gaps = 7/506 (1%)

Query: 5   SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
           SFS    R+     L  C+   L + G  +H  ++K+G   DL L+N+L+ +YAKC  + 
Sbjct: 10  SFSPCRFRETCLQVLSLCNSQTLKE-GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVG 68

Query: 65  GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
            A  +FD+M  R+VVSWT L+    +N +    L LF  M  S   PNEFTLS+ +++  
Sbjct: 69  QARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCS 128

Query: 125 VLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNA 184
            L   E G +IH   +K G E N V+G +++D+Y+KC    E  ++   +    +++W  
Sbjct: 129 ALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTT 188

Query: 185 MIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG-SVGGGTQIHGFLITS 243
           MI+  V      + L L+ KM E G  P+EFTF   L     LG   G G  +H  LIT 
Sbjct: 189 MISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLIT- 247

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
            F   +  ++  +++  Y KC  + +A +V     +  V  W+S+I G+ Q   + EA+ 
Sbjct: 248 -FGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVN 306

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
               +    +  + F  +S++   +    +E G+Q H+    V    D  V N++VDMY+
Sbjct: 307 ALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYM 366

Query: 364 KCG-LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
           KC        + F  + + NV++WT +I G+ +HG  +E+V LF +M    V+P+     
Sbjct: 367 KCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLS 426

Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
            +L ACS    + ++++    +    ++   +   + +VD+    G  DEA ++I  M  
Sbjct: 427 TILGACSKMKSIIQTKKLHGYIIK-TQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNH 485

Query: 483 KPSIAIWQTLLSACRVHGDLELGREV 508
           +  I  + TL +     GD E+   V
Sbjct: 486 R-DIITYTTLAARLNQQGDHEMALRV 510



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 123/258 (47%), Gaps = 17/258 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CSK   +    +LHG ++K     D+ + N L+D YA  G  + A +V   M 
Sbjct: 425 LSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMN 484

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+++++T L     Q G+ +  L +   M +  VK +EF+L++ I A+  L  +E G Q
Sbjct: 485 HRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQ 544

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           +H    KSGFE    V NS++  YSKCG + +A R+F  +     ++WN +I+G    G 
Sbjct: 545 LHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGL 604

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV---KT 251
               L  F  M+  G  PD  TF S + AC             G L+  G  Y     KT
Sbjct: 605 ISDALSAFDDMRLAGVKPDSVTFLSLIFACS-----------QGSLLNQGLDYFYSMEKT 653

Query: 252 VIAGSLVDFYVKCGCLVE 269
                 +D YV   CLV+
Sbjct: 654 YHITPKLDHYV---CLVD 668


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/675 (32%), Positives = 361/675 (53%), Gaps = 23/675 (3%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF----DKMLERNVVSWTALMCGFL 89
           +HG +V  G   +  +   L+D Y K G ++ A  VF    D+    ++V+ +A++    
Sbjct: 136 IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACW 195

Query: 90  QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS--SVENGMQIHGMCMKSGFEWN 147
           QNG  +  L LF  M     KP+  TL + + A  +L   S    +    M + S    N
Sbjct: 196 QNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDN 255

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
            V+G +++  Y++   ++ A   FD + +  +++WNAM A Y+      + L+LF +M  
Sbjct: 256 -VLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLL 314

Query: 208 HGEIPDEFTFTSTLKACGSLGSVGG---GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
            G  P   TF + L AC +         G +I   L  +G      T +A + ++ Y KC
Sbjct: 315 EGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL--EGDTAVANATLNMYAKC 372

Query: 265 GCLVEARRVFDLIE--QKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLS 321
           G L +AR VF+ I   ++  I+W+S++  Y       EA ELF+ +  E+ ++ +     
Sbjct: 373 GSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFV 432

Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV- 380
           +++        + QG++IHA         DT + N++++MY KCG +D+A  +F++    
Sbjct: 433 AVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSN 492

Query: 381 -KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
            ++V+ WT ++ GY ++G A+ A+ LF  M    V P+ + +++ L+AC+H G +E+  E
Sbjct: 493 QEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCE 552

Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
             S +  D  + P  +H+SCIVD LGR GRLDEA+ L+E    +  +  W  LL AC+  
Sbjct: 553 LLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNS 611

Query: 500 GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSW 559
            +LE G    E +++LD +   +Y+++++++A AG WNE   +RK    KG++   G S 
Sbjct: 612 KELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSA 671

Query: 560 VEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL 619
           VEV++E+H F  GD +HP +E+I+  L  +   +K   G+V      LHD+ +E KE  L
Sbjct: 672 VEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAA-GYVADTGLVLHDVSQEHKERLL 730

Query: 620 RVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
             HSEKLAI   L    ++   G  +RV KNLRVC DCH   K +SK+     ++RD++R
Sbjct: 731 MRHSEKLAIAFGL----MSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSR 786

Query: 680 FHRFEGGVCSCGDYW 694
           +H F  G CSCGDYW
Sbjct: 787 YHHFTSGTCSCGDYW 801



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 249/497 (50%), Gaps = 27/497 (5%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML---ERNVVSWTAL 84
           L  G ++H  +    F  + +L N LI MY+KCG +  A   FD++    +R+VV+W A+
Sbjct: 23  LAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAM 82

Query: 85  MCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKA---SGVLSSVENGMQIHGMCM 140
           +  FL+NG+A+  L LF  M    +  PN  T  + + +   +G+L S+E+   IHG  +
Sbjct: 83  ISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLL-SLEDVRAIHGRIV 141

Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMF----DVMPAKSLITWNAMIAGYVLAGYSD 196
            +G E    V  +++D Y K G +++A  +F    D  P+ SL+T +AMI+     G+  
Sbjct: 142 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQ 201

Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT---VI 253
           + L LF  M   G  P   T  S L AC S+  VG  T    F++         T   V+
Sbjct: 202 ESLRLFYAMNLEGTKPSGVTLVSVLNAC-SMLPVGSAT---AFVLEQAMEVVSATRDNVL 257

Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
             +L+  Y +   L  AR  FD I+   V+SW+++   Y Q     EA+ LF ++    +
Sbjct: 258 GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGV 317

Query: 314 Q--VDGFVLS-SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
           +  V  F+ + +    +        GK+I +   +     DT+V+N+ ++MY KCG + +
Sbjct: 318 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 377

Query: 371 ATELFNEM-PV-KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSA 427
           A  +F  + P  ++ +TW  ++  YG HGL KEA  LF+ M  +  V+P+ V ++AVL A
Sbjct: 378 ARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA 437

Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIE-SMPVKPSI 486
            +    + + +E  +R+ ++      +   + +++   + G LD+A+ + + S   +  +
Sbjct: 438 STSRTSIAQGREIHARVVSNGFESDTVIQ-NALLNMYAKCGSLDDAQAIFDKSSSNQEDV 496

Query: 487 AIWQTLLSACRVHGDLE 503
             W +L++    +G  E
Sbjct: 497 IAWTSLVAGYAQYGQAE 513



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 36/441 (8%)

Query: 109 VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
           V+PN   L   + A   L ++  G +IH       FE N V+GN++I MYSKCG + +A 
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 169 RMFDVMPAKS---LITWNAMIAGYVLAGYSDKGLLLFRKMQEHG-EIPDEFTFTSTLKAC 224
           + FD +P  S   ++TWNAMI+ ++  G + + L LFR M   G   P+  TF S L +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 225 GSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF----DLIE 278
              G  S+     IHG ++ +G     +  +  +LVD Y K G L +A  VF    D   
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIER--EAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180

Query: 279 QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL------SSMMGVFADFAL 332
             S+++ S++I    Q     E++ LF  +     +  G  L       SM+ V +  A 
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAF 240

Query: 333 V-EQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
           V EQ  ++      V +  D  +  +++  Y +   +  A   F+ +   +VV+W  +  
Sbjct: 241 VLEQAMEV------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAA 294

Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ--EYFSRLCNDKR 449
            Y +H   +EA+ LF +MLL+ V P    ++  L+AC+       S   +    L  +  
Sbjct: 295 AYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 354

Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESM-PVKPSIAIWQTLLSACRVHGDLELGREV 508
           ++      +  ++   + G L +A+ + E + P +     W ++L+A   HG   LG+E 
Sbjct: 355 LEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG---LGKEA 411

Query: 509 GEILLRLDGD-----NPVNYV 524
            E+   ++ +     N V +V
Sbjct: 412 FELFQAMEAEKLVKPNKVTFV 432



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMCGF 88
           G ++H  +V  GF  D ++ N L++MYAKCG ++ A A+FDK    + +V++WT+L+ G+
Sbjct: 447 GREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGY 506

Query: 89  LQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEWN 147
            Q G A+  L LF  M    V+PN  T  + + A      +E G + + GM    G    
Sbjct: 507 AQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPA 566

Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
               + I+D+  +CGR++EA ++ +      +ITW A++
Sbjct: 567 SKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALL 605


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/569 (37%), Positives = 321/569 (56%), Gaps = 18/569 (3%)

Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM-FDVMPAKSLITWNAMIAGYVLA 192
           Q+H   +K GF+ NP+V        S    I  A  + F V  A+    ++A +   ++ 
Sbjct: 25  QLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDAR---VYDAFLFSTIIR 81

Query: 193 GYSD------KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
            Y++        +  +  M  +G  P+++ F   LKAC  L  +  G  +HG L+  GF 
Sbjct: 82  AYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFD 141

Query: 247 YSVKTVIAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
             +   +  ++V  Y  C G +  AR++FD + +   ++W+++I GYA+    A A+ LF
Sbjct: 142 DDI--FVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLF 199

Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
           R+++   +  D   + S++    D   +E GK I +Y  K        +SN++VDM+ KC
Sbjct: 200 RKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKC 259

Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
           G +D+A  LF  M  + +V+WT +I G   HG   EAV LF +M    + P+ +A++ +L
Sbjct: 260 GDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLL 319

Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
           SACSHSGLVE  ++YFS +     + P+IEHY C+VD L RAG + EA   +E MP++P+
Sbjct: 320 SACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPN 379

Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
             IW+TL+SACRVHG+L+LG  + + L+R +  +  NYV++SNI+     W +  ++R  
Sbjct: 380 PIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVA 439

Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
              KG++KV G + +E+D EIH F  GD +H    +I +++ EM + MK   G+      
Sbjct: 440 MGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRA-GYAPTTTE 498

Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
              DI EE KE++L  HSEKLAI  AL    LN  PG  IR+ KNLRVCGDCH   K +S
Sbjct: 499 VFLDIDEEDKEDALSRHSEKLAIAFAL----LNTPPGSPIRITKNLRVCGDCHSASKFIS 554

Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           KI     V+RD +RFH F  G CSCGD+W
Sbjct: 555 KIYNREIVMRDRSRFHHFRDGQCSCGDFW 583



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 201/410 (49%), Gaps = 16/410 (3%)

Query: 13  QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
           Q   D L+ C+    L    QLH  ++K+GF  + ++        +    +  A ++   
Sbjct: 8   QPCLDILQACNT---LPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFS 64

Query: 73  MLERNVVS---WTALMCGFLQNGNAKA-CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
           + +  V     ++ ++  + ++  +K   +  +  M    + PN++     +KA   L  
Sbjct: 65  VEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRD 124

Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIA 187
           +  G  +HG  +K GF+ +  V N+++ MY  C G +  A ++FD MP    +TW AMI 
Sbjct: 125 LNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIG 184

Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
           GY   G S   + LFRKMQ  G  PD+ T  S L AC  LG++  G  I  ++       
Sbjct: 185 GYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERV-- 242

Query: 248 SVKTV-IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
            +KTV ++ +LVD + KCG + +A  +F  + +++++SW+S+I+G A      EA+ LF 
Sbjct: 243 -LKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFE 301

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLK 364
           +++   +  +      ++   +   LVE+G+Q  +   +   G+   + +   +VD+  +
Sbjct: 302 EMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTR-QFGIVPKIEHYGCMVDLLSR 360

Query: 365 CGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD 413
            GL+ EA E    MP++ N + W  +I+    HG  K    + ++++ ++
Sbjct: 361 AGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNE 410



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 158/316 (50%), Gaps = 5/316 (1%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMNGACAVFDKMLERN 77
           L+ C+    L+ G  +HG+LVK GF  D+ + N ++ MY  C G M  A  +FD+M + +
Sbjct: 116 LKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLD 175

Query: 78  VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
            V+WTA++ G+ + G +   + LF +M  + V P++ T+ + + A   L ++E G  I  
Sbjct: 176 PVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIES 235

Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
              K        + N+++DM++KCG +++A  +F  M  +++++W ++I G  + G   +
Sbjct: 236 YIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLE 295

Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
            + LF +M+  G +P++  F   L AC   G V  G Q    + T  F    K    G +
Sbjct: 296 AVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEM-TRQFGIVPKIEHYGCM 354

Query: 258 VDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQV 315
           VD   + G + EA    + +  + + I W +LI        L     + +QL R   +  
Sbjct: 355 VDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHE 414

Query: 316 DGFV-LSSMMGVFADF 330
             +V LS++ G   D+
Sbjct: 415 SNYVLLSNIYGKMLDW 430


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/549 (38%), Positives = 320/549 (58%), Gaps = 8/549 (1%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I+ Y + G +  A ++FD MP + L TWNAMIAG +   ++++GL LFR+M 
Sbjct: 22  NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 81

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PDE+T  S       L SV  G QIHG+ I  G    +  V+  SL   Y++ G 
Sbjct: 82  GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL--ELDLVVNSSLAHMYMRNGK 139

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L +   V   +  +++++W++LI+G AQ       + L++ ++    + +     +++  
Sbjct: 140 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 199

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            +D A+  QG+QIHA A K+ +    +V +S++ MY KCG + +A + F+E   ++ V W
Sbjct: 200 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 259

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           + +I+ YG HG   EA+ LF  M    ++E + VA+L +L ACSHSGL ++  E F  + 
Sbjct: 260 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 319

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
                KP ++HY+C+VD LGRAG LD+A+ +I SMP+K  I IW+TLLSAC +H + E+ 
Sbjct: 320 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 379

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           + V + +L++D ++   YV+++N+HA A  W +   +RK  R K +KK AG SW E   E
Sbjct: 380 QRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 439

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD +   +++I+  L E+   MK + G+       LHD+ EE KE  L  HSEK
Sbjct: 440 VHQFKMGDRSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMDEEEKESDLVQHSEK 498

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+  AL+   L E  G  IR+ KNLRVC DCH   K +S I      +RD +RFH F  
Sbjct: 499 LAVAFALMI--LPE--GAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFIN 554

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 555 GKCSCGDYW 563



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 205/403 (50%), Gaps = 19/403 (4%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            V ++G + K  +    M +N LI+ Y + G++  A  VFD+M +R + +W A++ G +Q
Sbjct: 11  AVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQ 66

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  LSLF +M      P+E+TL +    S  L SV  G QIHG  +K G E + VV
Sbjct: 67  FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 126

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S+  MY + G++ +   +   MP ++L+ WN +I G    G  +  L L++ M+  G 
Sbjct: 127 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 186

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ TF + L +C  L   G G QIH   I  G   S    +  SL+  Y KCGCL +A
Sbjct: 187 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA--SSVVAVVSSLISMYSKCGCLGDA 244

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFAD 329
            + F   E +  + WSS+I  Y       EA+ELF  + E++ ++++     +++   + 
Sbjct: 245 AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 304

Query: 330 FALVEQGKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NV 383
             L ++G +     +  Y  K   GL       +VD+  + G +D+A  +   MP+K ++
Sbjct: 305 SGLKDKGLELFDMMVEKYGFK--PGLKHYT--CVVDLLGRAGCLDQAEAIIRSMPIKTDI 360

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           V W  +++    H  A+ A  +F+++L   ++P+  A   +L+
Sbjct: 361 VIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLA 401



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+++F  V         L  CS   +   G Q+H   +K+G S  + + + LI MY+KCG
Sbjct: 189 NKITFVTV---------LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 239

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNI 120
            +  A   F +  + + V W++++  +  +G     + LF  M   ++++ NE      +
Sbjct: 240 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 299

Query: 121 KASGVLSSVENGMQIHGMCM-KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS- 178
            A       + G+++  M + K GF+        ++D+  + G +++A  +   MP K+ 
Sbjct: 300 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 359

Query: 179 LITWNAMIAG 188
           ++ W  +++ 
Sbjct: 360 IVIWKTLLSA 369


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 337/617 (54%), Gaps = 26/617 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C+    L  G QLH   +K  F+ D ++    +DMYAKC  M  A  +FD    
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N  S+ A++ G+ Q  +    L LF ++ SS +  +E +LS   +A  ++  +  G+QI
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           +G+ +KS    +  V N+ IDMY KC  + EA R+FD M  +  ++WNA+IA +   G  
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + L LF  M      PDEFTF S LKAC   GS+G G +IH  ++ SG   +  + +  
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM--ASNSSVGC 521

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKS--------------------VISWSSLILGYAQE 295
           SL+D Y KCG + EA ++     Q++                     +SW+S+I GY  +
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           E   +A  LF ++ E  +  D F  ++++   A+ A    GKQIHA   K     D  + 
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           +++VDMY KCG + ++  +F +   ++ VTW  +I GY  HG  +EA+ LF +M+L++++
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P+ V ++++L AC+H GL+++  EYF  +  D  + P++ HYS +VD LG++G++  A  
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 761

Query: 476 LIESMPVKPSIAIWQTLLSACRVH-GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           LI  MP +    IW+TLL  C +H  ++E+  E    LLRLD  +   Y ++SN++ADAG
Sbjct: 762 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W +   LR+  R   LKK  G SWVE+  E+H F  GD  HP  E+I++ L  +   MK
Sbjct: 822 MWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881

Query: 595 --EELGFVYGVKYALHD 609
             ++  FV GV+    D
Sbjct: 882 PFDDSSFVRGVEVEEED 898



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 217/391 (55%), Gaps = 8/391 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I+ Y+K  +M  A + F+ M  R+VVSW +++ G+LQNG +   + +F  MG
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              ++ +  T +  +K    L     GMQIHG+ ++ G + + V  ++++DMY+K  R  
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E+ R+F  +P K+ ++W+A+IAG V        L  F++MQ+      +  + S L++C 
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L  +  G Q+H   + S F  +   ++  + +D Y KC  + +A+ +FD  E  +  S+
Sbjct: 293 ALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE---QGKQIHAY 342
           +++I GY+QEE+  +A+ LF +L    L  D   LS   GVF   ALV+   +G QI+  
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS---GVFRACALVKGLSEGLQIYGL 407

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A K    LD  V+N+ +DMY KC  + EA  +F+EM  ++ V+W  II  + ++G   E 
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           + LF  ML   +EPD   + ++L AC+   L
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 211/399 (52%), Gaps = 27/399 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+   R C+    L  G+Q++G  +K   S D+ + N  IDMY KC  +  A  VFD+M 
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ VSW A++    QNG     L LF  M  S ++P+EFT  + +KA     S+  GM+
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGME 503

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM----------------FDVMPAKS 178
           IH   +KSG   N  VG S+IDMYSKCG I EA ++                 + M  K 
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563

Query: 179 L----ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           L    ++WN++I+GYV+   S+   +LF +M E G  PD+FT+ + L  C +L S G G 
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  +I       V   I  +LVD Y KCG L ++R +F+   ++  ++W+++I GYA 
Sbjct: 624 QIHAQVIKKELQSDV--YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA++LF ++   +++ +     S++   A   L+++G + + Y  K   GLD  +
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 740

Query: 355 SN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
            +  ++VD+  K G +  A EL  EMP + + V W  ++
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 270/571 (47%), Gaps = 58/571 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS       G+Q+HG +V++G   D++  + L+DMYAK      +  VF  + E+N 
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+A++ G +QN      L  F +M   +   ++   ++ +++   LS +  G Q+H  
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  + +V  + +DMY+KC  + +A  +FD     +  ++NAMI GY    +  K 
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF ++   G   DE + +   +AC  +  +  G QI+G  I S    S+   +A + +
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL--SLDVCVANAAI 424

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  L EA RVFD + ++  +SW+++I  + Q     E + LF  +    ++ D F
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA------- 371
              S++      +L   G +IH+   K     ++SV  S++DMY KCG+I+EA       
Sbjct: 485 TFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 543

Query: 372 -------------TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
                         ++ N+   +  V+W  II+GY     +++A  LF +M+   + PD 
Sbjct: 544 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 603

Query: 419 VAYLAVLSACS-----------HSGLVE---ESQEYF----------------SRLCNDK 448
             Y  VL  C+           H+ +++   +S  Y                 SRL  +K
Sbjct: 604 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 663

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELG 505
            ++     ++ ++      G+ +EA  L E M    +KP+   + ++L AC   G ++ G
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723

Query: 506 REVGEILLRLDGDNP--VNYVMMSNIHADAG 534
            E   ++ R  G +P   +Y  M +I   +G
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 754



