BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005491
(694 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/701 (77%), Positives = 601/701 (85%), Gaps = 19/701 (2%)
Query: 2 ANRLGSLSQPSSNS---DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE 58
ANR+GS SQ +S DDLY ELWKACAGPLVDVPK G+RV+YFPQGHMEQLEASTNQE
Sbjct: 3 ANRVGSFSQGNSEGSCGDDLYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQE 62
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPR 117
LNQR+PLF LPSKILCRV+NIHL+AEQ+TDEVYAQITLLPE Q EPT+PDP PA+ S R
Sbjct: 63 LNQRVPLFNLPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEPSRR 122
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P VHSF KVLTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVAKDLHGYEWRFKH
Sbjct: 123 PAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKH 182
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQQSSMPSSVIS
Sbjct: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVIS 242
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
SQSMHLGVLATASHAVATQT+FVVYYKPR TSQFIISLNKYLEA+NNKF+VGMR+KM
Sbjct: 243 SQSMHLGVLATASHAVATQTLFVVYYKPR----TSQFIISLNKYLEAINNKFSVGMRFKM 298
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
RFEGEDSPERRFSGT+VGVEDFSPHW DSKWR LKVQWDEPASI RPD+VSPWEIEPF A
Sbjct: 299 RFEGEDSPERRFSGTIVGVEDFSPHWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSA 358
Query: 358 SATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDN 417
SA N+ QPV KNKRPR +EVP LDL S AS W++RL QSH+LTQLSVTAE KR +N
Sbjct: 359 SAPSNISQPVPLKNKRPRPPIEVPTLDLSSTASPLWNSRLTQSHDLTQLSVTAEGKRNEN 418
Query: 418 HVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHS 477
H+ WHHK +D +S+SN +SRTQ++G WL+SP V SQ LFQE +D+K++S WP SG+S
Sbjct: 419 HIMWHHKQNDINSHSNSISRTQTEGGWLSSPLVNVSQHLFQEVTEDSKSVSNWPVVSGYS 478
Query: 478 TPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP-----VSSLTT 532
TP SK ND++L+ VE GRK++ TS RLFGIELINH+ SS P+EK P VSS TT
Sbjct: 479 TPQSSK-LNDSILDPVEKGRKSDVATSYRLFGIELINHSASSLPTEKAPAQPLSVSSGTT 537
Query: 533 EGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 592
E H++ST+S AADSD KSDI+ KE+K EQ+ VSPK++QS+QS S RSRTKVQMQGV
Sbjct: 538 EAHVVSTLS-AADSDQKSDIS---KERKPEQLHVSPKDAQSRQSS-ASTRSRTKVQMQGV 592
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
AVGRA+DLT + GY+ L+DELEEMFDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFC
Sbjct: 593 AVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFC 652
Query: 653 NMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
NMV+RIFICSSQDVKKM PGSKLPMFS EGE ++SSDSA+
Sbjct: 653 NMVRRIFICSSQDVKKMMPGSKLPMFSTEGEGTVISSDSAD 693
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/685 (72%), Positives = 562/685 (82%), Gaps = 20/685 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVP++G+RV+YFPQGH+EQLEASTNQEL+QRIPLF LPSKILCR
Sbjct: 10 DDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCR 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I L AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTH
Sbjct: 70 VIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 130 GGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVAT
Sbjct: 190 VTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVAT 249
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
QT+F+VYYKP RTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG
Sbjct: 250 QTLFIVYYKP----RTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVG 305
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
EDFSP WKDS+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR
Sbjct: 306 GEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPR 365
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD-----FSS 430
+ P +AASA W L QSH+LTQ+S TAE KR +NHV WHHK +D +S
Sbjct: 366 SNESPVPETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGPLINS 425
Query: 431 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 490
N+ +SRTQ++G WL+S V SQ FQ+A +D+K++SAWPA SG+ST H SK +DT++
Sbjct: 426 NTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTII 485
Query: 491 EQVETGRK--TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 548
+ G+K E TSCRLFG EL+NH +SS P K GH IS +S+ DSD
Sbjct: 486 DPNGNGKKAVAEMATSCRLFGFELMNH-SSSPPVGKA-------HGHSIS-VSSGTDSDQ 536
Query: 549 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 608
KSD++K KE+KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+AVGRA+DLT L GYD
Sbjct: 537 KSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALEGYDE 596
Query: 609 LIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
LIDELEEMF+IKG+L R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKK
Sbjct: 597 LIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKK 656
Query: 669 MSPGSKLPMFSIEGEDILLSSDSAE 693
MSPGSKLP+ S+EGE +S DS E
Sbjct: 657 MSPGSKLPISSMEGEGTTISLDSTE 681
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/700 (71%), Positives = 565/700 (80%), Gaps = 39/700 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVP++G+RV+YFPQGH+EQLEASTNQEL+QRIPLF LPSKILCR
Sbjct: 10 DDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCR 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I L AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTH
Sbjct: 70 VIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 130 GGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVAT
Sbjct: 190 VTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVAT 249
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
QT+F+VYYKP RTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG
Sbjct: 250 QTLFIVYYKP----RTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVG 305
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
EDFSP WKDS+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR
Sbjct: 306 GEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPR 365
Query: 376 LSMEVPPLDLP---------------SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVA 420
S E P +P +AASA W L QSH+LTQ+S TAE KR +NHV
Sbjct: 366 -SNESP---VPGQGKFLHRFCFETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVM 421
Query: 421 WHHKHSD-----FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSG 475
WHHK +D +SN+ +SRTQ++G WL+S V SQ FQ+A +D+K++SAWPA SG
Sbjct: 422 WHHKQADIGGPLINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSG 481
Query: 476 HSTPHPSKPNNDTLLEQVETGRK--TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTE 533
+ST H SK +DT+++ G+K E TSCRLFG EL+NH +SS P K
Sbjct: 482 YSTLHSSKLTSDTIIDPNGNGKKAVAEMATSCRLFGFELMNH-SSSPPVGKA-------H 533
Query: 534 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVA 593
GH IS +S+ DSD KSD++K KE+KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+A
Sbjct: 534 GHSIS-VSSGTDSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIA 592
Query: 594 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCN 653
VGRA+DLT L GYD LIDELEEMF+IKG+L R KWEIV+TDDEGDMMLVGDDPW EFCN
Sbjct: 593 VGRAVDLTALEGYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCN 652
Query: 654 MVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
MV+RIFICSSQDVKKMSPGSKLP+ S+EGE +S DS E
Sbjct: 653 MVRRIFICSSQDVKKMSPGSKLPISSMEGEGTTISLDSTE 692
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/692 (70%), Positives = 553/692 (79%), Gaps = 28/692 (4%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D++Y LWK CAGPLVDVP+ GQRV+YFPQGHMEQLEASTNQELNQRIPL +LP+KI
Sbjct: 16 SGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKI 75
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRVVN+HL+AEQETDEVYAQITL+PE +Q+EP PDPC A+ PR VHSFSKVLTASDT
Sbjct: 76 LCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMNPDPCTAEPPRAPVHSFSKVLTASDT 135
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLRKHA ECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW
Sbjct: 136 STHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 195
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHA
Sbjct: 196 STFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHA 255
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFS 310
VATQT+FVVYYKP RTSQFIIS+NKYLEA+ N+F+VGMR KMRFEG+DS E +RFS
Sbjct: 256 VATQTLFVVYYKP----RTSQFIISVNKYLEAM-NRFSVGMRLKMRFEGDDSAETDKRFS 310
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
GT+VGVED SPHW +SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K
Sbjct: 311 GTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVK 370
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
KRPR E P +D SAAS W A L Q+ ++ Q +V AE KR D+ WHH +D +S
Sbjct: 371 TKRPRPPSETPDVDTTSAASVFWDAGLQQA-DMAQKNVLAESKRNDSTGTWHHMQTDMNS 429
Query: 431 NS---NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
S N M R Q++G WL+SP LFQ+A DD+K++SAWP S PH S+ NND
Sbjct: 430 KSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKSVSAWPV----SKPHSSRLNND 485
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS-----LTTEGHIISTISA 542
+L+QV+ K ET TS RLFGI+LI+H+ +S EK + +TTEG ST++
Sbjct: 486 HVLDQVDKESKVETATSYRLFGIDLIDHSRNSPSVEKASAQAGNAPKVTTEG-CTSTLT- 543
Query: 543 AADSDGKSDI-AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
D+ SD+ KE+KQEQ QVSPKE+QSKQ C RSRTKVQMQGVAVGRA+DLT
Sbjct: 544 RTDAGHLSDVPMASSKERKQEQQQVSPKETQSKQIC----RSRTKVQMQGVAVGRAVDLT 599
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
L GYD LI+ELEEMFDIKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFIC
Sbjct: 600 MLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFIC 659
Query: 662 SSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
SSQDVKKMS GSKLP+ S+E + ++SSD+ E
Sbjct: 660 SSQDVKKMSCGSKLPISSVE-DGTVISSDTTE 690
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/692 (69%), Positives = 552/692 (79%), Gaps = 27/692 (3%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D+LY + WKACAGPLVDVP+ GQRV+YFPQGHMEQLEASTNQELNQRIPL +LP+KI
Sbjct: 16 SGEDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKI 75
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRVVN+HL+AEQETDEVYAQITL+PE SQ+EPT DPC A+ PR VHSFSKVLTASDT
Sbjct: 76 LCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTNADPCTAEPPRAPVHSFSKVLTASDT 135
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLRKHATECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW
Sbjct: 136 STHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 195
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHA
Sbjct: 196 STFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHA 255
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFS 310
VATQT+FVVYYKP RTSQFII +NKYLEA++ KF+VGMR+KMRFEG+DS E +RFS
Sbjct: 256 VATQTLFVVYYKP----RTSQFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFS 311
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
GT+VGVED SPHW +SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K
Sbjct: 312 GTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVK 371
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
KRPR E P +D S AS W A L Q+ ++ Q +V AE K DN WHH +D +S
Sbjct: 372 TKRPRPPSETPDVDTTSVASVFWDAGLQQA-DMAQKNVLAESKWNDNTGTWHHMQTDMNS 430
Query: 431 NS---NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
S N M R Q++G WL+SP LFQ+ DD+K +SAWP S PH SK NND
Sbjct: 431 KSNSGNTMLRNQTEGSWLSSPHSSCPSHLFQDVTDDSKIVSAWPV----SKPHSSKLNND 486
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISA 542
+L+QV+ K ET TS RLFGI+LI+ + +S EK V V +TTEG ST+S
Sbjct: 487 HVLDQVDKESKVETATSYRLFGIDLIDPSRNSPSVEKASAQAVNVPKVTTEG-CTSTLS- 544
Query: 543 AADSDGKSDIA-KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
D+ KSD++ E+KQEQ+QVSPK++QSKQ C RSRTKVQMQGVAVGRA+DLT
Sbjct: 545 RTDAGHKSDVSMASSMERKQEQLQVSPKDTQSKQIC----RSRTKVQMQGVAVGRAVDLT 600
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
L GY LI+ELE+MF+IKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFIC
Sbjct: 601 MLDGYGQLINELEDMFNIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFIC 660
Query: 662 SSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
SSQDVKKMS GSKLP+ S+E + ++SSD+ E
Sbjct: 661 SSQDVKKMSCGSKLPISSVE-DGTVISSDTTE 691
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/681 (68%), Positives = 535/681 (78%), Gaps = 40/681 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELWKA AGPLVDVP GQ V+YFPQGHMEQLEASTNQELNQRIP+ +LP+KILCR+VNIH
Sbjct: 19 ELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKILCRIVNIH 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L+AEQETDEVYAQITL+PE +QNEPT PDP + PRPK+HSF K+LTASDTSTHGGFSV
Sbjct: 79 LLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELPRPKIHSFCKILTASDTSTHGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
LRKHATECLPPLDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 139 LRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVAGDTFVFL GENGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHAVATQT+FV
Sbjct: 199 LVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLFV 257
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVED 318
VYYKP RTSQFI+S+NKYL AV+NKFAVGMR++MRFE +DS E +RFSGT+VGVED
Sbjct: 258 VYYKP----RTSQFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAESDKRFSGTIVGVED 313
Query: 319 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 378
SPHW +SKWRSLKVQWDEP++ITRPDRVSPWEIEPFV+SA+ VQP AK KRPR +
Sbjct: 314 ISPHWANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTKRPRPTS 373
Query: 379 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 438
E+P +D SAAS W AR++Q+ ++TQ RI N +N+N R
Sbjct: 374 EIPDVDTTSAASIFWDARMSQT-DMTQ--------RIMNS----------KTNNNATLRN 414
Query: 439 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 498
Q++G WL+SPR + L + DD K++SAWP S P S N D +L+QVE K
Sbjct: 415 QTEGSWLSSPRSSYPSHLLHDTTDDGKSVSAWPV----SQPQSSILNIDRMLDQVEKDNK 470
Query: 499 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG-----KSDIA 553
ET T+ RLFGI+LI+H+ SA E +P SS G+ ++T +++ KSDI+
Sbjct: 471 VETATTYRLFGIDLIDHSKKSAAVE-IP-SSHAVNGNGVTTEVSSSTLSSSDTARKSDIS 528
Query: 554 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
K E+KQE QVSPKE+QSKQ C +RSRTKVQMQGVAVGRA+DL TL GYD LI EL
Sbjct: 529 KASFERKQEPQQVSPKETQSKQIC---SRSRTKVQMQGVAVGRAVDLATLNGYDQLIGEL 585
Query: 614 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
EE+FDIKGQL R WEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKM GS
Sbjct: 586 EELFDIKGQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMKSGS 645
Query: 674 KLPMFSIEGEDILLSSDSAEK 694
KLP+ S E ++SSD+ E+
Sbjct: 646 KLPISSSIEEGTVISSDTTER 666
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/682 (67%), Positives = 533/682 (78%), Gaps = 35/682 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+LY +LWKACAGP V+VP+ GQRV+YFPQGHMEQLE STNQELNQRIPLF+L SKILCR
Sbjct: 13 DELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLSSKILCR 72
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+HL+AEQETDEVYAQITL+PE +Q EPT+PDPCPA+ PRP+VHSF KVLTASDTSTH
Sbjct: 73 VVNVHLLAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPRVHSFCKVLTASDTSTH 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM++STPTQELVAKDL G+EWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 133 GGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLTTGWSTF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVAT
Sbjct: 193 VTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLATASHAVAT 252
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTV 313
QT+FVVYYKP RTSQFI+S+NKYLEA+N K VGMR+KMRFEG++SPE +RFSGT+
Sbjct: 253 QTLFVVYYKP----RTSQFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPENDKRFSGTI 308
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
+GVED SPHW +S WRSLKVQWDEPAS RPDRVS WEIE +A QP + KNKR
Sbjct: 309 LGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQPAVIKNKR 368
Query: 374 PRLSMEVPPL-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
PR + EVP L D P AA W A L Q ++TQL V E KR D+ + H +H + SN+
Sbjct: 369 PRQASEVPDLGDTPLAAPTFWDAGLTQC-DMTQLRVMTESKRSDS--SSHMRHHNSKSNN 425
Query: 433 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ 492
N +S Q++ WL+SP QL+Q+ DDNK+I AWP S PH + NND L+Q
Sbjct: 426 NGISMNQTEASWLSSP------QLYQDTTDDNKSILAWPI----SKPHSERLNNDHFLDQ 475
Query: 493 VETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
V+ K E TS RLFGI+LI+HA + +SL+ E D + +SD
Sbjct: 476 VDKNINKVEAATSYRLFGIDLIDHARN---------NSLSVENASGVASECKTDVNHESD 526
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
++K KE QEQ+ VSPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+D
Sbjct: 527 LSKASKEWNQEQLLVSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVD 583
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
ELE+MFDIKGQL R KWE V+TDDEGDMMLVGDDPW EFCNMVKRIFICSSQDV K+S
Sbjct: 584 ELEKMFDIKGQLQHRNKWETVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVHKLSS 643
Query: 672 GSKLPMFSIEGEDILLSSDSAE 693
GSKLP+ S+ GE I++S ++ E
Sbjct: 644 GSKLPISSM-GE-IVISLNTTE 663
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/683 (67%), Positives = 531/683 (77%), Gaps = 36/683 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+LY +LWKACAGP V+VP+ GQRV+YFPQGHMEQLE STNQELNQRIPLF+LPSKILCR
Sbjct: 12 DELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSKILCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+HL+AEQETDEVYAQITL+PE +Q EP +PDPCPA+ P P+VHSF KVLTASDTSTH
Sbjct: 72 VVNVHLLAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPRVHSFCKVLTASDTSTH 131
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM++STPTQELVAKDL GYEWRFKHIFRGQPRRHLLTTGWS F
Sbjct: 132 GGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLTTGWSNF 191
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVAT
Sbjct: 192 VTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLATASHAVAT 251
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTV 313
QT+FVVYYKP R SQFI+S+NKYLEA+N K VGMR+K RFEG++SPE +RFSGT+
Sbjct: 252 QTLFVVYYKP----RASQFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENYKRFSGTI 307
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
VGVED SPHW +S WRSLKVQWDEPAS RPDRV PWEIEP +AS Q KNKR
Sbjct: 308 VGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTAAIKNKR 367
Query: 374 PRLSMEVPPL-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHV-AWHHKHSDFSSN 431
PR + E+ L D P A W A L QS ++ +LSV AE KR D+ WHH + S+
Sbjct: 368 PRQASELADLGDTPLAFPTFWDAGLTQS-DMAKLSVMAEIKRSDSSSHMWHH---NSKSS 423
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
+N +S Q++ WL+SP QL+ + DD+K+ISAWP S PH + NND L+
Sbjct: 424 NNGISMNQTEASWLSSP-----SQLYHDTTDDSKSISAWPI----SKPHSERLNNDHFLD 474
Query: 492 QVETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 550
QV+ K E TS RLFGI+LI+HA +++ S + S +T+E I D + S
Sbjct: 475 QVDKEINKVEAATSYRLFGIDLIDHARNNSLSAE-NASGITSECKI--------DVNHVS 525
Query: 551 DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
DI+K KE QEQ+Q+SPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+
Sbjct: 526 DISKASKEWNQEQLQLSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLV 582
Query: 611 DELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
DELE+MFDIKGQL R KWEIV+TDDEGDMMLVGDDPW EFC MV+RIFI SSQDV K+S
Sbjct: 583 DELEKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWLEFCKMVRRIFIYSSQDVHKLS 642
Query: 671 PGSKLPMFSIEGEDILLSSDSAE 693
GSKLP+ S+ E+I+ S D+ E
Sbjct: 643 SGSKLPISSM--EEIVTSLDTTE 663
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/701 (63%), Positives = 528/701 (75%), Gaps = 30/701 (4%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R+G +S+ S+ +LW+ACAGPLVDVPK +RV+YFPQGHMEQL+ASTNQ ++QRI
Sbjct: 75 RMGIISEAVSS------QLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRI 128
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF 123
PLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VHSF
Sbjct: 129 PLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSF 188
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRGQP
Sbjct: 189 CKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQP 248
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSMHL
Sbjct: 249 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHL 308
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
GVLATASHAV TQT+FVVYYKP RTSQFIISLNKYLEAVN FAVGMR+KMRFEGED
Sbjct: 309 GVLATASHAVTTQTLFVVYYKP----RTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGED 364
Query: 304 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
SPERRF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+IEPFVASA+ NL
Sbjct: 365 SPERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNL 424
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSA----ASAP---WSARLAQSHNLTQLSVTAEDKRID 416
QP + K KRPR PLDLP A +S P W A + SH LTQL E + +
Sbjct: 425 TQPPV-KIKRPR------PLDLPVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSE 477
Query: 417 NHVAWHHKHSDFSSNSNFMSRTQS-----DGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 471
+ V W K + + N S S +G W +SP V S LFQ+ +D+K +S
Sbjct: 478 SQVHWPPKPKEINGNVIHNSNCGSSIGRPEGIWSSSPSVNVSLNLFQDLTEDSKTVSTRS 537
Query: 472 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSL 530
SG++T S+PNN + +QVE G++ E CRLFGI+L N++ ++A E P +
Sbjct: 538 ILSGYNTSLSSRPNNGLISDQVEKGKRIEASIGCRLFGIDLTNNSKATALLEMSCPSITS 597
Query: 531 TTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 590
++ IS + + AD D++K E+KQ + S KE+Q +QSC S+R+RTKVQMQ
Sbjct: 598 SSVKGPISAVVSEADRIQNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKVQMQ 657
Query: 591 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 650
GVAVGRA+DLT L GYD LI ELE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDPW E
Sbjct: 658 GVAVGRAVDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQE 717
Query: 651 FCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 691
FC MV++IFI SS++VKKMSP KL S++GE ++S DS
Sbjct: 718 FCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLDS 758
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/686 (63%), Positives = 520/686 (75%), Gaps = 31/686 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELWK AGPLV++P+ ++V YFPQGHMEQLEASTNQELNQ++PLF LP KILC+VV+
Sbjct: 1 ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L+AEQ++DEVYAQITL+PE +Q P+T +P + + KVHSF KVLTASDTSTHGGFSV
Sbjct: 61 LLAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSV 120
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
LRKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 121 LRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 180
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVAGD+FVFLRGENGEL VGVR LARQQSSMPSSVISS SMHLGVLATASHAV+TQT FV
Sbjct: 181 LVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFV 240
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 320
VYYKP R SQFI+SL+KY+EA+NNKF VGMR+KMRFEGE+SPERRFSGT+VGV+D S
Sbjct: 241 VYYKP----RASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMS 296
Query: 321 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 380
PHW +S+WRSL+VQWDE ASI RPDRVSPWEIEPFVA TP++ + KNKRPR
Sbjct: 297 PHWPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVA-PTPSIPHSISVKNKRPR----- 350
Query: 381 PPLDLPSAASAPWSARL---AQSH-NLTQLSVT-AEDKRIDNHVAWHHKHSDFSSNSNFM 435
PPL++P + ++ + + SH + TQLSV+ AE KR +NH WH+K +D N N +
Sbjct: 351 PPLEIPDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSV 410
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW--------PAHSGHSTPHPSKPNND 487
SRT +G WL S SQ Q+ IDD K+ S W AHS TP S +D
Sbjct: 411 SRTAMEGSWLASSSGCVSQHRLQDLIDDRKSGSVWSTVFPGQLAAHSTCPTPRSSNTKSD 470
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD 547
+ + E G+K E SCRLFGIELINH+ S +E+ +T I +++
Sbjct: 471 QVQDLGEKGKKAEASPSCRLFGIELINHSKSPVLTERAADQPNSTPNEI-------TEAE 523
Query: 548 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
S++ K KE+K +QV PKE Q KQ+ TS+RSRTKVQMQG+AVGRA+DLTTL GY
Sbjct: 524 QNSNLPKISKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYG 583
Query: 608 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
LIDELE+MFDIKG+L R KWEIV+TDDEGDMML+GD PW EFCNMV+RI+I SSQDV
Sbjct: 584 QLIDELEKMFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDV- 642
Query: 668 KMSPGSKLPMFSIEGEDILLSSDSAE 693
KM SKL M ++E E +++S+SA+
Sbjct: 643 KMGSVSKLAMSALECEGTVITSESAD 668
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/656 (61%), Positives = 498/656 (75%), Gaps = 8/656 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWK CAGPLVDVP+ G++VYYFPQGHMEQLE+STNQELNQ+IPLF LPSKILC
Sbjct: 20 DDLYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCS 79
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VV+I L+AEQETDEVYAQITL PE Q EP++PDPC ++P+ VH F K+LTASDTSTH
Sbjct: 80 VVHIRLLAEQETDEVYAQITLHPEADQCEPSSPDPCKPEAPKATVHWFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDMNQ+TPTQEL+AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 140 GGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD FVFLRG+NGEL GVR LARQQS +PSSVISSQSMHLGVLATASHA+ T
Sbjct: 200 VTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATASHALMT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+T+FVVY KP RTSQFII L+KYLEA KF++G R++MRFEG++SPERRF+GT+V
Sbjct: 260 KTLFVVYSKP----RTSQFIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERRFTGTIVE 315
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SP W +SKWRSLKVQWDE A++ RPDRVSPW+IEPFVASA NL QP + K+KRPR
Sbjct: 316 VGDLSPQWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQP-MVKSKRPR 374
Query: 376 -LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 434
+ + + SAAS+ W Q+ L + V E + + V W + + +S+S
Sbjct: 375 PVEISSSEVTTNSAASSFWYHSSPQTTELNRGGV-PEVQTSGSQVVWPLRQKESNSSSYS 433
Query: 435 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 494
+R S+G W +SP V LF+++ + +KN+ A S ++P SKPNN + +QVE
Sbjct: 434 SARVCSEGIWPSSPHVDVPLSLFRDSKESSKNVIAGSVLSSIASPILSKPNNVLIHDQVE 493
