Query 005483
Match_columns 694
No_of_seqs 182 out of 2148
Neff 9.9
Searched_HMMs 13730
Date Tue Mar 26 18:27:01 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005483.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1990-1993//hhsearch_scop/005483hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bw3a2 c.55.3.12 (A:163-609) 100.0 0 0 389.6 33.7 431 190-688 2-446 (447)
2 d2ct5a1 g.37.1.6 (A:8-67) Zinc 98.3 4.2E-08 3E-12 68.4 1.1 51 40-95 1-55 (60)
3 d2bw3a1 a.270.1.1 (A:79-162) T 96.9 0.00068 4.9E-08 40.0 5.0 64 129-192 10-84 (84)
4 d1x6ha2 g.37.1.1 (A:8-43) Tran 67.9 1.7 0.00013 17.0 2.7 29 54-90 5-33 (36)
5 d2ct1a2 g.37.1.1 (A:8-43) Tran 67.8 1.2 8.6E-05 18.1 1.9 30 54-91 5-34 (36)
6 d1srka_ g.37.1.1 (A:) Zinc fin 63.8 2.3 0.00017 16.2 2.7 29 53-90 3-31 (35)
7 d2epsa1 g.37.1.1 (A:408-446) P 58.3 3.2 0.00023 15.2 2.6 29 56-92 4-32 (39)
8 d2adra1 g.37.1.1 (A:102-130) A 50.9 4.1 0.0003 14.5 2.2 22 58-87 3-24 (29)
9 d1bboa2 g.37.1.1 (A:29-57) Enh 50.7 4.2 0.0003 14.4 2.7 25 58-90 2-26 (29)
10 d2czra1 c.52.4.1 (A:1-218) TBP 45.6 5 0.00036 13.9 3.4 46 39-94 98-173 (218)
11 d1p7aa_ g.37.1.1 (A:) Kruppel- 42.7 5.5 0.0004 13.6 1.8 26 54-87 8-33 (37)
12 d2cota2 g.37.1.1 (A:7-44) Zinc 42.6 5.5 0.0004 13.6 2.1 26 54-87 9-34 (38)
13 d1x6ea1 g.37.1.1 (A:8-40) Zinc 42.3 5.6 0.00041 13.6 2.3 26 54-87 4-29 (33)
14 d1sp1a_ g.37.1.1 (A:) Transcri 41.5 5.6 0.00041 13.6 1.7 23 57-87 2-24 (29)
15 d2drpa1 g.37.1.1 (A:103-139) T 40.9 5.8 0.00043 13.4 2.5 31 54-92 5-35 (37)
16 d1a1ia2 g.37.1.1 (A:132-159) Z 40.8 5.9 0.00043 13.4 1.9 23 57-87 3-25 (28)
17 d1yuja_ g.37.1.1 (A:) GAGA fac 38.3 5.7 0.00041 13.5 1.3 28 55-90 22-49 (54)
18 d1klra_ g.37.1.1 (A:) ZFY {Hum 30.4 8.5 0.00062 12.3 1.6 27 58-92 3-29 (30)
19 d1ncsa_ g.37.1.1 (A:) SWI5 zin 27.3 9.6 0.0007 12.0 1.7 26 54-87 15-42 (47)
20 d2glia5 g.37.1.1 (A:229-257) F 25.4 10 0.00075 11.8 2.3 27 58-90 3-29 (29)
21 d1x6ea2 g.37.1.1 (A:41-66) Zin 24.9 11 0.00077 11.7 2.0 22 58-87 3-24 (26)
22 d1zr9a1 g.37.1.4 (A:28-94) Zin 22.2 11 0.00081 11.6 0.5 29 54-90 12-40 (67)
23 d2glia3 g.37.1.1 (A:168-197) F 21.7 12 0.00089 11.3 2.1 22 58-87 3-26 (30)
No 1
>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=100.00 E-value=0 Score=389.62 Aligned_cols=431 Identities=17% Similarity=0.250 Sum_probs=313.7
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCC-CCCEEEEEEEEEEECCCCEEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHCCCC-C
Q ss_conf 999999961678327732031003-883278999998828854254588854407-9994458999999998732786-6
Q 005483 190 QRLLNFISGIHGRVNLALDLWSSN-QSVGYAVLTGHFIDGDWNLHHRVLNVVMVP-SPDSDVAFNQALASCLSDWRLE-N 266 (694)
Q Consensus 190 ~~i~~~l~~~~~~~sl~~D~wt~~-~~~~~l~v~~~~i~~~~~~~~~~L~~~~~~-~~~t~~~i~~~i~~vl~~~~i~-~ 266 (694)
.+|++.+.. ..+|+++|+||+. ....||+|++||++ ++.+++++|++.++. +.|||++|++.|.+++.+|||+ .
