BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005487
(694 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/691 (58%), Positives = 539/691 (78%), Gaps = 1/691 (0%)
Query: 1 MNITRILTLLRTCTGS-KSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAML 59
M +++L+LLR CT S KSL+ K++HQ+++TLGL+ ++ LCKSLIN+YF+C+++ A
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 60 VFKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGL 119
VF+ D D+ +WN LM+ Y+KN M+ LE+F LL PDS+T+P+V+KA G L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 120 GSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVI 179
G +G+MIHT ++K+G++ DVV+ASS GMYAK N FE ++++FDEM ERDVASWNTVI
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 180 SCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFV 239
SC+YQ G+AEKALELF +M SGF+PNSV+LT IS+C+RL+ L+RGKEIH++ +K GF
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 240 SDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM 299
D Y++SALVDMYGKC CLE+AREVF++ KS+VAWN++I GY ++GDSKSCV++ RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 300 NEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRV 359
EG +P+ TT++S+LM+CSRS L HGK +HGY+IR+ + D+++N SLIDLYFKCG
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 360 SSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPAC 419
+ AE VF K K WNVMIS Y++VG++FKA+ +Y M VG KPD VTFTSVLPAC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 420 SQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWT 479
SQLAALEKGK+IH I ES+LET+E+++ ALLDMY+KCG EAF++FN +P++D+VSWT
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 480 SMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISE 539
MI+AYGSHG+ EAL F EMQ+ +PD +T LA+LSAC HAG +DEG +F+ M S+
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540
Query: 540 YNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGE 599
Y I+P EHYSC+ID+LGRAGRL EAY I+Q TPE ++A LLSTLFSAC LH + +G+
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD 600
Query: 600 KIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRI 659
+IA+LL+E PDD+STY+VL N+YAS + WD R++RLKMKE+GLRK PGCSWIE+ D++
Sbjct: 601 RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660
Query: 660 QPFFAEDKFYPQADMVYECLAILAGHMEKDE 690
FFAED+ + +A+ VYECLA+L+GHME +
Sbjct: 661 CHFFAEDRSHLRAENVYECLALLSGHMESGQ 691
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/691 (37%), Positives = 417/691 (60%), Gaps = 8/691 (1%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+ ++L+ C SKSLK+GK + + G + L L +Y +C + A VF +
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
L WN LM K+ + ++ LF ++ + ++ DSYT+ V K+ L SV G
Sbjct: 157 IEKAL-FWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ +H ++K+GF + +S Y K + A K+FDEM+ERDV SWN++I+ Y +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCA--RLMDLDRGKEIHKEFIKDGFVSDSY 243
G AEK L +F +M SG + + T+ +V + CA RL+ L G+ +H +K F +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSREDR 332
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
+ L+DMY KCG L+ A+ VF + +SVV++ ++IAGY+ G + VKLF M EEG
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
I P + T+++VL C+R L GK +H +I N + D+F++++L+D+Y KCG + AE
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDM-KEVGAKPDAVTFTSVLPACSQL 422
VF +M D++ WN +I GY +AL++++ + +E PD T VLPAC+ L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 423 AALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMI 482
+A +KG+EIH +I+ + ++ V +L+DMYAKCGA+ A +F+++ +DLVSWT MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 483 AAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNI 542
A YG HG EA+ LF +M+Q+ D I+F++LL ACSH+G VDEG +FN+M E I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 543 QPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIA 602
+P EHY+C++D+L R G L +AY +++ P I DA + L CR+H D+++ EK+A
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMP-IPPDATIWGALLCGCRIHHDVKLAEKVA 691
Query: 603 KLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPF 662
+ + E +P+++ Y++++N+YA +KW++V+++R ++ + GLRKNPGCSWIEI R+ F
Sbjct: 692 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751
Query: 663 FAEDKFYPQADMVYECLAILAGHMEKDELLP 693
A D P+ + + L + M ++ P
Sbjct: 752 VAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 248/463 (53%), Gaps = 2/463 (0%)
Query: 105 DSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMF 164
D T SVL+ C S+ GK + + GF++D + S + MY C + A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 165 DEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLD 224
DE+ WN +++ + G ++ LFKKM SG + +S T + V S + L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 225 RGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYS 284
G+++H +K GF + + ++LV Y K ++ AR+VF++ + V++WN++I GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 285 SRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVF 344
S G ++ + +F +M GI+ L TI SV C+ S + G+ +H ++ +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 345 INSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVG 404
++L+D+Y KCG + SA+ VF +MS VV + MI+GY G +A+ ++ +M+E G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 405 AKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAF 464
PD T T+VL C++ L++GK +H I E+ L + V AL+DMYAKCG++ EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 465 KVFNELPERDLVSWTSMIAAYGSHGRALEALKLFG-EMQQSNARPDSITFLALLSACSHA 523
VF+E+ +D++SW ++I Y + A EAL LF +++ PD T +L AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 524 GWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAY 566
D+G ++ R+ S L+D+ + G L A+
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLAH 554
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 202/387 (52%), Gaps = 7/387 (1%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
+++ I+++ C S+ + G+ +H V C +L+++Y C + D A V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F+ + + +S + ++A Y + + A++LF+ ++ + PD YT +VL C
Sbjct: 354 FREMSDRSVVS-YTSMIAGYAREGLAGEAVKLFEE-MEEEGISPDVYTVTAVLNCCARYR 411
Query: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
+ GK +H + + D+ ++++ MYAKC S + A +F EM +D+ SWNT+I
Sbjct: 412 LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIG 471
Query: 181 CYYQDGQAEKALELFK-KMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFV 239
Y ++ A +AL LF + F P+ T+ V+ +CA L D+G+EIH +++G+
Sbjct: 472 GYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531
Query: 240 SDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM 299
SD +++++LVDMY KCG L +A +F+ K +V+W +IAGY G K + LF +M
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 300 NEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRN--KIQGDVFINSSLIDLYFKCG 357
+ GI+ + S+L +CS SG + G I+R+ KI+ V + ++D+ + G
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTG 650
Query: 358 RVSSAENVFEKMS-KTDVVYWNVMISG 383
+ A E M D W ++ G
Sbjct: 651 DLIKAYRFIENMPIPPDATIWGALLCG 677
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/703 (35%), Positives = 409/703 (58%), Gaps = 20/703 (2%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQ-NNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
LL+ + ++ GK IH V G +++ + +L+NLY C ++ VF I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 67 PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG---SVG 123
+S WN L++S + ALE F +L + ++P S+T SV+ AC L +
Sbjct: 162 RNQVS-WNSLISSLCSFEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 124 IGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYY 183
+GK +H + ++ G L +I + A MY K + + RD+ +WNTV+S
Sbjct: 220 MGKQVHAYGLRKGELNSFIINTLVA-MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 184 QDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD-S 242
Q+ Q +ALE ++M G +P+ T+++V+ +C+ L L GKE+H +K+G + + S
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEE 302
++ SALVDMY C + R VF+ + + WNA+IAGYS K + LF M E
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 303 -GIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
G+ TT++ V+ +C RSG + +HG++++ + D F+ ++L+D+Y + G++
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMK-----------EVGAKPDAV 410
A +F KM D+V WN MI+GYV + AL + M+ V KP+++
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 411 TFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNEL 470
T ++LP+C+ L+AL KGKEIH + I++ L T+ V AL+DMYAKCG + + KVF+++
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 471 PERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGG 530
P++++++W +I AYG HG EA+ L M +P+ +TF+++ +ACSH+G VDEG
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 531 YYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACR 590
F +M +Y ++P ++HY+C++DLLGRAGR++EAY ++ P AG S+L A R
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 591 LHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGC 650
+H ++E+GE A+ LI+ +P+ +S Y++L+N+Y+S WD+ ++R MKE G+RK PGC
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 651 SWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKDELLP 693
SWIE GD + F A D +PQ++ + L L M K+ +P
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/520 (30%), Positives = 272/520 (52%), Gaps = 22/520 (4%)
Query: 73 WNGLMASYTK-NYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTH 131
W L+ S + N + L DM++ +KPD+Y +P++LKA L + +GK IH H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 132 LIKTGFLLD-VVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEK 190
+ K G+ +D V +A++ +Y KC F K+FD +SER+ SWN++IS + E
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 191 ALELFKKMRGSGFQPNSVTLTTVISSCARLM---DLDRGKEIHKEFIKDGFVSDSYISSA 247
ALE F+ M +P+S TL +V+++C+ L L GK++H ++ G + +S+I +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINT 241
Query: 248 LVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPT 307
LV MYGK G L ++ + + +V WN +++ ++ M EG++P
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 308 LTTISSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSAENVF 366
TISSVL +CS L+ GK +H Y ++N + + F+ S+L+D+Y C +V S VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKE-VGAKPDAVTFTSVLPACSQLAAL 425
+ M + WN MI+GY +AL ++ M+E G ++ T V+PAC + A
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAY 485
+ + IH +++ L+ + V L+DMY++ G +D A ++F ++ +RDLV+W +MI Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 486 GSHGRALEALKLFGEMQ-----------QSNARPDSITFLALLSACSHAGWVDEGGYYFN 534
+AL L +MQ + + +P+SIT + +L +C+ + +G
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 535 LMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPE 574
I N+ S L+D+ + G LQ + + P+
Sbjct: 542 YAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 136/267 (50%), Gaps = 11/267 (4%)
Query: 359 VSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPA 418
VS A ++F S++ +W ++ V +A+ Y DM +G KPD F ++L A
Sbjct: 48 VSGAPSIFISQSRSPE-WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 419 CSQLAALEKGKEIHNHIIESKLETNEI-VMGALLDMYAKCGAVDEAFKVFNELPERDLVS 477
+ L +E GK+IH H+ + + + V L+++Y KCG +KVF+ + ER+ VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 478 WTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMI 537
W S+I++ S + AL+ F M N P S T +++++ACS+ + G +
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE--GLMMGKQV 224
Query: 538 SEYNIQPRNEHYSCLIDLL----GRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHR 593
Y ++ + E S +I+ L G+ G+L + +L S R+ + L S C+ +
Sbjct: 225 HAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQ 282
Query: 594 DIEMGEKIAKLLIEK-DPDDSSTYIVL 619
+E E + ++++E +PD+ + VL
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVL 309
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
N ++T+L +C +L +GK IH + L ++A+ +L+++Y C + VF
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
I ++ WN ++ +Y + A++L M++ +KP+ T+ SV AC G
Sbjct: 576 DQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGM 633
Query: 122 VGIGKMI 128
V G I
Sbjct: 634 VDEGLRI 640
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/685 (35%), Positives = 398/685 (58%), Gaps = 6/685 (0%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
LL C+ SLKE + I V GL L++L+ + D A VF+ ID+ L
Sbjct: 43 LLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
++ L++ ++ + K AL+ F + ++ ++P Y + +LK CG + +GK I
Sbjct: 100 NV-LYHTMLKGFAKVSDLDKALQFF-VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
H L+K+GF LD+ + MYAKC A K+FD M ERD+ SWNT+++ Y Q+G A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
ALE+ K M +P+ +T+ +V+ + + L + GKEIH ++ GF S IS+AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
VDMY KCG LE AR++F+ + ++VV+WN++I Y + K + +F +M +EG+KPT
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEK 368
++ L +C+ G L+ G+ +H + + +V + +SLI +Y KC V +A ++F K
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 369 MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKG 428
+ +V WN MI G+ G AL +S M+ KPD T+ SV+ A ++L+
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 429 KEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSH 488
K IH ++ S L+ N V AL+DMYAKCGA+ A +F+ + ER + +W +MI YG+H
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 489 GRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEH 548
G AL+LF EMQ+ +P+ +TFL+++SACSH+G V+ G F +M Y+I+ +H
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 549 YSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEK 608
Y ++DLLGRAGRL EA+ + P ++ + + AC++H+++ EK A+ L E
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMP-VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 609 DPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKF 668
+PDD +++L+N+Y + W++V ++R+ M GLRK PGCS +EI + + FF+
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 669 YPQADMVYECLAILAGHMEKDELLP 693
+P + +Y L L H+++ +P
Sbjct: 697 HPDSKKIYAFLEKLICHIKEAGYVP 721
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 142/272 (52%), Gaps = 7/272 (2%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
++ L C L+ G+ IH+ V LGL N+++ SLI++Y C+ D A +F +
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+ +S WN ++ + +N I AL F +++ +KPD++TY SV+ A L
Sbjct: 400 SRTLVS-WNAMILGFAQNGRPIDALNYFSQ-MRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
K IH ++++ +V + ++ MYAKC + A +FD MSER V +WN +I Y
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKE---IHKEFIKDGFVSDS 242
G + ALELF++M+ +PN VT +VIS+C+ ++ G + + KE D
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVV 274
Y A+VD+ G+ G L A + Q +K V
Sbjct: 578 Y--GAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/722 (36%), Positives = 402/722 (55%), Gaps = 57/722 (7%)
Query: 17 KSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSL--WN 74
K++ + K+IHQK+++ G+ + L LI+ Y S +A+ + + P D + WN
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFP-PSDAGVYHWN 96
Query: 75 GLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIK 134
L+ SY N L LF L+ + PD+YT+P V KACG + SV G+ H +
Sbjct: 97 SLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 135 TGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALEL 194
TGF+ +V + ++ MY++C S A K+FDEMS DV SWN++I Y + G+ + ALE+
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 195 FKKMRGS-GFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYG 253
F +M G +P+++TL V+ CA L GK++H + + + ++ + LVDMY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 254 KCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEE----------- 302
KCG ++ A VF +K VV+WNA++AGYS G + V+LF +M EE
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 303 ------------------------GIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNK 338
GIKP T+ SVL C+ G L HGK +H Y I+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 339 I------QGDV-FINSSLIDLYFKCGRVSSAENVFEKMS--KTDVVYWNVMISGYVTVGD 389
I GD + + LID+Y KC +V +A +F+ +S + DVV W VMI GY GD
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 390 YFKALAIYSDM--KEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEI-V 446
KAL + S+M ++ +P+A T + L AC+ LAAL GK+IH + + ++ + V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 447 MGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNA 506
L+DMYAKCG++ +A VF+ + ++ V+WTS++ YG HG EAL +F EM++
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 507 RPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAY 566
+ D +T L +L ACSH+G +D+G YFN M + + + P EHY+CL+DLLGRAGRL A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 567 GILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASV 626
+++ P + + S CR+H +E+GE A+ + E + +Y +LSN+YA+
Sbjct: 636 RLIEEMP-MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 627 KKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHM 686
+W +V +IR M+ G++K PGCSW+E FF DK +P A +Y+ +L HM
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ---VLLDHM 751
Query: 687 EK 688
++
Sbjct: 752 QR 753
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 406/702 (57%), Gaps = 13/702 (1%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
M+ +LL++C ++ + GK++H +++ ++ + L SLI+LY + A V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 61 FKTIDN--PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGG 118
F+T+ D+ W+ +MA Y N + A+++F L+ L P+ Y Y +V++AC
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIRACSN 178
Query: 119 LGSVGIGKMIHTHLIKTG-FLLDVVIASSTAGMYAKC-NSFECAVKMFDEMSERDVASWN 176
VG+G++ L+KTG F DV + S M+ K NSFE A K+FD+MSE +V +W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 177 TVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKD 236
+I+ Q G +A+ F M SGF+ + TL++V S+CA L +L GK++H I+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 237 GFVSDSYISSALVDMYGKC---GCLEMAREVFEQTVLKSVVAWNALIAGYSSRGD-SKSC 292
G V D + +LVDMY KC G ++ R+VF++ SV++W ALI GY + +
Sbjct: 299 GLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 293 VKLFWRMNEEG-IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLID 351
+ LF M +G ++P T SS +C + GK + G + + + + +S+I
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 352 LYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVT 411
++ K R+ A+ FE +S+ ++V +N + G ++ +A + S++ E A T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 412 FTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELP 471
F S+L + + ++ KG++IH+ +++ L N+ V AL+ MY+KCG++D A +VFN +
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 472 ERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGY 531
R+++SWTSMI + HG A+ L+ F +M + +P+ +T++A+LSACSH G V EG
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 532 YFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRL 591
+FN M ++ I+P+ EHY+C++DLL RAG L +A+ + + P + D + T ACR+
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP-FQADVLVWRTFLGACRV 655
Query: 592 HRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCS 651
H + E+G+ A+ ++E DP++ + YI LSN+YA KW+E ++R KMKE L K GCS
Sbjct: 656 HSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Query: 652 WIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKDELLP 693
WIE+GD+I F+ D +P A +Y+ L L +++ +P
Sbjct: 716 WIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 225/451 (49%), Gaps = 12/451 (2%)
Query: 89 ALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTA 148
A+ D++ ++ DS T+ S+LK+C +GK++H LI+ D V+ +S
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 149 GMYAKCNSFECAVKMFDEM---SERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQP 205
+Y+K A +F+ M +RDV SW+ +++CY +G+ A+++F + G P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 206 NSVTLTTVISSCARLMDLDRGKEIHKEFIKDG-FVSDSYISSALVDMYGKC-GCLEMARE 263
N T VI +C+ + G+ +K G F SD + +L+DM+ K E A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 264 VFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQ 323
VF++ +VV W +I G + ++ F M G + T+SSV +C+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 324 LKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKC---GRVSSAENVFEKMSKTDVVYWNVM 380
L GK +H + IR+ + DV SL+D+Y KC G V VF++M V+ W +
Sbjct: 285 LSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 381 ISGYVTVGDY-FKALAIYSDMKEVG-AKPDAVTFTSVLPACSQLAALEKGKEIHNHIIES 438
I+GY+ + +A+ ++S+M G +P+ TF+S AC L+ GK++ +
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 439 KLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLF 498
L +N V +++ M+ K +++A + F L E++LVS+ + + + +A KL
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 499 GEMQQSNARPDSITFLALLSACSHAGWVDEG 529
E+ + + TF +LLS ++ G + +G
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKG 493
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/690 (35%), Positives = 402/690 (58%), Gaps = 12/690 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
++++ C G + G +++++++ +G ++++ + +L+++Y A VF + P
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM--P 168
Query: 68 L-DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
+ DL WN L++ Y+ + Y ALE++ L +N ++ PDS+T SVL A G L V G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHEL-KNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H +K+G VV+ + MY K A ++FDEM RD S+NT+I Y +
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
E+++ +F + F+P+ +T+++V+ +C L DL K I+ +K GFV +S + +
Sbjct: 288 MVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLF---WRMNEEG 303
L+D+Y KCG + AR+VF K V+WN++I+GY GD +KLF M E+
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
T + SV +R LK GK +H I++ I D+ ++++LID+Y KCG V +
Sbjct: 407 DHITYLMLISV---STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLA 423
+F M D V WN +IS V GD+ L + + M++ PD TF LP C+ LA
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 424 ALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIA 483
A GKEIH ++ E+ + AL++MY+KCG ++ + +VF + RD+V+WT MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 484 AYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQ 543
AYG +G +AL+ F +M++S PDS+ F+A++ ACSH+G VDEG F M + Y I
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 544 PRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAK 603
P EHY+C++DLL R+ ++ +A +Q+ P I+ DA + +++ ACR D+E E++++
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMP-IKPDASIWASVLRACRTSGDMETAERVSR 702
Query: 604 LLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFF 663
+IE +PDD I+ SN YA+++KWD+V IR +K+ + KNPG SWIE+G + F
Sbjct: 703 RIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFS 762
Query: 664 AEDKFYPQADMVYECLAILAGHMEKDELLP 693
+ D PQ++ +Y+ L IL M K+ +P
Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIP 792
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 290/511 (56%), Gaps = 2/511 (0%)
Query: 11 RTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDL 70
R + S +L E + IH V++LGL ++ LI+ Y + ++ VF+ + ++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 71 SLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHT 130
LWN ++ +++KN ++ ALE + L ++ + PD YT+PSV+KAC GL +G +++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 131 HLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEK 190
++ GF D+ + ++ MY++ A ++FDEM RD+ SWN++IS Y G E+
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 191 ALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVD 250
ALE++ +++ S P+S T+++V+ + L+ + +G+ +H +K G S +++ LV
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 251 MYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTT 310
MY K AR VF++ ++ V++N +I GY + V++F N + KP L T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT 309
Query: 311 ISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS 370
+SSVL +C L K ++ Y+++ + + + LID+Y KCG + +A +VF M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 371 KTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKE 430
D V WN +ISGY+ GD +A+ ++ M + + D +T+ ++ ++LA L+ GK
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 431 IHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGR 490
+H++ I+S + + V AL+DMYAKCG V ++ K+F+ + D V+W ++I+A G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 491 ALEALKLFGEMQQSNARPDSITFLALLSACS 521
L++ +M++S PD TFL L C+
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 271/520 (52%), Gaps = 8/520 (1%)
Query: 110 PSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSE 169
P + +A ++ + IH +I G + Y+ ++ +F +S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 170 -RDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKE 228
++V WN++I + ++G +ALE + K+R S P+ T +VI +CA L D + G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 229 IHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGD 288
++++ + GF SD ++ +ALVDMY + G L AR+VF++ ++ +V+WN+LI+GYSS G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 289 SKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSS 348
+ ++++ + I P T+SSVL + +K G+ +HG+ +++ + V +N+
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 349 LIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPD 408
L+ +Y K R + A VF++M D V +N MI GY+ + +++ ++ + + KPD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306
Query: 409 AVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFN 468
+T +SVL AC L L K I+N+++++ V L+D+YAKCG + A VFN
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 469 ELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDE 528
+ +D VSW S+I+ Y G +EA+KLF M + D IT+L L+S + +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 529 G-GYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFS 587
G G + N + S I + LID+ + G + ++ I S D +T+ S
Sbjct: 427 GKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGT--GDTVTWNTVIS 482
Query: 588 ACRLHRDIEMGEKIAKLLIEKD-PDDSSTYIVLSNMYASV 626
AC D G ++ + + + D +T++V M AS+
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 388/693 (55%), Gaps = 4/693 (0%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
+++ L++ C K+ K + V +LG+ N + SLI Y D +F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
+ D +WN ++ Y K + ++ F ++ + + P++ T+ VL C
Sbjct: 197 DRVLQK-DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLL 254
Query: 122 VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISC 181
+ +G +H ++ +G + I +S MY+KC F+ A K+F MS D +WN +IS
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 182 YYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD 241
Y Q G E++L F +M SG P+++T ++++ S ++ +L+ K+IH ++ D
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 242 SYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNE 301
+++SAL+D Y KC + MA+ +F Q VV + A+I+GY G +++F + +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 302 EGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
I P T+ S+L LK G+ +HG+II+ I ++ID+Y KCGR++
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQ 421
A +FE++SK D+V WN MI+ + A+ I+ M G D V+ ++ L AC+
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 422 LAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSM 481
L + GK IH +I+ L ++ L+DMYAKCG + A VF + E+++VSW S+
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 482 IAAYGSHGRALEALKLFGEM-QQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEY 540
IAA G+HG+ ++L LF EM ++S RPD ITFL ++S+C H G VDEG +F M +Y
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 541 NIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEK 600
IQP+ EHY+C++DL GRAGRL EAY ++S P DAG+ TL ACRLH+++E+ E
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP-FPPDAGVWGTLLGACRLHKNVELAEV 733
Query: 601 IAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQ 660
+ L++ DP +S Y+++SN +A+ ++W+ V K+R MKE ++K PG SWIEI R
Sbjct: 734 ASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTH 793
Query: 661 PFFAEDKFYPQADMVYECLAILAGHMEKDELLP 693
F + D +P++ +Y L L G + + +P
Sbjct: 794 LFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/646 (28%), Positives = 326/646 (50%), Gaps = 10/646 (1%)
Query: 5 RILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTI 64
R+ LL+ C+ L++GK +H ++ + + + ++ +Y C ++ +F +
Sbjct: 37 RLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 65 D-NPLDLSLWNGLMASYTKNYMYITALEL-FDMLLQNPYLKPDSYTYPSVLKACGGLGSV 122
D + WN +++S+ +N + AL F ML + PD T+P ++KAC L +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG--VSPDVSTFPCLVKACVALKNF 154
Query: 123 GIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCY 182
+ + G + +ASS Y + + K+FD + ++D WN +++ Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 183 YQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDS 242
+ G + ++ F MR PN+VT V+S CA + +D G ++H + G +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEE 302
I ++L+ MY KCG + A ++F V WN +I+GY G + + F+ M
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 303 GIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSA 362
G+ P T SS+L S S+ L++ K +H YI+R+ I D+F+ S+LID YFKC VS A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 363 ENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQL 422
+N+F + + DVV + MISGY+ G Y +L ++ + +V P+ +T S+LP L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 423 AALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMI 482
AL+ G+E+H II+ + + A++DMYAKCG ++ A+++F L +RD+VSW SMI
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 483 AAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNI 542
A+ +F +M S D ++ A LSAC++ G MI ++++
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSL 573
Query: 543 QPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIA 602
S LID+ + G L+ A + ++ E ++ +++ +AC H ++ +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE--KNIVSWNSIIAACGNHGKLKDSLCLF 631
Query: 603 KLLIEKD--PDDSSTYIVLSNMYASVKKWDE-VRKIRLKMKELGLR 645
++EK D T++ + + V DE VR R ++ G++
Sbjct: 632 HEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/678 (35%), Positives = 389/678 (57%), Gaps = 7/678 (1%)
Query: 18 SLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLM 77
+L G ++H + + LGL +NI + SL+++Y C+ + A VF+ ++ D+ WN ++
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV-FWNAMI 400
Query: 78 ASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGF 137
Y N +ELF M +++ D +T+ S+L C + +G H+ +IK
Sbjct: 401 RGYAHNGESHKVMELF-MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 138 LLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKK 197
++ + ++ MYAKC + E A ++F+ M +RD +WNT+I Y QD +A +LFK+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 198 MRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGC 257
M G + L + + +C + L +GK++H +K G D + S+L+DMY KCG
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 258 LEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMS 317
++ AR+VF SVV+ NALIAGYS + + + V LF M G+ P+ T ++++ +
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 318 CSRSGQLKHGKVMHGYIIRNKIQGD-VFINSSLIDLYFKCGRVSSAENVFEKMSK-TDVV 375
C + L G HG I + + ++ SL+ +Y ++ A +F ++S +V
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 698