Query: 495 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 554
G+K+++ + LFG L N+ ++ P E PV G + A +SD D++K
Sbjct: 494 KGKKSDS-SGFWLFGCNLSNNTKTTCPQEIEPVFKTMPSGAKGPIPADAFESDQGLDVSK 552
Query: 555 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
KE+KQ ++ SPKE+Q KQ S R+RTKVQMQGVAVGRA+DLT L GYDHLIDELE
Sbjct: 553 LSKEQKQVILEASPKETQGKQGLTLSTRTRTKVQMQGVAVGRAVDLTALKGYDHLIDELE 612
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+MF+IKG+L + KW +V+TDDE DMML+GDD W +FC +VK+IFI SS +V+KM+
Sbjct: 613 KMFEIKGELRPKNKWAVVFTDDENDMMLMGDDQWPDFCKLVKKIFIYSSDEVQKMN 668
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/698 (60%), Positives = 511/698 (73%), Gaps = 36/698 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLYRELWK CAGPLVDVP+ G RV+YFPQGHMEQL+AST+QELNQ IP F LP+KI CR
Sbjct: 110 DDLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCR 169
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVNI L+AEQ+TDEVYA I LLPE Q EPT PDP ++ P+ K HSF K+LTASDTSTH
Sbjct: 170 VVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNISEPPKQKFHSFCKILTASDTSTH 229
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLP LDM Q+TPTQEL AKDLHG+EW+FKHI+RGQPRRHLLTTGWSTF
Sbjct: 230 GGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTF 289
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V SKRLVAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVLATASHAV T
Sbjct: 290 VASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMT 349
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+TMF+VYYKP RTSQFI+ LNKYLEAVNNKF++GMR+KMRFEG+DSPERRFSGT+VG
Sbjct: 350 RTMFLVYYKP----RTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVG 405
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D S W +S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP + K KR R
Sbjct: 406 VGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAV-KGKRSR 464
Query: 376 LSMEVPPLDL-PSAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVA-WHHKHSDF---- 428
P D+ SAAS W S+ L+QL + TAE + +N V + D
Sbjct: 465 ------PADVSSSAASGFWYH--GSSNELSQLGAATAEVQSKENQVVPCSLRQKDIINSN 516
Query: 429 ---SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN 485
++NS+ SR + +G W +SP + + LF + +N ++ A SG+ PS+ +
Sbjct: 517 PIDANNSSISSRVRMEGVWPSSPHLNVTPNLFSDP--NNNSVLARSPISGYLNV-PSRSS 573
Query: 486 NDTLLEQVETGRKTETGTSCRLFGIELINHATS---SAPSE---KVPV-SSLTTEGHIIS 538
+ E VE G+K E C LFG+ L N+ ++ + PSE + P+ SS+ G S
Sbjct: 574 DGPTCEHVEDGKKIENSLDCWLFGVNLTNNCSNVIITTPSERELRGPISSSVAPSGPKES 633
Query: 539 TISAAADSDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
+AA +++ K Q+Q+ + SP E Q+KQ+ + S R+RTKVQMQGVAVGR
Sbjct: 634 IPAAACETERVQTPNYSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKVQMQGVAVGR 693
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
A DLTTL GYD LI+ELE++F+I+G+LH++ KW + +TDDE DMMLVGDDPW EFCNMVK
Sbjct: 694 AFDLTTLSGYDDLIEELEKLFEIRGELHSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVK 753
Query: 657 RIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK 694
RIFICS +D+KKM KLP S E E++LLS DS +
Sbjct: 754 RIFICSREDLKKMK-CCKLPASSSEVEEVLLSPDSQNR 790
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/673 (63%), Positives = 502/673 (74%), Gaps = 23/673 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELW+ACAGPLVD+P+ +RV+YFPQ +ASTN ELN+RIPLF L SKILCR
Sbjct: 25 DDLYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLFNLDSKILCR 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++I +A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF KVLTASDTSTH
Sbjct: 79 VIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 139 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRL AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHLGVLATASHAV T
Sbjct: 199 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
QT FVVYYKP RT QFIISLNKYLEAVNNKF+VGMR+ M FEGEDSPERRFSGT++G
Sbjct: 259 QTRFVVYYKP----RTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIG 314
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D SPHW +S WRSL+VQWDE SI RPDRVSPW+IEP +SA L QP+ +KNKRPR
Sbjct: 315 AVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPI-SKNKRPR 373
Query: 376 LSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
+ P + + P W + LAQSH+ Q S AE ++ +N+ + HH+ +D SNS+
Sbjct: 374 ---QPTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTISNSS 430
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTPHPSKPNNDTLLE 491
+SRTQ+D WL+ + + + D+K + S W G T H K ++D +L+
Sbjct: 431 CVSRTQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQILD 489
Query: 492 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
+E+G+K ET SCRLFGI+L NH + S + S T+G IST+S A SD KSD
Sbjct: 490 PIESGKKGETVASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-ISTLS-VAQSDPKSD 546
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ E+K E Q S KE Q QS + RSRTKV M G+AVGRA+DLT L GYD LID
Sbjct: 547 NLEVSIERKSELSQASLKEIQCNQSSSANTRSRTKVLMHGMAVGRAVDLTILEGYDQLID 606
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
ELE+MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS
Sbjct: 607 ELEKMFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSS 666
Query: 672 GSK-LPMFSIEGE 683
GSK L +EG+
Sbjct: 667 GSKQLTSIEVEGD 679
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/706 (59%), Positives = 508/706 (71%), Gaps = 29/706 (4%)
Query: 9 SQPSSN--SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
SQP DDLYRELWK CAGPLVDVP+ G RV+YFPQGHMEQL+AST+QELNQ IP F
Sbjct: 17 SQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHF 76
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LP+KI CRVVNI L+AEQ+TDEVYA I LLPE Q EPT PDP +++P+ K HSF K+
Sbjct: 77 NLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKI 136
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLRKHATECLP LDM QSTPTQEL AKDLHG+EW+FKHI+RGQPRRH
Sbjct: 137 LTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRH 196
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWSTFV SKRLVAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVL
Sbjct: 197 LLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVL 256
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
ATASHAV T+TMF+VYYKP RTSQFI+ LNKYLEAVNNKF++ MR+KMRFEG+DSPE
Sbjct: 257 ATASHAVMTRTMFLVYYKP----RTSQFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPE 312
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RRFSGT+VGV D S W +S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP
Sbjct: 313 RRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQP 372
Query: 367 -VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVA-WHHK 424
V K RP + + SAAS W S+ L+QL AE + +N V +
Sbjct: 373 AVKGKRSRPADVLSSGSI-FNSAASGFWYH--GSSNELSQLGAAAEVQSKENQVVPCSLR 429
Query: 425 HSDF-------SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE--AIDDNKNISAWPAHSG 475
D ++NS+ +R + +G W +SP + + LF + + N +SA SG
Sbjct: 430 QKDIINSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNNNNSNNGVSARSLISG 489
Query: 476 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS--SAPSE---KVPVSSL 530
+ PS+ ++ + VE G+KTE C LFG+ L N+ ++ + PSE + P SS+
Sbjct: 490 YPN-VPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVITTPSEREQRGPSSSV 548
Query: 531 TTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQ 588
G S +AA +++ K Q+Q+ + SP + Q+KQ+ + S R+RTKVQ
Sbjct: 549 VLSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQNKQATVLSMRTRTKVQ 608
Query: 589 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
MQGVAVGRA DLTTL GYD LIDELE++F+I+G+L ++ KW + +TDDE DMML GDDPW
Sbjct: 609 MQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGDDPW 668
Query: 649 HEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK 694
EFCNMVKRIFICS +D+KKM KLP S E E+ILLS DS +
Sbjct: 669 PEFCNMVKRIFICSREDLKKMK-CCKLPASSSEVEEILLSPDSQNR 713
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/668 (60%), Positives = 488/668 (73%), Gaps = 68/668 (10%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ---RIPLFRLP 69
+ + +Y ELWK CAGP+VDVP+ +RV+YFPQGHMEQLEAST Q+LN PLF LP
Sbjct: 2 TTGEHMYGELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLP 61
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
KILCRV+++ L AE++TDEVYAQI L+PE + +EP +PDP P +S RPKVHSFSKVLTA
Sbjct: 62 PKILCRVMDVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPESQRPKVHSFSKVLTA 121
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLT
Sbjct: 122 SDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLT 181
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWSTFVT+KRLVAGDTFVFLRGENGEL VGVR RQQ++MPSSVISS SMHLGVLATA
Sbjct: 182 TGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATA 241
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
HA T++MF VYYKP RTSQFIISLNKYLEA++NKF+VG+R+KMRFEGEDSPERRF
Sbjct: 242 CHATQTRSMFTVYYKP----RTSQFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERRF 297
Query: 310 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
SGTVVGV+D S HWKDS WR L+V WDEPASI+RPD+VSPWEIEPFV S N+ V+
Sbjct: 298 SGTVVGVKDCSTHWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSE--NVPHSVMP 355
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
KNKRPR EV L AS WS+ L QSH Q +T++
Sbjct: 356 KNKRPRHYSEVSALG--KTASNLWSSALTQSHEFAQSCITSQR----------------- 396
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
SP QQ +++A +D KN S W A +P+ + NN +
Sbjct: 397 ----------------NSP-----QQCYRDATEDAKN-SDWSA-----SPYSATLNNQMV 429
Query: 490 --LEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD 547
+EQ +K ET S RLFGI+L++ + + + P + I+ + ++SD
Sbjct: 430 FPVEQ----KKPETTASYRLFGIDLLSSSIPATEEKTAPTLPIN-----ITKPTPDSNSD 480
Query: 548 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
KS+++K +EKKQE Q S KE QSK+ ++S RSRTKVQMQGV VGRA+DLT L GY
Sbjct: 481 PKSEVSKLSEEKKQEPAQASSKEVQSKE--ISSTRSRTKVQMQGVPVGRAVDLTVLNGYS 538
Query: 608 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
LID+LE++FDI+G+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VK
Sbjct: 539 ELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVK 598
Query: 668 KMSPGSKL 675
KM+PG++L
Sbjct: 599 KMTPGNQL 606
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/670 (61%), Positives = 492/670 (73%), Gaps = 21/670 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
+DLY ELWKACAGPLV+VP G+RV+YFPQGHMEQLE STNQELN +IP F LP KILCR
Sbjct: 18 EDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCR 77
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVNI L+AE+ETDEVYAQITL PE Q+EP + DP P + R VHSF K+LTASDTSTH
Sbjct: 78 VVNIRLLAEKETDEVYAQITLYPEADQSEPQSADPEPPERTRQTVHSFCKILTASDTSTH 137
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM+QSTPTQEL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 138 GGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 197
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD FVFLRG+NGEL VGVR ARQQS MPSSVISS SMHLGVLATASHAV T
Sbjct: 198 VTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRT 257
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
QT FVVYYKP RTSQFIISLNKYLE V N + VGMR+KMRFEGE+SPERRF+GT+VG
Sbjct: 258 QTYFVVYYKP----RTSQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERRFTGTIVG 313
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SP W DSKWRSLK+QWDEPA+I RP+RVSPWEIEPFV SA+ N P + K+KR R
Sbjct: 314 VGDMSPQWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHPAI-KSKRAR 372
Query: 376 LSMEVPPLDLP--SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
+E+PP ++ SA S W SH ++QLS T E + +N V W SNS+
Sbjct: 373 -PVEIPPPEVTSGSAPSGFWLQGSTISHEISQLSGTNEVQSSNNRVVWALGQRKLDSNSS 431
Query: 434 FMSRTQS-DGEWLTSPRVKFSQQLFQEAIDDNKNI-SAWPAHSGHSTPHPSKPNNDTLL- 490
+ + +G W SP + S L+ ++ + + + P S +S+ SKP++D +
Sbjct: 432 HCNPVANVEGIW-PSPPLNISLNLYPDSTFERELVQQKHPLSSPYSSSVTSKPSSDLIQP 490
Query: 491 EQVETGRKTETGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISAAAD 545
+Q+E G K + CR+FGI+L N+ + E+ + V+ E + + ++ D
Sbjct: 491 DQLEKGSKPDISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVD 550
Query: 546 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
+ S +KE +Q ++ K +Q+K S+R+RTKVQMQGVAVGRA+DLTTL G
Sbjct: 551 AGNLSQPSKE----QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEG 606
Query: 606 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
Y+ LIDELE +F+IKG+L KW IV+TDDE DMMLVGDDPW EFC MVKRIFICSS++
Sbjct: 607 YEDLIDELENVFEIKGELRGINKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEE 666
Query: 666 VKKMSPGSKL 675
VKKMS SK+
Sbjct: 667 VKKMSRESKI 676
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/656 (63%), Positives = 495/656 (75%), Gaps = 31/656 (4%)
Query: 51 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 110
LEASTNQELNQ++PLF LP KILC+VV+ L+AEQ++DEVYAQITL+PE +Q P+T +P
Sbjct: 3 LEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFEP 62
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
+ + KVHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVAKDLHG
Sbjct: 63 PLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHG 122
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQQSS
Sbjct: 123 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSS 182
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
MPSSVISS SMHLGVLATASHAV+TQT FVVYYKP R SQFI+SL+KY+EA+NNKF
Sbjct: 183 MPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKP----RASQFIVSLSKYMEAMNNKFM 238
Query: 291 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 350
VGMR+KMRFEGE+SPERRFSGT+VGV+D SPHW +S+WRSL+VQWDE ASI RPDRVSPW
Sbjct: 239 VGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPW 298
Query: 351 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL---AQSH-NLTQL 406
EIEPFVA TP++ + KNKRPR PPL++P + ++ + + SH + TQL
Sbjct: 299 EIEPFVA-PTPSIPHSISVKNKRPR-----PPLEIPDSDNSTVTTLRHPGSTSHDDRTQL 352
Query: 407 SVT-AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 465
SV+ AE KR +NH WH+K +D N N +SRT +G WL S SQ Q+ IDD K
Sbjct: 353 SVSAAELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWLASSSGCVSQHRLQDLIDDRK 412
Query: 466 NISAW--------PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 517
+ S W AHS TP S +D + + E G+K E SCRLFGIELINH+
Sbjct: 413 SGSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGKKAEASPSCRLFGIELINHSK 472
Query: 518 SSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSC 577
S +E+ +T I +++ S++ K KE+K +QV PKE Q KQ+
Sbjct: 473 SPVLTERAADQPNSTPNEI-------TEAEQNSNLPKISKERKLGLLQVPPKEIQHKQNS 525
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 637
TS+RSRTKVQMQG+AVGRA+DLTTL GY LIDELE+MFDIKG+L R KWEIV+TDDE
Sbjct: 526 STSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDE 585
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
GDMML+GD PW EFCNMV+RI+I SSQDV KM SKL M ++E E +++S+SA+
Sbjct: 586 GDMMLMGDYPWQEFCNMVRRIYIWSSQDV-KMGSVSKLAMSALECEGTVITSESAD 640
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/665 (62%), Positives = 498/665 (74%), Gaps = 59/665 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILCRV 76
LY ELWK C+GPLVDVP+ +RVYYFPQGHMEQLEAST Q +LN PLF LP KILC V
Sbjct: 7 LYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 66
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+N+ L AE++TDEVYAQITL+P ++ + PT+PDP P + RPKVHSFSKVLTASDTSTH
Sbjct: 67 MNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVLTASDTSTH 126
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTF
Sbjct: 127 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 186
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGDTFVFLRGE GEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T
Sbjct: 187 VTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATARHATQT 246
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+TMF+VYYKPR TSQFIISLNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+G
Sbjct: 247 KTMFIVYYKPR----TSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIG 302
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR
Sbjct: 303 VNDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSE--NVPKSVMLKNKRPR 360
Query: 376 LSMEVPPLDLPS-AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 434
EV LD+ AS WS+ L QSH Q +T++
Sbjct: 361 QVSEVSALDVGGITASNLWSSVLTQSHEFAQSCITSQ----------------------- 397
Query: 435 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQ 492
W +SP QQ ++A +D K S W ++ +S + SK + ND ++
Sbjct: 398 ---------W-SSP-----QQCHRDANEDAKK-SDW-INNSYSVSNVSKDSTLNDQMVSP 440
Query: 493 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 552
VE +K ET T+ RLFGI+L++ + +++ + P+ + IS + + SD KS+I
Sbjct: 441 VEQ-KKPETTTNYRLFGIDLMSSSLAASEEKTAPMRPIN-----ISKPTMDSHSDPKSEI 494
Query: 553 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 612
+K +EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGRA+DLT L GY+ LID+
Sbjct: 495 SKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDD 552
Query: 613 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
+E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG
Sbjct: 553 IEKLFDIKGELQSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 612
Query: 673 SKLPM 677
++L M
Sbjct: 613 NQLRM 617
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/647 (61%), Positives = 467/647 (72%), Gaps = 50/647 (7%)
Query: 50 QLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD 109
QLEASTNQEL Q+IP F LPSKILCRVV+IHL+AEQETDEVYAQITL PE Q EPT+PD
Sbjct: 66 QLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEVDQTEPTSPD 125
Query: 110 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
C + + VHSF K+LTASDTSTHGGFSVLRKHATECLPPLDMNQS PTQELVAKDLH
Sbjct: 126 QCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDLH 185
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 229
GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLR +NGEL VGVR LARQQS
Sbjct: 186 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLARQQS 245
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKF 289
MPSSVISSQSMHLGVLATASHAV TQT+FVVYYKP RTSQFII LNKYLEAVN+ F
Sbjct: 246 PMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKP----RTSQFIIGLNKYLEAVNHGF 301
Query: 290 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 349
++GMR+KMRFEGEDSPERRF GT+VGV DFSP W SKWRSLK+QWDEPA++ RPDRVSP
Sbjct: 302 SLGMRFKMRFEGEDSPERRFMGTIVGVGDFSPEWSGSKWRSLKIQWDEPATVQRPDRVSP 361
Query: 350 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 409
WEIEPF ASA+ NL Q V K+KRPR P+D T
Sbjct: 362 WEIEPFAASASVNLPQTV-GKSKRPR------PVD-----------------------TT 391
Query: 410 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 469
A D + N S+ SR +S+G W SP + S LF ++ DDN+ I+
Sbjct: 392 ASDNCLLN-------------GSSCSSRVRSEGIWPHSPHMDVSLSLFSDSADDNRTITT 438
Query: 470 WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS- 528
SG++ PS+ +N + EQVE G+K E CRLFGI+LI++++++AP EK +
Sbjct: 439 QSVISGYAPAFPSRQSNSLVHEQVEKGKKYENSVGCRLFGIDLISNSSTAAPPEKESLGL 498
Query: 529 SLTTEGHIISTISA-AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 587
+ + G S + D D++K KE+K+ +V PKE+ SK TS R+RTKV
Sbjct: 499 KMDSNGPRGSAPAVDGTDEAQNVDVSKASKEQKEAASEVMPKETHSKPGT-TSTRTRTKV 557
Query: 588 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 647
QMQGVAVGRA+DLT L GY LI ELEE+F+IKG+L TR KW +V+TDDEGDMMLVGDDP
Sbjct: 558 QMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGELSTREKWAVVFTDDEGDMMLVGDDP 617
Query: 648 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK 694
W EFC MV++I I SS++ KK+ KL S+EGE + S DS +
Sbjct: 618 WREFCKMVRKILIYSSEEAKKLKTRCKLLASSLEGEGAIASLDSEHR 664
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/687 (60%), Positives = 501/687 (72%), Gaps = 67/687 (9%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
SMHLGVLATA HA T+TMF+VYYKPR TSQFIISLNKYLEA++NKF+VGMR+KMR
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPR----TSQFIISLNKYLEAMSNKFSVGMRFKMR 287
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
FEGEDSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S
Sbjct: 288 FEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS 347
Query: 359 ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH 418
N+ + V+ KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 348 E--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ------- 398
Query: 419 VAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST 478
W +SP QQ ++A +D K S W ++ +S
Sbjct: 399 -------------------------W-SSP-----QQCHRDANEDAKK-SDW-LNNSYSV 425
Query: 479 PHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 536
+ +K + ND ++ VE +K ET + RLFGI+L++ + + + P+ +
Sbjct: 426 SNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPIN----- 479
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
IS + + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGR
Sbjct: 480 ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGR 537
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
A+DL L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVK
Sbjct: 538 AVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVK 597
Query: 657 RIFICSSQDVKKMSPGSKLPMFSIEGE 683
RIFI S ++VKKM+PG++L M E E
Sbjct: 598 RIFIWSKEEVKKMTPGNQLRMLLREVE 624
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/687 (60%), Positives = 500/687 (72%), Gaps = 69/687 (10%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
SMHLGVLATA HA T+TMF+VYYKP RTSQFIISLNKYLEA++NKF+VGMR+KMR
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKP----RTSQFIISLNKYLEAMSNKFSVGMRFKMR 287
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
FEGEDSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S
Sbjct: 288 FEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNS 347
Query: 359 ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH 418
N+ + V+ KNKRPR EV L + AS WS+ L Q H Q +T++
Sbjct: 348 E--NVPKSVMLKNKRPRQVSEVSALGI--TASNLWSSVLTQPHEFAQSCITSQ------- 396
Query: 419 VAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST 478
W +SP QQ ++A +D K S W ++ +S
Sbjct: 397 --W------------------------SSP-----QQCHRDANEDAKK-SDW-LNNSYSV 423
Query: 479 PHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 536
+ +K + ND ++ VE +K ET + RLFGI+L++ + + + P+ +
Sbjct: 424 SNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPIN----- 477
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
IS + + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKVQMQGV VGR
Sbjct: 478 ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGR 535
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
A+DL L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVK
Sbjct: 536 AVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVK 595
Query: 657 RIFICSSQDVKKMSPGSKLPMFSIEGE 683
RIFI S ++VKKM+PG++L M E E
Sbjct: 596 RIFIWSKEEVKKMTPGNQLRMLLREVE 622
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/694 (58%), Positives = 476/694 (68%), Gaps = 100/694 (14%)
Query: 2 ANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ 61
N + +P SD L+ ELW+ACAGPLVDVPK +RV+YFPQGHMEQL+ASTNQ ++Q
Sbjct: 4 GNNIRGGLEPGLESDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQ 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 121
RIPLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VH
Sbjct: 64 RIPLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVH 123
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRG
Sbjct: 124 SFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRG 183
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSM
Sbjct: 184 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSM 243
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATASHAV TQT+FVVYYKPR TSQFIISLNKYLEAVN FAVGMR+KMRFEG
Sbjct: 244 HLGVLATASHAVTTQTLFVVYYKPR----TSQFIISLNKYLEAVNYGFAVGMRFKMRFEG 299
Query: 302 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
EDSPERRF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+IE
Sbjct: 300 EDSPERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIE-------- 351
Query: 362 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKR-IDNHVA 420
P ASA S NLTQ V + R +D VA
Sbjct: 352 ------------------------PFVASA--------SLNLTQPPVKIKRPRPLDLPVA 379
Query: 421 WHHKHSDFSSNSNFMSRTQSDGEWL--TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST 478
+++ S S F W +SP + +Q + +++ WP
Sbjct: 380 ---ENTSSSVPSPF---------WYAGSSPSHELTQLGGVTEVQSSESQVHWP------- 420
Query: 479 PHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS 538
P P + N + + CRLFGI+L N++ ++A E +
Sbjct: 421 PKPKEINGNQ-----------NSSIGCRLFGIDLTNNSKATALLEMI------------- 456
Query: 539 TISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK-VQMQGVAVGRA 597
D++K E+KQ + S KE+Q +QSC S+R+RTK VQMQGVAVGRA
Sbjct: 457 ---------QNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKKVQMQGVAVGRA 507
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 657
+DLT L GYD LI ELE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDPW EFC MV++
Sbjct: 508 VDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRK 567
Query: 658 IFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 691
IFI SS++VKKMSP KL S++GE ++S DS
Sbjct: 568 IFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLDS 601
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/664 (59%), Positives = 472/664 (71%), Gaps = 75/664 (11%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELWK AGPLVDVP+ +RVYYFPQGHMEQLEAST Q+LN PLF LP KILCRV+
Sbjct: 1 MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVM 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
N+ L AE++TDEVYAQI L+PE + +EP +PDP P + +PK HSF+KVLTASDTSTHGG
Sbjct: 61 NVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPELQKPKFHSFTKVLTASDTSTHGG 120
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVT
