Your job contains 1 sequence.
>005482
MITVMDSAKDAMKKNPTGESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVE
LPNFNIPSMIPCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNES
SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFR
HIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGSDYS
VGWNSGGGNCGFPFGGYSGYMREDENKSSRRNSSSDLRGRVRAESVTEAAALAANGQPFE
VVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADP
IRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEHSD
FSLINQLPTPSFTRNPLVTSSPFCCISDNIPAGIQGARHAQYGLSSSDLHFNKLQSSLFP
LGFQQLEHTTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQL
ILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHK
KSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAA
GSVKHTGDEPFSEFLKTARRLTILTDSGSDSVGR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005482
(694 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 2049 5.5e-212 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 1735 1.0e-178 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 950 1.6e-95 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 505 8.8e-80 4
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 495 3.2e-77 4
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 487 8.7e-76 3
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 496 1.1e-75 3
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 497 1.2e-75 3
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 460 8.9e-73 3
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 477 4.5e-72 3
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 470 8.3e-72 3
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 454 7.8e-71 3
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 504 1.1e-66 2
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 453 1.2e-66 3
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 396 1.7e-56 3
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 409 4.1e-56 3
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 401 3.6e-54 3
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 377 2.2e-53 3
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 409 1.6e-52 3
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 375 5.2e-47 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 354 1.2e-31 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 168 1.7e-09 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 167 2.0e-09 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 156 9.3e-09 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 158 1.7e-08 1
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 138 2.5e-08 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 158 2.5e-08 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 157 2.7e-08 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 153 8.8e-08 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 144 5.8e-07 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 145 7.2e-07 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 117 4.4e-06 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 133 8.6e-06 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 131 1.2e-05 1
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 137 0.00047 3
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 123 0.00063 1
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 111 0.00066 1
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 2049 (726.3 bits), Expect = 5.5e-212, P = 5.5e-212
Identities = 437/703 (62%), Positives = 505/703 (71%)
Query: 1 MITVMDSAKDAMKKNPTGESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVE 60
MI VM+ K +K LD QLWHACAGGMV+MP +NSKVFYFPQGH E+A V+
Sbjct: 1 MINVMNPMKGGTEKG------LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD 54
Query: 61 LPNFNIPSMIPCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFE-DVGFDGNGGISNE 119
N IP M+ CRV AIK+MADAE+DEV+A++RLI LK + + D E G D NG SN
Sbjct: 55 FGNLPIPPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESN- 113
Query: 120 SSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKF 179
SEK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+AEPPVQTILAKDVHG+VWKF
Sbjct: 114 -SEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKF 172
Query: 180 RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXXSDY 239
RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVF+RAENGDLCV +Y
Sbjct: 173 RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEY 232
Query: 240 SVGWXXXXXXXXXXXXXXXXYMREDENKSSRRNSSS--DLRGRVRAESVTEXXXXXXNGQ 297
S GW +REDE+ S RR++ S D +G+V AESV E +G+
Sbjct: 233 SAGWNPIGGSCGYSSL-----LREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGR 287
Query: 298 PFEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQV 357
PFEVVYYPRAST EF VKA RAAM+I WCSGMRFKMAFETEDSSRISWFMGT+S+V V
Sbjct: 288 PFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNV 347
Query: 358 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPE 417
+DPIRWPNSPWRLLQVAWDEPDLLQNVKRV+PWLVELVSN+ I L+ FSP RKK+RLP+
Sbjct: 348 SDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQ 407
Query: 418 HSDFS-LINQLPTPSFTRNPLVTSSPFCCISDNIPAGIQGARH---AQYGLSSSDLHFNK 473
H D++ LIN +P PSF NPL+ SSP + DN+P G+QGARH YGLSSSDLH
Sbjct: 408 HPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYY 467
Query: 474 LQSSLFPLGFQQLEHTTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPH 533
L P L+ + P+ + N +T N K C LTMG T D + K H
Sbjct: 468 LNRPPPPPPPSSLQLS--PS-LGLRNI--DTKNEKGF-CFLTMG--TTPCNDT-KSKKSH 518
Query: 534 IILFGQLILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLE---NSSD 590
I+LFG+LILP++ S+ S DT N EKT ISS GS +QNG +SSD
Sbjct: 519 IVLFGKLILPEEQLSEKGSTDT-------ANIEKTQISSGGS----NQNGVAGREFSSSD 567
Query: 591 EGSPWCKD-HKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAE 649
EGSP K H S GLE GHCKVFMES+DVGRTLDLSVLGSYEEL KL++MFGI+ +E
Sbjct: 568 EGSPCSKKVHDAS--GLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSE 625
Query: 650 MFSNVLYRDAAGSVKHTGDEPFSEFLKTARRLTILTDSGSDSV 692
M S+VLYRDA+G++K+ G+EPFSEFLKTARRLTILT+ GS+SV
Sbjct: 626 MLSSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQGSESV 668
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 1735 (615.8 bits), Expect = 1.0e-178, P = 1.0e-178
Identities = 387/702 (55%), Positives = 459/702 (65%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVELPNFNIPSMIPCRVTAIK 78
E LD QLWHACAG MVQ+P +NS VFYF QGH EHA + +P +I CRV ++K
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPLILCRVVSVK 63
Query: 79 FMADAETDEVYARIRLIALKSNCFDDFED--VGF-----DGNGGISNESSEKPASFAKTL 131
F+ADAETDEV+A+I L+ L N D D +G DGNG EKPASFAKTL
Sbjct: 64 FLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGN----GKEKPASFAKTL 119
Query: 132 TQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHL 191
TQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQT++AKD+HGE WKFRHIYRGTPRRHL
Sbjct: 120 TQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 179
Query: 192 LTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVXXXXXXXXX--XXXXSDYSVGWXXXXXX 249
LTTGWS FVNQKKL+AGDSIVFLR+E+GDLCV SD
Sbjct: 180 LTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLR 239
Query: 250 XXXXXXXXXXYMREDENKSSRRNSSSDLRGRVRAESVTEXXXXXXNGQPFEVVYYPRAST 309
M N ++ N+++ GRVR E+V E GQ FEVVYYPRAST
Sbjct: 240 DDESTTTTSKLMMMKRNGNNDGNAAAT--GRVRVEAVAEAVARAACGQAFEVVYYPRAST 297
Query: 310 PEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 369
PEF VKA+ VR+AM+I+WCSGMRFKMAFETEDSSRISWFMGT+S+VQVADPIRWPNSPWR
Sbjct: 298 PEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWR 357
Query: 370 LLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEHSDFSLIN-QLP 428
LLQVAWDEPDLLQNVKRVSPWLVELVSN+P IHLSPFSP RKK+R+P+ +F + P
Sbjct: 358 LLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFHGTKFP 416
Query: 429 --TPSFTRNPLVTSSPFCCISD---NIPAGIQGARHAQ--YGLSSSDLHFNKLQSSLFPL 481
+P F N C +S+ N PAGIQGAR AQ +G S L + L S +
Sbjct: 417 IFSPGFANNG--GGESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSL-LSDLNLSSYT- 472
Query: 482 GFQQLEHTTRPAR-VSSAN-----FMS-ETGNSKNISCLLTMGNPT--QSFKDNI-EVKT 531
G +L H+ PA +SS N + + ++ NS NISC LTMGNP Q K ++ VKT
Sbjct: 473 GNNKL-HS--PAMFLSSFNPRHHHYQARDSENSNNISCSLTMGNPAMVQDKKKSVGSVKT 529
Query: 532 PHIILFGQLILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDE 591
+LFGQ IL +Q Q + + ++ EK ++
Sbjct: 530 HQFVLFGQPILTEQ---QVMNRKRFLEEEAEAEEEKGLVA-------------------R 567
Query: 592 GSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIES-AEM 650
G W S GLE GHCKVFMESEDVGRTLDLSV+GSY+ELY KLA MF IE +++
Sbjct: 568 GLTW----NYSLQGLETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDL 623
Query: 651 FSNVLYRDAAGSVKHTGDEPFSEFLKTARRLTILTDSGSDSV 692
++V+YRDA G +K GDEPFS+F+K +RLTI D G D+V
Sbjct: 624 LTHVVYRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDNV 665
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 224/587 (38%), Positives = 315/587 (53%)
Query: 22 LDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVE-LPNFNIPSMIPCRVTAIKFM 80
+D +W ACAG VQ+P ++S+V+YFPQGH+EH + LP+ P +PC +T+I+ +
Sbjct: 16 VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--VPCIITSIQLL 73
Query: 81 ADAETDEVYARIRLIALKSNCFD--DFEDVG-FDGNGGISNESSEKPASFAKTLTQSDAN 137
AD TDEV+A + L + F ++ G FDG+ +N K +FAK LT SDAN
Sbjct: 74 ADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNN----KVTTFAKILTPSDAN 129
Query: 138 NGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 197
NGGGFSVPR+CA+++FP L++ +PPVQ + D+HG VW FRHIYRGTPRRHLLTTGWS
Sbjct: 130 NGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWS 189
Query: 198 NFVNQKKLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXXSDYSVGWXXXXXXXXXXXXXX 257
FVN KKL+AGDS+VF+R ++ + S Y G
Sbjct: 190 KFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGG------DEYNGYYSQ 243
Query: 258 XXYMREDENKSSRRNSSSDLRGRVRAESVTEXXXXXXNGQPFEVVYYPRASTPEFVVKAS 317
+ED+ S ++ G++ AE+VT+ G PFEVV+YP A EFVV+A
Sbjct: 244 SSVAKEDDG-SPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAE 302
Query: 318 AVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSV-QVADPIRWPNSPWRLLQVAWD 376
V ++M + W G R KMA ETEDSSRI+WF G +SS Q P W SPW+ LQ+ WD
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP--WRGSPWKQLQITWD 360
Query: 377 EPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEHSDFSLINQ-----LPTPS 431
EP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ P+ L P
Sbjct: 361 EPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILYPQSG 418
Query: 432 FTRNPLVTSSPFCCISDNIPAGIQGARHAQYGLSSSDLHFNKLQSSLFPLGFQQLEHTTR 491
+ SP PAG+QGAR +G + LF F L
Sbjct: 419 LSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNF--LSPLPD 476
Query: 492 PARVSSA--NFMSETGN--SKNISCL-LTMGNPTQSFKDNIEVKTPHIILFGQLILPQQN 546
+VS+ NF S + S N + L+ GN + + K I LFG++I +++
Sbjct: 477 LGKVSTEMMNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPLSKKVNSIQLFGKIITVEEH 536
Query: 547 SSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGS 593
S + + DG+ E + + S S + P ++S+ GS
Sbjct: 537 SESGPAESGLCEE--DGSKESSDNETQLSLSHAPPSVPKHSNSNAGS 581
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 505 (182.8 bits), Expect = 8.8e-80, Sum P(4) = 8.8e-80
Identities = 103/212 (48%), Positives = 141/212 (66%)
Query: 18 GESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEH--AKGNVE----LPNF-NIPSMI 70
GE CL+S+LWHACAG +V +P S+V YFPQGH E A N E +PN+ ++P +
Sbjct: 15 GEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQL 74
Query: 71 PCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPAS-FAK 129
C++ + AD ETDEVYA++ L L ++ ++ GI S++P++ F K
Sbjct: 75 ICQLHNVTMHADVETDEVYAQMTLQPLTP---EEQKETFVPIELGIP---SKQPSNYFCK 128
Query: 130 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRR 189
TLT SD + GGFSVPR AE +FP LDY+ +PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 190 HLLTTGWSNFVNQKKLVAGDSIVFLRAENGDL 221
HLLTTGWS FV+ K+LVAGDS++F+R E L
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQL 220
Score = 230 (86.0 bits), Expect = 8.8e-80, Sum P(4) = 8.8e-80
Identities = 52/125 (41%), Positives = 76/125 (60%)
Query: 299 FEVVYYPRASTPEFVVKASA-VRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQV 357
F V ++PRAS EFV++ S ++A + GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 358 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPE 417
D +RWPNS WR ++V WDE + RVS W +E ++ P ++ S F P R L+ P
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLF-PLR--LKRPW 376
Query: 418 HSDFS 422
H+ S
Sbjct: 377 HAGTS 381
Score = 92 (37.4 bits), Expect = 8.8e-80, Sum P(4) = 8.8e-80
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESA---EMFSN--VLYRDAAGSVKHT 666
KV+ +S VGR+LD+S SY EL +L MF IE + S +++ D +
Sbjct: 709 KVY-KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLL 767
Query: 667 GDEPFSEFLKTARRLTILTDSGSDSVG 693
GD+P+ F+ + IL+ +G
Sbjct: 768 GDDPWESFVNNVWYIKILSPEDVHQMG 794
Score = 54 (24.1 bits), Expect = 2.0e-73, Sum P(3) = 2.0e-73
Identities = 50/208 (24%), Positives = 87/208 (41%)
Query: 425 NQLPTPSFTRNPLVTSS-PFCCISDNIPAGIQGARHAQYGLSSSDLHFNKLQSSLFPLGF 483
+++P+PSF ++ SS F + PA G + L+F+ S+ P
Sbjct: 552 SEMPSPSFMKSDFTDSSNKFATTAS--PASGDG----------NLLNFSITGQSVLP--- 596
Query: 484 QQLEHTTRPARVSSANFMSETGNSKNI----SCLLTMGNPTQSFKDNIEVKTPHIILFGQ 539
+QL TT ++N SE + S L GNP ++ P LF
Sbjct: 597 EQL--TTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGNPQNPSLFGVD---PDSGLFLP 651
Query: 540 LILPQQNSSQSCSGDTIVNSLSDGNPEKTAIS--SDGSGSAVHQNGPLENSSDEGSPWCK 597
+P+ SS S + SL+D + + S D + +H G + NSS++ + K
Sbjct: 652 STVPRFASS-SGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQI-NSSNQTKNFVK 709