Query: 376 YWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHI 435
W M+SG+ G Y +AL Y +M+ G PD TF +VL CS L++L +G+ IH+ I
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 436 IESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPER-DLVSWTSMIAAYGSHGRALEA 494
+ +E+ L+DMYAKCG + + +VF+E+ R ++VSW S+I Y +G A +A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 495 LKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLID 554
LK+F M+QS+ PD ITFL +L+ACSHAG V +G F +MI +Y I+ R +H +C++D
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 555 LLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSS 614
LLGR G LQEA +++ ++ DA L S+L ACR+H D GE A+ LIE +P +SS
Sbjct: 879 LLGRWGYLQEADDFIEAQ-NLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSS 937
Query: 615 TYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADM 674
Y++LSN+YAS W++ +R M++ G++K PG SWI++ R F A DK + +
Sbjct: 938 AYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGK 997
Query: 675 VYECLAILAGHMEKDELL 692
+ L L M+ D ++
Sbjct: 998 IEMFLEDLYDLMKDDAVV 1015
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 279/544 (51%), Gaps = 11/544 (2%)
Query: 43 SLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYL 102
++IN Y A L+F + +P D+ WN +++ + K A+E F ++ +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSP-DVVAWNVMISGHGKRGCETVAIEYF-FNMRKSSV 323
Query: 103 KPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVK 162
K T SVL A G + ++ +G ++H IK G ++ + SS MY+KC E A K
Sbjct: 324 KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383
Query: 163 MFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMD 222
+F+ + E++ WN +I Y +G++ K +ELF M+ SG+ + T T+++S+CA D
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 223 LDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAG 282
L+ G + H IK + ++ +ALVDMY KCG LE AR++FE+ + V WN +I
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 283 YSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGD 342
Y + LF RMN GI ++S L +C+ L GK +H ++ + D
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 343 VFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKE 402
+ SSLID+Y KCG + A VF + + VV N +I+GY + + +A+ ++ +M
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLT 622
Query: 403 VGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMG-ALLDMYAKCGAVD 461
G P +TF +++ AC + +L G + H I + + +G +LL MY +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 462 EAFKVFNELPE-RDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSAC 520
EA +F+EL + +V WT M++ + +G EALK + EM+ PD TF+ +L C
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 521 SHAGWVDEGGYYFNLMIS-EYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDA 579
S + EG +L+ +++ + LID+ + G ++ G Q E+R +
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMK---GSSQVFDEMRRRS 797
Query: 580 GLLS 583
++S
Sbjct: 798 NVVS 801
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 273/557 (49%), Gaps = 39/557 (7%)
Query: 18 SLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLM 77
+L+ GK +H K + LG+ + L ++++LY C YA F ++ D++ WN ++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK--DVTAWNSML 132
Query: 78 ASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGF 137
+ Y+ L F L +N P+ +T+ VL C +V G+ IH +IK G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 138 LLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKK 197
+ + MYAKC+ A ++F+ + + + W + S Y + G E+A+ +F++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 198 MRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGC 257
MR G +P+ + TVI++ RL G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRL-----------------------------------GK 276
Query: 258 LEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMS 317
L+ AR +F + VVAWN +I+G+ RG ++ F+ M + +K T +T+ SVL +
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 318 CSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYW 377
L G V+H I+ + ++++ SSL+ +Y KC ++ +A VFE + + + V+W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 378 NVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIE 437
N MI GY G+ K + ++ DMK G D TFTS+L C+ LE G + H+ II+
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 438 SKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKL 497
KL N V AL+DMYAKCGA+++A ++F + +RD V+W ++I +Y EA L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 498 FGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLG 557
F M D + L AC+H + +G L + + + S LID+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KCGLDRDLHTGSSLIDMYS 575
Query: 558 RAGRLQEAYGILQSTPE 574
+ G +++A + S PE
Sbjct: 576 KCGIIKDARKVFSSLPE 592
Score = 262 bits (670), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 260/512 (50%), Gaps = 38/512 (7%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
+L TC +++ G+ IH ++ +GL+ N +L+++Y C A VF+ I +P
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP- 224
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
+ W L + Y K + A+ +F+ + + +PD + +V I
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAFVTV---------------I 268
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
+T+ I+ G L D + +F EMS DV +WN +IS + + G
Sbjct: 269 NTY-IRLGKLKDARL-------------------LFGEMSSPDVVAWNVMISGHGKRGCE 308
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
A+E F MR S + TL +V+S+ + +LD G +H E IK G S+ Y+ S+L
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSL 368
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
V MY KC +E A +VFE K+ V WNA+I GY+ G+S ++LF M G
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEK 368
T +S+L +C+ S L+ G H II+ K+ ++F+ ++L+D+Y KCG + A +FE+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 369 MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKG 428
M D V WN +I YV + +A ++ M G D S L AC+ + L +G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 429 KEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSH 488
K++H ++ L+ + +L+DMY+KCG + +A KVF+ LPE +VS ++IA Y S
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQ 607
Query: 489 GRALEALKLFGEMQQSNARPDSITFLALLSAC 520
EA+ LF EM P ITF ++ AC
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 194/389 (49%), Gaps = 8/389 (2%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+ + L+ CT L +GK +H V GL ++ SLI++Y C A VF ++
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+S+ N L+A Y++N + + +ML + + P T+ ++++AC S+ +G
Sbjct: 592 EWSVVSM-NALIAGYSQNNLEEAVVLFQEMLTRG--VNPSEITFATIVEACHKPESLTLG 648
Query: 126 KMIHTHLIKTGFLLD-VVIASSTAGMYAKCNSFECAVKMFDEMSE-RDVASWNTVISCYY 183
H + K GF + + S GMY A +F E+S + + W ++S +
Sbjct: 649 TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHS 708
Query: 184 QDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
Q+G E+AL+ +K+MR G P+ T TV+ C+ L L G+ IH D
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKS-VVAWNALIAGYSSRGDSKSCVKLFWRMNEE 302
S+ L+DMY KCG ++ + +VF++ +S VV+WN+LI GY+ G ++ +K+F M +
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 303 GIKPTLTTISSVLMSCSRSGQLKHG-KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
I P T VL +CS +G++ G K+ I + I+ V + ++DL + G +
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQE 888
Query: 362 AENVFEKMS-KTDVVYWNVMISGYVTVGD 389
A++ E + K D W+ ++ GD
Sbjct: 889 ADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+T+LR C+ SL+EG+ IH + L + +LI++Y C + + VF +
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
++ WN L+ Y KN AL++FD + Q+ ++ PD T+ VL AC G V G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS-HIMPDEITFLGVLTACSHAGKVSDG 853
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ I +I G+ A+ + C V + + W Y Q
Sbjct: 854 RKIFEMMI------------GQYGIEARVDHVACMVDL--------LGRWG-----YLQ- 887
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
+A+ +E +P++ ++++ +C D RG EI E + + +S
Sbjct: 888 -EADDFIE------AQNLKPDARLWSSLLGACRIHGDDIRG-EISAEKLIELEPQNSSAY 939
Query: 246 SALVDMYGKCGCLEMA---REVFEQTVLKSVVAWN 277
L ++Y GC E A R+V +K V ++
Sbjct: 940 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/670 (34%), Positives = 379/670 (56%), Gaps = 3/670 (0%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
++L C +SL+ G+ +H V+ LG ++ +C +L++LYF N A +F +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
D +N L+ ++ A+ELF + + L+PDS T S++ AC G++ G+
Sbjct: 353 -DAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
+H + K GF + I + +YAKC E A+ F E +V WN ++ Y
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSA 247
+ +F++M+ PN T +++ +C RL DL+ G++IH + IK F ++Y+ S
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 248 LVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPT 307
L+DMY K G L+ A ++ + K VV+W +IAGY+ + F +M + GI+
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 308 LTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFE 367
+++ + +C+ LK G+ +H + D+ ++L+ LY +CG++ + FE
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 368 KMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEK 427
+ D + WN ++SG+ G+ +AL ++ M G + TF S + A S+ A +++
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 428 GKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGS 487
GK++H I ++ ++ V AL+ MYAKCG++ +A K F E+ ++ VSW ++I AY
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 488 HGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNE 547
HG EAL F +M SN RP+ +T + +LSACSH G VD+G YF M SEY + P+ E
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 548 HYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIE 607
HY C++D+L RAG L A +Q P I+ DA + TL SAC +H+++E+GE A L+E
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMP-IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 608 KDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDK 667
+P+DS+TY++LSN+YA KKWD R KMKE G++K PG SWIE+ + I F+ D+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 668 FYPQADMVYE 677
+P AD ++E
Sbjct: 950 NHPLADEIHE 959
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 299/559 (53%), Gaps = 6/559 (1%)
Query: 9 LLRTCTG-SKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
+L C G S + + IH +++ GL+++ +C LI+LY D A VF +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RL 250
Query: 68 LDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
D S W +++ +KN A+ LF DM + + P Y + SVL AC + S+ IG+
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG--IMPTPYAFSSVLSACKKIESLEIGE 308
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H ++K GF D + ++ +Y + A +F MS+RD ++NT+I+ Q G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
EKA+ELFK+M G +P+S TL +++ +C+ L RG+++H K GF S++ I
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
AL+++Y KC +E A + F +T +++VV WN ++ Y D ++ ++F +M E I P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 307 TLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVF 366
T S+L +C R G L+ G+ +H II+ Q + ++ S LID+Y K G++ +A ++
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALE 426
+ + DVV W MI+GY KAL + M + G + D V T+ + AC+ L AL+
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 427 KGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYG 486
+G++IH S ++ AL+ +Y++CG ++E++ F + D ++W ++++ +
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 487 SHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRN 546
G EAL++F M + ++ TF + + A S + +G + +I++
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK-QVHAVITKTGYDSET 727
Query: 547 EHYSCLIDLLGRAGRLQEA 565
E + LI + + G + +A
Sbjct: 728 EVCNALISMYAKCGSISDA 746
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/568 (28%), Positives = 289/568 (50%), Gaps = 9/568 (1%)
Query: 9 LLRTCTGSK-SLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
LL C + SL EG+ +H +++ LGL +N L + L + Y + A VF +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 68 LDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKAC-GGLGSVGIG 125
+ WN ++ + LF M+ +N + P+ T+ VL+AC GG + +
Sbjct: 150 TIFT-WNKMIKELASRNLIGEVFGLFVRMVSEN--VTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ IH ++ G V+ + +Y++ + A ++FD + +D +SW +IS ++
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
+A+ LF M G P ++V+S+C ++ L+ G+++H +K GF SD+Y+
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
+ALV +Y G L A +F + V +N LI G S G + ++LF RM+ +G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P T++S++++CS G L G+ +H Y + + I +L++LY KC + +A +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
F + +VV WNVM+ Y + D + I+ M+ P+ T+ S+L C +L L
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAY 485
E G++IH+ II++ + N V L+DMYAK G +D A+ + +D+VSWT+MIA Y
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 486 GSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGY-YFNLMISEYNIQP 544
+ +AL F +M R D + +SAC+ + EG + +S ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 545 RNEHYSCLIDLLGRAGRLQEAYGILQST 572
+ + L+ L R G+++E+Y + T
Sbjct: 627 PFQ--NALVTLYSRCGKIEESYLAFEQT 652
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 248/498 (49%), Gaps = 7/498 (1%)
Query: 78 ASYTKNYMYITALELFDML----LQNPYLKPDSYTYPSVLKAC-GGLGSVGIGKMIHTHL 132
AS+ +YI+ E F ++N ++P+ T +L+ C GS+ G+ +H+ +
Sbjct: 52 ASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 111
Query: 133 IKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKAL 192
+K G + ++ Y A K+FDEM ER + +WN +I +
Sbjct: 112 LKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVF 171
Query: 193 ELFKKMRGSGFQPNSVTLTTVISSC-ARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDM 251
LF +M PN T + V+ +C + D ++IH + G + + + L+D+
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 252 YGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTI 311
Y + G +++AR VF+ LK +W A+I+G S ++LF M GI PT
Sbjct: 232 YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAF 291
Query: 312 SSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSK 371
SSVL +C + L+ G+ +HG +++ D ++ ++L+ LYF G + SAE++F MS+
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 372 TDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEI 431
D V +N +I+G G KA+ ++ M G +PD+ T S++ ACS L +G+++
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 432 HNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRA 491
H + + +N + GALL++YAKC ++ A F E ++V W M+ AYG
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 492 LEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSC 551
+ ++F +MQ P+ T+ ++L C G + E G + I + N Q S
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 552 LIDLLGRAGRLQEAYGIL 569
LID+ + G+L A+ IL
Sbjct: 531 LIDMYAKLGKLDTAWDIL 548
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 214/475 (45%), Gaps = 39/475 (8%)
Query: 202 GFQPNSVTLTTVISSCARLM-DLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEM 260
G +PN TL ++ C + LD G+++H + +K G S+ +S L D Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 261 AREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSR 320
A +VF++ +++ WN +I +SR LF RM E + P T S VL +C R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-R 197
Query: 321 SGQLKHGKV--MHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWN 378
G + V +H I+ ++ + + LIDLY + G V A VF+ + D W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 379 VMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIES 438
MISG +A+ ++ DM +G P F+SVL AC ++ +LE G+++H +++
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 439 KLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLF 498
++ V AL+ +Y G + A +F+ + +RD V++ ++I G +A++LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 499 GEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGR 558
M PDS T +L+ ACS G + G + ++ N+ L++L +
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 559 AGRLQE---------------------AYGILQ------------STPEIREDAGLLSTL 585
++ AYG+L EI + ++
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 586 FSACRLHRDIEMGEKIAKLLIEKDPD-DSSTYIVLSNMYASVKKWDEVRKIRLKM 639
C D+E+GE+I +I+ + ++ VL +MYA + K D I ++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 394/693 (56%), Gaps = 14/693 (2%)
Query: 3 ITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFK 62
I + TL R CT +L+ K +H ++V N+ + L+NLY N A F
Sbjct: 54 IDDVHTLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFD 110
Query: 63 TIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSV 122
I N D+ WN +++ Y + + F + + + L PD T+PSVLKAC +V
Sbjct: 111 HIQNR-DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TV 166
Query: 123 GIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCY 182
G IH +K GF+ DV +A+S +Y++ + A +FDEM RD+ SWN +IS Y
Sbjct: 167 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 183 YQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDS 242
Q G A++AL L +R +SVT+ +++S+C D +RG IH IK G S+
Sbjct: 227 CQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEE 302
++S+ L+D+Y + G L ++VF++ ++ +++WN++I Y + LF M
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 303 GIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNK-IQGDVFINSSLIDLYFKCGRVSS 361
I+P T+ S+ S+ G ++ + + G+ +R D+ I ++++ +Y K G V S
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGA-KPDAVTFTSVLPACS 420
A VF + TDV+ WN +ISGY G +A+ +Y+ M+E G + T+ SVLPACS
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480
Q AL +G ++H ++++ L + V+ +L DMY KCG +++A +F ++P + V W +
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEY 540
+IA +G HG +A+ LF EM +PD ITF+ LLSACSH+G VDEG + F +M ++Y
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 582
Query: 541 NIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEK 600
I P +HY C++D+ GRAG+L+ A ++S ++ DA + L SACR+H ++++G+
Sbjct: 583 GITPSLKHYGCMVDMYGRAGQLETALKFIKSM-SLQPDASIWGALLSACRVHGNVDLGKI 641
Query: 601 IAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQ 660
++ L E +P+ +++LSNMYAS KW+ V +IR GLRK PG S +E+ ++++
Sbjct: 642 ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 701
Query: 661 PFFAEDKFYPQADMVYECLAILAGHMEKDELLP 693
F+ ++ +P + +Y L L ++ +P
Sbjct: 702 VFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 225/494 (45%), Gaps = 57/494 (11%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
M+ +++LL CT + G IH + GL++ + + LI+LY V
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGL 119
F + DL WN ++ +Y N + A+ LF +M L ++PD T S+ L
Sbjct: 305 FDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR--IQPDCLTLISLASILSQL 361
Query: 120 GSVGIGKMIHTHLIKTG-FLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTV 178
G + + + ++ G FL D+ I ++ MYAK + A +F+ + DV SWNT+
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 179 ISCYYQDGQAEKALELFKKMRGSG-FQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDG 237
IS Y Q+G A +A+E++ M G N T +V+ +C++ L +G ++H +K+G
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 238 FVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFW 297
D ++ ++L DMYGKCG LE A +F Q + V WN LIA + G + V LF
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 298 RMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSL------ID 351
M +EG+KP T ++L +CS SG + G+ +Q D I SL +D
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF-----EMMQTDYGITPSLKHYGCMVD 596
Query: 352 LYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVT 411
+Y + G++ +A + MS +PDA
Sbjct: 597 MYGRAGQLETALKFIKSMS----------------------------------LQPDASI 622
Query: 412 FTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALL-DMYAKCG---AVDEAFKVF 467
+ ++L AC ++ GK H+ E +E + LL +MYA G VDE +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFE--VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA 680
Query: 468 NELPERDLVSWTSM 481
+ R W+SM
Sbjct: 681 HGKGLRKTPGWSSM 694
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/654 (35%), Positives = 374/654 (57%), Gaps = 7/654 (1%)
Query: 29 VVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTKNYMYIT 88
+V G ++ + LI+ Y N DYA LVF + ++ W +++ K
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT-WTTMISGCVKMGRSYV 232
Query: 89 ALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTA 148
+L+LF L+++ + PD Y +VL AC L + GK IH H+++ G +D + +
Sbjct: 233 SLQLFYQLMEDNVV-PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 149 GMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSV 208
Y KC A K+F+ M +++ SW T++S Y Q+ ++A+ELF M G +P+
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 209 TLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQT 268
+++++SCA L L G ++H IK +DSY++++L+DMY KC CL AR+VF+
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 269 VLKSVVAWNALIAGYSSRG---DSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLK 325
VV +NA+I GYS G + + +F M I+P+L T S+L + + L
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 326 HGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYV 385
K +HG + + + D+F S+LID+Y C + + VF++M D+V WN M +GYV
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 386 TVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEI 445
+ +AL ++ +++ +PD TF +++ A LA+++ G+E H +++ LE N
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 446 VMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSN 505
+ ALLDMYAKCG+ ++A K F+ RD+V W S+I++Y +HG +AL++ +M
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 506 ARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEA 565
P+ ITF+ +LSACSHAG V++G F LM+ + I+P EHY C++ LLGRAGRL +A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 566 YGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYAS 625
+++ P + A + +L S C ++E+ E A++ I DP DS ++ +LSN+YAS
Sbjct: 711 RELIEKMP-TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 769
Query: 626 VKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECL 679
W E +K+R +MK G+ K PG SWI I + F ++DK + +A+ +YE L
Sbjct: 770 KGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVL 823
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/554 (29%), Positives = 292/554 (52%), Gaps = 7/554 (1%)
Query: 24 IIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTKN 83
++H +++ GL+ + L LINLY YA VF+ + +L W+ ++++ +
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER-NLVSWSTMVSACNHH 123
Query: 84 YMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVG--IGKMIHTHLIKTGFLLDV 141
+Y +L +F + P+ Y S ++AC GL G + + + L+K+GF DV
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 142 VIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGS 201
+ + Y K + + A +FD + E+ +W T+IS + G++ +L+LF ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 202 GFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMA 261
P+ L+TV+S+C+ L L+ GK+IH ++ G D+ + + L+D Y KCG + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 262 REVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRS 321
++F K++++W L++GY K ++LF M++ G+KP + SS+L SC+
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 322 GQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMI 381
L G +H Y I+ + D ++ +SLID+Y KC ++ A VF+ + DVV +N MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 382 SGYVTVG---DYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIES 438
GY +G + +AL I+ DM+ +P +TF S+L A + L +L K+IH + +
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 439 KLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLF 498
L + AL+D+Y+ C + ++ VF+E+ +DLV W SM A Y EAL LF
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 499 GEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGR 558
E+Q S RPD TF +++A + V + G F+ + + ++ + L+D+ +
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASV-QLGQEFHCQLLKRGLECNPYITNALLDMYAK 602
Query: 559 AGRLQEAYGILQST 572
G ++A+ S
Sbjct: 603 CGSPEDAHKAFDSA 616
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/523 (29%), Positives = 262/523 (50%), Gaps = 39/523 (7%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
T+L C+ L+ GK IH ++ GL+ + +L LI+ Y C A +F + N
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+S W L++ Y +N ++ A+ELF + + LKPD Y S+L +C L ++G G
Sbjct: 314 NIIS-WTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQ 371
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG- 186
+H + IK D + +S MYAKC+ A K+FD + DV +N +I Y + G
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 187 --QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYI 244
+ +AL +F+ MR +P+ +T +++ + A L L K+IH K G D +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGI 304
SAL+D+Y C CL+ +R VF++ +K +V WN++ AGY + +++ + LF +
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 305 KPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAEN 364
+P T ++++ + ++ G+ H +++ ++ + +I ++L+D+Y KCG A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 365 VFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAA 424
F+ + DVV WN +IS Y G+ KAL + M G +P+ +TF VL ACS
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS---- 667
Query: 425 LEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAA 484
H ++E L+ E+++ F PE + + M++
Sbjct: 668 -------HAGLVEDGLKQFELMLR------------------FGIEPETE--HYVCMVSL 700
Query: 485 YGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVD 527
G GR +A +L +M +P +I + +LLS C+ AG V+
Sbjct: 701 LGRAGRLNKARELIEKMP---TKPAAIVWRSLLSGCAKAGNVE 740
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 135/255 (52%), Gaps = 8/255 (3%)
Query: 324 LKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISG 383
L + V+HG II ++ D ++++ LI+LY + G + A VFEKM + ++V W+ M+S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 384 YVTVGDYFKALAIYSDM-KEVGAKPDAVTFTSVLPACSQLAALEKGK----EIHNHIIES 438
G Y ++L ++ + + P+ +S + ACS L +G+ ++ + +++S
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKS 177
Query: 439 KLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLF 498
+ + V L+D Y K G +D A VF+ LPE+ V+WT+MI+ GR+ +L+LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 499 GEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGR 558
++ + N PD +LSACS ++ EGG + I Y ++ + LID +
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 559 AGRLQEAYGILQSTP 573
GR+ A+ + P
Sbjct: 297 CGRVIAAHKLFNGMP 311
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/683 (33%), Positives = 382/683 (55%), Gaps = 8/683 (1%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+ L+R C ++ +EG ++ ++ + L + + ++ N A VF +
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+L WN L+ Y K + A+ L+ +L +KPD YT+P VL+ CGG+ + G
Sbjct: 157 ER-NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
K +H H+++ G+ LD+ + ++ MY KC + A +FD M RD+ SWN +IS Y+++
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
G + LELF MRG P+ +TLT+VIS+C L D G++IH I GF D +
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
++L MY G A ++F + K +V+W +I+GY + + M+++ +K
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P T+++VL +C+ G L G +H I+ ++ V + ++LI++Y KC + A ++
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
F + + +V+ W +I+G F+AL MK + +P+A+T T+ L AC+++ AL
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGAL 514
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAY 485
GKEIH H++ + + ++ + ALLDMY +CG ++ A+ FN ++D+ SW ++ Y
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGY 573
Query: 486 GSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPR 545
G+ ++LF M +S RPD ITF++LL CS + V +G YF+ M +Y + P
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPN 632
Query: 546 NEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLL 605
+HY+C++DLLGRAG LQEA+ +Q P + D + L +ACR+H I++GE A+ +
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMP-VTPDPAVWGALLNACRIHHKIDLGELSAQHI 691
Query: 606 IEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAE 665
E D YI+L N+YA KW EV K+R MKE GL + GCSW+E+ ++ F ++
Sbjct: 692 FELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSD 751
Query: 666 DKFYPQADMVYECLAILAGHMEK 688
DK++PQ E +L G EK
Sbjct: 752 DKYHPQTK---EINTVLEGFYEK 771
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 226/409 (55%), Gaps = 1/409 (0%)
Query: 97 LQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNS 156
+Q + D + ++++ C + G +++ + + L V + ++ M+ + +
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGN 144
Query: 157 FECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRG-SGFQPNSVTLTTVIS 215
A +F +MSER++ SWN ++ Y + G ++A+ L+ +M G +P+ T V+
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 216 SCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVA 275
+C + DL RGKE+H ++ G+ D + +AL+ MY KCG ++ AR +F++ + +++
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 276 WNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYII 335
WNA+I+GY G ++LF+ M + P L T++SV+ +C G + G+ +H Y+I
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 336 RNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALA 395
D+ + +SL +Y G AE +F +M + D+V W MISGY KA+
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 396 IYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYA 455
Y M + KPD +T +VL AC+ L L+ G E+H I+++L + IV L++MY+
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 456 KCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQS 504
KC +D+A +F+ +P ++++SWTS+IA + R EAL +M+ +
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 230/475 (48%), Gaps = 41/475 (8%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
++ + +++ C + G+ IH V+T G +I++C SL +Y + ++ A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
++ D+ W +++ Y N++ A++ + M+ Q+ +KPD T +VL AC LG
Sbjct: 356 SRMERK-DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS-VKPDEITVAAVLSACATLGD 413
Query: 122 VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISC 181
+ G +H IK + V++A++ MY+KC + A+ +F + ++V SW ++I+
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 182 YYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD 241
+ + +AL ++M+ + QPN++TLT +++CAR+ L GKEIH ++ G D
Sbjct: 474 LRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 242 SYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNE 301
++ +AL+DMY +CG + A F + K V +WN L+ GYS RG V+LF RM +
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 302 EGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
++P T S+L CS+S ++ G + + + ++ + ++DL + G +
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQ 421
A +KM T PD + ++L AC
Sbjct: 652 AHKFIQKMPVT----------------------------------PDPAVWGALLNACRI 677
Query: 422 LAALEKGKEIHNHIIESKLETNEIVMGALL-DMYAKCGAVDEAFKVFNELPERDL 475
++ G+ HI E L+ + LL ++YA CG E KV + E L
Sbjct: 678 HHKIDLGELSAQHIFE--LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 1/246 (0%)
Query: 280 IAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKI 339
+ G + G + +KL M E + +++ C + G ++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 340 QGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSD 399
V + ++ + ++ + G + A VF KMS+ ++ WNV++ GY G + +A+ +Y