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 37/405 (9%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++E G Q H   + SGF     V N ++ +Y+       A+ +FD MP + +++WN MI 
Sbjct: 63  ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122

Query: 188 GY--------------------------VLAGY-----SDKGLLLFRKMQEHGEIPDEFT 216
           GY                          +L+GY     S K + +F  M   G   D  T
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F   LK C  L     G QIHG ++  G    V  V A +L+D Y K    VE+ RVF  
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV--VAASALLDMYAKGKRFVESLRVFQG 240

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           I +K+ +SWS++I G  Q   L+ A++ F+++++ +  V   + +S++   A  + +  G
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
            Q+HA+A K     D  V  + +DMY KC  + +A  LF+     N  ++  +ITGY + 
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPRIE 455
               +A+ LF +++   +  D ++   V  AC+   GL E  Q Y   L     +   + 
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY--GLAIKSSLSLDVC 418

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             +  +D  G+   L EA  + + M  + +++ W  +++A   +G
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 462



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 98/182 (53%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +  ++   A  L  C+       G Q+H  ++K     D+ + + L+DMY+KCG+++ + 
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+K L R+ V+W A++CG+  +G  +  + LF +M   ++KPN  T  + ++A   + 
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
            ++ G++   M MK  +  +P + +  +++D+  K G++  A  +   MP ++  + W  
Sbjct: 719 LIDKGLEYFYM-MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777

Query: 185 MI 186
           ++
Sbjct: 778 LL 779



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 29/243 (11%)

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV-------------KTVIAGSLV---- 258
            F+   K C   G++  G Q H  +I SGF  +              +  ++ S+V    
Sbjct: 50  NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109

Query: 259 ------------DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
                       + Y K   + +A   F+++  + V+SW+S++ GY Q     +++E+F 
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169

Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
            +    ++ DG   + ++ V +       G QIH    +V    D   +++++DMY K  
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229

Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
              E+  +F  +P KN V+W+ II G  ++ L   A+  F++M   +       Y +VL 
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289

Query: 427 ACS 429
           +C+
Sbjct: 290 SCA 292


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 337/617 (54%), Gaps = 26/617 (4%)

Query: 16  ADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE 75
           A  LR C+    L  G QLH   +K  F+ D ++    +DMYAKC  M  A  +FD    
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 302

Query: 76  RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
            N  S+ A++ G+ Q  +    L LF ++ SS +  +E +LS   +A  ++  +  G+QI
Sbjct: 303 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 362

Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
           +G+ +KS    +  V N+ IDMY KC  + EA R+FD M  +  ++WNA+IA +   G  
Sbjct: 363 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 422

Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
            + L LF  M      PDEFTF S LKAC   GS+G G +IH  ++ SG   +  + +  
Sbjct: 423 YETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM--ASNSSVGC 479

Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKS--------------------VISWSSLILGYAQE 295
           SL+D Y KCG + EA ++     Q++                     +SW+S+I GY  +
Sbjct: 480 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 539

Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
           E   +A  LF ++ E  +  D F  ++++   A+ A    GKQIHA   K     D  + 
Sbjct: 540 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 599

Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
           +++VDMY KCG + ++  +F +   ++ VTW  +I GY  HG  +EA+ LF +M+L++++
Sbjct: 600 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 659

Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKN 475
           P+ V ++++L AC+H GL+++  EYF  +  D  + P++ HYS +VD LG++G++  A  
Sbjct: 660 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 719

Query: 476 LIESMPVKPSIAIWQTLLSACRVH-GDLELGREVGEILLRLDGDNPVNYVMMSNIHADAG 534
           LI  MP +    IW+TLL  C +H  ++E+  E    LLRLD  +   Y ++SN++ADAG
Sbjct: 720 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 779

Query: 535 SWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMK 594
            W +   LR+  R   LKK  G SWVE+  E+H F  GD  HP  E+I++ L  +   MK
Sbjct: 780 MWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839

Query: 595 --EELGFVYGVKYALHD 609
             ++  FV GV+    D
Sbjct: 840 PFDDSSFVRGVEVEEED 856



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 217/391 (55%), Gaps = 8/391 (2%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D++  N +I+ Y+K  +M  A + F+ M  R+VVSW +++ G+LQNG +   + +F  MG
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
              ++ +  T +  +K    L     GMQIHG+ ++ G + + V  ++++DMY+K  R  
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
           E+ R+F  +P K+ ++W+A+IAG V        L  F++MQ+      +  + S L++C 
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +L  +  G Q+H   + S F  +   ++  + +D Y KC  + +A+ +FD  E  +  S+
Sbjct: 251 ALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE---QGKQIHAY 342
           +++I GY+QEE+  +A+ LF +L    L  D   LS   GVF   ALV+   +G QI+  
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS---GVFRACALVKGLSEGLQIYGL 365

Query: 343 AAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
           A K    LD  V+N+ +DMY KC  + EA  +F+EM  ++ V+W  II  + ++G   E 
Sbjct: 366 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 425

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
           + LF  ML   +EPD   + ++L AC+   L
Sbjct: 426 LFLFVSMLRSRIEPDEFTFGSILKACTGGSL 456



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 211/399 (52%), Gaps = 27/399 (6%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+   R C+    L  G+Q++G  +K   S D+ + N  IDMY KC  +  A  VFD+M 
Sbjct: 343 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 402

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
            R+ VSW A++    QNG     L LF  M  S ++P+EFT  + +KA     S+  GM+
Sbjct: 403 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGME 461

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM----------------FDVMPAKS 178
           IH   +KSG   N  VG S+IDMYSKCG I EA ++                 + M  K 
Sbjct: 462 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 521

Query: 179 L----ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
           L    ++WN++I+GYV+   S+   +LF +M E G  PD+FT+ + L  C +L S G G 
Sbjct: 522 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 581

Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQ 294
           QIH  +I       V   I  +LVD Y KCG L ++R +F+   ++  ++W+++I GYA 
Sbjct: 582 QIHAQVIKKELQSDV--YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 639

Query: 295 EENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSV 354
                EA++LF ++   +++ +     S++   A   L+++G + + Y  K   GLD  +
Sbjct: 640 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQL 698

Query: 355 SN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVII 390
            +  ++VD+  K G +  A EL  EMP + + V W  ++
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 737



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 270/571 (47%), Gaps = 58/571 (10%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           L+ CS       G+Q+HG +V++G   D++  + L+DMYAK      +  VF  + E+N 
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 204

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW+A++ G +QN      L  F +M   +   ++   ++ +++   LS +  G Q+H  
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 264

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +KS F  + +V  + +DMY+KC  + +A  +FD     +  ++NAMI GY    +  K 
Sbjct: 265 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 324

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           LLLF ++   G   DE + +   +AC  +  +  G QI+G  I S    S+   +A + +
Sbjct: 325 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL--SLDVCVANAAI 382

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  L EA RVFD + ++  +SW+++I  + Q     E + LF  +    ++ D F
Sbjct: 383 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 442

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA------- 371
              S++      +L   G +IH+   K     ++SV  S++DMY KCG+I+EA       
Sbjct: 443 TFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 501

Query: 372 -------------TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG 418
                         ++ N+   +  V+W  II+GY     +++A  LF +M+   + PD 
Sbjct: 502 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 561

Query: 419 VAYLAVLSACS-----------HSGLVE---ESQEYF----------------SRLCNDK 448
             Y  VL  C+           H+ +++   +S  Y                 SRL  +K
Sbjct: 562 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 621

Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSACRVHGDLELG 505
            ++     ++ ++      G+ +EA  L E M    +KP+   + ++L AC   G ++ G
Sbjct: 622 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681

Query: 506 REVGEILLRLDGDNP--VNYVMMSNIHADAG 534
            E   ++ R  G +P   +Y  M +I   +G
Sbjct: 682 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSG 712



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 37/405 (9%)

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
           ++E G Q H   + SGF     V N ++ +Y+       A+ +FD MP + +++WN MI 
Sbjct: 21  ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 80

Query: 188 GY--------------------------VLAGY-----SDKGLLLFRKMQEHGEIPDEFT 216
           GY                          +L+GY     S K + +F  M   G   D  T
Sbjct: 81  GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 140

Query: 217 FTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDL 276
           F   LK C  L     G QIHG ++  G    V  V A +L+D Y K    VE+ RVF  
Sbjct: 141 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV--VAASALLDMYAKGKRFVESLRVFQG 198

Query: 277 IEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG 336
           I +K+ +SWS++I G  Q   L+ A++ F+++++ +  V   + +S++   A  + +  G
Sbjct: 199 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258

Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
            Q+HA+A K     D  V  + +DMY KC  + +A  LF+     N  ++  +ITGY + 
Sbjct: 259 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 318

Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH-SGLVEESQEYFSRLCNDKRMKPRIE 455
               +A+ LF +++   +  D ++   V  AC+   GL E  Q Y   L     +   + 
Sbjct: 319 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY--GLAIKSSLSLDVC 376

Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
             +  +D  G+   L EA  + + M  + +++ W  +++A   +G
Sbjct: 377 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 420



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 98/182 (53%), Gaps = 4/182 (2%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           +  ++   A  L  C+       G Q+H  ++K     D+ + + L+DMY+KCG+++ + 
Sbjct: 557 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 616

Query: 68  AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
            +F+K L R+ V+W A++CG+  +G  +  + LF +M   ++KPN  T  + ++A   + 
Sbjct: 617 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 676

Query: 128 SVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKS-LITWNA 184
            ++ G++   M MK  +  +P + +  +++D+  K G++  A  +   MP ++  + W  
Sbjct: 677 LIDKGLEYFYM-MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 735

Query: 185 MI 186
           ++
Sbjct: 736 LL 737



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 29/235 (12%)

Query: 224 CGSLGSVGGGTQIHGFLITSGF-PYS---------------------------VKTVIA- 254
           C   G++  G Q H  +I SGF P +                           ++ V++ 
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
             +++ Y K   + +A   F+++  + V+SW+S++ GY Q     +++E+F  +    ++
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            DG   + ++ V +       G QIH    +V    D   +++++DMY K     E+  +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           F  +P KN V+W+ II G  ++ L   A+  F++M   +       Y +VL +C+
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 335/591 (56%), Gaps = 8/591 (1%)

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           SS V   +  +S+ I A     S+E    +H   +KS    +  +G+ ++  Y + G   
Sbjct: 24  SSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDV 83

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM--QEHGEIPDEFTFTSTLKA 223
            A ++FD MP + L++WN++I+GY   GY  K   +  +M   E G  P+E TF S + A
Sbjct: 84  CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143

Query: 224 CGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVI 283
           C   GS   G  IHG ++  G    VK V A   +++Y K G L  + ++F+ +  K+++
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNA--FINWYGKTGDLTSSCKLFEDLSIKNLV 201

