BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005481
(694 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/687 (61%), Positives = 525/687 (76%), Gaps = 3/687 (0%)
Query: 10 SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
++RQ L LR C++ L D G Q+H L+K G +L+ +N LIDMY KC E A V
Sbjct: 4 NQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 70 FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
FD M ERNVVSW+ALM G + NG+ K LSLF +MG + PNEFT STN+KA G+L+++
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
E G+QIHG C+K GFE VGNS++DMYSKCGRINEA ++F + +SLI+WNAMIAG+
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 190 VLAGYSDKGLLLFRKMQEHG--EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
V AGY K L F MQE E PDEFT TS LKAC S G + G QIHGFL+ SGF
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
I GSLVD YVKCG L AR+ FD I++K++ISWSSLILGYAQE EAM LF++
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
L+E + Q+D F LSS++GVFADFAL+ QGKQ+ A A K+PSGL+TSV NS+VDMYLKCGL
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
+DEA + F EM +K+V++WTV+ITGYGKHGL K++V +F +ML ++EPD V YLAVLSA
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
CSHSG+++E +E FS+L +KPR+EHY+C+VD LGRAGRL EAK+LI++MP+KP++
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
IWQTLLS CRVHGD+ELG+EVG+ILLR+D NP NYVMMSN++ AG WNE R+L
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGN 543
Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
KGLKK AG SWVE+++E+HFF G+D+HPLT I + L E E+R++EELG+VYG+K+ L
Sbjct: 544 IKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL 603
Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKI 667
HDI +ESKEE+LR HSEKLAIGLAL GGLN Q GK IRVFKNLRVC DCHEFIKGLSKI
Sbjct: 604 HDIDDESKEENLRAHSEKLAIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIKGLSKI 662
Query: 668 LKLVFVVRDATRFHRFEGGVCSCGDYW 694
K+ +VVRDA RFH FE G CSCGDYW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/665 (38%), Positives = 401/665 (60%), Gaps = 8/665 (1%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G QLHG ++K GF + N L+ Y K ++ A VFD+M ER+V+SW +++ G++
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
NG A+ LS+F QM S ++ + T+ + + G +H + +K+ F
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
N+++DMYSKCG ++ A +F M +S++++ +MIAGY G + + + LF +M+E G
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
PD +T T+ L C + G ++H ++ + + + ++ +L+D Y KCG + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEA 451
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFAD 329
VF + K +ISW+++I GY++ EA+ LF L E+ D ++ ++ A
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
+ ++G++IH Y + D V+NS+VDMY KCG + A LF+++ K++V+WTV+
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
I GYG HG KEA+ LF +M +E D ++++++L ACSHSGLV+E +F+ + ++ +
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631
Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
++P +EHY+CIVD L R G L +A IE+MP+ P IW LL CR+H D++L +V
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 691
Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
E + L+ +N YV+M+NI+A+A W + +RLRK +GL+K G SW+E+ ++ F
Sbjct: 692 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751
Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
GD ++P TE I L ++ RM EE G+ KYAL D +E KEE+L HSEKLA+
Sbjct: 752 VAGDSSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
L ++ G GK+IRV KNLRVCGDCHE K +SK+ + V+RD+ RFH+F+ G CS
Sbjct: 811 LGIISSG----HGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCS 866
Query: 690 CGDYW 694
C +W
Sbjct: 867 CRGFW 871
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 257/489 (52%), Gaps = 5/489 (1%)
Query: 13 QRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDK 72
+ L L+ C+ + L G ++ + GF D L + L MY CG++ A VFD+
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 73 MLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
+ + W LM ++G+ + LF +M SS V+ + +T S K+ L SV G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
Q+HG +KSGF VGNS++ Y K R++ A ++FD M + +I+WN++I GYV
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
G ++KGL +F +M G D T S C + G +H + + F S +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF--SREDR 332
Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
+L+D Y KCG L A+ VF + +SV+S++S+I GYA+E EA++LF ++ E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
+ D + +++++ A + L+++GK++H + + G D VSN+++DMY KCG + EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLSACSHS 431
+F+EM VK++++W II GY K+ A EA+ LF +L + PD VL AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
++ +E + + R S +VD + G L A L + + K ++ W
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLAHMLFDDIASKDLVS-WTV 570
Query: 492 LLSACRVHG 500
+++ +HG
Sbjct: 571 MIAGYGMHG 579
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 220/420 (52%), Gaps = 6/420 (1%)
Query: 74 LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
+R+V + F ++GN + + L C G + P TL + ++ S+++G
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114
Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
++ +GF + +G+ + MY+ CG + EA+R+FD + + + WN ++ +G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
+ LF+KM G D +TF+ K+ SL SV GG Q+HGF++ SGF + +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF--GERNSV 232
Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
SLV FY+K + AR+VFD + ++ VISW+S+I GY + + +F Q+ +
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
++D + S+ AD L+ G+ +H+ K + N+++DMY KCG +D A
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
+F EM ++VV++T +I GY + GLA EAV LF +M + + PD AVL+ C+ L
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
++E + + + + I + ++D + G + EA+ + M VK I+ W T++
Sbjct: 413 LDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTII 470
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 11/193 (5%)
Query: 6 FSLVSERQRLADSLR-------CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA 58
F+L+ E +R + R C+ D G ++HG +++ G+ D + N L+DMYA
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 59 KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLST 118
KCG + A +FD + +++VSWT ++ G+ +G K ++LF QM + ++ +E + +
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 119 NIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPA 176
+ A V+ G + + M+ + P V + I+DM ++ G + +A R + MP
Sbjct: 606 LLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 664
Query: 177 KSLIT-WNAMIAG 188
T W A++ G
Sbjct: 665 PPDATIWGALLCG 677
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/688 (37%), Positives = 384/688 (55%), Gaps = 9/688 (1%)
Query: 8 LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGAC 67
L + LA + CS + L G QLH K+GF+ + + L+++YAKC ++ A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 68 AVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLS 127
F + NVV W ++ + + + +F QM + PN++T + +K L
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
+E G QIH +K+ F+ N V + +IDMY+K G+++ A + K +++W MIA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
GY + DK L FR+M + G DE T+ + AC L ++ G QIH SGF
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-- 622
Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
S +LV Y +CG + E+ F+ E I+W++L+ G+ Q N EA+ +F +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
+ + + F S + ++ A ++QGKQ+HA K +T V N+++ MY KCG
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
I +A + F E+ KN V+W II Y KHG EA+ F +M+ +V P+ V + VLSA
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
CSH GLV++ YF + ++ + P+ EHY C+VD L RAG L AK I+ MP+KP
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 488 IWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLAR 547
+W+TLLSAC VH ++E+G LL L+ ++ YV++SN++A + W+ + R+ +
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922
Query: 548 SKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL 607
KG+KK G+SW+EV IH FY GD HPL ++IH+ ++ KR E+G+V L
Sbjct: 923 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR-ASEIGYVQDCFSLL 981
Query: 608 HDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSK 666
+++Q E K+ + +HSEKLAI GL P V I V KNLRVC DCH +IK +SK
Sbjct: 982 NELQHEQKDPIIFIHSEKLAISF-----GLLSLPATVPINVMKNLRVCNDCHAWIKFVSK 1036
Query: 667 ILKLVFVVRDATRFHRFEGGVCSCGDYW 694
+ +VRDA RFH FEGG CSC DYW
Sbjct: 1037 VSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 246/483 (50%), Gaps = 21/483 (4%)
Query: 21 CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
C N LD G +LH ++K+G + L+ L D Y G++ GA VFD+M ER + +
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 81 WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM------- 133
W ++ LF +M S +V PNE T SGVL + G
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF------SGVLEACRGGSVAFDVVE 207
Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
QIH + G + VV N +ID+YS+ G ++ A R+FD + K +W AMI+G
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
+ + LF M G +P + F+S L AC + S+ G Q+HG ++ GF S T +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYV 325
Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
+LV Y G L+ A +F + Q+ +++++LI G +Q +AMELF+++ L
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
+ D L+S++ + + +G+Q+HAY K+ + + +++++Y KC I+ A +
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
F E V+NVV W V++ YG + + +FR+M ++++ P+ Y ++L C G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSC--IVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
+E ++ S++ + ++ Y C ++D + G+LD A +++ K ++ W T
Sbjct: 506 LELGEQIHSQII---KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTT 561
Query: 492 LLS 494
+++
Sbjct: 562 MIA 564
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 257/519 (49%), Gaps = 9/519 (1%)
Query: 21 CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
C ++ D Q+H ++ G ++ N LID+Y++ G ++ A VFD + ++ S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 81 WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
W A++ G +N + LFC M + P + S+ + A + S+E G Q+HG+ +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
K GF + V N+++ +Y G + A +F M + +T+N +I G GY +K +
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
LF++M G PD T S + AC + G++ G Q+H + GF + K I G+L++
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK--IEGALLNL 433
Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVL 320
Y KC + A F E ++V+ W+ +++ Y ++L + +FRQ++ + + +
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 321 SSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV 380
S++ +E G+QIH+ K L+ V + ++DMY K G +D A ++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
K+VV+WT +I GY ++ +A+ FR+ML + D V +SAC+ ++E Q+
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
++ C + + +V R G+++E+ E +IA W L+S + G
Sbjct: 614 HAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSG 671
Query: 501 DLELGREVGEILLRL--DGDNPVNYVMMSNIHADAGSWN 537
+ E E + +R+ +G + N+ S + A + + N
Sbjct: 672 NNE---EALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 240/482 (49%), Gaps = 4/482 (0%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L C K L+ G QLHG ++K+GFS D + N L+ +Y G + A +F M +R+
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
V++ L+ G Q G + + LF +M ++P+ TL++ + A ++ G Q+H
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
K GF N + +++++Y+KC I A F ++++ WN M+ Y L
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+FR+MQ +P+++T+ S LK C LG + G QIH +I + F + + L+
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVCSVLI 532
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
D Y K G L A + K V+SW+++I GY Q +A+ FRQ+ +R ++ D
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
L++ + A +++G+QIHA A D N++V +Y +CG I+E+ F +
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
+ + W +++G+ + G +EA+ +F +M + ++ + + + + A S + +++ +
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
+ + + E + ++ + G + +A+ + K ++ W +++A
Sbjct: 713 QVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSK 770
Query: 499 HG 500
HG
Sbjct: 771 HG 772
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/671 (38%), Positives = 397/671 (59%), Gaps = 15/671 (2%)
Query: 28 LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
L G Q+H +K+G L ++N LI+MY K + A VFD M ER+++SW +++ G
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM----QIHGMCMKSG 143
QNG + LF Q+ +KP+++T+++ +KA+ SS+ G+ Q+H +K
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA---SSLPEGLSLSKQVHVHAIKIN 447
Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
+ V ++ID YS+ + EA +F+ L+ WNAM+AGY + K L LF
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
M + GE D+FT + K CG L ++ G Q+H + I SG Y + ++ ++D YVK
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG--YDLDLWVSSGILDMYVK 564
Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSM 323
CG + A+ FD I ++W+++I G + A +F Q+R + D F ++++
Sbjct: 565 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 624
Query: 324 MGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNV 383
+ +EQG+QIHA A K+ D V S+VDMY KCG ID+A LF + + N+
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684
Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
W ++ G +HG KE + LF++M ++PD V ++ VLSACSHSGLV E+ ++
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRS 744
Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
+ D +KP IEHYSC+ D+LGRAG + +A+NLIESM ++ S ++++TLL+ACRV GD E
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTE 804
Query: 504 LGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVD 563
G+ V LL L+ + YV++SN++A A W+E + R + + +KK G SW+EV
Sbjct: 805 TGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVK 864
Query: 564 KEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHS 623
+IH F D ++ TE I++ + +M + +K+E G+V + L D++EE KE +L HS
Sbjct: 865 NKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE-GYVPETDFTLVDVEEEEKERALYYHS 923
Query: 624 EKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRF 683
EKLA+ L L+ P IRV KNLRVCGDCH +K ++K+ V+RDA RFHRF
Sbjct: 924 EKLAVAFGL----LSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979
Query: 684 EGGVCSCGDYW 694
+ G+CSCGDYW
Sbjct: 980 KDGICSCGDYW 990
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 239/486 (49%), Gaps = 32/486 (6%)
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
+L +G A L F M S V+ ++ T + + + S+ G Q+H M +K G +
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
V NS+I+MY K + A +FD M + LI+WN++IAG G + + LF ++
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 208 HGEIPDEFTFTSTLKACGSLG---SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
G PD++T TS LKA SL S+ +H I + + ++ +L+D Y +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN----VSDSFVSTALIDAYSRN 465
Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
C+ EA +F+ +++W++++ GY Q + + ++LF + ++ + D F L+++
Sbjct: 466 RCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
+ QGKQ+HAYA K LD VS+ I+DMY+KCG + A F+ +PV + V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD--GVAYLAVLSACSHSGLVEESQEYFS 442
WT +I+G ++G + A +F +M L V PD +A LA S+C + L + Q + +
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL-TALEQGRQIHAN 643
Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD- 501
L + P + + +VD + G +D+A L + + + +I W +L HG+
Sbjct: 644 ALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEG 700
Query: 502 ---LELGREVGEILLRLDGDNPVN--------------YVMMSNIHADAGSWNECERLRK 544
L+L +++ + ++ D + Y M ++H D G E E
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 545 LARSKG 550
LA + G
Sbjct: 761 LADALG 766
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 123/217 (56%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
LA + C ++ G Q+H +K G+ DL +++ ++DMY KCG+M+ A FD +
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
+ V+WT ++ G ++NG + +F QM V P+EFT++T KAS L+++E G Q
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
IH +K +P VG S++DMY+KCG I++A +F + ++ WNAM+ G G
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
+ L LF++M+ G PD+ TF L AC G V
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 47/415 (11%)
Query: 23 SKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWT 82
S +L+L G H ++ + + L N+LI MY+KCG + A VFDKM +R++VSW
Sbjct: 52 SSDLML--GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN 109
Query: 83 ALMCGFLQNG-----NAKACLSLFCQMGSSSVKPNEFTLSTNIK---ASGVLSSVENGMQ 134
+++ + Q+ N + LF + V + TLS +K SG + + E+
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES--- 166
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
HG K G + + V +++++Y K G++ E +F+ MP + ++ WN M+ Y+ G+
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
++ + L G P+E T + G G VK+
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAG----------------QVKSFAN 270
Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
G+ +A V ++I + +S Y + ++ F + E ++
Sbjct: 271 GN------------DASSVSEIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVE 312
Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATEL 374
D M+ + G+Q+H A K+ L +VSNS+++MY K A +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
F+ M +++++W +I G ++GL EAV LF ++L ++PD +VL A S
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 217/519 (41%), Gaps = 39/519 (7%)
Query: 10 SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
+ R L+ L+ C + + HG K+G D + L+++Y K G++ +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 70 FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
F++M R+VV W ++ +L+ G + + L SS + PNE TL + SG S
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDA 262
Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
G++ A D +I N ++ Y
Sbjct: 263 --------------------------------GQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
+ +G L F M E D+ TF L + S+ G Q+H + G +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL--DL 348
Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
++ SL++ Y K AR VFD + ++ +ISW+S+I G AQ EA+ LF QL
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 310 ERSLQVDGFVLSSMMGVFADFAL-VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
L+ D + ++S++ + + KQ+H +A K+ + D+ VS +++D Y + +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
EA LF E ++V W ++ GY + + + LF M D V C
Sbjct: 469 KEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 429 SHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAI 488
+ + ++ + + S I+D + G + A+ +S+PV +A
Sbjct: 528 GFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA- 585
Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMS 527
W T++S C +G+ E V +RL G P + + +
Sbjct: 586 WTTMISGCIENGEEERAFHVFS-QMRLMGVLPDEFTIAT 623
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 43/257 (16%)
Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
GK HA + + N+++ MY KCG + A +F++MP +++V+W I+ Y +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 396 HGLA-----KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN---- 446
++A LFR + D V + +L C HSG V S+ + C
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 447 -DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
D+ + +V+ + G++ E K L E MP + + +W +L A LE+G
Sbjct: 178 GDEFVA------GALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAY-----LEMG 225
Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
+ I L S H+ + NE LR LAR G AG +
Sbjct: 226 FKEEAIDLS------------SAFHSSGLNPNEIT-LRLLARISGDDSDAG--------Q 264
Query: 566 IHFFYGGDDTHPLTEKI 582
+ F G+D ++E I
Sbjct: 265 VKSFANGNDASSVSEII 281
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/738 (36%), Positives = 406/738 (55%), Gaps = 55/738 (7%)
Query: 5 SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
S S + + C + + G H + GF ++ + N L+ MY++C ++
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 65 GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS-SVKPNEFTLSTNIKAS 123
A VFD+M +VVSW +++ + + G K L +F +M + +P+ TL +
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
L + G Q+H + S N VGN ++DMY+KCG ++EA +F M K +++WN
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEH----------------------------------- 208
AM+AGY G + + LF KMQE
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK-------TVIAGSLVDFY 261
G P+E T S L C S+G++ G +IH + I +P ++ ++ L+D Y
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDENMVINQLIDMY 417
Query: 262 VKCGCLVEARRVFDLI--EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV--DG 317
KC + AR +FD + +++ V++W+ +I GY+Q + +A+EL ++ E Q +
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAK-VPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
F +S + A A + GKQIHAYA + + + VSN ++DMY KCG I +A +F+
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
M KN VTWT ++TGYG HG +EA+G+F +M + DGV L VL ACSHSG++++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
EYF+R+ + P EHY+C+VD LGRAGRL+ A LIE MP++P +W LS C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
R+HG +ELG E + L ++ +Y ++SN++A+AG W + R+R L R KG+KK G
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
SWVE K F+ GD THP ++I+QVL++ +R+K ++G+V +ALHD+ +E K+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK-DIGYVPETGFALHDVDDEEKD 776
Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
+ L HSEK LAL G L G IR+ KNLRVCGDCH +S+I+ ++RD
Sbjct: 777 DLLFEHSEK----LALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRD 832
Query: 677 ATRFHRFEGGVCSCGDYW 694
++RFH F+ G CSC YW
Sbjct: 833 SSRFHHFKNGSCSCKGYW 850
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 260/538 (48%), Gaps = 59/538 (10%)
Query: 34 LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN--VVSWTALMCGFLQN 91
+H L+ G L L + LI Y G ++ A ++ + + V W +L+ + N
Sbjct: 47 IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 92 GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
G A CL LF M S S P+ +T KA G +SSV G H + + +GF N VG
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM-QEHGE 210
N+++ MYS+C +++A ++FD M +++WN++I Y G L +F +M E G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
PD T + L C SLG+ G Q+H F +TS ++ + G+ LVD Y KCG + E
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM---IQNMFVGNCLVDMYAKCGMMDE 282
Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
A VF + K V+SW++++ GY+Q +A+ LF +++E +++D S+ + +A
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 330 FAL-----------------------------------VEQGKQIHAYAAKVP------- 347
L + GK+IH YA K P
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK--NVVTWTVIITGYGKHGLAKEAVGL 405
G + V N ++DMY KC +D A +F+ + K +VVTWTV+I GY +HG A +A+ L
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Query: 406 FRKMLLDDVE--PDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDS 463
+M +D + P+ L AC+ + ++ + +++ + +C++D
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDM 522
Query: 464 LGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELGREVGEILLRLDG 517
+ G + +A+ + ++M K + W +L++ +HG L + E+ I +LDG
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDG 579
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 388/676 (57%), Gaps = 8/676 (1%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ C L G ++HG LVK GFS DL L +MYAKC ++N A VFD+M ER++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
VSW ++ G+ QNG A+ L + M ++KP+ T+ + + A L + G +IHG
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
M+SGF+ + +++DMY+KCG + A ++FD M +++++WN+MI YV +
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+L+F+KM + G P + + L AC LG + G IH + G +V V SL+
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV--NSLI 379
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
Y KC + A +F ++ ++++SW+++ILG+AQ +A+ F Q+R R+++ D F
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
S++ A+ ++ K IH + + V+ ++VDMY KCG I A +F+ M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
++V TW +I GYG HG K A+ LF +M ++P+GV +L+V+SACSHSGLVE
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
+ F + + ++ ++HY +VD LGRAGRL+EA + I MPVKP++ ++ +L AC++
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
H ++ + E L L+ D+ +V+++NI+ A W + ++R +GL+K G S
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
VE+ E+H F+ G HP ++KI+ L ++ +KE G+V L ++ + KE+
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA-GYVPDTNLVL-GVENDVKEQL 737
Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
L HSEKLAI L LN G I V KNLRVC DCH K +S + VVRD
Sbjct: 738 LSTHSEKLAISFGL----LNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQ 793
Query: 679 RFHRFEGGVCSCGDYW 694
RFH F+ G CSCGDYW
Sbjct: 794 RFHHFKNGACSCGDYW 809
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 252/492 (51%), Gaps = 14/492 (2%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
Q+ + K G + L+ ++ + G ++ A VF+ + + V + ++ GF +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
+ L F +M V+P + + +K G + + G +IHG+ +KSGF +
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174
Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
+ +MY+KC ++NEA ++FD MP + L++WN ++AGY G + L + + M E P
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
T S L A +L + G +IHG+ + SGF V I+ +LVD Y KCG L AR+
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQ 292
Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
+FD + +++V+SW+S+I Y Q EN EAM +F+++ + ++ + + AD
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
+E+G+ IH + ++ + SV NS++ MY KC +D A +F ++ + +V+W +I G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS---RLCNDKR 449
+ ++G +A+ F +M V+PD Y++V++A + + ++ R C DK
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK- 471
Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG----DLELG 505
+ + +VD + G + A+ LI M + + W ++ HG LEL
Sbjct: 472 ---NVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527
Query: 506 REVGEILLRLDG 517
E+ + ++ +G
Sbjct: 528 EEMQKGTIKPNG 539
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 176/314 (56%), Gaps = 6/314 (1%)
Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMI 186
SS++ QI + K+G ++ ++ + G ++EAAR+F+ + +K + ++ M+
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 187 AGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
G+ DK L F +M+ P + FT LK CG + G +IHG L+ SGF
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF- 166
Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
S+ L + Y KC + EAR+VFD + ++ ++SW++++ GY+Q A+E+ +
Sbjct: 167 -SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 307 QLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLK 364
+ E +L+ + S++ + L+ GK+IH YA + SG D+ ++S ++VDMY K
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR--SGFDSLVNISTALVDMYAK 283
Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
CG ++ A +LF+ M +NVV+W +I Y ++ KEA+ +F+KML + V+P V+ +
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 425 LSACSHSGLVEESQ 438
L AC+ G +E +
Sbjct: 344 LHACADLGDLERGR 357
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 4/265 (1%)
Query: 18 SLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERN 77
+L C+ L+ G +H V++G ++ + N LI MY KC E++ A ++F K+ R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 78 VVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
+VSW A++ GF QNG L+ F QM S +VKP+ FT + I A LS + IHG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
+ M+S + N V +++DMY+KCG I A +FD+M + + TWNAMI GY G+
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
L LF +MQ+ P+ TF S + AC G V G + +++ + + G++
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAM 581
Query: 258 VDFYVKCGCLVEARRVFDLIEQKSV 282
VD + G L EA +D I Q V
Sbjct: 582 VDLLGRAGRLNEA---WDFIMQMPV 603
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/673 (36%), Positives = 397/673 (58%), Gaps = 12/673 (1%)
Query: 28 LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
L G ++HG ++ G F + + N L++MYAKCG + A VF M +++ VSW +++
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 87 GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