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 400 MKEVGA-KPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCG 458
M VG KPD TF VL C + L +GKE+H H++ E + V+ AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 459 AVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLS 518
V A +F+ +P RD++SW +MI+ Y +G E L+LF M+ + PD +T +++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 519 ACSHAG 524
AC G
Sbjct: 306 ACELLG 311
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 38/297 (12%)
Query: 381 ISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKL 440
+ G G +A+ + + M+E+ D F +++ C A E+G ++++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 441 ETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGE 500
+ A L M+ + G + +A+ VF ++ ER+L SW ++ Y G EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 501 M-QQSNARPDSITFLALLSACSHAGWVDEG-GYYFNLMISEYNIQPRNEHYSCLIDLLGR 558
M +PD TF +L C G D G ++ + Y + + + LI + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 559 AGRLQEAYGILQSTPE---------------------------------IREDAGLLSTL 585
G ++ A + P + D L+++
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 586 FSACRLHRDIEMGEKIAKLLIEKD-PDDSSTYIVLSNMYASVKKWDEVRKIRLKMKE 641
SAC L D +G I +I D S L+ MY + W E K+ +M+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/685 (32%), Positives = 385/685 (56%), Gaps = 6/685 (0%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
+++ C G + G +H VV GL ++ + +L++ Y + A+ +F +
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER- 251
Query: 69 DLSLWNGLMASYTKN-YMYITALELFDMLLQNP--YLKPDSYTYPSVLKACGGLGSVGIG 125
+L WN ++ ++ N + + L L +M+ +N PD T +VL C +G+G
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
K +H +K ++V+ ++ MY+KC A +F + ++V SWNT++ + +
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 371
Query: 186 GQAEKALELFKKMRGSG--FQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
G ++ ++M G + + VT+ + C L KE+H +K FV +
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 431
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
+++A V Y KCG L A+ VF K+V +WNALI G++ D + + +M G
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 491
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
+ P T+ S+L +CS+ L+ GK +HG+IIRN ++ D+F+ S++ LY CG + + +
Sbjct: 492 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 551
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLA 423
+F+ M +V WN +I+GY+ G +AL ++ M G + ++ V ACS L
Sbjct: 552 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 611
Query: 424 ALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIA 483
+L G+E H + ++ LE + + +L+DMYAK G++ ++ KVFN L E+ SW +MI
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 484 AYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQ 543
YG HG A EA+KLF EMQ++ PD +TFL +L+AC+H+G + EG Y + M S + ++
Sbjct: 672 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 731
Query: 544 PRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAK 603
P +HY+C+ID+LGRAG+L +A ++ D G+ +L S+CR+H+++EMGEK+A
Sbjct: 732 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 791
Query: 604 LLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFF 663
L E +P+ Y++LSN+YA + KW++VRK+R +M E+ LRK+ GCSWIE+ ++ F
Sbjct: 792 KLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 851
Query: 664 AEDKFYPQADMVYECLAILAGHMEK 688
++F + + +IL + K
Sbjct: 852 VGERFLDGFEEIKSLWSILEMKISK 876
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 279/520 (53%), Gaps = 8/520 (1%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVV-TLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
LL+ K ++ G+ IHQ V + L+N+ LC +I +Y C + D + VF + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+L WN +++SY++N +Y LE F ++ L PD +TYP V+KAC G+ VGIG
Sbjct: 150 -NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
+H ++KTG + DV + ++ Y A+++FD M ER++ SWN++I + +G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 188 AEKALELFKKM---RGSG-FQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
+E++ L +M G G F P+ TL TV+ CAR ++ GK +H +K +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM--NE 301
+++AL+DMY KCGC+ A+ +F+ K+VV+WN ++ G+S+ GD+ + +M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 302 EGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
E +K TI + + C L K +H Y ++ + + + ++ + Y KCG +S
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQ 421
A+ VF + V WN +I G+ D +L + MK G PD+ T S+L ACS+
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 422 LAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSM 481
L +L GKE+H II + LE + V ++L +Y CG + +F+ + ++ LVSW ++
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 482 IAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACS 521
I Y +G AL +F +M + I+ + + ACS
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 13/283 (4%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+ +LL C+ KSL+ GK +H ++ L+ ++ + S+++LY C +F ++
Sbjct: 499 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 558
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
+ L WN ++ Y +N AL +F M+L L S V AC L S+ +
Sbjct: 559 DK-SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM--PVFGACSLLPSLRL 615
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
G+ H + +K D IA S MYAK S + K+F+ + E+ ASWN +I Y
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRG----KEIHKEFIKDGFVS 240
G A++A++LF++M+ +G P+ +T V+++C + G ++ F G
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKP 732
Query: 241 DSYISSALVDMYGKCGCLEMAREVF--EQTVLKSVVAWNALIA 281
+ + ++DM G+ G L+ A V E + V W +L++
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 373/656 (56%), Gaps = 11/656 (1%)
Query: 7 LTLLRTCTGSKSLKEGKIIHQKVV--TLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTI 64
L+LL TC S++L G++IHQ ++ +L L ++ L +L LY SC + A VF I
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLV-NLTRLYASCNEVELARHVFDEI 61
Query: 65 DNP-LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVG 123
+P ++ W+ ++ +Y N AL+L+ +L N ++P YTYP VLKAC GL ++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKML-NSGVRPTKYTYPFVLKACAGLRAID 120
Query: 124 IGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYY 183
GK+IH+H+ + F D+ + ++ YAKC E A+K+FDEM +RD+ +WN +IS +
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 184 QDGQAEKALELFKKMRG-SGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDS 242
+ LF MR G PN T+ + + R L GK +H + GF +D
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM--N 300
+ + ++D+Y K C+ AR VF+ K+ V W+A+I GY K ++F++M N
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360
+ T I +LM C+R G L G+ +H Y ++ D+ + +++I Y K G +
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420
A F ++ DV+ +N +I+G V ++ ++ +M+ G +PD T VL ACS
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480
LAAL G H + + N + AL+DMY KCG +D A +VF+ + +RD+VSW +
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMI-SE 539
M+ +G HG EAL LF MQ++ PD +T LA+LSACSH+G VDEG FN M +
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
Query: 540 YNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGE 599
+N+ PR +HY+C+ DLL RAG L EAY + P D +L TL SAC +++ E+G
Sbjct: 541 FNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMP-FEPDIRVLGTLLSACWTYKNAELGN 599
Query: 600 KIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEI 655
+++K + + + + + ++LSN Y++ ++W++ +IR+ K+ GL K PG SW+++
Sbjct: 600 EVSKKM-QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 412 FTSVLPACSQLAALEKGKEIHNHIIESKLE-TNEIVMGALLDMYAKCGAVDEAFKVFNEL 470
F S+L C + L G+ IH H+++ L ++ V+ L +YA C V+ A VF+E+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 471 PERDL--VSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDE 528
P + ++W MI AY S+ A +AL L+ +M S RP T+ +L AC+ +D+
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 529 GGYYFNLMISEYNIQP-RNEHYSC--LIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTL 585
G L+ S N + Y C L+D + G L+ A + P + D + +
Sbjct: 122 G----KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP--KRDMVAWNAM 175
Query: 586 FSACRLH 592
S LH
Sbjct: 176 ISGFSLH 182
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 374/657 (56%), Gaps = 73/657 (11%)
Query: 105 DSYTYPSVLKAC--GGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVK 162
DS + +L +C L ++ + + +H +IK+GF ++ I + Y+KC S E +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 163 MFDEMS-------------------------------ERDVASWNTVISCYYQDGQAEKA 191
+FD+M ERD +WN+++S + Q + E+A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 192 LELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDM 251
L F M GF N + +V+S+C+ L D+++G ++H K F+SD YI SALVDM
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 252 YGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTI 311
Y KCG + A+ VF++ ++VV+WN+LI + G + + +F M E ++P T+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 312 SSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSAENVFE--- 367
+SV+ +C+ +K G+ +HG +++N K++ D+ ++++ +D+Y KC R+ A +F+
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 368 ----------------------------KMSKTDVVYWNVMISGYVTVGDYFKALAIYSD 399
KM++ +VV WN +I+GY G+ +AL+++
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 400 MKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKL-----ETNEIVMG-ALLDM 453
+K P +F ++L AC+ LA L G + H H+++ E ++I +G +L+DM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 454 YAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITF 513
Y KCG V+E + VF ++ ERD VSW +MI + +G EAL+LF EM +S +PD IT
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 514 LALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTP 573
+ +LSAC HAG+V+EG +YF+ M ++ + P +HY+C++DLLGRAG L+EA +++ P
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 574 EIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVR 633
++ D+ + +L +AC++HR+I +G+ +A+ L+E +P +S Y++LSNMYA + KW++V
Sbjct: 557 -MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 634 KIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKDE 690
+R M++ G+ K PGCSWI+I F +DK +P+ ++ L IL M ++
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQ 672
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 289/579 (49%), Gaps = 85/579 (14%)
Query: 9 LLRTCTGSK-SLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN- 66
LL +C SK S + +H V+ G N I + LI+ Y C + + VF +
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 67 -----------------------------PLDLSLWNGLMASYTKNYMYITALELFDMLL 97
D WN +++ + ++ AL F M+
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 98 QNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSF 157
+ ++ + Y++ SVL AC GL + G +H+ + K+ FL DV I S+ MY+KC +
Sbjct: 145 KEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 158 ECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSC 217
A ++FDEM +R+V SWN++I+C+ Q+G A +AL++F+ M S +P+ VTL +VIS+C
Sbjct: 204 NDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 218 ARLMDLDRGKEIHKEFIK-DGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVA- 275
A L + G+E+H +K D +D +S+A VDMY KC ++ AR +F+ +++V+A
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 276 ------------------------------WNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
WNALIAGY+ G+++ + LF + E +
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 306 PTLTTISSVLMSCSRSGQLKHGK------VMHGYIIRNKIQGDVFINSSLIDLYFKCGRV 359
PT + +++L +C+ +L G + HG+ ++ + D+F+ +SLID+Y KCG V
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 360 SSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPAC 419
VF KM + D V WN MI G+ G +AL ++ +M E G KPD +T VL AC
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 420 SQLAALEKGKEIHNHIIE----SKLETNEIVMGALLDMYAKCGAVDEAFKVFNELP-ERD 474
+E+G+ + + + L + M +D+ + G ++EA + E+P + D
Sbjct: 504 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCM---VDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 475 LVSWTSMIAAYGSH-----GRALEALKLFGEMQQSNARP 508
V W S++AA H G+ + A KL E++ SN+ P
Sbjct: 561 SVIWGSLLAACKVHRNITLGKYV-AEKLL-EVEPSNSGP 597
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 220/435 (50%), Gaps = 47/435 (10%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
+N ++L C+G + +G +H + +++ + +L+++Y C N + A V
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F + + +S WN L+ + +N + AL++F M+L++ ++PD T SV+ AC L
Sbjct: 210 FDEMGDRNVVS-WNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASVISACASLS 267
Query: 121 SVGIGKMIHTHLIKTGFLL-DVVIASSTAGMYAKCN------------------------ 155
++ +G+ +H ++K L D++++++ MYAKC+
Sbjct: 268 AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMI 327
Query: 156 -------SFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSV 208
S + A MF +M+ER+V SWN +I+ Y Q+G+ E+AL LF ++ P
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 209 TLTTVISSCARLMDLDRGKEIHKEFIKDGFV------SDSYISSALVDMYGKCGCLEMAR 262
+ ++ +CA L +L G + H +K GF D ++ ++L+DMY KCGC+E
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 263 EVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSG 322
VF + + + V+WNA+I G++ G ++LF M E G KP T+ VL +C +G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Query: 323 QLKHGKVMHGYIIRNKIQGDVFIN-SSLIDLYFKCGRVSSAENVFEKMS-KTDVVYWNVM 380
++ G+ + R+ + + + ++DL + G + A+++ E+M + D V W +
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 381 ISG-----YVTVGDY 390
++ +T+G Y
Sbjct: 568 LAACKVHRNITLGKY 582
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/678 (35%), Positives = 378/678 (55%), Gaps = 4/678 (0%)
Query: 15 GSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWN 74
G+ +EGK IH ++ L + L +LI++YF A VF I++ ++ LWN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 75 GLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIK 134
++ + + + ++L+L+ ML +N +K S ++ L AC + G G+ IH ++K
Sbjct: 242 VMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 135 TGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALEL 194
G D + +S MY+KC A +F + ++ + WN +++ Y ++ AL+L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 195 FKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGK 254
F MR P+S TL+ VIS C+ L + GK +H E K S S I SAL+ +Y K
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 255 CGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM--NEEGIKPTLTTIS 312
CGC A VF+ K +VAW +LI+G G K +K+F M +++ +KP ++
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 313 SVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKT 372
SV +C+ L+ G +HG +I+ + +VF+ SSLIDLY KCG A VF MS
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 373 DVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIH 432
++V WN MIS Y ++ +++ M G PD+V+ TSVL A S A+L KGK +H
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 433 NHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRAL 492
+ + + ++ + AL+DMY KCG A +F ++ + L++W MI YGSHG +
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCI 660
Query: 493 EALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCL 552
AL LF EM+++ PD +TFL+L+SAC+H+G+V+EG F M +Y I+P EHY+ +
Sbjct: 661 TALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANM 720
Query: 553 IDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDD 612
+DLLGRAG L+EAY +++ P I D+ + L SA R H ++E+G A+ L+ +P+
Sbjct: 721 VDLLGRAGLLEEAYSFIKAMP-IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 613 SSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQA 672
STY+ L N+Y +E K+ MKE GL K PGCSWIE+ DR FF+ P
Sbjct: 780 GSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMK 839
Query: 673 DMVYECLAILAGHMEKDE 690
++ L L +M ++
Sbjct: 840 AEIFNVLNRLKSNMVDED 857
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 291/541 (53%), Gaps = 15/541 (2%)
Query: 4 TRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKT 63
T L C+ S++ G+ IH VV +GL N+ +C SL+++Y C A VF
Sbjct: 273 TSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 64 IDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVG 123
+ + L +WN ++A+Y +N +AL+LF + Q L PDS+T +V+ C LG
Sbjct: 333 VVDK-RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYN 390
Query: 124 IGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYY 183
GK +H L K I S+ +Y+KC A +F M E+D+ +W ++IS
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 184 QDGQAEKALELFKKMRGS--GFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD 241
++G+ ++AL++F M+ +P+S +T+V ++CA L L G ++H IK G V +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 242 SYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNE 301
++ S+L+D+Y KCG EMA +VF +++VAWN++I+ YS + + LF M
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 302 EGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
+GI P +I+SVL++ S + L GK +HGY +R I D + ++LID+Y KCG
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQ 421
AEN+F+KM ++ WN+MI GY + GD AL+++ +MK+ G PD VTF S++ AC+
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 422 LAALEKGKEIHNHIIES-KLETNEIVMGALLDMYAKCGAVDEAFKVFNELP-ERDLVSWT 479
+E+GK I + + +E N ++D+ + G ++EA+ +P E D W
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWL 750
Query: 480 SMIAAYGSHGRA----LEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNL 535
+++A +H L A KL M+ T++ L++ AG +E L
Sbjct: 751 CLLSASRTHHNVELGILSAEKLL-RMEPERGS----TYVQLINLYMEAGLKNEAAKLLGL 805
Query: 536 M 536
M
Sbjct: 806 M 806
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 295/579 (50%), Gaps = 23/579 (3%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF------ 61
+LL+ C+ +L GK IH VV LG + + + SL+N+Y C DYA+ VF
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
++ + D+++WN ++ Y K + + F +L ++PD+++ V+ G+
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG-VRPDAFSLSIVVSVMCKEGN 183
Query: 122 VGI--GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSER-DVASWNTV 178
GK IH +++ D + ++ MY K A ++F E+ ++ +V WN +
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 179 ISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF 238
I + G E +L+L+ + + + S + T + +C++ + G++IH + +K G
Sbjct: 244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL 303
Query: 239 VSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWR 298
+D Y+ ++L+ MY KCG + A VF V K + WNA++A Y+ S + LF
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 299 MNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGR 358
M ++ + P T+S+V+ CS G +GK +H + + IQ I S+L+ LY KCG
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 359 VSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMK--EVGAKPDAVTFTSVL 416
A VF+ M + D+V W +ISG G + +AL ++ DMK + KPD+ TSV
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 417 PACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLV 476
AC+ L AL G ++H +I++ L N V +L+D+Y+KCG + A KVF + ++V
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 477 SWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEG----GYY 532
+W SMI+ Y + ++ LF M PDS++ ++L A S + +G GY
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 533 FNLMISEYNIQPRNEHY-SCLIDLLGRAGRLQEAYGILQ 570
L I P + H + LID+ + G + A I +
Sbjct: 604 LRLGI------PSDTHLKNALIDMYVKCGFSKYAENIFK 636
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 244/448 (54%), Gaps = 12/448 (2%)
Query: 86 YITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIAS 145
Y+ AL L+ + +T+PS+LKAC L ++ GK IH ++ G+ D IA+
Sbjct: 40 YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT 99
Query: 146 STAGMYAKCNSFECAVKMFDEMSE-------RDVASWNTVISCYYQDGQAEKALELFKKM 198
S MY KC + AV++FD S+ RDV WN++I Y++ + ++ + F++M
Sbjct: 100 SLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRM 159
Query: 199 RGSGFQPNSVTLTTVISSCARLMDLDR--GKEIHKEFIKDGFVSDSYISSALVDMYGKCG 256
G +P++ +L+ V+S + + R GK+IH +++ +DS++ +AL+DMY K G
Sbjct: 160 LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFG 219
Query: 257 CLEMAREVFEQTVLKS-VVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVL 315
A VF + KS VV WN +I G+ G +S + L+ +K T+ + L
Sbjct: 220 LSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 316 MSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVV 375
+CS+S G+ +H +++ + D ++ +SL+ +Y KCG V AE VF + +
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 376 YWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHI 435
WN M++ Y + AL ++ M++ PD+ T ++V+ CS L GK +H +
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 436 IESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEAL 495
+ +++ + ALL +Y+KCG +A+ VF + E+D+V+W S+I+ +G+ EAL
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 496 KLFGEMQQSN--ARPDSITFLALLSACS 521
K+FG+M+ + +PDS ++ +AC+
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACA 487
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/690 (35%), Positives = 403/690 (58%), Gaps = 10/690 (1%)
Query: 8 TLLRTCTGSKS-LKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
++LR C GS+ L G +H +++ G+ ++ + SL+ +Y N A VF +
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM-- 162
Query: 67 PL-DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
P+ DL W+ L++S +N + AL +F ++ + ++PD+ T SV++ C LG + I
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIA 221
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ +H + + F LD + +S MY+KC + ++F+++++++ SW +IS Y +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD-SYI 244
+EKAL F +M SG +PN VTL +V+SSC + + GK +H ++ + +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGI 304
S ALV++Y +CG L V +++VAWN+LI+ Y+ RG + LF +M + I
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 305 KPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAEN 364
KP T++S + +C +G + GK +HG++IR + D F+ +SLID+Y K G V SA
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSAST 460
Query: 365 VFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAA 424
VF ++ VV WN M+ G+ G+ +A++++ M + + VTF +V+ ACS + +
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 425 LEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAA 484
LEKGK +H+ +I S L+ + AL+DMYAKCG ++ A VF + R +VSW+SMI A
Sbjct: 521 LEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINA 579
Query: 485 YGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQP 544
YG HGR A+ F +M +S +P+ + F+ +LSAC H+G V+EG YYFNLM S + + P
Sbjct: 580 YGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSP 638
Query: 545 RNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKL 604
+EH++C IDLL R+G L+EAY ++ P + DA + +L + CR+H+ +++ + I
Sbjct: 639 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFL-ADASVWGSLVNGCRIHQKMDIIKAIKND 697
Query: 605 LIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFA 664
L + DD+ Y +LSN+YA +W+E R++R MK L+K PG S IEI ++ F A
Sbjct: 698 LSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGA 757
Query: 665 EDKFYPQADMVYECLAILAGHMEKDELLPS 694
++ Q D +Y L L ++ ++ S
Sbjct: 758 GEENRIQTDEIYRFLGNLQNLTNEEHVVDS 787
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 314/574 (54%), Gaps = 15/574 (2%)
Query: 3 ITRILTLLRTCTGSKSLKEGKIIHQKVVTLG-LQNNIALCKSLINLYFSCQNYDYAMLVF 61
+T+ + L R+C+ SL+ +H ++ G L+ + LI Y + D + LVF
Sbjct: 1 MTQYMPLFRSCS---SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVF 57
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGG-LG 120
+ P D ++ L+ ++ A++L+ L+ + + +PSVL+AC G
Sbjct: 58 EAFPYP-DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSET-TQISKFVFPSVLRACAGSRE 115
Query: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
+ +G +H +IK G D VI +S MY + + A K+FD M RD+ +W+T++S
Sbjct: 116 HLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS 175
Query: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVS 240
++G+ KAL +FK M G +P++VT+ +V+ CA L L + +H + + F
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMN 300
D + ++L+ MY KCG L + +FE+ K+ V+W A+I+ Y+ S+ ++ F M
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDV-FINSSLIDLYFKCGRV 359
+ GI+P L T+ SVL SC G ++ GK +HG+ +R ++ + ++ +L++LY +CG++
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL 355
Query: 360 SSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPAC 419
S E V +S ++V WN +IS Y G +AL ++ M KPDA T S + AC
Sbjct: 356 SDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 420 SQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWT 479
+ GK+IH H+I + + ++E V +L+DMY+K G+VD A VFN++ R +V+W
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 480 SMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISE 539
SM+ + +G ++EA+ LF M S + +TFLA++ ACS G +++G + + +I
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-- 532
Query: 540 YNIQPRNEHY--SCLIDLLGRAGRLQEAYGILQS 571
I + + + LID+ + G L A + ++
Sbjct: 533 --ISGLKDLFTDTALIDMYAKCGDLNAAETVFRA 564
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
MN L +++ C+ SL++GK +H K++ GL+ ++ +LI++Y C + + A V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETV 561
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F+ + + +S + ++ +Y + +A+ F+ ++++ KP+ + +VL ACG G
Sbjct: 562 FRAMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESG-TKPNEVVFMNVLSACGHSG 619
Query: 121 SVGIGK 126
SV GK
Sbjct: 620 SVEEGK 625
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/700 (31%), Positives = 381/700 (54%), Gaps = 25/700 (3%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
+L+ C+ + G IH VV +G ++ +L+++Y + + ++ VF+ I
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
+S W+ ++A +N + AL+ F + Q Y SVL++C L + +G +
Sbjct: 246 SVS-WSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
H H +K+ F D ++ ++T MYAKC++ + A +FD + S+N +I+ Y Q+
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
KAL LF ++ SG + ++L+ V +CA + L G +I+ IK D +++A
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
+DMYGKC L A VF++ + V+WNA+IA + G + LF M I+P
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV--- 365
T S+L +C+ G L +G +H I+++ + + + SLID+Y KCG + AE +
Sbjct: 484 FTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 366 -------------FEKMSKTDV----VYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPD 408
EKM + V WN +ISGYV A +++ M E+G PD
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 409 AVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFN 468
T+ +VL C+ LA+ GK+IH +I+ +L+++ + L+DMY+KCG + ++ +F
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 662
Query: 469 ELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDE 528
+ RD V+W +MI Y HG+ EA++LF M N +P+ +TF+++L AC+H G +D+
Sbjct: 663 KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDK 722
Query: 529 GGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSA 588
G YF +M +Y + P+ HYS ++D+LG++G+++ A +++ P D + TL
Sbjct: 723 GLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP-FEADDVIWRTLLGV 781
Query: 589 CRLHR-DIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKN 647
C +HR ++E+ E+ L+ DP DSS Y +LSN+YA W++V +R M+ L+K
Sbjct: 782 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841
Query: 648 PGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHME 687
PGCSW+E+ D + F DK +P+ + +YE L ++ M+
Sbjct: 842 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/631 (25%), Positives = 303/631 (48%), Gaps = 61/631 (9%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
++ T + + C +L+ GK H ++ G + + L+ +Y + +++ A +V
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 61 FKTIDNPL-DLSLWNGLMASYTKNYMYITALELFDML---------------LQNPY--- 101
F + PL D+ WN ++ Y+K+ A F+M+ LQN
Sbjct: 106 FDKM--PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 102 ------------LKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAG 149
++ D T+ +LK C L +G IH +++ G DVV AS+
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 150 MYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVT 209
MYAK F ++++F + E++ SW+ +I+ Q+ AL+ FK+M+ +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 210 LTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTV 269
+V+ SCA L +L G ++H +K F +D + +A +DMY KC ++ A+ +F+ +
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 270 LKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKV 329
+ ++NA+I GYS + LF R+ G+ ++S V +C+ L G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 330 MHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGD 389
++G I++ + DV + ++ ID+Y KC ++ A VF++M + D V WN +I+ + G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 390 YFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGA 449
++ L ++ M +PD TF S+L AC+ +L G EIH+ I++S + +N V +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 450 LLDMYAKCGAVDEAFKVFNELPERD--------------------LVSWTSMIAAYGSHG 489
L+DMY+KCG ++EA K+ + +R VSW S+I+ Y
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 490 RALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHY 549
++ +A LF M + PD T+ +L C++ G +I + + +++ Y
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVY 639
Query: 550 SC--LIDLLGRAGRLQEAYGILQSTPEIRED 578
C L+D+ + G L ++ + + + +R D
Sbjct: 640 ICSTLVDMYSKCGDLHDSRLMFEKS--LRRD 668
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 182/410 (44%), Gaps = 37/410 (9%)
Query: 204 QPNSVTLTT---VISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEM 260
Q NSV+ T V CA+ L+ GK+ H I GF +++ + L+ +Y
Sbjct: 42 QVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 261 AREVFEQTVLKSVVAWNALIAGYS-------------------------------SRGDS 289
A VF++ L+ VV+WN +I GYS G+S
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 290 KSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSL 349
+++F M EGI+ T + +L CS G +HG ++R DV S+L
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 350 IDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDA 409
+D+Y K R + VF+ + + + V W+ +I+G V AL + +M++V A
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 410 VTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNE 469
+ SVL +C+ L+ L G ++H H ++S + IV A LDMYAKC + +A +F+
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 470 LPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEG 529
+ S+ +MI Y +AL LF + S D I+ + AC+ + EG
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 530 GYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDA 579
+ L I ++ + ID+ G+ L EA+ + R DA
Sbjct: 402 LQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR--RRDA 448
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF-KTIDN 66
T+L TC S GK IH +V+ LQ+++ +C +L+++Y C + + L+F K++
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 67 PLDLSLWNGLMASYTKNYMYITALELFD-MLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
D WN ++ Y + A++LF+ M+L+N +KP+ T+ S+L+AC +G + G
Sbjct: 668 --DFVTWNAMICGYAHHGKGEEAIQLFERMILEN--IKPNHVTFISILRACAHMGLIDKG 723
Query: 126 KMIHTHLIKTGFLLDVVIA--SSTAGMYAKCNSFECAVKMFDEMS-ERDVASWNTVIS-C 181
+ + +++K + LD + S+ + K + A+++ EM E D W T++ C
Sbjct: 724 -LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