Query: 284 SWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
           SW+++I+ + Q     + +  F   R    + D     +++    D  +V   + IH   
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261

Query: 344 AKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAV 403
                  +  ++ +++D+Y K G +++++ +F+E+   + + WT ++  Y  HG  ++A+
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321

Query: 404 GLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
             F  M+   + PD V +  +L+ACSHSGLVEE + YF  +    R+ PR++HYSC+VD 
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381

Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNY 523
           LGR+G L +A  LI+ MP++PS  +W  LL ACRV+ D +LG +  E L  L+  +  NY
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNY 441

Query: 524 VMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIH 583
           VM+SNI++ +G W +  R+R L + KGL + +G S++E   +IH F  GD +HP +EKI 
Sbjct: 442 VMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQ 501

Query: 584 QVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK 643
           + L E+ K+MK E+G+    ++ LHD+ E+ KEE +  HSEK+A+   L    L   P +
Sbjct: 502 KKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGL----LVVSPME 557

Query: 644 VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
            I + KNLR+CGDCHE  K +S I K   ++RD+ RFH F  G CSC DYW
Sbjct: 558 PIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 210/434 (48%), Gaps = 19/434 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           LH  +VK        + + L+  Y + G    A  +FD+M ER++VSW +L+ G+   G 
Sbjct: 53  LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112

Query: 94  AKACLSLFCQMGSSSV--KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
              C  +  +M  S V  +PNE T  + I A     S E G  IHG+ MK G      V 
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172

Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           N+ I+ Y K G +  + ++F+ +  K+L++WN MI  ++  G ++KGL  F   +  G  
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
           PD+ TF + L++C  +G V     IHG ++  GF  S    I  +L+D Y K G L ++ 
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF--SGNKCITTALLDLYSKLGRLEDSS 290

Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
            VF  I     ++W++++  YA      +A++ F  +    +  D    + ++   +   
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350

Query: 332 LVEQGKQIHAYAAK---VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
           LVE+GK      +K   +   LD    + +VD+  + GL+ +A  L  EMP++ +   W 
Sbjct: 351 LVEEGKHYFETMSKRYRIDPRLDH--YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408

Query: 388 VIITGYGKHGLAKEA-VGLFRKMLLDDVEP-DGVAYLAVLSACSHSGLVEESQEYFSRLC 445
            ++   G   + K+  +G      L ++EP DG  Y+ + +  S SGL +++    SR+ 
Sbjct: 409 ALL---GACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA----SRIR 461

Query: 446 NDKRMKPRIEHYSC 459
           N  + K  +    C
Sbjct: 462 NLMKQKGLVRASGC 475



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 4/173 (2%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           LR C    ++     +HG ++  GFS +  +   L+D+Y+K G +  +  VF ++   + 
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           ++WTA++  +  +G  +  +  F  M    + P+  T +  + A      VE G   +  
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH-YFE 360

Query: 139 CMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAG 188
            M   +  +P + +   ++D+  + G + +A  +   MP + S   W A++  
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/552 (36%), Positives = 319/552 (57%), Gaps = 27/552 (4%)

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F WN ++       Y +   +  A  +F+ MP + +++WNAM++GY   G+ D+   +F 
Sbjct: 27  FSWNVMLTG-----YVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFY 81

Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
           KM     + +  ++   L A    G +    ++             ++ +  +LV +   
Sbjct: 82  KM----PLKNGISWNGLLAAYVQNGRIEDAKRL------------FESKMDWTLVSWNCL 125

Query: 264 CGCLVEARR-VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
            G  V  RR +FD + Q+  ISWS++I GY+Q     EA+  F +++    +++    + 
Sbjct: 126 MGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTC 185

Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
            +   ++ A +E G+Q+H    K        V N+++ MY KCG IDEA + F E+  K+
Sbjct: 186 ALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKD 245

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
           VV+W  +I GY +HG  +EA+ +F  M    + PD    ++VL+ACSH+GLV++  EYF 
Sbjct: 246 VVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFY 305

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
            +  D  +  ++ HY+C+VD LGRAG+L+EA+NL+++MP +P  A W  LL A R+HG+ 
Sbjct: 306 SMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNT 365

Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
           ELG +  +I+  ++  N   Y+++S ++A +G W++  ++R   R+KG+KKV G SW+EV
Sbjct: 366 ELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEV 425

Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVH 622
             +IH F  GD +HP T+KI+  L EM+ ++K+E G++       HD++EE K   L+ H
Sbjct: 426 QNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQE-GYISSTNLVFHDVEEEEKVHMLKYH 484

Query: 623 SEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHR 682
           SEKLA+      G L    G+ IRV KNLRVC DCH  IK +SKI+  + ++RD  RFH 
Sbjct: 485 SEKLAVAY----GILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHY 540

Query: 683 FEGGVCSCGDYW 694
           FEGG CSC D+W
Sbjct: 541 FEGGSCSCRDFW 552



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 195/389 (50%), Gaps = 30/389 (7%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           FS+++ML       Y +  ++  A A+F++M ER++VSW A++ G+ QNG       +F 
Sbjct: 27  FSWNVMLTG-----YVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFY 81

Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSS-VENG-MQIHGMCMKSGFEWNPVVGNSIIDMYSK 160
           +M           L   I  +G+L++ V+NG ++      +S  +W  V  N ++     
Sbjct: 82  KM----------PLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMG---- 127

Query: 161 CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
            G + +   +FD MP +  I+W+AMIAGY   G S++ L  F +MQ   E  +  +FT  
Sbjct: 128 -GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCA 186

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L  C ++ ++  G Q+H  L+ +G  Y     +  +L+  Y KCG + EAR  F  I +K
Sbjct: 187 LSTCSNIAALELGRQLHCRLVKAG--YQTGWYVGNALLAMYCKCGSIDEARDAFQEILEK 244

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
            V+SW+++I GYA+     EA+ +F  ++   ++ D   + S++   +   LV+QG + +
Sbjct: 245 DVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE-Y 303

Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
            Y+     G+   + +   +VD+  + G ++EA  L   MP + +  TW  ++     HG
Sbjct: 304 FYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHG 363

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
                +G     ++ ++EP       +LS
Sbjct: 364 --NTELGEKAAQIIFEMEPHNSGMYILLS 390



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 11/200 (5%)

Query: 1   MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
           +NR SF+          +L  CS    L+ G QLH  LVK G+     + N L+ MY KC
Sbjct: 178 LNRSSFTC---------ALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKC 228

Query: 61  GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
           G ++ A   F ++LE++VVSW  ++ G+ ++G  +  L++F  M ++ ++P++ T+ + +
Sbjct: 229 GSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVL 288

Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKS 178
            A      V+ G +  + M    G     V    ++D+  + G++ EA  +   MP    
Sbjct: 289 AACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPD 348

Query: 179 LITWNAMIAGYVLAGYSDKG 198
             TW A++    + G ++ G
Sbjct: 349 AATWGALLGASRIHGNTELG 368



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 79/136 (58%), Gaps = 10/136 (7%)

Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
           ++  YL+    D A +LF++MP +++ +W V++TGY ++   K A  LF +M     E D
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM----PERD 56

Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
            V++ A+LS  + +G V+E++E F ++     +K  I  ++ ++ +  + GR+++AK L 
Sbjct: 57  IVSWNAMLSGYAQNGFVDEAREIFYKM----PLKNGIS-WNGLLAAYVQNGRIEDAKRLF 111

Query: 478 ESMPVKPSIAIWQTLL 493
           ES  +  ++  W  L+
Sbjct: 112 ES-KMDWTLVSWNCLM 126


>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
 gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
          Length = 670

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/614 (36%), Positives = 355/614 (57%), Gaps = 49/614 (7%)

Query: 120 IKASGVLSSVENGMQIHG--MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK 177
           I+  G  +++    ++H   + +       P + N +I+MY KCGR+  A  +F+ MP++
Sbjct: 67  IRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSR 126

Query: 178 SLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGS--VGGGTQ 235
           ++ TW   +A +   G   + L+ FR+M + GE PD  TF+  L A   +G+  +  G +
Sbjct: 127 NVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGRE 186

Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
           IH +   SG   +V  V+  +++  Y KCG L +AR  F+ ++ K+ ++W++++  Y  +
Sbjct: 187 IHRYARISGLLPNV--VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLD 244

Query: 296 ENLAEAMELFRQLRE--------------------------RSLQVDGFVLSSMMGVF-- 327
               EA+ELFR++ +                          RS+  D   L+   G F  
Sbjct: 245 GRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH-DTTDLAPKQGTFVT 303

Query: 328 -----ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
                A+ + ++QG+ IHA         +  VSN++V MY KCG +DEA ++F+ M +K+
Sbjct: 304 VIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKD 363

Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
            ++W  II+ Y  HG + +A+ L+++M L  V+P  V ++ +LSACSH GLV +  +YF 
Sbjct: 364 EISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFY 423

Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
           R+ +D R+KP + H+ CI+D LGR GRL EA+ +++SMP++ +   W +LL AC+ HGDL
Sbjct: 424 RMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDL 483

Query: 503 ELG-REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
           + G R   +++ R+   +   YV++SNI+A AG W + E++RK+  ++G+KK  G+SW+E
Sbjct: 484 KRGVRAADQVVDRVPWTSG-GYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 542

Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
           +   +H F  GD +HP  E+I+  L +M + MK  LG+V       HD++EE KE+ L  
Sbjct: 543 IGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMK-GLGYVPDTSSVFHDLEEEEKEDLLVC 601

Query: 622 HSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRF 680
           HSEKLAI    V G +   PGK ++R+ KNLRVC DCH   K +S+I     VVRDA RF
Sbjct: 602 HSEKLAI----VYGNM-VVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARF 656

Query: 681 HRFEGGVCSCGDYW 694
           H FE G CSC DYW
Sbjct: 657 HLFENGSCSCRDYW 670



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 193/424 (45%), Gaps = 42/424 (9%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFD--LMLNNDLIDMYAKCGEMNGACAVFDKMLER 76
           +R C     +    +LH  ++ +  S      L N LI+MY KCG +  A  +F+ M  R
Sbjct: 67  IRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSR 126

Query: 77  NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS--VENGMQ 134
           NV +WT  M  F  NG     L  F +M  S  +P+  T S  + A   + +  ++ G +
Sbjct: 127 NVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGRE 186

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH     SG   N VVG ++I MY KCGR+++A   F+ +  K+ +TWNAM+  Y L G 
Sbjct: 187 IHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGR 246