Query: 598 DHKKSDLG--LEMGHCKVFME-SEDVGR 622
+K +G L++ + E E++G+
Sbjct: 710 VYKSGSVGRSLDISRFSSYHELREELGK 737
Score = 37 (18.1 bits), Expect = 8.8e-80, Sum P(4) = 8.8e-80
Identities = 16/62 (25%), Positives = 22/62 (35%)
Query: 542 LPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHKK 601
LPQQN Q S P++ A + + QNG L+ + K
Sbjct: 506 LPQQNMRQEVSNQPAGQQQQLQQPDQNAYLN----AFKMQNGHLQQWQQQSEMPSPSFMK 561
Query: 602 SD 603
SD
Sbjct: 562 SD 563
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 495 (179.3 bits), Expect = 3.2e-77, Sum P(4) = 3.2e-77
Identities = 100/206 (48%), Positives = 135/206 (65%)
Query: 22 LDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVE-----LPNF-NIPSMIPCRVT 75
++SQLWHACAG +V +P + S V YFPQGH E +++ +PN+ N+PS + C +
Sbjct: 20 INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLH 79
Query: 76 AIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASFAKTLTQSD 135
++ AD ETDEVYA++ L + N +D + D ++ + +E F KTLT SD
Sbjct: 80 SVTLHADTETDEVYAQMTLQPV--NKYDREALLASDMGLKLNRQPTE---FFCKTLTASD 134
Query: 136 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTG 195
+ GGFSVPR AE IFP LD+S +PP Q I+AKD+H W FRHIYRG P+RHLLTTG
Sbjct: 135 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTG 194
Query: 196 WSNFVNQKKLVAGDSIVFLRAENGDL 221
WS FV+ K+L AGDS++F+R E L
Sbjct: 195 WSVFVSTKRLFAGDSVLFVRDEKSQL 220
Score = 224 (83.9 bits), Expect = 3.2e-77, Sum P(4) = 3.2e-77
Identities = 47/111 (42%), Positives = 61/111 (54%)
Query: 295 NGQPFEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISS 354
N PF + + PRAS EFVV + A+ Q GMRF+M FETED + +MGT++
Sbjct: 258 NSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTG 316
Query: 355 VQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSP 405
+ DP+RW S WR LQV WDE RVS W +E V I ++ P
Sbjct: 317 ISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV--ITPFYICP 365
Score = 101 (40.6 bits), Expect = 3.2e-77, Sum P(4) = 3.2e-77
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 620 VGRTLDLSVLGSYEELYGKLANMFGIESA---EMFSN--VLYRDAAGSVKHTGDEPFSEF 674
VGR++D++ Y+EL LA MFGIE + S+ ++Y D + GD+P+ EF
Sbjct: 969 VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1028
Query: 675 LKTARRLTILT 685
+ + + IL+
Sbjct: 1029 VNCVQNIKILS 1039
Score = 41 (19.5 bits), Expect = 3.8e-58, Sum P(4) = 3.8e-58
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 376 DEPDLLQNVKRVSPWLVE 393
DE D+ KR PW+ E
Sbjct: 382 DELDMENAFKRAMPWMGE 399
Score = 39 (18.8 bits), Expect = 3.2e-77, Sum P(4) = 3.2e-77
Identities = 20/90 (22%), Positives = 29/90 (32%)
Query: 463 GLSSSDLHFNKLQSSLFPLGFQQLEHTTRPARVSSANFMSETGNSKNISCLLTMGNPTQS 522
G S S L Q S+ P G + + M+ L M N +Q
Sbjct: 552 GFSQSQLQ----QQSMLPTGAKMTHQNINSMGNKGLSQMTSFAQEMQFQQQLEMHNSSQL 607
Query: 523 FKDNIEVKTPHIILFGQLILPQQNSSQSCS 552
++ E + H + PQQ Q S
Sbjct: 608 LRNQQEQSSLHSLQQNLSQNPQQLQMQQQS 637
Score = 37 (18.1 bits), Expect = 1.5e-70, Sum P(4) = 1.5e-70
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 566 EKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDH 599
E +S DG +A+ + +D G+ W K H
Sbjct: 1042 EVQQMSLDGDLAAIPTTNQACSETDSGNAW-KVH 1074
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 487 (176.5 bits), Expect = 8.7e-76, Sum P(3) = 8.7e-76
Identities = 104/216 (48%), Positives = 139/216 (64%)
Query: 17 TGES-CLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEH--AKGNVE----LPNFNIPSM 69
TGE L+S+LWHACAG +V +P + S+V YFPQGH E A N E +PN+ PS+
Sbjct: 16 TGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNY--PSL 73
Query: 70 IP---CRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPAS 126
P C++ + AD ETDEVYA++ L L + + +D G+ S +P +
Sbjct: 74 HPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQ---EQKDPYLPAELGVP---SRQPTN 127
Query: 127 -FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRG 185
F KTLT SD + GGFSVPR AE +FP LDYS +PP Q ++A+D+H WKFRHI+RG
Sbjct: 128 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRG 187
Query: 186 TPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDL 221
P+RHLLTTGWS FV+ K+LVAGDS++F+ + L
Sbjct: 188 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQL 223
Score = 227 (85.0 bits), Expect = 8.7e-76, Sum P(3) = 8.7e-76
Identities = 52/119 (43%), Positives = 70/119 (58%)
Query: 299 FEVVYYPRASTPEFVVK-ASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQV 357
F + Y PRAS EFV+ A V+A + GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 323
Query: 358 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLP 416
DP RW NS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 324 LDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWP 380
Score = 107 (42.7 bits), Expect = 8.7e-76, Sum P(3) = 8.7e-76
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 577 SAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELY 636
S + ++G L++S + GS ++ +S+ + KV+ +S GR+LD+S SY EL
Sbjct: 774 SCIDESGFLQSSENLGS----ENPQSNTFV-----KVY-KSGSFGRSLDISKFSSYHELR 823
Query: 637 GKLANMFGIESA---EMFSN--VLYRDAAGSVKHTGDEPFSEFLKTARRLTILTDSGSDS 691
+LA MFG+E + S +++ D V GD+P+ EF+ + + IL+
Sbjct: 824 SELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQ 883
Query: 692 VGR 694
+G+
Sbjct: 884 MGK 886
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 496 (179.7 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 101/228 (44%), Positives = 140/228 (61%)
Query: 3 TVMDSAKDAMKKNPTGESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHA------K 56
T+++ K ++ T + ++S+LWHACAG +V +PQ+ S V+YF QGH E
Sbjct: 32 TLLEEMKLLKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRS 91
Query: 57 GNVELPNF-NIPSMIPCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGG 115
++PN+ N+PS + C+V + AD ++DE+YA++ L + S D F F G
Sbjct: 92 ATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSER-DVFPVPDF----G 146
Query: 116 ISNESSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGE 175
+ S F KTLT SD + GGFSVPR AE +FP LDYSA+PP Q ++ +D+H
Sbjct: 147 MLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHEN 206
Query: 176 VWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
W FRHIYRG P+RHLLTTGWS FV K+L AGDS++F+R E L V
Sbjct: 207 TWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMV 254
Score = 230 (86.0 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 49/100 (49%), Positives = 58/100 (58%)
Query: 295 NGQPFEVVYYPRASTPEFVVKASAVRAAM-QIQWCSGMRFKMAFETEDSSRISWFMGTIS 353
N PF + Y PRA EFV+ + R A+ Q GMRF M FETEDS + +MGTI
Sbjct: 290 NRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRR-YMGTIV 348
Query: 354 SVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE 393
+ DP+RWP S WR LQV WDEP RVSPW +E
Sbjct: 349 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 92 (37.4 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 565 PEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTL 624