Sbjct: 121 FSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFVT 180
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGDTFVFLRGENGEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T++
Sbjct: 181 SKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTRS 240
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MF VYYKP RTSQFI+SL+KYLEA+N+KF+VGMR+KMRFEG+DSPERRFSGTVVGV+
Sbjct: 241 MFTVYYKP----RTSQFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERRFSGTVVGVQ 296
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
D SPHWKDSKWRSL V WDEPAS TRPD+VSPWE+EPF AS N+ Q V NKR R
Sbjct: 297 DCSPHWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPFAASE--NVPQSV---NKRARHV 351
Query: 378 MEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 437
E+ L +PS S WS+ L QSH Q +T++ N
Sbjct: 352 NEISALGVPS--SNFWSSALTQSHEFAQSCITSQRNPPQN-------------------- 389
Query: 438 TQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 497
S WP P N ++ VE +
Sbjct: 390 ------------------------------SDWPV-------SPYSTLNGQMVFPVEQKK 412
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK 557
T SCRLFGI+L++ + + + P+ + I+ + +++D KS+I+K +
Sbjct: 413 PETTTASCRLFGIDLMSSSLPAHEEKTAPMRPIN-----ITKPTLDSNADPKSEISKLSE 467
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
EKKQE Q SPKE QSKQ + S+RSRTKVQMQGV VGRA+DLT + GY LID+LE++F
Sbjct: 468 EKKQEPAQASPKEVQSKQ--INSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLF 525
Query: 618 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 677
DI+G+L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L +
Sbjct: 526 DIEGELKSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRI 585
Query: 678 FSIE 681
E
Sbjct: 586 LLTE 589
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/681 (59%), Positives = 479/681 (70%), Gaps = 33/681 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRV 76
DLY +LWK CAGPLVDVP+QG+RV+YFPQGHMEQL+ASTNQ LNQ IP F LP KILCRV
Sbjct: 8 DLYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPPKILCRV 67
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
V+I L+AEQETDEVYA+ITLLPE +Q EPT+PDP P ++ + H+FSK+LTASDTSTHG
Sbjct: 68 VHIQLLAEQETDEVYARITLLPESNQEEPTSPDPSPPETQKQVFHTFSKILTASDTSTHG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HATECLP LDM Q+TP+QELVA+DLHG+EW+FKHIFRGQPRRHLLTTGWSTFV
Sbjct: 128 GFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTTGWSTFV 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LVAGD FVFLRGENGEL VGVR +ARQQS MPSSVISSQSMHLGVLATASHA T
Sbjct: 188 TSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATASHAFLTS 247
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMFVVYYKP RTSQFII +NKYLEA NNKF+VGMR+KMRFE EDSPERRFSGT+VGV
Sbjct: 248 TMFVVYYKP----RTSQFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSGTIVGV 303
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
D SP W +S+WRSLKVQWDEPA I RP+RVS WEIEPF AS N+ Q L K+KR R
Sbjct: 304 GDVSPGWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVTQQ-LVKSKRSRT 362
Query: 377 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS-NFM 435
+ + S A A W + T L + E + +N V W + + + N N
Sbjct: 363 EVSSSEIAPNSPALAFW---YRGPQDPTALGSSTEVQSNENPVVWSTRQKEINGNPMNSS 419
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 495
S+ + +G +SP K LF D KN A PA S S S+P +D + +E
Sbjct: 420 SKVRVEGMRPSSPHSK--PNLFM----DPKNCKAVPAQSTVS----SRPKDDLAHDPMEC 469
Query: 496 G-RKTETGTSCRLFGIELINHATSSAP---SEKVPVSSLTTEGHIISTISAAADSDGKSD 551
R ++ +C +FG+ L N+ T + E++ ++ G S AA +++ +
Sbjct: 470 AKRSSQNPMNCWIFGVNLTNNITKNVTLPDKEQLGCPAIIPSGPKDSIPVAACETEAGQN 529
Query: 552 IAKEF--KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
KE KQ SP SQ R+RTKVQMQG+AVGRA+DLT L YD L
Sbjct: 530 PYYSLSNKEHKQNISDGSPSASQRH------TRTRTKVQMQGIAVGRAVDLTVLKDYDDL 583
Query: 610 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
IDELE+MFDIKG+L +TKW I +TDD DMMLVGDDPW EFC +VKRIFICS +DVKKM
Sbjct: 584 IDELEKMFDIKGELQMQTKWAITFTDDGNDMMLVGDDPWPEFCTVVKRIFICSREDVKKM 643
Query: 670 SPGSKLPMFSIEGEDILLSSD 690
SK S GE+ LLS D
Sbjct: 644 K--SKHSSSSSVGEETLLSQD 662
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/662 (57%), Positives = 477/662 (72%), Gaps = 38/662 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY ELW+ CAGP+VDVP++G+RVYYFPQGHMEQL AS NQE++QR+P F L SK+LCR
Sbjct: 8 DALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLKSKVLCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
V+N H +AE++ DEVY QITL+PE P EPTTPDP +P+ HSF KVLTASDTST
Sbjct: 68 VINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHA ECLPPLD+NQ TPTQEL+AKDLH EWRFKHIFRGQPRRHLLTTGWST
Sbjct: 128 HGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTTGWST 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD+FVFLRG NG+L VGV+ L RQQSSMPSSV+SSQSMHLGVLATASHAV
Sbjct: 188 FVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLATASHAVT 247
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
TQTMFVVYYKP RT+QFI+ +NKYLEA+ +++AVGMR+KM+FE E +P+RRF GT+V
Sbjct: 248 TQTMFVVYYKP----RTTQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRRFMGTIV 303
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
G++D S WK+S WRSLKV+WDEPA+I RPDRVSPWEI+P+V S LV P KNKR
Sbjct: 304 GIDDLSSQWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEKNKRH 363
Query: 375 RLSMEVPPLDLPSA--ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
RL E+ + PS+ ASA W+ L +S + + S+N
Sbjct: 364 RLHSEIKISEQPSSSNASAVWNPSL-RSPQFNTFGINS------------------STNC 404
Query: 433 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ 492
S T+S + P + S L E +D ++ W P + N ++
Sbjct: 405 ALASLTESGWQL---PHLNTSGMLVDEP-EDGRSAPTWCGFPCVLAPQFGQGTNQPIVIP 460
Query: 493 VETGRKTETGTSCRLFGIELINHATSSAPS----EKVPVSSLTTEGHIISTISAAADSDG 548
+ GRK +T +CRLFGI+L + + S+ + + +S + E +T+ A DSD
Sbjct: 461 TD-GRKCDTKKTCRLFGIDLKSSSISTTEARLQLQPAGISCVFAERAPPNTV-PAGDSDQ 518
Query: 549 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 608
KS+++ +FK++ Q +++ KE QSKQSC S RSRTKVQMQGVAVGRA+DLT L GYD
Sbjct: 519 KSELSVDFKDQMQGHLRLPLKEVQSKQSC--STRSRTKVQMQGVAVGRAVDLTILKGYDE 576
Query: 609 LIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
L ELEEMF+I+G+L +R KW I++TDDEGD ML+GD PW +FCN+V++IFICSSQD+KK
Sbjct: 577 LTKELEEMFEIQGELQSRQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKK 636
Query: 669 MS 670
++
Sbjct: 637 LT 638
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/587 (62%), Positives = 430/587 (73%), Gaps = 16/587 (2%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R +S DDLY ELW+ACAGPLVD+P+ +RV+YFPQGHMEQLEASTN ELN+RI
Sbjct: 10 RQSCVSAQGCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRI 69
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF 123
PLF L SKILCRV++I +A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF
Sbjct: 70 PLFNLDSKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSF 129
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
KVLTASDTSTHGGFSVLRKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQP
Sbjct: 130 CKVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQP 189
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSKRL AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHL
Sbjct: 190 RRHLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHL 249
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
GVLATASHAV TQT FVVYYKP RT QFIISLNKYLEAVNNKF+VGMR+ M FEGED
Sbjct: 250 GVLATASHAVTTQTRFVVYYKP----RTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGED 305
Query: 304 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
SPERRFSGT++G D SPHW +S WRSL+VQWDE SI RPDRVSPW+IEP +SA L
Sbjct: 306 SPERRFSGTIIGAVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGL 365
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAW 421
QP KNKRPR + P + + P W + LAQSH+ Q S AE ++ +N+ +
Sbjct: 366 SQPXF-KNKRPR---QPTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESC 421
Query: 422 HHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTP 479
HH+ +D SNS+ +SRTQ+D WL+ + + + D+K + S W G T
Sbjct: 422 HHRETDTISNSSCVSRTQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTS 480
Query: 480 HPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST 539
H K ++D +L+ +E+G+K ET SCRLFGI+L NH + S + S T+G IST
Sbjct: 481 HLVKLSDDQILDPIESGKKGETVASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-IST 538
Query: 540 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
+S A SD KSD + E+K E Q S KE Q QS + RSRTK
Sbjct: 539 LS-VAQSDPKSDNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTK 584
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/695 (54%), Positives = 452/695 (65%), Gaps = 106/695 (15%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D LY ELWKACAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVDADFRTSRSNDDQLYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPT 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
SM LGVLATASHAV T T+FVV+YKPRI SQFIIS+NKY+ A+ N F++GMR++MRF
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRI----SQFIISVNKYMVAMKNGFSLGMRFRMRF 296
Query: 300 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
EGE+SPER F+GT+VG D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA
Sbjct: 297 EGEESPERIFTGTIVGSGDLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSA 356
Query: 360 -TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH 418
TP Q +K+KR R P+++ + +A
Sbjct: 357 LTPTPTQQ-QSKSKRSR------PIEITGSPAA--------------------------- 382
Query: 419 VAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHS 477
SNF+S E ++P VK LF + A + N N S + SG
Sbjct: 383 -------------SNFLSSFPQSHE--SNPSVKL---LFHDIATERNSNKSVF--SSGLQ 422
Query: 478 TPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGH 535
+KTE + CRLFG +L TS S +P +
Sbjct: 423 C------------------KKTEAPVTSCCRLFGFDL----TSKPASAPIPCNK-----Q 455
Query: 536 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 595
+IS S +DS K + SPKE + + TS RSR KVQMQG AVG
Sbjct: 456 LISVDSNISDSTPKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVG 502
Query: 596 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
RA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGDMMLVGDDPW+EFC M
Sbjct: 503 RAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWTIVFTDDEGDMMLVGDDPWNEFCKMA 562
Query: 656 KRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 690
K++FI S +VKK+S S LP EG + L SD
Sbjct: 563 KKLFIYPSDEVKKLSSKSLLP---DEGTIVYLESD 594
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/680 (54%), Positives = 461/680 (67%), Gaps = 57/680 (8%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M + G P +D LY+ELW ACAGPLV +P +G+RVYYFPQGHMEQLEAS +Q +
Sbjct: 1 MNHTSGGNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGME 60
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
Q++P F LPSKILC+VVN+ AE ETDEVYAQITLLPEP Q+E T+PDP + R V
Sbjct: 61 QQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTV 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFR
Sbjct: 121 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQS
Sbjct: 181 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQS 240
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
MHLGVLATASHA+AT T+F V+YKPR T S+FI++LNKY+EA N+K +VGMR+KMRFE
Sbjct: 241 MHLGVLATASHAIATGTLFSVFYKPR--TSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFE 298
Query: 301 GEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
GE+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RP+RVSPW++EP VA+
Sbjct: 299 GEEVPERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVAT- 357
Query: 360 TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHV 419
TP+ QP + +NKRPR S+ LPS + NL+ L +
Sbjct: 358 TPSNSQP-MQRNKRPRPSV------LPSPTA-----------NLSALGM----------- 388
Query: 420 AWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTP 479
W K S SS ++ +Q + SP + + + N +++ +S + P
Sbjct: 389 -W--KPSVESSAFSY-GESQRGRDPYPSPNFSTTAKANSLSFCGNSQVTSVSPNSMYR-P 443
Query: 480 HPSKPNNDTLLEQVETG---RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 536
+ + D+ V R+ TG RLFGI+LI++ + S V VS T G+
Sbjct: 444 NQVESVTDSFAPVVNKDLGERRQGTGIGYRLFGIQLIDNFNAEGTSPVVTVSG--TVGND 501
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
+S A+SD S+ K QE QS+Q RS TKV MQGVAVGR
Sbjct: 502 RPVVSLEAESDQHSEPEKSCLRSHQEL--------QSRQI-----RSCTKVHMQGVAVGR 548
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
A+DLT Y+ L+ +LEEMFDI+G+L T KW++VYTD+E DMM VGDDPWHEFC+MV
Sbjct: 549 AVDLTQFERYEDLLRKLEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVGDDPWHEFCSMV 608
Query: 656 KRIFICSSQDVKKMSPGSKL 675
K+IFI +S++VK++SP KL
Sbjct: 609 KKIFIYASEEVKRLSPKIKL 628
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/682 (54%), Positives = 464/682 (68%), Gaps = 64/682 (9%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S+ S +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F L
Sbjct: 11 SRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNL 70
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
PSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K LT
Sbjct: 71 PSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLT 130
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLL
Sbjct: 131 ASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLAT
Sbjct: 191 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLAT 250
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
ASHA++T T+F V+YKPR T S+FI+S+NKYLEA N+K +VGMR+KMRFEG++ PERR
Sbjct: 251 ASHAISTGTLFSVFYKPR--TSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERR 308
Query: 309 FSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++ N QP
Sbjct: 309 FSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN-SQPT 367
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
+NKR R PP+ LPS +T S+ W
Sbjct: 368 -QRNKRSR-----PPI-LPST--------------MTDSSLQG---------IWKSP--- 394
Query: 428 FSSNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGHSTPHPS 482
+ + F R G L SPR + F + NK++ W + +ST
Sbjct: 395 -ADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLENST---- 448
Query: 483 KPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTIS 541
+P + LE E+G K + TG CRLFGI+L+ ++ + + P+S + + ++
Sbjct: 449 EPFSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDRSVPSLD 506
Query: 542 AAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 595
+D +SDI + + ++ SP+ESQS+Q RS TKV MQG+AVG
Sbjct: 507 VESDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVG 560
Query: 596 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNM 654
RA+DLT GY+ L+ +LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW EFC++
Sbjct: 561 RAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSV 620
Query: 655 VKRIFICSSQDVKKMSPGSKLP 676
V+++FI + ++VKK+SP LP
Sbjct: 621 VRKMFIYTPEEVKKLSPKIGLP 642
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/669 (53%), Positives = 456/669 (68%), Gaps = 76/669 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 19 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 79 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 139 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 199 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 258
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+V
Sbjct: 259 TGTLFSVFYKPR--ASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIV 316
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV D S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KR
Sbjct: 317 GVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKR 374
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 375 PR----SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP--- 423
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+LF TP P+K
Sbjct: 424 ---------------------ELF--------------------TPVPNK---------- 432
Query: 494 ETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSD 551
E G+K E G RLFGI+L++++ E +PV+++++ G + ADSD +S
Sbjct: 433 EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQ 489
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHL 609
+ + K V P++S S L S RS TKV MQG+AVGRA+DLT Y L
Sbjct: 490 RSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKEL 548
Query: 610 IDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
+ +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK+
Sbjct: 549 LSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKE 608
Query: 669 MSPGSKLPM 677
+SP +KLP+
Sbjct: 609 LSPKAKLPL 617
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/669 (53%), Positives = 456/669 (68%), Gaps = 76/669 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 17 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 76
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 77 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 136
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 137 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 196
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 197 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 256
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+V
Sbjct: 257 TGTLFSVFYKPR--ASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIV 314
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV D S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KR
Sbjct: 315 GVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKR 372
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 373 PR----SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP--- 421
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+LF TP P+K
Sbjct: 422 ---------------------ELF--------------------TPVPNK---------- 430
Query: 494 ETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSD 551
E G+K E G RLFGI+L++++ E +PV+++++ G + ADSD +S
Sbjct: 431 EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQ 487
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHL 609
+ + K V P++S S L S RS TKV MQG+AVGRA+DLT Y L
Sbjct: 488 RSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKEL 546
Query: 610 IDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
+ +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK+
Sbjct: 547 LSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKE 606
Query: 669 MSPGSKLPM 677
+SP +KLP+
Sbjct: 607 LSPKAKLPL 615
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/674 (55%), Positives = 462/674 (68%), Gaps = 55/674 (8%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEASTNQ +Q++PLF LP+KILCR
Sbjct: 20 DALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLFSLPAKILCR 79
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VV++ L AE ETDEVYAQITLLPEP Q E T+PDP + PR VHSF K LTASDTSTH
Sbjct: 80 VVHVQLRAEPETDEVYAQITLLPEPEQGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLP LDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 140 GGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++T
Sbjct: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAIST 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
T+F V+YKPR T S+FIISLNKYLEA N+K +VGMR+KMRFEGED+PERRFSGT++G
Sbjct: 260 GTLFSVFYKPR--TSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERRFSGTIIG 317
Query: 316 VED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
V D S W DS+WRSLKVQWDEP+SI RP RVSPWE+EP VA A P+ QP ++KR
Sbjct: 318 VGDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVA-AVPSAPQPT-PRSKRA 375
Query: 375 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 434
R PP LPS P +R +SH ID A+ H S +
Sbjct: 376 R-----PPALLPSTPDIPACSRW-KSH-------------IDAGSAFSHS-SGLQRGLDL 415
Query: 435 MSRTQSDGEWLTSPRVK---FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
S S + ++ FS + + + N+S W + TP S N
Sbjct: 416 YSSANSPTVFANMTKIGSLPFSGT--NASCEISGNLSYWSNRA--ETPAKSFMANS---- 467
Query: 492 QVETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK- 549
+ E+G R+ E+G RLFGI+L++++T + S VS G + S DSD +
Sbjct: 468 KRESGDRRPESGNGYRLFGIQLVDNSTMAESSPAAAVS-----GGVGEDRSVPEDSDQQS 522
Query: 550 --SDIAKE----FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
SDI + K + +SP+E QS+Q+ RS TKV +QG+AVGRA+DL+ L
Sbjct: 523 QPSDIDRSDLPAVSGKPDKYCLMSPQEMQSRQT-----RSCTKVHLQGMAVGRAVDLSRL 577
Query: 604 VGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
Y+ L+++LE+MF+I+G+L T KW++VYTDDE D MLVGDDPWHEFC +V++I I +
Sbjct: 578 DCYEDLLNKLEQMFNIEGELSGPTKKWQLVYTDDEDDTMLVGDDPWHEFCGIVRKINIYT 637
Query: 663 SQDVKKMSPGSKLP 676
++VK + P S LP
Sbjct: 638 PEEVKNLVPRSGLP 651
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/688 (52%), Positives = 467/688 (67%), Gaps = 82/688 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS + L Q++P F LPSKILC
Sbjct: 16 NDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR K+HSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRVKIHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQP+RHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+L AGD F+FLRGENGEL VGVR + RQQS++PSSVISS SMHLGVLATASHA+A
Sbjct: 196 FVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASHAIA 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+NKYLE ++K +VGMR+KMRFEG++ PERRFSGT+V
Sbjct: 256 TGTLFSVFYKPR--TSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEGDEIPERRFSGTIV 313
Query: 315 GVED--FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
GV D S W DS+WRSLKVQWDEP+SI RPDRVS WE+EP V++ N QP +NK
Sbjct: 314 GVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLAN-SQPT-QRNK 371
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
R R PL LPS T D + W K S S++
Sbjct: 372 RAR------PLILPS---------------------TMPDSSLQG--IW--KSSVESTSF 400
Query: 433 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--- 489
++ Q G + P KF N + + + SG+S+ P+N ++
Sbjct: 401 SYCDPQQGRGLY---PSPKF-----------NSSATNFIGFSGNSS--VGSPSNKSIYWS 444
Query: 490 ------LEQV------ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 536
LE + E G K + TG CRLFGI+L+ ++ + + V +S +
Sbjct: 445 NRMENNLESISAIALKEAGEKRQGTGNGCRLFGIQLLENSNAEGNLQTVTLSGRVGDDRS 504
Query: 537 ISTISAAAD------SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 590
+ ++ A +D + +SDI + ++ +Q SP+ESQSKQ RS TKV MQ
Sbjct: 505 VPSLDAESDQHSEPSNANRSDIPSVSCDAEKSCLQ-SPQESQSKQI-----RSCTKVHMQ 558
Query: 591 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWH 649
G+AVGRA+DLT GY+ L+ +LE+MF+IK +L + KW++VYTD+E DMM+VGDDPW
Sbjct: 559 GMAVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCGSLKKWQVVYTDNEDDMMMVGDDPWD 618
Query: 650 EFCNMVKRIFICSSQDVKKMSPGSKLPM 677
EFC++V++IFI ++++VKK+SP +LPM
Sbjct: 619 EFCSVVRKIFIYTAEEVKKLSPKIRLPM 646
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/668 (54%), Positives = 453/668 (67%), Gaps = 48/668 (7%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKILC+
Sbjct: 21 DALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCK 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+ L AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTH
Sbjct: 81 VVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
T+F V+YKPR T S+F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++G
Sbjct: 261 GTLFSVFYKPR--TSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIG 318
Query: 316 VEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKR 373
V S W +S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K R
Sbjct: 319 VGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRAR 378
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
P S + P P SA Q + + L T E + S+ N
Sbjct: 379 PPASNSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPN 423
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+ + TS V FS + A+ NK+ WP + + + + +V
Sbjct: 424 PI--------FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRANSYSAS------ISKV 467
Query: 494 ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 552
+ +K E + CRLFGIE+ SSA P+++++ G S A+SD S
Sbjct: 468 PSEKKQEPSSAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQPAASVDAESDQLSQP 522
Query: 553 AKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ K + + SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L
Sbjct: 523 SHANKSDAPAASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRC 577
Query: 612 ELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++
Sbjct: 578 KLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLT 637
Query: 671 PGSKLPMF 678
P SKLP+
Sbjct: 638 PKSKLPII 645
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/679 (54%), Positives = 462/679 (68%), Gaps = 59/679 (8%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P + +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F LPS
Sbjct: 6 PGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPS 65
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTAS
Sbjct: 66 KILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTAS 125
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTT
Sbjct: 126 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 185
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATAS
Sbjct: 186 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATAS 245
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA+AT T+F V+YKPR T S+FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFS
Sbjct: 246 HAIATGTLFSVFYKPR--TSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFS 303
Query: 311 GTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP
Sbjct: 304 GTIVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-SNPPTNSQPS-Q 361
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
+NKR R + +P L S+ W + + + + D H D
Sbjct: 362 RNKRSRPPI-LPSTMLDSSLQGVWKSPVESA------PFSYRD---------HQHGRDVY 405
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
++NF S + F NK+I W + +ST S