Query: 182 YYQDGQAEKALE 193
E A E
Sbjct: 783 TIHRNNVEVAEE 794
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/621 (34%), Positives = 366/621 (58%), Gaps = 6/621 (0%)
Query: 73 WNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHL 132
WN L+ S ++ + L F + ++ KPD++T P LKACG L V G+MIH +
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIHGFV 86
Query: 133 IKTGFL-LDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKA 191
K L D+ + SS MY KC A++MFDE+ + D+ +W++++S + ++G +A
Sbjct: 87 KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 146
Query: 192 LELFKKM-RGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVD 250
+E F++M S P+ VTL T++S+C +L + G+ +H I+ GF +D + ++L++
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 251 MYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTT 310
Y K + A +F+ K V++W+ +IA Y G + + +F M ++G +P + T
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 311 ISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS 370
+ VL +C+ + L+ G+ H IR ++ +V ++++L+D+Y KC A VF ++
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 371 KTDVVYWNVMISGYVTVGDYFKALAIYSDMK-EVGAKPDAVTFTSVLPACSQLAALEKGK 429
+ DVV W +ISG+ G +++ +S M E +PDA+ VL +CS+L LE+ K
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 430 EIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHG 489
H+++I+ ++N + +L+++Y++CG++ A KVFN + +D V WTS+I YG HG
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 490 RALEALKLFGEM-QQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEH 548
+ +AL+ F M + S +P+ +TFL++LSACSHAG + EG F LM+++Y + P EH
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 549 YSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEK 608
Y+ L+DLLGR G L A I + P +L TL ACR+H++ EM E +AK L E
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMP-FSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
Query: 609 DPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKF 668
+ + + Y+++SN+Y +W+ V K+R +K+ G++K S IEI ++ F A+D+
Sbjct: 566 ESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDEL 625
Query: 669 YPQADMVYECLAILAGHMEKD 689
+P+ + VY L L HM++D
Sbjct: 626 HPEKEPVYGLLKELDLHMKED 646
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 302/575 (52%), Gaps = 36/575 (6%)
Query: 10 LRTCTGSKSLKEGKIIH---QKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
L+ C + + G++IH +K VTLG +++ + SLI +Y C A+ +F ++
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEK 124
Query: 67 PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
P D+ W+ +++ + KN A+E F ++ + PD T +++ AC L + +G+
Sbjct: 125 P-DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H +I+ GF D+ + +S YAK +F+ AV +F ++E+DV SW+TVI+CY Q+G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
A +AL +F M G +PN T+ V+ +CA DL++G++ H+ I+ G ++ +S+
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM-NEEGIK 305
ALVDMY KC E A VF + K VV+W ALI+G++ G + ++ F M E +
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P + VL SCS G L+ K H Y+I+ + FI +SL++LY +CG + +A V
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDM-KEVGAKPDAVTFTSVLPACSQLAA 424
F ++ D V W +I+GY G KAL ++ M K KP+ VTF S+L ACS
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483
Query: 425 LEKGKEIHNHII-ESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIA 483
+ +G I ++ + +L N L+D+ + G +D A ++ +P S T I
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP----FSPTPQIL 539
Query: 484 AYGSHGRALEALKLF--GEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYN 541
G L A ++ GEM ++ A+ L S +HAG Y+ LM + Y
Sbjct: 540 -----GTLLGACRIHQNGEMAETVAK----KLFELES--NHAG-------YYMLMSNVYG 581
Query: 542 IQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIR 576
++ E+ L + + + G + G+ +S EIR
Sbjct: 582 VKGEWENVEKLRNSVKQRGIKK---GLAESLIEIR 613
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 267/528 (50%), Gaps = 43/528 (8%)
Query: 154 CNSFECAV---KMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTL 210
C F +V +MF EM++R + WNT++ ++ Q E+ L F M +P++ TL
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTL 63
Query: 211 TTVISSCARLMDLDRGKEIHKEFIKD-GFVSDSYISSALVDMYGKCGCLEMAREVFEQTV 269
+ +C L +++ G+ IH KD SD Y+ S+L+ MY KCG + A +F++
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 270 LKSVVAWNALIAGYSSRGDSKSCVKLFWRM-NEEGIKPTLTTISSVLMSCSRSGQLKHGK 328
+V W+++++G+ G V+ F RM + P T+ +++ +C++ + G+
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 329 VMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVG 388
+HG++IR D+ + +SL++ Y K A N+F+ +++ DV+ W+ +I+ YV G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 389 DYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMG 448
+AL +++DM + G +P+ T VL AC+ LE+G++ H I LET V
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 449 ALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEM-QQSNAR 507
AL+DMY KC + +EA+ VF+ +P +D+VSW ++I+ + +G A +++ F M ++N R
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 508 PDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEA-- 565
PD+I + +L +CS G++++ + + +I +Y + L++L R G L A
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVI-KYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 566 -------------------YGI-------------LQSTPEIREDAGLLSTLFSACRLHR 593
YGI + + E++ + ++ SAC
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 594 DIEMGEKIAKLLIE--KDPDDSSTYIVLSNMYASVKKWDEVRKIRLKM 639
I G +I KL++ + + Y VL ++ V D +I +M
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 194/367 (52%), Gaps = 5/367 (1%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
++TL+ CT + + G+ +H V+ G N+++L SL+N Y + + A+ +FK I
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
D+ W+ ++A Y +N AL +F+ ++ + +P+ T VL+AC + G
Sbjct: 226 EK-DVISWSTVIACYVQNGAAAEALLVFNDMMDDG-TEPNVATVLCVLQACAAAHDLEQG 283
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ H I+ G +V ++++ MY KC S E A +F + +DV SW +IS + +
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 186 GQAEKALELFKKM-RGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYI 244
G A +++E F M + +P+++ + V+ SC+ L L++ K H IK GF S+ +I
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG- 303
++LV++Y +CG L A +VF LK V W +LI GY G ++ F M +
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 463
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSA 362
+KP T S+L +CS +G + G + ++ + ++ ++ + L+DL + G + +A
Sbjct: 464 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Query: 363 ENVFEKM 369
+ ++M
Sbjct: 524 IEITKRM 530
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/668 (32%), Positives = 378/668 (56%), Gaps = 9/668 (1%)
Query: 22 GKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYT 81
G+ +H + + G +++++ SL++ Y N+ VF + ++ W L++ Y
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER-NVVTWTTLISGYA 170
Query: 82 KNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDV 141
+N M L LF M +QN +P+S+T+ + L G G G +HT ++K G +
Sbjct: 171 RNSMNDEVLTLF-MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 142 VIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGS 201
+++S +Y KC + A +FD+ + V +WN++IS Y +G +AL +F MR +
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 202 GFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMA 261
+ + + +VI CA L +L +++H +K GF+ D I +AL+ Y KC + A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 262 REVFEQT-VLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSR 320
+F++ + +VV+W A+I+G+ + V LF M +G++P T S +L +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP- 408
Query: 321 SGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVM 380
+ +H +++ + + ++L+D Y K G+V A VF + D+V W+ M
Sbjct: 409 ---VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 381 ISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQL-AALEKGKEIHNHIIESK 439
++GY G+ A+ ++ ++ + G KP+ TF+S+L C+ A++ +GK+ H I+S+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 440 LETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFG 499
L+++ V ALL MYAK G ++ A +VF E+DLVSW SMI+ Y HG+A++AL +F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 500 EMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRA 559
EM++ + D +TF+ + +AC+HAG V+EG YF++M+ + I P EH SC++DL RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 560 GRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVL 619
G+L++A ++++ P + + T+ +ACR+H+ E+G A+ +I P+DS+ Y++L
Sbjct: 646 GQLEKAMKVIENMPN-PAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 620 SNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECL 679
SNMYA W E K+R M E ++K PG SWIE+ ++ F A D+ +P D +Y L
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Query: 680 AILAGHME 687
L+ ++
Sbjct: 765 EDLSTRLK 772
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 261/478 (54%), Gaps = 13/478 (2%)
Query: 102 LKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAV 161
++ D + SVLK L G+ +H IK GFL DV + +S Y K ++F+
Sbjct: 89 MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 148
Query: 162 KMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLM 221
K+FDEM ER+V +W T+IS Y ++ ++ L LF +M+ G QPNS T + A
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 222 DLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIA 281
RG ++H +K+G +S++L+++Y KCG + AR +F++T +KSVV WN++I+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 282 GYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQG 341
GY++ G + +F+ M ++ + ++ +SV+ C+ +L+ + +H +++
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 342 DVFINSSLIDLYFKCGRVSSAENVFEKMSKT-DVVYWNVMISGYVTVGDYFKALAIYSDM 400
D I ++L+ Y KC + A +F+++ +VV W MISG++ +A+ ++S+M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 401 KEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAV 460
K G +P+ T++ +L A ++ E+H ++++ E + V ALLD Y K G V
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 461 DEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSAC 520
+EA KVF+ + ++D+V+W++M+A Y G A+K+FGE+ + +P+ TF ++L+ C
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 521 SHAGWVDEGGYYFNLMISEYNIQPRNEHYSC----LIDLLGRAGRLQEAYGILQSTPE 574
+ G F+ + I+ R + C L+ + + G ++ A + + E
Sbjct: 505 AATNASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 197/361 (54%), Gaps = 1/361 (0%)
Query: 160 AVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCAR 219
A +FD+ RD S+ +++ + +DG+ ++A LF + G + + ++V+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 220 LMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNAL 279
L D G+++H + IK GF+ D + ++LVD Y K + R+VF++ ++VV W L
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 280 IAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKI 339
I+GY+ + + LF RM EG +P T ++ L + G G +H +++N +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 340 QGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSD 399
+ +++SLI+LY KCG V A +F+K VV WN MISGY G +AL ++
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 400 MKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGA 459
M+ + +F SV+ C+ L L +++H +++ ++ + AL+ Y+KC A
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 460 VDEAFKVFNELP-ERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLS 518
+ +A ++F E+ ++VSWT+MI+ + + EA+ LF EM++ RP+ T+ +L+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 519 A 519
A
Sbjct: 406 A 406
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 218/470 (46%), Gaps = 42/470 (8%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
++++ C K L+ + +H VV G + + +L+ Y C A+ +FK I
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
++ W +++ + +N A++LF ++ ++P+ +TY +L A +
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSE-MKRKGVRPNEFTYSVILTALPVISP----SE 414
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
+H ++KT + + ++ Y K E A K+F + ++D+ +W+ +++ Y Q G+
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARL-MDLDRGKEIHKEFIKDGFVSDSYISS 246
E A+++F ++ G +PN T +++++ CA + +GK+ H IK S +SS
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
AL+ MY K G +E A EVF++ K +V+WN++I+GY+ G + + +F M + +K
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 307 TLTTISSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSAENV 365
T V +C+ +G ++ G+ ++R+ KI NS ++DLY + G++ A V
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
E M + + ++L AC
Sbjct: 655 IENMPNP----------------------------------AGSTIWRTILAACRVHKKT 680
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDL 475
E G+ II K E + + L +MYA+ G E KV + ER++
Sbjct: 681 ELGRLAAEKIIAMKPEDSAAYV-LLSNMYAESGDWQERAKVRKLMNERNV 729
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 139/262 (53%)
Query: 261 AREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSR 320
A +F+++ + ++ +L+ G+S G ++ +LF ++ G++ + SSVL +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 321 SGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVM 380
G+ +H I+ DV + +SL+D Y K VF++M + +VV W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 381 ISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKL 440
ISGY + L ++ M+ G +P++ TF + L ++ +G ++H ++++ L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 441 ETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGE 500
+ V +L+++Y KCG V +A +F++ + +V+W SMI+ Y ++G LEAL +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 501 MQQSNARPDSITFLALLSACSH 522
M+ + R +F +++ C++
Sbjct: 286 MRLNYVRLSESSFASVIKLCAN 307
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 358 RVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLP 417
R+ +A N+F+K D + ++ G+ G +A ++ ++ +G + D F+SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 418 ACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVS 477
+ L G+++H I+ + V +L+D Y K + KVF+E+ ER++V+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 478 WTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMI 537
WT++I+ Y + E L LF MQ +P+S TF A L + G V G + ++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG-VGGRGLQVHTVV 220
Query: 538 SEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQST 572
+ + + LI+L + G +++A + T
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 369/621 (59%), Gaps = 4/621 (0%)
Query: 74 NGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLI 133
N ++ Y + Y L+ F ++++ ++ D T+ +L + S+ +G+ +H +
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 134 KTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALE 193
K G L + +++S MY K F A +FD MSERD+ SWN+VI+ Q+G +A+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 194 LFKKMRGSGFQPNSVTLTTVISSCARLMD-LDRGKEIHKEFIKDGFVSDSYISSALVDMY 252
LF ++ G +P+ T+T+V+ + + L + L K++H IK VSDS++S+AL+D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 253 GKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTIS 312
+ C++ A +FE+ +VAWNA++AGY+ D +KLF M+++G + T++
Sbjct: 463 SRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 313 SVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKT 372
+V +C + GK +H Y I++ D++++S ++D+Y KCG +S+A+ F+ +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 373 DVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIH 432
D V W MISG + G+ +A ++S M+ +G PD T ++ A S L ALE+G++IH
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 433 NHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRAL 492
+ ++ + V +L+DMYAKCG++D+A+ +F + ++ +W +M+ HG
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 701
Query: 493 EALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCL 552
E L+LF +M+ +PD +TF+ +LSACSH+G V E + M +Y I+P EHYSCL
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761
Query: 553 IDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDD 612
D LGRAG +++A +++S + A + TL +ACR+ D E G+++A L+E +P D
Sbjct: 762 ADALGRAGLVKQAENLIESM-SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 613 SSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQA 672
SS Y++LSNMYA+ KWDE++ R MK ++K+PG SWIE+ ++I F +D+ Q
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQT 880
Query: 673 DMVYECLAILAGHMEKDELLP 693
+++Y + + ++++ +P
Sbjct: 881 ELIYRKVKDMIRDIKQEGYVP 901
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 221/421 (52%), Gaps = 5/421 (1%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
+T IL +L T SL G+ +H + LGL + + SLIN+Y + + +A VF
Sbjct: 315 QVTFIL-MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
+ DL WN ++A +N + + A+ LF LL+ LKPD YT SVLKA L
Sbjct: 374 DNMSER-DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPE 431
Query: 122 -VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
+ + K +H H IK + D ++++ Y++ + A +F E D+ +WN +++
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMA 490
Query: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVS 240
Y Q K L+LF M G + + TL TV +C L +++GK++H IK G+
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMN 300
D ++SS ++DMY KCG + A+ F+ + VAW +I+G G+ + +F +M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360
G+ P TI+++ + S L+ G+ +H ++ D F+ +SL+D+Y KCG +
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420
A +F+++ ++ WN M+ G G+ + L ++ MK +G KPD VTF VL ACS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 421 Q 421
Sbjct: 731 H 731
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 257/565 (45%), Gaps = 41/565 (7%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
+L+ C S + + H +GL + + +L+N+Y ++F+ +
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR- 209
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
D+ LWN ++ +Y + A++L + L P+ T + + G G K
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKS- 267
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
+A N D S ++ N +S Y GQ
Sbjct: 268 ----------------------FANGN---------DASSVSEIIFRNKGLSEYLHSGQY 296
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
L+ F M S + + VT ++++ ++ L G+++H +K G +S++L
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
++MY K AR VF+ + +++WN++IAG + G V LF ++ G+KP
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 309 TTISSVLMSCSRSGQ-LKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFE 367
T++SVL + S + L K +H + I+ D F++++LID Y + + AE +FE
Sbjct: 417 YTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE 476
Query: 368 KMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEK 427
+ D+V WN M++GY D K L +++ M + G + D T +V C L A+ +
Sbjct: 477 R-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 428 GKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGS 487
GK++H + I+S + + V +LDMY KCG + A F+ +P D V+WT+MI+
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 488 HGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNE 547
+G A +F +M+ PD T L A S +++G + + + N+
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR---QIHANALKLNCTND 652
Query: 548 HY--SCLIDLLGRAGRLQEAYGILQ 570
+ + L+D+ + G + +AY + +
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFK 677
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 155/608 (25%), Positives = 259/608 (42%), Gaps = 69/608 (11%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
LR S L GK H +++T L +LI++Y C + YA VF + +
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR- 103
Query: 69 DLSLWNGLMASYTKNYMYIT-----ALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVG 123
DL WN ++A+Y ++ + A LF +L Q+ + T +LK C G V
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHSGYVW 162
Query: 124 IGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYY 183
+ H + K G D +A + +Y K + +F+EM RDV WN ++ Y
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 184 QDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
+ G E+A++L SG PN +TL + AR+ D K F
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITLRLL----ARISGDDSDAGQVKSFANGN------ 272
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
+ + + ++ N ++ Y G + +K F M E
Sbjct: 273 ----------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
++ T +L + + L G+ +H ++ + + +++SLI++Y K + A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLA 423
VF+ MS+ D++ WN +I+G G +A+ ++ + G KPD T TSVL A S L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 424 -ALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMI 482
L K++H H I+ ++ V AL+D Y++ + EA +F E DLV+W +M+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMM 489
Query: 483 AAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEG----------GYY 532
A Y + LKLF M + R D T + C +++G GY
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 533 FNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLH 592
+L +S S ++D+ + G + A S P + +D +T+ S C
Sbjct: 550 LDLWVS-----------SGILDMYVKCGDMSAAQFAFDSIP-VPDDVA-WTTMISGC--- 593
Query: 593 RDIEMGEK 600
IE GE+
Sbjct: 594 --IENGEE 599
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+ T+ +TC ++ +GK +H + G ++ + ++++Y C + A F +I
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
P D++ W +++ +N A +F + L PD +T ++ KA L ++ G
Sbjct: 580 VPDDVA-WTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQG 637
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ IH + +K D + +S MYAKC S + A +F + ++ +WN ++ Q
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRG----KEIHKEFIKDGFVSD 241
G+ ++ L+LFK+M+ G +P+ VT V+S+C+ + + +H ++ G +
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY---GIKPE 754
Query: 242 SYISSALVDMYGKCGCLEMAREVFEQTVLK-SVVAWNALIAGYSSRGDSKS 291
S L D G+ G ++ A + E ++ S + L+A +GD+++
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 202 GFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMA 261
GF N++T + DL GK H + + ++ + L+ MY KCG L A
Sbjct: 44 GFLRNAITSS----------DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYA 93
Query: 262 REVFEQTVLKSVVAWNALIAGYSSRGDSKSCVK--------LFWRMNEEGIKPTLTTISS 313
R VF++ + +V+WN+++A Y+ S CV LF + ++ + + T+S
Sbjct: 94 RRVFDKMPDRDLVSWNSILAAYAQ---SSECVVENIQQAFLLFRILRQDVVYTSRMTLSP 150
Query: 314 VLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTD 373
+L C SG + + HGY + + GD F+ +L+++Y K G+V + +FE+M D
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 374 VVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTF 412
VV WN+M+ Y+ +G +A+ + S G P+ +T
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 343/578 (59%), Gaps = 4/578 (0%)
Query: 102 LKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAV 161
+P+++T+P V KAC L VG +M+H HLIK+ F DV + ++T M+ KCNS + A
Sbjct: 48 FEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAA 107
Query: 162 KMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLM 221
K+F+ M ERD +WN ++S + Q G +KA LF++MR + P+SVT+ T+I S +
Sbjct: 108 KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 222 DLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVL--KSVVAWNAL 279
L + +H I+ G +++ + YGKCG L+ A+ VFE ++VV+WN++
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 280 IAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKI 339
YS G++ L+ M E KP L+T ++ SC L G+++H + I
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 340 QGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSD 399
D+ ++ I +Y K SA +F+ M+ V W VMISGY GD +ALA++
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 400 MKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHI-IESKLETNEIVMGALLDMYAKCG 458
M + G KPD VT S++ C + +LE GK I I N ++ AL+DMY+KCG
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 459 AVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLS 518
++ EA +F+ PE+ +V+WT+MIA Y +G LEALKLF +M + +P+ ITFLA+L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 519 ACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIRED 578
AC+H+G +++G YF++M YNI P +HYSC++DLLGR G+L+EA ++++ + D
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA-KPD 526
Query: 579 AGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLK 638
AG+ L +AC++HR++++ E+ A+ L +P ++ Y+ ++N+YA+ WD +IR
Sbjct: 527 AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSI 586
Query: 639 MKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVY 676
MK+ ++K PG S I++ + F + + + +++Y
Sbjct: 587 MKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 250/504 (49%), Gaps = 44/504 (8%)
Query: 23 KIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTK 82
+++H ++ +++ + + ++++ C + DYA VF+ + D + WN +++ + +
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER-DATTWNAMLSGFCQ 130
Query: 83 NYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVV 142
+ A LF + N + PDS T +++++ S+ + + +H I+ G + V
Sbjct: 131 SGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 143 IASSTAGMYAKCNSFECAVKMFD--EMSERDVASWNTVISCYYQDGQAEKALELFKKMRG 200
+A++ Y KC + A +F+ + +R V SWN++ Y G+A A L+ M
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 201 SGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEM 260
F+P+ T + +SC L +G+ IH I G D + + MY K
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 261 AREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSR 320
AR +F+ ++ V+W +I+GY+ +GD + LF M + G KP L T+ S++ C +
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 321 SGQLKHGKVMHGYIIRNKIQG----DVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVY 376
G L+ GK + R I G +V I ++LID+Y KCG + A ++F+ + VV
Sbjct: 370 FGSLETGKWIDA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 377 WNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHII 436
W MI+GY G + +AL ++S M ++ KP+ +TF +VL AC+ +LEKG E + HI+
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIM 485
Query: 437 ESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALK 496
+ +V+N P D ++ M+ G G+ EAL+
Sbjct: 486 K---------------------------QVYNISPGLD--HYSCMVDLLGRKGKLEEALE 516
Query: 497 LFGEMQQSNARPDSITFLALLSAC 520
L M +A+PD+ + ALL+AC
Sbjct: 517 LIRNM---SAKPDAGIWGALLNAC 537
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 197/382 (51%), Gaps = 5/382 (1%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
++TL+++ + KSLK + +H + LG+ + + + I+ Y C + D A LVF+ ID
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 66 N-PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
+ WN + +Y+ A L+ ++L+ + KPD T+ ++ +C ++
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF-KPDLSTFINLAASCQNPETLTQ 274
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
G++IH+H I G D+ ++ MY+K A +FD M+ R SW +IS Y +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY- 243
G ++AL LF M SG +P+ VTL ++IS C + L+ GK I G D+
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
I +AL+DMY KCG + AR++F+ T K+VV W +IAGY+ G +KLF +M +
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 304 IKPTLTTISSVLMSCSRSGQLKHG-KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSA 362
KP T +VL +C+ SG L+ G + H I + S ++DL + G++ A
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 514
Query: 363 ENVFEKMS-KTDVVYWNVMISG 383
+ MS K D W +++
Sbjct: 515 LELIRNMSAKPDAGIWGALLNA 536
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 2/270 (0%)
Query: 262 REVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRS 321
R ++ + L SV AWN I +R D + LF M G +P T V +C+R
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 322 GQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMI 381
+ +++H ++I++ DVF+ ++ +D++ KC V A VFE+M + D WN M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 382 SGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLE 441
SG+ G KA +++ +M+ PD+VT +++ + S +L+ + +H I ++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 442 TNEIVMGALLDMYAKCGAVDEAFKVFNELP--ERDLVSWTSMIAAYGSHGRALEALKLFG 499
V + Y KCG +D A VF + +R +VSW SM AY G A +A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 500 EMQQSNARPDSITFLALLSACSHAGWVDEG 529
M + +PD TF+ L ++C + + +G
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 141/284 (49%), Gaps = 9/284 (3%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
+++ + L +C ++L +G++IH + LG +I + I++Y ++ A L+F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
+ + +S W +++ Y + AL LF ++++ KPD T S++ CG GS
Sbjct: 315 DIMTSRTCVS-WTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGS 372
Query: 122 VGIGKMIHTHLIKTGFLLD-VVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
+ GK I G D V+I ++ MY+KC S A +FD E+ V +W T+I+
Sbjct: 373 LETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKE---IHKEFIKDG 237
Y +G +AL+LF KM ++PN +T V+ +CA L++G E I K+
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 238 FVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVA-WNALI 280
D Y S +VD+ G+ G LE A E+ K W AL+
Sbjct: 493 PGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/685 (32%), Positives = 396/685 (57%), Gaps = 22/685 (3%)
Query: 10 LRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLD 69
L+ C G LK G IH T G + + + +++ +Y +D A+ +F+ + +P D
Sbjct: 85 LKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP-D 141
Query: 70 LSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIH 129
+ WN +++ + N + + F + +++ + D++TY + L C G +G +
Sbjct: 142 VVSWNTILSGFDDNQIALN----FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 130 THLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ-A 188
+ ++KTG D+V+ +S MY++ SF A ++FDEMS +D+ SWN+++S Q+G
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
+A+ +F+ M G + + V+ T+VI++C DL ++IH IK G+ S + + L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
+ Y KCG LE + VF Q ++VV+W +I+ S++ D+ V +F M +G+ P
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--SNKDDA---VSIFLNMRFDGVYPNE 372
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEK 368
T ++ + + Q+K G +HG I+ + + +S I LY K + A+ FE
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 369 MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS--QLAALE 426
++ +++ WN MISG+ G +AL ++ P+ TF SVL A + + +++
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVK 491
Query: 427 KGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYG 486
+G+ H H+++ L + +V ALLDMYAK G +DE+ KVFNE+ +++ WTS+I+AY
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 487 SHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRN 546
SHG + LF +M + N PD +TFL++L+AC+ G VD+G FN+MI YN++P +
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 547 EHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLI 606
EHYSC++D+LGRAGRL+EA ++ P ++ +L ++ +CRLH +++MG K+A+L +
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGES-MLQSMLGSCRLHGNVKMGAKVAELAM 670
Query: 607 EKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGD-----RIQP 661
E P+ S +Y+ + N+YA ++WD+ +IR M++ + K G SWI++GD +Q
Sbjct: 671 EMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQG 730
Query: 662 FFAEDKFYPQADMVYECLAILAGHM 686
F + DK +P++D +Y + I+ M
Sbjct: 731 FSSGDKSHPKSDEIYRMVEIIGLEM 755
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/690 (33%), Positives = 377/690 (54%), Gaps = 17/690 (2%)
Query: 8 TLLRTCT---GSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTI 64
TLL+ T ++L G+ +H +++ G I L+N Y C A +F I