P+ + + S + + L +S +GS W +K + KV ++ VGR++
Sbjct: 755 PDNSGGTGTSSSNVDFDDCSLRQNS-KGSSW----QKIATPRVRTYTKV-QKTGSVGRSI 808
Query: 625 DLSVLGSYEELYGKLANMFGIESAEMFSN-----VLYRDAAGSVKHTGDEPFSEFLKTAR 679
D++ YEEL + MFG+E ++Y D V GD+P+ EF+ R
Sbjct: 809 DVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVR 868
Query: 680 RLTILT 685
+ IL+
Sbjct: 869 CIRILS 874
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 497 (180.0 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
Identities = 101/226 (44%), Positives = 140/226 (61%)
Query: 7 SAKDAMKKNPTGE-SCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHA-----KGNVE 60
S+ + + TG S + S+LWHACAG + +P+ + V YFPQGHLE +E
Sbjct: 46 SSGSSSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLE 105
Query: 61 LPNFNIPSMIPCRVTAIKFMADAETDEVYARIRLIALKSNCF-----DDFEDVGFDGNGG 115
+P F++ I CRV ++ +A+ +TDEVY ++ L+ L+ + +++G +
Sbjct: 106 IPKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERN 165
Query: 116 ISNESSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGE 175
S+ P F KTLT SD + GGFSVPR AE F LDY + P Q ++AKD+HG
Sbjct: 166 GSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGV 225
Query: 176 VWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDL 221
WKFRHIYRG PRRHLLTTGWS FV+QK LV+GD+++FLR E G+L
Sbjct: 226 EWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGEL 271
Score = 211 (79.3 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
Identities = 65/201 (32%), Positives = 95/201 (47%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F V Y PRA+ EFV+ +++ C G RF+M FE +DS G ++ V
Sbjct: 312 FHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERRC-AGVVTGVCDL 370
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
DP RWPNS WR L V WDE + + +RVSPW ++ ++P HLS S R P+
Sbjct: 371 DPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSPR-----PKR 423
Query: 419 SDFSLINQLPTPSFTRNPLVTSSPFCCISDNI-PAGI-QGARHAQYGLSSSDLHFNKLQS 476
L++ P P NP+ F +++ P+ + QG + G +S F+ +
Sbjct: 424 PWAGLLDTTP-PG---NPITKRGGFLDFEESVRPSKVLQGQENI--GSASPSQGFDVMNR 477
Query: 477 SLFPLGFQQLEHTTRPARVSS 497
+ L F H P VSS
Sbjct: 478 RI--LDFAMQSHAN-PVLVSS 495
Score = 101 (40.6 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESA----EMFSNVLYRDAAGSVKHTG 667
KV + VGR +DLS L Y++L +L +F +E E +LY D+ + G
Sbjct: 669 KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVG 728
Query: 668 DEPFSEFLKTARRLTILT 685
D+P+ +F ++ + T
Sbjct: 729 DDPWHDFCNVVWKIHLYT 746
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 460 (167.0 bits), Expect = 8.9e-73, Sum P(3) = 8.9e-73
Identities = 99/209 (47%), Positives = 128/209 (61%)
Query: 22 LDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHA-----KGNV--ELPNFNIPSMIPCRV 74
L ++LW ACAG +V++P+ +VFYFPQGH+E +G V E+P FN+P I CRV
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 75 TAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASFAKTLTQS 134
++ A+ ETDEVYA+I L + D E D + + SF K LT S
Sbjct: 99 LSVTLKAEHETDEVYAQITLQPEE----DQSEPTSLDPP--LVEPAKPTVDSFVKILTAS 152
Query: 135 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTT 194
D + GGFSV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTT
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 195 GWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
GWS FV K+LVAGD+ VFLR E GDL V
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRV 241
Score = 183 (69.5 bits), Expect = 8.9e-73, Sum P(3) = 8.9e-73
Identities = 50/135 (37%), Positives = 73/135 (54%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDS-SRISWFMGTI-SSVQ 356
F V Y PR S +F++ + AM+ + GMR++M FE E+S RI F GTI S
Sbjct: 281 FVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTIIGSGD 336
Query: 357 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLP 416
++ +WP S WR LQ+ WDEP +Q +VSPW +E S P+ L+P +P +++ +
Sbjct: 337 LSS--QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFS--PSA-LTP-TPTQQQSKSK 390
Query: 417 EHSDFSLINQLPTPS 431
S I P S
Sbjct: 391 RSRPISEITGSPVAS 405
Score = 124 (48.7 bits), Expect = 8.9e-73, Sum P(3) = 8.9e-73
Identities = 44/124 (35%), Positives = 63/124 (50%)
Query: 566 EKTAISSDG--SGSAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRT 623
+K IS D S S P NSS+ SP K+ K+ KV M+ VGR
Sbjct: 475 DKQLISVDSNISDSTTKCQDP--NSSN--SP--KEQKQQTS--TRSRIKVQMQGTAVGRA 526
Query: 624 LDLSVLGSYEELYGKLANMFGIESAEMFSN----VLYRDAAGSVKHTGDEPFSEFLKTAR 679
+DL++L SY+EL +L MF IE E+ +++ D G GD+P++EF K A+
Sbjct: 527 VDLTLLRSYDELIKELEKMFEIEG-ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 585
Query: 680 RLTI 683
+L I
Sbjct: 586 KLFI 589
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 477 (173.0 bits), Expect = 4.5e-72, Sum P(3) = 4.5e-72
Identities = 95/211 (45%), Positives = 137/211 (64%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNV------ELPNFNIPSMIPC 72
E+ L +LWHACAG +V +P+ + +VFYFPQGH+E + + ++P +++PS + C
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 114
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASFAKTLT 132
RV + A+A+TDEVYA+I L+ ++N ++ + + + SF KTLT
Sbjct: 115 RVINVDLKAEADTDEVYAQITLLP-EANQ----DENAIEKEAPLPPPPRFQVHSFCKTLT 169
Query: 133 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLL 192
SD + GGFSV R A+ P LD S +PP Q ++AKD+H W+FRHI+RG PRRHLL
Sbjct: 170 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLL 229
Query: 193 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
+GWS FV+ K+LVAGD+ +FLR ENG+L V
Sbjct: 230 QSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Score = 237 (88.5 bits), Expect = 4.5e-72, Sum P(3) = 4.5e-72
Identities = 55/147 (37%), Positives = 74/147 (50%)
Query: 296 GQPFEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSV 355
G F V Y PR S EF+V +++ + GMRFKM FE E++ F GTI +
Sbjct: 297 GTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGI 355
Query: 356 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFS-PARKKLR 414
+ +DP RWP S WR L+V WDE + RVSPW VE PA+ P P R +
Sbjct: 356 EESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSN 415
Query: 415 L-PEHSDFSLINQLPTPSFTRNPLVTS 440
+ P D S++ + T +PL S
Sbjct: 416 IAPSSPDSSMLTREGTTKANMDPLPAS 442
Score = 99 (39.9 bits), Expect = 4.5e-72, Sum P(3) = 4.5e-72
Identities = 36/149 (24%), Positives = 63/149 (42%)
Query: 542 LPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGS-AVHQNGPLENSSDEGSPWCKDHK 600
+ Q+N+ +G T + S P+ +S GS + + + +P KD
Sbjct: 672 MSQRNNLNDAAGLTQIAS-----PKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKD-A 725
Query: 601 KSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN----VLY 656
++ KV + +GR++DLS +YEEL +L +F M ++Y
Sbjct: 726 QTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVY 785
Query: 657 RDAAGSVKHTGDEPFSEFLKTARRLTILT 685