G QNG + + M + P FTL +++ + L + G QIHG +K G +
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS-DKGLLLFRKM 205
N V N+++ +Y++ G +NE ++F MP ++WN++I + S + ++ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
Q G+ + TF+S L A SL G QIHG + + T +L+ Y KCG
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT--ENALIACYGKCG 566
Query: 266 CLVEARRVFD-LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
+ ++F + E++ ++W+S+I GY E LA+A++L + + ++D F+ ++++
Sbjct: 567 EMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
FA A +E+G ++HA + + D V +++VDMY KCG +D A FN MPV+N
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSR 443
+W +I+GY +HG +EA+ LF M LD PD V ++ VLSACSH+GL+EE ++F
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 444 LCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHG-D 501
+ + + PRIEH+SC+ D LGRAG LD+ ++ IE MP+KP++ IW+T+L A CR +G
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806
Query: 502 LELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVE 561
ELG++ E+L +L+ +N VNYV++ N++A G W + + RK + +KK AG SWV
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Query: 562 VDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV 621
+ +H F GD +HP + I++ L E+ ++M++ G+V +AL+D+++E+KEE L
Sbjct: 867 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDA-GYVPQTGFALYDLEQENKEEILSY 925
Query: 622 HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFH 681
HSEKLA+ L + P IR+ KNLRVCGDCH K +SKI ++RD+ RFH
Sbjct: 926 HSEKLAVAFVLAAQRSSTLP---IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 682 RFEGGVCSCGDYW 694
F+ G CSC D+W
Sbjct: 983 HFQDGACSCSDFW 995
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 250/502 (49%), Gaps = 18/502 (3%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
Q+ + K G DL + + L+ +AK G ++ A VF++M RN V+ LM G ++
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 93 NAKACLSLFCQMGSS-SVKPNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGF-EWN 147
+ LF M S V P + + + L+ ++ G ++HG + +G ++
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
+GN +++MY+KCG I +A R+F M K ++WN+MI G G + + ++ M+
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
H +P FT S+L +C SL G QIHG + G +V ++ +L+ Y + G L
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS--VSNALMTLYAETGYL 466
Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQ-EENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
E R++F + + +SW+S+I A+ E +L EA+ F + +++ SS++
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP-VKNVVT 385
+ + E GKQIH A K + + N+++ Y KCG +D ++F+ M ++ VT
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS--- 442
W +I+GY + L +A+ L ML D Y VLSA + +E E +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
R C ++ + S +VD + GRLD A +MPV+ S + W +++S HG
Sbjct: 647 RAC----LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQG 701
Query: 503 ELGREVGEILLRLDGDNPVNYV 524
E ++ E ++LDG P ++V
Sbjct: 702 EEALKLFET-MKLDGQTPPDHV 722
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 234/480 (48%), Gaps = 30/480 (6%)
Query: 34 LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
H L K D+ L N+LI+ Y + G+ A VFD+M RN VSW ++ G+ +NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 94 AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE--NGMQIHGMCMKSGFEWNPVVG 151
K L M + N++ + ++A + SV G QIHG+ K + + VV
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 152 NSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
N +I MY KC G + A F + K+ ++WN++I+ Y AG +F MQ G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 211 IPDEFTFTSTLKACGSLG--SVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
P E+TF S + SL V QI + SG + + LV + K G L
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL--FVGSGLVSAFAKSGSLS 260
Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-SLQVDGFVLSSMMGVF 327
AR+VF+ +E ++ ++ + L++G +++ EA +LF + + + +V+ ++ F
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSF 318
Query: 328 ADFALVEQ-----GKQIHAYAAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMP 379
+++L E+ G+++H + + +GL + N +V+MY KCG I +A +F M
Sbjct: 319 PEYSLAEEVGLKKGREVHGHV--ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
K+ V+W +ITG ++G EAV ++ M D+ P ++ LS+C+ + Q+
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
+ + +K I+ + ++L G L+E + + SMP ++ W +++ A
Sbjct: 437 -----IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 200/392 (51%), Gaps = 10/392 (2%)
Query: 8 LVSERQRLADSLRCCSK--NLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC-GEMN 64
+ S + LR C + ++ + +G Q+HG + K+ ++ D +++N LI MY KC G +
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 65 GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
A F + +N VSW +++ + Q G+ ++ +F M +P E+T + + +
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 125 VLSSVENGMQIHGMC--MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
L+ + + MC KSG + VG+ ++ ++K G ++ A ++F+ M ++ +T
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGG---GTQIHG 238
N ++ G V + ++ LF M ++ P+ + + SL G G ++HG
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
+IT+G I LV+ Y KCG + +ARRVF + K +SW+S+I G Q
Sbjct: 338 HVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSI 358
EA+E ++ +R + F L S + A + G+QIH + K+ L+ SVSN++
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 359 VDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
+ +Y + G ++E ++F+ MP + V+W II
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 205/428 (47%), Gaps = 18/428 (4%)
Query: 5 SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
SF+L+S SL C+ G Q+HG +K+G ++ ++N L+ +YA+ G +N
Sbjct: 415 SFTLIS-------SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 65 GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKA 122
+F M E + VSW +++ G L ++ C + + K N T S+ + A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSII-GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA-KSLIT 181
LS E G QIHG+ +K+ N++I Y KCG ++ ++F M + +T
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
WN+MI+GY+ K L L M + G+ D F + + L A S+ ++ G ++H +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEA 301
+ V V+ +LVD Y KCG L A R F+ + ++ SW+S+I GYA+ EA
Sbjct: 647 RACLESDV--VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 302 MELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
++LF ++ + D ++ + L+E+G + H + GL + + +
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCM 763
Query: 359 VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
D+ + G +D+ + +MP+K NV+ W ++ + K +G +L +EP+
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE 823
Query: 418 GVAYLAVL 425
+L
Sbjct: 824 NAVNYVLL 831
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 179/380 (47%), Gaps = 22/380 (5%)
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
H K+ + + + N++I+ Y + G A ++FD MP ++ ++W +++GY G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG--GGTQIHGFLITSGFPYSVKTV 252
+ L+ R M + G +++ F S L+AC +GSVG G QIHG + Y+V V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK--LSYAVDAV 140
Query: 253 IAGSLVDFYVKC-GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
++ L+ Y KC G + A F IE K+ +SW+S+I Y+Q + A +F ++
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 312 SLQVDGFVLSSMMGVF-----ADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCG 366
+ + S++ D L+E QI K D V + +V + K G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 367 LIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKM-LLDDVEPDGVAYLAVL 425
+ A ++FN+M +N VT ++ G + +EA LF M + DV P+ +Y+ +L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILL 315
Query: 426 SACSHSGLVEE-----SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
S+ L EE +E + + + + +V+ + G + +A+ + M
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 481 PVKPSIAIWQTLLSACRVHG 500
K S++ W ++++ +G
Sbjct: 376 TDKDSVS-WNSMITGLDQNG 394
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/682 (36%), Positives = 400/682 (58%), Gaps = 10/682 (1%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
+ +L C G ++H +++K S +L + N LI MY +CG+M A + +M
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Query: 74 LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
+VV+W +L+ G++QN K L F M ++ K +E ++++ I ASG LS++ GM
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406
Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
++H +K G++ N VGN++IDMYSKC R F M K LI+W +IAGY
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
+ L LFR + + DE S L+A L S+ +IH ++ G + TVI
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVI 523
Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
LVD Y KC + A RVF+ I+ K V+SW+S+I A N +EA+ELFR++ E L
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 314 QVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATE 373
D L ++ A + + +G++IH Y + L+ S++ ++VDMY CG + A
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 374 LFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
+F+ + K ++ +T +I YG HG K AV LF KM ++V PD +++LA+L ACSH+GL
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703
Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
++E + + + ++ ++P EHY C+VD LGRA + EA ++ M +P+ +W LL
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 763
Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKK 553
+ACR H + E+G + LL L+ NP N V++SN+ A+ G WN+ E++R ++ G++K
Sbjct: 764 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEK 823
Query: 554 VAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEE 613
G SW+E+D ++H F D +HP +++I++ L E+ ++++ E+G+V K+ LH++ E
Sbjct: 824 HPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEG 883
Query: 614 SKEESLRVHSEKLAIGLALVRGGLNEQPGKV-IRVFKNLRVCGDCHEFIKGLSKILKLVF 672
K + L HSE++AI L+R P + +R+ KNLRVC DCH F K +SK+ +
Sbjct: 884 EKVQMLHGHSERIAIAYGLLR-----TPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDI 938
Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
V+RDA RFH FE G+CSCGD W
Sbjct: 939 VMRDANRFHHFESGLCSCGDSW 960
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 250/513 (48%), Gaps = 10/513 (1%)
Query: 10 SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDL-MLNNDLIDMYAKCGEMNGACA 68
S + A L C K + G QLH + K SF+L L L+ MY KCG ++ A
Sbjct: 78 SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137
Query: 69 VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
VFD+M +R +W ++ ++ NG + L+L+ M V + +KA L
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197
Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIA 187
+ +G ++H + +K G+ + N+++ MY+K ++ A R+FD K + WN++++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
Y +G S + L LFR+M G P+ +T S L AC G +IH ++ S +
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-TH 316
Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
S + + +L+ Y +CG + +A R+ + V++W+SLI GY Q EA+E F
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
+ + D ++S++ + + G ++HAY K + V N+++DMY KC L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
F M K++++WT +I GY ++ EA+ LFR + +E D + ++L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
S + +E + + I++ +VD G+ + A + ES+ K ++
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 488 IWQTLLSACRVHGD----LELGREVGEILLRLD 516
W +++S+ ++G+ +EL R + E L D
Sbjct: 555 -WTSMISSSALNGNESEAVELFRRMVETGLSAD 586
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/690 (36%), Positives = 397/690 (57%), Gaps = 26/690 (3%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGE--MNGACAVFDKMLE 75
+R CS + + G G L+K G F D+ + LIDM+ K GE A VFDKM E
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSE 231
Query: 76 RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
NVV+WT ++ +Q G + + F M S + ++FTLS+ A L ++ G Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKC---GRINEAARMFDVMPAKSLITWNAMIAGYVL- 191
H ++SG + V S++DMY+KC G +++ ++FD M S+++W A+I GY+
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 192 AGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
+ + + LF +M G + P+ FTF+S KACG+L G Q+ G G +
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL--ASN 407
Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
+ +A S++ +VK + +A+R F+ + +K+++S+++ + G + N +A +L ++ E
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
R L V F +S++ A+ + +G+QIH+ K+ + V N+++ MY KCG ID
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
A+ +FN M +NV++WT +ITG+ KHG A + F +M+ + V+P+ V Y+A+LSACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
GLV E +F+ + D ++KP++EHY+C+VD L RAG L +A I +MP + + +W+
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
T L ACRVH + ELG+ +L LD + P Y+ +SNI+A AG W E +R+ + +
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKE--ELGFVYGVKYALH 608
L K G SW+EV +IH FY GD HP HQ+ E+++ + E G+V LH
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHP---NAHQIYDELDRLITEIKRCGYVPDTDLVLH 764
Query: 609 DIQEESKEES----LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGL 664
++EE+ E L HSEK+A+ L+ + + +RVFKNLRVCGDCH +K +
Sbjct: 765 KLEEENDEAEKERLLYQHSEKIAVAFGLI----STSKSRPVRVFKNLRVCGDCHNAMKYI 820
Query: 665 SKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
S + V+RD RFH F+ G CSC DYW
Sbjct: 821 STVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 243/498 (48%), Gaps = 28/498 (5%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML---E 75
L+ C + G +H L++ D +L N LI +Y+K G+ A VF+ M +
Sbjct: 69 LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128
Query: 76 RNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI 135
R+VVSW+A+M + NG + +F + + PN++ + I+A V G
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 136 HGMCMKSG-FEWNPVVGNSIIDMYSKC-GRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
G MK+G FE + VG S+IDM+ K A ++FD M +++TW MI + G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
+ + + F M G D+FT +S AC L ++ G Q+H + I SG V+
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC-- 306
Query: 254 AGSLVDFYVKC---GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA-EAMELFRQL- 308
SLVD Y KC G + + R+VFD +E SV+SW++LI GY + NLA EA+ LF ++
Sbjct: 307 --SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
+ ++ + F SS + + GKQ+ A K ++SV+NS++ M++K +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 369 DEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC 428
++A F + KN+V++ + G ++ ++A L ++ ++ + ++LS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 429 SHSGLVEESQEYFSRL------CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV 482
++ G + + ++ S++ CN I YS + G +D A + M
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS-------KCGSIDTASRVFNFMEN 537
Query: 483 KPSIAIWQTLLSACRVHG 500
+ I+ W ++++ HG
Sbjct: 538 RNVIS-WTSMITGFAKHG 554
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 232/478 (48%), Gaps = 14/478 (2%)
Query: 84 LMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHGMCMKS 142
L+ L G+ + +S M ++P + T S+ +K+ G +H ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 143 GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP---AKSLITWNAMIAGYVLAGYSDKGL 199
E + V+ NS+I +YSK G +A +F+ M + +++W+AM+A Y G +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
+F + E G +P+++ +T+ ++AC + VG G GFL+ +G + + SL+D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH-FESDVCVGCSLID 210
Query: 260 FYVKCGCLVE-ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
+VK E A +VFD + + +V++W+ +I Q EA+ F + + D F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC---GLIDEATELF 375
LSS+ A+ + GKQ+H++A + SGL V S+VDMY KC G +D+ ++F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWA--IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 376 NEMPVKNVVTWTVIITGYGKH-GLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGL 433
+ M +V++WT +ITGY K+ LA EA+ LF +M+ VEP+ + + AC +
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 434 VEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLL 493
++ + + + + ++ ++ R+++A+ ES+ K ++ L
Sbjct: 389 PRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 494 SACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
CR + + + EI R G + + + + A+ GS + E++ GL
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/667 (36%), Positives = 379/667 (56%), Gaps = 14/667 (2%)
Query: 33 QLHGALVKMGFSFD--LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
Q+H VK+GF + L ++N L+ Y + ++ AC +F+++ E++ V++ L+ G+ +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
+G + LF +M S +P++FT S +KA L G Q+H + + +GF + V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
GN I+D YSK R+ E +FD MP +++N +I+ Y A + L FR+MQ G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIH--GFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
F F + L +L S+ G Q+H L T+ V SLVD Y KC
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV----GNSLVDMYAKCEMFE 403
Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFA 328
EA +F + Q++ +SW++LI GY Q+ ++LF ++R +L+ D ++++ A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTV 388
FA + GKQ+HA+ + + + + +VDMY KCG I +A ++F EMP +N V+W
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 389 IITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
+I+ + +G + A+G F KM+ ++PD V+ L VL+ACSH G VE+ EYF +
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
+ P+ +HY+C++D LGR GR EA+ L++ MP +P +W ++L+ACR+H + L
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 509 GEILLRLDG-DNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH 567
E L ++ + YV MSNI+A AG W + ++K R +G+KKV SWVEV+ +IH
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703
Query: 568 FFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLA 627
F D THP ++I + + E+ ++ E G+ + D+ E+ K ESL+ HSE+LA
Sbjct: 704 VFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDTSSVVQDVDEQMKIESLKYHSERLA 762
Query: 628 IGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGV 687
+ AL+ + G I V KNLR C DCH IK +SKI+K VRD +RFH F GV
Sbjct: 763 VAFALI----STPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGV 818
Query: 688 CSCGDYW 694
CSCGDYW
Sbjct: 819 CSCGDYW 825
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 232/458 (50%), Gaps = 8/458 (1%)
Query: 50 NNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSS 107
N +I + K G+++ A +FD M +R VV+WT LM + +N + LF QM SS
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNP--VVGNSIIDMYSKCGRIN 165
P+ T +T + Q+H +K GF+ NP V N ++ Y + R++
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
A +F+ +P K +T+N +I GY G + + LF KM++ G P +FTF+ LKA
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
L G Q+H +T+GF S + ++DFY K ++E R +FD + + +S+
Sbjct: 262 GLHDFALGQQLHALSVTTGF--SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
+ +I Y+Q + ++ FR+++ F ++M+ + A+ + ++ G+Q+H A
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
+ V NS+VDMY KC + +EA +F +P + V+WT +I+GY + GL + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
F KM ++ D + VL A + + ++ + + ++ + S +VD
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYA 498
Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
+ G + +A + E MP + +++ W L+SA +GD E
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGE 535
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 211/414 (50%), Gaps = 10/414 (2%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G QLH V GFS D + N ++D Y+K + +FD+M E + VS+ ++ + Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
+A L F +M F +T + + LSS++ G Q+H + + + V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
GNS++DMY+KC EA +F +P ++ ++W A+I+GYV G GL LF KM+
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-LVDFYVKCGCLVE 269
D+ TF + LKA S S+ G Q+H F+I SG +++ V +GS LVD Y KCG + +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSG---NLENVFSGSGLVDMYAKCGSIKD 505
Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
A +VF+ + ++ +SW++LI +A + A+ F ++ E LQ D + ++ +
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 330 FALVEQGKQIHAYAAKVP-SGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVT 385
VEQG + + A P G+ + ++D+ + G EA +L +EMP + + +
Sbjct: 566 CGFVEQGTEY--FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
W+ ++ H A K+ + D AY+++ + + +G E+ ++
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 14/355 (3%)
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
N V N++I + K G ++ A +FD MP ++++TW ++ Y + D+ LFR+M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 207 EHGE--IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
+PD TFT+ L C Q+H F + GF + ++ L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
L A +F+ I +K +++++LI GY ++ E++ LF ++R+ Q F S ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 325 GV---FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
DFAL G+Q+HA + D SV N I+D Y K + E LF+EMP
Sbjct: 258 KAVVGLHDFAL---GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS-ACSHSGLVEESQEY 440
+ V++ V+I+ Y + + ++ FR+M + + +LS A + S L Q +
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 441 FSRLCNDKRMKPRIEHY-SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
L I H + +VD + +EA+ + +S+P + +++ W L+S
Sbjct: 375 CQALLA---TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALIS 425
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 7 SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
+L +++ A L+ + L G QLH +++ G ++ + L+DMYAKCG + A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 67 CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
VF++M +RN VSW AL+ NG+ +A + F +M S ++P+ ++ + A
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 127 SSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNA 184
VE G + M G ++D+ + GR EA ++ D MP I W++
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626
Query: 185 MI 186
++
Sbjct: 627 VL 628
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK-------------- 280
++ +I +GF T + +V+ ++ G + AR+V+D + K
Sbjct: 34 RVDARIIKTGF--DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 281 -----------------SVISWSSLILGYAQEENLAEAMELFRQL-RERSLQV-DGFVLS 321
+V++W+ L+ YA+ + EA +LFRQ+ R S + D +
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDT----SVSNSIVDMYLKCGLIDEATELFNE 377
+++ D Q+HA+A K+ G DT +VSN ++ Y + +D A LF E
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKL--GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
+P K+ VT+ +ITGY K GL E++ LF KM +P + VL A
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 51/278 (18%)
Query: 337 KQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN-------------- 382
+++ A K DT SN IV+ L+ G + A ++++EMP KN
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 383 -----------------VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD--VEPDGVAYLA 423
VVTWT+++ Y ++ EA LFR+M PD V +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 424 VLSACSHS---GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
+L C+ + V + + +L D P + + ++ S RLD A L E +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFD--TNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 481 PVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHADAG--SW 536
P K S+ + TL++ G L E + L++ G P ++ + A G +
Sbjct: 211 PEKDSVT-FNTLITGYEKDG---LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
++L L+ + G + A V +I FY D
Sbjct: 267 ALGQQLHALSVTTGFSRDAS-----VGNQILDFYSKHD 299
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/686 (36%), Positives = 396/686 (57%), Gaps = 16/686 (2%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
L L C++ + G +HG VK+ +L+LNN L+DMY+KCG + A +F
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENG 132
+NVVSW ++ GF G+ + QM G VK +E T+ + S + +
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
++H +K F +N +V N+ + Y+KCG ++ A R+F + +K++ +WNA+I G+ +
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
L +M+ G +PD FT S L AC L S+ G ++HGF+I + +
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
+ S++ Y+ CG L + +FD +E KS++SW+++I GY Q A+ +FRQ+
Sbjct: 535 L--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 313 LQVDGFVLSSMMGVFADFALVEQ---GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
+Q+ G SMM VF +L+ G++ HAYA K D ++ S++DMY K G I
Sbjct: 593 IQLCGI---SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
+++++FN + K+ +W +I GYG HGLAKEA+ LF +M PD + +L VL+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI-ESMPVKPSIAI 488
HSGL+ E Y ++ + +KP ++HY+C++D LGRAG+LD+A ++ E M + + I
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 489 WQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARS 548
W++LLS+CR+H +LE+G +V L L+ + P NYV++SN++A G W + ++R+
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 549 KGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALH 608
L+K AG SW+E+++++ F G+ E+I + +E ++ ++G+ H
Sbjct: 830 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS-KMGYRPDTMSVQH 888
Query: 609 DIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKIL 668
D+ EE K E LR HSEKLA+ L++ G IRV+KNLR+C DCH K +SK++
Sbjct: 889 DLSEEEKIEQLRGHSEKLALTYGLIK----TSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
+ VVRD RFH F+ GVCSCGDYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 207/391 (52%), Gaps = 9/391 (2%)
Query: 46 DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
D +L +I MYA CG + + VFD + +N+ W A++ + +N L F +M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 106 SSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRI 164
S++ + P+ FT IKA +S V G+ +HG+ +K+G + VGN+++ Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLF-RKMQEHGE---IPDEFTFTST 220
+A ++FD+MP ++L++WN+MI + G+S++ LL M+E+G+ +PD T +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
L C +G G +HG+ + + V+ +L+D Y KCGC+ A+ +F + K
Sbjct: 299 LPVCAREREIGLGKGVHGWAVK--LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRE--RSLQVDGFVLSSMMGVFADFALVEQGKQ 338
+V+SW++++ G++ E + ++ RQ+ ++ D + + + V + + K+
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 339 IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGL 398
+H Y+ K + V+N+ V Y KCG + A +F+ + K V +W +I G+ +
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
+ ++ +M + + PD ++LSACS
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 400/694 (57%), Gaps = 18/694 (2%)
Query: 4 VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
+S L + + L+ C ++D G ++H +K GF +D+ + LI +Y++ +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRT--VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 64 NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKA 122
A +FD+M R++ SW A++ G+ Q+GNAK L+L S+ ++ + T+ + + A
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSA 256
Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITW 182
G+ IH +K G E V N +ID+Y++ GR+ + ++FD M + LI+W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 183 NAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT 242
N++I Y L + + LF++M+ PD T S LG + + GF +
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 243 SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAM 302
G+ + I ++V Y K G + AR VF+ + VISW+++I GYAQ +EA+
Sbjct: 377 KGW-FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 303 ELFRQLRER-SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDM 361
E++ + E + + S++ + + QG ++H K LD V S+ DM
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 362 YLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAY 421
Y KCG +++A LF ++P N V W +I +G HG ++AV LF++ML + V+PD + +
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 422 LAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMP 481
+ +LSACSHSGLV+E Q F + D + P ++HY C+VD GRAG+L+ A I+SM
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 482 VKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECER 541
++P +IW LLSACRVHG+++LG+ E L ++ ++ +V++SN++A AG W +
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDE 675
Query: 542 LRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVY 601