Sbjct: 406 PSTNFNSTATG--------FLGFGGN----CSASNKSI-YWSSRIENSTESFSP------ 446
Query: 490 LEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLT---TEGHIISTISAAAD 545
+ E G K + T CRLFGI+L H S++ E +P+ SL+ + ++ ++ A +D
Sbjct: 447 VAVKEFGEKRQGTANGCRLFGIQL--HDNSNSNEESLPMVSLSGRVGDDGLLPSLDAESD 504
Query: 546 SD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 599
+SD + ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+D
Sbjct: 505 QHSEPSNVNRSDFPSVSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVD 558
Query: 600 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 658
LT GY+ L+ +LEEMFDI G+L TK W++VYTD+E DMM+VGDDPW EFC++V++I
Sbjct: 559 LTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRKI 618
Query: 659 FICSSQDVKKMSPGSKLPM 677
FI ++++VKK+SP LP+
Sbjct: 619 FIYTAEEVKKLSPKIGLPI 637
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/668 (54%), Positives = 453/668 (67%), Gaps = 48/668 (7%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKILC+
Sbjct: 21 DALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCK 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
VVN+ L AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTH
Sbjct: 81 VVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
T+F V+YKPR T S+F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++G
Sbjct: 261 GTLFSVFYKPR--TSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIG 318
Query: 316 VEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKR 373
V S W +S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K R
Sbjct: 319 VGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRAR 378
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
P S + P P SA Q + + L T E + S+ N
Sbjct: 379 PPASSSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPN 423
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+ + TS V FS + A+ NK+ WP + + + + +V
Sbjct: 424 PI--------FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRADSYSAS------ISKV 467
Query: 494 ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 552
+ +K E + CRLFGIE+ SSA P+++++ G S A+SD S
Sbjct: 468 PSEKKQEPSSAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQLAASVDAESDQLSQP 522
Query: 553 AKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ K + + SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L
Sbjct: 523 SHANKSDAPAASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRC 577
Query: 612 ELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++
Sbjct: 578 KLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLT 637
Query: 671 PGSKLPMF 678
P SKLP+
Sbjct: 638 PKSKLPII 645
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/669 (53%), Positives = 455/669 (68%), Gaps = 78/669 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 16 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRL AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+
Sbjct: 196 FVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKP S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+V
Sbjct: 256 TGTLFSVFYKP----SPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIV 311
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV D S W DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KR
Sbjct: 312 GVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKR 369
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P L P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 370 PR----SPVLSSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP--- 418
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+LF TP P+K
Sbjct: 419 ---------------------ELF--------------------TPVPNK---------- 427
Query: 494 ETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSD 551
E G+K E G RLFGI+L++++ E +PV+++++ G + ADSD +S
Sbjct: 428 EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQ 484
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHL 609
+ + K V P++S S L S RS TKV MQG+AVGRA+DLT Y L
Sbjct: 485 RSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKEL 543
Query: 610 IDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
+ +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK+
Sbjct: 544 LSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKE 603
Query: 669 MSPGSKLPM 677
+SP +KLP+
Sbjct: 604 LSPKAKLPL 612
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/688 (53%), Positives = 459/688 (66%), Gaps = 68/688 (9%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PL
Sbjct: 5 GVARGPGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPL 64
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSK 125
F LP KILC+VVN+ L AE ++DEVYAQI L PE QNEPT+PD P + R VHSF K
Sbjct: 65 FNLPPKILCKVVNVELRAETDSDEVYAQIMLQPEAEQNEPTSPDAEPPEPERCNVHSFCK 124
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRR
Sbjct: 125 TLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRR 184
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGV
Sbjct: 185 HLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGV 244
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
LATASHA++T T+F V+YKPR T S+F++S+NKYLEA N+K +VGMR+KMRFEG++SP
Sbjct: 245 LATASHAISTGTLFSVFYKPR--TSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESP 302
Query: 306 ERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
ERRFSGT++G+ + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP A+ P
Sbjct: 303 ERRFSGTIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDAT-NP 361
Query: 362 NLVQPVLAKNKR------PRLSMEVPPLDLPSAASAPWS--ARLAQSHNLTQLSVTAEDK 413
QP L +NKR P ++ E+PP+ W A AQ+ + + L T E
Sbjct: 362 QPPQPPL-RNKRARPPASPSIAPELPPV------FGFWKSPAEPAQAFSFSGLQRTQE-- 412
Query: 414 RIDNHVAWH-HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA 472
+H + +S FSS+ N V F+ + E N N W
Sbjct: 413 ------LYHSNPNSIFSSSLN----------------VGFNSK--NERSTPNNNHLYWTM 448
Query: 473 HSGHSTPHPSKPNNDTLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLT 531
+ + + N + T +K E+ TS CRLFGIE+ SA S V V+S+
Sbjct: 449 RETRTESYSASIN------KAPTEKKQESATSGCRLFGIEI-----GSAVSPVVTVASVG 497
Query: 532 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 591
+ ++ +D + A + + + SP E++S+Q RS TKV MQG
Sbjct: 498 QDPPPALSVDVESDQLSQPSHANK-TDAPAASSERSPNETESRQV-----RSCTKVIMQG 551
Query: 592 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHE 650
+AVGRA+DLT L GYD L +LEEMFDI G+L KW++VYTDDE DMMLVGDDPW+E
Sbjct: 552 MAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLRKWKVVYTDDEDDMMLVGDDPWNE 611
Query: 651 FCNMVKRIFICSSQDVKKMSPGSKLPMF 678
FC MVKRI+I S ++ K ++P +KLP+
Sbjct: 612 FCRMVKRIYIYSYEEAKSLTPKAKLPVI 639
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/688 (54%), Positives = 464/688 (67%), Gaps = 68/688 (9%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
S++ S +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F
Sbjct: 4 SITFTGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF 63
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LPSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K
Sbjct: 64 NLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKT 123
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRH
Sbjct: 124 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRH 183
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLR----GENGELHVGVRCLARQQSSMPSSVISSQSMH 242
LLTTGWS FV+SK+LVAGD F+FLR GENGEL VGVR L RQQS+MPSSVISS SMH
Sbjct: 184 LLTTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMH 243
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLATASHA++T T+F V+YKPR T S+FI+S+NKYLEA N+K +VGMR+KMRFEG+
Sbjct: 244 LGVLATASHAISTGTLFSVFYKPR--TSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGD 301
Query: 303 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ PERRFSGT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++
Sbjct: 302 EVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPA 361
Query: 362 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAW 421
N QP +NKR R PP+ LPS T D + W
Sbjct: 362 N-SQPT-QRNKRSR-----PPI-LPS---------------------TMTDSSLQG--IW 390
Query: 422 HHKHSDFSSNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGH 476
+ + F R G L SPR + F + NK++ W + +
Sbjct: 391 KSP----ADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLEN 445
Query: 477 STPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGH 535
ST +P + LE E+G K + TG CRLFGI+L+ ++ + + P+S +
Sbjct: 446 ST----EPFSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDR 499
Query: 536 IISTISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 589
+ ++ +D +SDI + + ++ SP+ESQS+Q RS TKV M
Sbjct: 500 SVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHM 553
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPW 648
QG+AVGRA+DLT GY+ L+ +LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW
Sbjct: 554 QGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPW 613
Query: 649 HEFCNMVKRIFICSSQDVKKMSPGSKLP 676
EFC++V+++FI + ++VKK+SP LP
Sbjct: 614 LEFCSVVRKMFIYTPEEVKKLSPKIGLP 641
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/676 (54%), Positives = 461/676 (68%), Gaps = 62/676 (9%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST-NQELNQRIPLFRLPSKILC 74
D LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEAST +Q L+Q++P F LPSKILC
Sbjct: 20 DALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMPSFNLPSKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VV++ L AE ETDEVYAQ+TLLPEP Q+E T+PDP + R VHSF K LTASDTST
Sbjct: 80 KVVHVQLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQRCTVHSFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++
Sbjct: 200 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHLGVLATASHAIS 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+SLNKYLEA N+K +VGMR+KMRFEGE+ PERRFSGT+V
Sbjct: 260 TGTLFSVFYKPR--TSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIV 317
Query: 315 GVED--FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
GV D S W DS+WRSLKVQWDEPASI RP+RVS WE+EP VA+A P +QP +NK
Sbjct: 318 GVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTNLQPA-QRNK 376
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH--HKHSDFSS 430
R R PP+ LPSA + +L+ L + + + H+ D
Sbjct: 377 RAR-----PPV-LPSA-----------TPDLSVLGMWKSSVESPSGFPYCDPHRGRDLYP 419
Query: 431 NSNFMSRTQS---DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
+ F S T++ +SP S ++ + S PA + S
Sbjct: 420 SPKFSSITKTNSFSFSGNSSPAAVSSNSMYWSNRMETATESFAPAVNKESG--------- 470
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHAT--SSAP----SEKVPVSSLTTEGHIISTIS 541
E R T G+ CRLFG +L++++T + P E PV SL E S
Sbjct: 471 ------EKRRDT--GSGCRLFGFQLLDNSTLEETLPVLTVGEDQPVPSLDVE----SDQH 518
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
+ + +SDI E + ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT
Sbjct: 519 SEPSNINRSDIPSVSCEPDKLSLR-SPQESQSRQI-----RSCTKVHMQGIAVGRAVDLT 572
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y+ L+ +LEEMFDI+G+L T W++VYTDDE DMM+VGDDPW EFC+MV++IFI
Sbjct: 573 RFDRYEDLLKKLEEMFDIQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFI 632
Query: 661 CSSQDVKKMSPGSKLP 676
++++VK++SP KLP
Sbjct: 633 YTAEEVKRLSPKIKLP 648
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/679 (54%), Positives = 465/679 (68%), Gaps = 59/679 (8%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P + +D LY+ELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS NQ L Q++P F LPS
Sbjct: 6 PGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPS 65
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTAS
Sbjct: 66 KILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTAS 125
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTT
Sbjct: 126 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 185
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLATAS
Sbjct: 186 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATAS 245
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA+AT T+F V+YKPR T S+FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFS
Sbjct: 246 HAIATGTLFSVFYKPR--TSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFS 303
Query: 311 GTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+VGV D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP
Sbjct: 304 GTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-STPPTNPQPS-Q 361
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
+NKR R PP+ LPS + P S+ + + +A D H D
Sbjct: 362 RNKRSR-----PPI-LPS--TMPDSSLQGVWKSPVE---SAPFSYCD-----HQHGRDVY 405
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
++NF S + F + NK+I W + +ST + +
Sbjct: 406 PSTNFNSTATG--------FLGFGGNCYA----SNKSI-YWSSRMENST------ESFSP 446
Query: 490 LEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAADSD 547
+ E G K + T CRLF I+L H S++ E +P+ +L+ G S A+SD
Sbjct: 447 VALKEFGEKRQGTANGCRLFRIQL--HDNSNSNEESLPMVTLSGRMGDDGPLPSLDAESD 504
Query: 548 --------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 599
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+D
Sbjct: 505 QHSEPSNVNRSDIPSVSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVD 558
Query: 600 LTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 658
LT GY+ L+ +LEEMFDI G+L T KW++VYTD+E DMM+VGDDPW EFC++V++I
Sbjct: 559 LTRFDGYEDLLRKLEEMFDITGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKI 618
Query: 659 FICSSQDVKKMSPGSKLPM 677
FI ++++V+K+SP LP+
Sbjct: 619 FIYTAEEVRKLSPKIGLPI 637
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/665 (55%), Positives = 442/665 (66%), Gaps = 110/665 (16%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
D LY ELWKACAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ + ++ IP+F LP KILC
Sbjct: 7 DQLYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKILC 66
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RV+N+ L AE ETDEVYAQITL PE Q+EPT+ DP + + V SF K+LTASDTST
Sbjct: 67 RVLNVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLTEPAKQTVDSFVKILTASDTST 126
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHATECLPPLDM Q+TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWST
Sbjct: 127 HGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 186
Query: 195 FVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FVTSKRLVAGD FVFLRG + G+L VGVR LA+QQS+MP+SVISSQSMHLGVLATASHA
Sbjct: 187 FVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAF 246
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T TMFVV YKPRI SQFIIS+NKY+ A+ F +GMR++MRFEGE+SPER F+GT+
Sbjct: 247 NTTTMFVVLYKPRI----SQFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERIFTGTI 302
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNK 372
VG D SP W SKWRSL+VQWDE +++ RP++VSPWEIEPF+ S T + QP +K+K
Sbjct: 303 VGTGDLSPQWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQP-YSKSK 361
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
R R P+D PS + S VA S
Sbjct: 362 RSR------PID-PSVSEITGSP-----------------------VA-----------S 380
Query: 433 NFMSRTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
NF+SR E SP +K LFQ+ + + N N + PA S
Sbjct: 381 NFLSRFPKSHE--PSPSLKL---LFQDPSSERNSNKTEAPATS----------------- 418
Query: 492 QVETGRKTETGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 550
CRLFG +L + A++ P++K + IS +++ G +
Sbjct: 419 ------------CCRLFGFDLKSKPASAPNPNDKQQL------------ISVDSNNTGSA 454
Query: 551 DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
K Q+ P S+ ++ +S RSRTKVQMQG AVGRA+DLT L YD LI
Sbjct: 455 --------KCQD-----PNSSKDQKQQTSSTRSRTKVQMQGTAVGRAVDLTLLRSYDELI 501
Query: 611 DELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
ELE+MF+I+G+L T+ KW IV+TDDEGDMMLVGDDPW EFC M K++FI SS +VKKMS
Sbjct: 502 RELEKMFEIEGELRTKDKWAIVFTDDEGDMMLVGDDPWDEFCKMAKKLFIYSSDEVKKMS 561
Query: 671 PGSKL 675
S L
Sbjct: 562 SKSLL 566
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/696 (53%), Positives = 464/696 (66%), Gaps = 72/696 (10%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
+SD LYRELW ACAGPLV +P+Q +RVYYFPQGHMEQLEAS +Q L Q++P F LPSKIL
Sbjct: 80 SSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKIL 139
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
C+VVN+ L AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTS
Sbjct: 140 CKVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTS 199
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS
Sbjct: 200 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 259
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA+
Sbjct: 260 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAI 319
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T T+F V+YKPR T S F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+
Sbjct: 320 STGTLFSVFYKPR--TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTI 377
Query: 314 VGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
VG+ D SP W +S+WRSLKVQWDEP+SI RPD+VS WE+EP VAS P QP +NK
Sbjct: 378 VGLGDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNK 435
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSS 430
RPR P LPS S+P + L + S AE +R + + K S +S
Sbjct: 436 RPR------PTVLPS--SSPDATVLGGWKPTVESSTFSYAEPQRGRDLYS-SPKFSTAAS 486
Query: 431 NS------NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKP 484
NS + + S+ W + RV +NI +H + P
Sbjct: 487 NSLGFNANSSLGAVSSNNYWCNTNRV--------------ENIMDPSSHGANREP----- 527
Query: 485 NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISA 542
VE + + G CRLFGI+L+ ++ E PVS+ + E ++ I
Sbjct: 528 --------VEKKQNSRNG--CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDT 574
Query: 543 AADSDG------KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
+ +SDI + +SP ESQS+Q RS TKV MQG+AVGR
Sbjct: 575 DFEQHSEPSNIHRSDIPS-ISCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGR 628
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
A+DLT YD L+ +LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV
Sbjct: 629 AVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMV 688
Query: 656 KRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 691
++IFI ++++VK++SP KLP+ GE L DS
Sbjct: 689 RKIFIYTTEEVKRLSPKIKLPL---GGEAKLSKPDS 721
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/666 (54%), Positives = 453/666 (68%), Gaps = 58/666 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV +P++G+ VYYFPQGHMEQLEAS +Q + ++PLF LPSKILC
Sbjct: 20 NDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEPQMPLFNLPSKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+ AE ETDEVYAQITLLPEP Q+E T+PDP + R VHSF K LTASDTST
Sbjct: 80 KVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVHSFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGVLATASHA+A
Sbjct: 200 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIA 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+SLNKYLE N+K +VGMR+KMRFEGE+ PERRFSGT+V
Sbjct: 260 TGTLFSVFYKPR--TSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGEEVPERRFSGTIV 317
Query: 315 GVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV D S W DS WRSLKVQWDEP+SI RP+RVS WE+EP VA+ TP+ QPV +NKR
Sbjct: 318 GVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVAT-TPSNSQPV-QRNKR 375
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
R P +PS + +L+ L + W S S++
Sbjct: 376 AR------PYVIPSPTA-----------DLSALGM------------W---KSPVESSAL 403
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
+Q + +SP + ++ N +++ +H+ P+ + D+ V
Sbjct: 404 SYGDSQRGRDLYSSPNFSTTAKVNSLGFRGNSQVAS-VSHNSMHWPNRVESVTDSFAPVV 462
Query: 494 --ETG-RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 550
++G R+ TG +LFGI+L+ ++ + S PV T + + +S A+SD S
Sbjct: 463 NKDSGERRQGTGIGYKLFGIQLVENSNTEGTS---PVVVSGTVVNDLPVLSLEAESDQHS 519
Query: 551 DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
+ K QE QS+Q RS TKV MQGVAVGRA+DLT Y+ L+
Sbjct: 520 EPEKSCLRSSQEL--------QSRQI-----RSCTKVHMQGVAVGRAVDLTQFKRYEDLL 566
Query: 611 DELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+LEEMFDI+G+L T KW++VYTD+E DMM VGDDPW+EFC MVK+IFI +S++VK++
Sbjct: 567 RKLEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRL 626
Query: 670 SPGSKL 675
SP KL
Sbjct: 627 SPKIKL 632
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/675 (52%), Positives = 449/675 (66%), Gaps = 59/675 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S+SD LYRELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAST+Q+L+Q +PLF LPSKI
Sbjct: 12 SSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L PE Q+EP++ DP P + + HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPETDQSEPSSADPEPHEPEKCNAHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLPPLDM Q+ P QELVAKDLH EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRG+NG+L VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T T+F V+YKPR T S+F++S+NKYLEA NNK +VGMR+KMRFEG+++PERRFSGT
Sbjct: 252 ISTGTLFSVFYKPR--TSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGDEAPERRFSGT 309
Query: 313 VVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
++GV + W DS WRSLKVQWDEP++I RPDRVSPWE+EP VA++ P K
Sbjct: 310 IIGVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQPPQPPARNKR 369
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
RP S + P P AQ+ + + L T E + + + S N
Sbjct: 370 ARPPASPSIAPEHPPVFGLWKSPGESAQTFSFSGLQRTQE-----LYPSSPNSIFSSSLN 424
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
F ++ + T P +F WP + + + ++
Sbjct: 425 IGFKTKNEPS----TLPNNQF----------------YWPIRDTRADSYSAS------ID 458
Query: 492 QVETGRKTE-TGTSCRLFGIELINHATSSAPSEKV-------PVSSLTTEGHIISTISAA 543
+V RK E T CRLFGIE+ + +++P V P +S+ E +S S
Sbjct: 459 KVPASRKQEPTTAGCRLFGIEIGSAVEATSPVVDVSGACHEQPAASVDIESDQLSQPSHV 518
Query: 544 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
SD + + SP E+QS+Q RS TKV M+G+AVGRA+DLT L
Sbjct: 519 NKSDAPAASSDR-----------SPYETQSRQV-----RSCTKVIMEGMAVGRAVDLTRL 562
Query: 604 VGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
GY+ L +LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVK+++I S
Sbjct: 563 HGYEDLHQKLEEMFDIQGELSASLKKWKLVYTDDEDDMMLVGDDPWSEFCSMVKKVYIYS 622
Query: 663 SQDVKKMSPGSKLPM 677
++ K ++P +KLP+
Sbjct: 623 YEEAKHLTPKAKLPV 637
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/683 (54%), Positives = 462/683 (67%), Gaps = 56/683 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 254 TGTLFSVFYKPR--TSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTII 311
Query: 315 GVEDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G+ SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L
Sbjct: 312 GIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL- 368
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
+NKR R PP A P S L + + +++ + + + S FS
Sbjct: 369 RNKRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFS 423
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
++S+ ++++ P + +Q F ++ D+K S S N T
Sbjct: 424 ASSHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTR 463
Query: 490 LEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 548
+E RK E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD
Sbjct: 464 VE-----RKQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQ 513
Query: 549 KSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
S + K + + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY
Sbjct: 514 ISQPSNGNKSDAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYG 568
Query: 608 HLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L +LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++
Sbjct: 569 DLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEA 628
Query: 667 KKMSPGSKLPMFSIEGEDILLSS 689
K ++P SKLP+ G+ I LSS
Sbjct: 629 KLLAPKSKLPVI---GDTIKLSS 648
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/683 (54%), Positives = 462/683 (67%), Gaps = 56/683 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 18 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 77
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 78 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 138 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 198 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 257
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 258 TGTLFSVFYKPR--TSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTII 315
Query: 315 GVEDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G+ SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L
Sbjct: 316 GIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL- 372
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
+NKR R PP A P S L + + +++ + + + S FS
Sbjct: 373 RNKRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFS 427
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
++S+ ++++ P + +Q F ++ D+K S S N T
Sbjct: 428 ASSHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTR 467
Query: 490 LEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 548
+E RK E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD
Sbjct: 468 VE-----RKQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQ 517
Query: 549 KSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
S + K + + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY
Sbjct: 518 ISQPSNGNKSDAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYG 572
Query: 608 HLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L +LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++
Sbjct: 573 DLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEA 632
Query: 667 KKMSPGSKLPMFSIEGEDILLSS 689
K ++P SKLP+ G+ I LSS
Sbjct: 633 KLLAPKSKLPVI---GDTIKLSS 652
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/684 (52%), Positives = 469/684 (68%), Gaps = 59/684 (8%)
Query: 8 LSQPSSN--SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
+ QP + +D LY+ELW ACAGPLV++P++G+RVYYFPQGHMEQLEAS +Q L ++P