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 65 DNPLDLSLWNGLMASYTKN---YMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
D+ WN L+ Y++N T ++LF + L P++YT + KA L S
Sbjct: 76 ICK-DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKAESSLQS 133
Query: 122 VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISC 181
+G+ H ++K D+ + +S GMY K E +K+F M ER+ +W+T++S
Sbjct: 134 STVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSG 193
Query: 182 YYQDGQAEKALELF-----KKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKD 236
Y G+ E+A+++F +K GS + T V+SS A + + G++IH IK+
Sbjct: 194 YATRGRVEEAIKVFNLFLREKEEGS---DSDYVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 237 GFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLF 296
G + +S+ALV MY KC L A ++F+ + ++ + W+A++ GYS G+S VKLF
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310
Query: 297 WRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKC 356
RM GIKP+ TI VL +CS L+ GK +H ++++ + +F ++L+D+Y K
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 357 GRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVL 416
G ++ A F+ + + DV W +ISGYV D +AL +Y MK G P+ T SVL
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430
Query: 417 PACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLV 476
ACS LA LE GK++H H I+ + AL MY+KCG++++ VF P +D+V
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 477 SWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLM 536
SW +MI+ +G+ EAL+LF EM PD +TF+ ++SACSH G+V+ G +YFN+M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 537 ISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIE 596
+ + P+ +HY+C++DLL RAG+L+EA ++S I L L SAC+ H E
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIES-ANIDHGLCLWRILLSACKNHGKCE 609
Query: 597 MGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIG 656
+G + L+ +SSTY+ LS +Y ++ + +V ++ M+ G+ K GCSWIE+
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELK 669
Query: 657 DRIQPFFAEDKFYPQADMVYECLAILAGHM 686
++ F D +P + + + +++ M
Sbjct: 670 NQYHVFVVGDTMHPMIEETKDLVCLVSRQM 699
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 213/409 (52%), Gaps = 14/409 (3%)
Query: 198 MRGSGFQ----PNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYG 253
M S FQ P++ TL ++ ++ +L G+ +H + I+ G + ++ LV+ Y
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 254 KCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRG---DSKSCVKLFWRMNEEGIKPTLTT 310
KCG L A +F + K VV+WN+LI GYS G S + ++LF M + I P T
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 311 ISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS 370
++ + + S G+ H +++ GD+++++SL+ +Y K G V VF M
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 371 KTDVVYWNVMISGYVTVGDYFKALAIYS---DMKEVGAKPDAVTFTSVLPACSQLAALEK 427
+ + W+ M+SGY T G +A+ +++ KE G+ D V FT+VL + + +
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGL 239
Query: 428 GKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGS 487
G++IH I++ L + AL+ MY+KC +++EA K+F+ +R+ ++W++M+ Y
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 488 HGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNE 547
+G +LEA+KLF M + +P T + +L+ACS +++EG + ++ + +
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KLGFERHLF 358
Query: 548 HYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIE 596
+ L+D+ +AG L +A E D L ++L S + D E
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQE--RDVALWTSLISGYVQNSDNE 405
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 371/654 (56%), Gaps = 10/654 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
+LL ++S+ + K +H V+T G + L +L Y C + YA +F+ +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMPQS 78
Query: 68 LDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
LS +N ++ Y + +Y A+ +F M+ + PD YTYP V KA G L S+ +G
Sbjct: 79 SLLS-YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
++H ++++ F D + ++ MY E A +FD M RDV SWNT+IS YY++G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY-IS 245
AL +F M + T+ +++ C L DL+ G+ +HK +++ + D +
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVK 256
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
+ALV+MY KCG ++ AR VF++ + V+ W +I GY+ GD ++ ++L M EG++
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P TI+S++ C + ++ GK +HG+ +R ++ D+ I +SLI +Y KC RV V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
F SK W+ +I+G V AL ++ M+ +P+ T S+LPA + LA L
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPER----DLVSWTSM 481
+ IH ++ ++ ++ L+ +Y+KCG ++ A K+FN + E+ D+V W ++
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 482 IAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYN 541
I+ YG HG AL++F EM +S P+ ITF + L+ACSH+G V+EG F M+ Y
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYK 556
Query: 542 IQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKI 601
R+ HY+C++DLLGRAGRL EAY ++ + P + + L +AC H ++++GE
Sbjct: 557 TLARSNHYTCIVDLLGRAGRLDEAYNLITTIP-FEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 602 AKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEI 655
A L E +P+++ Y++L+N+YA++ +W ++ K+R M+ +GLRK PG S IEI
Sbjct: 616 ANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 240/491 (48%), Gaps = 8/491 (1%)
Query: 109 YPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMS 168
Y S+L S+ K +H H+I TG + I S+ + YA C A K+F+EM
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 169 ERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQ--PNSVTLTTVISSCARLMDLDRG 226
+ + S+N VI Y ++G A+ +F +M G + P+ T V + L + G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 227 KEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSR 286
+H ++ F D Y+ +AL+ MY G +EMAR+VF+ + V++WN +I+GY
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 287 GDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFIN 346
G + +F M E + TI S+L C L+ G+ +H + ++ + +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 347 SSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAK 406
++L+++Y KCGR+ A VF++M + DV+ W MI+GY GD AL + M+ G +
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 407 PDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKV 466
P+AVT S++ C + GK +H + ++ ++ I+ +L+ MYAKC VD F+V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 467 FNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWV 526
F+ + W+++IA + +AL LF M++ + P+ T +LL A +A
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALA 434
Query: 527 D-EGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIR--EDAGLLS 583
D + +++ + + L+ + + G L+ A+ I E +D L
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 584 TLFSACRLHRD 594
L S +H D
Sbjct: 495 ALISGYGMHGD 505
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/628 (33%), Positives = 366/628 (58%), Gaps = 8/628 (1%)
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
N D LWN ++ +T +YI A++ + ++ +K D++TYP V+K+ G+ S+ G
Sbjct: 91 NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG-VKADTFTYPFVIKSVAGISSLEEG 149
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
K IH +IK GF+ DV + +S +Y K A K+F+EM ERD+ SWN++IS Y
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF-VSDSYI 244
G +L LFK+M GF+P+ + + + +C+ + GKEIH ++ D +
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEE-G 303
++++DMY K G + A +F + +++VAWN +I Y+ G F +M+E+ G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
++P + T ++L + + + G+ +HGY +R + + ++LID+Y +CG++ SAE
Sbjct: 330 LQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLA 423
+F++M++ +V+ WN +I+ YV G + AL ++ ++ + PD+ T S+LPA ++
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 424 ALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIA 483
+L +G+EIH +I++S+ +N I++ +L+ MYA CG +++A K FN + +D+VSW S+I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 484 AYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQ 543
AY HG ++ LF EM S P+ TF +LL+ACS +G VDEG YF M EY I
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID 565
Query: 544 PRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAK 603
P EHY C++DL+GR G A L+ P + A + +L +A R H+DI + E A+
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV-PTARIWGSLLNASRNHKDITIAEFAAE 624
Query: 604 LLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFF 663
+ + + D++ Y++L NMYA +W++V +I+L M+ G+ + S +E + F
Sbjct: 625 QIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFT 684
Query: 664 AEDKFYPQADMVYECLAILAGHMEKDEL 691
D+ + + +YE L +++ + ++++
Sbjct: 685 NGDRSHVATNKIYEVLDVVSRMVGEEDI 712
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 223/381 (58%), Gaps = 6/381 (1%)
Query: 151 YAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTL 210
+A E A+++FDEM++ D WN +I + G +A++ + +M +G + ++ T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 211 TTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVL 270
VI S A + L+ GK+IH IK GFVSD Y+ ++L+ +Y K GC A +VFE+
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 271 KSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVM 330
+ +V+WN++I+GY + GD S + LF M + G KP + S L +CS K GK +
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 331 HGYIIRNKIQ-GDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGD 389
H + +R++I+ GDV + +S++D+Y K G VS AE +F M + ++V WNVMI Y G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 390 YFKALAIYSDMKEV-GAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMG 448
A + M E G +PD +T ++LPA +A+ +G+ IH + + + ++
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLET 369
Query: 449 ALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARP 508
AL+DMY +CG + A +F+ + E++++SW S+IAAY +G+ AL+LF E+ S+ P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 509 DSITFLALLSACSHAGWVDEG 529
DS T ++L A + + + EG
Sbjct: 430 DSTTIASILPAYAESLSLSEG 450
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 258/484 (53%), Gaps = 10/484 (2%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
++++ G SL+EGK IH V+ LG +++ +C SLI+LY A VF+ +
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER- 194
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
D+ WN +++ Y ++L LF +L+ + KPD ++ S L AC + S +GK I
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF-KPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 129 HTHLIKTGFLL-DVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
H H +++ DV++ +S MY+K A ++F+ M +R++ +WN +I CY ++G+
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 188 AEKALELFKKM-RGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
A F+KM +G QP+ +T ++ + A L G+ IH ++ GF+ + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLET 369
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
AL+DMYG+CG L+ A +F++ K+V++WN++IA Y G + S ++LF + + + P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 307 TLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVF 366
TTI+S+L + + S L G+ +H YI++++ + I +SL+ +Y CG + A F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALE 426
+ DVV WN +I Y G ++ ++S+M P+ TF S+L ACS ++
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 427 KGKEIHNHI-IESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVS-WTSMIAA 484
+G E + E ++ G +LD+ + G A + E+P W S++ A
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA 609
Query: 485 YGSH 488
+H
Sbjct: 610 SRNH 613
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 192/363 (52%), Gaps = 15/363 (4%)
Query: 214 ISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSV 273
IS ARL+ DR K + V+D ++ AL + +E A ++F++
Sbjct: 44 ISKPARLVLRDRYKVTKQ-------VNDPALTRALRG-FADSRLMEDALQLFDEMNKADA 95
Query: 274 VAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGY 333
WN +I G++S G V+ + RM G+K T V+ S + L+ GK +H
Sbjct: 96 FLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAM 155
Query: 334 IIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKA 393
+I+ DV++ +SLI LY K G AE VFE+M + D+V WN MISGY+ +GD F +
Sbjct: 156 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 394 LAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEI-VMGALLD 452
L ++ +M + G KPD + S L ACS + + + GKEIH H + S++ET ++ VM ++LD
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 453 MYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNA-RPDSI 511
MY+K G V A ++FN + +R++V+W MI Y +GR +A F +M + N +PD I
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 512 TFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQS 571
T + LL A + + EG + P + LID+ G G+L+ A I
Sbjct: 336 TSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 572 TPE 574
E
Sbjct: 391 MAE 393
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 4 TRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKT 63
T I ++L S SL EG+ IH +V +N + SL+++Y C + + A F
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 64 IDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVG 123
I D+ WN ++ +Y + ++ LF ++ + + P+ T+ S+L AC G V
Sbjct: 492 ILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-VNPNKSTFASLLAACSISGMVD 549
Query: 124 IG 125
G
Sbjct: 550 EG 551
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 345/575 (60%), Gaps = 9/575 (1%)
Query: 111 SVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSER 170
S+L+ C G G +H +L+K+G L+++ ++ MY KC A K+FD M ER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 171 DVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIH 230
+V SW+ ++S + +G + +L LF +M G PN T +T + +C L L++G +IH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 231 KEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSK 290
+K GF + ++LVDMY KCG + A +VF + V +S+++WNA+IAG+ G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 291 SCVKLFWRMNEEGIK--PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQ--GDVFIN 346
+ F M E IK P T++S+L +CS +G + GK +HG+++R+ I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 347 SSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAK 406
SL+DLY KCG + SA F+++ + ++ W+ +I GY G++ +A+ ++ ++E+ ++
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 407 PDAVTFTSVLPACSQLAALEKGKEIHNHIIE--SKLETNEIVMGALLDMYAKCGAVDEAF 464
D+ +S++ + A L +GK++ ++ S LET+ V+ +++DMY KCG VDEA
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVDEAE 368
Query: 465 KVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAG 524
K F E+ +D++SWT +I YG HG +++++F EM + N PD + +LA+LSACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 525 WVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLST 584
+ EG F+ ++ + I+PR EHY+C++DLLGRAGRL+EA ++ + P I+ + G+ T
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP-IKPNVGIWQT 487
Query: 585 LFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGL 644
L S CR+H DIE+G+++ K+L+ D + + Y+++SN+Y W+E R GL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 645 RKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECL 679
+K G SW+EI + F + + +P ++ E L
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 582
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 278/532 (52%), Gaps = 11/532 (2%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
++++LR CT +G +H ++ G N+ LI++Y C+ A VF ++
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
+S W+ LM+ + N +L LF +M Q Y P+ +T+ + LKACG L ++
Sbjct: 69 ERNVVS-WSALMSGHVLNGDLKGSLSLFSEMGRQGIY--PNEFTFSTNLKACGLLNALEK 125
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
G IH +K GF + V + +S MY+KC A K+F + +R + SWN +I+ +
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 185 DGQAEKALELFKKMRGSGF--QPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF--VS 240
G KAL+ F M+ + +P+ TLT+++ +C+ + GK+IH ++ GF S
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMN 300
+ I+ +LVD+Y KCG L AR+ F+Q K++++W++LI GY+ G+ + LF R+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360
E + +SS++ + L+ GK M ++ + + +S++D+Y KCG V
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420
AE F +M DV+ W V+I+GY G K++ I+ +M +PD V + +VL ACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 421 QLAALEKGKEIHNHIIESK-LETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVS-W 478
+++G+E+ + ++E+ ++ ++D+ + G + EA + + +P + V W
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 479 TSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGG 530
++++ HG +E K G++ + ++ + + AG+ +E G
Sbjct: 486 QTLLSLCRVHG-DIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/691 (32%), Positives = 383/691 (55%), Gaps = 6/691 (0%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
+ ++ LL+ C + ++ G +H +V LG + + +L+++Y + A +
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGL 119
F D LWN +++SY+ + + LELF +M + P P+SYT S L AC G
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP--APNSYTIVSALTACDGF 297
Query: 120 GSVGIGKMIHTHLIKTG-FLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTV 178
+GK IH ++K+ ++ + ++ MY +C A ++ +M+ DV +WN++
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 179 ISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF 238
I Y Q+ ++ALE F M +G + + V++T++I++ RL +L G E+H IK G+
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 239 VSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWR 298
S+ + + L+DMY KC F + K +++W +IAGY+ ++LF
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 299 MNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGR 358
+ ++ ++ + S+L + S + K +H +I+R + D I + L+D+Y KC
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRN 536
Query: 359 VSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPA 418
+ A VFE + DVV W MIS G+ +A+ ++ M E G D+V +L A
Sbjct: 537 MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 419 CSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSW 478
+ L+AL KG+EIH +++ + A++DMYA CG + A VF+ + + L+ +
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 479 TSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMIS 538
TSMI AYG HG A++LF +M+ N PD I+FLALL ACSHAG +DEG + +M
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 716
Query: 539 EYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMG 598
EY ++P EHY CL+D+LGRA + EA+ ++ + A + L +ACR H + E+G
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM-KTEPTAEVWCALLAACRSHSEKEIG 775
Query: 599 EKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDR 658
E A+ L+E +P + +++SN++A +W++V K+R KMK G+ K+PGCSWIE+ +
Sbjct: 776 EIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGK 835
Query: 659 IQPFFAEDKFYPQADMVYECLAILAGHMEKD 689
+ F A DK +P++ +YE L+ + +E++
Sbjct: 836 VHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 238/443 (53%), Gaps = 12/443 (2%)
Query: 90 LELFDMLLQNPYLKPDSY-------TYPSVLKACGGLGSVGIGKMIHTHLIKT--GFLLD 140
L FD +L + + D + VL+ CG +V G+ +H+ + KT F LD
Sbjct: 57 LACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD 116
Query: 141 VVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRG 200
+A MY KC S + A K+FDEM +R +WNT+I Y +G+ AL L+ MR
Sbjct: 117 F-LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 201 SGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEM 260
G + ++ +CA+L D+ G E+H +K G+ S +I +ALV MY K L
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 261 AREVFEQTVLKS-VVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCS 319
AR +F+ K V WN++++ YS+ G S ++LF M+ G P TI S L +C
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 320 RSGQLKHGKVMHGYIIRNKIQ-GDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWN 378
K GK +H ++++ ++++ ++LI +Y +CG++ AE + +M+ DVV WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 379 VMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIES 438
+I GYV Y +AL +SDM G K D V+ TS++ A +L+ L G E+H ++I+
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 439 KLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLF 498
++N V L+DMY+KC + F + ++DL+SWT++IA Y + +EAL+LF
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 499 GEMQQSNARPDSITFLALLSACS 521
++ + D + ++L A S
Sbjct: 476 RDVAKKRMEIDEMILGSILRASS 498
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 411 TFTSVLPACSQLAALEKGKEIHNHIIESKLETN-EIVMGALLDMYAKCGAVDEAFKVFNE 469
F VL C + A+ +G+++H+ I ++ + + G L+ MY KCG++D+A KVF+E
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 470 LPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEG 529
+P+R +W +MI AY S+G AL L+ M+ +F ALL AC+ + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 530 GYYFNLMI 537
+L++
Sbjct: 202 SELHSLLV 209
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/706 (33%), Positives = 386/706 (54%), Gaps = 28/706 (3%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQN------YDYAMLVF 61
+ L+ C +K+LK GK +H ++ ++ + SL+N+Y SC N YD VF
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
+ ++ WN L++ Y K A F ++++ +KP ++ +V A S
Sbjct: 172 DNMRRK-NVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKPSPVSFVNVFPAVSISRS 229
Query: 122 VGIGKMIHTHLIKTG--FLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVI 179
+ + + ++K G ++ D+ + SS MYA+ E + ++FD ER++ WNT+I
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 180 SCYYQDGQAEKALELFKKMRGSG-FQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF 238
Y Q+ +++ELF + GS + VT S+ + L ++ G++ H GF
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH------GF 343
Query: 239 VSDSY------ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSC 292
VS ++ I ++L+ MY +CG + + VF + VV+WN +I+ + G
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 293 VKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDL 352
+ L + M ++G K T++++L + S + GK H ++IR IQ + +NS LID+
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDM 462
Query: 353 YFKCGRVSSAENVFEK--MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAV 410
Y K G + ++ +FE ++ D WN MISGY G K ++ M E +P+AV
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 411 TFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNEL 470
T S+LPACSQ+ +++ GK++H I L+ N V AL+DMY+K GA+ A +F++
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 471 PERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGG 530
ER+ V++T+MI YG HG A+ LF MQ+S +PD+ITF+A+LSACS++G +DEG
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 531 YYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACR 590
F M YNIQP +EHY C+ D+LGR GR+ EAY ++ E A L +L +C+
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCK 702
Query: 591 LHRDIEMGEKIAKLL--IEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNP 648
LH ++E+ E +++ L +K + S ++LSNMYA +KW V K+R M+E GL+K
Sbjct: 703 LHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEV 762
Query: 649 GCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKDELLPS 694
G S IEI + F + D+ +P + +Y+ + LA M D L +
Sbjct: 763 GRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTT 808
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 299/612 (48%), Gaps = 30/612 (4%)
Query: 51 CQ--NYDYAMLVFKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQN-PYLKPDSY 107
CQ N A +F I P + LWN ++ + N + AL + + + P+ D+Y
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTV-LWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAY 108
Query: 108 TYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKC-NSFEC-----AV 161
TY S LKAC ++ GK +H HLI+ V+ +S MY C N+ +C
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 162 KMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLM 221
K+FD M ++V +WNT+IS Y + G+ +A F M +P+ V+ V + +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 222 DLDRGKEIHKEFIK--DGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNAL 279
+ + + +K D +V D ++ S+ + MY + G +E +R VF+ V +++ WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 280 IAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKH---GKVMHGYIIR 336
I Y ++LF + G K ++ + L++ S L+ G+ HG++ +
Sbjct: 289 IGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 337 NKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAI 396
N + + I +SL+ +Y +CG V + VF M + DVV WN MIS +V G + L +
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 397 YSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAK 456
+M++ G K D +T T++L A S L E GK+ H +I ++ E + L+DMY+K
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-EGMNSYLIDMYSK 465
Query: 457 CGAVDEAFKVF--NELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFL 514
G + + K+F + ERD +W SMI+ Y +G + +F +M + N RP+++T
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVA 525
Query: 515 ALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPE 574
++L ACS G VD G I +Y + S L+D+ +AG ++ A + T E
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 575 IREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPD----DSSTYIVLSNMYASVKKWD 630
++ +T+ H MGE+ L + D+ T++ + + + D
Sbjct: 585 --RNSVTYTTMILGYGQH---GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 631 EVRKIRLKMKEL 642
E KI +M+E+
Sbjct: 640 EGLKIFEEMREV 651
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 359/648 (55%), Gaps = 10/648 (1%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
LL CT SL++ H + GL +I++ L++LY A LVF I P
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP- 105
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
D LW ++ Y N + ++L+D+L+++ + + D + LKAC L + GK I
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGF-RYDDIVFSKALKACTELQDLDNGKKI 164
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
H L+K D V+ + MYAKC + A K+F++++ R+V W ++I+ Y ++
Sbjct: 165 HCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
E+ L LF +MR + N T T+I +C +L L +GK H +K G S + ++L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
+DMY KCG + AR VF + +V W A+I GY+ G + LF +M IKP
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEK 368
TI+SVL C L+ G+ +HG I+ I D + ++L+ +Y KC + A+ VFE
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 369 MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKG 428
S+ D+V WN +ISG+ G +AL ++ M P+ VT S+ AC+ L +L G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 429 KEIHNHIIE-SKLETNEIVMG-ALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYG 486
+H + ++ L ++ + +G ALLD YAKCG A +F+ + E++ ++W++MI YG
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 487 SHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRN 546
G + +L+LF EM + +P+ TF ++LSAC H G V+EG YF+ M +YN P
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 547 EHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLI 606
+HY+C++D+L RAG L++A I++ P I+ D C +H ++GE + K ++
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMP-IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 607 EKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIE 654
+ PDD+S Y+++SN+YAS +W++ +++R MK+ GL K G S +E
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 204/380 (53%), Gaps = 7/380 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
TL+ CT +L +GK H +V G++ + L SL+++Y C + A VF +
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE-HSH 305
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+DL +W ++ YT N AL LF ++ +KP+ T SVL CG + ++ +G+
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQK-MKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
+H IK G + D +A++ MYAKC A +F+ SE+D+ +WN++IS + Q+G
Sbjct: 365 VHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDS--YIS 245
+AL LF +M PN VT+ ++ S+CA L L G +H +K GF++ S ++
Sbjct: 424 IHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVG 483
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
+AL+D Y KCG + AR +F+ K+ + W+A+I GY +GD+ ++LF M ++ K
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK 543
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSAEN 364
P +T +S+L +C +G + GK + ++ + ++D+ + G + A +
Sbjct: 544 PNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALD 603
Query: 365 VFEKMS-KTDVVYWNVMISG 383
+ EKM + DV + + G
Sbjct: 604 IIEKMPIQPDVRCFGAFLHG 623
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 379/650 (58%), Gaps = 14/650 (2%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
++L C + L+ GK++ +V+ G ++ + +C ++++LY C + AM VF I NP
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+S W +++ YTK+ +ALE+F + ++ ++ ++ T SV+ ACG V
Sbjct: 315 SVVS-WTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMF---DEMSERDVASWNTVISCYYQ 184
+H + K+GF LD +A++ MY+K + + ++F D++ +++ N +I+ + Q
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQ 430
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMD-LDRGKEIHKEFIKDGFVSDSY 243
+ KA+ LF +M G + + ++ +++S ++D L+ GK++H +K G V D
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS----VLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
+ S+L +Y KCG LE + ++F+ K W ++I+G++ G + + LF M ++G
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
P +T+++VL CS L GK +HGY +R I + + S+L+++Y KCG + A
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLA 423
V++++ + D V + +ISGY G ++ DM G D+ +S+L A +
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 424 ALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIA 483
G ++H +I + L T V +LL MY+K G++D+ K F+++ DL++WT++IA
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 484 AYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQ 543
+Y HG+A EAL+++ M++ +PD +TF+ +LSACSH G V+E ++ N M+ +Y I+
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 544 PRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAK 603
P N HY C++D LGR+GRL+EA + + I+ DA + TL +AC++H ++E+G+ AK
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNM-HIKPDALVWGTLLAACKIHGEVELGKVAAK 845
Query: 604 LLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWI 653
IE +P D+ YI LSN+ A V +WDEV + R MK G++K PG S +
Sbjct: 846 KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 292/569 (51%), Gaps = 16/569 (2%)
Query: 34 LQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTKNYMYITALELF 93
L ++ L KSL++ Y + + A +F TI P D+ N +++ Y ++ ++ +L F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQP-DVVSCNIMISGYKQHRLFEESLRFF 138
Query: 94 DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAK 153
+ + + +Y SV+ AC L + +++ H IK G+ V+ S+ +++K
Sbjct: 139 SKM-HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 154 CNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQ-PNSVTLTT 212
FE A K+F + +V WNT+I+ ++ +LF +M GFQ P+S T ++
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPDSYTYSS 256
Query: 213 VISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKS 272
V+++CA L L GK + IK G D ++ +A+VD+Y KCG + A EVF + S
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 273 VVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHG 332
VV+W +++GY+ D+ S +++F M G++ T++SV+ +C R + +H
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 333 YIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKM---SKTDVVYWNVMISGYVTVGD 389
++ ++ D + ++LI +Y K G + +E VFE + + ++V NVMI+ +
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKK 433