+R +A KGL+K G S +EVD ++ FY G+ THP+ E++++ L ++ ++K +G+V
Sbjct: 676 IRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK-MIGYVP 734
Query: 602 GVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEF 660
++ L D++++ KE L HSE+LAI AL+ P K IR+FKNLRVCGDCH
Sbjct: 735 DHRFVLQDVEDDEKEHILMSHSERLAIAFALI-----ATPAKTTIRIFKNLRVCGDCHSV 789
Query: 661 IKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
K +SKI + +VRD+ RFH F+ GVCSCGDYW
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 245/475 (51%), Gaps = 18/475 (3%)
Query: 34 LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
LH LV ++ ++ L+++Y G + A FD + R+V +W ++ G+ + GN
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 94 AKA---CLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
+ C SLF M SS + P+ T + +KA +V +G +IH + +K GF W+ V
Sbjct: 133 SSEVIRCFSLF--MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYV 187
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
S+I +YS+ + A +FD MP + + +WNAMI+GY +G + + L L ++
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
D T S L AC G G IH + I G + ++ L+D Y + G L +
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL--FVSNKLIDLYAEFGRLRDC 301
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
++VFD + + +ISW+S+I Y E A+ LF+++R +Q D L S+ + +
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 331 ALVEQGKQIHAYAAKVPSGL-DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
+ + + + + L D ++ N++V MY K GL+D A +FN +P +V++W I
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 390 ITGYGKHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDK 448
I+GY ++G A EA+ ++ M + ++ + +++VL ACS +G + + + RL +
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 449 RMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLE 503
+ + + + D G+ GRL++A +L +P S+ W TL++ HG E
Sbjct: 482 -LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGE 534
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 202 FRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFY 261
++ E EI D T + C +L S +H L+ S +V I+ LV+ Y
Sbjct: 45 WKNGNESKEIDDVHTL---FRYCTNLQS---AKCLHARLVVSKQIQNV--CISAKLVNLY 96
Query: 262 VKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLS 321
G + AR FD I+ + V +W+ +I GY + N +E + F S +
Sbjct: 97 CYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY--R 154
Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
+ V V G +IH A K D V+ S++ +Y + + A LF+EMPV+
Sbjct: 155 TFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 382 NVVTWTVIITGYGKHGLAKEAVGL---FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
++ +W +I+GY + G AKEA+ L R M D V +++LSAC+ +G
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGV 267
Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
S ++ + + ++D GRL + + + + M V+ I+ W +++ A
Sbjct: 268 TIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKA 322
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 383/709 (54%), Gaps = 40/709 (5%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L C+K+ G+Q+HG +VKMG++ DL + N L+ YA+CGE++ A VFD+M ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
VSWT+++CG+ + AK + LF +M V PN T+ I A L +E G +++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
SG E N ++ ++++DMY KC I+ A R+FD A +L NAM + YV G + +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
L +F M + G PD + S + +C L ++ G HG+++ +GF I +L
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--ICNAL 378
Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL---- 313
+D Y+KC A R+FD + K+V++W+S++ GY + + A E F + E+++
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 314 ----------------------------QVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
DG + S+ ++ K I+ Y K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
LD + ++VDM+ +CG + A +FN + ++V WT I G A+ A+ L
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLG 465
F M+ ++PDGVA++ L+ACSH GLV++ +E F + + P HY C+VD LG
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 466 RAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVM 525
RAG L+EA LIE MP++P+ IW +LL+ACRV G++E+ E + L + +YV+
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL 678
Query: 526 MSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQV 585
+SN++A AG WN+ ++R + KGL+K G S +++ + H F GD++HP I +
Sbjct: 679 LSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
L E+ +R LG V + L D+ E+ K L HSEKLA+ L+ + G I
Sbjct: 739 LDEVSQR-ASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLI----SSNKGTTI 793
Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
R+ KNLRVC DCH F K SK+ ++RD RFH G CSCGD+W
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 249/534 (46%), Gaps = 78/534 (14%)
Query: 81 WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
+ +L+ G+ +G + LF +M +S + P+++T + A + NG+QIHG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
K G+ + V NS++ Y++CG ++ A ++FD M +++++W +MI GY ++ +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 201 LFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD 259
LF +M E+ P+ T + AC L + G +++ F+ SG V ++ +LVD
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279
Query: 260 FYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
Y+KC + A+R+FD ++ +++ Y ++ EA+ +F + + ++ D
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKC------------ 365
+ S + + + GK H Y + +G ++ ++ N+++DMY+KC
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 366 -------------------GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
G +D A E F MP KN+V+W II+G + L +EA+ +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 407 RKMLLDD-VEPDGVAYLAVLSACSHSGLVEESQE-YFSRLCNDKRMKPRIEHYSCIVDSL 464
M + V DGV +++ SAC H G ++ ++ Y+ N ++ R+ + +VD
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG--TTLVDMF 515
Query: 465 GRAGRLDEAKNLIESMP----------------------------------VKPSIAIWQ 490
R G + A ++ S+ +KP +
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNP--VNYVMMSNIHADAGSWNECERL 542
L+AC G ++ G+E+ +L+L G +P V+Y M ++ AG E +L
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 36/313 (11%)
Query: 11 ERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
+R + ++ CS+ + +G HG +++ GF + N LIDMY KC + A +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 71 DKMLERNVVSWTALMCGFLQNGNAKA-------------------------------CLS 99
D+M + VV+W +++ G+++NG A +
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 100 LFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMY 158
+FC M S V + T+ + A G L +++ I+ K+G + + +G +++DM+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 159 SKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFT 218
S+CG A +F+ + + + W A I +AG +++ + LF M E G PD F
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 219 STLKACGSLGSVGGGTQI-HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-DL 276
L AC G V G +I + L G S + V G +VD + G L EA ++ D+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGV--SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 277 IEQKSVISWSSLI 289
+ + + W+SL+
Sbjct: 634 PMEPNDVIWNSLL 646
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 219 STLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC---LVEARRVFD 275
S+LK C ++ + H L G V T+ LV + G L A+ VF+
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTIT--KLVARSCELGTRESLSFAKEVFE 91
Query: 276 LIEQK-SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
E + ++SLI GYA EA+ LF ++ + D + + A
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151
Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
G QIH K+ D V NS+V Y +CG +D A ++F+EM +NVV+WT +I GY
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 395 KHGLAKEAVGLFRKMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPR 453
+ AK+AV LF +M+ D +V P+ V + V+SAC+ +E ++ ++ + N ++
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVN 270
Query: 454 IEHYSCIVDSLGRAGRLDEAKNLIE 478
S +VD + +D AK L +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFD 295
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/669 (36%), Positives = 403/669 (60%), Gaps = 18/669 (2%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G+Q+H +VK G + ++N LI++Y KCG + A +FDK ++VV+W +++ G+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
NG L +F M + V+ +E + ++ IK L + Q+H +K GF ++ +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 151 GNSIIDMYSKCGRINEAARMF-DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
+++ YSKC + +A R+F ++ ++++W AMI+G++ ++ + LF +M+ G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
P+EFT++ L A V +++H ++ + + S + + +L+D YVK G + E
Sbjct: 393 VRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERS--STVGTALLDAYVKLGKVEE 446
Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV-FA 328
A +VF I+ K +++WS+++ GYAQ A+++F +L + ++ + F SS++ V A
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 329 DFALVEQGKQIHAYAAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
A + QGKQ H +A K S LD+S VS++++ MY K G I+ A E+F K++V+W
Sbjct: 507 TNASMGQGKQFHGFAIK--SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564
Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
+I+GY +HG A +A+ +F++M V+ DGV ++ V +AC+H+GLVEE ++YF +
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
D ++ P EH SC+VD RAG+L++A +IE+MP IW+T+L+ACRVH ELGR
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684
Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
E ++ + ++ YV++SN++A++G W E ++RKL + +KK G SW+EV +
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744
Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKL 626
+ F GD +HPL ++I+ L ++ R+K +LG+ Y L DI +E KE L HSE+L
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLK-DLGYEPDTSYVLQDIDDEHKEAVLAQHSERL 803
Query: 627 AIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG- 685
AI L+ G + + KNLRVCGDCH IK ++KI + VVRD+ RFH F
Sbjct: 804 AIAFGLIA----TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSD 859
Query: 686 GVCSCGDYW 694
GVCSCGD+W
Sbjct: 860 GVCSCGDFW 868
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 261/496 (52%), Gaps = 18/496 (3%)
Query: 30 YGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFL 89
+G QLH +K GF D+ + L+D Y K VFD+M ERNVV+WT L+ G+
Sbjct: 111 FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 90 QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV---ENGMQIHGMCMKSGFEW 146
+N L+LF +M + +PN FT + A GVL+ G+Q+H + +K+G +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
V NS+I++Y KCG + +A +FD KS++TWN+MI+GY G + L +F M+
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
+ E +F S +K C +L + Q+H ++ GF + I +L+ Y KC
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN--IRTALMVAYSKCTA 345
Query: 267 LVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
+++A R+F I +V+SW+++I G+ Q + EA++LF +++ + ++ + F S ++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
V ++HA K ++V +++D Y+K G ++EA ++F+ + K++V
Sbjct: 406 ALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
W+ ++ GY + G + A+ +F ++ ++P+ + ++L+ C+ + + F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGD---- 501
R+ + S ++ + G ++ A+ + + K ++ W +++S HG
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-WNSMISGYAQHGQAMKA 580
Query: 502 LELGREVGEILLRLDG 517
L++ +E+ + +++DG
Sbjct: 581 LDVFKEMKKRKVKMDG 596
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 243/454 (53%), Gaps = 15/454 (3%)
Query: 3 RVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE 62
R+++ +SE A ++ C+ L + QLH ++VK GF FD + L+ Y+KC
Sbjct: 287 RLNYVRLSESS-FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 63 MNGACAVFDKM-LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
M A +F ++ NVVSWTA++ GFLQN + + LF +M V+PNEFT S +
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
A V+S E +H +K+ +E + VG +++D Y K G++ EAA++F + K ++
Sbjct: 406 ALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL-GSVGGGTQIHGFL 240
W+AM+AGY G ++ + +F ++ + G P+EFTF+S L C + S+G G Q HGF
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
I S S+ ++ +L+ Y K G + A VF +K ++SW+S+I GYAQ +
Sbjct: 522 IKSRLDSSL--CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS-IV 359
A+++F+++++R +++DG + LVE+G++ + T NS +V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 360 DMYLKCGLIDEATELFNEMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEP-D 417
D+Y + G +++A ++ MP T W I+ H K +G + ++P D
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH--KKTELGRLAAEKIIAMKPED 697
Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
AY+ + + + SG +E + +L N++ +K
Sbjct: 698 SAAYVLLSNMYAESGDWQERAK-VRKLMNERNVK 730
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 227/443 (51%), Gaps = 23/443 (5%)
Query: 69 VFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS 128
+FDK R+ S+ +L+ GF ++G + LF + ++ + S+ +K S L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 129 VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
G Q+H C+K GF + VG S++D Y K + ++FD M ++++TW +I+G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 189 YVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS 248
Y +D+ L LF +MQ G P+ FTF + L G G G Q+H ++ +G +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 249 VKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL 308
+ ++ SL++ Y+KCG + +AR +FD E KSV++W+S+I GYA EA+ +F +
Sbjct: 229 IP--VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLI 368
R +++ +S++ + A+ + +Q+H K D ++ +++ Y KC +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 369 DEATELFNEMP-VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
+A LF E+ V NVV+WT +I+G+ ++ +EAV LF +M V P+ Y +L+A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 428 CS-------HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM 480
H+ +V+ + E S + + ++D+ + G+++EA + +
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYVKLGKVEEAAKVFSGI 454
Query: 481 PVKPSIAIWQTLLSACRVHGDLE 503
K +A W +L+ G+ E
Sbjct: 455 DDKDIVA-WSAMLAGYAQTGETE 476
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 151/270 (55%), Gaps = 6/270 (2%)
Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
R+ A +FD P + ++ +++ G+ G + + LF + G D F+S LK
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
+L G Q+H I GF V + SLVD Y+K + R+VFD +++++V
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
++W++LI GYA+ E + LF +++ Q + F ++ +GV A+ + +G Q+H
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 343 AAKVPSGLDTS--VSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAK 400
K +GLD + VSNS++++YLKCG + +A LF++ VK+VVTW +I+GY +GL
Sbjct: 220 VVK--NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
EA+G+F M L+ V ++ +V+ C++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
L A +FD + S+ SL+ G++++ EA LF + +++D + SS++ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
A G+Q+H K D SV S+VD Y+K + ++F+EM +NVVTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
T +I+GY ++ + E + LF +M + +P+ + A L + G+ + + +
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG-DLE 503
+ + I + +++ + G + +A+ L + VK S+ W +++S +G DLE
Sbjct: 223 NG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLE 278
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/678 (35%), Positives = 392/678 (57%), Gaps = 22/678 (3%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G Q+H ++ G + + N L+ MY K G++ + + R++V+W ++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSG-FEWNPV 149
N L +M V+P+EFT+S+ + A L + G ++H +K+G + N
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH- 208
VG++++DMY C ++ R+FD M + + WNAMIAGY + + LLLF M+E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLV 268
G + + T + AC G+ IHGF++ G + +L+D Y + G +
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL--DRDRFVQNTLMDMYSRLGKID 457
Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR--ER---------SLQVDG 317
A R+F +E + +++W+++I GY E+ +A+ L +++ ER SL+ +
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
L +++ A + + +GK+IHAYA K D +V +++VDMY KCG + + ++F++
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
+P KNV+TW VII YG HG +EA+ L R M++ V+P+ V +++V +ACSHSG+V+E
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 438 QEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA-IWQTLLSAC 496
F + D ++P +HY+C+VD LGRAGR+ EA L+ MP + A W +LL A
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 697
Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
R+H +LE+G + L++L+ + +YV+++NI++ AG W++ +R+ + +G++K G
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 757
Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
SW+E E+H F GD +HP +EK+ L + +RM++E G+V LH+++E+ KE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE-GYVPDTSCVLHNVEEDEKE 816
Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
L HSEKLAI G LN PG +IRV KNLRVC DCH K +SKI+ ++RD
Sbjct: 817 ILLCGHSEKLAIAF----GILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 677 ATRFHRFEGGVCSCGDYW 694
RFHRF+ G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 246/501 (49%), Gaps = 23/501 (4%)
Query: 28 LDYGVQLHGALVKMGFSFD-LMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
++ G Q+H + K G+ D + + N L+++Y KCG+ VFD++ ERN VSW +L+
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 87 GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVEN---GMQIHGMCMKSG 143
+ L F M +V+P+ FTL + + A L E G Q+H ++ G
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 144 FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFR 203
E N + N+++ MY K G++ + + + L+TWN +++ + L R
Sbjct: 233 -ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 204 KMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVK 263
+M G PDEFT +S L AC L + G ++H + + +G + + +LVD Y
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCN 350
Query: 264 CGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSS 322
C ++ RRVFD + + + W+++I GY+Q E+ EA+ LF + E + L + ++
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
++ + + IH + K D V N+++DMY + G ID A +F +M ++
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-----------VEPDGVAYLAVLSACSHS 431
+VTW +ITGY ++A+ L KM + ++P+ + + +L +C+
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530
Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
+ + +E + + + + S +VD + G L ++ + + +P K ++ W
Sbjct: 531 SALAKGKEIHAYAIKNN-LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588
Query: 492 LLSACRVHGDLELGREVGEIL 512
++ A +HG+ G+E ++L
Sbjct: 589 IIMAYGMHGN---GQEAIDLL 606
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 205/438 (46%), Gaps = 12/438 (2%)
Query: 63 MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA 122
++GA ++F R+ W L+ +++ + + + M +KP+ + +KA
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 123 SGVLSSVENGMQIHGMCMKSGFEWNPV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
L +E G QIH K G+ + V V N+++++Y KCG ++FD + ++ ++
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG---GTQIHG 238
WN++I+ + L FR M + P FT S + AC +L G G Q+H
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 239 FLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENL 298
+ + G + + I +LV Y K G L ++ + + +++W++++ Q E L
Sbjct: 227 YGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 299 AEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTS-VSNS 357
EA+E R++ ++ D F +SS++ + ++ GK++HAYA K S + S V ++
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD-DVEP 416
+VDMY C + +F+ M + + W +I GY ++ KEA+ LF M +
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
+ V+ AC SG + + + R + ++D R G++D A +
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ-NTLMDMYSRLGKIDIAMRI 462
Query: 477 IESMPVKPSIAIWQTLLS 494
M + + W T+++
Sbjct: 463 FGKMEDR-DLVTWNTMIT 479
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 165/316 (52%), Gaps = 15/316 (4%)
Query: 5 SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
S L++ +A + C ++ +HG +VK G D + N L+DMY++ G+++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 65 GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQM---------GSS--SVKPNE 113
A +F KM +R++V+W ++ G++ + + + L L +M G+S S+KPN
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 114 FTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDV 173
TL T + + LS++ G +IH +K+ + VG++++DMY+KCG + + ++FD
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 174 MPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGG 233
+P K++ITWN +I Y + G + + L R M G P+E TF S AC G V G
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQ--KSVISWSSLILG 291
+I +++ + + +VD + G + EA ++ +++ + +WSSL LG
Sbjct: 638 LRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL-LG 695
Query: 292 YAQEENLAEAMELFRQ 307
++ N E E+ Q
Sbjct: 696 ASRIHNNLEIGEIAAQ 711
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 27/288 (9%)
Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
+ +S W L+ + L EA+ + + ++ D + +++ AD +E GK
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 338 QIHAYAAKVPSGLDT-SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKH 396
QIHA+ K G+D+ +V+N++V++Y KCG ++F+ + +N V+W +I+
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 397 GLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH----SGLVEESQEYFSRLCNDKRMKP 452
+ A+ FR ML ++VEP ++V++ACS+ GL+ Q + L
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL-------R 230
Query: 453 RIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAIWQTLLSA-CRVHGDLELGRE 507
+ E S I+++L G+ G+L +K L+ S + + W T+LS+ C+ LE
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEY 289
Query: 508 VGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
+ E++ L+G P + + S + A C L L K L A
Sbjct: 290 LREMV--LEGVEPDEFTISSVLPA-------CSHLEMLRTGKELHAYA 328
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/709 (34%), Positives = 389/709 (54%), Gaps = 71/709 (10%)
Query: 51 NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
N ++ Y+K G+M+ C FD++ +R+ VSWT ++ G+ G + + M ++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG-------- 162
P +FTL+ + + +E G ++H +K G N V NS+++MY+KCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 163 -----------------------RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
+++ A F+ M + ++TWN+MI+G+ GY + L
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 200 LLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYS---------- 248
+F KM + PD FT S L AC +L + G QIH ++T+GF S
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 249 ------VKTV-------------IAG--SLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
V+T I G +L+D Y+K G + +A+ +F ++ + V++W++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
+I+GY Q + EA+ LFR + + + + L++M+ V + A + GKQIH A K
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAVGLF 406
SVSN+++ MY K G I A+ F+ + ++ V+WT +I +HG A+EA+ LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
ML++ + PD + Y+ V SAC+H+GLV + ++YF + + ++ P + HY+C+VD GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
AG L EA+ IE MP++P + W +LLSACRVH +++LG+ E LL L+ +N Y +
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
+N+++ G W E ++RK + +KK G SW+EV ++H F D THP +I+ +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VI 645
++ +K ++G+V LHD++EE KE+ LR HSEKLAI L+ P K +
Sbjct: 684 KKIWDEIK-KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLI-----STPDKTTL 737
Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
R+ KNLRVC DCH IK +SK++ +VRD TRFH F+ G CSC DYW
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 239/508 (47%), Gaps = 78/508 (15%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG------------- 61
L + L + ++ G ++H +VK+G ++ ++N L++MYAKCG
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 62 ------------------EMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQ 103
+M+ A A F++M ER++V+W +++ GF Q G L +F +
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 104 MGSSSV-KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
M S+ P+ FTL++ + A L + G QIH + +GF+ + +V N++I MYS+CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 163 RI---------------------------------NEAARMFDVMPAKSLITWNAMIAGY 189
+ N+A +F + + ++ W AMI GY
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
G + + LFR M G+ P+ +T + L SL S+ G QIHG + SG YSV
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIE-QKSVISWSSLILGYAQEENLAEAMELFRQL 308
++ +L+ Y K G + A R FDLI ++ +SW+S+I+ AQ + EA+ELF +
Sbjct: 449 S--VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 309 RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT-SVSNSIVDMYLKCGL 367
L+ D + LV QG+Q V + T S +VD++ + GL
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 368 IDEATELFNEMPVK-NVVTWTVIITGYGKH---GLAKEAVGLFRKMLLDDVEPDGVAYLA 423
+ EA E +MP++ +VVTW +++ H L K A ++LL + E G AY A
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA---ERLLLLEPENSG-AYSA 622
Query: 424 VLSACSHSGLVEESQEYFSRLCNDKRMK 451
+ + S G EE+ + + D R+K
Sbjct: 623 LANLYSACGKWEEAAK-IRKSMKDGRVK 649
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 38/318 (11%)
Query: 8 LVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC------- 60
L +R LA L C+ L G Q+H +V GF ++ N LI MY++C
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 61 --------------------------GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNA 94
G+MN A +F + +R+VV+WTA++ G+ Q+G+
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 95 KACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSI 154
++LF M +PN +TL+ + + L+S+ +G QIHG +KSG ++ V N++
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 155 IDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
I MY+K G I A+R FD++ + ++W +MI G++++ L LF M G PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARR 272
T+ AC G V G Q F + + T+ +VD + + G L EA+
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 273 VFDLIE-QKSVISWSSLI 289
+ + + V++W SL+
Sbjct: 573 FIEKMPIEPDVVTWGSLL 590
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS-NSIVDMYLKCGLIDEATELFN 376
++++++M V++ + G +HA L T+ S N+++ Y K G +D E F+
Sbjct: 50 YLMNNLMNVYS-----KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFD 104
Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
++P ++ V+WT +I GY G +A+ + M+ + +EP VL++ + + +E
Sbjct: 105 QLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET 164
Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
++ S + ++ + + +++ + G AK + + M V+ I+ W +++
Sbjct: 165 GKKVHSFIVK-LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR-DISSWNAMIALH 222
Query: 497 RVHGDLELG 505
G ++L
Sbjct: 223 MQVGQMDLA 231
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/678 (36%), Positives = 378/678 (55%), Gaps = 44/678 (6%)
Query: 51 NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLF-CQMGSSSV 109
N+L+ Y+K G ++ + F+K+ +R+ V+W L+ G+ +G A + + M S
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 110 KPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSK--------- 160
TL T +K S V G QIHG +K GFE +VG+ ++ MY+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 161 ----------------------CGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
CG I +A ++F M S ++W AMI G G + +
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQNGLAKEA 254
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+ FR+M+ G D++ F S L ACG LG++ G QIH +I + F + + +L+
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI--YVGSALI 312
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
D Y KC CL A+ VFD ++QK+V+SW+++++GY Q EA+++F ++ + D +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFN 376
L + A+ + +E+G Q H A + SGL +VSNS+V +Y KCG ID++T LFN
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKA--ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
EM V++ V+WT +++ Y + G A E + LF KM+ ++PDGV V+SACS +GLVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
Q YF + ++ + P I HYSC++D R+GRL+EA I MP P W TLLSAC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAG 556
R G+LE+G+ E L+ LD +P Y ++S+I+A G W+ +LR+ R K +KK G