Sbjct: 3 IGQPHTGGCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPS 62
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSK 125
F LPSKILC+VVN+ AE ETDEVYAQITLLP+P Q+E T+PD + R VHSF K
Sbjct: 63 FDLPSKILCKVVNVQRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLPEPERCTVHSFCK 122
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRR
Sbjct: 123 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRR 182
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGV
Sbjct: 183 HLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGV 242
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
LATASHA+AT T+F V+YKPR T S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ P
Sbjct: 243 LATASHAIATGTLFSVFYKPR--TSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVP 300
Query: 306 ERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 364
ERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ TP+
Sbjct: 301 ERRFSGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVAT-TPSNS 359
Query: 365 QPVLAKNKRPRLSMEVPPLDLPSAAS-APWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH 423
QPV +NKR R S+ D+ S P + A S+ Q
Sbjct: 360 QPV-QRNKRARPSVLPSTPDISSLGMWKPQTESTAFSYGDFQ------------------ 400
Query: 424 KHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK 483
+ D + NF + +++ + FS N +S +S + P+ +
Sbjct: 401 RGRDLYPSHNFSTSAKTN-------YLGFS---------GNSPLSGVSPNSLYR-PNRVE 443
Query: 484 PNNDTLLEQV--ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 540
D+ + + ++G + + +G RLFGI+L+ ++ + S + S + + + +
Sbjct: 444 SVTDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSNAEETSPLITTSGMVGDDRPVVSF 503
Query: 541 SAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
A +D +S+I E ++ ++ SP+E QS+Q RS TKV MQG+AV
Sbjct: 504 DAESDQHSEPSNINRSEIPSISCEPEKSCLR-SPQELQSRQI-----RSCTKVHMQGIAV 557
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCN 653
GRA+DLT Y+ L+ +LEEMFDI+G+L + KW++VYTDDE DMM+VGDDPWHEFC+
Sbjct: 558 GRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSKKWQVVYTDDEDDMMMVGDDPWHEFCS 617
Query: 654 MVKRIFICSSQDVKKMSPGSKLPM 677
MV++IFI +S++VK++SP SKLP+
Sbjct: 618 MVRKIFIYTSEEVKRLSPKSKLPV 641
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/393 (81%), Positives = 346/393 (88%), Gaps = 5/393 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVPK+G+RV+YFPQGHMEQLEASTNQELNQR+PLF LPSKILCR
Sbjct: 15 DDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCR 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V+N L+AEQETDEVYAQITLLPE Q E T+PDPCP++ PRP VHSF KVLTASDTSTH
Sbjct: 75 VINTQLLAEQETDEVYAQITLLPESDQIETTSPDPCPSEPPRPTVHSFCKVLTASDTSTH 134
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHA+ECLPPLDM Q PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 135 GGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 194
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRGENGEL VGVR +ARQQSSMPSSVISSQSMHLGVLATASHA++T
Sbjct: 195 VTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASHAIST 254
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
T+FVVYYKP RTSQFIISLNKYLEAVNNKFAVGMR+KMRFEGEDSPERRFSGT+VG
Sbjct: 255 LTLFVVYYKP----RTSQFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGTIVG 310
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
VEDFSPHW DSKWRSLKVQWDEPASI+RPDRVSPWEIEP VAS NL QPV KNKRPR
Sbjct: 311 VEDFSPHWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPVQPKNKRPR 370
Query: 376 LSMEVPPLDLPSAAS-APWSARLAQSHNLTQLS 407
+E+P + + S +PW + S L+ S
Sbjct: 371 PPIEIPAFAMEDSKSVSPWPVFVGYSTPLSSKS 403
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 31/222 (13%)
Query: 460 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 519
A++D+K++S WP G+STP SK ND + + GRK E TS RLFG +L+N +TSS
Sbjct: 379 AMEDSKSVSPWPVFVGYSTPLSSKSKNDPIPDPSNKGRKYEVPTSYRLFGFDLVNQSTSS 438
Query: 520 A-PSEKVP-----VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQS 573
+ P EKV VS T+G +++ + A DSD +K EQ
Sbjct: 439 SSPIEKVSAQPISVSRGATDGRVLAAL-PAVDSD-----------QKHEQSS-------- 478
Query: 574 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 633
TS RSRTKVQ+QG+AVGRA+DLT + GY LIDELE++FDIKGQLH R KWEIVY
Sbjct: 479 -----TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVY 533
Query: 634 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKL
Sbjct: 534 TDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKL 575
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/671 (53%), Positives = 452/671 (67%), Gaps = 53/671 (7%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LYRELW ACAGPLV +P++G+RVYYFPQGHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 24 TDALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 83
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+ AE ETDEVYAQITLLPEP NE T+PDP P + + VHSF K LTASDTST
Sbjct: 84 KVVNVQRRAEPETDEVYAQITLLPEPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 144 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGE GEL VGVR RQQ++MPSSVISS SMHLGVLATASHA+A
Sbjct: 204 FVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIA 263
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F ++YKPR T S+FI+S+NKYLEA +K +VGMR+KMRFEGE+ P+ FSG +V
Sbjct: 264 TGTLFSIFYKPR--TSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPDEGFSGIIV 321
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT---PNLVQPVLAK 370
GVED + W +S+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ T P QP +
Sbjct: 322 GVEDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPA-QR 380
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
NKR R PP+ LP+ A LSV W S S
Sbjct: 381 NKRAR-----PPV-LPTPAP--------------DLSVLG---------MW---KSPVES 408
Query: 431 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN---- 486
+ S +Q + SP KFS + N S+ A +G+S P++ N
Sbjct: 409 QAFSYSDSQHGRDLYLSP--KFSPATKANPLGFGGN-SSLAAVTGNSMYWPNRGENVMES 465
Query: 487 -DTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 545
++ + + ++ TG + +LFGI+L++++ S V +S+ + + ++ A ++
Sbjct: 466 FAPVVSKESSEKRQGTGNTYKLFGIQLVDNSNIEESSAAVTMSATVGDDRPVPSLDADSE 525
Query: 546 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
+ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT
Sbjct: 526 QHSEPSNIPSVSCDAEKSCLRSPQESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFDR 580
Query: 606 YDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
YD L+ LEEMFDI G+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI +++
Sbjct: 581 YDDLLKRLEEMFDIGGELSGATKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAE 640
Query: 665 DVKKMSPGSKL 675
+VK++SP KL
Sbjct: 641 EVKRLSPKIKL 651
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/682 (51%), Positives = 440/682 (64%), Gaps = 87/682 (12%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P LPS A+ P
Sbjct: 374 PR------PPGLPSPATGP----------------------------------------- 386
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAI-------DDNKNISA------WPAHSGHSTPH 480
SDG W + S LF NK+ WP ++ +
Sbjct: 387 ------SDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTNADSAAES 440
Query: 481 PSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEG 534
+ N+ E+ +T G CRLFG EL+ + ++++ S V V
Sbjct: 441 FASAFNNESTEKKQT-----NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSN 495
Query: 535 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
S + + +SDI + ++ ++ SP+ESQS+Q RS TKV MQG AV
Sbjct: 496 EFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAV 549
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCN 653
GRA+DLT Y+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC
Sbjct: 550 GRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCG 609
Query: 654 MVKRIFICSSQDVKKMSPGSKL 675
MV++IFI + ++VKK+SP +KL
Sbjct: 610 MVRKIFIYTPEEVKKLSPKNKL 631
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/670 (52%), Positives = 449/670 (67%), Gaps = 58/670 (8%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EP +PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA N K AVGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA+ TP+ P +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPP-QRNKR 372
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P L S +AP VTA+ W + SS
Sbjct: 373 PR------PPGLLSPTTAP------------STPVTADG-------VWKSPADNPSSVPL 407
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-GHSTPHPSKPNNDTLLEQ 492
F ++ L + F +I + WP H+ G + S NN++ E+
Sbjct: 408 FSPPAKTAAFGLG------GNKSFGVSIGS----AFWPTHADGAAESFASALNNESPTEK 457
Query: 493 VETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADS 546
+T G CRLFG EL+ + ++++ S V V S + + +
Sbjct: 458 KQT-----NGNVCRLFGFELVENMNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSESLN 512
Query: 547 DGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
++++ + ++ ++ SP++SQS+Q RS TKV MQG AVGRA+DLT Y
Sbjct: 513 INQANLPSGSGDHEKSSLR-SPQKSQSRQI-----RSCTKVHMQGSAVGRAVDLTRSECY 566
Query: 607 DHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++
Sbjct: 567 EDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEE 626
Query: 666 VKKMSPGSKL 675
VKK+SP +KL
Sbjct: 627 VKKLSPKNKL 636
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/675 (51%), Positives = 445/675 (65%), Gaps = 71/675 (10%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 374 PRLSMEVPPLDLPSAASAP------WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
PR P LPS A+ P W + ++ S A K +
Sbjct: 374 PR------PPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAAT 414
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
F N +S G + S + WP ++ + + N+
Sbjct: 415 FGHGGN-----KSFGVSIGS--------------------AFWPTNADSAAESFASAFNN 449
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTIS 541
E+ +T G CRLFG EL+ + ++++ S V V S
Sbjct: 450 ESTEKKQT-----NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQ 504
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
+ + +SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT
Sbjct: 505 SEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLT 558
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI
Sbjct: 559 RSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 618
Query: 661 CSSQDVKKMSPGSKL 675
+ ++VKK+SP +KL
Sbjct: 619 YTPEEVKKLSPKNKL 633
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/673 (52%), Positives = 446/673 (66%), Gaps = 64/673 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR P LPS A+ P S +T V W SS
Sbjct: 374 PR------PPGLPSPATGP-------SGPVTPDGV------------WKSPADTPSSVPL 408
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA----WPAHSGHSTPHPSKPNNDTL 489
F SP K + F + + +S WP ++ + + N+
Sbjct: 409 F------------SPPAKAA--TFGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNES 454
Query: 490 LEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAA 543
E+ +T G CRLFG EL+ + ++++ S V V S +
Sbjct: 455 TEKKQT-----NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSE 509
Query: 544 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
+ +SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT
Sbjct: 510 PLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRS 563
Query: 604 VGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
Y+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI +
Sbjct: 564 ECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYT 623
Query: 663 SQDVKKMSPGSKL 675
++VKK+SP +KL
Sbjct: 624 PEEVKKLSPKNKL 636
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 361/684 (52%), Positives = 453/684 (66%), Gaps = 67/684 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 254 TGTLFSVFYKPR--TSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTII 311
Query: 315 GVEDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G+ SP W DS W+SLKVQWDEP++I PDRVSPWE+EP AS P QP L
Sbjct: 312 GIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDAS-NPQPPQPPL- 368
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
+NKR R PP A P S L + + +++ + + + S FS
Sbjct: 369 RNKRAR-----PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFS 423
Query: 430 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 489
++S+ ++++ P + +Q F ++ D+K S S N
Sbjct: 424 ASSHVEFNSKNE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKAR 463
Query: 490 LEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 548
+E RK E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD
Sbjct: 464 VE-----RKQEPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSD- 512
Query: 549 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGY 606
Q+ ++S +S RS KV MQG+AVGRA+DLT L GY
Sbjct: 513 --------------QISQPSNGNKSDAPGTSSERSPLSPKVIMQGMAVGRAVDLTKLNGY 558
Query: 607 DHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L +LEEMFDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++
Sbjct: 559 GDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEE 618
Query: 666 VKKMSPGSKLPMFSIEGEDILLSS 689
K ++P SKLP+ G+ I LSS
Sbjct: 619 AKLLAPKSKLPVI---GDTIKLSS 639
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 351/673 (52%), Positives = 443/673 (65%), Gaps = 64/673 (9%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L ELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE QNEPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQNEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 374 PRLSMEVPPLDLPSAASAP---WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
PR P PSA P W + ++ S A K + F
Sbjct: 374 PRPPGLPSPTTGPSAPVTPDGVWKSPADTPSSVPLFSPPA-------------KAATFGH 420
Query: 431 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTL 489
N +S G + S + WP+H+ + S NN++
Sbjct: 421 GGN-----KSFGVSIGS--------------------AFWPSHADSAAESFASAFNNES- 454
Query: 490 LEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAA 543
T +K G CRLFG EL+ + ++++ S V V S +
Sbjct: 455 -----TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSE 509
Query: 544 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
+ +SDI + + ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT
Sbjct: 510 PLNINQSDIPSGSDDPENSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAVDLTRS 563
Query: 604 VGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
Y+ L +LEEMF+IKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI +
Sbjct: 564 ECYEDLFKKLEEMFEIKGELLKSTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYT 623
Query: 663 SQDVKKMSPGSKL 675
++VKK+SP +KL
Sbjct: 624 PEEVKKLSPKNKL 636
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 349/675 (51%), Positives = 444/675 (65%), Gaps = 71/675 (10%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L RELW ACAGPLV +P++G+RVYYFP+GHMEQLEAS +Q L Q++P F LPSKILC
Sbjct: 16 SDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+V+NI AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST
Sbjct: 76 KVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSVLR+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS
Sbjct: 136 QGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+V
Sbjct: 256 TGTIFSVFYKPR--TSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIV 313
Query: 315 GV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373
Query: 374 PRLSMEVPPLDLPSAASAP------WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
PR P LPS A+ P W + ++ S A K +
Sbjct: 374 PR------PPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAAT 414
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
F N +S G + S + WP ++ + + N+
Sbjct: 415 FGHGGN-----KSFGVSIGS--------------------AFWPTNADSAAESFASAFNN 449
Query: 488 TLLEQVETGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTIS 541
E+ +T G CRLFG EL+ + ++++ S V V S
Sbjct: 450 ESTEKKQT-----NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQ 504
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
+ + +SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT
Sbjct: 505 SEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLT 558
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y+ L +LEEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI
Sbjct: 559 RSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 618
Query: 661 CSSQDVKKMSPGSKL 675
+ ++VKK+SP +KL
Sbjct: 619 YTPEEVKKLSPKNKL 633
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 358/675 (53%), Positives = 448/675 (66%), Gaps = 57/675 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T T+F V+YKPR T S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSGT
Sbjct: 252 ISTGTLFSVFYKPR--TSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGT 309
Query: 313 VVGV----EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
++G+ + + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L
Sbjct: 310 IIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LDRTNPQPPQPPL 368
Query: 369 -AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
K RP S + P P A AQ+ + + L T E +H
Sbjct: 369 RNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPS 419
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
+S+ V F+ + E N N W + + + N
Sbjct: 420 SMFSSSL--------------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN-- 461
Query: 488 TLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISA 542
+ T +K E+ TS CRLFGIE+ + A S PV ++ + GH ++ A
Sbjct: 462 ----KAPTEKKQESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDA 510
Query: 543 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 602
+D + A + + SP E++S+Q+ RS TKV MQGVAVGRA+DLT
Sbjct: 511 ESDQLSQPSHANKATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTR 565
Query: 603 LVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
L GYD L +LEEMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I
Sbjct: 566 LDGYDDLRRKLEEMFDIPGELSASLKKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIY 625
Query: 662 SSQDVKKMSPGSKLP 676
S ++ K ++P +KLP
Sbjct: 626 SYEEAKSLTPKAKLP 640
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 341/584 (58%), Positives = 415/584 (71%), Gaps = 21/584 (3%)
Query: 102 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
Q+EP + DP P + R V F K+LTASDTSTHGGFSVLRKHA ECLPPLDM+QSTPTQ
Sbjct: 1 QSEPQSADPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQ 60
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
EL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGV
Sbjct: 61 ELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGV 120
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
R ARQQS MPSSVISS SMHLGVLATASHAV TQT FVVYYKP RTSQFIISLNKY
Sbjct: 121 RRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKP----RTSQFIISLNKY 176
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASI 341
LE V N + VGMR+KMRFEGE+SPERRF+GT+VGV D SP W DSKWRSLK+QWDEPA+I
Sbjct: 177 LETVKNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATI 236
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP--SAASAPWSARLAQ 399
RP+RVSPWEIEPFV SA+ N P + K+KR R +E+PP ++ SA S W
Sbjct: 237 QRPERVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEVTSGSAPSGFWLQGSTI 294
Query: 400 SHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTSPRVKFSQQLFQ 458
SH ++QLS T E + +N V W SNS+ + + +G W SP + S L+
Sbjct: 295 SHEISQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIW-PSPPLNISLNLYP 353
Query: 459 EAIDDNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTETGTSCRLFGIELINHA 516
++ + + + P S +S+ SKP++D + +Q+E G K + CR+FGI+L N+
Sbjct: 354 DSTFERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNC 413
Query: 517 TSSAPSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 571
+ E+ + V+ E + + ++ D+ S +KE +Q ++ K +
Sbjct: 414 SIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE----QQLSTELLTKGT 469
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 631
Q+K S+R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE +F+IKG+L KW I
Sbjct: 470 QTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSI 529
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
V+TDDE DMMLVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 530 VFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 573
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 355/675 (52%), Positives = 445/675 (65%), Gaps = 58/675 (8%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHG SVLR+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 190
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA
Sbjct: 191 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 250
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T T+F V+YKPR T S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSG
Sbjct: 251 ISTGTLFSVFYKPR--TSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGI 308
Query: 313 VVGV----EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
++G+ + + W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L
Sbjct: 309 IIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LNRTNPQPPQPPL 367
Query: 369 -AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
K RP S + P P A AQ+ + + L T E +H
Sbjct: 368 RNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPS 418
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
+S+ V F+ + E N N W + + + N
Sbjct: 419 SMFSSSL--------------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN-- 460
Query: 488 TLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISA 542
+ T +K E+ TS CRLFGIE+ + A S PV ++ + GH ++ A
Sbjct: 461 ----KAPTEKKQESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDA 509
Query: 543 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 602
+D + A + + SP E++S+Q+ RS TKV MQGVAVGRA+DLT
Sbjct: 510 ESDQLSQPSHANKATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTR 564
Query: 603 LVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
L GYD L +LEEMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I
Sbjct: 565 LDGYDDLRRKLEEMFDIPGELSASLNKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIY 624
Query: 662 SSQDVKKMSPGSKLP 676
S ++ K ++P +KLP
Sbjct: 625 SYEEAKSLTPKAKLP 639
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 346/700 (49%), Positives = 446/700 (63%), Gaps = 85/700 (12%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
AN G + P +++++ LY+ELW ACAGPLV VP++G+RVYYFPQGHMEQLEAST+Q ++
Sbjct: 6 ANHFGGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVD 65
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
Q +P F LP+KILC+V+N+ L AE ETDEVYAQITLLPEP Q E T+PDP + + V
Sbjct: 66 QHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITSPDPPLPEPEKCTV 125
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA DLHG EW F+HIFR
Sbjct: 126 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFR 185
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS FV++K+LVAGD F+FLRG++GEL VGVR L RQ ++MPSSVISS S
Sbjct: 186 GQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHS 245
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
MHLGVLATASHA+ T T+F V+YKPR T S+FI+S+NKYLEA N+K +VGMR+KMRFE
Sbjct: 246 MHLGVLATASHAIMTGTLFSVFYKPR--TSQSEFIVSVNKYLEARNHKLSVGMRFKMRFE 303
Query: 301 GEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
GE+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RPDRVSPW++EP VA A
Sbjct: 304 GEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVA-A 362
Query: 360 TPNLVQPVLAKNKR-------------PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQL 406
TP QP +NKR P L M P+D PS+ S +R + +L
Sbjct: 363 TPTNTQPP-QRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSPKL 421
Query: 407 SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 466
S A K + N + T++ ++ + +
Sbjct: 422 SSAA-------------KGLGYGENGSMPLSTKT---------------MYWSSQSETCT 453
Query: 467 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS----SAPS 522
S PA +P N L +E L I+ ++S SA
Sbjct: 454 ESVAPASE-------KRPANGCRLFGIE------------LLDCPTIDESSSVAMPSAVV 494
Query: 523 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 582
E PV SL + SD S+ + E + S + + QS +
Sbjct: 495 EDQPVPSLNVD------------SDRNSEPSNPIPSVSCEPEKSSLRSTHESQSKQIRSC 542
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMM 641
++ +Q + V GRA+DLT L Y+ L+ +LE MF+I+G+L T KW++VYTDDE DMM
Sbjct: 543 TKVHMQGKAV--GRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTKKWQVVYTDDEDDMM 600
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 681
+VGDDPWH FC+MV++I++ ++++ KK+SP KLP+ ++
Sbjct: 601 MVGDDPWHGFCSMVRKIYVYTAEEAKKLSPKIKLPVVDVK 640
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 340/676 (50%), Positives = 427/676 (63%), Gaps = 75/676 (11%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+ ELW ACAGPL+ VP+QG+RVYYFPQGH+EQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 68 SDALFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILC 127
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L E ++DEVYAQI L P+ Q+E T+ P P + R +HSF K LTASDTST
Sbjct: 128 SVVNVELRTEADSDEVYAQIMLQPQDEQSELTSAGP-PQELERGTIHSFCKTLTASDTST 186
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 187 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWSV 246
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRG NGEL VGVR RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 247 FVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHAIS 306
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+F++S+NKYLEA +VGMR+KM+FEG+++ ERRFSGT+V
Sbjct: 307 TGTLFSVFYKPR--TSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIV 364
Query: 315 GVEDF----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
G+ S W DS W+SLKVQWDEP+SI RPDRVS WE+EP + SA P +P L +
Sbjct: 365 GMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEP-LDSANPQTPEPPL-R 422
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
NKR R L S + P D
Sbjct: 423 NKRARA--------LASPSVVP----------------------------------DLPP 440