Query: 390 YFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGA 449
KA+ +++ M + G + D + S+L S L L GK++H + ++S L + V +
Sbjct: 434 PGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 450 LLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPD 509
L +Y+KCG+++E++K+F +P +D W SMI+ + +G EA+ LF EM PD
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD 550
Query: 510 SITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGIL 569
T A+L+ CS + G + I + S L+++ + G L+ A +
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 570 QSTPEIREDAGLLSTLFSACRLHRDIEMG 598
PE+ D S+L S H I+ G
Sbjct: 610 DRLPEL--DPVSCSSLISGYSQHGLIQDG 636
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 260/529 (49%), Gaps = 37/529 (6%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
+N + +++ C + E +H V G + ++ +LI++Y + D + V
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F+ +D+ ++ N ++ S++++ A+ LF +LQ L+ D ++ S+L L
Sbjct: 409 FEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSV---LD 464
Query: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
+ +GK +H + +K+G +LD+ + SS +Y+KC S E + K+F + +D A W ++IS
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVS 240
+ + G +A+ LF +M G P+ TL V++ C+ L RGKEIH ++ G
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMN 300
+ SALV+MY KCG L++AR+V+++ V+ ++LI+GYS G + LF M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360
G ISS+L + + S + G +H YI + + + + SSL+ +Y K G +
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420
F +++ D++ W +I+ Y G +AL +Y+ MKE G KPD VTF VL ACS
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480
+E ES N +V K + PE +
Sbjct: 765 HGGLVE----------ESYFHLNSMV------------------KDYGIEPENR--HYVC 794
Query: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEG 529
M+ A G GR EA M + +PD++ + LL+AC G V+ G
Sbjct: 795 MVDALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVELG 840
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 9/261 (3%)
Query: 317 SCSRSGQLKHGKVMHGYIIRNKI-QGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVV 375
S SR L+ K++ +++R + DVF+ SL+ Y G ++ A +F+ + + DVV
Sbjct: 57 SNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV 116
Query: 376 YWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHI 435
N+MISGY + ++L +S M +G + + +++ SV+ ACS L A + + H
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 436 IESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEAL 495
I+ E+V AL+D+++K ++A+KVF + ++ W ++IA +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 496 KLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHY---SCL 552
LF EM +PDS T+ ++L+AC+ + F ++ I+ E + +
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLR-----FGKVVQARVIKCGAEDVFVCTAI 291
Query: 553 IDLLGRAGRLQEAYGILQSTP 573
+DL + G + EA + P
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIP 312
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/700 (32%), Positives = 388/700 (55%), Gaps = 45/700 (6%)
Query: 10 LRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQ-----NYDYAMLVFKTI 64
L+ C K++ E K+ H+ + GL N+++ L+ SC+ + +A VF+
Sbjct: 39 LKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVAR--SCELGTRESLSFAKEVFENS 93
Query: 65 DNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
++ ++N L+ Y + + A+ LF + + N + PD YT+P L AC + G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLF-LRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
G IH ++K G+ D+ + +S YA+C + A K+FDEMSER+V SW ++I Y +
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 185 DGQAEKALELFKKM-RGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
A+ A++LF +M R PNSVT+ VIS+CA+L DL+ G++++ G +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
+ SALVDMY KC +++A+ +F++ ++ NA+ + Y +G ++ + +F M + G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAE 363
++P ++ S + SCS+ + GK HGY++RN + I ++LID+Y KC R +A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 364 NVFEKMSKTDVVYWNVMISGYVTVGD-------------------------------YFK 392
+F++MS VV WN +++GYV G+ + +
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 393 ALAIYSDMK-EVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALL 451
A+ ++ M+ + G D VT S+ AC L AL+ K I+ +I ++ ++ + + L+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 452 DMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSI 511
DM+++CG + A +FN L RD+ +WT+ I A G A A++LF +M + +PD +
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 512 TFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQS 571
F+ L+ACSH G V +G F M+ + + P + HY C++DLLGRAG L+EA +++
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 572 TPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDE 631
P D + ++L +ACR+ ++EM A+ + P+ + +Y++LSN+YAS +W++
Sbjct: 633 MPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 632 VRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQ 671
+ K+RL MKE GLRK PG S I+I + F + D+ +P+
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 153/316 (48%), Gaps = 34/316 (10%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+L+ + +C+ +++ GK H V+ G ++ +C +LI++Y C D A +F +
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 66 NPLDLSLWNGLMASYTKN-------------------------------YMYITALELFD 94
N ++ WN ++A Y +N ++ A+E+F
Sbjct: 400 NKTVVT-WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 95 MLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKC 154
+ + D T S+ ACG LG++ + K I+ ++ K G LDV + ++ M+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 155 NSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVI 214
E A+ +F+ ++ RDV++W I G AE+A+ELF M G +P+ V +
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 215 SSCARLMDLDRGKEIHKEFIK-DGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLK-S 272
++C+ + +GKEI +K G + +VD+ G+ G LE A ++ E ++ +
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 273 VVAWNALIAGYSSRGD 288
V WN+L+A +G+
Sbjct: 639 DVIWNSLLAACRVQGN 654
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 326/601 (54%), Gaps = 38/601 (6%)
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
K +H I+T L AS +Y A+ +F + V +W +VI C+
Sbjct: 24 AKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYI 244
KAL F +MR SG P+ +V+ SC +MDL G+ +H ++ G D Y
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 245 SSALVDMYGKC-------------------------------GCL-----EMAREVFEQT 268
+AL++MY K C+ + R VFE
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 269 VLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGK 328
K VV++N +IAGY+ G + +++ M +KP T+SSVL S + GK
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 329 VMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVG 388
+HGY+IR I DV+I SSL+D+Y K R+ +E VF ++ D + WN +++GYV G
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 389 DYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMG 448
Y +AL ++ M KP AV F+SV+PAC+ LA L GK++H +++ +N +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 449 ALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARP 508
AL+DMY+KCG + A K+F+ + D VSWT++I + HG EA+ LF EM++ +P
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 509 DSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGI 568
+ + F+A+L+ACSH G VDE YFN M Y + EHY+ + DLLGRAG+L+EAY
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 569 LQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKK 628
+ S + + STL S+C +H+++E+ EK+A+ + D ++ Y+++ NMYAS +
Sbjct: 503 I-SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGR 561
Query: 629 WDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEK 688
W E+ K+RL+M++ GLRK P CSWIE+ ++ F + D+ +P D + E L + MEK
Sbjct: 562 WKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Query: 689 D 689
+
Sbjct: 622 E 622
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 269/522 (51%), Gaps = 43/522 (8%)
Query: 6 ILTLLRTCTGSKSLKEGKIIH-QKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTI 64
I TL++ T KS + K +H Q + T L + A +I++Y + + A+L+FKT+
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA--SIVISIYTNLKLLHEALLLFKTL 65
Query: 65 DNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
+P L+ W ++ +T ++ AL F + ++ PD +PSVLK+C + +
Sbjct: 66 KSPPVLA-WKSVIRCFTDQSLFSKALASF-VEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAV---KMFDEMSER----------- 170
G+ +H +++ G D+ ++ MYAK + +FDEM +R
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 171 ----------------------DVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSV 208
DV S+NT+I+ Y Q G E AL + ++M + +P+S
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 209 TLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQT 268
TL++V+ + +D+ +GKEIH I+ G SD YI S+LVDMY K +E + VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 269 VLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGK 328
+ ++WN+L+AGY G ++LF +M +KP SSV+ +C+ L GK
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 329 VMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVG 388
+HGY++R ++FI S+L+D+Y KCG + +A +F++M+ D V W +I G+ G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 389 DYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVM- 447
+A++++ +MK G KP+ V F +VL ACS + +++ N + + E+
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 448 GALLDMYAKCGAVDEAFKVFNEL-PERDLVSWTSMIAAYGSH 488
A+ D+ + G ++EA+ +++ E W++++++ H
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 272/617 (44%), Gaps = 115/617 (18%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLY---------FSCQNY---- 54
++L++CT L+ G+ +H +V LG+ ++ +L+N+Y S N
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 55 -----------------------DYAMLVFKTIDNPLDLSLWNGLMASYTKNYMYITALE 91
D VF+ + D+ +N ++A Y ++ MY AL
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK-DVVSYNTIIAGYAQSGMYEDALR 228
Query: 92 LFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMY 151
+ + LKPDS+T SVL V GK IH ++I+ G DV I SS MY
Sbjct: 229 MVREMGTTD-LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 152 AKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLT 211
AK E + ++F + RD SWN++++ Y Q+G+ +AL LF++M + +P +V +
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 212 TVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLK 271
+VI +CA L L GK++H ++ GF S+ +I+SALVDMY KCG ++ AR++F++ +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 272 SVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMH 331
V+W A+I G++ G V LF M +G+KP +VL +CS G
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG--------- 458
Query: 332 GYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYF 391
L+D A F M+K V N + Y V D
Sbjct: 459 -----------------LVD---------EAWGYFNSMTK--VYGLNQELEHYAAVADLL 490
Query: 392 ----KALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVM 447
K Y+ + ++ +P ++++L +CS LE +++ I E M
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN----M 546
Query: 448 GA---LLDMYAKCGAVDEAFKVFNELPERDL-----VSWTSMIAAYGSHGRALEALKLFG 499
GA + +MYA G E K+ + ++ L SW M +HG F
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM--KNKTHG--------FV 596
Query: 500 EMQQSNARPDSIT-FL-ALLSACSHAGWV-DEGGYYFNLMISEYNIQPRNEHYSCLIDLL 556
+S+ D I FL A++ G+V D G ++ EH L L
Sbjct: 597 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDV---------DEEHKREL--LF 645
Query: 557 GRAGRLQEAYGILQSTP 573
G + RL A+GI+ + P
Sbjct: 646 GHSERLAVAFGIINTEP 662
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/689 (31%), Positives = 377/689 (54%), Gaps = 6/689 (0%)
Query: 7 LTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
++L+ C+ S+SL +G+ IH ++ + + L ++++Y C + A VF +
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 67 PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
+L + ++ Y++N A+ L+ +LQ L PD + + S++KAC VG+GK
Sbjct: 131 R-NLVSYTSVITGYSQNGQGAEAIRLYLKMLQED-LVPDQFAFGSIIKACASSSDVGLGK 188
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H +IK ++ ++ MY + N A ++F + +D+ SW+++I+ + Q G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 187 QAEKALELFKKMRGSG-FQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
+AL K+M G F PN + + +C+ L+ D G +IH IK ++
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
+L DMY +CG L AR VF+Q +WN +IAG ++ G + V +F +M G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P ++ S+L + ++ L G +H YII+ D+ + +SL+ +Y C + N+
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 366 FEKM-SKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAA 424
FE + D V WN +++ + + L ++ M +PD +T ++L C ++++
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 425 LEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAA 484
L+ G ++H + +++ L + + L+DMYAKCG++ +A ++F+ + RD+VSW+++I
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVG 548
Query: 485 YGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQP 544
Y G EAL LF EM+ + P+ +TF+ +L+ACSH G V+EG + M +E+ I P
Sbjct: 549 YAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISP 608
Query: 545 RNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKL 604
EH SC++DLL RAGRL EA + ++ D + TL SAC+ ++ + +K A+
Sbjct: 609 TKEHCSCVVDLLARAGRLNEAERFIDEM-KLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 605 LIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFA 664
+++ DP +S+ +++L +M+AS W+ +R MK+ ++K PG SWIEI D+I FFA
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Query: 665 EDKFYPQADMVYECLAILAGHMEKDELLP 693
ED F+P+ D +Y L + M DE P
Sbjct: 728 EDIFHPERDDIYTVLHNIWSQM-LDECNP 755
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 256/504 (50%), Gaps = 7/504 (1%)
Query: 72 LWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTH 131
L N + S K+ Y ALE FD +N K TY S++ AC S+ G+ IH H
Sbjct: 33 LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 132 LIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKA 191
++ + D ++ + MY KC S A ++FD M ER++ S+ +VI+ Y Q+GQ +A
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 192 LELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDM 251
+ L+ KM P+ ++I +CA D+ GK++H + IK S +AL+ M
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 252 YGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGI-KPTLTT 310
Y + + A VF +K +++W+++IAG+S G + M G+ P
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 311 ISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS 370
S L +CS + +G +HG I++++ G+ SL D+Y +CG ++SA VF+++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 371 KTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKE 430
+ D WNV+I+G G +A++++S M+ G PDA++ S+L A ++ AL +G +
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 431 IHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPER-DLVSWTSMIAAYGSHG 489
IH++II+ + V +LL MY C + F +F + D VSW +++ A H
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 490 RALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGG--YYFNLMISEYNIQPRNE 547
+ +E L+LF M S PD IT LL C + G + ++L + + P
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL---KTGLAPEQF 509
Query: 548 HYSCLIDLLGRAGRLQEAYGILQS 571
+ LID+ + G L +A I S
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDS 533
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/679 (32%), Positives = 374/679 (55%), Gaps = 6/679 (0%)
Query: 16 SKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNG 75
S S+ H +++ G +N+I+L L YA +F ++ P D+ L+N
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP-DVFLFNV 88
Query: 76 LMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKT 135
LM ++ N ++L +F L ++ LKP+S TY + A G G++IH +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 136 GFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELF 195
G ++++ S+ MY K E A K+FD M E+D WNT+IS Y ++ +++++F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 196 KKM-RGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGK 254
+ + S + ++ TL ++ + A L +L G +IH K G S Y+ + + +Y K
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 255 CGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSV 314
CG ++M +F + +VA+NA+I GY+S G+++ + LF + G + +T+ S+
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 315 LMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDV 374
+ SG L +HGY +++ ++++L +Y K + SA +F++ + +
Sbjct: 329 V---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 375 VYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNH 434
WN MISGY G A++++ +M++ P+ VT T +L AC+QL AL GK +H+
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 435 IIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEA 494
+ + E++ V AL+ MYAKCG++ EA ++F+ + +++ V+W +MI+ YG HG+ EA
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA 505
Query: 495 LKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLID 554
L +F EM S P +TFL +L ACSHAG V EG FN MI Y +P +HY+C++D
Sbjct: 506 LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVD 565
Query: 555 LLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSS 614
+LGRAG LQ A +++ I + + TL ACR+H+D + +++ L E DPD+
Sbjct: 566 ILGRAGHLQRALQFIEAM-SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVG 624
Query: 615 TYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADM 674
+++LSN++++ + + + +R K+ L K PG + IEIG+ F + D+ +PQ
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKE 684
Query: 675 VYECLAILAGHMEKDELLP 693
+YE L L G M + P
Sbjct: 685 IYEKLEKLEGKMREAGYQP 703
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 263/511 (51%), Gaps = 8/511 (1%)
Query: 10 LRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLD 69
+ +G + + G++IH + V G + + L +++ +YF + A VF + D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-D 184
Query: 70 LSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIH 129
LWN +++ Y KN MY+ ++++F L+ + D+ T +L A L + +G IH
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 130 THLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAE 189
+ KTG + + +Y+KC + +F E + D+ ++N +I Y +G+ E
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 190 KALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALV 249
+L LFK++ SG + S TL +++ LM + IH +K F+S + +S+AL
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALT 361
Query: 250 DMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLT 309
+Y K +E AR++F+++ KS+ +WNA+I+GY+ G ++ + LF M + P
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 310 TISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKM 369
TI+ +L +C++ G L GK +H + + ++++++LI +Y KCG ++ A +F+ M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 370 SKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGK 429
+K + V WN MISGY G +AL I+ +M G P VTF VL ACS +++G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 430 EIHNHIIES-KLETNEIVMGALLDMYAKCGAVDEAFKVFNELP-ERDLVSWTSMIAAYGS 487
EI N +I E + ++D+ + G + A + + E W +++ A
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 488 HGRALEALKLFGEMQQSNARPDSITFLALLS 518
H A + ++ + + PD++ + LLS
Sbjct: 602 HKDTNLARTVSEKLFELD--PDNVGYHVLLS 630
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 191/372 (51%), Gaps = 8/372 (2%)
Query: 1 MNITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLV 60
++ T +L +L + L+ G IH G ++ + I+LY C +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGL 119
F+ P D+ +N ++ YT N +L LF +++L L+ S T S++ G L
Sbjct: 279 FREFRKP-DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR--SSTLVSLVPVSGHL 335
Query: 120 GSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVI 179
+ IH + +K+ FL ++++ +Y+K N E A K+FDE E+ + SWN +I
Sbjct: 336 MLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 180 SCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFV 239
S Y Q+G E A+ LF++M+ S F PN VT+T ++S+CA+L L GK +H F
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 240 SDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM 299
S Y+S+AL+ MY KCG + AR +F+ K+ V WN +I+GY G + + +F+ M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 300 NEEGIKPTLTTISSVLMSCSRSGQLKHG-KVMHGYIIRNKIQGDVFINSSLIDLYFKCGR 358
GI PT T VL +CS +G +K G ++ + I R + V + ++D+ + G
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 572
Query: 359 VSSAENVFEKMS 370
+ A E MS
Sbjct: 573 LQRALQFIEAMS 584
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/660 (32%), Positives = 372/660 (56%), Gaps = 5/660 (0%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
+++R+C G + + G +H V+ G + N + SL +LY C + A +F ++ N
Sbjct: 129 SVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA 188
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+S W +++S + AL+ + +++ + P+ +T+ +L A LG + GK
Sbjct: 189 DTIS-WTMMISSLVGARKWREALQFYSEMVK-AGVPPNEFTFVKLLGASSFLG-LEFGKT 245
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
IH+++I G L+VV+ +S Y++ + E AV++ + E+DV W +V+S + ++ +
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSA 247
A++A+ F +MR G QPN+ T + ++S C+ + LD GK+IH + IK GF + + +A
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 248 LVDMYGKCGCLEM-AREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
LVDMY KC E+ A VF V +VV+W LI G G + C L M + ++P
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 307 TLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVF 366
+ T+S VL +CS+ ++ +H Y++R + G++ + +SL+D Y +V A NV
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALE 426
M + D + + +++ + +G + AL++ + M G + D ++ + A + L ALE
Sbjct: 486 RSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 427 KGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYG 486
GK +H + ++S V+ +L+DMY+KCG++++A KVF E+ D+VSW +++
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 487 SHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRN 546
S+G AL F EM+ PDS+TFL LLSACS+ D G YF +M YNI+P+
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 547 EHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLI 606
EHY L+ +LGRAGRL+EA G+++ T ++ +A + TL ACR ++ +GE +A +
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVE-TMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGL 724
Query: 607 EKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAED 666
P D + YI+L+++Y K + +K R M E L K G S +E+ ++ F +ED
Sbjct: 725 ALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/608 (26%), Positives = 300/608 (49%), Gaps = 9/608 (1%)
Query: 16 SKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNG 75
S S + G IH V+ GL N+ LC +L++LY A +F + + + W
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFA-WTV 94
Query: 76 LMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKT 135
+++++TK+ + +AL LF+ ++ + P+ +T+ SV+++C GL + G +H +IKT
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASG-THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 136 GFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELF 195
GF + V+ SS + +Y+KC F+ A ++F + D SW +IS + +AL+ +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 196 KKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKC 255
+M +G PN T ++ + + + L+ GK IH I G + + ++LVD Y +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASS-FLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 256 GCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVL 315
+E A V + + V W ++++G+ +K V F M G++P T S++L
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 316 MSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS-SAENVFEKMSKTDV 374
CS L GK +H I+ + + ++L+D+Y KC A VF M +V
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 375 VYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNH 434
V W +I G V G + +M + +P+ VT + VL ACS+L + + EIH +
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 435 IIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEA 494
++ ++ +V +L+D YA VD A+ V + RD +++TS++ + G+ A
Sbjct: 453 LLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA 512
Query: 495 LKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLID 554
L + M R D ++ +SA ++ G + E G + + + + L+D
Sbjct: 513 LSVINYMYGDGIRMDQLSLPGFISASANLGAL-ETGKHLHCYSVKSGFSGAASVLNSLVD 571
Query: 555 LLGRAGRLQEAYGILQ--STPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDD 612
+ + G L++A + + +TP++ GL+S L S + + E++ + E +PD
Sbjct: 572 MYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR--MKETEPDS 629
Query: 613 SSTYIVLS 620
+ I+LS
Sbjct: 630 VTFLILLS 637
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 170/333 (51%), Gaps = 9/333 (2%)
Query: 315 LMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDV 374
++S S + G +H +I+ + ++ + ++L+ LY K + +A +F++MS V
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 375 VYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNH 434
W VMIS + ++ AL+++ +M G P+ TF+SV+ +C+ L + G +H
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 435 IIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEA 494
+I++ E N +V +L D+Y+KCG EA ++F+ L D +SWT MI++ + EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 495 LKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLID 554
L+ + EM ++ P+ TF+ LL A S G E G + I I + L+D
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 555 LLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKD---PD 611
+ ++++A +L S+ E +D L +++ S R++ E + L +
Sbjct: 268 FYSQFSKMEDAVRVLNSSGE--QDVFLWTSVVSG--FVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 612 DSSTYIVLSNMYASVKKWDEVRKIRLKMKELGL 644
++ TY + ++ ++V+ D ++I + ++G
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 147/291 (50%), Gaps = 8/291 (2%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
N+ + +LR C+ + ++ IH ++ + + + SL++ Y S + DYA V
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
+++ +++ + L+ + + + AL + + + + ++ D + P + A LG+
Sbjct: 486 RSMKRRDNIT-YTSLVTRFNELGKHEMALSVINYMYGDG-IRMDQLSLPGFISASANLGA 543
Query: 122 VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISC 181
+ GK +H + +K+GF + +S MY+KC S E A K+F+E++ DV SWN ++S
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 182 YYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCA--RLMDLD-RGKEIHKEFIKDGF 238
+G AL F++MR +P+SVT ++S+C+ RL DL ++ K+
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 239 VSDSYISSALVDMYGKCGCLEMAREVFEQTVLK-SVVAWNALIAGYSSRGD 288
+ Y+ LV + G+ G LE A V E LK + + + L+ RG+
Sbjct: 664 QVEHYVH--LVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN 712
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 350/587 (59%), Gaps = 24/587 (4%)
Query: 95 MLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIK-----TGFLLDVVI-ASSTA 148
+L N + DS+ Y S++ + + K IH L+ +GFL+ +I ASS+
Sbjct: 11 LLYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSF 66
Query: 149 GMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSV 208
G A ++FD++ + WN +I Y ++ + AL ++ M+ + P+S
Sbjct: 67 G------DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSF 120
Query: 209 TLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQT 268
T ++ +C+ L L G+ +H + + GF +D ++ + L+ +Y KC L AR VFE
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 269 VL--KSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKH 326
L +++V+W A+++ Y+ G+ +++F +M + +KP + SVL + + LK
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 327 GKVMHGYIIRN--KIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGY 384
G+ +H +++ +I+ D+ I SL +Y KCG+V++A+ +F+KM +++ WN MISGY
Sbjct: 241 GRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 385 VTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNE 444
G +A+ ++ +M +PD ++ TS + AC+Q+ +LE+ + ++ ++ S +
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 445 IVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQS 504
+ AL+DM+AKCG+V+ A VF+ +RD+V W++MI YG HGRA EA+ L+ M++
Sbjct: 359 FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 505 NARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQE 564
P+ +TFL LL AC+H+G V EG ++FN M +++ I P+ +HY+C+IDLLGRAG L +
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 565 AYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYA 624
AY +++ P ++ + L SAC+ HR +E+GE A+ L DP ++ Y+ LSN+YA
Sbjct: 478 AYEVIKCMP-VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 625 SVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQ 671
+ + WD V ++R++MKE GL K+ GCSW+E+ R++ F DK +P+
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 271/484 (55%), Gaps = 8/484 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
+L+ + T LK+ IH +++ LGLQ + L LI+ S + +A VF + P
Sbjct: 26 SLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP 82
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+ WN ++ Y++N + AL ++ +Q + PDS+T+P +LKAC GL + +G+
Sbjct: 83 -QIFPWNAIIRGYSRNNHFQDALLMYSN-MQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFD--EMSERDVASWNTVISCYYQD 185
+H + + GF DV + + +YAKC A +F+ + ER + SW ++S Y Q+
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
G+ +ALE+F +MR +P+ V L +V+++ L DL +G+ IH +K G + +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIK 305
+L MY KCG + A+ +F++ +++ WNA+I+GY+ G ++ + +F M + ++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 306 PTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
P +I+S + +C++ G L+ + M+ Y+ R+ + DVFI+S+LID++ KCG V A V
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
F++ DVV W+ MI GY G +A+++Y M+ G P+ VTF +L AC+ +
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVS-WTSMIAA 484
+G N + + K+ + ++D+ + G +D+A++V +P + V+ W ++++A
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 485 YGSH 488
H
Sbjct: 501 CKKH 504
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 210/389 (53%), Gaps = 8/389 (2%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP- 67
LL+ C+G L+ G+ +H +V LG ++ + LI LY C+ A VF+ + P
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
+ W ++++Y +N + ALE+F + + +KPD SVL A L + G+
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
IH ++K G ++ + S MYAKC A +FD+M ++ WN +IS Y ++G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSA 247
A +A+++F +M +P+++++T+ IS+CA++ L++ + +++ + + D +ISSA
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 248 LVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPT 307
L+DM+ KCG +E AR VF++T+ + VV W+A+I GY G ++ + L+ M G+ P
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 308 LTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFE 367
T +LM+C+ SG ++ G + +KI + +IDL + G + A V +
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 368 KMS-KTDVVYWNVMISG-----YVTVGDY 390
M + V W ++S +V +G+Y
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEY 512
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 25/289 (8%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
++++L T + LK+G+ IH VV +GL+ L SL +Y C A ++F +
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+P +L LWN +++ Y KN A+++F ++ N ++PD+ + S + AC +GS+
Sbjct: 285 SP-NLILWNAMISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQA 342
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