D + GD+P+ EF R++ I T
Sbjct: 786 TDEENDMMLVGDDPWQEFCCMVRKIFIYT 814
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 470 (170.5 bits), Expect = 8.3e-72, Sum P(3) = 8.3e-72
Identities = 101/225 (44%), Positives = 135/225 (60%)
Query: 7 SAKDAMKKNPTG--ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNV----- 59
+A + P G L +LWHACAG +V +P+ +V+YFP+GH+E + ++
Sbjct: 2 AASNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 60 -ELPNFNIPSMIPCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISN 118
++P+FN+PS I C+V I+ A+ ETDEVYA+I L+ D E D +
Sbjct: 62 QQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPE----LDQSEPTSPDAP--VQE 115
Query: 119 ESSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWK 178
SF KTLT SD + GGFSV R A+ P LD S +PP Q ++A D+H W
Sbjct: 116 PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWH 175
Query: 179 FRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
FRHI+RG PRRHLLTTGWS FV+ KKLVAGD+ +FLR EN +L V
Sbjct: 176 FRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRV 220
Score = 199 (75.1 bits), Expect = 8.3e-72, Sum P(3) = 8.3e-72
Identities = 59/159 (37%), Positives = 75/159 (47%)
Query: 260 YMREDENKSSRRNSSSDLRGRVRAESVTEXXXXXXNGQPFEVVYYPRASTPEFVVKASAV 319
+MR+ N S SS + V A + G F V Y PR S EF+V +
Sbjct: 225 HMRQQTNIPSSVISSHSMHIGVLATAA----HAITTGTIFSVFYKPRTSRSEFIVSVNRY 280
Query: 320 RAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPD 379
A + GMRFKM FE E++ F GTI VQ W +S WR L+V WDEP
Sbjct: 281 LEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS 339
Query: 380 LLQNVKRVSPWLVE-LVSN-IPAIHLSPFSPARKKLRLP 416
+ +RVSPW +E LV+N P+ P P R K P
Sbjct: 340 SVFRPERVSPWELEPLVANSTPSSQPQP--PQRNKRPRP 376
Score = 123 (48.4 bits), Expect = 8.3e-72, Sum P(3) = 8.3e-72
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 536 LFGQLILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSA---VHQNGPLENSSDEG 592
LFG ++ N + S ++ +++ P + G S ++Q+ S D
Sbjct: 467 LFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPE 526
Query: 593 SPWCKDHKKSDLGLEMGHC-KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMF 651
+ ++S ++ C KV M+ VGR +DL+ YE+L+ KL MF I+ +
Sbjct: 527 KSSLRSPQESQ-SRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLE 585
Query: 652 SN----VLYRDAAGSVKHTGDEPFSEFLKTARRLTILT 685
S V+Y D + GD+P++EF R++ I T
Sbjct: 586 STKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYT 623
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 454 (164.9 bits), Expect = 7.8e-71, Sum P(3) = 7.8e-71
Identities = 98/209 (46%), Positives = 128/209 (61%)
Query: 22 LDSQLWHACAGGMVQMPQINSKVFYFPQGHLEH--AKGNV-----ELPNFNIPSMIPCRV 74
L ++LW CAG +V++P+ +VFYFPQGH+E A N E+P F++P I CRV
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81
Query: 75 TAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASFAKTLTQS 134
+ A+ ETDEVYA+I L + D E D I + ++ SF K LT S
Sbjct: 82 LDVTLKAEHETDEVYAQITLQPEE----DQSEPTSLDPP--IVGPTKQEFHSFVKILTAS 135
Query: 135 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTT 194
D + GGFSV R A P LD + P Q ++ +D+HG W+F+HI+RG PRRHLLTT
Sbjct: 136 DTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTT 195
Query: 195 GWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
GWS FV+ K+LVAGD+ VFLR ENGDL V
Sbjct: 196 GWSTFVSSKRLVAGDAFVFLRGENGDLRV 224
Score = 174 (66.3 bits), Expect = 7.8e-71, Sum P(3) = 7.8e-71
Identities = 49/116 (42%), Positives = 64/116 (55%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDS-SRISWFMGTISSVQV 357
F V Y PR S +F+V + A++ + G RF+M FE E+S RI F GTI V
Sbjct: 264 FVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERI--FTGTI--VGS 317
Query: 358 AD-PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFS-PARK 411
D +WP S WR LQV WDEP +Q +VSPW +E P + SP S PA++
Sbjct: 318 GDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
Score = 123 (48.4 bits), Expect = 7.8e-71, Sum P(3) = 7.8e-71
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ VGR +DL++L SY+EL +L MF I+ + + V++ D G + GD
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGD 552
Query: 669 EPFSEFLKTARRLTILTDSGSDSV 692
+P++EF K A+++ I + SD V
Sbjct: 553 DPWNEFCKMAKKIFIYS---SDEV 573
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 504 (182.5 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 101/208 (48%), Positives = 133/208 (63%)
Query: 18 GESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNVELPNFNIPSMIPCRVTAI 77
G CL+ LWHACAG ++ +P+ S V YFPQGHLE A + + +P + CR+ +
Sbjct: 49 GGVCLE--LWHACAGPLISLPKRGSLVLYFPQGHLEQAP-DFSAAIYGLPPHVFCRILDV 105
Query: 78 KFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISN----ESSEKPASFAKTLTQ 133
K A+ TDEVYA++ L+ + + D +GG + + S P F KTLT
Sbjct: 106 KLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTA 165
Query: 134 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLT 193
SD + GGFSVPR AE FP LDYS P Q +LA+D+HG W+FRHIYRG PRRHLLT
Sbjct: 166 SDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLT 225
Query: 194 TGWSNFVNQKKLVAGDSIVFLRAENGDL 221
TGWS FVN+KKLV+GD+++FLR ++G L
Sbjct: 226 TGWSAFVNKKKLVSGDAVLFLRGDDGKL 253
Score = 192 (72.6 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 53/168 (31%), Positives = 74/168 (44%)
Query: 240 SVGWXXXXXXXXXXXXXXXXYMREDENK---SSRRNS--------SSDLRGRVRAESVTE 288
+ GW ++R D+ K RR S S+ + + +E
Sbjct: 225 TTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSE 284
Query: 289 XXXXXXNGQPFEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSS-RISW 347
F + Y P+AS F++ A + +C GMRFK E+ED+S R S
Sbjct: 285 VAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRS- 343
Query: 348 FMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLQN--VKRVSPWLVE 393
G IS + DPIRWP S WR L V WD D++ N +RVSPW +E
Sbjct: 344 -PGIISGISDLDPIRWPGSKWRCLLVRWD--DIVANGHQQRVSPWEIE 388
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 453 (164.5 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 99/216 (45%), Positives = 128/216 (59%)
Query: 15 NPTGESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGN---VEL----PNFNIP 67
N GE D +LW CAG +V +PQ +V+YFPQGH+E + + V+L P F +P
Sbjct: 3 NRGGEYLYD-ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLP 61
Query: 68 SMIPCRVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASF 127
I C V + A+ +TDEVYA+I LI + + D + K SF
Sbjct: 62 PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEV-----DEPMSPDPSPPELQRPKVHSF 116
Query: 128 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTP 187
+K LT SD + GGFSV R A P LD + + P Q ++A+DVHG WKF+HI+RG P
Sbjct: 117 SKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQP 176
Query: 188 RRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
RRHLLTTGWS FV K+LVAGD+ VFLR ENG+L V
Sbjct: 177 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRV 212