T Consensus 2 ~~~k~~~~~--~~~s~~~D~Wts~~~~~~~l~v~~~yi~-~~~~~~~~L~~~~~~~~~~tg~~i~~~l~~~l~~~~i~~~ 78 (447)
T d2bw3a2 2 REIKSAVEK--DGASATIDLWTDNYIKRNFLGVTLHYHE-NNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDL 78 (447)
T ss_dssp HHHHHHHHT--TCCEEEEEEEEETTTTEEEEEEEEEEEE-TTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHC--CCEEEEEEEECCCCCCEEEEEEEEEEEE-CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 258999971--7979999710379988379999999987-8835689999998279998399999999999998499863
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCHHH
Q ss_conf 47899605898866799989953123798643672223401589987999988733---128999999876874249179
Q 005483 267 KLLTLTLDRSFSNETINGNLRGFLSVKNPFMLNCQLIKGNCYARVISRLAQDALGA---IWETVDKIRASVKYVKTSDTH 343 (694)
Q Consensus 267 ki~~i~~D~a~~n~~~~~~l~~~l~~~~~~~~~~~~~~i~C~~H~lnl~~~~~l~~---i~~~l~~~~~~~~~~~~s~~~ 343 (694)
+++++++||++||. ..+ ....+++|++|.||+++++++.. +...+.+++.++.+|+.++.+
T Consensus 79 ~~~~~~~D~a~n~~-------~~~---------~~~~~i~C~aH~Lnl~v~d~~~~~~~~~~~~~~~~~i~~~~~~s~~~ 142 (447)
T d2bw3a2 79 SSIKFVTDRGANVV-------KSL---------ANNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQ 142 (447)
T ss_dssp TTCEEEECCCHHHH-------HHT---------TTSEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCG
T ss_pred EEEEEECCCCHHHH-------HHH---------HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999748707667-------776---------00443533655522566888862189999999999999998767999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999852989997523578865334999899998668998677521987766899986699999999999999999
Q 005483 344 EEKFLELKERLQVPSTKELFIDDQTKWNTTYHMLVAAHELKEVFACLETFDPDYKIATPTMDDWKQVEILCTYLKYFFDA 423 (694)
Q Consensus 344 ~~~l~~~~~~~~~~~~~~l~~~~~tRW~S~~~~l~~~l~~~~~i~~~~~~~~~~~~~~l~~~~w~~l~~l~~iL~pf~~~ 423 (694)
... ...++.+++|||.|++.|+.++++++..+..+....... ..++..+|..++.+..+|+||..+
T Consensus 143 ~~~------------~~~l~~~~~trW~s~~~~l~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~ 208 (447)
T d2bw3a2 143 HRL------------RSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGET--QRIVHINKSIIQTMVNILDGFERI 208 (447)
T ss_dssp GGG------------CCCCCCSSCGGGCHHHHHHHHHHHTHHHHHHHHHHTTCG--GGTTTCCHHHHHHHHHHHHTTHHH
T ss_pred HHH------------HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 987------------301577776623439999999999999999999842533--467717678999999999877888
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHEECCCCHHHHHHHHHH
Q ss_conf 8332499966535379999999999998823989578975899999999976200-003222300067400466887522
Q 005483 424 ANILTSPTYPTASVFYHEVSKIQAELTQAAMSEEPFTSYLTKPLKERFDEYWKDC-FLVLAIAVVIDPRFKMKLIEFSFS 502 (694)
Q Consensus 424 ~~~l~~~~~~~~~~v~~~i~~l~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~A~~LdPr~k~~~~~~~~~ 502 (694)
+..++....++++.++|.+..+...+... .........+...+...++.||.+. ...+.+|.+|||+++......