Query: 195 SDKGLLLFRKMQ---------------EHGE-----------------IPDEFTFTSTLK 222
             + L LFR+M                +HG                   P + TF + + 
Sbjct: 247 DREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVID 306

Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
            C  L ++  G  IH  +  + F      +++ +LV  Y KCGCL EA  VF  ++ K  
Sbjct: 307 VCAELSALKQGRAIHARVRATNF--DANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 364

Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
           ISW+++I  YA   +  +A+ L++++  + ++        ++   +   LV  G   + Y
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFY 423

Query: 343 AAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLA 399
             +    +  SV +   I+D+  + G + EA  +   MP++ N V W  ++     HG  
Sbjct: 424 RMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDL 483

Query: 400 KEAV 403
           K  V
Sbjct: 484 KRGV 487



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 158/359 (44%), Gaps = 56/359 (15%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
           +D G ++H      G   ++++   +I MY KCG ++ A A F+++  +N V+W A+M  
Sbjct: 181 IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 240

Query: 88  FLQNGNAKACLSLFCQM--------------------------------GSSSVKPNEFT 115
           +  +G  +  L LF +M                                 ++ + P + T
Sbjct: 241 YKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 300

Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
             T I     LS+++ G  IH     + F+ N +V N+++ MY KCG ++EA  +F  M 
Sbjct: 301 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 360

Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
            K  I+WN +I+ Y   G+SD+ LLL+++M   G  P E TF   L AC           
Sbjct: 361 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS---------- 410

Query: 236 IHGFLITSGFPY--------SVKTVIA--GSLVDFYVKCGCLVEARRVFDLIE-QKSVIS 284
            HG L+  G  Y         +K  +   G ++D   + G L EA  V   +  Q + + 
Sbjct: 411 -HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQ 469

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDG--FVLSSMMGVFADFALVEQGKQIHA 341
           W SL+       +L   +    Q+ +R     G   +LS++      +  VE+ ++I A
Sbjct: 470 WMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMA 528



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 154/327 (47%), Gaps = 46/327 (14%)

Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
           D   + + ++ CG+  ++    ++H  +++     S    +A  L++ Y KCG L  AR 
Sbjct: 59  DPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARE 118

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM--GVFADF 330
           +F+ +  ++V +W+  +  ++     +EA+  FR++ +   + D    S ++        
Sbjct: 119 LFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGA 178

Query: 331 ALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
           A ++QG++IH YA    SGL  +  V  +++ MY KCG +D+A   F E+  KN VTW  
Sbjct: 179 AAIDQGREIHRYARI--SGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNA 236

Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
           ++T Y   G  +EA+ LFR+M     + D V + A+++A +  G  +++ + +  + +  
Sbjct: 237 MMTNYKLDGRDREALELFREMH----DADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTT 292

Query: 449 RMKPRIEHYSCIVDS-----------------------------------LGRAGRLDEA 473
            + P+   +  ++D                                     G+ G LDEA
Sbjct: 293 DLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEA 352

Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHG 500
            ++  SM +K  I+ W T++S+   HG
Sbjct: 353 LDVFHSMKLKDEIS-WNTIISSYAYHG 378


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/549 (38%), Positives = 320/549 (58%), Gaps = 8/549 (1%)

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
           N +  N +I+ Y + G +  A ++FD MP + L TWNAMIAG +   ++++GL LFR+M 
Sbjct: 24  NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83

Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
             G  PDE+T  S       L SV  G QIHG+ I  G    +  V+  SL   Y++ G 
Sbjct: 84  GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDL--VVNSSLAHMYMRNGK 141

Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
           L +   V   +  +++++W++LI+G AQ       + L++ ++    + +     +++  
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201

Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
            +D A+  QG+QIHA A K+ +    +V +S++ MY KCG + +A + F+E   ++ V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261

Query: 387 TVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
           + +I+ YG HG   EA+ LF  M    ++E + VA+L +L ACSHSGL ++  E F  + 
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
                KP ++HY+C+VD LGRAG LD+A+ +I SMP+K  I IW+TLLSAC +H + E+ 
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381

Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
           + V + +L++D ++   YV+++N+HA A  W +   +RK  R K +KK AG SW E   E
Sbjct: 382 QRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 441

Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
           +H F  GD +   +++I+  L E+   MK + G+       LHD+ EE KE  L  HSEK
Sbjct: 442 VHQFKMGDRSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMDEEEKESDLVQHSEK 500

Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
           LA+  AL+   L E  G  IR+ KNLRVC DCH   K +S I      +RD +RFH F  
Sbjct: 501 LAVAFALMI--LPE--GAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFIN 556

Query: 686 GVCSCGDYW 694
           G CSCGDYW
Sbjct: 557 GKCSCGDYW 565



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 205/403 (50%), Gaps = 19/403 (4%)

Query: 31  GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
            V ++G + K  +    M +N LI+ Y + G++  A  VFD+M +R + +W A++ G +Q
Sbjct: 13  AVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQ 68

Query: 91  NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
               +  LSLF +M      P+E+TL +    S  L SV  G QIHG  +K G E + VV
Sbjct: 69  FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 128

Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
            +S+  MY + G++ +   +   MP ++L+ WN +I G    G  +  L L++ M+  G 
Sbjct: 129 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 188

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            P++ TF + L +C  L   G G QIH   I  G   S    +  SL+  Y KCGCL +A
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA--SSVVAVVSSLISMYSKCGCLGDA 246

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFAD 329
            + F   E +  + WSS+I  Y       EA+ELF  + E++ ++++     +++   + 
Sbjct: 247 AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 306

Query: 330 FALVEQGKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NV 383
             L ++G +     +  Y  K   GL       +VD+  + G +D+A  +   MP+K ++
Sbjct: 307 SGLKDKGLELFDMMVEKYGFK--PGLKHYT--CVVDLLGRAGCLDQAEAIIRSMPIKTDI 362

Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           V W  +++    H  A+ A  +F+++L   ++P+  A   +L+
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLA 403



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 12/190 (6%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           N+++F  V         L  CS   +   G Q+H   +K+G S  + + + LI MY+KCG
Sbjct: 191 NKITFVTV---------LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241

Query: 62  EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNI 120
            +  A   F +  + + V W++++  +  +G     + LF  M   ++++ NE      +
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301

Query: 121 KASGVLSSVENGMQIHGMCM-KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS- 178
            A       + G+++  M + K GF+        ++D+  + G +++A  +   MP K+ 
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 361

Query: 179 LITWNAMIAG 188
           ++ W  +++ 
Sbjct: 362 IVIWKTLLSA 371


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/625 (34%), Positives = 350/625 (56%), Gaps = 59/625 (9%)

Query: 73  MLERNVVSWTALMCGFLQN-GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN 131
           M  +  V+W +++ G  +  G  K    LF ++     +P+  + +T +      S++E 
Sbjct: 1   MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMER 56

Query: 132 GMQI-HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
                  M +K    WN     ++I  +++  ++++A  +F +MP K+++TWNAMI+GYV
Sbjct: 57  AQAFFEDMPIKDTPSWN-----TMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYV 111

Query: 191 LAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
             G  D  L LF K                                         P+  K
Sbjct: 112 ECGDLDSALKLFEKA----------------------------------------PF--K 129

Query: 251 TVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           +V+A  +++  Y+K G +  A R+F+ + +K++++W+++I GY +     + ++LFR + 
Sbjct: 130 SVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV 189

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
              +Q +   LSS +   ++ + ++ G+Q+H    K P   DT+   S++ MY KCG+++
Sbjct: 190 GFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
           +  +LF ++P ++VVTW  +I+GY +HG  K+A+GLF +M+   ++PD + ++AVL AC+
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN 309

Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
           H+G  +   +YF  +  D  +  + +HY+C+VD LGRAG+L EA +LIE MP KP  A++
Sbjct: 310 HAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVF 369

Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
            TLL ACR+H + E+     + LL LD  +   YV ++N++A    W+   R+RK  +S 
Sbjct: 370 GTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSC 429

Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
            + K  G SW+EV    H F  GD  HP    IH  L E+EK+MK   G+V  +++ALHD
Sbjct: 430 KVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLA-GYVPDLEFALHD 488

Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILK 669
           + EE KE+ L  HSEKLAI   L++      PG  IRVFKNLRVCGDCH  IK +S+I +
Sbjct: 489 VGEEQKEQLLLWHSEKLAIAYGLIK----LPPGTPIRVFKNLRVCGDCHRAIKYISQIER 544

Query: 670 LVFVVRDATRFHRFEGGVCSCGDYW 694
              +VRD TRFH F+ G CSC DYW
Sbjct: 545 REIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 11/337 (3%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +  N ++  Y +   M  A A F+ M  ++  SW  ++ GF QN        LF  M 
Sbjct: 37  DAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP 96

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
           + +V      +S  ++   + S+++       +  K+ F+ + V   ++I  Y K GRI 
Sbjct: 97  TKNVVTWNAMISGYVECGDLDSALK-------LFEKAPFK-SVVAWTAMITGYMKLGRIG 148

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
            A R+F+ MP K+L+TWNAMIAGY+    ++ G+ LFR M   G  P+  T +S L  C 
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208

Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
            L ++  G Q+H  +  S  P    T    SL+  Y KCG L +  ++F  + ++ V++W
Sbjct: 209 ELSALQLGRQVHQLVCKS--PLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTW 266

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQG-KQIHAYAA 344
           +++I GYAQ     +A+ LF ++ E+ ++ D     +++         + G K  H+ A 
Sbjct: 267 NAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK 326

Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
                        +VD+  + G + EA +L  +MP K
Sbjct: 327 DYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFK 363



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 4   VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
           V F +      L+ +L  CS+   L  G Q+H  + K     D      LI MY KCG +
Sbjct: 189 VGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVL 248

Query: 64  NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
                +F ++  R+VV+W A++ G+ Q+G  K  L LF +M    +KP+  T    + A 
Sbjct: 249 EDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMAC 308

Query: 124 GVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKS 178
                 + G++  H M    G    P     ++D+  + G++ EA  + + MP K 
Sbjct: 309 NHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKP 364


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/559 (36%), Positives = 324/559 (57%), Gaps = 16/559 (2%)

Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
           F  +P +   +I+ Y+    +  A ++FD  P K++  WNAM+    LA + ++ L    
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 204 KMQEHGEIPDEFTFTSTLKAC-----GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
            M   G   D +++   LKAC       L +     ++H   I  G  Y + T +A +L+
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRG--YGLHTHVATTLI 397

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL--RERSLQVD 316
           D Y K G +  A RVF  +  ++++SWS++I  YA+ E   +A+++F+++   +  L  +
Sbjct: 398 DCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPN 457

Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
              + S++   A    + QGK +HAY  +    L  SV N+++ MY+KCG ++    +FN
Sbjct: 458 SITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFN 517

Query: 377 EM-PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
            +   +NVV+W  +I+GYG HG  +E++ +F +M+ + + P+ + +++VL ACSH GLVE
Sbjct: 518 WIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVE 577

Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
           + ++ F  +  +  + PR EHY+C+VD LGRAGRLDEA  LI+SM ++PS  +W +LL A
Sbjct: 578 QGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGA 636

Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
           CR+HG +E        L  L+  N  NYV++++I+A A   N+ + L++L     L+KV 
Sbjct: 637 CRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVP 696

Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
           G SW+EV K+++ F   D+ +P  E++  ++ E   +MK E G+V   +  L+DI+EE K
Sbjct: 697 GCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNE-GYVPDTRSVLYDIEEEEK 755

Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
           E  L  HSEKLA+   L++ G     G+ IR+ KNLR+C DCH   K +SK      VVR
Sbjct: 756 ERILLGHSEKLAVAFGLIKTG----SGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVR 811

Query: 676 DATRFHRFEGGVCSCGDYW 694
           D  RFH F  GVCSC DYW
Sbjct: 812 DVNRFHHFRNGVCSCRDYW 830



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 177/364 (48%), Gaps = 11/364 (3%)

Query: 43  FSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFC 102
           F  D  L+  LI+ YA    +  A  VFD+   +N+  W A++       + +  L+   
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339

Query: 103 QMGSSSVKPNEFTLSTNIKA-----SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
            MG   V  + ++ +  +KA     +  L +     ++H   ++ G+  +  V  ++ID 
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE--IPDEF 215
           Y+K G ++ A R+F  MP ++L++W+AMI  Y         + +F++M       +P+  
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459

Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
           T  S L AC  + ++G G  +H +++  GF   V  +   +L+  Y+KCGCL   R +F+
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVL--NALMAMYMKCGCLETGRYIFN 517

Query: 276 LI-EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
            I  +++V+SW+SLI GY       E++++F ++ E  +  +     S++G  +   LVE
Sbjct: 518 WIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVE 577

Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGY 393
           QGK++     +            +VD+  + G +DEA EL   M ++ +   W  ++   
Sbjct: 578 QGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGAC 637

Query: 394 GKHG 397
             HG
Sbjct: 638 RIHG 641



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 135/261 (51%), Gaps = 6/261 (2%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
           ++H   ++ G+     +   LID YAK G ++ A  VF  M +RN+VSW+A++  + +N 
Sbjct: 376 EMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNE 435

Query: 93  NAKACLSLFCQMGSSSVK--PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
                + +F +M +S     PN  T+ + + A   ++++  G  +H   ++ GF+    V
Sbjct: 436 RPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSV 495

Query: 151 GNSIIDMYSKCGRINEAARMFD-VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
            N+++ MY KCG +     +F+ +   +++++WN++I+GY + G+  + L +F +M E G
Sbjct: 496 LNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEG 555

Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
             P+  TF S L AC  +G V  G ++   ++   +  + +      +VD   + G L E
Sbjct: 556 ISPNIITFVSVLGACSHVGLVEQGKKLFESMVE--YNVTPRAEHYACMVDLLGRAGRLDE 613

Query: 270 ARRVFDLIE-QKSVISWSSLI 289
           A  +   +  Q S   W SL+
Sbjct: 614 AVELIQSMRIQPSPQVWGSLL 634



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 10/193 (5%)

Query: 8   LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
           LV     +   L  C+    L  G  LH  +++ GF   + + N L+ MY KCG +    
Sbjct: 454 LVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGR 513

Query: 68  AVFDKM-LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
            +F+ +   RNVVSW +L+ G+  +G  +  L +F +M    + PN  T  + + A   +
Sbjct: 514 YIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHV 573

Query: 127 SSVENGMQIHGMCMKSGFEWN--PVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLIT 181
             VE G ++     +S  E+N  P   +   ++D+  + GR++EA  +   M  + S   
Sbjct: 574 GLVEQGKKL----FESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQV 629

Query: 182 WNAMIAGYVLAGY 194
           W +++    + G+
Sbjct: 630 WGSLLGACRIHGH 642


>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/626 (34%), Positives = 354/626 (56%), Gaps = 19/626 (3%)

Query: 73  MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
           ML ++ +      C FL   + +     F  + +    P   TL  ++K+S   SSV   
Sbjct: 13  MLLKHQLKPLTYCCSFLSQTSLQ-----FNAISTHHFDPFLSTLILHLKSS---SSVSIC 64

Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
             IH   +KS    +  +G+ ++  Y K G   +A  +FD MP K  ++WN++++G    
Sbjct: 65  RIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKI 124

Query: 193 GYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
           G   + L +F KM+   E+  +EFTF S + AC S  +   G  +H   +  G  Y VK 
Sbjct: 125 GQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKV 184

Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
           V   +LV+ Y K G +  A R+F  +   +KS++SW+S++   AQ     EA   F  +R
Sbjct: 185 V--NALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMR 242

Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
                 D   + S++    +F L    + +H          + ++  +++++Y K G ++
Sbjct: 243 VNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLN 302

Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSAC 428
            + ++F E+   + V WT ++ GY  HG  KEA+  F +++ ++ +EPD V +  +LSAC
Sbjct: 303 NSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSAC 362

Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
           SHSGLV+E + +F  + +  +++PR++HYSC+VD LGR G LD+A  LI++MP +P+  +
Sbjct: 363 SHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGV 422

Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
           W  LL ACRVH +++LG+E  + L+ LD  +P NY+M+SN+++ AG WN+  ++R L ++
Sbjct: 423 WGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKN 482

Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
           K L +  G S++E   +IH F   D THP + +IH+ L E+ K++ +++GFV+  +  LH
Sbjct: 483 KVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKI-QDVGFVHETESILH 541

Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
           D+ EE K + +  HSEK+A+   L    L       + + KNLR+C DCH  +K +S + 
Sbjct: 542 DVDEEVKIDMITKHSEKIALAYGL----LVTNADMPLVIIKNLRICRDCHNTVKFVSMVE 597

Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
           K   ++RD  RFH+F GG+CSCGDYW
Sbjct: 598 KRTIIIRDTKRFHQFSGGLCSCGDYW 623



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 212/417 (50%), Gaps = 19/417 (4%)

Query: 34  LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
           +H  ++K     D  + + L+  Y K G    A  +FD+M +++ VSW +L+ G  + G 
Sbjct: 67  IHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQ 126

Query: 94  AKACLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
              CLS+FC+M S S +K NEFT  + I A     + + G  +H   MK G  +   V N
Sbjct: 127 LGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVN 186

Query: 153 SIIDMYSKCGRINEAARMFDVMP--AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
           ++++MY K G +  A R+F  MP   KS+++WN+++A     G  ++    F  M+ +G 
Sbjct: 187 ALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGF 246

Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
            PD+ T  S L+AC +         +HG + T G   ++   I  +L++ Y K G L  +
Sbjct: 247 FPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENL--TIVTTLLNLYSKLGRLNNS 304

Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF-RQLRERSLQVDGFVLSSMMGVFAD 329
           R+VF+ I +   ++W++++ GYA      EA+E F R +RE  ++ D    + ++   + 
Sbjct: 305 RKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSH 364

Query: 330 FALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
             LV++GK   ++ +   KV   LD    + +VD+  +CGL+D+A EL   MP + N   
Sbjct: 365 SGLVKEGKYFFRVMSDVYKVQPRLDH--YSCMVDLLGRCGLLDDAHELIKNMPFEPNSGV 422

Query: 386 WTVIITGYGKH---GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
           W  ++     H    L KEA      + LD  +P    Y+ + +  S +GL  ++ +
Sbjct: 423 WGALLGACRVHRNIDLGKEAAK--NLIALDPSDPRN--YIMLSNMYSAAGLWNDASK 475



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 8/250 (3%)

Query: 29  DYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML--ERNVVSWTALMC 86
           D G  +H   +K+G  +++ + N L++MY K G +  A  +F +M   E+++VSW +++ 
Sbjct: 164 DEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVA 223

Query: 87  GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
              QNG      + F  M  +   P++ T+ + ++A            +HG+    G + 
Sbjct: 224 VCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDE 283

Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF-RKM 205
           N  +  +++++YSK GR+N + ++F+ +     + W AM+AGY + G   + +  F R +
Sbjct: 284 NLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIV 343

Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AGSLVDFYVK 263
           +E G  PD  TFT  L AC   G V  G     F + S   Y V+  +     +VD   +
Sbjct: 344 REEGMEPDHVTFTHLLSACSHSGLVKEGKYF--FRVMSDV-YKVQPRLDHYSCMVDLLGR 400

Query: 264 CGCLVEARRV 273
           CG L +A  +
Sbjct: 401 CGLLDDAHEL 410


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/649 (33%), Positives = 344/649 (53%), Gaps = 65/649 (10%)

Query: 104 MGSSSVKPNE---FTLSTNIKASGVLSSVENGM---QIHGMCMKSGFEWNPVVGNSIIDM 157
           M S+   PN    F+    +  S   +S +      Q+H + +K+G   +P+    +I  
Sbjct: 1   MNSTIYNPNRTFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60

Query: 158 YSKCGR-INEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK-----GLLLFRKMQEHGEI 211
            +   R I+ A  +F  MP  +   WN ++   VLA  +D+      L+LF  M   G +
Sbjct: 61  CAFSSRDIDYARAVFRQMPEPNCFCWNTILR--VLAETNDEHLQSEALMLFSAMLCDGRV 118

Query: 212 -PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF----------------------PYS 248
            P+ FTF S LKAC     +  G QIHG ++  GF                       YS
Sbjct: 119 KPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYS 178

Query: 249 V-----------------------KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
           +                         V+   ++D  V+ G +  A+ +FD + Q+SV+SW
Sbjct: 179 LFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSW 238

Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
           + +I GYAQ  +  EA+ LF++++  ++  +   L S++   A    +E GK IH YA K
Sbjct: 239 NVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGK 298

Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
               +D  + +++VDMY KCG IDEA ++F  +P +N +TW+ II  +  HG A++A+  
Sbjct: 299 NKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIH 358

Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
           F  M    V P+ VAY+ +LSACSH+GLVEE + +FS +     ++PRIEHY C+VD LG
Sbjct: 359 FHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLG 418

Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
           RAG L+EA+ LI +MP++P   IW+ LL AC++H +L++G  V E L+ L   +  +YV 
Sbjct: 419 RAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVA 478

Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
           +SN++A  G+W    R+R   +   ++K  G SW+E+   IH F   DD+H   ++I  +
Sbjct: 479 LSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAM 538

Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
           L EM  +++   G+         +  E+ +  +L+ HSEK+A+   L+    +  P   +
Sbjct: 539 LGEMSMKLRSN-GYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLI----STAPQHPL 593

Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           ++ KNLR+C DCH  +K +S I K   +VRD  RFH+FE G CSC DYW
Sbjct: 594 KIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 185/419 (44%), Gaps = 58/419 (13%)

Query: 33  QLHGALVKMGFSFDLMLNNDLIDMYA-KCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
           QLH   +K G   D +   ++I   A    +++ A AVF +M E N   W  ++    + 
Sbjct: 37  QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAET 96

Query: 92  GN---AKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
            +       L LF  M     VKPN FT  + +KA    S +  G QIHG+ +K GF  +
Sbjct: 97  NDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHED 156

Query: 148 PVVGNSIIDMYSKC---------------------------------------------- 161
             V ++++ MY  C                                              
Sbjct: 157 EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVR 216

Query: 162 -GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
            G I  A  +FD MP +S+++WN MI+GY   G+  + + LF++MQ     P+  T  S 
Sbjct: 217 LGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSV 276

Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
           L A   +G++  G  IH  L        +  V+  +LVD Y KCG + EA +VF+ + ++
Sbjct: 277 LPAIARIGALELGKWIH--LYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKR 334

Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
           + I+WS++I  +A      +A+  F  + +  +  +      ++   +   LVE+G+   
Sbjct: 335 NAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFF 394

Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
           ++  KV  GL   + +   +VD+  + G ++EA EL   MP++ + V W  ++     H
Sbjct: 395 SHMVKV-VGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 163/347 (46%), Gaps = 62/347 (17%)

Query: 2   NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
           NR +F  V         L+ C++   L  G Q+HG +VK GF  D  + ++L+ MY  C 
Sbjct: 121 NRFTFPSV---------LKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCA 171

Query: 62  EM--------------NGACA---------------------------------VFDKML 74
            M              +G+C                                  +FD+M 
Sbjct: 172 VMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMP 231

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           +R+VVSW  ++ G+ QNG+    ++LF +M SS++ PN  TL + + A   + ++E G  
Sbjct: 232 QRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKW 291

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IH    K+  E + V+G++++DMYSKCG I+EA ++F+ +P ++ ITW+A+I  + + G 
Sbjct: 292 IHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGR 351

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI-TSGFPYSVKTVI 253
           ++  ++ F  M + G  P++  +   L AC   G V  G      ++   G    ++   
Sbjct: 352 AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHY- 410

Query: 254 AGSLVDFYVKCGCLVEARRVFD--LIEQKSVISWSSLILGYAQEENL 298
            G +VD   + G L EA  +     IE   VI W +L+      +NL
Sbjct: 411 -GCMVDLLGRAGHLEEAEELIRNMPIEPDDVI-WKALLGACKMHKNL 455


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/662 (31%), Positives = 347/662 (52%), Gaps = 80/662 (12%)

Query: 107 SSVKPNEFTLSTNIKASGV-------------LSSVENGMQIHGMCMKSGFEWNPVVGNS 153
           S  KP +F+   NI  S +             ++S++   Q+H + ++SG   +  V  +
Sbjct: 11  SPFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGA 70

Query: 154 IIDMYSKC--GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
           ++  Y+       + A ++F  +P  ++  WN +I G +      K +  + +M      
Sbjct: 71  LLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR- 129

Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG---------------- 255
           P++FT+ +  KAC    +V  G QIHG ++  G    V    AG                
Sbjct: 130 PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKM 189

Query: 256 ------------SLVDFYVKCGCLV-------------------------------EARR 272
                       +++D Y+KCG L                                +AR+
Sbjct: 190 FYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARK 249

Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
           +FD + ++  ISWSS++ GY       EA+E+F+Q++    +   F+LSS++   ++   
Sbjct: 250 LFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGA 309

Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
           ++QG+ +HAY  +    LD  +  +++DMY KCG +D   E+F EM  + + TW  +I G
Sbjct: 310 IDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
              HG A++A+ LF K+    ++P+G+  + VL+AC+H+G V++    F  +     + P
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDP 429

Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
            +EHY C+VD LGR+G   EA++LI SMP+KP+ A+W  LL ACR+HG+ +L   VG+IL
Sbjct: 430 ELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKIL 489

Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
           L L+  N   YV++SNI+A  G +++  ++RKL +++G+K V G S V+++  +H F  G
Sbjct: 490 LELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMG 549

Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
           D +HP  ++I++ L  +++R+ +  G        L DI EE KE ++  HSEKLAI   L
Sbjct: 550 DGSHPQMKEIYRKLKIIKERL-QMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGL 608

Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
           +    N  PGK I + KNLRVC DCH   K +S+I     +VRD  R+H F+ G CSC D
Sbjct: 609 I----NTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKD 664

Query: 693 YW 694
           +W
Sbjct: 665 FW 666



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 210/468 (44%), Gaps = 78/468 (16%)

Query: 28  LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC--GEMNGACAVFDKMLERNVVSWTALM 85
           L Y  QLH  +++ G   D  ++  L+  YA       + A  VF  +   NV  W  ++
Sbjct: 46  LQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVI 105

Query: 86  CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGF- 144
            G L+N      +  + +M     +PN+FT  T  KA  V  +V+ G QIHG  +K G  
Sbjct: 106 KGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIG 164

Query: 145 -----------------------------EWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
                                        E + V  N++ID Y KCG +  A  +F  MP
Sbjct: 165 SDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224

Query: 176 AKSL-------------------------------ITWNAMIAGYVLAGYSDKGLLLFRK 204
            K++                               I+W++M+ GY+ AG   + L +F++
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284

Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
           MQ     P  F  +S L AC ++G++  G  +H +L  +     +  V+  +L+D Y KC
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI--KLDAVLGTALLDMYAKC 342

Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
           G L     VF+ ++++ + +W+++I G A      +A+ELF +L+E  ++ +G  L  ++
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402

Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK- 381
              A    V++G +I     +   G+D  + +   +VD+  + GL  EA +L N MP+K 
Sbjct: 403 TACAHAGFVDKGLRIFQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKP 461

Query: 382 NVVTWTVIITGYGKHG---LAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
           N   W  ++     HG   LA E VG   K+LL ++EP       +LS
Sbjct: 462 NAAVWGALLGACRIHGNFDLA-ERVG---KILL-ELEPQNSGRYVLLS 504



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 11/315 (3%)

Query: 51  NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
           N +I+  AK G +  A  +FD+M ER+ +SW++++ G++  G  K  L +F QM     +
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETR 291

Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
           P  F LS+ + A   + +++ G  +H    ++  + + V+G +++DMY+KCGR++    +
Sbjct: 292 PGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEV 351

Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
           F+ M  + + TWNAMI G  + G ++  L LF K+QE    P+  T    L AC   G V
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411

Query: 231 GGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARRVFDLIEQK-SVISWSS 287
             G +I  F     F Y V   +   G +VD   + G   EA  + + +  K +   W +
Sbjct: 412 DKGLRI--FQTMREF-YGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGA 468

Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDG-FVLSSMMGVFADFALVEQGKQIHAYAAKV 346
           L+       N   A  + + L E   Q  G +VL S   ++A     +   +I       
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS--NIYAKVGRFDDVSKIRKLMKN- 525

Query: 347 PSGLDTSVSNSIVDM 361
             G+ T    SIVD+
Sbjct: 526 -RGIKTVPGVSIVDL 539



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           L+  L  CS    +D G  +H  L +     D +L   L+DMYAKCG ++    VF++M 
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
           ER + +W A++ G   +G A+  L LF ++    +KPN  TL   + A      V+ G++
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416

Query: 135 IHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVL 191
           I    M+  +  +P + +   ++D+  + G  +EA  + + MP K +   W A++    +
Sbjct: 417 IF-QTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRI 475

Query: 192 AGYSD 196
            G  D
Sbjct: 476 HGNFD 480


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/597 (35%), Positives = 337/597 (56%), Gaps = 14/597 (2%)

Query: 98  LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
           L L+  M  S +KP+  T    IKA    S    G+ +H   +KSGFE +  + +S+I +
Sbjct: 180 LPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHL 239

Query: 158 YSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTF 217
           Y+    +  A ++F++  A+ +++WNAMI GYV         ++F +M       D  ++
Sbjct: 240 YANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV----CRDVISW 295

Query: 218 TSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLI 277
            + +     +G +    ++   +       S  +++AG     +VKCG + +A  +F  +
Sbjct: 296 NTMINGYAIVGKIDEAKRLFDEMPERNL-VSWNSMLAG-----FVKCGNVEDAFGLFSEM 349

Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
             + V+SW+S++  YAQ     EA+ LF Q+R   ++     + S++   A    +++G 
Sbjct: 350 PCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGL 409

Query: 338 QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHG 397
            +H Y       +++ V  ++VDMY KCG I  AT++FN M  K+V+ W  II G   HG
Sbjct: 410 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 469

Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY 457
             KEA  LF++M    VEP+ + ++A+LSACSH+G+V+E Q+    + +   ++P++EHY
Sbjct: 470 NVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 529

Query: 458 SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDG 517
            C++D L RAG L+EA  LI +MP++P+ +    LL  CR+HG+ ELG  VG+ L+ L  
Sbjct: 530 GCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQP 589

Query: 518 DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHP 577
            +   Y+++SNI+A A  W++  ++R L +  G+ KV G S +E+   +H F  GD +HP
Sbjct: 590 CHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHP 649

Query: 578 LTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGL 637
            + KI++ L E+  R+K  +G+       L D++EE KE +L VHSEKLAI   L    L
Sbjct: 650 ESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGL----L 705

Query: 638 NEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
           +    + IR+ KNLRVC DCH  IK +SK+     +VRD  RFH FE G CSC D+W
Sbjct: 706 HLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 201/382 (52%), Gaps = 14/382 (3%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+++ +  +G+ +H  +VK GF  D  + + LI +YA   ++  A  +F+    R+V
Sbjct: 202 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 261

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           VSW A++ G++++        +F +M    V     + +T I    ++  ++   ++   
Sbjct: 262 VSWNAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRL--- 314

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
                 E N V  NS++  + KCG + +A  +F  MP + +++WN+M+A Y   G  ++ 
Sbjct: 315 -FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEA 373

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF +M+  G  P E T  S L AC  LG++  G  +H ++  +     V +++  +LV
Sbjct: 374 LALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRI--EVNSIVGTALV 431