Score = 185 (70.2 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 57/172 (33%), Positives = 82/172 (47%)
Query: 301 VVYY-PRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD 359
+VYY PR S +F++ + AM ++ GMRFKM FE EDS + GT+ V+
Sbjct: 253 IVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKDCS 309
Query: 360 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEHS 419
P W +S WR L+V WDEP + +VSPW +E N + P S K R + S
Sbjct: 310 P-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENV---PKSVMLKNKRPRQVS 365
Query: 420 DFSLINQLPTPSFTRNPLVTSS-PFC--CISDNIPAGIQGARHAQYGLSSSD 468
+ S ++ T S + ++T F CI+ + Q R A SD
Sbjct: 366 EVSALDVGITASNLWSSVLTQPHEFAQSCITSQWSSPQQCHRDANEDAKKSD 417
Score = 112 (44.5 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 591 EGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEM 650
EGSP K+ + KV M+ VGR +DL+ L Y EL + +F I+
Sbjct: 508 EGSP--KEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELR 565
Query: 651 FSN---VLYRDAAGSVKHTGDEPFSEFLKTARRLTI 683
N +++ D G + GD+P+ EF +R+ I
Sbjct: 566 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 601
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 396 (144.5 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 92/213 (43%), Positives = 120/213 (56%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLE--HAKGNVEL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ V+YFPQG++E A EL P ++PS + C
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPA--SFAKT 130
RV AI + +DE+YA I L+ D V +E+ +P SF K
Sbjct: 81 RVIAIHLKVENNSDEIYAEITLMP-------DTTQVVIP----TQSENRFRPLVNSFTKV 129
Query: 131 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRH 190
LT SD + GGFSVP+ A P LD S P Q ILA D+H W+FRH YRGTP+RH
Sbjct: 130 LTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRH 189
Query: 191 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
LTTGW+ F+ KKLV GD IVF+R E G+L V
Sbjct: 190 SLTTGWNEFITSKKLVKGDVIVFVRGETGELRV 222
Score = 173 (66.0 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 51/137 (37%), Positives = 71/137 (51%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F VVY PR+S +F+V A+ ++ G RF M FE +D S +F GTI V
Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDF 318
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
P W S WR L+V WDE +VSPW +E + +PA+++ P S K RL E
Sbjct: 319 SP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV-PRSSLLKNKRLREV 374
Query: 419 SDF-SLINQLPTPSFTR 434
++F S + L P T+
Sbjct: 375 NEFGSSSSHLLPPILTQ 391
Score = 110 (43.8 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ +GR +DLSVL Y++L +L +F I+ N + + D+ G GD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGD 574
Query: 669 EPFSEFLKTARRLTI 683
+P+ EF K +++ I
Sbjct: 575 DPWPEFCKMVKKILI 589
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 409 (149.0 bits), Expect = 4.1e-56, Sum P(3) = 4.1e-56
Identities = 94/213 (44%), Positives = 121/213 (56%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNV--EL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ KV+YFPQGH+E + + EL P ++PS + C
Sbjct: 21 KSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPA--SFAKT 130
RV AI + +DE YA I L+ D V NE+ +P SF K
Sbjct: 81 RVIAIHLKVENNSDETYAEITLMP-------DTTQVVIP----TQNENQFRPLVNSFTKV 129
Query: 131 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRH 190
LT SD + GGF VP+ A P LD S P Q +LA D+HG W+F H YRGTP+RH
Sbjct: 130 LTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRH 189
Query: 191 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
LLTTGW+ F KKLVAGD IVF+R E G+L V
Sbjct: 190 LLTTGWNAFTTSKKLVAGDVIVFVRGETGELRV 222
Score = 159 (61.0 bits), Expect = 4.1e-56, Sum P(3) = 4.1e-56
Identities = 51/137 (37%), Positives = 69/137 (50%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F VVY PR+S +F+V A+ ++ G RF M E +D S F GTI V
Sbjct: 262 FTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCF-GTIIGVSDF 318
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
P W S WR L+V WDE K+VSPW +E + +PAI++ P S K RL E
Sbjct: 319 SP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINV-PRSFLLKNKRLREV 374
Query: 419 SDF-SLINQLPTPSFTR 434
++ S + L P T+
Sbjct: 375 NEIGSSSSHLLPPILTQ 391
Score = 98 (39.6 bits), Expect = 4.1e-56, Sum P(3) = 4.1e-56
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ +GR +DLSVL Y++L +L +F I+ N + + D+ GD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGD 574
Query: 669 EPFSEFLKTARRLTI 683
+P+ EF +++ I
Sbjct: 575 DPWPEFCNMVKKIFI 589
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 401 (146.2 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 93/213 (43%), Positives = 121/213 (56%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLE--HAKGNVEL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ K++YFPQG++E A EL P ++PS + C
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPA--SFAKT 130
RV AI+ + +DE YA I L+ D V NE+ +P SF K
Sbjct: 81 RVIAIQLKVENNSDETYAEITLMP-------DTTQVVIP----TQNENQFRPLVNSFTKV 129
Query: 131 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRH 190
LT SD + GGF VP+ A P LD S P Q +LA D+HG W+F H YRGTP+RH
Sbjct: 130 LTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRH 187
Query: 191 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
LLTTGW+ F KKLVAGD IVF+R E G+L V
Sbjct: 188 LLTTGWNAFTTSKKLVAGDVIVFVRGETGELRV 220
Score = 159 (61.0 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 49/137 (35%), Positives = 69/137 (50%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F VVY PR+S +F+V A+ ++ G RF M FE +D S +F GTI V
Sbjct: 260 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDF 316
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
P W S WR L+V WDE +VSPW +E + +PA+++ P K RL E
Sbjct: 317 SP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNV-PRPSLLKNKRLREV 372
Query: 419 SDF-SLINQLPTPSFTR 434
++ S + L P T+
Sbjct: 373 NEIGSSSSHLLPPILTQ 389
Score = 93 (37.8 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ + R +DLSVL Y++L +L +F ++ N + + D+ GD
Sbjct: 513 KVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGD 572
Query: 669 EPFSEFLKTARRLTILTDSG 688
+P+ EF +++ I G
Sbjct: 573 DPWPEFCNMVKKILIFKRGG 592
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 377 (137.8 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 89/211 (42%), Positives = 114/211 (54%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLE--HAKGNVEL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ V+YFPQG++E A EL P ++PS + C
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPASFAKTLT 132
RV AI + +DE YA I L+ D V N+ SF K LT
Sbjct: 81 RVIAIHLKVENNSDETYAEITLMP-------DTTQVVIPTQS--ENQFRPLVNSFTKVLT 131
Query: 133 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLL 192
SD + GGF VP+ A P L P Q +LAKD+HG W+FRH YRGTP+RH L