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Query: 557 RSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKE 616
+SW++ ++H F D++ P ++I+ L E+ ++ + G+ + HD++E K
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDN-GYKPDTSFVHHDVEEAVKV 669
Query: 617 ESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRD 676
+ L HSE+LAI L+ G+ IRV KNLRVC DCH K +S + +VRD
Sbjct: 670 KMLNYHSERLAIAFGLIF----VPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRD 725
Query: 677 ATRFHRFEGGVCSCGDYW 694
A RFHRF+ G CSCGD+W
Sbjct: 726 AVRFHRFKDGTCSCGDFW 743
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 238/479 (49%), Gaps = 38/479 (7%)
Query: 6 FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
FS R L L+ S N + G Q+HG ++K+GF L++ + L+ MYA G ++
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 66 ACAVFDKMLERNVV------------------------------SWTALMCGFLQNGNAK 95
A VF + +RN V SW A++ G QNG AK
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 96 ACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSII 155
+ F +M +K +++ + + A G L ++ G QIH +++ F+ + VG+++I
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 156 DMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
DMY KC ++ A +FD M K++++W AM+ GY G +++ + +F MQ G PD +
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
T + AC ++ S+ G+Q HG ITSG + V ++ SLV Y KCG + ++ R+F+
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYV--TVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
+ + +SW++++ YAQ E ++LF ++ + L+ DG L+ ++ + LVE+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 336 GKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITG 392
G++ G+ S+ + ++D++ + G ++EA N MP + + WT +++
Sbjct: 491 GQRYFKLMTS-EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMK 451
G +G + L +++P A +LS+ S +S R +K +K
Sbjct: 550 CRNKG--NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 200/445 (44%), Gaps = 79/445 (17%)
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY----- 189
IHG +++ + N+I+ Y+ A R+FD +P +L +WN ++ Y
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 190 ---------------------VLAGYSDKGLL------LFRKMQEHGEIPDEFTFTSTLK 222
++ GYS GL+ M++ T + LK
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVF-------- 274
S G V G QIHG +I GF + ++ L+ Y GC+ +A++VF
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYL--LVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 275 -------------DLIE---------QKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
+IE +K +SW+++I G AQ EA+E FR+++ +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
L++D + S++ + +GKQIHA + V ++++DMY KC + A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
+F+ M KNVV+WT ++ GYG+ G A+EAV +F M ++PD +SAC++
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIESMPVKPSIAI 488
+EE ++ + K + + HY + +SL G+ G +D++ L M V+ +++
Sbjct: 386 SLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS- 439
Query: 489 WQTLLSACRVHGDLELGREVGEILL 513
W ++SA + GR V I L
Sbjct: 440 WTAMVSAY-----AQFGRAVETIQL 459
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 78/405 (19%)
Query: 217 FTSTLKACGSLGSVGGG---TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
++ +K C LG+ IHG +I + PY +T + ++V Y ARRV
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRA-LPYP-ETFLYNNIVHAYALMKSSTYARRV 63
Query: 274 FDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER-----SLQVDGFVLSSMMG--- 325
FD I Q ++ SW++L+L Y++ ++E F +L +R ++ ++G+ LS ++G
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 326 -----VFADFAL-------------------VEQGKQIHAY------------------- 342
+ DF+ V GKQIH
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 343 ---------AAKVPSGLD---TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
A KV GLD T + NS++ L CG+I++A +LF M K+ V+W +I
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMI 242
Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
G ++GLAKEA+ FR+M + ++ D + +VL AC G + E ++ + +
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR-TNF 301
Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
+ I S ++D + L AK + + M K ++ W ++ +G E +
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVG---YGQTGRAEEAVK 357
Query: 511 ILLRLD--GDNPVNYVMMSNIH--ADAGSWNECERLRKLARSKGL 551
I L + G +P +Y + I A+ S E + A + GL
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/664 (34%), Positives = 383/664 (57%), Gaps = 12/664 (1%)
Query: 34 LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGN 93
LH +VK+G+ + + LI+ Y+ CG ++ A VF+ +L +++V W ++ +++NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 94 AKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNS 153
+ L L M + PN +T T +KAS L + + +HG +K+ + +P VG
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 154 IIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPD 213
++ +Y++ G +++A ++F+ MP ++ W+ MIA + G+ ++ + LF +M+E +P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 214 EFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRV 273
EFT +S L C G G Q+HG ++ GF + ++ +L+D Y KC + A ++
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI--YVSNALIDVYAKCEKMDTAVKL 405
Query: 274 FDLIEQKSVISWSSLILGYAQEENLAE---AMELFRQLRERSLQVDGFVLSSMMGVFADF 330
F + K+ +SW+++I+GY ENL E A +FR+ + V SS +G A
Sbjct: 406 FAELSSKNEVSWNTVIVGY---ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
A ++ G Q+H A K + +VSNS++DMY KCG I A +FNEM +V +W +I
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
+GY HGL ++A+ + M D +P+G+ +L VLS CS++GL+++ QE F + D +
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
+P +EHY+C+V LGR+G+LD+A LIE +P +PS+ IW+ +LSA + E R E
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAE 642
Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
+L+++ + YV++SN++A A W +RK + G+KK G SW+E ++H+F
Sbjct: 643 EILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFS 702
Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
G HP + I+ +L + + G+V L D+ +E K++ L VHSE+LA+
Sbjct: 703 VGLSDHPDMKLINGMLEWLNMKATRA-GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761
Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
LVR + I + KNLR+C DCH +K +S I++ V+RD RFH F GVCSC
Sbjct: 762 GLVRMPSSRNR---ILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSC 818
Query: 691 GDYW 694
GD+W
Sbjct: 819 GDHW 822
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 241/496 (48%), Gaps = 18/496 (3%)
Query: 20 RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVV 79
RC KN + +H ++K G DL N L++ Y K G A +FD+M ERN V
Sbjct: 58 RCIQKNDPIS-AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNV 116
Query: 80 SWTALMCGFLQNGNAKAC---LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
S+ L G+ AC + L+ ++ + N ++ +K L E +H
Sbjct: 117 SFVTLAQGY-------ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169
Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
+K G++ N VG ++I+ YS CG ++ A +F+ + K ++ W +++ YV GY +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
L L M+ G +P+ +TF + LKA LG+ +HG ++ + Y + +
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC--YVLDPRVGVG 287
Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
L+ Y + G + +A +VF+ + + V+ WS +I + Q EA++LF ++RE + +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
F LSS++ A G+Q+H KV LD VSN+++D+Y KC +D A +LF
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 377 EMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
E+ KN V+W +I GY G +A +FR+ L + V V + + L AC+ ++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 437 SQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSAC 496
+ K ++ + ++D + G + A+++ M +A W L+S
Sbjct: 468 GVQVHGLAIKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGY 525
Query: 497 RVHGDLELGREVGEIL 512
HG LGR+ IL
Sbjct: 526 STHG---LGRQALRIL 538
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 202/368 (54%), Gaps = 6/368 (1%)
Query: 28 LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
D+ +HG ++K + D + L+ +Y + G+M+ A VF++M + +VV W+ ++
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
F QNG + LF +M + V PNEFTLS+ + + G Q+HG+ +K GF+ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
V N++ID+Y+KC +++ A ++F + +K+ ++WN +I GY G K +FR+
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCL 267
+ E TF+S L AC SL S+ G Q+HG I + + K ++ SL+D Y KCG +
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN--NAKKVAVSNSLIDMYAKCGDI 500
Query: 268 VEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVF 327
A+ VF+ +E V SW++LI GY+ +A+ + +++R + +G ++
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 328 ADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVV 384
++ L++QG++ + G++ + + +V + + G +D+A +L +P + +V+
Sbjct: 561 SNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 385 TWTVIITG 392
W +++
Sbjct: 620 IWRAMLSA 627
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/665 (35%), Positives = 370/665 (55%), Gaps = 11/665 (1%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G +HG V G +L+L ++++ MY K + A VFD+M E++ + W ++ G+ +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 91 NGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
N + +F + S + + TL + A L + GMQIH + K+G +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
V I +YSKCG+I + +F ++ +NAMI GY G ++ L LF+++ G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
T S + G L + IHG+ + S F ++ +L Y K +
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHAS--VSTALTTVYSKLNEIES 372
Query: 270 ARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFAD 329
AR++FD +KS+ SW+++I GY Q +A+ LFR++++ + ++ ++ A
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 330 FALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVI 389
+ GK +H VS +++ MY KCG I EA LF+ M KN VTW +
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTM 492
Query: 390 ITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKR 449
I+GYG HG +EA+ +F +ML + P V +L VL ACSH+GLV+E E F+ + +
Sbjct: 493 ISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 450 MKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVG 509
+P ++HY+C+VD LGRAG L A IE+M ++P ++W+TLL ACR+H D L R V
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 612
Query: 510 EILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFF 569
E L LD DN +V++SNIH+ ++ + +R+ A+ + L K G + +E+ + H F
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 672
Query: 570 YGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
GD +HP ++I++ L ++E +M+E G+ + ALHD++EE +E ++VHSE+LAI
Sbjct: 673 TSGDQSHPQVKEIYEKLEKLEGKMREA-GYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
L+ +PG IR+ KNLRVC DCH K +SKI + V VVRDA RFH F+ GVCS
Sbjct: 732 FGLI----ATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCS 787
Query: 690 CGDYW 694
CGDYW
Sbjct: 788 CGDYW 792
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 223/455 (49%), Gaps = 24/455 (5%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMG-FSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
L D L ++ L G+Q+H K G +S D +L I +Y+KCG++ A+F +
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREF 282
Query: 74 LERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGM 133
+ ++V++ A++ G+ NG + LSLF ++ S + TL + + SG L +
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---Y 339
Query: 134 QIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAG 193
IHG C+KS F + V ++ +YSK I A ++FD P KSL +WNAMI+GY G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 194 YSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
++ + LFR+MQ+ P+ T T L AC LG++ G +H + ++ F S+ +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YV 457
Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL 313
+ +L+ Y KCG + EARR+FDL+ +K+ ++W+++I GY EA+ +F ++ +
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 314 QVDGFVLSSMMGVFADFALVEQGKQ-----IHAYAAKVPSGLDTSVSN--SIVDMYLKCG 366
++ + LV++G + IH Y G + SV + +VD+ + G
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY------GFEPSVKHYACMVDILGRAG 571
Query: 367 LIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
+ A + M ++ W ++ H A + K+ +++PD V Y +L
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF--ELDPDNVGYHVLL 629
Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCI 460
S HS Q R KR + Y+ I
Sbjct: 630 SNI-HSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 238/522 (45%), Gaps = 23/522 (4%)
Query: 23 SKNLLLDYG---------VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKM 73
SKN LD+ Q H ++ GF D+ L L + G + A +F +
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 74 LERNVVSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENG 132
+V + LM GF N + + LS+F + S+ +KPN T + I A+ G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
IHG + G + ++G++I+ MY K R+ +A ++FD MP K I WN MI+GY
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 193 GYSDKGLLLFRKM-QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKT 251
+ + +FR + E D T L A L + G QIH +G YS
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHDY 257
Query: 252 VIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRER 311
V+ G + Y KCG + +F + +++++++I GY ++ LF++L
Sbjct: 258 VLTG-FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 312 SLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEA 371
++ L S++ V L+ IH Y K SVS ++ +Y K I+ A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 372 TELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHS 431
+LF+E P K++ +W +I+GY ++GL ++A+ LFR+M + P+ V +LSAC+
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
G + + + L + I + ++ + G + EA+ L + M K + W T
Sbjct: 434 GALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNT 491
Query: 492 LLSACRVHGDLELGREVGEILLRL--DGDNPVNYVMMSNIHA 531
++S +HG G+E I + G P + ++A
Sbjct: 492 MISGYGLHGQ---GQEALNIFYEMLNSGITPTPVTFLCVLYA 530
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/674 (35%), Positives = 376/674 (55%), Gaps = 10/674 (1%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
LR C L G ++H +V+ G+ D+ + N LI MY KCG++ A +FD+M R++
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
+SW A++ G+ +NG L LF M SV P+ TL++ I A +L G IH
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+ +GF + V NS+ MY G EA ++F M K +++W MI+GY DK
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+ +R M + PDE T + L AC +LG + G ++H I + V ++A +L+
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV--IVANNLI 440
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
+ Y KC C+ +A +F I +K+VISW+S+I G EA+ RQ++ +LQ +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAI 499
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
L++ + A + GK+IHA+ + GLD + N+++DMY++CG ++ A FN
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQ 438
K+V +W +++TGY + G V LF +M+ V PD + ++++L CS S +V +
Sbjct: 560 K-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
YFS++ D + P ++HY+C+VD LGRAG L EA I+ MPV P A+W LL+ACR+
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 499 HGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRS 558
H ++LG + + LD + Y+++ N++AD G W E ++R++ + GL AG S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 559 WVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEES 618
WVEV ++H F D HP T++I+ VL ++M E+G + + D E S++E
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM-SEVGLTKISESSSMDETEISRDEI 796
Query: 619 LRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
HSE+ AI L+ N PG I V KNL +C +CH+ +K +SK ++ VRDA
Sbjct: 797 FCGHSERKAIAFGLI----NTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 852
Query: 679 RFHRFEGGVCSCGD 692
FH F+ G CSCGD
Sbjct: 853 HFHHFKDGECSCGD 866
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 250/479 (52%), Gaps = 11/479 (2%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
+R C + G +++ + S + L N + M+ + G + A VF KM ERN+
Sbjct: 101 VRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNL 160
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQM-GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
SW L+ G+ + G + L+ +M VKP+ +T ++ G + + G ++H
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
++ G+E + V N++I MY KCG + A +FD MP + +I+WNAMI+GY G +
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSL 257
GL LF M+ PD T TS + AC LG G IH ++IT+GF +V + SL
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSL 338
Query: 258 VDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDG 317
Y+ G EA ++F +E+K ++SW+++I GY +A++ +R + + S++ D
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 318 FVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
+++++ A ++ G ++H A K V+N++++MY KC ID+A ++F+
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458
Query: 378 MPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEES 437
+P KNV++WT II G + EA+ R+M + ++P+ + A L+AC+ G +
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCG 517
Query: 438 QEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
+E + + R ++ + + ++D R GR++ A + S K + W LL+
Sbjct: 518 KEIHAHVL---RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLT 571
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 212/414 (51%), Gaps = 5/414 (1%)
Query: 87 GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
G NG + + L M V +E ++ + E G +++ + + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
+GN+ + M+ + G + +A +F M ++L +WN ++ GY GY D+ + L+ +M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 207 EHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
G + PD +TF L+ CG + + G ++H ++ G+ + V +L+ YVKCG
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVKCG 245
Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
+ AR +FD + ++ +ISW+++I GY + E +ELF +R S+ D L+S++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
G+ IHAY +D SV NS+ MYL G EA +LF+ M K++V+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
WT +I+GY + L +A+ +R M D V+PD + AVLSAC+ G ++ E +L
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLA 424
Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
R+ + + +++ + +D+A ++ ++P K I+ W ++++ R++
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 54/383 (14%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
+A L C+ LD GV+LH +K +++ N+LI+MY+KC ++ A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
+NV+SWT+++ G N L QM +++PN TL+ + A + ++ G +
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
IH +++G + + N+++DMY +CGR+N A F+ K + +WN ++ GY G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQ 578
Query: 195 SDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS---------------------------- 226
+ LF +M + PDE TF S L C
Sbjct: 579 GSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYAC 638
Query: 227 ----LGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVD-----FYVKCGCLVEARRVFDLI 277
LG G + H F+ P + + G+L++ + G L A+ +F+L
Sbjct: 639 VVDLLGRAGELQEAHKFI--QKMPVTPDPAVWGALLNACRIHHKIDLGEL-SAQHIFEL- 694
Query: 278 EQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK 337
++KSV + L YA E ++ R ++E L VD A + VE
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD-----------AGCSWVEVKG 743
Query: 338 QIHAYAAKVPSGLDTSVSNSIVD 360
++HA+ + T N++++
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLE 766
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
G L EAM+L ++E + VD V +++ + E+G ++++ A S L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
+ N+ + M+++ G + +A +F +M +N+ +W V++ GY K G EA+ L+ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 411 -LDDVEPDGVAYLAVLSACS-----------HSGLVEESQEY------------------ 440
+ V+PD + VL C H +V E
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 441 -FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESM---PVKPSIAIWQTLLSAC 496
+RL D+ + I ++ ++ G E L +M V P + +++SAC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 497 RVHGDLELGREVGEILLRLDGDNPVNYV-MMSNIHADAGSWNECERL 542
+ GD LGR++ ++ ++ ++ ++ +AGSW E E+L
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/789 (31%), Positives = 410/789 (51%), Gaps = 118/789 (14%)
Query: 13 QRLADSLRCCS--KNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
R A +LR C + L +HG ++ GF + N LID+Y K E+N A +F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 71 DKMLE---------------------------------RNVVSWTALMCGFLQNGNAKAC 97
D++ E R+ V + A++ GF N + +
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 98 LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG-MQIHGMCMKSGFEWNPVVGNSIID 156
++LFC+M KP+ FT ++ + +++ E +Q H +KSG + V N+++
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVS 192
Query: 157 MYSKCGR----INEAARMFDVMPAKS--------------------------------LI 180
+YSKC ++ A ++FD + K L+
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
+NAMI+GYV G+ + L + R+M G DEFT+ S ++AC + G + G Q+H ++
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 241 IT-SGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
+ F + SLV Y KCG EAR +F+ + K ++SW++L+ GY ++
Sbjct: 313 LRREDFSFHFDN----SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 300 EAMELFRQLRERS--------------------------LQVDGF-----VLSSMMGVFA 328
EA +F++++E++ ++ +GF S + A
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 329 DFALVEQGKQIHAYAAKVPSGLDTSVS--NSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
G+Q HA K+ G D+S+S N+++ MY KCG+++EA ++F MP + V+W
Sbjct: 429 VLGAYCNGQQYHAQLLKI--GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCN 446
+I G+HG EAV ++ +ML + PD + L VL+ACSH+GLV++ ++YF +
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
R+ P +HY+ ++D L R+G+ +A+++IES+P KP+ IW+ LLS CRVHG++ELG
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 507 EVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEI 566
+ L L ++ Y+++SN+HA G W E R+RKL R +G+KK SW+E++ ++
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 567 HFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEES-KEESLRVHSEK 625
H F D +HP E ++ L ++ K M+ LG+V + LHD++ + KE+ L HSEK
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMR-RLGYVPDTSFVLHDVESDGHKEDMLTTHSEK 725
Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
+A+ L++ PG IR+FKNLR CGDCH F + LS +++ ++RD RFH F
Sbjct: 726 IAVAFGLMK----LPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRN 781
Query: 686 GVCSCGDYW 694
G CSCG++W
Sbjct: 782 GECSCGNFW 790
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/664 (34%), Positives = 374/664 (56%), Gaps = 10/664 (1%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
Q+H L+ +G F L LI + G++ A VFD + + W A++ G+ +N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
+ + L ++ M + V P+ FT +KA LS ++ G +H + GF+ + V N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 153 SIIDMYSKCGRINEAARMFD--VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
+I +Y+KC R+ A +F+ +P +++++W A+++ Y G + L +F +M++
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
PD S L A L + G IH ++ G +I SL Y KCG + A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATA 276
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
+ +FD ++ ++I W+++I GYA+ EA+++F ++ + ++ D ++S + A
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
+EQ + ++ Y + D +S++++DM+ KCG ++ A +F+ ++VV W+ +I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
GYG HG A+EA+ L+R M V P+ V +L +L AC+HSG+V E +F+R+ D ++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKI 455
Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
P+ +HY+C++D LGRAG LD+A +I+ MPV+P + +W LLSAC+ H +ELG +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
L +D N +YV +SN++A A W+ +R + KGL K G SWVEV + F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 571 GGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGL 630
GD +HP E+I + + +E R+KE GFV +LHD+ +E EE+L HSE++AI
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEG-GFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634
Query: 631 ALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSC 690
L+ + G +R+ KNLR C +CH K +SK++ VVRD RFH F+ GVCSC
Sbjct: 635 GLI----STPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690
Query: 691 GDYW 694
GDYW
Sbjct: 691 GDYW 694
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 201/411 (48%), Gaps = 7/411 (1%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFD--KMLER 76
L+ CS L G +H + ++GF D+ + N LI +YAKC + A VF+ + ER
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 77 NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
+VSWTA++ + QNG L +F QM VKP+ L + + A L ++ G IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
+K G E P + S+ MY+KCG++ A +FD M + +LI WNAMI+GY GY+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
+ + +F +M PD + TS + AC +GS+ ++ ++ S Y I+ +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD--YRDDVFISSA 363
Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
L+D + KCG + AR VFD + V+ WS++I+GY EA+ L+R + + +
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFN 376
++ +V +G A ++D+ + G +D+A E+
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 377 EMPVKNVVT-WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
MPV+ VT W +++ KH + +G + L ++P + LS
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLS 532
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
+ ++ C++ L+ ++ + + + D+ +++ LIDM+AKCG + GA VFD+ L
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
+R+VV W+A++ G+ +G A+ +SL+ M V PN+ T + A V G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAG 188
+ID+ + G +++A + MP + +T W A+++
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 343/578 (59%), Gaps = 8/578 (1%)
Query: 117 STNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPA 176
+T +K V + G +H ++S F + V+GN++++MY+KCG + EA ++F+ MP
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
+ +TW +I+GY LL F +M G P+EFT +S +KA + G Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
HGF + GF +V + +L+D Y + G + +A+ VFD +E ++ +SW++LI G+A+
Sbjct: 184 HGFCVKCGFDSNVH--VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
+A+ELF+ + + F +S+ G + +EQGK +HAY K L N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
+++DMY K G I +A ++F+ + ++VV+W ++T Y +HG KEAV F +M + P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
+ +++L+VL+ACSHSGL++E Y+ + D + P HY +VD LGRAG L+ A
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
IE MP++P+ AIW+ LL+ACR+H + ELG E + LD D+P +V++ NI+A G W
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
N+ R+RK + G+KK SWVE++ IH F D+ HP E+I + E+ ++K E
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK-E 539
Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
LG+V + + + ++ +E +L+ HSEK+A+ AL LN PG I + KN+RVCGD
Sbjct: 540 LGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFAL----LNTPPGSTIHIKKNIRVCGD 595
Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
CH IK SK++ +VRD RFH F+ G CSC DYW
Sbjct: 596 CHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 229/435 (52%), Gaps = 10/435 (2%)
Query: 2 NRVSFSLVSERQRLADSL-RCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
N + S + +R ++L + C+ LL G +H +++ F D+++ N L++MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 61 GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
G + A VF+KM +R+ V+WT L+ G+ Q+ L F QM PNEFTLS+ I
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
KA+ G Q+HG C+K GF+ N VG++++D+Y++ G +++A +FD + +++ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFL 240
+WNA+IAG+ ++K L LF+ M G P F++ S AC S G + G +H ++
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 241 ITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAE 300
I SG + +L+D Y K G + +AR++FD + ++ V+SW+SL+ YAQ E
Sbjct: 289 IKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKE 346
Query: 301 AMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SI 358
A+ F ++R ++ + S++ + L+++G H Y G+ + ++
Sbjct: 347 AVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG--WHYYELMKKDGIVPEAWHYVTV 404
Query: 359 VDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
VD+ + G ++ A EMP++ W ++ H +G + + +++PD