T Consensus 209 ~~~l~~~~~~t~~~v~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~p~~~~~~~~~--- 284 (447)
T d2bw3a2 209 FKELQTCSSPSLCFVVPSILKVKEICSPD-VGDVADIAKLKVNIIKNVRIIWEENLSIWHYTAFFFYPPALHMQQEK--- 284 (447)
T ss_dssp HHHHTCSSSCCGGGHHHHHHHHHHHTCCC-TTSCHHHHHHHHHHHHHHHHTTGGGCCHHHHHHHHTSGGGTTSCCSC---
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHH---
T ss_conf 89873157775999999999999999775-01369999999999999999885011369999986087311101567---
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00254234689999999999999-99630037998654677654666412355431048887899876766532124799
Q 005483 503 RIYGEDAGMWIKAVDDGLHELFH-EYLVQMLALPDTFMDEGLEVIPKSEASREETLHAGNIEEGTPQEHSQDLSLISIGD 581 (694)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (694)
......+. ......+.. ...................... . .. .......
T Consensus 285 ---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~----~~-------~~~~~~~ 334 (447)
T d2bw3a2 285 ---VAQIKEFC---LSKMEDLELINRMSSFNELSATQLNQSDSNSH-------------N----SI-------DLTSHSK 334 (447)
T ss_dssp ---HHHHHHHH---HHHHHHHHHHHHHHHTTCSCSSSCCC----------------------------------------
T ss_pred ---HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------------C----CC-------CCCCHHH
T ss_conf ---87899999---99999999998888888776654056644444-------------4----44-------5441332
Q ss_pred CCCHHH----HHH--HCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 972243----321--00147998333999998414989988766789997602773028999997716566552212111
Q 005483 582 GLSDFE----VYI--SEDTSGQPMRSELDQYLEEFLLPRTQDFDILDWWRLNQAKYPTLSRMASDILSIPFSTVPTDSVF 655 (694)
Q Consensus 582 ~~~~~~----~~~--~~~~~~~~~~~El~~y~~~~~~~~~~~~dpl~~W~~~~~~fP~L~~lA~~~LsiPass~~~Er~F 655 (694)
...... ... ...........|++.|+.++.. ...+.+|++||+.++..||.|+++|+++|++|+||+.|||+|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~el~~yl~~~~~-~~~~~~~l~~W~~~~~~yP~L~~lA~~~Lsip~tsa~~ER~F 413 (447)
T d2bw3a2 335 DISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVI-LSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTF 413 (447)
T ss_dssp CCCHHHHHCHHHHHHHHHSCCCCHHHHHHHHHTCCCC-CCTTCCHHHHHHHTTTTSHHHHHHHHHHHTSCSCTTTTHHHH
T ss_pred HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC-CCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 1110241147765401011111548899998637454-678888899998787124899999999948887044999887
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 348863124324789878999977421012799
Q 005483 656 DTVSKKIDSYRSSLRPVTLEALICAKDWLQYGS 688 (694)
Q Consensus 656 S~~~~~~~~~R~~L~~~~le~l~~l~~~~~~~~ 688 (694)
|.++.+++++|++|+++++++|+||++|+|+.+
T Consensus 414 S~~~~i~t~~R~~L~~e~le~L~~l~~~~k~~~ 446 (447)
T d2bw3a2 414 SLAGNIITEKRNRIGQQTVDSLLFLNSFYKNFC 446 (447)
T ss_dssp HHTHHHHHCTTTCCCHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 324030576368999899999999999765602
No 2
>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=4.2e-08 Score=68.35 Aligned_cols=51 Identities=31% Similarity=0.574 Sum_probs=43.6
Q ss_pred CCCCCCCEEEEECCCC----CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 2222246255416982----1486366644444345865567247797674298986433
Q 005483 40 SIVWDYFTVETVDAGC----TRACCNQCKKSFAYITGSKLAGTSHLKRHITMGICPVSRQ 95 (694)
Q Consensus 40 S~vW~~F~~~~~~~~~----~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~~~~~~ 95 (694)
|+||+||++..+++|. .+++|++|.+++.+++ +|+||.-||+++|..++.+
T Consensus 1 S~vW~YFGF~~~~~g~i~~~~~i~C~lC~k~i~~~G-----NTtNl~~HL~~rHp~ef~~ 55 (60)
T d2ct5a1 1 SKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSG-----NTSNLSYHLEKNHPEEFCE 55 (60)
T ss_dssp CCTTSSSCCCCCSSSCGGGSSCCEETTTTEECCCCS-----STHHHHHHHHHSCHHHHHH
T ss_pred CCHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCC-----CCCHHHHHHHHCCHHHHHH
T ss_conf 933241374589997660136437999898846268-----8411999988509799998
No 3