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KCG +  A +VF+ +E K V++W+++I G A   N+ EA +LF++++E  ++ +  
Sbjct: 432 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 491

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
              +++   +   +V++G+++         G++  V +   ++D+  + G ++EA EL  
Sbjct: 492 TFVAILSACSHAGMVDEGQKL-LDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIG 550

Query: 377 EMPVK-NVVTWTVIITGYGKHG 397
            MP++ N      ++ G   HG
Sbjct: 551 TMPMEPNPSALGALLGGCRIHG 572



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/310 (20%), Positives = 137/310 (44%), Gaps = 18/310 (5%)

Query: 188 GYVLAGYSDKGLL--LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS-G 244
           G+ L G+SD  L   + R        P      S    C +L  +    Q+H  +IT   
Sbjct: 68  GFGLGGWSDAKLQSSMSRTPNPLTNPPSNPQILSLFNPCKTLRHL---KQVHAQIITHHN 124

Query: 245 FPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMEL 304
            P+ +  + + S +  +     L  A+ +F  ++      ++SLI   +  +   EA+ L
Sbjct: 125 SPFQLSALASLSALSPFPTF--LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPL 182

Query: 305 FRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLK 364
           +  + +  L+ D      ++    + ++   G  +H +  K     D+ + +S++ +Y  
Sbjct: 183 YHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYAN 242

Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
              +  A +LFN    ++VV+W  +I GY KH     A  +F +M+  DV    +++  +
Sbjct: 243 GKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTM 298

Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKP 484
           ++  +  G ++E++  F     D+  +  +  ++ ++    + G +++A  L   MP + 
Sbjct: 299 INGYAIVGKIDEAKRLF-----DEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCR- 352

Query: 485 SIAIWQTLLS 494
            +  W ++L+
Sbjct: 353 DVVSWNSMLA 362


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/582 (34%), Positives = 327/582 (56%), Gaps = 2/582 (0%)

Query: 15  LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
           LA  L  C+    L  GVQLH   VK G   ++ + N L+ MYAKC  +  A  +F  M 
Sbjct: 251 LACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP 310

Query: 75  ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
             ++V+W  ++ G +QNG     L LFC M  S ++P+  TL++ + A   L+  + G +
Sbjct: 311 RDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKE 370

Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
           IHG  +++    +  + ++++D+Y KC  +  A  +FD   +  ++  + MI+GYVL   
Sbjct: 371 IHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRM 430

Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
           S+  + +FR +   G  P+     STL AC S+ ++  G ++HG+++ +   Y  +  + 
Sbjct: 431 SEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNA--YEGRCYVE 488

Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
            +L+D Y KCG L  +  +F  +  K  ++W+S+I  +AQ     EA++LFRQ+    ++
Sbjct: 489 SALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVK 548

Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
            +   +SS++   A    +  GK+IH    K P   D    ++++DMY KCG ++ A  +
Sbjct: 549 YNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRV 608

Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
           F  MP KN V+W  II+ YG HGL KE+V L   M  +  + D V +LA++SAC+H+G V
Sbjct: 609 FEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQV 668

Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
           +E    F  +  +  ++P++EH SC+VD   RAG+LD+A   I  MP KP   IW  LL 
Sbjct: 669 QEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLH 728

Query: 495 ACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKV 554
           ACRVH ++EL     + L +LD  N   YV+MSNI+A AG W+   ++R+L + K ++K+
Sbjct: 729 ACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKI 788

Query: 555 AGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
            G SWV+V+   H F   D  HP +E+I+  L  +   +K+E
Sbjct: 789 PGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQE 830



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 256/482 (53%), Gaps = 4/482 (0%)

Query: 19  LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
           ++ C+    L  G  +H     +G   D+ + + LI MYA  G ++GA  VFD M ER+ 
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213

Query: 79  VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
           V W  +M G+++ G+  + + LF  M +S   PN  TL+  +      + + +G+Q+H +
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273

Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
            +K G E    V N+++ MY+KC  + EA R+F +MP   L+TWN MI+G V  G  D  
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDA 333

Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
           L LF  MQ+ G  PD  T  S L A   L     G +IHG+++ +     V   +  +LV
Sbjct: 334 LRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNC--AHVDVFLVSALV 391

Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
           D Y KC  +  A+ VFD  +   V+  S++I GY        A+++FR L    ++ +  
Sbjct: 392 DIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAV 451

Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
           +++S +   A  A +  G+++H Y  K        V ++++DMY KCG +D +  +F++M
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKM 511

Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
             K+ VTW  +I+ + ++G  +EA+ LFR+M+++ V+ + V   ++LSAC+    +   +
Sbjct: 512 SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGK 571

Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
           E    +     ++  +   S ++D  G+ G L+ A  + E MP K  ++ W +++SA   
Sbjct: 572 EIHGIIIKGP-IRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS-WNSIISAYGA 629

Query: 499 HG 500
           HG
Sbjct: 630 HG 631



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 238/500 (47%), Gaps = 14/500 (2%)

Query: 14  RLADSLRCCSKNLLLDYGVQLHGALVKMGF-----SFDLMLNNDLIDMYAKCGEMNGACA 68
           RL   LR C     L  G+++H   V  G           L   L+ MY        A A
Sbjct: 38  RLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVA 97

Query: 69  VFDKM---LERNVVSWTALMCGFLQNGNAKACLSLFCQMGS--SSVKPNEFTLSTNIKAS 123
           VF  +        + W  L+ GF   G+ +  +  + +M +  SS +P+  TL   +K+ 
Sbjct: 98  VFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSC 157

Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
             L ++  G  +H      G + +  VG+++I MY+  G ++ A  +FD M  +  + WN
Sbjct: 158 AALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWN 217

Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
            M+ GYV AG     + LFR M+  G  P+  T    L  C +   +  G Q+H   +  
Sbjct: 218 VMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKY 277

Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
           G    V   +A +LV  Y KC CL EA R+F L+ +  +++W+ +I G  Q   + +A+ 
Sbjct: 278 GLEPEV--AVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335

Query: 304 LFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYL 363
           LF  +++  LQ D   L+S++    +    +QGK+IH Y  +  + +D  + +++VD+Y 
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395

Query: 364 KCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLA 423
           KC  +  A  +F+     +VV  + +I+GY  + +++ AV +FR +L   ++P+ V   +
Sbjct: 396 KCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAS 455

Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVK 483
            L AC+    +   QE    +  +   + R    S ++D   + GRLD +  +   M  K
Sbjct: 456 TLPACASMAAMRIGQELHGYVLKNA-YEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK 514

Query: 484 PSIAIWQTLLSACRVHGDLE 503
             +  W +++S+   +G+ E
Sbjct: 515 DEVT-WNSMISSFAQNGEPE 533


>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/652 (33%), Positives = 342/652 (52%), Gaps = 47/652 (7%)

Query: 46  DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
           D +  N +I     C +   A  +FD+M +RN +SWT ++ GFL  G        F  M 
Sbjct: 120 DTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMP 179

Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
                                              K    WN     ++++ Y   GR+N
Sbjct: 180 YVD--------------------------------KDVATWN-----AMVNGYCNNGRVN 202

Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKAC 224
           +A R+F  MP++ +I+W ++I G    G S + L  F+ M     +     T    L A 
Sbjct: 203 DALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAA 262

Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
             +     G QIH  +   GF   +   ++ SLV FY  C  + +A +VF     K+V+ 
Sbjct: 263 AKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVV 322

Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA 344
           W++L+ G    +   EA+E+F ++   ++  +    +S +        +E+G+ IHA  A
Sbjct: 323 WTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHA--A 380

Query: 345 KVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEA 402
            +  GL+ +V   NS+V MY KCG I +A  +F  +  KNVV+W  +I G  +HG    A
Sbjct: 381 GIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWA 440

Query: 403 VGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVD 462
           + LF++ML + VE D +    +LSACS SG++++++ +F      + MK  +EHY+C+VD
Sbjct: 441 LVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVD 500

Query: 463 SLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVN 522
            LGR G ++EA+ L  SMPV+ +  +W  LLSACRVH  L++     + +  ++ D    
Sbjct: 501 VLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAA 560

Query: 523 YVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKI 582
           YV++SN++A +  W E  R+R   +  G+ K  G SW+ +    H F   D +HPLTE+I
Sbjct: 561 YVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEI 620

Query: 583 HQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPG 642
           ++ L+ +  +++ ELG++   ++ALHD++ E  EE L  HSE+LAI   L    L+   G
Sbjct: 621 YEKLVWLGVKLR-ELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGL----LSTVEG 675

Query: 643 KVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
             I + KNLRVCGDCH  I  ++KI+    VVRD++RFH F+ G+CSCGDYW
Sbjct: 676 STITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 9/250 (3%)

Query: 27  LLDY--GVQLHGALVKMGF--SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
           +LD+  G+Q+H  + K GF    D  ++  L+  YA C  M  AC VF + + +NVV WT
Sbjct: 265 ILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWT 324

Query: 83  ALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
           AL+ G   N      L +F +M   +V PNE + ++ + +   L  +E G  IH   +K 
Sbjct: 325 ALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKM 384

Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF 202
           G E     GNS++ MYSKCG I +A  +F  +  K++++WN++I G    G     L+LF
Sbjct: 385 GLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLF 444

Query: 203 RKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDF 260
           ++M   G   DE T T  L AC   G +       G+        S+K  +     +VD 
Sbjct: 445 KEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYF---ARKRSMKLTVEHYACMVDV 501

Query: 261 YVKCGCLVEA 270
             +CG + EA
Sbjct: 502 LGRCGEVEEA 511



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 27/158 (17%)

Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
           P    TS++ + ++ +LK   +D A  +FN++P  +V  +T ++  Y  +    EA+ LF
Sbjct: 53  PKSSSTSLNFTFLN-HLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLF 111

Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND--------KRMKPRIE-HY 457
            +  +     D +++ +V+ A              S +CND          M  R    +
Sbjct: 112 NQ--IPSNTKDTISWNSVIKA--------------SIICNDFVTAVKLFDEMPQRNSISW 155

Query: 458 SCIVDSLGRAGRLDEAKNLIESMP-VKPSIAIWQTLLS 494
           + I+      GR++EA+    +MP V   +A W  +++
Sbjct: 156 TTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVN 193


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.137    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,671,859,795
Number of Sequences: 23463169
Number of extensions: 442764245
Number of successful extensions: 1285238
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8990
Number of HSP's successfully gapped in prelim test: 2924
Number of HSP's that attempted gapping in prelim test: 1065093
Number of HSP's gapped (non-prelim): 64270
length of query: 694
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 544
effective length of database: 8,839,720,017
effective search space: 4808807689248
effective search space used: 4808807689248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)