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPD 462
Query: 418 GVAYLAVLSACSHSG 432
+L SG
Sbjct: 463 DPGPHVILYNIYASG 477
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/643 (37%), Positives = 370/643 (57%), Gaps = 17/643 (2%)
Query: 62 EMNGACAVFDKMLER-NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
E +F++ +++ +V SW +++ ++G++ L F M S+ P + I
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 121 KASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI 180
KA L + +G Q H G++ + V +++I MYS CG++ +A ++FD +P ++++
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 181 TWNAMIAGYVLAGYSDKGLLLFRKM------QEHGEIPDEFTFTSTLKACGSLGSVGGGT 234
+W +MI GY L G + + LF+ + + D S + AC + + G
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 235 QIHGFLITSGFPYSVKTVIAGSLVDFYVKCG--CLVEARRVFDLIEQKSVISWSSLILGY 292
IH F+I GF V + +L+D Y K G + AR++FD I K +S++S++ Y
Sbjct: 204 SIHSFVIKRGFDRGVS--VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 293 AQEENLAEAMELFRQL-RERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD 351
AQ EA E+FR+L + + + + LS+++ + + GK IH ++ D
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321
Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLL 411
V SI+DMY KCG ++ A + F+ M KNV +WT +I GYG HG A +A+ LF M+
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 412 DDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLD 471
V P+ + +++VL+ACSH+GL E +F+ + ++P +EHY C+VD LGRAG L
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 472 EAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHA 531
+A +LI+ M +KP IW +LL+ACR+H ++EL L LD N Y+++S+I+A
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 532 DAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEK 591
DAG W + ER+R + +++GL K G S +E++ E+H F GD+ HP EKI++ L E+ +
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 592 RMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNL 651
++ E G+V HD+ EE KE +LRVHSEKLAI G +N PG + V KNL
Sbjct: 562 KLLEA-GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF----GIMNTVPGSTVNVVKNL 616
Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
RVC DCH IK +SKI+ FVVRDA RFH F+ G CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 211/407 (51%), Gaps = 23/407 (5%)
Query: 6 FSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG 65
SL R +++ CS + G Q H G+ D+ +++ LI MY+ CG++
Sbjct: 70 LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED 129
Query: 66 ACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGV 125
A VFD++ +RN+VSWT+++ G+ NGNA +SLF + V N+ + + + G+
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGL 186
Query: 126 LSSVE-------NGM--QIHGMCMKSGFEWNPVVGNSIIDMYSKCGR--INEAARMFDVM 174
+S + G+ IH +K GF+ VGN+++D Y+K G + A ++FD +
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 175 PAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGG 233
K +++N++++ Y +G S++ +FR++ ++ + + T ++ L A G++ G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 234 TQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYA 293
IH +I G V ++ S++D Y KCG + AR+ FD ++ K+V SW+++I GY
Sbjct: 307 KCIHDQVIRMGLEDDV--IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 294 QEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL-VEQGKQIHAYAAK--VPSGL 350
+ A+A+ELF + + ++ + S++ + L VE + +A + V GL
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKH 396
+ +VD+ + G + +A +L M +K + + W+ ++ H
Sbjct: 425 EH--YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/689 (36%), Positives = 378/689 (54%), Gaps = 20/689 (2%)
Query: 16 ADSLRCCSKNLL----LDYGVQLHGALVK-MGFSFDLMLNNDLIDMYAKCGEMNGACAVF 70
AD+L KN + + G +H +VK + L N LI+MY+K A V
Sbjct: 6 ADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 71 DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVE 130
RNVVSWT+L+ G QNG+ L F +M V PN+FT KA L
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYV 190
G QIH + +K G + VG S DMY K ++A ++FD +P ++L TWNA I+ V
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 191 LAGYSDKGL---LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
G + + + FR++ H P+ TF + L AC + G Q+HG ++ SGF
Sbjct: 186 TDGRPREAIEAFIEFRRIDGH---PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
V + L+DFY KC + + +F + K+ +SW SL+ Y Q +A L+ +
Sbjct: 243 DVS--VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
R+ ++ F++SS++ A A +E G+ IHA+A K V +++VDMY KCG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDV--EPDGVAYLAVL 425
I+++ + F+EMP KN+VT +I GY G A+ LF +M P+ + ++++L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
SACS +G VE + F + + ++P EHYSCIVD LGRAG ++ A I+ MP++P+
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
I++W L +ACR+HG +LG E L +LD + N+V++SN A AG W E +R+
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
+ G+KK AG SW+ V ++H F D +H L ++I L ++ M E G+ +K
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM-EAAGYKPDLKL 599
Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
+L+D++EE K + HSEKLA+ L+ L+ IR+ KNLR+CGDCH F K +S
Sbjct: 600 SLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP----IRITKNLRICGDCHSFFKFVS 655
Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
+K +VRD RFHRF+ G+CSC DYW
Sbjct: 656 GSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
++ L C+ L+ G +H VK + + + L+DMY KCG + + FD+M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSV--KPNEFTLSTNIKASGVLSSVENG 132
E+N+V+ +L+ G+ G L+LF +M PN T + + A +VENG
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 133 MQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMPAKSLIT-WNAMIAGY 189
M+I M+S + P + I+DM + G + A MP + I+ W A+
Sbjct: 433 MKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 190 VLAGYSDKGLL 200
+ G GLL
Sbjct: 492 RMHGKPQLGLL 502
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/698 (34%), Positives = 377/698 (54%), Gaps = 44/698 (6%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
QLH ++ S + +I +Y ++ A +F + V++W +++ F
Sbjct: 26 QLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
L+ F +M +S P+ + +K+ ++ + G +HG ++ G + + GN
Sbjct: 85 LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144
Query: 153 SIIDMYSK---------CGR---------------------------INEAARMFDVMPA 176
++++MY+K G I+ R+F+VMP
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204
Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQI 236
K ++++N +IAGY +G + L + R+M PD FT +S L V G +I
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 237 HGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEE 296
HG++I G V I SLVD Y K + ++ RVF + + ISW+SL+ GY Q
Sbjct: 265 HGYVIRKGIDSDV--YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 297 NLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN 356
EA+ LFRQ+ ++ SS++ A A + GKQ+H Y + G + +++
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 357 SIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEP 416
++VDMY KCG I A ++F+ M V + V+WT II G+ HG EAV LF +M V+P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 417 DGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNL 476
+ VA++AVL+ACSH GLV+E+ YF+ + + +EHY+ + D LGRAG+L+EA N
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 477 IESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSW 536
I M V+P+ ++W TLLS+C VH +LEL +V E + +D +N YV+M N++A G W
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRW 562
Query: 537 NECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEE 596
E +LR R KGL+K SW+E+ + H F GD +HP +KI++ L + ++M++E
Sbjct: 563 KEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Query: 597 LGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
G+V LHD+ EE K E L HSE+LA+ ++ N +PG IRV KN+R+C D
Sbjct: 623 -GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII----NTEPGTTIRVTKNIRICTD 677
Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
CH IK +SKI + +VRD +RFH F G CSCGDYW
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 234/457 (51%), Gaps = 43/457 (9%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACA---VFDKMLE 75
L+ C+ + L +G +HG +V++G DL N L++MYAK M + VFD+M +
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ 171
Query: 76 R---------------------------------NVVSWTALMCGFLQNGNAKACLSLFC 102
R +VVS+ ++ G+ Q+G + L +
Sbjct: 172 RTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
+MG++ +KP+ FTLS+ + V G +IHG ++ G + + +G+S++DMY+K
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291
Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLK 222
RI ++ R+F + + I+WN+++AGYV G ++ L LFR+M P F+S +
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
Query: 223 ACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSV 282
AC L ++ G Q+HG+++ GF ++ IA +LVD Y KCG + AR++FD +
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNI--FIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 283 ISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAY 342
+SW+++I+G+A + EA+ LF +++ + ++ + +++ + LV++
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 343 AAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVKNV-VTWTVIITGYGKHGLA 399
KV GL+ + + ++ D+ + G ++EA ++M V+ W+ +++ H
Sbjct: 470 MTKV-YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528
Query: 400 KEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEE 436
+ A + K+ D E G AY+ + + + +G +E
Sbjct: 529 ELAEKVAEKIFTVDSENMG-AYVLMCNMYASNGRWKE 564
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 199/421 (47%), Gaps = 41/421 (9%)
Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
+ T IK + S Q+H +++ + + +I +Y+ ++EA +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
+ ++ W ++I + K L F +M+ G PD F S LK+C + + G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKC------------------------------- 264
+HGF++ G + T +L++ Y K
Sbjct: 127 VHGFIVRLGMDCDLYT--GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 265 GCLV-----EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFV 319
C++ RRVF+++ +K V+S++++I GYAQ +A+ + R++ L+ D F
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 320 LSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMP 379
LSS++ +F+++ V +GK+IH Y + D + +S+VDMY K I+++ +F+ +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 380 VKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQE 439
++ ++W ++ GY ++G EA+ LFR+M+ V+P VA+ +V+ AC+H + ++
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 440 YFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVH 499
+ I S +VD + G + A+ + + M V ++ W ++ +H
Sbjct: 365 LHGYVLRGG-FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALH 422
Query: 500 G 500
G
Sbjct: 423 G 423
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/665 (36%), Positives = 387/665 (58%), Gaps = 15/665 (2%)
Query: 32 VQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQN 91
+Q H ++K GF ++ + L+D KCG+++ A VFD M ER++V+W +L+ +++
Sbjct: 87 IQAH--MLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 92 GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE-WNPVV 150
+K + ++ M +++V P+E+TLS+ KA LS + + HG+ + G E N V
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
G++++DMY K G+ EA + D + K ++ A+I GY G + + F+ M
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
P+E+T+ S L +CG+L +G G IHG ++ SGF ++ + SL+ Y++C + ++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS--QTSLLTMYLRCSLVDDS 321
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
RVF IE + +SW+SLI G Q A+ FR++ S++ + F LSS + ++
Sbjct: 322 LRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNL 381
Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVII 390
A+ E+G+QIH K D + ++D+Y KCG D A +F+ + +V++ +I
Sbjct: 382 AMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMI 441
Query: 391 TGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRM 450
Y ++G +EA+ LF +M+ ++P+ V L+VL AC++S LVEE E F DK M
Sbjct: 442 YSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIM 501
Query: 451 KPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGE 510
+HY+C+VD LGRAGRL+EA+ L + + P + +W+TLLSAC+VH +E+ +
Sbjct: 502 LTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITR 559
Query: 511 ILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFY 570
+L ++ + ++MSN++A G WN ++ + LKK SWVE++KE H F
Sbjct: 560 KILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFM 619
Query: 571 GGD-DTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIG 629
GD +HP +E+I + L E+ K+ K +LG+V D++E +KE SL HSEKLAI
Sbjct: 620 AGDLFSHPNSEQILENLEELIKKSK-DLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIA 678
Query: 630 LALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCS 689
A+ R G IR+ KNLRVC DCH +IK +S+++K + RD+ RFH F G CS
Sbjct: 679 FAVWR-----NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCS 733
Query: 690 CGDYW 694
CGDYW
Sbjct: 734 CGDYW 738
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G +HG +VK GF L L+ MY +C ++ + VF + N VSWT+L+ G +Q
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQ 345
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
NG + L F +M S+KPN FTLS+ ++ L+ E G QIHG+ K GF+ +
Sbjct: 346 NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA 405
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
G+ +ID+Y KCG + A +FD + +I+ N MI Y G+ + L LF +M G
Sbjct: 406 GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL 465
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
P++ T S L AC + V G ++ + +VD + G L EA
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY--ACMVDLLGRAGRLEEA 523
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
+ + ++ W +L+ + A + R++ E
Sbjct: 524 EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE 563
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
L+ +LR CS + + G Q+HG + K GF D + LID+Y KCG + A VFD +
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
E +V+S ++ + QNG + L LF +M + ++PN+ T+ + + A VE G +
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCE 490
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAG 188
+ K ++D+ + GR+ EA + + L+ W +++
Sbjct: 491 LFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/697 (35%), Positives = 380/697 (54%), Gaps = 43/697 (6%)
Query: 34 LHGALVKMGFSFDLMLNNDLIDMYAKCGEMNG---ACAVFDKMLERNVVSWTALMCGFLQ 90
+H ++K+G + LI+ G A +VF + E N++ W + G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
+ + + L L+ M S + PN +T +K+ + + G QIHG +K G + + V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 151 GNSIIDMYSKCGR-------------------------------INEAARMFDVMPAKSL 179
S+I MY + GR I A ++FD +P K +
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 180 ITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGF 239
++WNAMI+GY G + L LF+ M + PDE T + + AC GS+ G Q+H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 240 LITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLA 299
+ GF ++K I +L+D Y KCG L A +F+ + K VISW++LI GY
Sbjct: 292 IDDHGFGSNLK--IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLD--TSVSNS 357
EA+ LF+++ + + S++ A ++ G+ IH Y K G+ +S+ S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
++DMY KCG I+ A ++FN + K++ +W +I G+ HG A + LF +M ++PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
+ ++ +LSACSHSG+++ + F + D +M P++EHY C++D LG +G EA+ +I
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
M ++P IW +LL AC++HG++ELG E L++++ +NP +YV++SNI+A AG WN
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
E + R L KG+KKV G S +E+D +H F GD HP +I+ +L EME + E+
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL-EKA 648
Query: 598 GFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDC 657
GFV L +++EE KE +LR HSEKLAI L+ + +PG + + KNLRVC +C
Sbjct: 649 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI----STKPGTKLTIVKNLRVCRNC 704
Query: 658 HEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
HE K +SKI K + RD TRFH F GVCSC DYW
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 228/500 (45%), Gaps = 66/500 (13%)
Query: 4 VSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM 63
+S L+ L+ C+K+ G Q+HG ++K+G DL ++ LI MY + G +
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 64 NGACAVFDKMLERNVVS-------------------------------WTALMCGFLQNG 92
A VFDK R+VVS W A++ G+ + G
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 245
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
N K L LF M ++V+P+E T+ T + A S+E G Q+H GF N + N
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305
Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
++ID+YSKCG + A +F+ +P K +I+WN +I GY + LLLF++M GE P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
++ T S L AC LG++ G IH ++ + + + SL+D Y KCG + A +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
VF+ I KS+ SW+++I G+A + +LF ++R+ +Q D ++ + +
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
++ G+ I T+ + P + + +I
Sbjct: 486 LDLGRHI----------------------------FRTMTQDYKMTP--KLEHYGCMIDL 515
Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
G GL KEA + + ++EPDGV + ++L AC G VE + + L + P
Sbjct: 516 LGHSGLFKEAE---EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 572
Query: 453 RIEHYSCIVDSLGRAGRLDE 472
Y + + AGR +E
Sbjct: 573 --GSYVLLSNIYASAGRWNE 590
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/670 (35%), Positives = 381/670 (56%), Gaps = 14/670 (2%)
Query: 28 LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
L+ G ++H ++K+GF D+ + N LI +Y K G A VF++M ER++VSW +++ G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
+L G+ + L LF +M KP+ F+ + + A + S + G +IH ++S E
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 148 PV-VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
V V SI+DMYSK G ++ A R+F+ M ++++ WN MI Y G L F+KM
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 207 E-HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKC 264
E +G PD T + L A L G IHG+ + GF P+ V+ +L+D Y +C
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPH---MVLETALIDMYGEC 378
Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
G L A +FD + +K+VISW+S+I Y Q A+ELF++L + SL D ++S++
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
+A+ + +G++IHAY K +T + NS+V MY CG +++A + FN + +K+VV
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
+W II Y HG + +V LF +M+ V P+ + ++L+ACS SG+V+E EYF +
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
+ + P IEHY C++D +GR G AK +E MP P+ IW +LL+A R H D+ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 505 GREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDK 564
E + +++ DN YV++ N++A+AG W + R++ L SKG+ + + RS VE
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKG 678
Query: 565 EIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSE 624
+ H F GD +H T KI++VL + + + EE +V+ V + +S+ S R HS
Sbjct: 679 KSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSV 738
Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
+LA L+ + + G+ + V N R+C CHEF++ S++ + VV D+ FH F
Sbjct: 739 RLATCFGLI----STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFS 794
Query: 685 GGVCSCGDYW 694
G CSCG+YW
Sbjct: 795 NGRCSCGNYW 804
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 256/502 (50%), Gaps = 21/502 (4%)
Query: 9 VSERQRLADSLRCCSKNLLLDYGVQLHGALV-KMGFSFDLMLNNDLIDM----YAKCGEM 63
VS R ++NL D G+ LV + + +N+ + +A M
Sbjct: 21 VSSENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLM 80
Query: 64 NGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKAS 123
A +FD+M + + W ++ GF G + + +M + VK + FT IK+
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 124 GVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWN 183
+SS+E G +IH M +K GF + V NS+I +Y K G +A ++F+ MP + +++WN
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
+MI+GY+ G L+LF++M + G PD F+ S L AC + S G +IH + S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 244 GFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAME 303
+ ++ S++D Y K G + A R+F+ + Q+++++W+ +I YA+ + +A
Sbjct: 261 RIE-TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 304 LFRQLRERS-LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMY 362
F+++ E++ LQ D V++S+ + A L +G+ IH YA + + +++DMY
Sbjct: 320 CFQKMSEQNGLQPD--VITSINLLPASAIL--EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 363 LKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYL 422
+CG + A +F+ M KNV++W II Y ++G A+ LF+++ + PD
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 423 AVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSL----GRAGRLDEAKNLIE 478
++L A + S + E +E + + +K R + I++SL G L++A+
Sbjct: 436 SILPAYAESLSLSEGREIHAYI-----VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 479 SMPVKPSIAIWQTLLSACRVHG 500
+ +K ++ W +++ A VHG
Sbjct: 491 HILLKDVVS-WNSIIMAYAVHG 511
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 7 SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
SLV + +A L +++L L G ++H +VK + + ++ N L+ MYA CG++ A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 67 CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
F+ +L ++VVSW +++ + +G + + LF +M +S V PN+ T ++ + A +
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVMP 175
V+ G + + MK + +P + + ++D+ + G + A R + MP
Sbjct: 546 GMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/648 (36%), Positives = 368/648 (56%), Gaps = 31/648 (4%)
Query: 51 NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
N ++ YA+ G ++ A +VFD+M E+N VSW AL+ ++QN + LF +
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF------KSR 214
Query: 111 PNEFTLSTNIKASGVLSS---VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
N +S N G + VE M ++ WN +II Y++ G+I+EA
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN-----TIITGYAQSGKIDEA 269
Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
++FD P + + TW AM++GY+ ++ LF KM E E+ ++ + L
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV----SWNAMLA----- 320
Query: 228 GSVGGGTQIHGFLITSGFP-YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWS 286
G V G + P +V T +++ Y +CG + EA+ +FD + ++ +SW+
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 287 SLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKV 346
++I GY+Q + EA+ LF Q+ +++ SS + AD +E GKQ+H K
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 347 PSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLF 406
V N+++ MY KCG I+EA +LF EM K++V+W +I GY +HG + A+ F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 407 RKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
M + ++PD +AVLSACSH+GLV++ ++YF + D + P +HY+C+VD LGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
AG L++A NL+++MP +P AIW TLL A RVHG+ EL + + ++ +N YV++
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVL 586
SN++A +G W + +LR R KG+KKV G SW+E+ + H F GD+ HP ++I L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 587 MEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIR 646
E++ RMK + G+V LHD++EE KE +R HSE+LA+ ++R G+ IR
Sbjct: 679 EELDLRMK-KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR----VSSGRPIR 733
Query: 647 VFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
V KNLRVC DCH IK +++I + ++RD RFH F+ G CSCGDYW
Sbjct: 734 VIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 24/388 (6%)
Query: 46 DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
D++ N +I YA+ G+++ A +FD+ ++V +WTA++ G++QN + LF +M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM- 307
Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV----VGNSIIDMYSKC 161
P +S N +G + M K F+ P N++I Y++C
Sbjct: 308 -----PERNEVSWNAMLAGYVQGERMEMA------KELFDVMPCRNVSTWNTMITGYAQC 356
Query: 162 GRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTL 221
G+I+EA +FD MP + ++W AMIAGY +G+S + L LF +M+ G + +F+S L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
C + ++ G Q+HG L+ G Y + +L+ Y KCG + EA +F + K
Sbjct: 417 STCADVVALELGKQLHGRLVKGG--YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
++SW+++I GY++ A+ F ++ L+ D + +++ + LV++G+Q +
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ-YF 533
Query: 342 YAAKVPSGL--DTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGL 398
Y G+ ++ +VD+ + GL+++A L MP + + W ++ HG
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 399 AKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
+ A K+ +EP+ +LS
Sbjct: 594 TELAETAADKIFA--MEPENSGMYVLLS 619
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 176/351 (50%), Gaps = 35/351 (9%)
Query: 145 EWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRK 204
EWN + + Y + GR NEA R+F MP S +++N MI+GY+ G + LF +
Sbjct: 66 EWNVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 205 MQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKC 264
M E D ++ +K ++G ++ + S T+++G Y +
Sbjct: 121 MPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC-SWNTMLSG-----YAQN 170
Query: 265 GCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMM 324
GC+ +AR VFD + +K+ +SW++L+ Y Q + EA LF+ +L + ++
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLL 226
Query: 325 GVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVV 384
G F + + +Q + D N+I+ Y + G IDEA +LF+E PV++V
Sbjct: 227 GGFVKKKKIVEARQFF----DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 385 TWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRL 444
TWT +++GY ++ + +EA LF KM E + V++ A+L+ +E ++E F +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 445 -CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
C + + ++ ++ + G++ EAKNL + MP + ++ W +++
Sbjct: 339 PCRN------VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIA 382
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 1 MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
+NR SFS +L C+ + L+ G QLHG LVK G+ + N L+ MY KC
Sbjct: 407 LNRSSFS---------SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 61 GEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI 120
G + A +F +M +++VSW ++ G+ ++G + L F M +KP++ T+ +
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 121 KASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
A V+ G Q + M G N ++D+ + G + +A + MP
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 382/698 (54%), Gaps = 43/698 (6%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYA--KCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
Q HG +++ G D + L M A + A VFD++ + N +W L+ +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 91 NGNAKACLSLFCQMGS-SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
+ + F M S S PN++T IKA+ +SS+ G +HGM +KS +
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHG 209
V NS+I Y CG ++ A ++F + K +++WN+MI G+V G DK L LF+KM+
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 210 EIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVE 269
T L AC + ++ G Q+ ++ + +V +A +++D Y KCG + +
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRV--NVNLTLANAMLDMYTKCGSIED 285
Query: 270 ARRVFDLIE-------------------------------QKSVISWSSLILGYAQEENL 298
A+R+FD +E QK +++W++LI Y Q
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 299 AEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNS 357
EA+ +F +L+ +++++++ L S + A +E G+ IH+Y K ++ V+++
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
++ MY KCG ++++ E+FN + ++V W+ +I G HG EAV +F KM +V+P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
GV + V ACSH+GLV+E++ F ++ ++ + P +HY+CIVD LGR+G L++A I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWN 537
E+MP+ PS ++W LL AC++H +L L LL L+ N +V++SNI+A G W
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 538 ECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEEL 597
LRK R GLKK G S +E+D IH F GD+ HP++EK++ L E+ +++K
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN- 644
Query: 598 GFVYGVKYALHDIQEES-KEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGD 656
G+ + L I+EE KE+SL +HSEKLAI L+ E P KVIRV KNLRVCGD
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS---TEAP-KVIRVIKNLRVCGD 700
Query: 657 CHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