Sbjct: 132 ASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSL 187
Query: 193 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
TTGW+ F KKLV GD IVF+R E G+L V
Sbjct: 188 TTGWNEFTTSKKLVKGDVIVFVRGETGELRV 218
Score = 168 (64.2 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 49/134 (36%), Positives = 66/134 (49%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F VVY P + +F+V AM ++ G RF M FE +D S +F GTI V
Sbjct: 258 FIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF-GTIIGVNDF 316
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
P W S WR L+V WDE +VSPW +E + + A+++ P S K RL E
Sbjct: 317 SP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMS--ALNV-PRSSLLKNKRLREV 372
Query: 419 SDFSL-INQLPTPS 431
++F I QL S
Sbjct: 373 NEFGQEIGQLSVAS 386
Score = 108 (43.1 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ +GR +DLSVL Y++L +L +F ++ N + + D+ G GD
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGD 558
Query: 669 EPFSEFLKTARRLTI 683
+P+ EF K +++ I
Sbjct: 559 DPWPEFCKMVKKILI 573
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 409 (149.0 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 95/213 (44%), Positives = 120/213 (56%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLE--HAKGNVEL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ KV+YFPQGH+E A EL P + PS + C
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPA--SFAKT 130
RV AI+ + +DE YA I L+ D V N++ +P SF K
Sbjct: 81 RVIAIQLKVENNSDETYAEITLMP-------DTTQVVIP----TQNQNQFRPLVNSFTKV 129
Query: 131 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRH 190
LT SD + GGFSVP+ A P LD S P Q ILA D+HG W+FRHIYRGT +RH
Sbjct: 130 LTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRH 189
Query: 191 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
LLT GW+ F KKLV GD IVF+R E G+L V
Sbjct: 190 LLTIGWNAFTTSKKLVEGDVIVFVRGETGELRV 222
Score = 141 (54.7 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 45/136 (33%), Positives = 64/136 (47%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 358
F VVY PR+S +F+V + ++ G RF M FE +D S F GTI V
Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSF-GTIIGVSDF 318
Query: 359 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNIPAIHLSPFSPARKKLRLPEH 418
P W S WR L+V WDE +VSPW +E ++ + S F ++ + E
Sbjct: 319 SP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLKNKRSREVNEI 377
Query: 419 SDFSLINQLPTPSFTR 434
S + LP P+ T+
Sbjct: 378 GSSSS-HLLP-PTLTQ 391
Score = 85 (35.0 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ +GR +DLSVL Y++L +L +F ++ N + + + G+
Sbjct: 514 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGE 573
Query: 669 EPFSEFLKTARRLTI 683
+P+ EF +++ I
Sbjct: 574 DPWPEFCNMVKKIFI 588
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 375 (137.1 bits), Expect = 5.2e-47, Sum P(3) = 5.2e-47
Identities = 84/207 (40%), Positives = 120/207 (57%)
Query: 25 QLWHACAGGMVQMPQINSKVFYFPQGHLEHAKGNV--EL----PNFNIPSMIPCRVTAIK 78
+LW+ CAG + +P+ KV+YFPQGH+E + + EL P F++PS + CRV AI
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 79 FMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPAS--FAKTLTQSDA 136
D TDEVYA+I L+ D +V N + + +P F+K LT SD
Sbjct: 85 RKVDKNTDEVYAQISLMP-------DTTEV-MTHN---TTMDTRRPIVYFFSKILTASDV 133
Query: 137 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTG- 195
+ GG +P+ A FP LD S Q ++AKD++G+ W F+H++RGTP+RH+ T+G
Sbjct: 134 SLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 193
Query: 196 -WSNFVNQKKLVAGDSIVFLRAENGDL 221
WS F K+L+ GD V LR ENG+L
Sbjct: 194 GWSVFATTKRLIVGDIFVLLRGENGEL 220
Score = 114 (45.2 bits), Expect = 5.2e-47, Sum P(3) = 5.2e-47
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 334 KMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE 393
+M FE +D S + GTI V P W +S WR L+V WDE +VSPW +E
Sbjct: 269 RMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
Query: 394 LVSNIPAIHLSPFSPARKK--LRLPE 417
+ IP+ +S S +KK L+L E
Sbjct: 327 HL--IPSSDISQSSLKKKKHWLQLNE 350
Score = 94 (38.1 bits), Expect = 5.2e-47, Sum P(3) = 5.2e-47
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSN---VLYRDAAGSVKHTGD 668
KV M+ + R +DL+ + Y +L KL +F ++ N +++ + G+ GD
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGD 496
Query: 669 EPFSEFLKTARRLTI 683
+P+ EF A+R+ I
Sbjct: 497 DPWPEFCNMAKRIFI 511
Score = 37 (18.1 bits), Expect = 5.5e-39, Sum P(3) = 5.5e-39
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 453 GIQGARHAQYGLSSSDLHFNKLQ 475
GI+ A+H Q + SS + N +Q
Sbjct: 223 GIRRAKHQQGHIPSSVISANCMQ 245
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 354 (129.7 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 88/213 (41%), Positives = 112/213 (52%)
Query: 19 ESCLDSQLWHACAGGMVQMPQINSKVFYFPQGHLE--HAKGNVEL----PNFNIPSMIPC 72
+S + QLW CAG + +P++ KV+YFPQGH+E A EL PN ++PS + C
Sbjct: 21 KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQC 80
Query: 73 RVTAIKFMADAETDEVYARIRLIALKSNCFDDFEDVGFDGNGGISNESSEKPA--SFAKT 130
RV AI + +DE Y I L+ D V NE+ +P SF K
Sbjct: 81 RVIAIHLKVENNSDETYVEITLMP-------DTTQVVIP----TENENQFRPIVNSFTKV 129
Query: 131 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYRGTPRRH 190
LT SD + G FSVP A P LD S P Q ++A D+HG W+F+H YR PR
Sbjct: 130 LTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD 188
Query: 191 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCV 223
TTGW+ F KKLV GD IVF R E G+L V
Sbjct: 189 --TTGWNAFTTSKKLVVGDVIVFARGETGELRV 219
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 113 NGGISNESSEKP-ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILA-- 169
N G+S A F K +T SD +P++ AE FP L S+ V+ +L
Sbjct: 173 NDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFP-LP-SSNVSVKGVLLNF 230
Query: 170 KDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGD 220
+DV+G+VW+FR+ Y + + ++LT GWS FV +K L AGD + F R+ D
Sbjct: 231 EDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQD 281
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 127 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILA--KDVHGEVWKFRHIYR 184
F KT+T SD +P++ AE FP + V+ +L +DV+G+VW+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 185 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGD 220
+ + ++LT GWS FV +K+L AGD I F R+ + D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 156 (60.0 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 122 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILA--KDVHGEVWKF 179
EK A F K LT SD +P+ AE FP +A+ + +L +D G+ W+F
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRF 92
Query: 180 RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR 215
R+ Y + + ++LT GWS +V +K L AGD ++F R
Sbjct: 93 RYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR 128