>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=96.89 E-value=0.00068 Score=39.99 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-------CCCC----CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5445768999999999616999877898999999972-------9996----01670203868999999999999
Q 005483 129 SFNQDRSTQDIAKMIIVHEYPPHIVEHPAFIDFVHTL-------QPQF----NVASFNTIQGDCVAIYLREKQRL 192 (694)
Q Consensus 129 ~~~~~~~~~~l~~~i~~~~~P~~~ve~~~F~~l~~~l-------~p~~----~~ps~~~~~~~i~~~~~~~~~~i 192 (694)
..+++++.++++.|++.+..||++|++.||++|++.+ .... -+|++.+++..+...|++.+.-|
T Consensus 10 ~~~K~k~~~a~~qW~V~nCRp~siv~dsGlkklv~~fl~iGA~yG~nv~vddLlP~p~tis~~i~~~yeekr~~i 84 (84)
T d2bw3a1 10 ADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALI 84 (84)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGGGCHHHHHHHHHHHHHHHHHCSCBCHHHHSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 876899999999999964855300035229999999999837743357886709995357787889999876439
No 4
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.95 E-value=1.7 Score=16.99 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=23.0
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 8214863666444443458655672477976742989
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
|.+-..|..|++.+. ..++|.+|++..|.
T Consensus 5 gekPy~C~~C~k~F~--------~~~~L~~H~r~H~~ 33 (36)
T d1x6ha2 5 GEKPYACSHCDKTFR--------QKQLLDMHFKRYHD 33 (36)
T ss_dssp CCCCEECSSSSCEES--------SHHHHHHHHHHTTC
T ss_pred CCCCEECCCCCCCCC--------CHHHHHHHCCCCCC
T ss_conf 987978899878758--------77688886720479
No 5
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.81 E-value=1.2 Score=18.14 Aligned_cols=30 Identities=23% Similarity=0.370 Sum_probs=23.4
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 82148636664444434586556724779767429898
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGICP 91 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~~ 91 (694)
|.+-.+|..|++.++ -.++|.+|+...|..
T Consensus 5 gekP~~C~~C~k~F~--------~~~~L~~H~~~~H~~ 34 (36)
T d2ct1a2 5 GEKPYECYICHARFT--------QSGTMKMHILQKHTE 34 (36)
T ss_dssp CCCSEECTTTCCEES--------CHHHHHHHHHHHSSS
T ss_pred CCCCEECCCCCCCCC--------CHHHHHHHCCCCCCC
T ss_conf 987976897764114--------208999776055488
No 6
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.78 E-value=2.3 Score=16.21 Aligned_cols=29 Identities=21% Similarity=0.478 Sum_probs=22.8
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 98214863666444443458655672477976742989
Q 005483 53 AGCTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 53 ~~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
.|.+-.+|..|++.|. ..++|.+|+.. |-
T Consensus 3 TGekPy~C~~C~k~F~--------~~~~L~~H~r~-Ht 31 (35)
T d1srka_ 3 SGKRPFVCRICLSAFT--------TKANCARHLKV-HT 31 (35)
T ss_dssp SCCSCEECSSSCCEES--------SHHHHHHHHGG-GT
T ss_pred CCCCCCCCCCCCCCCC--------CHHHHHHHCCC-CC
T ss_conf 8874602887889656--------86999987110-47
No 7
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.31 E-value=3.2 Score=15.25 Aligned_cols=29 Identities=28% Similarity=0.477 Sum_probs=22.5
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 1486366644444345865567247797674298986
Q 005483 56 TRACCNQCKKSFAYITGSKLAGTSHLKRHITMGICPV 92 (694)
Q Consensus 56 ~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~~~ 92 (694)
+-.+|..|++.++ -.++|.+|++..|-.+
T Consensus 4 Kpy~C~~Cgk~F~--------~~~~L~~H~r~~Ht~e 32 (39)
T d2epsa1 4 KPYICQSCGKGFS--------RPDHLNGHIKQVHTSE 32 (39)
T ss_dssp CCEECSSSCCEES--------SHHHHHHHHHHTSCCC
T ss_pred CCCCCCCCCCCCC--------CHHHHHCCCCCCCCCC
T ss_conf 8801998888838--------7678613281760899
No 8
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=50.94 E-value=4.1 Score=14.51 Aligned_cols=22 Identities=41% Similarity=0.821 Sum_probs=19.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 863666444443458655672477976742
Q 005483 58 ACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 58 ~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
..|..|++.++ -.++|.+|...