Query: 431 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS----AWPAHSGHSTPHPSKPNN 486
N + L+ + +++LF +I + N+ WP + + N
Sbjct: 441 NFGLWKSPSEPSQTLSFSEPQRARELFPTSIFSSTNVMFDQFYWPGRETKDGSYAASTN- 499
Query: 487 DTLLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAA 544
+V RK E T+ CRLFGIE+ SS E PV + + H + S
Sbjct: 500 -----KVTAERKHEPTTTGGCRLFGIEI-----SSTVEETQPVVTASVGDHDQTAASVDM 549
Query: 545 DSDGKSDIAK-EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
DS S + + + + E+QS+Q RS TKV M+G+AVGRA+DL L
Sbjct: 550 DSSVLSQPSNINNSDAPAGSSERALLETQSRQV-----RSCTKVIMKGMAVGRAVDLARL 604
Query: 604 VGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
GY L +LEEMFDI G+L T +W++VY DDE DMMLVGDDPW EFC MVKRI+I S
Sbjct: 605 DGYGDLHRKLEEMFDIHGELCSTLKRWQVVYADDEDDMMLVGDDPWDEFCGMVKRIYIYS 664
Query: 663 SQDVKKMSPGSKLPMF 678
++ K+++P +K P+
Sbjct: 665 YEEAKQLAPKAKTPVI 680
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/376 (82%), Positives = 333/376 (88%), Gaps = 4/376 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
DDLY ELWKACAGPLVDVPK+G+RV+YFPQGHMEQLEASTNQELNQR+PLF LPSKILCR
Sbjct: 1 DDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCR 60
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V++ L+AEQ+TDEVYAQITL+PE Q EPT+PD ++ PRP VHSF KVLTASDTSTH
Sbjct: 61 VIHTQLLAEQDTDEVYAQITLIPESDQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTH 120
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLRKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 121 GGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 180
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
VTSKRLVAGD+FVFLRGENGEL VGVR +A QQSSMPSSVISSQSMHLGVLATASHAV+T
Sbjct: 181 VTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVST 240
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
T+FVVYYKP RTSQFIISLNKYLEAV+NKF VGMR+KMRFEGEDSP+RRFSGT+VG
Sbjct: 241 LTLFVVYYKP----RTSQFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVG 296
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
VEDFSPHW DSKWRSLKVQWDEPA I RPDRVSPWEIEP VAS NL QPV KNKRPR
Sbjct: 297 VEDFSPHWNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPR 356
Query: 376 LSMEVPPLDLPSAASA 391
E+P L + S+
Sbjct: 357 PPFEIPALGYSTPLSS 372
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 144/195 (73%), Gaps = 22/195 (11%)
Query: 475 GHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEG 534
G+STP SK ND +L+ + GRK+E TS RLFGI+L+NH++SS P E VP ++
Sbjct: 365 GYSTPLSSKSKNDAILDPSDKGRKSEVPTSYRLFGIDLVNHSSSSTPIE-VPAQLMS--- 420
Query: 535 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
I ++S KE+K EQ+Q SPKE QSKQS TS RSRTKVQMQG+AV
Sbjct: 421 --ICSVS---------------KEQKPEQLQKSPKEIQSKQSS-TSTRSRTKVQMQGIAV 462
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 654
GRA+DLT L GY LIDELE++FDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNM
Sbjct: 463 GRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNM 522
Query: 655 VKRIFICSSQDVKKM 669
V+RI+ICSSQDVK+M
Sbjct: 523 VRRIYICSSQDVKRM 537
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 336/697 (48%), Positives = 448/697 (64%), Gaps = 63/697 (9%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 14 ELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 73
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 74 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T ++F+VYY+PR+ SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+V
Sbjct: 254 TNSIFLVYYRPRL--SQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIV 311
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNK 372
G D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ KNK
Sbjct: 312 GEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNK 370
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSN 431
RPR E L A W + + Q H T + ++E I H V W +H + +
Sbjct: 371 RPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAV 429
Query: 432 SNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH 480
S+ + + E WL SP + + SQ++FQ + I+ WPA S +
Sbjct: 430 SSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEE 488
Query: 481 PSK-----------------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE 523
P+ PN ++E G+K RLFG++L+ +
Sbjct: 489 PTSKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS------ 536
Query: 524 KVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCL 578
+S+ T + + A+A G + + + F + +E + SP+E QS Q+
Sbjct: 537 ---ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN-- 591
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 638
+ R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEG
Sbjct: 592 YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEG 648
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
D M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 649 DTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 336/697 (48%), Positives = 448/697 (64%), Gaps = 63/697 (9%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 10 ELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 69
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 70 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 129
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 130 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 189
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 249
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T ++F+VYY+PR+ SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+V
Sbjct: 250 TNSIFLVYYRPRL--SQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIV 307
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNK 372
G D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ KNK
Sbjct: 308 GEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNK 366
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSN 431
RPR E L A W + + Q H T + ++E I H V W +H + +
Sbjct: 367 RPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAV 425
Query: 432 SNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH 480
S+ + + E WL SP + + SQ++FQ + I+ WPA S +
Sbjct: 426 SSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEE 484
Query: 481 PSK-----------------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE 523
P+ PN ++E G+K RLFG++L+ +
Sbjct: 485 PTSKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS------ 532
Query: 524 KVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCL 578
+S+ T + + A+A G + + + F + +E + SP+E QS Q+
Sbjct: 533 ---ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN-- 587
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 638
+ R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEG
Sbjct: 588 YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEG 644
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
D M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 645 DTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 681
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/682 (48%), Positives = 444/682 (65%), Gaps = 47/682 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+VVN+ L AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 KVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 129
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 130 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 189
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 TFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAI 249
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T ++F+VYY+PR+ SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTV
Sbjct: 250 RTHSIFLVYYRPRL--SQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTV 307
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKN 371
V D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KN
Sbjct: 308 VDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKN 366
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KRPR + E + A W + + H T +S ++E K + VAW + + +S+
Sbjct: 367 KRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAM 422
Query: 432 SNFMSRTQS-DGEWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP- 481
S+ + + + G W + P + + SQ+LFQ +D + + WP S + P
Sbjct: 423 SSSICQNSAVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPS 481
Query: 482 SKPNNDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 529
SK + +T L +T K E G RLFG+ LINHA SSA ++K V +
Sbjct: 482 SKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGA 540
Query: 530 LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 589
T + DS S + K+ V SP+E QS QSC S RSR KVQM
Sbjct: 541 GETSARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQM 591
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDP 647
G V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG P
Sbjct: 592 HGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVP 650
Query: 648 WHEFCNMVKRIFICSSQDVKKM 669
W EFC MV++I I S D M
Sbjct: 651 WQEFCQMVRKIVIHSIGDRGHM 672
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 335/697 (48%), Positives = 447/697 (64%), Gaps = 63/697 (9%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ LW+ACAGPLV+VP++ +RV+YF QGH+EQL+ T+ L ++I +F++P KILC+
Sbjct: 14 ELFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCK 73
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTST
Sbjct: 74 VVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 134 HGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 194 FVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 253
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T ++F+VYY+PR+ SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+V
Sbjct: 254 TNSIFLVYYRPRL--SQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIV 311
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNK 372
G D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ KNK
Sbjct: 312 GEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNK 370
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSN 431
RPR E L A W + + Q H T + ++E I H V W +H + +
Sbjct: 371 RPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAV 429
Query: 432 SNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH 480
S+ + + E WL SP + + SQ++FQ + I+ WPA S +
Sbjct: 430 SSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEE 488
Query: 481 PSK-----------------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE 523
P+ PN ++E G+K RLFG++L+ +
Sbjct: 489 PTSKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS------ 536
Query: 524 KVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCL 578
+S+ T + + A+A G + + + F + +E + SP+E QS Q+
Sbjct: 537 ---ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN-- 591
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 638
+ R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEG
Sbjct: 592 YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEG 648
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
D M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 649 DTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/682 (48%), Positives = 443/682 (64%), Gaps = 47/682 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+VVN+ L AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 KVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 129
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 130 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 189
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 190 TFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAI 249
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T ++F+VYY+PR+ SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTV
Sbjct: 250 RTHSIFLVYYRPRL--SQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTV 307
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKN 371
V D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KN
Sbjct: 308 VDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKN 366
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KRPR + E + A W + + H T +S ++E K + VAW + + +S+
Sbjct: 367 KRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAM 422
Query: 432 SNFMSRTQS-DGEWLTS-------PRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP- 481
S+ + + + G W P + + SQ+LFQ +D + + WP S + P
Sbjct: 423 SSSICQNSAVTGSWFKGFNSSGSLPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPS 481
Query: 482 SKPNNDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 529
SK + +T L +T K E G RLFG+ LINHA SSA ++K V +
Sbjct: 482 SKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGA 540
Query: 530 LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 589
T + DS S + K+ V SP+E QS QSC S RSR KVQM
Sbjct: 541 GETSARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQM 591
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDP 647
G V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG P
Sbjct: 592 HGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVP 650
Query: 648 WHEFCNMVKRIFICSSQDVKKM 669
W EFC MV++I I S D M
Sbjct: 651 WQEFCQMVRKIVIHSIGDRGHM 672
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 352/727 (48%), Positives = 446/727 (61%), Gaps = 90/727 (12%)
Query: 9 SQPSSN----SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
S+PS+ +D LY ELW ACAGPLV VP+ G +V+YFPQGH EQ+E STNQ +Q +P
Sbjct: 29 SEPSAGFRDANDGLYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMP 88
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP--RPKVHS 122
+ LPSKILCRVVN+ L AE +TDEVYAQ+TL+PEP+Q+E TT + SP RP V+S
Sbjct: 89 NYDLPSKILCRVVNVWLKAEPDTDEVYAQLTLIPEPNQDE-TTLEKETVQSPPRRPHVYS 147
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLP LDM+Q PTQELVAKDLHG EWRF+HIFRGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQ 207
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ++MP+SVISS SMH
Sbjct: 208 PRRHLLTTGWSAFVSSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMH 267
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLATA HA +T TMF V+Y+PR T S+F+I ++Y+E+V N +++GMR++MRFEGE
Sbjct: 268 LGVLATAMHAFSTGTMFSVFYRPR--TSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGE 325
Query: 303 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
++PE+RF+GT+VGVED+ S W SKWR LKVQWDE +S+ RP RVSPW+IEP SA P
Sbjct: 326 ETPEQRFTGTIVGVEDYDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEP---SAAP 382
Query: 362 NLVQ-PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRI-DNHV 419
+ P + + KRPR ++PS + +R +T+ S +
Sbjct: 383 TAINPPPIPRAKRPR-------TNVPSPSDVSHLSREGLPRGMTEHSQPPRYPGVLQGQE 435
Query: 420 AWHHKHSDFSSNSNFMSRTQSDGEWLT------------SPRVKFSQQLFQEAIDDNKNI 467
FSS +N Q W P + L E+ KN
Sbjct: 436 GMALVGGPFSSGTNNPQSHQKSSMWAPPLLPPKEDPYPHPPHPNWMSLLRSESPFTGKNP 495
Query: 468 SAWPAHSGHSTPHPSK----PNNDTLL----EQVETGRKTETGTSCRLFGIELINHATSS 519
P+H P P + P LL +Q G ++G C+LFGI L H T
Sbjct: 496 ---PSHWA-PFPFPGEKAWPPLGPALLVGREDQKPLGGGLQSG-GCKLFGINLFEHQTEV 550
Query: 520 A-------PSEKVPVSSLTT------EGHIISTISAA----ADSDGKSDIAKEFKEKKQE 562
A PS L T EG +S S AD+ G +D
Sbjct: 551 ASHGIAGFPSRGQQQVVLRTPPPVGLEGDQVSEQSKGGGKSADTGGDTD----------- 599
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
+ P ++QS TS RS TKV MQG A+GR++DLT GY L+ EL+ MF +G+
Sbjct: 600 --RPLPHKAQS-----TSTRSCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGE 652
Query: 623 LHTRTK-WEIVYTDDEGDMMLVGDDPWHEF---CNMVKRIFICSSQDVKKMSPGSKLPMF 678
L K W++VYTDDEGDMMLVGDDPW + C MV++I+I + ++V++M P S
Sbjct: 653 LMDPMKGWQVVYTDDEGDMMLVGDDPWQRYREXCVMVRKIYIYTREEVQRMRPRS----M 708
Query: 679 SIEGEDI 685
S +G D+
Sbjct: 709 SQKGHDV 715
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 334/672 (49%), Positives = 437/672 (65%), Gaps = 42/672 (6%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCR 75
+L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L +I +F++P+KILC+
Sbjct: 8 ELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNKILCK 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ETDE+YAQITL PEP Q + PT PDP ++ RP VHSF K+LT SDTST
Sbjct: 68 VVNVELKAETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPSDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 128 HGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FVTSK+L+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+
Sbjct: 188 FVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 247
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T ++F+VYY+PR+ SQ+I+SLNKYLE+ F VGMR+KM FEGED P ++FSGTVV
Sbjct: 248 TNSIFLVYYRPRL--SQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVKKFSGTVV 305
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL---VQPVLAKN 371
D SPHW+ S W++LKV+WDE + P+RVS WEIEPF ASA P + VQP + KN
Sbjct: 306 DKGDLSPHWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASA-PAINIPVQPSM-KN 363
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KRPR + E + A W + + H T +S + + VAW + +S+
Sbjct: 364 KRPRETAESLDIHALEPAQEFWLSGRPEQHK-TSISSNEPNCISVHQVAWTSERPGYSAM 422
Query: 432 SNFMSRTQS-DGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH 480
S+ + + + G W SP + + SQ+LFQ +D + + WP S +
Sbjct: 423 SSSICQNSAVIGSWFKDFNSSSKGASPSLPEISQKLFQVTSNDAR-VPPWPGLSAYQAEE 481
Query: 481 -PSKPNNDTLLEQVET-----------GRKTETGTSCRLFGIELINHATSSAPSEKVPVS 528
SK + +T L +T K E G RLFG+ L+NH SS ++K+ V
Sbjct: 482 LSSKLSCNTALCSYQTEEVAPKFSIAVEEKKEPGM-FRLFGVNLVNHTRSSGIADKMTVG 540
Query: 529 SLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 588
T + + S + K+ E SP+E QS QSC S R+R KVQ
Sbjct: 541 VGETSMRGAGSFEDSGQLSALSRVTKDHTHLVNE----SPREIQSHQSC--SGRNRIKVQ 594
Query: 589 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
M G AVG+A+DL L GY L+ ELEEMF+IK L ++ +W++ +T+DE D M VG W
Sbjct: 595 MHGHAVGKAVDLGNLDGYVQLMGELEEMFEIK-DLGSKEEWKVTFTNDENDTMEVGAVLW 653
Query: 649 HEFCNMVKRIFI 660
EFC MV++I I
Sbjct: 654 QEFCQMVRKIVI 665
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/363 (76%), Positives = 309/363 (85%), Gaps = 4/363 (1%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D+L +ELW+ CAGPLVDVPK +RVYYFPQGHMEQLEASTNQELNQ IPLF L KI
Sbjct: 23 SGEDELCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKI 82
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LCRV++I L+AEQ++DEVYAQI LLPE Q EPT+PD + PRPKVH F KVLTASDT
Sbjct: 83 LCRVLHIQLLAEQDSDEVYAQIALLPEADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDT 142
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+LRKHA ECLPPLDM Q+TP QELVAKDLHG+EW FKHIFRGQPRRHLLTTGW
Sbjct: 143 STHGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGW 202
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
STFV+SKRLV GD+FVFLR GE+ +G+R LARQ SSMP SVISSQSMHLGVLATASHA
Sbjct: 203 STFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHA 262
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
V TQTMFVVYYKP RTSQFII LNKYLEAV ++++VGMR+KM+FEGE+ PE+RF+GT
Sbjct: 263 VTTQTMFVVYYKP----RTSQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKRFTGT 318
Query: 313 VVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
+VGVED S WKDSKWRSLKVQWDEPAS+ RPDRVSPW+IEPFVAS LV P+ KNK
Sbjct: 319 IVGVEDSSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNK 378
Query: 373 RPR 375
R R
Sbjct: 379 RHR 381
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 328/708 (46%), Positives = 449/708 (63%), Gaps = 63/708 (8%)
Query: 7 SLSQPSSNSD-DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIP 64
+++QP D +L+ ELW+ACAGPLV+VP++G+RV+YF QGH+EQL+ T+ L ++I
Sbjct: 58 AMAQPGRGRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIK 117
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSF 123
+F++P KILC+VVN+ L AE ETDEVYAQITL P+ Q++ P DP ++PRP VH+F
Sbjct: 118 MFQVPYKILCKVVNVELKAETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTF 177
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K+LT SDTSTHGGFSVLR+HA ECLPPLDM TPTQE+++KDLHG EWRFKHI+RGQP
Sbjct: 178 CKILTPSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQP 237
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWSTFVTSK+L+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHL
Sbjct: 238 RRHLLTTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHL 297
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
GVLA+ASHA+ T ++FVVYY+PR+ SQ+I+S+NKY A F VGMR++M FE ED
Sbjct: 298 GVLASASHAIKTNSIFVVYYRPRL--SQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAED 355
Query: 304 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--AT 360
P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 356 VPVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAI 415
Query: 361 PNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRID-- 416
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 416 STLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGS 471
Query: 417 --NHVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQEA 460
+ + W +H+ + + +S+ + +T DG W SP + + +Q+L + A
Sbjct: 472 GYHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRVA 530
Query: 461 IDDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTSC 505
+ + W G+ P+ P L EQV + K +
Sbjct: 531 SSEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMV 590
Query: 506 RLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 563
RLFG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 591 RLFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE----- 645
Query: 564 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 623
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 646 ---SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK--- 697
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 698 DIKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 745
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/649 (48%), Positives = 408/649 (62%), Gaps = 85/649 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EA T +ELN+ P+F LPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIFDLPSKLQCRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E+ +DE YA+ITL+P+ PT D + RP V+SF+KVLTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPDTQVVIPTQND----NHYRPLVNSFTKVLTASDTSVHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLT+GW+ F T
Sbjct: 141 FSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNAFTT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGD VFLRGE GEL VG+R QQ ++ SS+IS SM GV+A+A HA Q
Sbjct: 201 SKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVHAFNNQC 260
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MF+V YKP R+SQFI+S NK+++AVNNKF VG R+ MRFEGED ERR+SGT++GV
Sbjct: 261 MFIVVYKP----RSSQFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSERRYSGTIIGVN 316
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
+FS HW +S+WRSL+V+WDE AS RPD+VSPW+IE S N+++P L KNKR R
Sbjct: 317 NFSSHWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLTPSL--NVLRPSLLKNKRSREV 374
Query: 378 MEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 437
E+ S +S L Q + + S+T S + F+S
Sbjct: 375 NEI-----GSTSSHLLHPILTQGQEIGEPSMT-------------------SPMNVFLS- 409
Query: 438 TQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKP----NNDTLLEQV 493
+ + I+D++ P+ S P+ P NND ++ +
Sbjct: 410 -------------------YCDEIEDDET----PSRMLMSYHVPTMPKLNYNNDQMVTPI 446
Query: 494 ETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 553
E T S RLFG+ L ATSS K P+ + +S KS+I+
Sbjct: 447 EENITTNANASFRLFGVSL---ATSSVI--KDPIEPM--------------ESYPKSEIS 487
Query: 554 KEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
K +EKK Q SP+E QSKQ +S RS TKVQMQGV VGRALDL L GYDHLI
Sbjct: 488 KLCQEKKLGLGQTITSPREIQSKQ--FSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLII 545
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
ELE++FD+ GQL TR +W+I + D+EG+ LVGD+PW EFC+MVK+IFI
Sbjct: 546 ELEKLFDLNGQLQTRNQWKIAFKDNEGNEKLVGDNPWPEFCSMVKKIFI 594
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/653 (47%), Positives = 412/653 (63%), Gaps = 81/653 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 36 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 96 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 151
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 152 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 211
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 212 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 271
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
+F+V YKP I R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV
Sbjct: 272 CIFIVVYKPSI--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGV 329
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R
Sbjct: 330 SDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLRE 387
Query: 377 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 436
E S++S L Q + QLSV +S N
Sbjct: 388 VNE-----FGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISL 422
Query: 437 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 496
R + E A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 423 RYRDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEEN 462
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
T+ GT+ RLFG+ L + P K P+ + SDI+K
Sbjct: 463 ITTKAGTNFRLFGVTL-----DTPPMIKDPIKQIG------------------SDISKLT 499
Query: 557 KEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
+ KK Q Q SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE
Sbjct: 500 ERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELE 557
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
++FDIKGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 558 KLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 309/653 (47%), Positives = 411/653 (62%), Gaps = 83/653 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 140 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 199