CH K +S++ +VRD RFH F G CSC D+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 195/389 (50%), Gaps = 41/389 (10%)
Query: 28 LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
L G LHG VK D+ + N LI Y CG+++ AC VF + E++VVSW +++ G
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWN 147
F+Q G+ L LF +M S VK + T+ + A + ++E G Q+ ++ N
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 148 PVVGNSIIDMYSKCGRINEAARMFDV-------------------------------MPA 176
+ N+++DMY+KCG I +A R+FD MP
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 177 KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP-DEFTFTSTLKACGSLGSVGGGTQ 235
K ++ WNA+I+ Y G ++ L++F ++Q + ++ T STL AC +G++ G
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
IH ++ G + + +L+ Y KCG L ++R VF+ +E++ V WS++I G A
Sbjct: 387 IHSYIKKHGIRMNFH--VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGK----QIHAYAAKVPSGLD 351
EA+++F +++E +++ +G +++ + LV++ + Q+ + VP
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 352 TSVSNSIVDMYLKCGLIDEATELFNEMPV 380
+ IVD+ + G +++A + MP+
Sbjct: 505 YAC---IVDVLGRSGYLEKAVKFIEAMPI 530
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 197/410 (48%), Gaps = 20/410 (4%)
Query: 111 PNEFTLSTNIKASGVLSSVENGM------QIHGMCMKSGFEWNPVVGNSIIDM--YSKCG 162
PN+ T TN + S +S +E + Q HG +++G +P + + M S
Sbjct: 21 PNQPT--TNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE-IPDEFTFTSTL 221
+ A ++FD +P + WN +I Y + F M + P+++TF +
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 222 KACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKS 281
KA + S+ G +HG + S V +A SL+ Y CG L A +VF I++K
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDV--FVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 282 VISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHA 341
V+SW+S+I G+ Q+ + +A+ELF+++ ++ + ++ A +E G+Q+ +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 342 YAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKE 401
Y + ++ +++N+++DMY KCG I++A LF+ M K+ VTWT ++ GY E
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA----ISE 312
Query: 402 AVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIV 461
R++L + D VA+ A++SA +G E+ F L K MK +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 462 DSLGRAGRLDEAK---NLIESMPVKPSIAIWQTLLSACRVHGDLELGREV 508
+ + G L+ + + I+ ++ + + L+ GDLE REV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE--- 75
L C+K L++G Q+ + + + +L L N ++DMY KCG + A +FD M E
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 76 ----------------------------RNVVSWTALMCGFLQNGNAKACLSLFCQMG-S 106
+++V+W AL+ + QNG L +F ++
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
++K N+ TL + + A + ++E G IH K G N V +++I MYSKCG + +
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
+ +F+ + + + W+AMI G + G ++ + +F KMQE P+ TFT+ AC
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 227 LGSV 230
G V
Sbjct: 479 TGLV 482
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
L +L C++ L+ G +H + K G + + + LI MY+KCG++ + VF+ +
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNI----KASGVLSSVE 130
+R+V W+A++ G +G + +F +M ++VKPN T TN+ +G++ E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF-TNVFCACSHTGLVDEAE 486
Query: 131 NGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAG 188
+ H M G I+D+ + G + +A + + MP S W A++
Sbjct: 487 S--LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/624 (36%), Positives = 366/624 (58%), Gaps = 21/624 (3%)
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
+S L+ + G K + + Q S P++ T I G SS+ + +++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+ +G + +P + +I MYS G ++ A ++FD +++ WNA+ LAG+ ++
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKAC----GSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
L L+ KM G D FT+T LKAC ++ + G +IH L G YS I
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG--YSSHVYIM 220
Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQL-RE-RS 312
+LVD Y + GC+ A VF + ++V+SWS++I YA+ EA+ FR++ RE +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDE 370
+ + S++ A A +EQGK IH Y + GLD+ V +++V MY +CG ++
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILR--RGLDSILPVISALVTMYGRCGKLEV 338
Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
+F+ M ++VV+W +I+ YG HG K+A+ +F +ML + P V +++VL ACSH
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
GLVEE + F + D +KP+IEHY+C+VD LGRA RLDEA +++ M +P +W
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
+LL +CR+HG++EL L L+ N NYV++++I+A+A W+E +R++KL +G
Sbjct: 459 SLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG 518
Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
L+K+ GR W+EV ++++ F D+ +PL E+IH L+++ + MKE+ G++ K L+++
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEK-GYIPQTKGVLYEL 577
Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
+ E KE + HSEKLA+ L+ N G+ IR+ KNLR+C DCH F K +SK ++
Sbjct: 578 ETEEKERIVLGHSEKLALAFGLI----NTSKGEPIRITKNLRLCEDCHLFTKFISKFMEK 633
Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
+VRD RFHRF+ GVCSCGDYW
Sbjct: 634 EILVRDVNRFHRFKNGVCSCGDYW 657
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 186/366 (50%), Gaps = 11/366 (3%)
Query: 21 CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
CC L +++H ++ G D L LI MY+ G ++ A VFDK +R +
Sbjct: 86 CCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV 145
Query: 81 WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKA----SGVLSSVENGMQIH 136
W AL G+ + L L+ +M V+ + FT + +KA ++ + G +IH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
+ G+ + + +++DMY++ G ++ A+ +F MP +++++W+AMIA Y G +
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 197 KGLLLFRKM--QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA 254
+ L FR+M + P+ T S L+AC SL ++ G IHG+++ G S+ VI+
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD-SILPVIS 324
Query: 255 GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQ 314
+LV Y +CG L +RVFD + + V+SW+SLI Y +A+++F ++
Sbjct: 325 -ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGAS 383
Query: 315 VDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEAT 372
S++G + LVE+GK++ + G+ + + +VD+ + +DEA
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 373 ELFNEM 378
++ +M
Sbjct: 443 KMVQDM 448
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 143/273 (52%), Gaps = 9/273 (3%)
Query: 22 CSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSW 81
C+ N L+ G ++H L + G+S + + L+DMYA+ G ++ A VF M RNVVSW
Sbjct: 193 CTVNHLMK-GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSW 251
Query: 82 TALMCGFLQNGNAKACLSLFCQM--GSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMC 139
+A++ + +NG A L F +M + PN T+ + ++A L+++E G IHG
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 140 MKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGL 199
++ G + V ++++ MY +CG++ R+FD M + +++WN++I+ Y + GY K +
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 200 LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA--GSL 257
+F +M +G P TF S L AC G V G ++ T + +K I +
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL---FETMWRDHGIKPQIEHYACM 428
Query: 258 VDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
VD + L EA + V D+ + W SL+
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ C+ L+ G +HG +++ G L + + L+ MY +CG++ VFD+M +R+V
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HG 137
VSW +L+ + +G K + +F +M ++ P T + + A VE G ++
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFET 411
Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVM 174
M G + ++D+ + R++EAA+M M
Sbjct: 412 MWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/624 (36%), Positives = 345/624 (55%), Gaps = 39/624 (6%)
Query: 103 QMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCG 162
Q+ + KP T I+ ++E G ++H SGF V+ N ++ MY+KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 163 RINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI----------- 211
+ +A ++FD MP + L +WN M+ GY G ++ LF +M E
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 212 ---------------------PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVK 250
P+ FT + + A ++ + G +IHG ++ +G
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL--DSD 252
Query: 251 TVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRE 310
V+ SL+D Y KCGC+ EAR +FD I +K V+SW+S+I Y + E LF +L
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 311 RSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDE 370
+ + + + ++ AD E GKQ+H Y +V + S+S+VDMY KCG I+
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 371 ATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSH 430
A + + P ++V+WT +I G ++G EA+ F +L +PD V ++ VLSAC+H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 431 SGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQ 490
+GLVE+ E+F + R+ +HY+C+VD L R+GR ++ K++I MP+KPS +W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 491 TLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKG 550
++L C +G+++L E + L +++ +NPV YV M+NI+A AG W E ++RK + G
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 551 LKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDI 610
+ K G SW E+ ++ H F D +HP+ +I + L E+ K+MKEE G+V LHD+
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEE-GYVPATSLVLHDV 611
Query: 611 QEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKL 670
++E KEE+L HSEKLA+ A+ L+ + G I+VFKNLR C DCH IK +S I K
Sbjct: 612 EDEQKEENLVYHSEKLAVAFAI----LSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKR 667
Query: 671 VFVVRDATRFHRFEGGVCSCGDYW 694
VRD+TRFH FE G CSCGDYW
Sbjct: 668 KITVRDSTRFHCFENGQCSCGDYW 691
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 231/466 (49%), Gaps = 49/466 (10%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEM--------------- 63
++ CS+ L+ G ++H + GF +++ N L+ MYAKCG +
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 64 -------NGACAV---------FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGS- 106
NG V FD+M E++ SWTA++ G+++ + L L+ M
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 107 SSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINE 166
+ +PN FT+S + A+ + + G +IHG +++G + + V+ +S++DMY KCG I+E
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 167 AARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGS 226
A +FD + K +++W +MI Y + +G LF ++ E P+E+TF L AC
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 227 LGSVGGGTQIHGFLITSGF-PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
L + G Q+HG++ GF PYS + SLVD Y KCG + A+ V D + ++SW
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFAS---SSLVDMYTKCGNIESAKHVVDGCPKPDLVSW 388
Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQ-IHAYAA 344
+SLI G AQ EA++ F L + + D +++ LVE+G + ++
Sbjct: 389 TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITE 448
Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITG---YGKHGLAK 400
K + +VD+ + G ++ + +EMP+K + W ++ G YG LA+
Sbjct: 449 KHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAE 508
Query: 401 EAVG-LFRKMLLDDVEPDG-VAYLAVLSACSHSGLVEESQEYFSRL 444
EA LF+ +EP+ V Y+ + + + +G EE + R+
Sbjct: 509 EAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 3 RVSFSLVSE---------RQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDL 53
R FSL SE A L C+ + G Q+HG + ++GF ++ L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 54 IDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNE 113
+DMY KCG + A V D + ++VSWT+L+ G QNG L F + S KP+
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 114 FTLSTNIKASGVLSSVENGMQ-IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
T + A VE G++ + + K ++D+ ++ GR + +
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 173 VMPAK-SLITWNAMIAGYVLAGYSD 196
MP K S W +++ G G D
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNID 505
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 365/662 (55%), Gaps = 7/662 (1%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
Q+H +L+ D L N L+ + + +F N+ + +L+ GF+ N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
L LF + + + FT +KA SS + G+ +H + +K GF +
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
S++ +YS GR+N+A ++FD +P +S++TW A+ +GY +G + + LF+KM E G P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
D + L AC +G + G I ++ + + +LV+ Y KCG + +AR
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYM--EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
VFD + +K +++WS++I GYA E +ELF Q+ + +L+ D F + + A
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
++ G+ + + + ++N+++DMY KCG + E+F EM K++V I+G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
K+G K + +F + + PDG +L +L C H+GL+++ +F+ + +K
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
+EHY C+VD GRAG LD+A LI MP++P+ +W LLS CR+ D +L V + L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 513 LRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGG 572
+ L+ N NYV +SNI++ G W+E +R + KG+KK+ G SW+E++ ++H F
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 573 DDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLAL 632
D +HPL++KI+ L ++ M+ +GFV ++ D++EE KE L HSEKLA+ L L
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMR-LMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGL 627
Query: 633 VRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGD 692
+ + G+VIRV KNLRVCGDCHE +K +SKI + VVRD RFH F G CSC D
Sbjct: 628 I----STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683
Query: 693 YW 694
YW
Sbjct: 684 YW 685
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 195/377 (51%), Gaps = 6/377 (1%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ C++ G+ LH +VK GF+ D+ L+ +Y+ G +N A +FD++ +R+V
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
V+WTAL G+ +G + + LF +M VKP+ + + + A + +++G I
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+ + N V +++++Y+KCG++ +A +FD M K ++TW+ MI GY + +G
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+ LF +M + PD+F+ L +C SLG++ G G + + +A +L+
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALI 355
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
D Y KCG + VF +++K ++ ++ I G A+ ++ + +F Q + + DG
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
++ L++ G + A L +V + +VD++ + G++D+A L
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFN-AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 377 EMPVK-NVVTWTVIITG 392
+MP++ N + W +++G
Sbjct: 475 DMPMRPNAIVWGALLSG 491
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/569 (36%), Positives = 330/569 (57%), Gaps = 9/569 (1%)
Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
++ +G ++H +K+ + + ++ Y KC + +A ++ D MP K++++W AMI+
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 188 GYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPY 247
Y G+S + L +F +M P+EFTF + L +C +G G QIHG ++ + Y
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK--WNY 184
Query: 248 SVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQ 307
+ SL+D Y K G + EAR +F+ + ++ V+S +++I GYAQ EA+E+F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 308 LRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGL 367
L + + +S++ + AL++ GKQ H + + + NS++DMY KCG
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDD-VEPDGVAYLAVLS 426
+ A LF+ MP + ++W ++ GY KHGL +E + LFR M + V+PD V LAVLS
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 427 ACSHSGLVEESQEYFSRL-CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPS 485
CSH + + F + + KP EHY CIVD LGRAGR+DEA I+ MP KP+
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Query: 486 IAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKL 545
+ +LL ACRVH +++G VG L+ ++ +N NYV++SN++A AG W + +R +
Sbjct: 425 AGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAM 484
Query: 546 ARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKY 605
K + K GRSW++ ++ +H+F+ D THP E++ + E+ +MK+ G+V +
Sbjct: 485 MMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA-GYVPDLSC 543
Query: 606 ALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLS 665
L+D+ EE KE+ L HSEKLA+ L+ G G IRVFKNLR+C DCH F K S
Sbjct: 544 VLYDVDEEQKEKMLLGHSEKLALTFGLIATG----EGIPIRVFKNLRICVDCHNFAKIFS 599
Query: 666 KILKLVFVVRDATRFHRFEGGVCSCGDYW 694
K+ + +RD RFH+ G+CSCGDYW
Sbjct: 600 KVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 220/412 (53%), Gaps = 13/412 (3%)
Query: 21 CCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVS 80
C K L D G ++H ++K + L L+ Y KC + A V D+M E+NVVS
Sbjct: 62 CLDKRALRD-GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVS 120
Query: 81 WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCM 140
WTA++ + Q G++ L++F +M S KPNEFT +T + + S + G QIHG+ +
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 141 KSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLL 200
K ++ + VG+S++DMY+K G+I EA +F+ +P + +++ A+IAGY G ++ L
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 201 LFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDF 260
+F ++ G P+ T+ S L A L + G Q H ++ P+ V+ SL+D
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY--AVLQNSLIDM 298
Query: 261 YVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFV 319
Y KCG L ARR+FD + +++ ISW+++++GY++ E +ELFR +R E+ ++ D
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 320 LSSMMGVFADFALVEQGKQIH--AYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNE 377
L +++ + + + G I A + + T IVDM + G IDEA E
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 378 MPVKNVVTWTVIITGYGKHGLA---KEAVGLFRKMLLDDVEPDGVAYLAVLS 426
MP K + G + L+ E+VG R+++ ++EP+ +LS
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVG--RRLI--EIEPENAGNYVILS 466
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
Query: 15 LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKML 74
A L C + L G Q+HG +VK + + + + L+DMYAK G++ A +F+ +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 75 ERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQ 134
ER+VVS TA++ G+ Q G + L +F ++ S + PN T ++ + A L+ +++G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 135 IHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGY 194
H ++ + V+ NS+IDMYSKCG ++ A R+FD MP ++ I+WNAM+ GY G
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 195 SDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI 253
+ L LFR M++ + PD T + L C G I ++ + T
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 254 AGSLVDFYVKCGCLVEARRVFDLIEQ 279
G +VD + G + EA F+ I++
Sbjct: 396 YGCIVDMLGRAGRIDEA---FEFIKR 418
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 322 SMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK 381
+++ D + G+++HA+ K T + ++ Y KC +++A ++ +EMP K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 382 NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSAC---SHSGLVEESQ 438
NVV+WT +I+ Y + G + EA+ +F +M+ D +P+ + VL++C S GL ++
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 439 EYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRV 498
+ D I S ++D +AG++ EA+ + E +P + ++ +
Sbjct: 177 GLIVKWNYDS----HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG---- 228
Query: 499 HGDLELGREVGEILLRL--DGDNPVNYVMMSNIHA--------DAGSWNECERLRK 544
+ L L E E+ RL +G +P NYV +++ D G C LR+
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSP-NYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/686 (33%), Positives = 378/686 (55%), Gaps = 13/686 (1%)
Query: 14 RLADSLRCCSKNLLLDYGVQLHGALVKMGFSF---DLMLNNDLIDMYAKCGEMNGACAVF 70
RL + L+ C+ + L G +H L+ S D N LI++Y KC E A +F
Sbjct: 33 RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLF 92
Query: 71 DKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSV 129
D M ERNVVSW A+M G+ +G L LF M S +PNEF + K+ +
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
E G Q HG +K G + V N+++ MYS C EA R+ D +P L +++ ++GY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
+ G +GL + RK + + T+ S+L+ +L + Q+H ++ GF V
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
+ G+L++ Y KCG ++ A+RVFD +++ ++++ Y Q+++ EA+ LF ++
Sbjct: 273 EA--CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLID 369
+ + + + + ++ A+ +L++QG +H K V N++V+MY K G I+
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 370 EATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
+A + F+ M +++VTW +I+G HGL +EA+ F +M+ P+ + ++ VL ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 430 HSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIW 489
H G VE+ YF++L ++P I+HY+CIV L +AG +A++ + + P++ + W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 490 QTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSK 549
+TLL+AC V + LG++V E + ++ YV++SNIHA + W ++R L ++
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 550 GLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHD 609
G+KK G SW+ + + H F D+ HP I+ + E+ ++K LG+ V A HD
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK-PLGYSPDVAGAFHD 629
Query: 610 IQEESKEESLRVHSEKLAIGLALVRGGLNEQPGK-VIRVFKNLRVCGDCHEFIKGLSKIL 668
+ EE +E++L HSEKLA+ L++ P K + V KN+R+C DCH IK +SKI
Sbjct: 630 VDEEQREDNLSYHSEKLAVAYGLIK-----TPEKSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 669 KLVFVVRDATRFHRFEGGVCSCGDYW 694
K V+RD+ RFH F G CSC DYW
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDYW 710
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/643 (35%), Positives = 355/643 (55%), Gaps = 37/643 (5%)
Query: 53 LIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPN 112
L+ YA ++ A VFD++ ERNV+ ++ ++ NG + +F M +V+P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 113 EFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFD 172
+T +KA ++ G +IHG K G VGN ++ MY KCG ++EA + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 173 VMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGG 232
M + +++WN+++ GY D L + R+M+ D T S L A +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT----- 254
Query: 233 GTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGY 292
T Y + D + K G +KS++SW+ +I Y
Sbjct: 255 --------TTENVMY---------VKDMFFKMG-------------KKSLVSWNVMIGVY 284
Query: 293 AQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDT 352
+ EA+EL+ ++ + D ++S++ D + + GK+IH Y + +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 353 SVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLD 412
+ N+++DMY KCG +++A ++F M ++VV+WT +I+ YG G +AV LF K+
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 413 DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDE 472
+ PD +A++ L+ACSH+GL+EE + F + + ++ PR+EH +C+VD LGRAG++ E
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 473 AKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHAD 532
A I+ M ++P+ +W LL ACRVH D ++G + L +L + YV++SNI+A
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 533 AGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKR 592
AG W E +R + +SKGLKK G S VEV++ IH F GD +HP +++I++ L + K+
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKK 584
Query: 593 MKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQ-PGKVIRVFKNL 651
MK ELG+V + ALHD++EE KE L VHSEKLAI AL+ E+ IR+ KNL
Sbjct: 585 MK-ELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNL 643
Query: 652 RVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
R+CGDCH K +S+I ++RD RFH F GVCSCGDYW
Sbjct: 644 RICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 43/412 (10%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ CS + + G ++HG+ K+G S L + N L+ MY KCG ++ A V D+M R+V
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
VSW +L+ G+ QN L + +M S + + T+++ +L +V N + M
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS------LLPAVSNTTTENVM 260
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+K DM+ K G+ KSL++WN MI Y+ +
Sbjct: 261 YVK--------------DMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEA 293
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+ L+ +M+ G PD + TS L ACG ++ G +IHG++ ++ ++ +L+
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL--LLENALI 351
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
D Y KCGCL +AR VF+ ++ + V+SW+++I Y +A+ LF +L++ L D
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 319 VLSSMMGVFADFALVEQGK---QIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
+ + + L+E+G+ ++ K+ L+ +VD+ + G + EA
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRFI 469
Query: 376 NEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
+M ++ N W ++ H + +GL L + P+ Y +LS
Sbjct: 470 QDMSMEPNERVWGALLGACRVH--SDTDIGLLAADKLFQLAPEQSGYYVLLS 519
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/669 (34%), Positives = 358/669 (53%), Gaps = 17/669 (2%)
Query: 28 LDYGVQLHGALVKMGF-SFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMC 86
L +G LH + +MG + ++L N ++ MY +C + A +FD+M E N VS T ++
Sbjct: 99 LSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 87 GFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEW 146
+ + G + LF M +S KP +T +K+ +++ G QIH +++G
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS 217
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQ 206
N + I++MY KCG + A R+FD M K + ++ GY AG + L LF +
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 207 EHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGC 266
G D F F+ LKAC SL + G QIH + G V + LVDFY+KC
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS--VGTPLVDFYIKCSS 335
Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV-DGFVLSSMMG 325
A R F I + + +SWS++I GY Q EA++ F+ LR ++ + + F +S+
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
+ A G Q+HA A K ++++ MY KCG +D+A E+F M ++V
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
WT I+G+ +G A EA+ LF KM+ ++P+ V ++AVL+ACSH+GLVE+ + +
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
+ P I+HY C++D R+G LDEA +++MP +P W+ LS C H +LELG
Sbjct: 516 RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 575
Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
GE L +LD ++ YV+ N++ AG W E + KL + LKK SW++ +
Sbjct: 576 EIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGK 635
Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEK 625
IH F GD HP T++I++ ++KE GF+ G + + + + E L HSE+
Sbjct: 636 IHRFIVGDKHHPQTQEIYE-------KLKEFDGFMEGDMFQCNMTE---RREQLLDHSER 685
Query: 626 LAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEG 685
LAI L+ ++ I+VFKNLR C DCHEF K +S + V+RD+ RFH F+
Sbjct: 686 LAIAFGLI--SVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKE 743
Query: 686 GVCSCGDYW 694
G CSC DYW
Sbjct: 744 GKCSCNDYW 752
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 12/309 (3%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ C+ L+ G Q+H + K+G ++ + L+D Y KC AC F ++ E N
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP-NEFTLSTNIKASGVLSSVENGMQIHG 137
VSW+A++ G+ Q + + F + S + N FT ++ +A VL+ G Q+H
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 138 MCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDK 197
+K + +++I MYSKCG +++A +F+ M ++ W A I+G+ G + +
Sbjct: 412 DAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 198 GLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVI--AG 255
L LF KM G P+ TF + L AC G V G L T Y+V I
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHC---LDTMLRKYNVAPTIDHYD 528
Query: 256 SLVDFYVKCGCLVEARRVF-DLIEQKSVISWSSLILGYAQEENLAE---AMELFRQLRER 311
++D Y + G L EA + ++ + +SW + G +NL A E RQL
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 312 SLQVDGFVL 320
G+VL
Sbjct: 589 --DTAGYVL 595
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 329/559 (58%), Gaps = 7/559 (1%)
Query: 136 HGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYS 195
HG ++ E + + N +I+ YSKCG + A ++FD M +SL++WN MI Y
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 196 DKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAG 255