T Consensus 3 ~~C~~C~k~F~--------~~~~L~~H~r~ 24 (29)
T d2adra1 3 FVCEVCTRAFA--------RQEHLKRHYRS 24 (29)
T ss_dssp BCCTTTCCCBS--------CHHHHHHHHHT
T ss_pred CCCCCCCCCCC--------CCHHCCCCCCC
T ss_conf 79989989988--------70470430075
No 9
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.65 E-value=4.2 Score=14.44 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=19.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 863666444443458655672477976742989
Q 005483 58 ACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 58 ~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
..|++|+-.+. -.+||.+|++++..
T Consensus 2 y~C~~CnF~FK--------TKGNLTKHmkSKaH 26 (29)
T d1bboa2 2 YHCTYCNFSFK--------TKGNLTKHMKSKAH 26 (29)
T ss_dssp EECSSSSCEES--------SHHHHHHHHHSSSS
T ss_pred CCCCEEEEEEE--------ECCCHHHHHHHHHH
T ss_conf 55556126675--------26636676552421
No 10
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=45.56 E-value=5 Score=13.92 Aligned_cols=46 Identities=22% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCCCCCCCEEEEECCC-------------------------C-----CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 2222224625541698-------------------------2-----148636664444434586556724779767429
Q 005483 39 KSIVWDYFTVETVDAG-------------------------C-----TRACCNQCKKSFAYITGSKLAGTSHLKRHITMG 88 (694)
Q Consensus 39 ~S~vW~~F~~~~~~~~-------------------------~-----~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~ 88 (694)
...||.-|.....+++ + +..+|..|++-+. --|+.+|++.
T Consensus 98 DHIVW~GFkvVe~dG~L~QED~YEYLGgrlieHiK~~m~~GqDyvFWQFYKCe~CgKYvD---------ie~~~~H~k~- 167 (218)
T d2czra1 98 DHIVWSGFKVVEDNGKLVQEDVYEYLGAALVNHIKNNALAGQDYIFWQFYKCEECGKYVD---------IENLEAHLRE- 167 (218)
T ss_dssp HTEEEEEEEEEEETTEEEEEEEEEECHHHHHHHHHTTCCBTTTEEEEEEEECTTTCCEEE---------GGGHHHHHHT-
T ss_pred HHEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCCCEEC---------HHHHHHHHHH-
T ss_conf 235630318981489540677999976999999870653576258988865254076413---------8999999987-
Q ss_pred CCCCCC
Q ss_conf 898643
Q 005483 89 ICPVSR 94 (694)
Q Consensus 89 h~~~~~ 94 (694)
|....+
T Consensus 168 HG~~~~ 173 (218)
T d2czra1 168 HGIKLH 173 (218)
T ss_dssp TTCCGG
T ss_pred CCCCHH
T ss_conf 085254
No 11
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.70 E-value=5.5 Score=13.63 Aligned_cols=26 Identities=31% Similarity=0.602 Sum_probs=21.1
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 8214863666444443458655672477976742
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
|.+-.+|..|++.+. -.++|.+|.+.
T Consensus 8 geKPy~C~~C~k~F~--------~~~~L~~H~r~ 33 (37)
T d1p7aa_ 8 GIKPFQCPDCDRSFS--------RSDHLALHRKR 33 (37)
T ss_dssp CSSSBCCTTTCCCBS--------SHHHHHHHHGG
T ss_pred CCCCEEECCCCCEEC--------CHHHHHHHHHC
T ss_conf 966857599998924--------88999988760
No 12
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.57 E-value=5.5 Score=13.62 Aligned_cols=26 Identities=35% Similarity=0.617 Sum_probs=21.2
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 8214863666444443458655672477976742
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
+..-..|..|++.|. ..++|.+|...
