Your job contains 1 sequence.
>005484
MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG
RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID
RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK
HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF
YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVEFRESVLGVM
PHHWDRREDTLLKLSHFRRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGK
AATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLHLQEG
GLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNASICHH
SPFNLFPHGEFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRGEVTAY
SPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQ
EAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQPGALFF
STLVGCLIVVMGVIFVTQHLNSVKAKPRASSGLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005484
(694 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080988 - symbol:AT3G51050 "AT3G51050" species... 3020 7.0e-315 1
DICTYBASE|DDB_G0275747 - symbol:DDB_G0275747 "FG-GAP repe... 449 2.0e-59 3
>TAIR|locus:2080988 [details] [associations]
symbol:AT3G51050 "AT3G51050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0007160 "cell-matrix adhesion"
evidence=ISS] [GO:0008305 "integrin complex" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] GO:GO:0005783
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 IPI:IPI00549001
RefSeq:NP_190674.2 UniGene:At.852 PRIDE:F4J381
EnsemblPlants:AT3G51050.1 GeneID:824269 KEGG:ath:AT3G51050
OMA:WDRREDT Uniprot:F4J381
Length = 698
Score = 3020 (1068.2 bits), Expect = 7.0e-315, P = 7.0e-315
Identities = 555/696 (79%), Positives = 630/696 (90%)
Query: 1 MRKRDLAILMLSAFAIFFSLQHEGDFSFREAWFHLSEEYPIKFDADRLPPPIVADLNGDG 60
MRKRDLAILMLS FAIFF+LQHEGDF+F+EAWFHL +EYP+K++ADRLPPPIVADLNGDG
Sbjct: 1 MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDG 60
Query: 61 RKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVID 120
+KEVLVAT+DAKIQVLEPH+RRVDEGFSEARVLAE++LLPDKIR+ASGRRAVAMATGVID
Sbjct: 61 KKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEITLLPDKIRVASGRRAVAMATGVID 120
Query: 121 RTYRQGQPLKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREIAISISNYTLK 180
R Y+ G P KQV+VVVTSGWSV+CFDHNL KLWE NLQEDFP NAHHREIAISISNYTLK
Sbjct: 121 RYYKNGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLK 180
Query: 181 HGDTGLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAF 240
HGDTGLVIVGGRMEMQP+ MDPFEE+G+ +NA+QHRRSA+E +ASE+SG ++LRHF+
Sbjct: 181 HGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNADQHRRSATENQASEDSGAINLRHFSV 240
Query: 241 YAFAGRSGLLRWSRKNENIEAQPTDASQLIPQHNYKLDVHALNSRHPGEVE---FRESVL 297
YAFAG++GLLRWS+K +++EA +DASQLIPQHNYKLDVHALNSRHPGE E FRES+L
Sbjct: 241 YAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESIL 300
Query: 298 GVMPHHWDRREDTLLKLSHFRRHKRKILKKVVG-KSTSYPFHKPEEHHPPGKDSTKKISN 356
VMPH WDRREDTLLKL+HFRRHKRK LKK G KST+YPFHKPEEH P GKD ++KI
Sbjct: 301 SVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPK 360
Query: 357 LIGKAATYAGSAKSKKPVNYIPTITNYTQLWWVPNVVVAHQKEGIEAVHLASGRTVCKLH 416
LIGKAA YAGSAK KK + YIPTITNYT+LWWVPNVVVAHQKEGIEA+HL +GRT+CKL
Sbjct: 361 LIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLS 420
Query: 417 LQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMEVLRPCWAVATSGVPVREQLFNAS 476
L EGGLHADINGDGVLDHVQ VGGN E+TVVSGSMEVL+PCWAVATSGVP+REQLFN S
Sbjct: 421 LLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVS 480
Query: 477 ICHHSPFNLFPHG-EFSRNFGRTSDVASLEVATPILIPRSDGHRHRKGSHGDVVFLTNRG 535
ICHHSPFN +G ++SR+F + D ++LE+ATPILIPR DGH+HRKGSHGDV+FLTNRG
Sbjct: 481 ICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRKGSHGDVIFLTNRG 540
Query: 536 EVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL 595
EVT+Y+P +HGHDA+WQWQL T+ATWSNLPSPSG+TE+ TVVPTLK FSLR+HDNQ MIL
Sbjct: 541 EVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMIL 600