+ ++ ++ ++ + DV I+S+ M+AKC S E A +FD +RDV W+ +I Y
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGF-----VS 240
G+A +A+ L++ M G PN VT ++ +C H +++G+ ++
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGWWFFNRMA 451
Query: 241 DSYIS------SALVDMYGKCGCLEMAREVFE-QTVLKSVVAWNALIAG 282
D I+ + ++D+ G+ G L+ A EV + V V W AL++
Sbjct: 452 DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/658 (33%), Positives = 365/658 (55%), Gaps = 9/658 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
+LL+ C + L G IHQ+V+ G ++ + SL+NLY +A VF+ +
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM-RE 109
Query: 68 LDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
D+ W ++ Y++ + A L +M Q +KP T +L+ G+ + +
Sbjct: 110 RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG--IKPGPVT---LLEMLSGVLEITQLQ 164
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H + GF D+ + +S +Y KC+ A +FD+M +RD+ SWNT+IS Y G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
+ L+L +MRG G +P+ T +S + DL+ G+ +H + +K GF D ++ +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
AL+ MY KCG E + V E K VV W +I+G G ++ + +F M + G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 307 TLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVF 366
+ I+SV+ SC++ G G +HGY++R+ D +SLI +Y KCG + + +F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMK-EVGAKPDAVTFTSVLPACSQLAAL 425
E+M++ D+V WN +ISGY D KAL ++ +MK + + D+ T S+L ACS AL
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Query: 426 EKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAY 485
GK IH +I S + +V AL+DMY+KCG ++ A + F+ + +D+VSW +IA Y
Sbjct: 465 PVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGY 524
Query: 486 GSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPR 545
G HG+ AL+++ E S P+ + FLA+LS+CSH G V +G F+ M+ ++ ++P
Sbjct: 525 GFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPN 584
Query: 546 NEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLL 605
+EH +C++DLL RA R+++A+ + R +L + ACR + E+ + I + +
Sbjct: 585 HEHLACVVDLLCRAKRIEDAFKFYKENF-TRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 606 IEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFF 663
IE P D+ Y+ L + +A++K+WD+V + +M+ LGL+K PG S IE+ + FF
Sbjct: 644 IELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFF 701
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 271/477 (56%), Gaps = 6/477 (1%)
Query: 90 LELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAG 149
L F +L N L PD++T+PS+LKAC L + G IH ++ GF D I+SS
Sbjct: 31 LSTFSSMLANKLL-PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN 89
Query: 150 MYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVT 209
+YAK A K+F+EM ERDV W +I CY + G +A L +MR G +P VT
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 210 LTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTV 269
L ++S ++++ + + +H + GF D + ++++++Y KC + A+++F+Q
Sbjct: 150 LLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 270 LKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKV 329
+ +V+WN +I+GY+S G+ +KL +RM +G++P T + L L+ G++
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRM 266
Query: 330 MHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGD 389
+H I++ D+ + ++LI +Y KCG+ ++ V E + DVV W VMISG + +G
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 390 YFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGA 449
KAL ++S+M + G+ + SV+ +C+QL + + G +H +++ + + +
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS 386
Query: 450 LLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQ-QSNARP 508
L+ MYAKCG +D++ +F + ERDLVSW ++I+ Y + +AL LF EM+ ++ +
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 509 DSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEA 565
DS T ++LL ACS AG + G ++I + I+P + + L+D+ + G L+ A
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAA 502
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 260/465 (55%), Gaps = 4/465 (0%)
Query: 7 LTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
+TLL +G + + + +H V G +IA+ S++NLY C + A +F ++
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 67 PLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
D+ WN +++ Y L+L ++ L+PD T+ + L G + + +G+
Sbjct: 208 R-DMVSWNTMISGYASVGNMSEILKLL-YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
M+H ++KTGF +D+ + ++ MY KC E + ++ + + +DV W +IS + G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISS 246
+AEKAL +F +M SG +S + +V++SCA+L D G +H ++ G+ D+ +
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 247 ALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKP 306
+L+ MY KCG L+ + +FE+ + +V+WNA+I+GY+ D + LF M + ++
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ 445
Query: 307 TLT-TISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENV 365
+ T+ S+L +CS +G L GK++H +IR+ I+ ++++L+D+Y KCG + +A+
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 366 FEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
F+ +S DVV W ++I+GY G AL IYS+ G +P+ V F +VL +CS +
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565
Query: 426 EKGKEIHNHIIES-KLETNEIVMGALLDMYAKCGAVDEAFKVFNE 469
++G +I + ++ +E N + ++D+ + +++AFK + E
Sbjct: 566 QQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 209/400 (52%), Gaps = 4/400 (1%)
Query: 175 WNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFI 234
+N+ I+ G ++ L F M + P++ T +++ +CA L L G IH++ +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 235 KDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVK 294
+GF SD YISS+LV++Y K G L AR+VFE+ + VV W A+I YS G
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 295 LFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYF 354
L M +GIKP T+ +L QL + +H + + D+ + +S+++LY
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 355 KCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTS 414
KC V A+++F++M + D+V WN MISGY +VG+ + L + M+ G +PD TF +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 415 VLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERD 474
L + LE G+ +H I+++ + + + AL+ MY KCG + +++V +P +D
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 475 LVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFN 534
+V WT MI+ GRA +AL +F EM QS + S +++++C+ G D G
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 535 LMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPE 574
++ + + LI + + G L ++ I + E
Sbjct: 371 YVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE 409
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 156/306 (50%), Gaps = 4/306 (1%)
Query: 268 TVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHG 327
+VL S +N+ I SS GD K + F M + P T S+L +C+ +L G
Sbjct: 6 SVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFG 65
Query: 328 KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTV 387
+H ++ N D +I+SSL++LY K G ++ A VFE+M + DVV+W MI Y
Sbjct: 66 LSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRA 125
Query: 388 GDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVM 447
G +A ++ ++M+ G KP VT +L ++ L+ +H+ + + + VM
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVM 182
Query: 448 GALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNAR 507
++L++Y KC V +A +F+++ +RD+VSW +MI+ Y S G E LKL M+ R
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 508 PDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYG 567
PD TF A LS S E G + I + + LI + + G+ + +Y
Sbjct: 243 PDQQTFGASLSV-SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 568 ILQSTP 573
+L++ P
Sbjct: 302 VLETIP 307
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 331/585 (56%), Gaps = 2/585 (0%)
Query: 106 SYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFD 165
SY+Y + +AC L S+ G+++H + V++ + MY +C S E A K+FD
Sbjct: 83 SYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 166 EMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDR 225
EMSE + S T+IS Y + G +KA+ LF M SG +P S TT++ S LD
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF 202
Query: 226 GKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSS 285
G++IH I+ G S++ I + +V+MY KCG L A+ VF+Q +K VA L+ GY+
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 286 RGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFI 345
G ++ +KLF + EG++ S VL +C+ +L GK +H + + ++ +V +
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 346 NSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGA 405
+ L+D Y KC SA F+++ + + V W+ +ISGY + + +A+ + ++ A
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 406 KP-DAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAF 464
++ T+TS+ ACS LA G ++H I+ L ++ AL+ MY+KCG +D+A
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 465 KVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAG 524
+VF + D+V+WT+ I+ + +G A EAL+LF +M +P+S+TF+A+L+ACSHAG
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 525 WVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLST 584
V++G + + M+ +YN+ P +HY C+ID+ R+G L EA +++ P DA
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP-FEPDAMSWKC 561
Query: 585 LFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGL 644
S C H+++E+GE + L + DP+D++ Y++ N+Y KW+E ++ M E L
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
Query: 645 RKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKD 689
+K CSWI+ +I F DK +PQ +YE L G ME D
Sbjct: 622 KKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGD 666
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 268/536 (50%), Gaps = 16/536 (2%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQN-NIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
L C +SL G+++H ++ +G++N ++ L ++ +Y C++ + A +F + +
Sbjct: 89 LFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM-SE 146
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
L+ ++++Y + + A+ LF +L + KP S Y ++LK+ ++ G+
Sbjct: 147 LNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD-KPPSSMYTTLLKSLVNPRALDFGRQ 205
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
IH H+I+ G + I + MY KC A ++FD+M+ + + ++ Y Q G+
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSA 247
A AL+LF + G + +S + V+ +CA L +L+ GK+IH K G S+ + +
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 248 LVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPT 307
LVD Y KC E A F++ + V+W+A+I+GY + VK F + +
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
Query: 308 LT-TISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVF 366
+ T +S+ +CS G +H I+ + G + S+LI +Y KCG + A VF
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALE 426
E M D+V W ISG+ G+ +AL ++ M G KP++VTF +VL ACS +E
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 427 KGKEIHNHIIESKLETNEIV-----MGALLDMYAKCGAVDEAFKVFNELP-ERDLVSWTS 480
+GK H +++ L + ++D+YA+ G +DEA K +P E D +SW
Sbjct: 506 QGK----HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLM 536
++ +H + LE ++ GE + D+ ++ + + AG +E LM
Sbjct: 562 FLSGCWTH-KNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLM 616
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 202/382 (52%), Gaps = 11/382 (2%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFK--TID 65
TLL++ ++L G+ IH V+ GL +N ++ ++N+Y C A VF +
Sbjct: 189 TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK 248
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
P+ + GLM YT+ AL+LF D++ + ++ DS+ + VLKAC L + +
Sbjct: 249 KPVACT---GLMVGYTQAGRARDALKLFVDLVTEG--VEWDSFVFSVVLKACASLEELNL 303
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
GK IH + K G +V + + Y KC+SFE A + F E+ E + SW+ +IS Y Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 185 DGQAEKALELFKKMRGSGFQP-NSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSY 243
Q E+A++ FK +R NS T T++ +C+ L D + G ++H + IK + Y
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 244 ISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG 303
SAL+ MY KCGCL+ A EVFE +VAW A I+G++ G++ ++LF +M G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 304 IKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRN-KIQGDVFINSSLIDLYFKCGRVSSA 362
+KP T +VL +CS +G ++ GK ++R + + +ID+Y + G + A
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 363 ENVFEKMS-KTDVVYWNVMISG 383
+ M + D + W +SG
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSG 565
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 119/223 (53%)
Query: 299 MNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGR 358
M++ G+ + + + +C L HG+++H + V + + ++ +Y +C
Sbjct: 74 MDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRS 133
Query: 359 VSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPA 418
+ A+ +F++MS+ + V MIS Y G KA+ ++S M G KP + +T++L +
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 419 CSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSW 478
AL+ G++IH H+I + L +N + +++MY KCG + A +VF+++ + V+
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 479 TSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACS 521
T ++ Y GRA +ALKLF ++ DS F +L AC+
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 54/290 (18%)
Query: 392 KALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALL 451
+A +M + G + ++ + AC +L +L G+ +H+ + + ++ +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 452 DMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSI 511
MY +C ++++A K+F+E+ E + VS T+MI+AY G +A+ LF M S +P S
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 512 TFLALLSA----------------------CSHA-------------GWVDEGGYYFNLM 536
+ LL + CS+ GW+ F+ M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 537 ISEYNIQPRNEHYSCLIDLLG--RAGRLQEAYGILQS--TPEIREDAGLLSTLFSACRLH 592
+ + +C ++G +AGR ++A + T + D+ + S + AC
Sbjct: 246 AVKKPV-------ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 593 RDIEMGEKI----AKLLIEKDPDDSST----YIVLSNMYASVKKWDEVRK 634
++ +G++I AKL +E + + YI S+ ++ + + E+R+
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
++ + C+ G +H + L + +LI +Y C D A VF+++DNP
Sbjct: 392 SIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP 451
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
D+ W ++ + AL LF+ ++ +KP+S T+ +VL AC G V GK
Sbjct: 452 -DIVAWTAFISGHAYYGNASEALRLFEKMVSCG-MKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 128 -IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMS-ERDVASWNTVISCYYQD 185
+ T L K + +YA+ + A+K M E D SW C+
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWK----CFLSG 565
Query: 186 GQAEKALEL 194
K LEL
Sbjct: 566 CWTHKNLEL 574
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/686 (31%), Positives = 363/686 (52%), Gaps = 13/686 (1%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIAL-----CKSLINLYFSCQNYDYAMLVFK 62
T+ R CT S SL + K + + +V + Q + +SLIN N A VF
Sbjct: 10 TIQRFCTTSISLLQ-KPVEENIVRISNQVMVKFDPNSHLRSLIN----AGNLRAARQVFD 64
Query: 63 TIDNPLDLSLWNGLMASYTKNYMYITALELFD-MLLQNPYLKPDSYTYPSVLKACGGLGS 121
+ + D+ W ++ Y AL LF M + + + PD+ VLKACG +
Sbjct: 65 KMPHG-DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSN 123
Query: 122 VGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISC 181
+ G+ +H + +KT L V + SS MY + + + ++F EM R+ +W +I+
Sbjct: 124 IAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITG 183
Query: 182 YYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSD 241
G+ ++ L F +M S ++ T + +CA L + GK IH I GFV+
Sbjct: 184 LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 242 SYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNE 301
++++L MY +CG ++ +FE + VV+W +LI Y G V+ F +M
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 302 EGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSS 361
+ P T +S+ +C+ +L G+ +H ++ + + +++S++ +Y CG + S
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 362 AENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQ 421
A +F+ M D++ W+ +I GY G + +S M++ G KP S+L
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 422 LAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSM 481
+A +E G+++H + LE N V +L++MY+KCG++ EA +F E D+VS T+M
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 482 IAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYN 541
I Y HG++ EA+ LF + + RPDS+TF+++L+AC+H+G +D G +YFN+M YN
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 542 IQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKI 601
++P EHY C++DLL RAGRL +A ++ ++D + +TL AC+ DIE G +
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV-VWTTLLIACKAKGDIERGRRA 602
Query: 602 AKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQP 661
A+ ++E DP ++ + L+N+Y+S +E +R MK G+ K PG S I+I D +
Sbjct: 603 AERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSA 662
Query: 662 FFAEDKFYPQADMVYECLAILAGHME 687
F + D+F+PQ++ +Y L + E
Sbjct: 663 FVSGDRFHPQSEDIYNILELAVSGAE 688
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 46/280 (16%)
Query: 7 LTLLRTCTGSKSLKEG-KIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
L L + +G+ ++ EG + +H + GL+ N + SLIN+Y C + A ++F D
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+SL ++ Y ++ A++LF+ L+ + +PDS T+ SVL AC G + +G
Sbjct: 474 RDDIVSL-TAMINGYAEHGKSKEAIDLFEKSLKVGF-RPDSVTFISVLTACTHSGQLDLG 531
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQD 185
H + T M + C V + C +
Sbjct: 532 ----FHYFN--------MMQETYNMRPAKEHYGCMVDLL----------------C--RA 561
Query: 186 GQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYIS 245
G+ A ++ +M ++ + V TT++ +C D++RG+ + ++ D +
Sbjct: 562 GRLSDAEKMINEM---SWKKDDVVWTTLLIACKAKGDIERGRRAAERILE----LDPTCA 614
Query: 246 SALV---DMYGKCGCLEMAREVFEQTVLKSVV---AWNAL 279
+ALV ++Y G LE A V + K V+ W+++
Sbjct: 615 TALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/673 (31%), Positives = 374/673 (55%), Gaps = 7/673 (1%)
Query: 4 TRILTLLRTCTGSKSLKEGKIIHQKVVTLGL---QNNIALCKSLINLYFSCQNYDYAMLV 60
+ ++ L R C LK + IH V+T G + +LI++Y C + + A V
Sbjct: 95 SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKV 154
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F + + +S +N L ++Y++N + + + Y+KP+S T+ S+++ C L
Sbjct: 155 FDKMPHRNVVS-YNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVIS 180
V +G +++ +IK G+ +VV+ +S GMY+ C E A ++FD ++ RD +WNT+I
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 181 CYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVS 240
++ + E L F+ M SG P T + V++ C++L GK IH I ++
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 241 DSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM- 299
D + +AL+DMY CG + A VF + ++V+WN++I+G S G + + ++ R+
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 300 NEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRV 359
+P T S+ + + + + HGK++HG + + + VF+ ++L+ +YFK
Sbjct: 394 RMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREA 453
Query: 360 SSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPAC 419
SA+ VF+ M + DVV W MI G+ +G+ A+ + +M + D + +SV+ AC
Sbjct: 454 ESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC 513
Query: 420 SQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWT 479
S +A L +G+ H I + + V GAL+DMY K G + A +F+ DL W
Sbjct: 514 SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWN 573
Query: 480 SMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISE 539
SM+ AY HG +AL F ++ ++ PD++T+L+LL+ACSH G +G + +N M E
Sbjct: 574 SMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KE 632
Query: 540 YNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGE 599
I+ +HYSC+++L+ +AG + EA +++ +P A L TL SAC R++++G
Sbjct: 633 QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGL 692
Query: 600 KIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEI-GDR 658
A+ +++ DP+D++T+I+LSN+YA +W++V ++R K++ L K+PG SWIE+ +
Sbjct: 693 YAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNN 752
Query: 659 IQPFFAEDKFYPQ 671
Q F + D+ P+
Sbjct: 753 TQVFSSGDQSNPE 765
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 195/383 (50%), Gaps = 11/383 (2%)
Query: 150 MYAKCNSFECAVKMFDEMSERDVASWNTVISCY-YQDGQAEKALELFK--KMRGSGFQPN 206
MY +C+S E A K+FD+M +R++ + + + + Y + ++ K + F P
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPL 90
Query: 207 SVTLTTVIS---SCARLMDLDRGKEIHKEFIKDG---FVSDSYISSALVDMYGKCGCLEM 260
+ ++V+ C + L R ++IH + G Y ++ L+ MY +CG LE
Sbjct: 91 NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 261 AREVFEQTVLKSVVAWNALIAGYSSRGDSKS-CVKLFWRMNEEGIKPTLTTISSVLMSCS 319
AR+VF++ ++VV++NAL + YS D S L M E +KP +T +S++ C+
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
Query: 320 RSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNV 379
+ G ++ II+ +V + +S++ +Y CG + SA +F+ ++ D V WN
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 380 MISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESK 439
MI G + L + +M G P T++ VL CS+L + GK IH II S
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 440 LETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFG 499
+ + ALLDMY CG + EAF VF + +LVSW S+I+ +G +A+ ++
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 500 E-MQQSNARPDSITFLALLSACS 521
++ S RPD TF A +SA +
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATA 413
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 20/297 (6%)
Query: 243 YISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIA--GYSSRGDS--KSCVKL--- 295
Y ++ L+ MY +C LE AR+VF++ +++V L A Y S G S +KL
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 296 ----FWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIR---NKIQGDVFINSS 348
F +NE +++ + C LK + +H ++ + N++
Sbjct: 83 QMIFFMPLNE-----IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 349 LIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFK-ALAIYSDMKEVGAKP 407
LI +Y +CG + A VF+KM +VV +N + S Y D+ A + + M KP
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 408 DAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVF 467
++ TFTS++ C+ L + G +++ II+ N +V ++L MY+ CG ++ A ++F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 468 NELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAG 524
+ + RD V+W +MI + + + L F M S P T+ +L+ CS G
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 348/603 (57%), Gaps = 11/603 (1%)
Query: 98 QNP--YLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIA-SSTAGMYAKC 154
+NP Y + T + L+ C G+ IH +++ GFL D A +S MYAKC
Sbjct: 50 ENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC 109
Query: 155 NSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVI 214
AV +F SERDV +N +IS + +G A+E +++MR +G P+ T +++
Sbjct: 110 GLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
Query: 215 SSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKS-V 273
+ M+L K++H K GF SD Y+ S LV Y K +E A++VF++ +
Sbjct: 169 KG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDS 227
Query: 274 VAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGY 333
V WNAL+ GYS + + +F +M EEG+ + TI+SVL + + SG + +G+ +HG
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGL 287
Query: 334 IIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKA 393
++ D+ ++++LID+Y K + A ++FE M + D+ WN ++ + GD+
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGT 347
Query: 394 LAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKL----ETNEIVMGA 449
LA++ M G +PD VT T+VLP C +LA+L +G+EIH ++I S L +NE + +
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 450 LLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPD 509
L+DMY KCG + +A VF+ + +D SW MI YG AL +F M ++ +PD
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Query: 510 SITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGIL 569
ITF+ LL ACSH+G+++EG + M + YNI P ++HY+C+ID+LGRA +L+EAY +
Sbjct: 468 EITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELA 527
Query: 570 QSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKW 629
S P I ++ + ++ S+CRLH + ++ K L E +P+ Y+++SN+Y K+
Sbjct: 528 ISKP-ICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKY 586
Query: 630 DEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKD 689
+EV +R M++ ++K PGCSWI + + + FF ++ +P+ +++ L+++ HM
Sbjct: 587 EEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGH 646
Query: 690 ELL 692
E +
Sbjct: 647 EYM 649
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 267/513 (52%), Gaps = 17/513 (3%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLG-LQNNIALCKSLINLYFSCQNYDYAMLV 60
N+ + L+ C K G+ IH +V G L ++ SL+N+Y C A+LV
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 61 FKTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLG 120
F + D+ +N L++ + N + A+E + + N L PD YT+PS+LK +
Sbjct: 119 FGGSER--DVFGYNALISGFVVNGSPLDAMETYREMRANGIL-PDKYTFPSLLKGSDAME 175
Query: 121 SVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVAS-WNTVI 179
+ K +H K GF D + S Y+K S E A K+FDE+ +RD + WN ++
Sbjct: 176 LSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 180 SCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFV 239
+ Y Q + E AL +F KMR G + T+T+V+S+ D+D G+ IH +K G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 240 SDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM 299
SD +S+AL+DMYGK LE A +FE + + WN+++ + GD + LF RM
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 300 NEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYII----RNKIQGDVFINSSLIDLYFK 355
GI+P + T+++VL +C R L+ G+ +HGY+I N+ + FI++SL+D+Y K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 356 CGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSV 415
CG + A VF+ M D WN+MI+GY AL ++S M G KPD +TF +
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 416 LPACSQLAALEKGKEI--HNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPER 473
L ACS L +G+ + + L T++ ++DM + ++EA+++ P
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSD-HYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 474 D-LVSWTSMIAAYGSHGR---ALEALKLFGEMQ 502
D V W S++++ HG AL A K E++
Sbjct: 534 DNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/477 (39%), Positives = 285/477 (59%), Gaps = 5/477 (1%)
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
E AL L+++M+ SG +P+ T V +CA+L ++ G+ +H K G D +I+ +L
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTL 308
+ MY KCG + AR++F++ + V+WN++I+GYS G +K + LF +M EEG +P
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 309 TTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEK 368
T+ S+L +CS G L+ G+++ I KI F+ S LI +Y KCG + SA VF +
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 369 MSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKG 428
M K D V W MI+ Y G +A ++ +M++ G PDA T ++VL AC + ALE G
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 429 KEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSH 488
K+I H E L+ N V L+DMY KCG V+EA +VF +P ++ +W +MI AY
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 489 GRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEH 548
G A EAL LF M + P ITF+ +LSAC HAG V +G YF+ M S + + P+ EH
Sbjct: 414 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 549 YSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIE- 607
Y+ +IDLL RAG L EA+ ++ P + D +L+ + AC +D+ + EK ++L+E
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPG-KPDEIMLAAILGACHKRKDVAIREKAMRMLMEM 529
Query: 608 KDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFA 664
K+ ++ Y++ SN+ A +K WDE K+R M++ G+ K PGCSWIEI + F A
Sbjct: 530 KEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 247/474 (52%), Gaps = 26/474 (5%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
L LL+ C L++ I +++ ++ L + L +++Y+ +F +
Sbjct: 40 FLFLLKKCISVNQLRQ---IQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTE 92
Query: 66 NPLDLSLWNGLMASYTKNYM-YITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
P S +N ++ T + + AL L+ + + LKPD +TY V AC L +G+
Sbjct: 93 EPNHYS-FNYMIRGLTNTWNDHEAALSLYRRM-KFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 125 GKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQ 184
G+ +H+ L K G DV I S MYAKC A K+FDE++ERD SWN++IS Y +
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYI 244
G A+ A++LF+KM GF+P+ TL +++ +C+ L DL G+ + + I +++
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGI 304
S L+ MYGKCG L+ AR VF Q + K VAW A+I YS G S KLF+ M + G+
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 305 KPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAEN 364
P T+S+VL +C G L+ GK + + +Q ++++ + L+D+Y KCGRV A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 365 VFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAA 424
VFE M + WN MI+ Y G +AL ++ M P +TF VL AC
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 425 LEKGKEIHNHI-----IESKLE--TNEIVMGALLDMYAKCGAVDEAFKVFNELP 471
+ +G + + + K+E TN ++D+ ++ G +DEA++ P
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTN------IIDLLSRAGMLDEAWEFMERFP 495
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 174/300 (58%), Gaps = 2/300 (0%)
Query: 275 AWNALIAGYSSR-GDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGY 333
++N +I G ++ D ++ + L+ RM G+KP T + V ++C++ ++ G+ +H
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 334 IIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKA 393
+ + ++ DV IN SLI +Y KCG+V A +F+++++ D V WN MISGY G A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 394 LAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDM 453
+ ++ M+E G +PD T S+L ACS L L G+ + I K+ + + L+ M
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 454 YAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITF 513
Y KCG +D A +VFN++ ++D V+WT+MI Y +G++ EA KLF EM+++ PD+ T
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 514 LALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTP 573
+LSAC G + E G SE ++Q + L+D+ G+ GR++EA + ++ P
Sbjct: 338 STVLSACGSVGAL-ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 206/410 (50%), Gaps = 10/410 (2%)
Query: 12 TCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLS 71
C + + G+ +H + +GL+ ++ + SLI +Y C YA +F I D
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI-TERDTV 199
Query: 72 LWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTH 131
WN +++ Y++ A++LF + + + +PD T S+L AC LG + G+++
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGF-EPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 132 LIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKA 191
I L + S MY KC + A ++F++M ++D +W +I+ Y Q+G++ +A
Sbjct: 259 AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEA 318
Query: 192 LELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDM 251
+LF +M +G P++ TL+TV+S+C + L+ GK+I + + Y+++ LVDM
Sbjct: 319 FKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDM 378
Query: 252 YGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTI 311
YGKCG +E A VFE +K+ WNA+I Y+ +G +K + LF RM+ + P+ T