T Consensus 9 ~ekpy~C~~CgK~F~--------~~s~L~~H~r~ 34 (38)
T d2cota2 9 ERRRYKCDECGKSFS--------HSSDLSKHRRT 34 (38)
T ss_dssp CSCSSBCSSSCCBCS--------CHHHHHHHHTT
T ss_pred CCCCEECCCCCCEEE--------CHHHHHHHCCC
T ss_conf 998972588786050--------77897875853
No 13
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.28 E-value=5.6 Score=13.59 Aligned_cols=26 Identities=31% Similarity=0.542 Sum_probs=21.3
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 8214863666444443458655672477976742
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
|.+-..|..|++.|. -.++|.+|.+.
T Consensus 4 gekpy~C~~Cgk~F~--------~~~~L~~H~r~ 29 (33)
T d1x6ea1 4 GEKPYGCVECGKAFS--------RSSILVQHQRV 29 (33)
T ss_dssp TCCCEECSSSCCEES--------SHHHHHHHHHG
T ss_pred CCCCEECCCCCCEEC--------CHHHHHHHCCC
T ss_conf 998863899988728--------66786766650
No 14
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.50 E-value=5.6 Score=13.56 Aligned_cols=23 Identities=35% Similarity=0.821 Sum_probs=19.2
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 4863666444443458655672477976742
Q 005483 57 RACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 57 ~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
...|..|++.+. -.++|.+|...
T Consensus 2 py~C~~C~k~F~--------~~s~L~~H~r~ 24 (29)
T d1sp1a_ 2 KFACPECPKRFM--------RSDHLSKHIKT 24 (29)
T ss_dssp CSCCTTTTCCCS--------CSHHHHHHHHG
T ss_pred CEECCCCCCEEC--------CHHHHHHHCCC
T ss_conf 998990888604--------35783134376
No 15
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=40.90 E-value=5.8 Score=13.45 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=24.2
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 821486366644444345865567247797674298986
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGICPV 92 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~~~ 92 (694)
|....+|+.|.+++. .-||+-||.-+-|...
T Consensus 5 g~~~yRC~~C~r~YT--------HISNFCRHyvtSHk~n 35 (37)
T d2drpa1 5 GEHTYRCKVCSRVYT--------HISNFCRHYVTSHKRN 35 (37)
T ss_dssp ETTEEECTTTCCEES--------SHHHHHHHHHHHSSSS
T ss_pred CCCEEEEEHHHHHHH--------HHHHHHHHHHHHCCCC
T ss_conf 671787512367899--------8999999998603668
No 16
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.78 E-value=5.9 Score=13.44 Aligned_cols=23 Identities=30% Similarity=0.658 Sum_probs=19.1
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 4863666444443458655672477976742
Q 005483 57 RACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 57 ~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
-.+|..|++.|+. .++|.+|+..
T Consensus 3 Py~C~~C~k~F~~--------~~~L~~H~r~ 25 (28)
T d1a1ia2 3 PFQCRICMRNFSR--------SDHLTTHIRT 25 (28)
T ss_dssp CEECTTTCCEESC--------HHHHHHHHHH
T ss_pred CCCCCCCCCEECC--------CCCCCCCCCC
T ss_conf 8009978697446--------2005141988
No 17
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}
Probab=38.28 E-value=5.7 Score=13.55 Aligned_cols=28 Identities=21% Similarity=0.424 Sum_probs=22.3
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 214863666444443458655672477976742989
Q 005483 55 CTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 55 ~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
..-+.|-+|+.++. ..-||+|||+-.|-
T Consensus 22 ~qpatcpic~avir--------qsrnlrrhlel~hf 49 (54)
T d1yuja_ 22 EQPATCPICYAVIR--------QSRNLRRHLELRHF 49 (54)
T ss_dssp SCCEECTTTCCEES--------SHHHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHH--------HHHHHHHHHHHHHH
T ss_conf 59977704899999--------87879988898841
No 18
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.37 E-value=8.5 Score=12.34 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=20.1
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 86366644444345865567247797674298986
Q 005483 58 ACCNQCKKSFAYITGSKLAGTSHLKRHITMGICPV 92 (694)
Q Consensus 58 ~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~~~ 92 (694)
..|.+|.-.- ...+||+-|++++|...