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 117 SNESSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEV 176
+ E +++ F K +T SD +P+ AE FP LD S+ + +D+ G+
Sbjct: 25 AREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKS 83
Query: 177 WKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGD 220
W+FR+ Y + + +++T GWS FV KKL AGD + F R GD
Sbjct: 84 WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCV-GD 126
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 44/123 (35%), Positives = 58/123 (47%)
Query: 573 DGSGSAVHQNGPLENSSDE--GSPWCKD-HKKSDLGLEMGHCKVFMESEDVGRTLDLSVL 629
+G G +G + N + G P K H++ D G G+ KV ME +GR LDLS+L
Sbjct: 60 NGRGGDGDSDGEMGNKRRKLVGWPPVKCLHRRRDGGCGGGYVKVKMEGLAIGRKLDLSIL 119
Query: 630 GSYEELYGKLANMFGIESAEMFSN--------VLYRDAAGSVKHTGDEPFSEFLKTARRL 681
GSY EL L MF + E + V Y D G GD P+ F K+ +RL
Sbjct: 120 GSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRL 179
Query: 682 TIL 684
IL
Sbjct: 180 KIL 182
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 122 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRH 181
EK F K +T SD +P+ AE FP LD S + +D +G++W+FR+
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRY 109
Query: 182 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR 215
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 110 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 120 SSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILA-KDVHGEVWK 178
S + F K LT SD +P+ AE FP D T+L +D +G++W+
Sbjct: 29 SERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNG----TVLDFQDKNGKMWR 84
Query: 179 FRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR 215
FR+ Y + + +++T GWS FV +KKL AGD++ F R
Sbjct: 85 FRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 127 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPV-QTILA--KDVHGEVWKFRHIY 183
F K +T SD +P+ AE FP L S P V + +L +DV+G+VW+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LP-SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 184 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRA 216
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 117 SNESSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILA--KDVHG 174
++ S E+ F K +T SD +P+ AE FP + + + +L +D G
Sbjct: 13 ASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSG 72
Query: 175 EVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR 215
W+FR+ Y + + +++T GWS FV KKL AGD + F R
Sbjct: 73 NSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 145 (56.1 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 36/101 (35%), Positives = 52/101 (51%)
Query: 127 FAKTLTQSDANNGGGFSVPRYCAETIFP----RLDYSAEP-PVQTILA--KDVHGEVWKF 179
F KT+T SD +P+ AE FP P P + +L +D G+VW+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 180 RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGD 220
R+ Y + + ++LT GWS FV +K L AGD + F R+ D
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 295
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 117 (46.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 31/77 (40%), Positives = 40/77 (51%)
Query: 612 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIE----SAEMFSNVL-YRDAAGSVKHT 666
KV+ME +GR LDL V YE L L++MF + + +VL Y D G
Sbjct: 76 KVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMMV 135
Query: 667 GDEPFSEFLKTARRLTI 683
GD P+ FL+T RRL I
Sbjct: 136 GDIPWDMFLETVRRLKI 152
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/107 (31%), Positives = 51/107 (47%)
Query: 123 KPASFAKTLTQSDANNGGGFSVPRYCAETIFP---------RLDYSAEPPVQTILAKDVH 173
K + F K+LT SD +P+ AE FP D S+ + +D
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 174 GEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGD 220
G+ W+FR+ Y + + ++LT GWS FV K+L GD +VF + D
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGD-VVFFQRHRSD 147
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 121 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY-----SAEPPVQT----ILA-K 170
+++ + F K+LT SD +P+ AE FP + S + T +L+ +
Sbjct: 23 AQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFE 82
Query: 171 DVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDL 221
D G+ WKFR+ Y + + ++LT GWS +V K L AGD +VF + DL
Sbjct: 83 DESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGD-VVFFQRHRFDL 132
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 137 (53.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 299 FEVVYYPRASTPEFVVKASAVRAAMQIQWC-SGMRFKMAFETEDSSRISWFMGTISSVQV 357
F V Y + P+++V AS VR +M W RF+M + W+ GTI +
Sbjct: 1349 FYTVIYHVSDIPDYLVLASKVRKSMLTDWTVPNKRFRMFYPAS-----GWYNGTIIEISD 1403
Query: 358 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE 393
+DP+ +PNSPW ++V WD+ + RV+ W ++
Sbjct: 1404 SDPL-FPNSPWENIKVLWDDTE---EEDRVNYWEID 1435
Score = 52 (23.4 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 38 PQINSKVFYFPQGHLEH 54
PQ+ +FYF QGH ++
Sbjct: 1217 PQVGDFIFYFYQGHTKY 1233
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 489 TTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNI-EVKTPHI 534
TT ++ + N+ N + N +FKDNI +K ++
Sbjct: 1670 TTSNTTTTTTTTTETSNNNNNNNNNNNNNNNNNNFKDNILRIKIQYV 1716
Score = 37 (18.1 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 543 PQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEG 592
P QN+ Q +T VN+ ++ N +++ + + + N N+S G
Sbjct: 1479 PIQNNQQLSINNTNVNNNNNNNNNNNNNNNNNNNNNNNNNN--NNNSLNG 1526
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 123 (48.4 bits), Expect = 0.00063, P = 0.00063
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 127 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIY--R 184
F KTL+ SDA G +P+ CAE FP + S P++ +DV G W F+ Y
Sbjct: 295 FEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKI---QDVRGREWTFQFRYWPN 351
Query: 185 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENG 219
R ++L G + + L AGD++ F R + G
Sbjct: 352 NNSRMYVLE-GVTPCIQSMMLQAGDTVTFSRVDPG 385
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 111 (44.1 bits), Expect = 0.00066, P = 0.00066
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 609 GHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESA------EMFSN--VLYRDAA 660
G+ KV M+ VGR + + GSY L +L +MFG++S +M S ++YRD
Sbjct: 93 GYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVYRDEE 152
Query: 661 GSVKHTGDEPFSEFLKTARRLTI 683
G ++ GD P++EF+++ RL I
Sbjct: 153 GLWRNAGDVPWNEFIESVERLRI 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 694 659 0.00097 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 627 (67 KB)
Total size of DFA: 363 KB (2180 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.80u 0.13s 54.93t Elapsed: 00:00:03
Total cpu time: 54.81u 0.13s 54.94t Elapsed: 00:00:03
Start: Tue May 21 01:37:58 2013 End: Tue May 21 01:38:01 2013