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITF 435
Query: 312 SSVLMSCSRSGQLKHG-KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKM- 369
VL +C +G + G + H + + +++IDL + G + A E+
Sbjct: 436 IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Query: 370 SKTDVVYWNVMISGYVTVGDYF---KALAIYSDMKEVGAKPDAVTFTSVL 416
K D + ++ D KA+ + +MKE + V ++VL
Sbjct: 496 GKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL 545
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
T+L C +L+ GK I L LQ+NI + L+++Y C + A+ VF+ + P
Sbjct: 339 TVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM--P 396
Query: 68 L-DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
+ + + WN ++ +Y AL LFD + + P T+ VL AC
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSAC---------- 442
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDG 186
+H L+ G C F MF + + + + +I + G
Sbjct: 443 -VHAGLVHQG-----------------CRYFHEMSSMFGLVPK--IEHYTNIIDLLSRAG 482
Query: 187 QAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDL 223
++A E ++ G +P+ + L ++ +C + D+
Sbjct: 483 MLDEAWEFMERFPG---KPDEIMLAAILGACHKRKDV 516
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/680 (32%), Positives = 366/680 (53%), Gaps = 47/680 (6%)
Query: 11 RTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDL 70
+ C K + G+ +H VV GL++ + + SL ++Y C D A VF I + +
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 71 SLWNGLMASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIH 129
+ WN LM Y +N A+ LF DM Q ++P T + L A +G V GK H
Sbjct: 241 A-WNALMVGYVQNGKNEEAIRLFSDMRKQG--VEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 130 THLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAE 189
I G LD ++ +S Y K E A +FD M E+DV +WN +IS Y Q G E
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE 357
Query: 190 KALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALV 249
A+ + + MR + + VTL T++S+ AR +L GKE+ I+ F SD ++S ++
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 250 DMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLT 309
DMY KCG + A++VF+ TV K ++ WN L+A Y+ G S ++LF+ M EG+ P +
Sbjct: 418 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVI 477
Query: 310 TISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKM 369
T + +++S R+GQ V A+++F +M
Sbjct: 478 TWNLIILSLLRNGQ-----------------------------------VDEAKDMFLQM 502
Query: 370 SKT----DVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAAL 425
+ +++ W M++G V G +A+ M+E G +P+A + T L AC+ LA+L
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 426 EKGKEIHNHIIESKLETNEI-VMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAA 484
G+ IH +II + ++ + + +L+DMYAKCG +++A KVF +L +MI+A
Sbjct: 563 HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISA 622
Query: 485 YGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQP 544
Y +G EA+ L+ ++ +PD+IT +LSAC+HAG +++ F ++S+ +++P
Sbjct: 623 YALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKP 682
Query: 545 RNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKL 604
EHY ++DLL AG ++A +++ P + DA ++ +L ++C R E+ + +++
Sbjct: 683 CLEHYGLMVDLLASAGETEKALRLIEEMP-FKPDARMIQSLVASCNKQRKTELVDYLSRK 741
Query: 605 LIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIG--DRIQPF 662
L+E +P++S Y+ +SN YA WDEV K+R MK GL+K PGCSWI+I + + F
Sbjct: 742 LLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVF 801
Query: 663 FAEDKFYPQADMVYECLAIL 682
A DK + + + + LA+L
Sbjct: 802 VANDKTHTRINEIQMMLALL 821
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/566 (30%), Positives = 296/566 (52%), Gaps = 10/566 (1%)
Query: 77 MASYTKNYMYITALELF-DMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKT 135
++S KN AL L +M +N + P+ Y +L+ C + GK IH ++K
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPE--IYGEILQGCVYERDLSTGKQIHARILKN 99
Query: 136 G--FLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKALE 193
G + + I + YAKC++ E A +F ++ R+V SW +I + G E AL
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 194 LFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYG 253
F +M + P++ + V +C L G+ +H +K G +++S+L DMYG
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 254 KCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISS 313
KCG L+ A +VF++ ++ VAWNAL+ GY G ++ ++LF M ++G++PT T+S+
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 314 VLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTD 373
L + + G ++ GK H I N ++ D + +SL++ Y K G + AE VF++M + D
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 374 VVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHN 433
VV WN++ISGYV G A+ + M+ K D VT +++ A ++ L+ GKE+
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 434 HIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALE 493
+ I E++ ++ ++DMYAKCG++ +A KVF+ E+DL+ W +++AAY G + E
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 494 ALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLI 553
AL+LF MQ P+ IT+ ++ + G VDE F L + I P ++ ++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMM 518
Query: 554 DLLGRAGRLQEAYGILQSTPE--IREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPD 611
+ + + G +EA L+ E +R +A ++ SAC + +G I +I
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 612 DS--STYIVLSNMYASVKKWDEVRKI 635
S S L +MYA ++ K+
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 228/466 (48%), Gaps = 35/466 (7%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
T L ++EGK H + G++ + L SL+N Y +YA +VF +
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 68 LDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKM 127
D+ WN +++ Y + + A+ + L++ LK D T +++ A ++ +GK
Sbjct: 339 -DVVTWNLIISGYVQQGLVEDAIYMCQ-LMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 128 IHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQ 187
+ + I+ F D+V+AS+ MYAKC S A K+FD E+D+ WNT+++ Y + G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 188 AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSA 247
+ +AL LF M+ G PN +T +I S R +D K++ + G
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSG---------- 506
Query: 248 LVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPT 307
++ ++++W ++ G G S+ + +M E G++P
Sbjct: 507 ---------------------IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 308 LTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGD-VFINSSLIDLYFKCGRVSSAENVF 366
+I+ L +C+ L G+ +HGYIIRN V I +SL+D+Y KCG ++ AE VF
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF 605
Query: 367 EKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALE 426
+++ N MIS Y G+ +A+A+Y ++ VG KPD +T T+VL AC+ +
Sbjct: 606 GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
Query: 427 KGKEIHNHIIESK-LETNEIVMGALLDMYAKCGAVDEAFKVFNELP 471
+ EI I+ + ++ G ++D+ A G ++A ++ E+P
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/653 (32%), Positives = 358/653 (54%), Gaps = 50/653 (7%)
Query: 78 ASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGF 137
+SY +++ ++ +D + +P L S+L C L S+ ++IH +IK G
Sbjct: 13 SSYPFHFLPSSSDPPYDSIRNHPSL--------SLLHNCKTLQSL---RIIHAQMIKIGL 61
Query: 138 LLDVVIASSTAGMYAKCNSFEC---AVKMFDEMSERDVASWNTVISCYYQDGQAEKALEL 194
S FE A+ +F + E ++ WNT+ + AL+L
Sbjct: 62 HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKL 121
Query: 195 FKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGK 254
+ M G PNS T V+ SCA+ G++IH +K G D Y+ ++L+ MY +
Sbjct: 122 YVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ 181
Query: 255 CGCLEMAREVFEQTV-------------------------------LKSVVAWNALIAGY 283
G LE A +VF+++ +K VV+WNA+I+GY
Sbjct: 182 NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 284 SSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDV 343
+ G+ K ++LF M + ++P +T+ +V+ +C++SG ++ G+ +H +I + ++
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 344 FINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEV 403
I ++LIDLY KCG + +A +FE++ DV+ WN +I GY + Y +AL ++ +M
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 404 GAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLE--TN-EIVMGALLDMYAKCGAV 460
G P+ VT S+LPAC+ L A++ G+ IH +I + +L+ TN + +L+DMYAKCG +
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYI-DKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 461 DEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSAC 520
+ A +VFN + + L SW +MI + HGRA + LF M++ +PD ITF+ LLSAC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC 480
Query: 521 SHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAG 580
SH+G +D G + F M +Y + P+ EHY C+IDLLG +G L + + + E+ D
Sbjct: 481 SHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG-LFKEAEEMINMMEMEPDGV 539
Query: 581 LLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMK 640
+ +L AC++H ++E+GE A+ LI+ +P++ +Y++LSN+YAS +W+EV K R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 641 ELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYECLAILAGHMEKDELLP 693
+ G++K PGCS IEI + F DKF+P+ +Y L + +EK +P
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVP 652
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 288/597 (48%), Gaps = 82/597 (13%)
Query: 7 LTLLRTCTGSKSLKEGKIIHQKVVTLGLQN-NIALCKSLINLYFSCQNYD---YAMLVFK 62
L+LL C K+L+ +IIH +++ +GL N N AL K LI +++ YA+ VFK
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSK-LIEFCILSPHFEGLPYAISVFK 92
Query: 63 TIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSV 122
TI P +L +WN + + + ++AL+L+ ++ L P+SYT+P VLK+C +
Sbjct: 93 TIQEP-NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAF 150
Query: 123 GIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFE------------------------ 158
G+ IH H++K G LD+ + +S MY + E
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 159 -------CAVKMFDEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLT 211
A K+FDE+ +DV SWN +IS Y + G ++ALELFK M + +P+ T+
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 212 TVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLK 271
TV+S+CA+ ++ G+++H GF S+ I +AL+D+Y KCG LE A +FE+ K
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 272 SVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMH 331
V++WN LI GY+ K + LF M G P T+ S+L +C+ G + G+ +H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 332 GYIIRN--KIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGD 389
YI + + + +SLID+Y KCG + +A VF + + WN MI G+ G
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 390 YFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVM-G 448
+ ++S M+++G +PD +TF +L ACS L+ G+ I + + T ++ G
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 449 ALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARP 508
++D+ G FK E + P
Sbjct: 511 CMIDLLGHSG----LFKEAEE------------------------------MINMMEMEP 536
Query: 509 DSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNE-HYSCLIDLLGRAGRLQE 564
D + + +LL AC G V+ G + +I I+P N Y L ++ AGR E
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLI---KIEPENPGSYVLLSNIYASAGRWNE 590
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/682 (31%), Positives = 364/682 (53%), Gaps = 11/682 (1%)
Query: 9 LLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPL 68
L +T S S+ GK+ H ++ L + L +L+N+Y C+ +A +F +
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 69 DLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMI 128
+S +N L++ YT+ Y A+ELF + + LK D +TY L CG + +G+++
Sbjct: 113 IIS-FNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFTYAGALGFCGERCDLDLGELL 170
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
H ++ G V + + MY+KC + A+ +FD ERD SWN++IS Y + G A
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMD---LDRGKEIHKEFIKDGFVSDSYIS 245
E+ L L KM G + L +V+ +C ++ +++G IH K G D +
Sbjct: 231 EEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR 290
Query: 246 SALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGD-----SKSCVKLFWRMN 300
+AL+DMY K G L+ A ++F K+VV +NA+I+G+ + S KLF M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 301 EEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVS 360
G++P+ +T S VL +CS + L++G+ +H I +N Q D FI S+LI+LY G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 361 SAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACS 420
F SK D+ W MI +V A ++ + +P+ T + ++ AC+
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 421 QLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTS 480
AAL G++I + I+S ++ V + + MYAK G + A +VF E+ D+ ++++
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 481 MIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEY 540
MI++ HG A EAL +F M+ +P+ FL +L AC H G V +G YF M ++Y
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 541 NIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEK 600
I P +H++CL+DLLGR GRL +A ++ S+ ++ L S+CR+++D +G++
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSG-FQDHPVTWRALLSSCRVYKDSVIGKR 649
Query: 601 IAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQ 660
+A+ L+E +P+ S +Y++L N+Y ++R M++ G++K P SWI IG++
Sbjct: 650 VAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTH 709
Query: 661 PFFAEDKFYPQADMVYECLAIL 682
F D +P + M+Y L +
Sbjct: 710 SFAVADLSHPSSQMIYTMLETM 731
Score = 245 bits (626), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 236/433 (54%), Gaps = 8/433 (1%)
Query: 105 DSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMF 164
DS Y + + GSV +GK+ H H+IK+ + + ++ MY KC A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 165 DEMSERDVASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLD 224
D M ER++ S+N++IS Y Q G E+A+ELF + R + + + T + C DLD
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 225 RGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYS 284
G+ +H + +G ++ + L+DMY KCG L+ A +F++ + V+WN+LI+GY
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 285 SRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCS---RSGQLKHGKVMHGYIIRNKIQG 341
G ++ + L +M+ +G+ T + SVL +C G ++ G +H Y + ++
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 342 DVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYF-----KALAI 396
D+ + ++L+D+Y K G + A +F M +VV +N MISG++ + + +A +
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 397 YSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAK 456
+ DM+ G +P TF+ VL ACS LE G++IH I ++ +++E + AL+++YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 457 CGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLAL 516
G+ ++ + F ++D+ SWTSMI + + + A LF ++ S+ RP+ T +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 517 LSACSHAGWVDEG 529
+SAC+ + G
Sbjct: 466 MSACADFAALSSG 478
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/687 (33%), Positives = 375/687 (54%), Gaps = 22/687 (3%)
Query: 23 KIIHQKVVTL---GLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMAS 79
+++ Q + T+ GL ++ + L++ + + YA VF ++ ++L NGLM
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL-NGLMVG 283
Query: 80 YTKNYMYITALELFDMLLQNPYLKPDSY-----TYPSVLKACGGLGSVGI--GKMIHTHL 132
+ A +LF + + P+SY ++P A VG+ G+ +H H+
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLA----EEVGLKKGREVHGHV 339
Query: 133 IKTGFL-LDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQAEKA 191
I TG + V I + MYAKC S A ++F M+++D SWN++I+ Q+G +A
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 192 LELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSALVDM 251
+E +K MR P S TL + +SSCA L G++IH E +K G + +S+AL+ +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 252 YGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDS-KSCVKLFWRMNEEGIKPTLTT 310
Y + G L R++F V+WN++I + S V F G K T
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRIT 519
Query: 311 ISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS 370
SSVL + S + GK +HG ++N I + ++LI Y KCG + E +F +M+
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 371 -KTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGK 429
+ D V WN MISGY+ KAL + M + G + D+ + +VL A + +A LE+G
Sbjct: 580 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 639
Query: 430 EIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHG 489
E+H + + LE++ +V AL+DMY+KCG +D A + FN +P R+ SW SMI+ Y HG
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 490 RALEALKLFGEMQ-QSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEH 548
+ EALKLF M+ PD +TF+ +LSACSHAG ++EG +F M Y + PR EH
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH 759
Query: 549 YSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSA-CRLH-RDIEMGEKIAKLLI 606
+SC+ D+LGRAG L + ++ P ++ + + T+ A CR + R E+G+K A++L
Sbjct: 760 FSCMADVLGRAGELDKLEDFIEKMP-MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 818
Query: 607 EKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAED 666
+ +P+++ Y++L NMYA+ +W+++ K R KMK+ ++K G SW+ + D + F A D
Sbjct: 819 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 878
Query: 667 KFYPQADMVYECLAILAGHMEKDELLP 693
K +P AD++Y+ L L M +P
Sbjct: 879 KSHPDADVIYKKLKELNRKMRDAGYVP 905
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 289/585 (49%), Gaps = 20/585 (3%)
Query: 7 LTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDN 66
L+ +++C G + + H ++ L ++ LC +LIN Y + A VF +
Sbjct: 7 LSFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM-- 62
Query: 67 PL-DLSLWNGLMASYTKNYMYITALE-LFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGI 124
PL + W +++ Y++N + AL L DM+ + + + Y + SVL+AC +GSVGI
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF--SNQYAFVSVLRACQEIGSVGI 120
Query: 125 --GKMIHTHLIKTGFLLDVVIASSTAGMYAKC-NSFECAVKMFDEMSERDVASWNTVISC 181
G+ IH + K + +D V+++ MY KC S A+ F ++ ++ SWN++IS
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 182 YYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRG--KEIHKEFIKDGFV 239
Y Q G A +F M+ G +P T +++++ L + D ++I K G +
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 240 SDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRM 299
+D ++ S LV + K G L AR+VF Q ++ V N L+ G + + KLF M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 300 NEE-GIKPTLTTI---SSVLMSCSRSGQLKHGKVMHGYIIRNK-IQGDVFINSSLIDLYF 354
N + P I S S + LK G+ +HG++I + V I + L+++Y
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 355 KCGRVSSAENVFEKMSKTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTS 414
KCG ++ A VF M+ D V WN MI+G G + +A+ Y M+ P + T S
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 415 VLPACSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERD 474
L +C+ L + G++IH ++ ++ N V AL+ +YA+ G ++E K+F+ +PE D
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 475 LVSWTSMIAAYGSHGRAL-EALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYF 533
VSW S+I A R+L EA+ F Q++ + + ITF ++LSA S + + G
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 534 NLMISEYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIRED 578
L + NI + LI G+ G + I E R++
Sbjct: 541 GLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 187/384 (48%), Gaps = 13/384 (3%)
Query: 6 ILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTID 65
+++ L +C K K G+ IH + + LG+ N+++ +L+ LY + +F ++
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 66 NPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIG 125
+S WN ++ + ++ + + + Q K + T+ SVL A L +G
Sbjct: 478 EHDQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 126 KMIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSE-RDVASWNTVISCYYQ 184
K IH +K + ++ Y KC + K+F M+E RD +WN++IS Y
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 185 DGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYI 244
+ KAL+L M +G + +S TV+S+ A + L+RG E+H ++ SD +
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 245 SSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEG- 303
SALVDMY KCG L+ A F +++ +WN++I+GY+ G + +KLF M +G
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 304 IKPTLTTISSVLMSCSRSGQLKHG-----KVMHGYIIRNKIQGDVFINSSLIDLYFKCGR 358
P T VL +CS +G L+ G + Y + +I+ S + D+ + G
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH----FSCMADVLGRAGE 772
Query: 359 VSSAENVFEKMS-KTDVVYWNVMI 381
+ E+ EKM K +V+ W ++
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 35/245 (14%)
Query: 8 TLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNP 67
T+L +L+ G +H V L++++ + +L+++Y C DYA+ F T+ P
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--P 681
Query: 68 LDLSL-WNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGK 126
+ S WN +++ Y ++ AL+LF+ + + PD T+ VL AC
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--------- 732
Query: 127 MIHTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERD--------------V 172
H L++ GF S + G+ + F C + E D V
Sbjct: 733 --HAGLLEEGF-KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 173 ASWNTVI-SCYYQDGQ----AEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGK 227
W TV+ +C +G+ +KA E+ ++ N V L + ++ R DL + +
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN-AVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 228 EIHKE 232
+ K+
Sbjct: 849 KKMKD 853
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/676 (31%), Positives = 340/676 (50%), Gaps = 107/676 (15%)
Query: 124 IGKMIHTHLIKTGF-LLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCY 182
+G IH LIK G D + S++ G Y +C S A K+FDEM +RD +WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 183 YQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDS 242
+ G EKA+ELF++M+ SG + T+ ++ C+ G++IH ++ G S+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 243 YISSALVDMYGKCGCLEMAREVFE----------QTVLKS-------------------- 272
+ ++L+ MY + G LE++R+VF ++L S
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 273 -----VVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHG 327
+V WN+L++GY+S+G SK + + RM G+KP+ ++ISS+L + + G LK G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 328 KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS----------------- 370
K +HGYI+RN++ DV++ ++LID+Y K G + A VF+ M
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 371 ------------------KTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTF 412
K D + WN + SGY T+G KAL + MKE G P+ V++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 413 TSVLPACSQ-----------------------------------LAALEKGKEIHNHIIE 437
T++ CS+ L+ L GKE+H +
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 438 SKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSWTSMIAAYGSHGRALEALKL 497
L + V AL+DMY K G + A ++F + + L SW M+ Y GR E +
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAA 484
Query: 498 FGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMISEYNIQPRNEHYSCLIDLLG 557
F M ++ PD+ITF ++LS C ++G V EG YF+LM S Y I P EH SC++DLLG
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG 544
Query: 558 RAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMGEKIAKLLIEKDPDDSSTYI 617
R+G L EA+ +Q T ++ DA + S+C++HRD+E+ E K L +P +S+ Y+
Sbjct: 545 RSGYLDEAWDFIQ-TMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 603
Query: 618 VLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKFYPQADMVYE 677
++ N+Y+++ +W++V +IR M+ +R SWI+I + F+AE K +P +Y
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF 663
Query: 678 CLAILAGHMEKDELLP 693
L L M+K +P
Sbjct: 664 ELYKLVSEMKKSGYVP 679
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 211/485 (43%), Gaps = 107/485 (22%)
Query: 4 TRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKT 63
+ ++ LL+ C+ + EG+ IH V+ LGL++N+++C SLI +Y + + VF +
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 64 IDNPLDLSLWNGLMASYTKNYMYITALELFDML--------------------------- 96
+ + +LS WN +++SYTK A+ L D +
Sbjct: 150 MKDR-NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 97 -------LQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIASSTAG 149
+Q LKP + + S+L+A G + +GK IH ++++ DV + ++
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 150 MYAKCNSFECAVKMFDEMSERDVASWNTVIS-----CYYQD------------------- 185
MY K A +FD M +++ +WN+++S C +D
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 186 -----------GQAEKALELFKKMRGSGFQPNSVTLTTVISSCAR--------------- 219
G+ EKAL++ KM+ G PN V+ T + S C++
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 220 --------------------LMDLDRGKEIHKEFIKDGFVSDSYISSALVDMYGKCGCLE 259
L L GKE+H ++ + D+Y+++ALVDMYGK G L+
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 260 MAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCS 319
A E+F KS+ +WN ++ GY+ G + + F M E G++P T +SVL C
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 320 RSGQLKHG-KVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMS-KTDVVYW 377
SG ++ G K R I + S ++DL + G + A + + MS K D W
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 378 NVMIS 382
+S
Sbjct: 569 GAFLS 573
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 2 NITRILTLLRTCTGSKSLKEGKIIHQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVF 61
N + TLL+ L GK +H + L + + +L+++Y + A+ +F
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
Query: 62 KTIDNPLDLSLWNGLMASYTKNYMYITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGS 121
I N L+ WN ++ Y + F ++L+ ++PD+ T+ SVL C G
Sbjct: 455 WGIKNK-SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG-MEPDAITFTSVLSVCKNSGL 512
Query: 122 VGIG 125
V G
Sbjct: 513 VQEG 516
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/636 (32%), Positives = 328/636 (51%), Gaps = 71/636 (11%)
Query: 129 HTHLIKTGFLLDVVIASSTAGMYAKCNSFECAVKMFDEMSERDVASWNTVISCYYQDGQA 188
H ++K+G D I++ Y+ N F A + + + + S++++I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 189 EKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIHKEFIKDGFVSDSYISSAL 248
+++ +F +M G P+S L + CA L GK+IH G D+++ ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 249 VDMYGKCGCLEMAREVFEQTVLKSVV---------------------------------- 274
MY +CG + AR+VF++ K VV
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 275 -AWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGY 333
+WN +++G++ G K V +F +++ G P T+SSVL S S L G+++HGY
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 334 IIRNKIQGDVFINSSLIDLYFKCGRVS---SAENVFEKMS-------------------- 370
+I+ + D + S++ID+Y K G V S N FE M
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 371 ------------KTDVVYWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPA 418
+ +VV W +I+G G +AL ++ +M+ G KP+ VT S+LPA
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 419 CSQLAALEKGKEIHNHIIESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELPERDLVSW 478
C +AAL G+ H + L N V AL+DMYAKCG ++ + VFN +P ++LV W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 479 TSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALLSACSHAGWVDEGGYYFNLMIS 538
S++ + HG+A E + +F + ++ +PD I+F +LLSAC G DEG YF +M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 539 EYNIQPRNEHYSCLIDLLGRAGRLQEAYGILQSTPEIREDAGLLSTLFSACRLHRDIEMG 598
EY I+PR EHYSC+++LLGRAG+LQEAY +++ P D+ + L ++CRL ++++
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP-FEPDSCVWGALLNSCRLQNNVDLA 576
Query: 599 EKIAKLLIEKDPDDSSTYIVLSNMYASVKKWDEVRKIRLKMKELGLRKNPGCSWIEIGDR 658
E A+ L +P++ TY++LSN+YA+ W EV IR KM+ LGL+KNPGCSWI++ +R
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 659 IQPFFAEDKFYPQADMVYECLAILAGHMEKDELLPS 694
+ A DK +PQ D + E + ++ M K P+
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPN 672
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 256/533 (48%), Gaps = 82/533 (15%)
Query: 26 HQKVVTLGLQNNIALCKSLINLYFSCQNYDYAMLVFKTIDNPLDLSLWNGLMASYTKNYM 85
H +++ G QN+ + LI Y + ++ A LV ++I +P S ++ L+ + TK +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYS-FSSLIYALTKAKL 96
Query: 86 YITALELFDMLLQNPYLKPDSYTYPSVLKACGGLGSVGIGKMIHTHLIKTGFLLDVVIAS 145
+ ++ +F + + L PDS+ P++ K C L + +GK IH +G +D +
Sbjct: 97 FTQSIGVFSRMFSHG-LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 146 STAGMYAKCNSFECAVKMFDEMSERDV--------------------------------- 172
S MY +C A K+FD MS++DV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 173 --ASWNTVISCYYQDGQAEKALELFKKMRGSGFQPNSVTLTTVISSCARLMDLDRGKEIH 230
SWN ++S + + G ++A+ +F+K+ GF P+ VT+++V+ S L+ G+ IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 231 KEFIKDGFVSDSYISSALVDMYGKCG---------------------------------- 256
IK G + D + SA++DMYGK G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 257 -CLEMAREVFEQTVLKSVVAWNALIAGYSSRGDSKSCVKLFWRMNEEGIKPTLTTISSVL 315
LEM EQT+ +VV+W ++IAG + G ++LF M G+KP TI S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 316 MSCSRSGQLKHGKVMHGYIIRNKIQGDVFINSSLIDLYFKCGRVSSAENVFEKMSKTDVV 375
+C L HG+ HG+ +R + +V + S+LID+Y KCGR++ ++ VF M ++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 376 YWNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIHNHI 435
WN +++G+ G + ++I+ + KPD ++FTS+L AC Q+ ++G + +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 436 -----IESKLETNEIVMGALLDMYAKCGAVDEAFKVFNELP-ERDLVSWTSMI 482
I+ +LE ++++ + G + EA+ + E+P E D W +++
Sbjct: 516 SEEYGIKPRLEH----YSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 181/417 (43%), Gaps = 73/417 (17%)
Query: 228 EIHKEFIKDGFVSDSYISSALVDMYGKCGCLEMAREVFEQTVLKSVVAWNALIAGYSSRG 287
+ H +K G +D YIS+ L+ Y C A V + ++ ++++LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 288 DSKSCVKLFWRMNEEGIKPTLTTISSVLMSCSRSGQLKHGKVMHGYIIRNKIQGDVFINS 347
+ +F RM G+ P + ++ C+ K GK +H + + D F+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 348 SLIDLYFKCGRVSSAENVFEKMSKTDVVY------------------------------- 376
S+ +Y +CGR+ A VF++MS DVV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 377 ----WNVMISGYVTVGDYFKALAIYSDMKEVGAKPDAVTFTSVLPACSQLAALEKGKEIH 432
WN ++SG+ G + +A+ ++ + +G PD VT +SVLP+ L G+ IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 433 NHIIESKLETNEIVMGALLDMYAKCGA-------------------------------VD 461
++I+ L ++ V+ A++DMY K G VD
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 462 EAFKVFNELPER----DLVSWTSMIAAYGSHGRALEALKLFGEMQQSNARPDSITFLALL 517
+A ++F E+ ++VSWTS+IA +G+ +EAL+LF EMQ + +P+ +T ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 518 SACSHAGWVDEGGYYFNLMISEYNIQPRNEHY-SCLIDLLGRAGRLQEAYGILQSTP 573
AC + + G + + + N H S LID+ + GR+ + + P
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLD--NVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,463,256
Number of Sequences: 539616
Number of extensions: 10244726
Number of successful extensions: 34083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 22884
Number of HSP's gapped (non-prelim): 2597
length of query: 694
length of database: 191,569,459
effective HSP length: 125
effective length of query: 569
effective length of database: 124,117,459
effective search space: 70622834171
effective search space used: 70622834171
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)