Query: 596 AGGDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNGVYGFVQTRQP 655
AGGDQ AV+ISPGGSIL SI+LP+ PTHAL+ +DFSNDGLTDVI+MTSNGVYGFVQTRQP
Sbjct: 601 AGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQP 660
Query: 656 GALFFSTLVGCLIVVMGVIFVTQHLNSVKAKPRASS 691
GALFFS+LVGCL+VVM VIFVTQHLNS++ KPR SS
Sbjct: 661 GALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSS 696
>DICTYBASE|DDB_G0275747 [details] [associations]
symbol:DDB_G0275747 "FG-GAP repeat-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0031153 "slug
development involved in sorocarp development" evidence=IMP]
dictyBase:DDB_G0275747 EMBL:AAFI02000013 GO:GO:0031153
RefSeq:XP_643541.1 EnsemblProtists:DDB0202478 GeneID:8620123
KEGG:ddi:DDB_G0275747 eggNOG:NOG70747 InParanoid:Q553M8 OMA:INDFLIT
Uniprot:Q553M8
Length = 799
Score = 449 (163.1 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 132/433 (30%), Positives = 212/433 (48%)
Query: 89 EARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFDHN 148
E VL E SLL D + +A+GRR +A+ TG + G+ +Q++VVVT GW+V+CFD+
Sbjct: 116 ELPVLYESSLLSD-VGLATGRRPIAIKTGYAKHSI-PGERRQQIIVVVTDGWAVLCFDNK 173
Query: 149 LNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPHTIMDPFEEIG 208
L KLWE+ ++ P + EI+I+I T+ D G+VI+GGRME P I P I
Sbjct: 174 LKKLWESYASDEVLPGHYQSEISITILPTTIPD-DKGIVIIGGRMEPLPGVIHKPHYSIP 232
Query: 209 LAEKNAEQHRRSASEKEASENSGTV--DLRHFAFYAFAGRSGLLRWSRKNENIEAQ-P-- 263
+ + E + +++ +S T + HF+++++ + G RWS + + + + P
Sbjct: 233 MFGEKVETDKDHDHKRDDDHDSFTAHREENHFSYFSYDCKDGYKRWSHEENDFKPENPHT 292
Query: 264 TDASQL---IPQHNYKLDVHALNSRHPGEVE---FRESVLGVMPHHWDRREDTLLKLSHF 317
T+ + I H++K + + H GEV+ +R+S+L +PH W DT L+ HF
Sbjct: 293 TEEHKKDSDISLHSFKQHIFS-QLEHLGEVDWKTYRDSILASLPHKWSSNFDTKLEPRHF 351
Query: 318 RRHKRKILKKVVGKSTSYPFHKPEEHHPPGKDSTKKISNLIGKAATYAGSAKSKKPVNY- 376
++KI + +T+ D T I+ LIG + T N+
Sbjct: 352 ---EKKI--NTIRGTTN-------------NDGTNVINGLIGSSNTLNNEMIEFYSKNFD 393
Query: 377 -IPTITNYTQLWWV------PNVVVAHQKEGIEAVHLASGRTVCKLHLQEGGLHAD---- 425
++ Q+ + PNV+V H K GIE +H+ SG+T+CKL L + D
Sbjct: 394 TFSILSKKDQISFKSQHIENPNVIVTHHKYGIEVIHIVSGKTLCKLVLDGTDFYTDSNRY 453
Query: 426 -----INGDGVLDHVQAVGGNGAEQTV--------VSGSMEVLRPCWAVATSGVPVREQL 472
+NGDGVLD V++ GN + + C +A SG+P +E L
Sbjct: 454 IVYLDLNGDGVLDQVRSYAGNFKNSQLGRNKKNKNIGDDNNEDSYCVGLALSGLPPKETL 513
Query: 473 FNASICHHSPFNL 485
F+ IC FN+
Sbjct: 514 FDLKICGGQIFNM 526
Score = 141 (54.7 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 529 VFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVH 588
+F+ N G ++ + G IW+ T WS P P+L+ FS +
Sbjct: 627 LFMVNTGLISCFDTASFGGKKIWRVD--TGIHWSKHLEPR-------TFPSLQVFSFDIQ 677
Query: 589 DNQQMILAGGDQEAVVISPGGSILTSIDL-----PAPPTHALVCEDFSNDGLTDVILMTS 643
Q ILA G+Q V+++ G IL + P T V DF+NDG+ D ++ T
Sbjct: 678 STQPFILAIGEQSMVILNENGEILVDQQIWNAGESDPITAPPVVADFNNDGINDFLITTL 737
Query: 644 NGVYGFVQTRQPGALFFSTLVGCL-IVVMGVIFVTQHLNSVKAK 686
+G + FV + G +STL+ + +V++G++ + L+ K
Sbjct: 738 SGYHIFVTEK--GT--YSTLLPMIGLVLIGMLLLLLLLSGETGK 777
Score = 125 (49.1 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 1 MRKRDLAILMLSAFAIFFSLQHEGDFSFR-------EAWFHLSEEYPIKFDADRLPPPIV 53
MRKRD +L++S +F SL + D+ + + + YP K + + LP PI+
Sbjct: 1 MRKRDTWLLLVSILVVFISLYRQKDYKLNLLLEIPIDTNNYENSHYP-KIN-EFLPLPII 58
Query: 54 ADLNGDGRKEVLVATHDAKIQVLE 77
DLNGDG E++ T+D KI++L+
Sbjct: 59 TDLNGDGFNEIIYVTNDFKIRILD 82
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 129 LKQVLVVVTSGWSVMCFDHNLNKLWEANLQEDFPPNAHHREI 170
L +LVV S + D+ LN L E + + N+H+ +I
Sbjct: 10 LVSILVVFISLYRQK--DYKLNLLLEIPIDTNNYENSHYPKI 49
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 694 694 0.00081 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 624 (66 KB)
Total size of DFA: 380 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.58u 0.20s 58.78t Elapsed: 00:00:03
Total cpu time: 58.58u 0.20s 58.78t Elapsed: 00:00:03
Start: Tue May 21 01:47:43 2013 End: Tue May 21 01:47:46 2013