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 259
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
+F+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV
Sbjct: 260 CIFIVVYKP----RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGV 315
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R
Sbjct: 316 SDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLRE 373
Query: 377 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 436
E S++S L Q + QLSV +S N
Sbjct: 374 VNE-----FGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISL 408
Query: 437 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 496
R + E A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 409 RYRDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEEN 448
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
T+ GT+ RLFG+ L + P K P+ + SDI+K
Sbjct: 449 ITTKAGTNFRLFGVTL-----DTPPMIKDPIKQI------------------GSDISKLT 485
Query: 557 KEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
+ KK Q Q SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE
Sbjct: 486 ERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELE 543
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
++FDIKGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 544 KLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 305/657 (46%), Positives = 413/657 (62%), Gaps = 82/657 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF V +KHA ECLPPLDM+Q P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFT 199
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQ 259
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
+F+V YKP R+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV
Sbjct: 260 CIFIVVYKP----RSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGV 315
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R
Sbjct: 316 NDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLRE 373
Query: 377 SME----VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
++E + L S++S L Q + QLSV + N+
Sbjct: 374 TLEYLLNILVLYTCSSSSHILPPILTQGQEIGQLSVAS------------------PMNT 415
Query: 433 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ 492
+ R + ++A++ ++ + ++P P P N+ ++ Q
Sbjct: 416 SLRYRDTT-----------------EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQ 453
Query: 493 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 552
+E T+ T+ RLFG+ L P E++ SDI
Sbjct: 454 IEENITTKAVTNFRLFGVSLAIPLVIKDPIEEI-----------------------GSDI 490
Query: 553 AK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
+K E K+ Q Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI
Sbjct: 491 SKLTEGKKFGQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLI 548
Query: 611 DELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
ELE++FD+KGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 549 LELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 303/651 (46%), Positives = 406/651 (62%), Gaps = 93/651 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTG
Sbjct: 135 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ G
Sbjct: 255 AFDNQCMFIVVYKP----RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFG 310
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KN
Sbjct: 311 TIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKN 368
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KR R E S++S L Q + QLSV + N
Sbjct: 369 KRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSVAS------------------PMN 405
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
+ + R ++ +A++ ++ + ++P P P + N+ ++
Sbjct: 406 ISLLYRETTE-----------------DAMNPSRLLMSYPVQ-----PMPKRNYNNQMVT 443
Query: 492 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
Q+E T+ GT+ RLFG+ L ++ P K P+ + SD
Sbjct: 444 QIEENITTKAGTNFRLFGVSL-----ATPPVIKDPIEQI------------------GSD 480
Query: 552 IAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
I+K E K+ Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD L
Sbjct: 481 ISKLTEGKKFGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQL 538
Query: 610 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
I ELE++FD+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 539 ILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 323/697 (46%), Positives = 442/697 (63%), Gaps = 54/697 (7%)
Query: 11 PSSNSD-DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE-LNQRIPLFRL 68
P D +L+ ELW+ACAGPLV++P+ GQRV+YF QGH+EQ++ ++Q+ L +I +F++
Sbjct: 3 PGGGRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQV 62
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVL 127
P KILCRVVN+ L AE ET+EVYAQITLLPE Q P++PDP + RP VHSFSK+L
Sbjct: 63 PYKILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKIL 122
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
T SDTSTHGGFSVLR+HA ECLPPLDM+ TPTQEL+ KD+ G EWRFKHI+RGQPRRHL
Sbjct: 123 TPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHL 182
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWSTFVTSK+LV GD FV+LR E GE VGVR +++++MPSSV+SSQSMHLGVLA
Sbjct: 183 LTTGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLA 242
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+ASHA+ T+++F+VYY+PR+ SQ+I+++NKY ++ VG+R+KM FEGE+ P +
Sbjct: 243 SASHALQTKSIFLVYYRPRV--SQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVPVK 300
Query: 308 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
+FSGT+VG SP W S+W+S KVQWD+PA+ P+RVSPWEIEP +A+ + +
Sbjct: 301 KFSGTIVGDGALSPQWSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVP 360
Query: 368 L---AKNKRPRLSMEVPPLDLPSAASAPWSARLA---QSHNLTQLSVTAEDKRI-DNHVA 420
L +NKRPR + E LDL S L+ + H+ + ++ I N V
Sbjct: 361 LQSSIRNKRPRETTE--DLDLQSLNPTTQEFSLSGMPRQHDKIGDGPSNPNRMIPGNQVI 418
Query: 421 W-HHKHSDFSS--NSNFMSRTQSDGEWL---------TSPRV-KFSQQLFQEAIDDNKNI 467
W + + +S+ +S+F + WL SP + + SQ+L+Q +D +
Sbjct: 419 WPGERAAGYSAVGSSSFCQKPLVRESWLEEFNLSRQAMSPTLSEISQKLYQVTRNDAR-A 477
Query: 468 SAWPAHSGHSTPHPS--KPNNDTL-----------LEQVETGRKTETGTSCRLFGIELIN 514
+ WP + P+ P N L L +V T + E G RLFG+ L+
Sbjct: 478 APWPVLPAYQAQQPALRLPCNTALHSYRTEEAAPSLPKV-TEKSKEPGM-VRLFGVNLMK 535
Query: 515 HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSK 574
+ +A ++ + T + + S + K+ K V SP+E QS
Sbjct: 536 PTSGTATADNAGAGAGETSARVAGPCEESGQVSALSRVTKDHK-----VVNESPREIQSN 590
Query: 575 QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 634
QSC+ R+R KVQM G AVGRA+DL L GY+ LI ELE+MFDIK + +++ +
Sbjct: 591 QSCIA--RNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIK---DIKQNFKVAFA 645
Query: 635 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
D++GD M VGDDPW EFC MVK+I I ++ +KM P
Sbjct: 646 DNDGDTMKVGDDPWMEFCRMVKKIVIYPLEE-EKMEP 681
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/649 (47%), Positives = 410/649 (63%), Gaps = 89/649 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+++YYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS GGF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF+V YKP I R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ G
Sbjct: 253 AFDNQCMFIVVYKPSI--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFG 310
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV DFSPHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KN
Sbjct: 311 TIIGVSDFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKN 368
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KR R E+ S++S L Q + QLSV +
Sbjct: 369 KRLREVNEI-----GSSSSHLLPPILTQGQEIGQLSVASPMN------------------ 405
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
+S T D ++ ++ ++ + ++P P P N+ ++
Sbjct: 406 ---ISLTYRDTT--------------EDVMNPSRLLMSYPVQ-----PMPKLNYNNQMVT 443
Query: 492 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
Q+E T+TGT+ RLFG+ L+ + P E++ G IS ++
Sbjct: 444 QIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT---------- 485
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
E K+ Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI
Sbjct: 486 ---EGKKFGQSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLIL 540
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
ELEE+FD+KGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 541 ELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 589
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 303/656 (46%), Positives = 406/656 (61%), Gaps = 98/656 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKV 126
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KV
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNE---------NQFRPLVNSFTKV 134
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASD S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RH
Sbjct: 135 LTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRH 194
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGW+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+
Sbjct: 195 LLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVI 254
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
A+A HA Q MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D E
Sbjct: 255 ASAKHAFDNQCMFIVVYKP----RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSE 310
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RR+ GT++GV +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ +
Sbjct: 311 RRYFGTIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRS 368
Query: 367 VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHS 426
KNKR R E S++S L Q + QLSV +
Sbjct: 369 SFLKNKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSVAS---------------- 407
Query: 427 DFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN 486
N + + R ++ +A++ ++ + ++P P P + N
Sbjct: 408 --PMNISLLYRETTE-----------------DAMNPSRLLMSYPVQ-----PMPKRNYN 443
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS 546
+ ++ Q+E T+ GT+ RLFG+ L ++ P K P+ +
Sbjct: 444 NQMVTQIEENITTKAGTNFRLFGVSL-----ATPPVIKDPIEQI---------------- 482
Query: 547 DGKSDIAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 604
SDI+K E K+ Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L
Sbjct: 483 --GSDISKLTEGKKFGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLN 538
Query: 605 GYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
GYD LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 539 GYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/649 (47%), Positives = 409/649 (63%), Gaps = 91/649 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+++YYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS GGF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ G
Sbjct: 253 AFDNQCMFIVVYKP----RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFG 308
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV DFSPHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KN
Sbjct: 309 TIIGVSDFSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKN 366
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KR R E+ S++S L Q + QLSV + N
Sbjct: 367 KRLREVNEI-----GSSSSHLLPPILTQGQEIGQLSVAS------------------PMN 403
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
+ R + ++ ++ ++ + ++P P P N+ ++
Sbjct: 404 ISLTYRDTT-----------------EDVMNPSRLLMSYPVQ-----PMPKLNYNNQMVT 441
Query: 492 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
Q+E T+TGT+ RLFG+ L+ + P E++ G IS ++
Sbjct: 442 QIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT---------- 483
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
E K+ Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI
Sbjct: 484 ---EGKKFGQSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLIL 538
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
ELEE+FD+KGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 539 ELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 300/656 (45%), Positives = 407/656 (62%), Gaps = 86/656 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P+ PSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E +DE YA+ITL+P+ +Q T + + RP V+SF+KVLTASDTS HGG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV +KHA ECLPPLDM+Q PTQE++A DLHG +WRF+HI+RG +RHLLT GW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LV GD VF+RGE GEL VG+R QQ ++PSS++S +SM G++A+A HA Q
Sbjct: 201 SKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQC 260
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MF+V YKP R+SQFI+S +K+L+ VNNKF VG R+ MRFEG+D ERR GT++GV
Sbjct: 261 MFIVVYKP----RSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVS 316
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKRPR 375
DFSPHWK S+WRSL+VQWDE AS RP++VSPW+IE TP N+ + KNKR R
Sbjct: 317 DFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHL----TPWSNVSRSSFLKNKRSR 372
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 435
E+ S++S L Q + Q S+ ++ N
Sbjct: 373 EVNEI-----GSSSSHLLPPTLTQGQEIGQQSM--------------------ATPMNIS 407
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 495
R + + ++A+ ++ + ++P +K N + ++ +E
Sbjct: 408 LRYRD---------------ITEDAMTPSRLLMSYPVQPM------AKLNYNNVVTPIEE 446
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 555
T S RLFG+ L + P E++ + +I++
Sbjct: 447 NITTNAVASFRLFGVSLATPSVIKDPVEQIGL-----------------------EISRL 483
Query: 556 FKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
+EKK Q Q+ SP E QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI EL
Sbjct: 484 TQEKKFGQSQILRSPTEIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 541
Query: 614 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E++FD+KGQL R +WEI +T++E D MLVG+DPW EFCNMVK+IFI S ++VK +
Sbjct: 542 EKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 300/662 (45%), Positives = 411/662 (62%), Gaps = 84/662 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ +YYFPQGH+E +EAST EL+Q P F LPSK+ C V
Sbjct: 24 MYEQLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVD 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I L +Q TD+VYA+I L+P+ + + TP D+ RP V+SFSK+LT+SD +THGG
Sbjct: 84 DIQLKIDQNTDDVYAEIYLMPDTT--DVITP-ITTMDNQRPMVYSFSKILTSSDANTHGG 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
S+L++HATECLPPLDM+Q TP Q LVAKDLHG EW FKH FRG PRRHL T+GWS F T
Sbjct: 141 LSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFAT 200
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL+ GD FVFLRGENGEL VG+R Q PS VIS+Q M GV+A+ +A ++
Sbjct: 201 TKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKC 260
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+V YKP +SQF+++ +K+++A+NNKF VG R++MRFEG+D E+R+SGT++GV
Sbjct: 261 KFIVVYKP----SSSQFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVN 316
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
D SPHWKDS+WRSL+VQWDE + RPD+VSPWEIE + S++ + QP + + KR R
Sbjct: 317 DMSPHWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLIPSSS--ISQPTVLQKKRARQC 374
Query: 378 MEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 437
E+ S++SN ++
Sbjct: 375 NEIG-----------------------------------------------STSSNLLTG 387
Query: 438 TQSDGEWLTSPRV--KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDT--LLEQV 493
+ L+SP+ +FS ++A++D+K S W P KPNN+ L++Q
Sbjct: 388 QEIGQSSLSSPKSVPEFS---CRDAVEDSKFPSDWLM--SDLVPAIPKPNNNNNQLVQQT 442
Query: 494 ETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 553
+ TE TSC LFG++L + + P + + TT S I
Sbjct: 443 KEKITTEATTSCILFGVDLTKASKTKDPMGPIEATETTT-----------------SCIL 485
Query: 554 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
+ K+ Q SPKE QS S S R R KVQMQGV +GRA+DLT GY+ LI +L
Sbjct: 486 SQDKKLDQTLTWTSPKEVQS--SKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKL 543
Query: 614 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
EE+FD+K +L +R +WEIV+ ++EG++M +GDDPW EFCNM K+IFI S ++++KM +
Sbjct: 544 EELFDLKDELRSRNQWEIVFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKMKSRN 603
Query: 674 KL 675
K+
Sbjct: 604 KV 605
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/649 (47%), Positives = 401/649 (61%), Gaps = 89/649 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +E ST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS HGGF V +KHA ECLP LDM+Q P QEL+A DLHG +WRF H +RG P+RHLLTTG
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKH 254
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF V YKP R+S+FI+S +K+L+AVNNKF VG R+ MR EG+D ERR G
Sbjct: 255 AFDNQCMFTVVYKP----RSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFG 310
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV DFSPHWK S+WRSL+VQWDE S P +VSPW+IE + + N+ + L KN
Sbjct: 311 TIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKN 368
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KR R E+ S++S L Q QLSV +S
Sbjct: 369 KRLREVNEI-----GSSSSHLLPPILTQGQENEQLSV--------------------ASP 403
Query: 432 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 491
N R + E +A++ +K + ++P P P N+ ++
Sbjct: 404 MNISLRYRDATE---------------DAMNPSKLLMSYPVQ-----PMPKLNYNNQMVT 443
Query: 492 QVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
++E T+TGT+ RLFG+ L + P K P+ + +E IS ++
Sbjct: 444 EMEENITTKTGTNFRLFGVTL-----DTPPVIKDPIEEIGSE---ISKLT---------- 485
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
E K+ Q SP E Q+KQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI
Sbjct: 486 ---EGKKFGLSQTLRSPTEIQNKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLIL 540
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
ELE++FDIKGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+IFI
Sbjct: 541 ELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/382 (70%), Positives = 310/382 (81%), Gaps = 7/382 (1%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPT 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
SM LGVLATASHAV T T+FVV+YKPRI SQFIIS+NKY+ A+ N F++GMRY+MRF
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRI----SQFIISVNKYMMAMKNGFSLGMRYRMRF 296
Query: 300 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
EGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA
Sbjct: 297 EGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSA 356
Query: 360 -TPNLVQPVLAKNKRPRLSMEV 380
TP Q +K+KR R E+
Sbjct: 357 LTPTPTQQ-QSKSKRSRPISEI 377
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 473
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/382 (70%), Positives = 310/382 (81%), Gaps = 7/382 (1%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ +
Sbjct: 1 MANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P
Sbjct: 61 DQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPA 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
SM LGVLATASHAV T T+FVV+YKPRI SQFIIS+NKY+ A+ N F++GMRY+MRF
Sbjct: 241 SMRLGVLATASHAVTTTTIFVVFYKPRI----SQFIISVNKYMMAMKNGFSLGMRYRMRF 296
Query: 300 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
EGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA
Sbjct: 297 EGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSA 356
Query: 360 -TPNLVQPVLAKNKRPRLSMEV 380
TP Q +K+KR R E+
Sbjct: 357 LTPTPTQQ-QSKSKRSRPISEI 377
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 24/174 (13%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------HD 473
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/688 (45%), Positives = 411/688 (59%), Gaps = 116/688 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E AST +ELN+ P+ LPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIEL--ASTREELNELQPICDLPSKLQCRVI 58
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 59 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYG 114
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV +KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+
Sbjct: 115 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 174
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 175 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 234
Query: 257 TMFVVYYKPRII------TRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+F+V YKPR I R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+
Sbjct: 235 CIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF 294
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L K
Sbjct: 295 GTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLK 352
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 430
NKR R E S++S L Q + QLSV +S
Sbjct: 353 NKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSV--------------------AS 387
Query: 431 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 490
N R + E A++ ++ + ++P P P N+ ++
Sbjct: 388 PMNISLRYRDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMV 427
Query: 491 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 550
Q+E T+ GT+ RLFG+ L + P K P+ + S
Sbjct: 428 TQIEENITTKAGTNFRLFGVTL-----DTPPMIKDPIKQI------------------GS 464
Query: 551 DIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTK---------------------- 586
DI+K + KK Q Q SP E QSKQ +S+R+ TK
Sbjct: 465 DISKLTERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVSIRSIYSYSLYMKLFLIVLNS 522
Query: 587 -------VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGD 639
VQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +W+I +TD +G
Sbjct: 523 HNLYMEQVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGY 582
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVK 667
MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 583 EMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 317/661 (47%), Positives = 411/661 (62%), Gaps = 93/661 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST ++LN+ P+ LPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQPIVDLPSKLQCRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
I L E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLTASD
Sbjct: 85 TIQLKVERNSDETYAEITLMPYTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 135
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TS HGGFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLTTG
Sbjct: 136 TSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTG 195
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F+TSK+LVAGD VFLRGE GEL VG+R QQ ++PSS+IS +SM GV+A+A H
Sbjct: 196 WNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGVIASAKH 255
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF+V YKP R+SQFI++ +K+L+A+NNKF VG R+ RFE +D ERR+ G
Sbjct: 256 AFDNQCMFIVVYKP----RSSQFIVNYDKFLDAMNNKFNVGSRFTKRFEEDDFSERRYFG 311
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV DFSPHWK S+WRSLK DE AS RPD+VSPWEIE ++ + N+++ + KN
Sbjct: 312 TIIGVIDFSPHWKCSEWRSLK---DEFASFPRPDKVSPWEIE--YSTPSSNVLRLSMLKN 366
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
K R E+ S++S L Q + Q S
Sbjct: 367 KCSREFNEI-----GSSSSHLLPPILTQGQEIGQPS------------------------ 397
Query: 432 SNFMSRTQSDGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 490
+TSP V S +++AI+DN S T NND ++
Sbjct: 398 -------------MTSPMNVPLS---YRDAIEDNSTPSRLLMSYSVQTMSRLNYNNDQMV 441
Query: 491 EQVETGRKTET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK 549
+ G T G SCR+FG+ L ++ P K P+ + DS
Sbjct: 442 TPIIEGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQM--------------DSYPN 482
Query: 550 SDIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 608
S+I+K +EKK Q+ SP+E QSKQ L+S R+ TKVQM GVA+GRALDL+ L GYD
Sbjct: 483 SEISKLSQEKKFGLGQMRSPREIQSKQ--LSSTRTCTKVQMHGVALGRALDLSVLNGYDQ 540
Query: 609 LIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
LI ELE++FD+KGQL R +WEI + D+E D MLVGDDPW EFCNMVK+I I S+++VK
Sbjct: 541 LILELEKLFDLKGQLQNRNQWEIAFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVKN 600
Query: 669 M 669
Sbjct: 601 F 601
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/370 (71%), Positives = 307/370 (82%), Gaps = 7/370 (1%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSK 71
SN D+LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL ASTNQ + +Q IP+F LP K
Sbjct: 34 SNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPK 93
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASD
Sbjct: 94 ILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASD 153
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTG
Sbjct: 154 TSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTG 213
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASH
Sbjct: 214 WSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASH 273
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T T+FVV+YKPRI SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+SPER F+G
Sbjct: 274 AVTTTTIFVVFYKPRI----SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTG 329
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAK 370
T++G D S W SKWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K
Sbjct: 330 TIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQ-QSK 388
Query: 371 NKRPRLSMEV 380
+KR R E+
Sbjct: 389 SKRSRPISEI 398
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 454 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 494
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 495 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 550
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 604
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/654 (47%), Positives = 413/654 (63%), Gaps = 62/654 (9%)
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPR 117
L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PR
Sbjct: 20 LAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPR 79
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKH
Sbjct: 80 PVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKH 139
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