T Consensus 3 y~cqyc~yrs--------adssnlkthiktkhske 29 (30)
T d1klra_ 3 YQCQYCEFRS--------ADSSNLKTHIKTKHSKE 29 (30)
T ss_dssp CCCSSSSCCC--------SCSHHHHHHHHHHTSSC
T ss_pred CCCCCCCCCC--------CCCHHHHHHHHCCCCCC
T ss_conf 2044130013--------66223455522123457
No 19
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.27 E-value=9.6 Score=11.99 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=21.1
Q ss_pred CCCEEECCC--CCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 821486366--6444443458655672477976742
Q 005483 54 GCTRACCNQ--CKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 54 ~~~~~~C~~--C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
|.....|.+ |++.|+. .++|.+|...
T Consensus 15 gekpy~C~~~~C~k~F~~--------~~~L~~H~r~ 42 (47)
T d1ncsa_ 15 PDKTFECLFPGCTKTFKR--------RYNIRSHIQT 42 (47)
T ss_dssp TTTEEECCCTTCCCEECS--------SSSHHHHHHH
T ss_pred CCCCEECCCCCCCCCCCC--------CHHHHHHCCC
T ss_conf 888857786789960458--------4577705526
No 20
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.43 E-value=10 Score=11.77 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=18.5
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 863666444443458655672477976742989
Q 005483 58 ACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 58 ~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
..|+..+..-+|. ..|.|++|+++.|.
T Consensus 3 Y~Ck~~gC~K~Yt------dPSSLRKH~k~~HG 29 (29)
T d2glia5 3 YVCKLPGCTKRYT------DPSSLRKHVKTVHG 29 (29)
T ss_dssp EECCSTTTCCEES------SHHHHHHHHHHSCC
T ss_pred EECCCCCCCCCCC------CHHHHHHHHHHHCC
T ss_conf 0243699886657------88999998785179
No 21
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.86 E-value=11 Score=11.70 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=18.2
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 863666444443458655672477976742
Q 005483 58 ACCNQCKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 58 ~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
..|..|++.|+ ..++|.+|.+.
T Consensus 3 y~C~eCgK~F~--------~~s~L~~Hqri 24 (26)
T d1x6ea2 3 YKCLECGKAFS--------QNSGLINHQRI 24 (26)
T ss_dssp EECSSSCCEES--------SHHHHHHHHHH
T ss_pred CCCCCCCCEEC--------CCCCCCCCCCC
T ss_conf 24889858236--------67363668567
No 22
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.21 E-value=11 Score=11.58 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=22.3
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 8214863666444443458655672477976742989
Q 005483 54 GCTRACCNQCKKSFAYITGSKLAGTSHLKRHITMGIC 90 (694)
Q Consensus 54 ~~~~~~C~~C~~~~~~~~~~~~~~ts~l~~Hl~~~h~ 90 (694)
|.....|..|++.|. +-..|..|.+++.+
T Consensus 12 G~gqfYCv~C~K~F~--------se~~l~~H~ksKkH 40 (67)
T d1zr9a1 12 GGGLHRCLACARYFI--------DSTNLKTHFRSKDH 40 (67)
T ss_dssp GGGCSEETTTTEECS--------SHHHHHHHTTCHHH
T ss_pred CCCEEECCCCCCCCC--------CHHHHHHHHCCCHH
T ss_conf 998786130218369--------89999999710089
No 23
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.67 E-value=12 Score=11.30 Aligned_cols=22 Identities=32% Similarity=0.681 Sum_probs=18.5
Q ss_pred EECCC--CCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 86366--6444443458655672477976742
Q 005483 58 ACCNQ--CKKSFAYITGSKLAGTSHLKRHITM 87 (694)
Q Consensus 58 ~~C~~--C~~~~~~~~~~~~~~ts~l~~Hl~~ 87 (694)
.+|.. |++.|+ -.++|.+|+..
T Consensus 3 ~~C~~~gCgk~F~--------~~~~L~~H~r~ 26 (30)
T d2glia3 3 HKCTFEGCRKSYS--------RLENLKTHLRS 26 (30)
T ss_dssp CCCCSTTCCCCCS--------SHHHHHHHHHH
T ss_pred EECCCCCCCCEEC--------CHHHHHHHCCC
T ss_conf 0688899884489--------76575553382
Done!