+ L +F +M+ G EFT +S L ACG ++H + + ++ +
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL--YVGT 201
Query: 256 SLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQV 315
+L+D Y KCG + +A +VF+ ++ KS ++WSS++ GY Q +N EA+ L+R+ + SL+
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 316 DGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELF 375
+ F LSS++ ++ A + +GKQ+HA K G + V++S VDMY KCG + E+ +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 376 NEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE 435
+E+ KN+ W II+G+ KH KE + LF KM D + P+ V + ++LS C H+GLVE
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 436 ESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSA 495
E + +F + + P + HYSC+VD LGRAG L EA LI+S+P P+ +IW +LL++
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Query: 496 CRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVA 555
CRV+ +LEL E L L+ +N N+V++SNI+A W E + RKL R +KKV
Sbjct: 442 CRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVR 501
Query: 556 GRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESK 615
G+SW+++ ++H F G+ HP +I L + + + + G+ V++ LHD++ K
Sbjct: 502 GKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR-KFGYKPSVEHELHDVEIGKK 560
Query: 616 EESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVR 675
EE L HSEK LALV G + +R+ KNLR+C DCHEF+K S + +VR
Sbjct: 561 EELLMQHSEK----LALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVR 616
Query: 676 DATRFHRFEGGVCSCGDYW 694
D RFH F G CSCGD+W
Sbjct: 617 DVNRFHHFSDGHCSCGDFW 635
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 211/372 (56%), Gaps = 5/372 (1%)
Query: 10 SERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAV 69
S R + + L+ C++N + HG ++++ D+ L N LI+ Y+KCG + A V
Sbjct: 59 SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118
Query: 70 FDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSV 129
FD MLER++VSW ++ + +N L +F +M + K +EFT+S+ + A GV
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178
Query: 130 ENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGY 189
++H + +K+ + N VG +++D+Y+KCG I +A ++F+ M KS +TW++M+AGY
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 190 VLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSV 249
V ++ LLL+R+ Q ++FT +S + AC +L ++ G Q+H + SGF +V
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298
Query: 250 KTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLR 309
+A S VD Y KCG L E+ +F +++K++ W+++I G+A+ E M LF +++
Sbjct: 299 --FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 310 ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGL 367
+ + + SS++ V LVE+G++ + GL +V + +VD+ + GL
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 368 IDEATELFNEMP 379
+ EA EL +P
Sbjct: 416 LSEAYELIKSIP 427
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 7 SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
SL + L+ + CS L G Q+H + K GF ++ + + +DMYAKCG + +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 67 CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
+F ++ E+N+ W ++ GF ++ K + LF +M + PNE T S+ + G
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 127 SSVENGMQIHGMCMKS-GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT-WNA 184
VE G + + + G N V + ++D+ + G ++EA + +P + W +
Sbjct: 378 GLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGS 437
Query: 185 MIAG 188
++A
Sbjct: 438 LLAS 441
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 246 PYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELF 305
P + I G V+F ++C L L SV++ Y QEE
Sbjct: 4 PSLPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLA------SYDQEE--VSPGRYS 55
Query: 306 RQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKC 365
+ R+L + ++ + A V + K H ++ D ++ N +++ Y KC
Sbjct: 56 NEFSNRNL------VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC 109
Query: 366 GLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVL 425
G ++ A ++F+ M +++V+W +I Y ++ + EA+ +F +M + + +VL
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 169
Query: 426 SACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPVK 483
SAC G+ ++ E C + + Y + ++D + G + +A + ESM K
Sbjct: 170 SAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 484 PSIAIWQTLLS 494
S+ W ++++
Sbjct: 227 SSVT-WSSMVA 236
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 341/603 (56%), Gaps = 44/603 (7%)
Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIA 187
++ +H +K G + N+++++Y KCG + A ++FD MP + I W +++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLT 77
Query: 188 GYVLAGYSDKGLLLFRKMQEHGEI-PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFP 246
A S K L +F + + PD+F F++ +KAC +LGS+ G Q+H I S
Sbjct: 78 ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS--E 135
Query: 247 YSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFR 306
Y+ V+ SLVD Y KCG L A+ VFD I K+ ISW++++ GYA+ EA+ELFR
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 307 QL--------------------------------RERSLQVDGFVLSSMMGVFADFALVE 334
L RER +D VLSS++G A+ A
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 335 QGKQIHAYAAKVPSGLDTSV--SNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITG 392
G+Q+H + G D+ V SN+++DMY KC + A ++F+ M ++VV+WT +I G
Sbjct: 256 AGRQVHGLV--IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 393 YGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKP 452
+HG A++A+ L+ M+ V+P+ V ++ ++ ACSH G VE+ +E F + D ++P
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 453 RIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEIL 512
++HY+C++D LGR+G LDEA+NLI +MP P W LLSAC+ G ++G + + L
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 513 L-RLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYG 571
+ +P Y+++SNI+A A W + R+ ++K G S VEV KE FY
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493
Query: 572 GDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLA 631
G+ +HPL E I ++L ++E+ M+ G+V + LHD+ E+ KE+ L HSE+ A+
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553
Query: 632 LVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCG 691
L++ PG IR+ KNLRVCGDCH +K +S+I + +VRDATR+H F+GG CSC
Sbjct: 554 LLKA----VPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 692 DYW 694
D+W
Sbjct: 610 DFW 612
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 4/201 (1%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G Q+HG ++ +GF + ++N LIDMYAKC ++ A +F +M R+VVSWT+L+ G Q
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQI-HGMCMKSGFEWNPV 149
+G A+ L+L+ M S VKPNE T I A + VE G ++ M G +
Sbjct: 317 HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQ 376
Query: 150 VGNSIIDMYSKCGRINEAARMFDVMP-AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
++D+ + G ++EA + MP TW A+++ G G+ + +
Sbjct: 377 HYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Query: 209 GEIPDEFTFT--STLKACGSL 227
++ D T+ S + A SL
Sbjct: 437 FKLKDPSTYILLSNIYASASL 457
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/581 (38%), Positives = 339/581 (58%), Gaps = 11/581 (1%)
Query: 116 LSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMP 175
LS ++AS S + +IH + +++GF + +++ G + A ++FD M
Sbjct: 13 LSELLRASS--SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70
Query: 176 AKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQ 235
+ WN + GYV + LLL++KM++ G PDEFT+ +KA LG G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 236 IHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQE 295
+H ++ GF ++A LV Y+K G L A +F+ ++ K +++W++ + Q
Sbjct: 131 LHAHVVKYGF--GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 296 ENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS 355
N A A+E F ++ ++Q D F + SM+ +E G++I+ A K + V
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 356 NSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVE 415
N+ +DM+LKCG + A LF EM +NVV+W+ +I GY +G ++EA+ LF M + +
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 416 PDGVAYLAVLSACSHSGLVEESQEYFSRLC--NDKRMKPRIEHYSCIVDSLGRAGRLDEA 473
P+ V +L VLSACSH+GLV E + YFS + NDK ++PR EHY+C+VD LGR+G L+EA
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 474 KNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADA 533
I+ MPV+P IW LL AC VH D+ LG++V ++L+ D +V++SNI+A A
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428
Query: 534 GSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRM 593
G W+ +++R R G KKVA S VE + +IHFF GD +HP ++ I++ L E+ K++
Sbjct: 429 GKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKI 488
Query: 594 KEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRV 653
+ ++G+V HD++ E KE SL HSEKLAI L++G +PG IRV KNLR
Sbjct: 489 R-KMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKG----RPGHPIRVMKNLRT 543
Query: 654 CGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
C DCH F K +S + ++RD RFH F GVCSC ++W
Sbjct: 544 CDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 12/371 (3%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNG 92
++H +++ GFS L L++ G+M A VFD+M + + W L G+++N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 93 NAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN 152
L L+ +M V+P+EFT +KA L G +H +K GF +V
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 153 SIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIP 212
++ MY K G ++ A +F+ M K L+ WNA +A V G S L F KM
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 213 DEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARR 272
D FT S L ACG LGS+ G +I+ ++ ++ + +D ++KCG AR
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI--IVENARLDMHLKCGNTEAARV 266
Query: 273 VFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFAL 332
+F+ ++Q++V+SWS++I+GYA + EA+ LF ++ L+ + ++ + L
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 333 VEQGKQIHAYAAKVPSGLDTSVSNS------IVDMYLKCGLIDEATELFNEMPVK-NVVT 385
V +GK+ Y + + D ++ +VD+ + GL++EA E +MPV+ +
Sbjct: 327 VNEGKR---YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 386 WTVIITGYGKH 396
W ++ H
Sbjct: 384 WGALLGACAVH 394
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%)
Query: 31 GVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQ 90
G LH +VK GF ++ +L+ MY K GE++ A +F+ M +++V+W A + +Q
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
GN+ L F +M + +V+ + FT+ + + A G L S+E G +I+ K + N +V
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
N+ +DM+ KCG A +F+ M +++++W+ MI GY + G S + L LF MQ G
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL 307
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSG 244
P+ TF L AC G V G + ++ S
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 5 SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMN 64
SF++VS L C + L+ G +++ K ++++ N +DM+ KCG
Sbjct: 210 SFTVVS-------MLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 65 GACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASG 124
A +F++M +RNVVSW+ ++ G+ NG+++ L+LF M + ++PN T + A
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 125 VLSSVENGMQIHGMCMKS---GFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLI- 180
V G + + ++S E ++D+ + G + EA MP +
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 181 TWNAMIAG 188
W A++
Sbjct: 383 IWGALLGA 390
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/649 (35%), Positives = 374/649 (57%), Gaps = 31/649 (4%)
Query: 51 NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
N L+ Y K GE++ A VFD M ERNVVSWTAL+ G++ NG SLF +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------ 136
Query: 111 PNEFTLSTNIKASGVLSS--VENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAA 168
P + +S + G L +++ +++ M + + S+I K GR++EA
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAR 192
Query: 169 RMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLG 228
+FD M +S+ITW M+ GY D +F M E E+ ++TS L G
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV----SWTSMLMGYVQNG 248
Query: 229 SVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
+ ++ + VK VIA +++ + G + +ARRVFD +++++ SW +
Sbjct: 249 RIEDAEELFEVM-------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVP 347
+I + + EA++LF ++++ ++ L S++ V A A + GKQ+HA +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 348 SGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFR 407
+D V++ ++ MY+KCG + ++ +F+ P K+++ W II+GY HGL +EA+ +F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 408 KMLLD-DVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGR 466
+M L +P+ V ++A LSACS++G+VEE + + + + +KP HY+C+VD LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 467 AGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMM 526
AGR +EA +I+SM V+P A+W +LL ACR H L++ + L+ ++ +N Y+++
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 527 SNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIH-FFYGGDDTHPLTEKIHQV 585
SN++A G W + LRKL +++ ++K G SW EV+ ++H F GG ++HP E I ++
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 586 LMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKVI 645
L E++ ++E G+ YALHD+ EE K SL+ HSE+LA+ AL++ L+E G I
Sbjct: 602 LDELDGLLREA-GYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK--LSE--GIPI 656
Query: 646 RVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
RV KNLRVC DCH IK +SK+ + ++RDA RFH F G CSC DYW
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 19/386 (4%)
Query: 46 DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
D + +I K G ++ A +FD+M ER+V++WT ++ G+ QN +F
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF---- 226
Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG-NSIIDMYSKCGRI 164
V P + +S S ++ V+NG + PV+ N++I + G I
Sbjct: 227 --DVMPEKTEVSW---TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEI 281
Query: 165 NEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKAC 224
+A R+FD M ++ +W +I + G+ + L LF MQ+ G P T S L C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 225 GSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS 284
SL S+ G Q+H L+ F V +A L+ Y+KCG LV+++ +FD K +I
Sbjct: 342 ASLASLHHGKQVHAQLVRCQF--DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 285 WSSLILGYAQEENLAEAMELFRQLR-ERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYA 343
W+S+I GYA EA+++F ++ S + + + + + +VE+G +I+
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 344 AKVPSGLD--TSVSNSIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHGLAK 400
V G+ T+ +VDM + G +EA E+ + M V+ + W ++ H
Sbjct: 460 ESV-FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 401 EAVGLFRKMLLDDVEPDGVAYLAVLS 426
A +K++ ++EP+ +LS
Sbjct: 519 VAEFCAKKLI--EIEPENSGTYILLS 542
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 222/524 (42%), Gaps = 93/524 (17%)
Query: 51 NDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVK 110
N I ++ G+++ A +FD +++ SW +++ G+ N + LF +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 111 PNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARM 170
P+ +S WN +V Y K G I+EA ++
Sbjct: 75 PDRNIIS----------------------------WNGLVSG-----YMKNGEIDEARKV 101
Query: 171 FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSV 230
FD+MP +++++W A++ GYV G D LF KM E ++ ++T L G +
Sbjct: 102 FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV----SWTVMLIGFLQDGRI 157
Query: 231 GGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLIL 290
+++ + + S++ K G + EAR +FD + ++SVI+W++++
Sbjct: 158 DDACKLYEMIPDK------DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVT 211
Query: 291 GYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGL 350
GY Q + +A ++F + E++ +SM+ + +E +++ P
Sbjct: 212 GYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMPVKP--- 264
Query: 351 DTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML 410
N+++ + G I +A +F+ M +N +W +I + ++G EA+ LF M
Sbjct: 265 -VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 411 LDDVEPDGVAYLAVLSACS-----------HSGLVE---ESQEYF--------------- 441
V P +++LS C+ H+ LV + Y
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 442 -SRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPV----KPSIAIWQTLLSAC 496
S+L D+ I ++ I+ G +EA + MP+ KP+ + LSAC
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 497 RVHGDLELGREVGEILLRLDGDNPV--NYVMMSNIHADAGSWNE 538
G +E G ++ E + + G P+ +Y M ++ AG +NE
Sbjct: 444 SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 182/383 (47%), Gaps = 66/383 (17%)
Query: 148 PVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQE 207
P N I S+ G+I+EA ++FD +KS+ +WN+M+AGY LF
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF----- 71
Query: 208 HGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIA-GSLVDFYVKCGC 266
E+PD + +I+ LV Y+K G
Sbjct: 72 -DEMPD------------------------------------RNIISWNGLVSGYMKNGE 94
Query: 267 LVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGV 326
+ EAR+VFDL+ +++V+SW++L+ GY + A LF ++ E++ +V V+ ++G
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-KVSWTVM--LIGF 151
Query: 327 FADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTW 386
D + + K K D S++ K G +DEA E+F+EM ++V+TW
Sbjct: 152 LQDGRIDDACKLYEMIPDK-----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206
Query: 387 TVIITGYGKHGLAKEAVGLFRKMLLDDVEPDG--VAYLAVLSACSHSGLVEESQEYFSRL 444
T ++TGYG++ +A +F DV P+ V++ ++L +G +E+++E F +
Sbjct: 207 TTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 445 CNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLEL 504
+KP I + ++ LG+ G + +A+ + +SM + A WQT++ +G EL
Sbjct: 261 ----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVIKIHERNG-FEL 313
Query: 505 GREVGEILLRLDGDNPVNYVMMS 527
IL++ G P ++S
Sbjct: 314 EALDLFILMQKQGVRPTFPTLIS 336
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L C+ L +G Q+H LV+ F D+ + + L+ MY KCGE+ + +FD+ +++
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMG-SSSVKPNEFTLSTNIKASGVLSSVENGMQIHG 137
+ W +++ G+ +G + L +FC+M S S KPNE T + A VE G++I+
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 138 MCMKSGFEWNPVVGN--SIIDMYSKCGRINEAARMFDVM 174
M+S F P+ + ++DM + GR NEA M D M
Sbjct: 458 -SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/735 (33%), Positives = 393/735 (53%), Gaps = 55/735 (7%)
Query: 1 MNRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKC 60
MN+ + + R L S+ ++L G LH VK + L+N +++Y+KC
Sbjct: 1 MNQTPWKFKTFRDLLLKSV--AERDLFT--GKSLHALYVKSIVASSTYLSNHFVNLYSKC 56
Query: 61 GEMNGACA-------------------------------VFDKMLERNVVSWTALMCGFL 89
G ++ A A +FD++ + + VS+ L+ G+
Sbjct: 57 GRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA 116
Query: 90 QNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPV 149
A + LF +M + + FTLS I A V+ Q+H + GF+
Sbjct: 117 DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSS 174
Query: 150 VGNSIIDMYSKCGRINEAARMFDVMPA-KSLITWNAMIAGYVLAGYSDKGLLLFRKMQEH 208
V N+ + YSK G + EA +F M + ++WN+MI Y K L L+++M
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 209 GEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG-C- 266
G D FT S L A SL + GG Q HG LI +GF + + + L+DFY KCG C
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN--SHVGSGLIDFYSKCGGCD 292
Query: 267 -LVEARRVFDLIEQKSVISWSSLILGYAQEENLAE-AMELFRQLRERSLQVDGFVLSSMM 324
+ ++ +VF I ++ W+++I GY+ E L+E A++ FRQ++ + D +
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 325 GVFADFALVEQGKQIHAYAAK--VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKN 382
++ + Q KQIH A K +PS SV+N+++ +Y K G + +A +F+ MP N
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSN-RISVNNALISLYYKSGNLQDARWVFDRMPELN 411
Query: 383 VVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFS 442
V++ +I GY +HG EA+ L+++ML + P+ + ++AVLSAC+H G V+E QEYF+
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFN 471
Query: 443 RLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDL 502
+ +++P EHYSC++D LGRAG+L+EA+ I++MP KP W LL ACR H ++
Sbjct: 472 TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531
Query: 503 ELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEV 562
L L+ + YVM++N++ADA W E +RK R K ++K G SW+EV
Sbjct: 532 ALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Query: 563 DKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYAL-HDIQEESKEESLRV 621
K+ H F D +HP+ ++++ L EM K+MK ++G+V K+A+ + + +E +R+
Sbjct: 592 KKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK-KVGYVMDKKWAMVKEDEAGEGDEEMRL 650
Query: 622 --HSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATR 679
HSEKLA+ L ++ + G+ + V KNLR+CGDCH IK +S + +VRD R
Sbjct: 651 GHHSEKLAVAFGL----MSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLR 706
Query: 680 FHRFEGGVCSCGDYW 694
FH F+ G CSCGDYW
Sbjct: 707 FHCFKDGKCSCGDYW 721
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/599 (36%), Positives = 333/599 (55%), Gaps = 15/599 (2%)
Query: 98 LSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDM 157
+SL+ M S P+ F+ +K+ LS +G Q+H K G E P V ++I M
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 158 YSKCGRINEAARMFDVMPAKSLIT--WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEF 215
Y KCG + +A ++F+ P S ++ +NA+I+GY +FR+M+E G D
Sbjct: 98 YCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSV 157
Query: 216 TFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFD 275
T + C + G +HG + G V + S + Y+KCG + RR+FD
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV--AVLNSFITMYMKCGSVEAGRRLFD 215
Query: 276 LIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQ 335
+ K +I+W+++I GY+Q + +EL+ Q++ + D F L S++ A +
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 336 GKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGK 395
G ++ + VSN+ + MY +CG + +A +F+ MPVK++V+WT +I YG
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 396 HGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIE 455
HG+ + + LF M+ + PDG ++ VLSACSHSGL ++ E F + + +++P E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 456 HYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRL 515
HYSC+VD LGRAGRLDEA IESMPV+P A+W LL AC++H ++++ ++
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 516 DGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDT 575
+ +N YV+MSNI++D+ + R+R + R + +K G S+VE +H F GD +
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRS 515
Query: 576 HPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRG 635
H TE++H++L E+E + E G + + E + R HSE+LAI G
Sbjct: 516 HEQTEEVHRMLDELETSVMELAG-------NMDCDRGEEVSSTTREHSERLAIAF----G 564
Query: 636 GLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
LN PG I V KNLRVC DCH F+K +SKI+ FVVRDA+RFH F+ GVCSC DYW
Sbjct: 565 ILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 204/413 (49%), Gaps = 10/413 (2%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ C+ L G QLH + K G + + LI MY KCG + A VF++ + +
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 79 VS--WTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
+S + AL+ G+ N +F +M + V + T+ + V + G +H
Sbjct: 120 LSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179
Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
G C+K G + V NS I MY KCG + R+FD MP K LITWNA+I+GY G +
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS 256
L L+ +M+ G PD FT S L +C LG+ G ++ + ++GF +V ++ +
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV--FVSNA 297
Query: 257 LVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVD 316
+ Y +CG L +AR VFD++ KS++SW+++I Y + LF + +R ++ D
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 317 GFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATEL 374
G V ++ + L ++G ++ A K L+ + +VD+ + G +DEA E
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 375 FNEMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
MPV+ + W ++ H A F K++ + EP+ + Y ++S
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI--EFEPNNIGYYVLMS 467
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 167/328 (50%), Gaps = 10/328 (3%)
Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLI 241
WN + + + L+R M G PD F+F LK+C SL G Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 242 TSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVIS--WSSLILGYAQEENLA 299
G + + +L+ Y KCG + +AR+VF+ Q S +S +++LI GY +
Sbjct: 81 KGGC--ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 300 EAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVS--NS 357
+A +FR+++E + VD + ++ + + G+ +H K GLD+ V+ NS
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK--GGLDSEVAVLNS 196
Query: 358 IVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPD 417
+ MY+KCG ++ LF+EMPVK ++TW +I+GY ++GLA + + L+ +M V PD
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 418 GVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLI 477
++VLS+C+H G + E +L P + + + R G L +A+ +
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 478 ESMPVKPSIAIWQTLLSACRVHGDLELG 505
+ MPVK S+ W ++ +HG E+G
Sbjct: 316 DIMPVK-SLVSWTAMIGCYGMHGMGEIG 342
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 350/650 (53%), Gaps = 49/650 (7%)
Query: 46 DLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMG 105
D++ N +I +CG+MN A +FD+M ER+VVSWTA++ G ++G LF QM
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 106 SSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRIN 165
+K WN S++ Y + G+++
Sbjct: 156 ----------------------------------VKDTAAWN-----SMVHGYLQFGKVD 176
Query: 166 EAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
+A ++F MP K++I+W MI G S + L LF+ M FT + AC
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
+ + G Q+HG +I GF Y + ++ SL+ FY C + ++R+VFD + V W
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLY--EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
++L+ GY+ + +A+ +F + S+ + +S + + ++ GK++H A K
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 346 VPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGL 405
+ D V NS+V MY G +++A +F ++ K++V+W II G +HG K A +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 406 FRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCND-KRMKPRIEHYSCIVDSL 464
F +M+ + EPD + + +LSACSH G +E+ ++ F + + + +I+HY+C+VD L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 465 GRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYV 524
GR G+L EA+ LIE M VKP+ +W LLSACR+H D++ G + + LD + YV
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
Query: 525 MMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQ 584
++SNI+A AG W+ +LR + G+ K G SWV + + H F+ GD H +I++
Sbjct: 535 LLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYE 592
Query: 585 VLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRVHSEKLAIGLALVRGGLNEQPGKV 644
L + +++K ELG+ + ALHD+++E KEE L HSE+LAI L+ N G
Sbjct: 593 KLEFLREKLK-ELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLI----NTVEGSA 647
Query: 645 IRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDYW 694
+ V KNLRVC DCH IK +S ++ V+RD RFH F+ G CSCGDYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 150/273 (54%), Gaps = 3/273 (1%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
+ C+ G+Q+HG ++K+GF ++ ++ LI YA C + + VFD+ + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
WTAL+ G+ N + LS+F M +S+ PN+ T ++ + + L +++ G ++HG+
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+K G E + VGNS++ MYS G +N+A +F + KS+++WN++I G G
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGS-L 257
++F +M + PDE TFT L AC G + G ++ + ++SG + + + + +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCM 470
Query: 258 VDFYVKCGCLVEARRVFD-LIEQKSVISWSSLI 289
VD +CG L EA + + ++ + + + W +L+
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Query: 7 SLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGA 66
S++ + A L CS LD+G ++HG VK+G D + N L+ MY+ G +N A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 67 CAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVL 126
+VF K+ ++++VSW +++ G Q+G K +F QM + +P+E T + + A
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 127 SSVENGMQIHGMCMKSG---FEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITW 182
+E G ++ M SG + ++D+ +CG++ EA + + M K + + W
Sbjct: 441 GFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVW 499
Query: 183 NAMIAGYVLAGYSDKG 198
A+++ + D+G
Sbjct: 500 LALLSACRMHSDVDRG 515
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 269 EARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSL-----QVDGFV---- 319
EAR VF+ + V ++ +I GY + L +A+ LF ++ R + + G V
Sbjct: 53 EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGD 112
Query: 320 LSSMMGVFADF---------ALV----EQGK--QIHAYAAKVPSGLDTSVSNSIVDMYLK 364
+++ + +F + A+V GK Q ++P DT+ NS+V YL+
Sbjct: 113 MNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNSMVHGYLQ 171
Query: 365 CGLIDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAV 424
G +D+A +LF +MP KNV++WT +I G ++ + EA+ LF+ ML ++ + V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 425 LSACSHSGLVEESQEYFSRLCNDKRMKPRIEHY--SCIVDSLGRAGRLDEAKNLIESMPV 482
++AC+++ + + ++ E Y + ++ R+ +++ + + V
Sbjct: 232 ITACANAPAFHMGIQVHGLII---KLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KV 287
Query: 483 KPSIAIWQTLLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERL 542
+A+W LLS ++ E + +LR ++ N A N C L
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS--------ILPNQSTFASGLNSCSAL 339
Query: 543 RKLARSKGLKKVAGRSWVEVD 563
L K + VA + +E D
Sbjct: 340 GTLDWGKEMHGVAVKLGLETD 360
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 17/161 (10%)
Query: 368 IDEATELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSA 427
IDEA E+FN++P +V +T +ITGY + +A+ LF +M + DV V++ +++S
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV----VSWNSMISG 106
Query: 428 CSHSGLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIA 487
C G + + + F D+ + + ++ +V+ R+G++D+A+ L MPVK + A
Sbjct: 107 CVECGDMNTAVKLF-----DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT-A 160
Query: 488 IWQTLLSACRVHGDLELGR--EVGEILLRLDGDNPVNYVMM 526
W ++ VHG L+ G+ + ++ ++ G N +++ M
Sbjct: 161 AWNSM-----VHGYLQFGKVDDALKLFKQMPGKNVISWTTM 196
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 353/616 (57%), Gaps = 36/616 (5%)
Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMF 171
++F+ +KA +S++ GM++HG+ K +P V +DMY+ CGRIN A +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 172 DVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVG 231
D M + ++TWN MI Y G D+ LF +M++ +PDE + + ACG G++
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 232 GGTQIHGFLITSGF----------------------------PYSVKTV-IAGSLVDFYV 262
I+ FLI + SV+ + ++ ++V Y
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 263 KCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSS 322
KCG L +A+ +FD E+K ++ W+++I Y + + EA+ +F ++ ++ D + S
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 323 MMGVFADFALVEQGKQIHAYAAKVPSGLDT--SVSNSIVDMYLKCGLIDEATELFNEMPV 380
++ A+ ++++ K +H+ +GL++ S++N++++MY KCG +D ++F +MP
Sbjct: 350 VISACANLGILDKAKWVHSCIH--VNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 381 KNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEY 440
+NVV+W+ +I HG A +A+ LF +M ++VEP+ V ++ VL CSHSGLVEE ++
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 441 FSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHG 500
F+ + ++ + P++EHY C+VD GRA L EA +IESMPV ++ IW +L+SACR+HG
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 501 DLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWV 560
+LELG+ + +L L+ D+ V+MSNI+A W + +R++ K + K G S +
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Query: 561 EVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLR 620
+ + + H F GD H + +I+ L E+ ++K G+V L D++EE K++ +
Sbjct: 588 DQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA-GYVPDCGSVLVDVEEEEKKDLVL 646
Query: 621 VHSEKLAIGLALVRGGLNEQPGK--VIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDAT 678
HSEKLA+ L+ E+ VIR+ KNLRVC DCH F K +SK+ + +VRD T
Sbjct: 647 WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRT 706
Query: 679 RFHRFEGGVCSCGDYW 694
RFH ++ G+CSC DYW
Sbjct: 707 RFHCYKNGLCSCRDYW 722
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 213/443 (48%), Gaps = 41/443 (9%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
L+ SK L G++LHG K+ D + +DMYA CG +N A VFD+M R+V
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSS---------- 128
V+W ++ + + G LF +M S+V P+E L + A G +
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 129 -VENG--MQIHGM-----------CMKSGFEW-------NPVVGNSIIDMYSKCGRINEA 167
+EN M H + CM E+ N V +++ YSKCGR+++A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
+FD K L+ W MI+ YV + Y + L +F +M G PD + S + AC +L
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANL 357
Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSS 287
G + +H + +G + I +L++ Y KCG L R VF+ + +++V+SWSS
Sbjct: 358 GILDKAKWVHSCIHVNGLESELS--INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 288 LILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAA--- 344
+I + ++A+ LF ++++ +++ + ++ + LVE+GK+I A
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 345 KVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPV-KNVVTWTVIITGYGKHGLAKEAV 403
+ L+ +VD++ + L+ EA E+ MPV NVV W +++ HG + +
Sbjct: 476 NITPKLEH--YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG--ELEL 531
Query: 404 GLFRKMLLDDVEPDGVAYLAVLS 426
G F + ++EPD L ++S
Sbjct: 532 GKFAAKRILELEPDHDGALVLMS 554
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 176/367 (47%), Gaps = 36/367 (9%)
Query: 167 AARMFDVMPAKS-LITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACG 225
A +F +P+ I +N + + +L +++++ G D+F+F LKA
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 226 SLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQKSVISW 285
+ ++ G ++HG + + +D Y CG + AR VFD + + V++W
Sbjct: 123 KVSALFEGMELHG--VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 286 SSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIHAYAAK 345
+++I Y + + EA +LF ++++ ++ D +L +++ + + I+ + +
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 346 VPSGLDTSVSNSIVDMYL-------------------------------KCGLIDEATEL 374
+DT + ++V MY KCG +D+A +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 375 FNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLV 434
F++ K++V WT +I+ Y + +EA+ +F +M ++PD V+ +V+SAC++ G++
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL 360
Query: 435 EESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLS 494
++++ + + ++ + + +++ + G LD +++ E MP + ++ W ++++
Sbjct: 361 DKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMIN 418
Query: 495 ACRVHGD 501
A +HG+
Sbjct: 419 ALSMHGE 425
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 331/601 (55%), Gaps = 38/601 (6%)
Query: 127 SSVENGMQIHGMCMKSGFEWNPVVGNSIIDM---YSKCGRINEAARMFDVMPAKSLITWN 183
S E QIH +K+G + + + + A +FD WN
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 184 AMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITS 243
MI G+ + ++ LLL+++M + +TF S LKAC +L + TQIH +
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 244 GFP---YSVKTVIA--------------------------GSLVDFYVKCGCLVEARRVF 274
G+ Y+V ++I S++ YVK G + A +F
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 275 DLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVE 334
+ +K+ ISW+++I GY Q + EA++LF +++ ++ D L++ + A +E
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 335 QGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIITGYG 394
QGK IH+Y K +D+ + ++DMY KCG ++EA E+F + K+V WT +I+GY
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 395 KHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLCNDKRMKPRI 454
HG +EA+ F +M ++P+ + + AVL+ACS++GLVEE + F + D +KP I
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 455 EHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGREVGEILLR 514
EHY CIVD LGRAG LDEAK I+ MP+KP+ IW LL ACR+H ++ELG E+GEIL+
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 515 LDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKEIHFFYGGDD 574
+D + YV +NIHA W++ R+L + +G+ KV G S + ++ H F GD
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 575 THPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESL-RVHSEKLAIGLALV 633
+HP EKI M +++ EE G+V ++ L D+ ++ + E++ HSEKLAI L+
Sbjct: 505 SHPEIEKIQSKWRIMRRKL-EENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLI 563
Query: 634 RGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFEGGVCSCGDY 693
+ +PG +IR+ KNLRVC DCH+ K +SKI K V+RD TRFH F G CSCGDY
Sbjct: 564 KT----KPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDY 619
Query: 694 W 694
W
Sbjct: 620 W 620
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 193/425 (45%), Gaps = 43/425 (10%)
Query: 5 SFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGE-- 62
SFSL L+ CSK L Q+H ++K G D +
Sbjct: 7 SFSLEHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSD 63
Query: 63 -MNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIK 121
+ A VFD + W ++ GF + + L L+ +M SS N +T + +K
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 122 ASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLIT 181
A LS+ E QIH K G+E + NS+I+ Y+ G A +FD +P ++
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 182 WNAMIAGYVLAGYSDKGLLLFRKMQEHGEI------------------------------ 211
WN++I GYV AG D L LFRKM E I
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 212 -PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
PD + + L AC LG++ G IH +L + + +V+ L+D Y KCG + EA
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEA 301
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADF 330
VF I++KSV +W++LI GYA + EA+ F ++++ ++ + ++++ +
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 331 ALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWT 387
LVE+GK I Y+ + L ++ + IVD+ + GL+DEA EMP+K N V W
Sbjct: 362 GLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420
Query: 388 VIITG 392
++
Sbjct: 421 ALLKA 425
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 41/334 (12%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYA-------------------- 58
L+ CS + Q+H + K+G+ D+ N LI+ YA
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 59 -----------KCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSS 107
K G+M+ A +F KM E+N +SWT ++ G++Q K L LF +M +S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 108 SVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEA 167
V+P+ +L+ + A L ++E G IH K+ + V+G +IDMY+KCG + EA
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 168 ARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSL 227
+F + KS+ W A+I+GY G+ + + F +MQ+ G P+ TFT+ L AC
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 228 GSVGGGTQIHGFLITSGFPYSVKTVIA--GSLVDFYVKCGCLVEARR-VFDLIEQKSVIS 284
G V G I + Y++K I G +VD + G L EA+R + ++ + + +
Sbjct: 362 GLVEEGKLI---FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Query: 285 WSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
W +L+ +N+ EL ++ E + +D +
Sbjct: 419 WGALLKACRIHKNI----ELGEEIGEILIAIDPY 448
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 1 MNRVSFSLVSERQR---------LADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNN 51
MN+ + L E Q LA++L C++ L+ G +H L K D +L
Sbjct: 227 MNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC 286
Query: 52 DLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKP 111
LIDMYAKCGEM A VF + +++V +WTAL+ G+ +G+ + +S F +M +KP
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 112 NEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVGN--SIIDMYSKCGRINEAAR 169
N T + + A VE G I M+ + P + + I+D+ + G ++EA R
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKR 405
Query: 170 MFDVMPAK-SLITWNAMIAG 188
MP K + + W A++
Sbjct: 406 FIQEMPLKPNAVIWGALLKA 425
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 372/670 (55%), Gaps = 9/670 (1%)
Query: 26 LLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALM 85
L++ G LHG +K G + +++NN L+ MY K A VFD+M R+ VS+ ++
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 86 CGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
CG+L+ + + +F + KP+ T+S+ ++A G L + I+ +K+GF
Sbjct: 281 CGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 146 WNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKM 205
V N +ID+Y+KCG + A +F+ M K ++WN++I+GY+ +G + + LF+ M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 206 QEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCG 265
E D T+ + L + G +H I SG + ++ +L+D Y KCG
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI--CIDLSVSNALIDMYAKCG 457
Query: 266 CLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMG 325
+ ++ ++F + ++W+++I + + A +++ Q+R+ + D +
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 326 VFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVT 385
+ A A GK+IH + + + N++++MY KCG ++ ++ +F M ++VVT
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 386 WTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC 445
WT +I YG +G ++A+ F M + PD V ++A++ ACSHSGLV+E F ++
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 446 NDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELG 505
++ P IEHY+C+VD L R+ ++ +A+ I++MP+KP +IW ++L ACR GD+E
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 506 REVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLKKVAGRSWVEVDKE 565
V ++ L+ D+P ++ SN +A W++ +RK + K + K G SW+EV K
Sbjct: 698 ERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKN 757
Query: 566 IHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQEESKEESLRV-HSE 624
+H F GDD+ P +E I++ L + M +E G++ + +++EE ++ L HSE
Sbjct: 758 VHVFSSGDDSAPQSEAIYKSLEILYSLMAKE-GYIPDPREVSQNLEEEEEKRRLICGHSE 816
Query: 625 KLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVFVVRDATRFHRFE 684
+LAI L LN +PG ++V KNLRVCGDCHE K +SKI+ +VRDA RFH F+
Sbjct: 817 RLAIAFGL----LNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFK 872
Query: 685 GGVCSCGDYW 694
G CSC D W
Sbjct: 873 DGTCSCKDRW 882
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 229/411 (55%), Gaps = 3/411 (0%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
++ C+ + G ++ ++ MGF DL + N L+DMY++ G + A VFD+M R++
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
VSW +L+ G+ +G + L ++ ++ +S + P+ FT+S+ + A G L V+ G +HG
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+KSG VV N ++ MY K R +A R+FD M + +++N MI GY+ ++
Sbjct: 233 ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES 292
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
+ +F + + + PD T +S L+ACG L + I+ +++ +GF +++ + L+
Sbjct: 293 VRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF--VLESTVRNILI 349
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
D Y KCG ++ AR VF+ +E K +SW+S+I GY Q +L EAM+LF+ + Q D
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEM 378
++ V A ++ GK +H+ K +D SVSN+++DMY KCG + ++ ++F+ M
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 379 PVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACS 429
+ VTW +I+ + G + + +M +V PD +L L C+
Sbjct: 470 GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 256/482 (53%), Gaps = 16/482 (3%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLE-RNVVSWTALMCGFLQN 91
++H ++ +G + LID Y+ E + +VF ++ +NV W +++ F +N
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 92 GNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVVG 151
G L + ++ S V P+++T + IKA L E G ++ + GFE + VG
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 152 NSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEI 211
N+++DMYS+ G + A ++FD MP + L++WN++I+GY GY ++ L ++ +++ +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 212 PDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR 271
PD FT +S L A G+L V G +HGF + SG + V+ LV Y+K +AR
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG--VNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 272 RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFA 331
RVFD ++ + +S++++I GY + E + E++ +F + ++ + D +SS++
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLR 321
Query: 332 LVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVKNVVTWTVIIT 391
+ K I+ Y K L+++V N ++D+Y KCG + A ++FN M K+ V+W II+
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 392 GYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVE-----ESQEYFSRLCN 446
GY + G EA+ LF+ M++ + + D + YL ++S + ++ S S +C
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 447 DKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTLLSACRVHGDLELGR 506
D + + ++D + G + ++ + SM ++ W T++SAC GD G
Sbjct: 442 DLSVS------NALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGL 494
Query: 507 EV 508
+V
Sbjct: 495 QV 496
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 211/418 (50%), Gaps = 9/418 (2%)
Query: 19 LRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNV 78
LR C L ++ ++K GF + + N LID+YAKCG+M A VF+ M ++
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 79 VSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGM 138
VSW +++ G++Q+G+ + LF M + + T I S L+ ++ G +H
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 139 CMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKG 198
+KSG + V N++IDMY+KCG + ++ ++F M +TWN +I+ V G G
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 199 LLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLV 258
L + +M++ +PD TF TL C SL + G +IH L+ F Y + I +L+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR--FGYESELQIGNALI 551
Query: 259 DFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGF 318
+ Y KCGCL + RVF+ + ++ V++W+ +I Y +A+E F + + + D
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 319 VLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFN 376
V +++ + LV++G K +D + + +VD+ + I +A E
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFE-KMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 377 EMPVK-NVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGL 433
MP+K + W ++ G + A + R+++ ++ PD Y ++L++ +++ L
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRII--ELNPDDPGY-SILASNAYAAL 725
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 343/622 (55%), Gaps = 65/622 (10%)
Query: 128 SVENGMQIHGMCMKSGFEWNPVVGNSII------DMYSKCGRINEAARMFDVMPAKSLIT 181
++ + QIH + +KSG + + I+ D++ + ++ A ++F+ MP ++ +
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 92
Query: 182 WNAMIAGYVLAGYSDKGL----LLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIH 237
WN +I G+ + DK L L + M + P+ FTF S LKAC G + G QIH
Sbjct: 93 WNTIIRGFSESD-EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 238 GFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEAR-------------------------- 271
G + GF + +LV YV CG + +AR
Sbjct: 152 GLALKYGF--GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 272 -------------------RVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
+FD + Q+SV+SW+++I GY+ +A+E+FR++++
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
++ + L S++ + +E G+ +H YA +D + ++++DMY KCG+I++A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSG 432
+F +P +NV+TW+ +I G+ HG A +A+ F KM V P VAY+ +L+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 433 LVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQTL 492
LVEE + YFS++ + ++PRIEHY C+VD LGR+G LDEA+ I +MP+KP IW+ L
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 493 LSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGLK 552
L ACR+ G++E+G+ V IL+ + + YV +SN++A G+W+E +R + K ++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 553 KVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQE 612
K G S +++D +H F DD+HP ++I+ +L+E+ +++ G+ L +++E
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA-GYRPITTQVLLNLEE 568
Query: 613 ESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLVF 672
E KE L HSEK+A L+ + PGK IR+ KNLR+C DCH IK +SK+ K
Sbjct: 569 EDKENVLHYHSEKIATAFGLI----STSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 673 VVRDATRFHRFEGGVCSCGDYW 694
VRD RFH F+ G CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 226/476 (47%), Gaps = 60/476 (12%)
Query: 33 QLHGALVKMGFSFDLMLNNDLIDMYAKCG----EMNGACAVFDKMLERNVVSWTALMCGF 88
Q+H +K G D + +++ A +++ A +F++M +RN SW ++ GF
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 89 LQNGNAKA--CLSLFCQMGSSS-VKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFE 145
++ KA ++LF +M S V+PN FT + +KA ++ G QIHG+ +K GF
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 146 WNPVVGNSIIDMYSKCGRINE--------------------------------------- 166
+ V ++++ MY CG + +
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 167 -----AARM-FDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGEIPDEFTFTST 220
AARM FD M +S+++WN MI+GY L G+ + +FR+M++ P+ T S
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 221 LKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEARRVFDLIEQK 280
L A LGS+ G +H + SG + V+ +L+D Y KCG + +A VF+ + ++
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGI--RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 281 SVISWSSLILGYAQEENLAEAMELFRQLRERSLQVDGFVLSSMMGVFADFALVEQGKQIH 340
+VI+WS++I G+A +A++ F ++R+ ++ +++ + LVE+G++
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 341 AYAAKVPSGLDTSVSN--SIVDMYLKCGLIDEATELFNEMPVK-NVVTWTVIITGYGKHG 397
+ V GL+ + + +VD+ + GL+DEA E MP+K + V W ++ G
Sbjct: 399 SQMVSV-DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 398 LAKEAVGLFRKMLLDDVEPDGVAYLAVLSACSHSGLVEESQEYFSRLC-NDKRMKP 452
E +L+D V D AY+A+ + + G E E R+ D R P
Sbjct: 458 NV-EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 58/335 (17%)
Query: 2 NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
NR +F V L+ C+K + G Q+HG +K GF D + ++L+ MY CG
Sbjct: 127 NRFTFPSV---------LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG 177
Query: 62 EMN-----------------------------------------GACA----VFDKMLER 76
M G C +FDKM +R
Sbjct: 178 FMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQR 237
Query: 77 NVVSWTALMCGFLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIH 136
+VVSW ++ G+ NG K + +F +M ++PN TL + + A L S+E G +H
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 137 GMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSD 196
SG + V+G+++IDMYSKCG I +A +F+ +P +++ITW+AMI G+ + G +
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Query: 197 KGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLIT-SGFPYSVKTVIAG 255
+ F KM++ G P + + + L AC G V G + +++ G ++ G
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY--G 415
Query: 256 SLVDFYVKCGCLVEARR-VFDLIEQKSVISWSSLI 289
+VD + G L EA + ++ + + W +L+
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 28 LDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCGEMNGACAVFDKMLERNVVSWTALMCG 87
L+ G LH G D +L + LIDMY+KCG + A VF+++ NV++W+A++ G
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMING 349
Query: 88 FLQNGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHG-MCMKSGFEW 146
F +G A + FC+M + V+P++ + A VE G + M G E
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409
Query: 147 NPVVGNSIIDMYSKCGRINEAARMFDVMPAK-SLITWNAMIAGYVLAGYSDKG 198
++D+ + G ++EA MP K + W A++ + G + G
Sbjct: 410 RIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMG 462
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/623 (35%), Positives = 348/623 (55%), Gaps = 16/623 (2%)
Query: 77 NVVSWTALMCGFLQNGNAKACL----SLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENG 132
N+ + T+L F+Q+ + L L C + S ++F + + L +
Sbjct: 39 NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSA 98
Query: 133 MQIHGMCMKSGFEWNPVVGNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLA 192
+ ++G K N + N +I+ Y + G + A ++FD MP + L TWNAMIAG +
Sbjct: 99 VAVYGRMRKK----NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQF 154
Query: 193 GYSDKGLLLFRKMQEHGEIPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTV 252
++++GL LFR+M G PDE+T S L SV G QIHG+ I G + V
Sbjct: 155 EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL--ELDLV 212
Query: 253 IAGSLVDFYVKCGCLVEARRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS 312
+ SL Y++ G L + V + +++++W++LI+G AQ + L++ ++
Sbjct: 213 VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISG 272
Query: 313 LQVDGFVLSSMMGVFADFALVEQGKQIHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEAT 372
+ + +++ +D A+ QG+QIHA A K+ + +V +S++ MY KCG + +A
Sbjct: 273 CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAA 332
Query: 373 ELFNEMPVKNVVTWTVIITGYGKHGLAKEAVGLFRKML-LDDVEPDGVAYLAVLSACSHS 431
+ F+E ++ V W+ +I+ YG HG EA+ LF M ++E + VA+L +L ACSHS
Sbjct: 333 KAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHS 392
Query: 432 GLVEESQEYFSRLCNDKRMKPRIEHYSCIVDSLGRAGRLDEAKNLIESMPVKPSIAIWQT 491
GL ++ E F + KP ++HY+C+VD LGRAG LD+A+ +I SMP+K I IW+T
Sbjct: 393 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 452
Query: 492 LLSACRVHGDLELGREVGEILLRLDGDNPVNYVMMSNIHADAGSWNECERLRKLARSKGL 551
LLSAC +H + E+ + V + +L++D ++ YV+++N+HA A W + +RK R K +
Sbjct: 453 LLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNV 512
Query: 552 KKVAGRSWVEVDKEIHFFYGGDDTHPLTEKIHQVLMEMEKRMKEELGFVYGVKYALHDIQ 611
KK AG SW E E+H F GD + +++I+ L E+ MK + G+ LHD+
Sbjct: 513 KKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK-GYKPDTASVLHDMD 571
Query: 612 EESKEESLRVHSEKLAIGLALVRGGLNEQPGKVIRVFKNLRVCGDCHEFIKGLSKILKLV 671
EE KE L HSEKLA+ AL+ L E G IR+ KNLRVC DCH K +S I
Sbjct: 572 EEEKESDLVQHSEKLAVAFALMI--LPE--GAPIRIIKNLRVCSDCHVAFKYISVIKNRE 627
Query: 672 FVVRDATRFHRFEGGVCSCGDYW 694
+RD +RFH F G CSCGDYW
Sbjct: 628 ITLRDGSRFHHFINGKCSCGDYW 650
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 217/463 (46%), Gaps = 46/463 (9%)
Query: 2 NRVSFSLVSERQRLADSLRCCSKNLLLDYGVQLHGALVKMGFSFDLMLNNDLIDMYAKCG 61
R ++ + ++ C+ L G QLH LV GFS D + N L+ MY+K G
Sbjct: 34 QRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLG 93
Query: 62 EMNGACAV-------------------------------FDKMLERNVVSWTALMCGFLQ 90
+ A AV FD+M +R + +W A++ G +Q
Sbjct: 94 DFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQ 153
Query: 91 NGNAKACLSLFCQMGSSSVKPNEFTLSTNIKASGVLSSVENGMQIHGMCMKSGFEWNPVV 150
+ LSLF +M P+E+TL + S L SV G QIHG +K G E + VV
Sbjct: 154 FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVV 213
Query: 151 GNSIIDMYSKCGRINEAARMFDVMPAKSLITWNAMIAGYVLAGYSDKGLLLFRKMQEHGE 210
+S+ MY + G++ + + MP ++L+ WN +I G G + L L++ M+ G
Sbjct: 214 NSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 273
Query: 211 IPDEFTFTSTLKACGSLGSVGGGTQIHGFLITSGFPYSVKTVIAGSLVDFYVKCGCLVEA 270
P++ TF + L +C L G G QIH I G S + SL+ Y KCGCL +A
Sbjct: 274 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG--ASSVVAVVSSLISMYSKCGCLGDA 331
Query: 271 RRVFDLIEQKSVISWSSLILGYAQEENLAEAMELFRQLRERS-LQVDGFVLSSMMGVFAD 329
+ F E + + WSS+I Y EA+ELF + E++ ++++ +++ +
Sbjct: 332 AKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 391
Query: 330 FALVEQGKQ-----IHAYAAKVPSGLDTSVSNSIVDMYLKCGLIDEATELFNEMPVK-NV 383
L ++G + + Y K GL +VD+ + G +D+A + MP+K ++
Sbjct: 392 SGLKDKGLELFDMMVEKYGFK--PGLKHYT--CVVDLLGRAGCLDQAEAIIRSMPIKTDI 447
Query: 384 VTWTVIITGYGKHGLAKEAVGLFRKMLLDDVEPDGVAYLAVLS 426
V W +++ H A+ A +F+++L ++P+ A +L+
Sbjct: 448 VIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLA 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,104,890
Number of Sequences: 539616
Number of extensions: 10724173
Number of successful extensions: 35991
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 26716
Number of HSP's gapped (non-prelim): 2331
length of query: 694
length of database: 191,569,459
effective HSP length: 125
effective length of query: 569
effective length of database: 124,117,459
effective search space: 70622834171
effective search space used: 70622834171
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)