I+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVIS
Sbjct: 140 IYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVIS 199
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
SQSMHLGVLA+ASHA+ T ++F+VYY+PR+ SQ+I+S+NKYL A F VGMR+KM
Sbjct: 200 SQSMHLGVLASASHAIKTNSIFLVYYRPRL--SQSQYIVSVNKYLAASKVGFNVGMRFKM 257
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
FEGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RVSPWEIE
Sbjct: 258 SFEGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDG 317
Query: 358 SATPNLVQPV--LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRI 415
+A P + P+ KNKRPR E L A W + + Q H T + ++E I
Sbjct: 318 TA-PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCI 375
Query: 416 DNH-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDD 463
H V W +H + + S+ + + E WL SP + + SQ++FQ +
Sbjct: 376 SGHQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSN 434
Query: 464 NKNISAWPAHSGHSTPHPSK-----------------PNNDTLLEQVETGRKTETGTSCR 506
I+ WPA S + P+ PN ++E G+K R
Sbjct: 435 EARIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFR 488
Query: 507 LFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQ 563
LFG++L+ + +S+ T + + A+A G + + + F + +E
Sbjct: 489 LFGVDLMKCTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEH 539
Query: 564 VQV--SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+ SP+E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK
Sbjct: 540 IAADESPQEIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK- 596
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
+ KW++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 597 --DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 648
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/653 (45%), Positives = 401/653 (61%), Gaps = 99/653 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G+ VYYFPQG++E ++AST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
IHL E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +G
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYG 139
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF V +KHA ECLPPL + P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFT 195
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q
Sbjct: 196 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQ 255
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
+F+V YKP I R+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV
Sbjct: 256 CIFIVVYKPSI--RSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGV 313
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R
Sbjct: 314 NDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLRE 371
Query: 377 SMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 436
E + QLSV + N++
Sbjct: 372 VNEF-------------------GQEIGQLSVAS------------------PMNTSLRY 394
Query: 437 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 496
R + ++A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 395 RDTT-----------------EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEEN 432
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK-- 554
T+ T+ RLFG+ L P E++ SDI+K
Sbjct: 433 ITTKAVTNFRLFGVSLAIPLVIKDPIEEI-----------------------GSDISKLT 469
Query: 555 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
E K+ Q Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE
Sbjct: 470 EGKKFGQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELE 527
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
++FD+KGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 528 KLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 307/675 (45%), Positives = 401/675 (59%), Gaps = 115/675 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ--------------------------L 51
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSLSV 83
Query: 52 EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNEP 105
E ST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+QNE
Sbjct: 84 ETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE- 142
Query: 106 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 165
+ RP V+SF+KVLTASDTS HGGF V +KHA ECLP LDM+Q P QEL+A
Sbjct: 143 --------NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLA 194
Query: 166 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 225
DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+R
Sbjct: 195 IDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAR 254
Query: 226 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
QQ ++PSS++S M GV+A+A HA Q MF V YKP R+S+FI+S +K+L+AV
Sbjct: 255 HQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKP----RSSKFIVSYDKFLDAV 310
Query: 286 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 345
NNKF VG R+ MR EG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE S P
Sbjct: 311 NNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPK 370
Query: 346 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
+VSPW+IE + + N+ + L KNKR R E+ S++S L Q Q
Sbjct: 371 KVSPWDIEHLMPAI--NVPRSFLLKNKRLREVNEI-----GSSSSHLLPPILTQGQENEQ 423
Query: 406 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 465
LSV +S N R + E +A++ +K
Sbjct: 424 LSV--------------------ASPMNISLRYRDATE---------------DAMNPSK 448
Query: 466 NISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 525
+ ++P P P N+ ++ ++E T+TGT+ RLFG+ L + P K
Sbjct: 449 LLMSYPVQ-----PMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTL-----DTPPVIKD 498
Query: 526 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 585
P+ + +E IS ++ E K+ Q SP E Q+KQ +S+R+ T
Sbjct: 499 PIEEIGSE---ISKLT-------------EGKKFGLSQTLRSPTEIQNKQ--FSSSRTCT 540
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KVQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +WEI +TD + D MLVGD
Sbjct: 541 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGD 600
Query: 646 DPWHEFCNMVKRIFI 660
DPW EFCNMVK+IFI
Sbjct: 601 DPWPEFCNMVKKIFI 615
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/363 (69%), Positives = 302/363 (83%), Gaps = 8/363 (2%)
Query: 1 MANRLGSLSQ---PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
MAN G S+ PSS D LY ELWKACAGPLV+VP G+RV+YFPQGHMEQL ASTNQ
Sbjct: 1 MANVDGDDSRSSFPSSYQDQLYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQ 60
Query: 58 EL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 116
+ +++IP F+LP KILC+V+++ L AE +TDEVYAQITL PE Q+EPT+ DP +
Sbjct: 61 GIESEKIPDFKLPPKILCQVLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDPPIVEPT 120
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
+ HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+ PTQELV +DLHG+EWRFK
Sbjct: 121 KQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFK 180
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR Q++MP+SVI
Sbjct: 181 HIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVI 240
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
SSQSMHLGVLATASHAV TQTMF+V+YKPRI SQFI+S+NKY+EA+ + F++G R++
Sbjct: 241 SSQSMHLGVLATASHAVNTQTMFLVFYKPRI----SQFIVSVNKYMEAMKHGFSLGTRFR 296
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
MRFEGE+SPER F+GT+VG+ D S W S WRSL+VQWDEP ++ RPD+VSPWEIEPF+
Sbjct: 297 MRFEGEESPERIFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPFL 356
Query: 357 ASA 359
S+
Sbjct: 357 PSS 359
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 29/174 (16%)
Query: 493 VETGRKTETGTSC-RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
V+ +SC RLFG +L ++ + P +K P+ + S AA
Sbjct: 393 VQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDT-----------SEAA------- 434
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
K Q+ + S KQ ++R+RTKVQMQG+AVGRA+DLT L YD LI
Sbjct: 435 -------KCQDPITPSSVNEPKKQQ---TSRTRTKVQMQGIAVGRAVDLTLLKSYDELIK 484
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
ELEEMF+I+GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +
Sbjct: 485 ELEEMFEIQGQLLPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 538
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/348 (71%), Positives = 292/348 (83%), Gaps = 5/348 (1%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSK 71
S D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +N + IP+F LP K
Sbjct: 17 SYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPK 76
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASD
Sbjct: 77 ILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTG
Sbjct: 137 TSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASH
Sbjct: 197 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 256
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T T+FVV+YKPRI SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER F+G
Sbjct: 257 AVRTTTIFVVFYKPRI----SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTG 312
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
T+VG D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 313 TIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 360
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 29/184 (15%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 436 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 470
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 471 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 527
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSI 680
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+
Sbjct: 528 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SL 586
Query: 681 EGED 684
E E+
Sbjct: 587 ENEE 590
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/377 (68%), Positives = 301/377 (79%), Gaps = 7/377 (1%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL- 59
MAN + S D LY ELWKACAGPLV+VP+ G+RV+YFPQGHMEQL A TNQ +
Sbjct: 1 MANVDVDFRRSGSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVV 60
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK 119
+Q IP F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + +
Sbjct: 61 DQEIPDFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKQS 120
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q T TQELVA+DLHGYEWRFKHIF
Sbjct: 121 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIF 180
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LARQQS+MP+SVISSQ
Sbjct: 181 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQ 240
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
SMHLGVLATASHAV T+T+FVV+YKPRI SQFII +NKY+ A+ F +GMR++MRF
Sbjct: 241 SMHLGVLATASHAVNTKTLFVVFYKPRI----SQFIIGVNKYMAAMKIGFPIGMRFRMRF 296
Query: 300 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
EGE+SPER F+GT+VG D S W SKWRSL++QWDEP+++ RP++VS WEIEPF S
Sbjct: 297 EGEESPERIFTGTIVGTGDLSSQWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPSV 356
Query: 360 -TPNLVQPVLAKNKRPR 375
TP QP +K+KR R
Sbjct: 357 LTPTPTQP-QSKSKRSR 372
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 27/149 (18%)
Query: 497 RKTET--GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 554
+KTET + CRLFG +L++ S+AP VP L +IS S + S K
Sbjct: 436 KKTETPVTSCCRLFGFDLMSKPASTAP---VPPDKL-----LISVDSNNSGS-AKCQDPN 486
Query: 555 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
E+KQ+ TS RSRTKVQ QG AVGRA+DLT L YD LI+ELE
Sbjct: 487 SLTEQKQQ----------------TSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLV 643
+MF+I G+L + KW IV+TDDEGDMMLV
Sbjct: 531 KMFEIDGELSPKDKWAIVFTDDEGDMMLV 559
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/359 (69%), Positives = 293/359 (81%), Gaps = 16/359 (4%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSK 71
S D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ +N + IP+F LP K
Sbjct: 17 SYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPK 76
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
ILCRV+++ L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASD
Sbjct: 77 ILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTG
Sbjct: 137 TSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASH
Sbjct: 197 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 256
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER---- 307
AV T T+FVV+YKPRI SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER
Sbjct: 257 AVRTTTIFVVFYKPRI----SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLD 312
Query: 308 -------RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
RF+GT+VG D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 313 SETWNVFRFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 371
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 29/184 (15%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 447 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 481
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 482 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 538
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSI 680
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+
Sbjct: 539 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SL 597
Query: 681 EGED 684
E E+
Sbjct: 598 ENEE 601
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/364 (69%), Positives = 301/364 (82%), Gaps = 12/364 (3%)
Query: 1 MANRLG-----SLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST 55
MAN G SLS+ S +D+LY ELWKACAGPLV+VP G++V+YFPQGHMEQL AST
Sbjct: 1 MANVDGDDLRTSLSR--SYNDELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVAST 58
Query: 56 NQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD 114
NQ + ++ IP F+LP KILCRV+++ L AE +TDEVYAQITL PE Q+E T+ DP +
Sbjct: 59 NQGIESEEIPDFKLPPKILCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDPPLVE 118
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
+ HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWR
Sbjct: 119 PTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWR 178
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
FKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+S
Sbjct: 179 FKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTS 238
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMR 294
VISSQSMHLGVLATASHAV T+T+F+V+YKPRI SQFI+ +NKY+EA+ + F++G R
Sbjct: 239 VISSQSMHLGVLATASHAVVTKTIFLVFYKPRI----SQFIVGVNKYMEAMKHGFSLGTR 294
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
++MRFEGE+SPER F+GT+VG+ D S W S WRSL+VQWDEP + RPDRVSPWEIEP
Sbjct: 295 FRMRFEGEESPERMFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEP 354
Query: 355 FVAS 358
F++S
Sbjct: 355 FLSS 358
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
+K QE + S KQ R+RTKV MQGVAVGRA+DLT L Y+ LI ELEEMF
Sbjct: 430 DKCQEPITPSAANEPKKQQ---KQRTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMF 486
Query: 618 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+IKGQL TR KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+
Sbjct: 487 EIKGQLLTREKWVVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 539
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/374 (67%), Positives = 297/374 (79%), Gaps = 19/374 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
D LY ELWK CAGPLV+VP+ +RV+YFPQGHMEQL ASTNQ + ++ IP+F LP KILC
Sbjct: 20 DQLYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVFDLPPKILC 79
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RV+ I L AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTST
Sbjct: 80 RVLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPTKQMFHSFVKILTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLRKHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER------- 307
T T+FVV+YKPRI SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER
Sbjct: 260 TTTIFVVFYKPRI----SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSET 315
Query: 308 ----RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS---AT 360
RF+GT+VG D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A+ +T
Sbjct: 316 WSVFRFTGTIVGTGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 375
Query: 361 PNLVQPVLAKNKRP 374
P + K RP
Sbjct: 376 PAQQPQLKCKRSRP 389
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 111/181 (61%), Gaps = 29/181 (16%)
Query: 504 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 563
S RLFG +L ++ + P +K P + T AA K QE
Sbjct: 453 SYRLFGFDLTSNPPAPLPQDKQP----------MDTCGAA---------------KCQEP 487
Query: 564 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 623
+ + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LI+ELEEMF+I+GQL
Sbjct: 488 ITPTSMNEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQL 544
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 683
R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+E E
Sbjct: 545 RPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMATKLKISS-SLENE 603
Query: 684 D 684
+
Sbjct: 604 E 604
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 304/675 (45%), Positives = 399/675 (59%), Gaps = 103/675 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E L S + L+ + L S L RV+
Sbjct: 25 MYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSLSLSLSLSLSLSLSLSRVI 84
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L E+ +DE YA+ITL+P +Q + + RP V+SF+KVLTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPYTTQVVIHNQN---DNHYRPSVNSFTKVLTASDTSAHGG 141
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV RKHA ECLPPL+M++ P QEL+ DL G +WRFKH +RG P RHL+TTGW+ F T
Sbjct: 142 FSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNAFTT 201
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SK+LVAGD VFLRGE GEL VG+R QQ + PSS+IS SM GV+A+A HA Q
Sbjct: 202 SKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFDNQC 261
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MF+V KP I R+SQFI+S +K+L+AVN KF VG R+ MRFEG+D ERR+SGT++GV+
Sbjct: 262 MFIVVCKPSI--RSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSERRYSGTIIGVK 319
Query: 318 DFSPHWKDSKWRS-------------LKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 364
DFSPHW +S+WRS L+V+WDE AS RPD+VSPWEIE + N++
Sbjct: 320 DFSPHWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHL--TPLSNVL 377
Query: 365 QPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHK 424
+ L KNKR R E+
Sbjct: 378 RSSLLKNKRSREVNEIG------------------------------------------- 394
Query: 425 HSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL---FQEAIDDNKNISAWPAHSGHSTPHP 481
S++S+ + + + + P + + + +++A +D + P+ S P P
Sbjct: 395 ----STSSHLLPPISTQDQEIGQPSMIYPMNVLPSYRDATED----AEIPSRLLISYPVP 446
Query: 482 SKP----NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHI 536
+ P NN+ ++ +E T SCRLFG+ L + PSE K P+
Sbjct: 447 TMPKLTYNNNQMVTPLEKNITTNASASCRLFGVSL------ATPSEIKDPIDQ------- 493
Query: 537 ISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
DS S+I+K +EKK Q S +E QSKQ L+S RS TKVQM+GV V
Sbjct: 494 -------QDSYQISEISKLSQEKKFGLGQTLTSAREIQSKQ--LSSTRSCTKVQMEGVTV 544
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 654
GRALDL+ L GYD LI ELE++FD+ GQL TR +WEI + D+EGD M VGDDPW EFCNM
Sbjct: 545 GRALDLSVLNGYDQLILELEKLFDLNGQLQTRNQWEISFIDNEGDKMFVGDDPWPEFCNM 604
Query: 655 VKRIFICSSQDVKKM 669
VKRI I + + VK +
Sbjct: 605 VKRIIIYTKEKVKNL 619
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/375 (67%), Positives = 296/375 (78%), Gaps = 9/375 (2%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIP 64
G+ + P SD LY+ELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAS + Q+L+Q +P
Sbjct: 7 GAAAGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLP 66
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 124
+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T+ D P + + HSF
Sbjct: 67 MFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFC 126
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+
Sbjct: 127 KTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPK 186
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLG
Sbjct: 187 RHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLG 246
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLATASHA++T T+F V+YKPR T S FI+S+NKYLEA K +VGMR+KMRFEG+D+
Sbjct: 247 VLATASHAISTGTLFSVFYKPR--TSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDA 304
Query: 305 PERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
PERRFSGT++G+ W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A A
Sbjct: 305 PERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDA-AN 363
Query: 361 PNLVQPVLAKNKRPR 375
P QP L + KRPR
Sbjct: 364 PQSPQPPL-RAKRPR 377
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/348 (69%), Positives = 283/348 (81%), Gaps = 6/348 (1%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD LYRELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAST+Q+L+Q +P+F LP KILC
Sbjct: 21 SDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMFNLPPKILC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE QNE T+ DP P + + HSF K LTASDTST
Sbjct: 81 SVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDPEPQEPEKCTAHSFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+ + P QELVAKDLHG EW F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLGVLATASHA++
Sbjct: 201 FVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 260
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S FI+S+NKYLEA K +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 261 TGTLFSVFYKPR--TSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDEAPERRFSGTII 318
Query: 315 GVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
G+ W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A+
Sbjct: 319 GIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAA 366
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/392 (64%), Positives = 305/392 (77%), Gaps = 13/392 (3%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
A + SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ
Sbjct: 4 ATAMAPPSQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRP 118
++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP
Sbjct: 64 NQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRP 123
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HI
Sbjct: 124 AVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHI 183
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISS
Sbjct: 184 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISS 243
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
QSMHLGVLATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MR
Sbjct: 244 QSMHLGVLATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMR 301
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
FEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS
Sbjct: 302 FEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--AS 359
Query: 359 ATPNLVQPVL--AKNKRPRLSMEVPPLDLPSA 388
+ P V P++ ++ KRPR VPP L S+
Sbjct: 360 SPP--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 547
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 548 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 773
Query: 665 DVKKMSPGSKLP 676
+V+KM+ S P
Sbjct: 774 EVQKMNSKSAAP 785
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/385 (65%), Positives = 303/385 (78%), Gaps = 13/385 (3%)
Query: 9 SQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+
Sbjct: 5 SQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 64
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSK 125
LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP V SF K
Sbjct: 65 LPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCK 124
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRR
Sbjct: 125 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRR 184
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGV
Sbjct: 185 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 244
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
LATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++P
Sbjct: 245 LATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAP 302
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
E+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V
Sbjct: 303 EQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VN 358
Query: 366 PVL--AKNKRPRLSMEVPPLDLPSA 388
P++ ++ KRPR VPP L S+
Sbjct: 359 PLVHSSRAKRPR--QNVPPPSLESS 381
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 547
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 594 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 649
Query: 548 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 650 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 707
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 708 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 767
Query: 665 DVKKMSPGSKLP 676
+V+KM+ S P
Sbjct: 768 EVQKMNSKSAAP 779
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/379 (67%), Positives = 300/379 (79%), Gaps = 16/379 (4%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
SD L+RELW ACAGPLV VPK+G+RVYYFPQGHMEQLEASTNQ+L+Q +P+F LPSKILC
Sbjct: 14 SDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILC 73
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
VVN+ L AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTST
Sbjct: 74 SVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTST 133
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS
Sbjct: 134 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSV 193
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++
Sbjct: 194 FVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIS 253
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F V+YKPR T S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++
Sbjct: 254 TGTLFSVFYKPR--TSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTII 311
Query: 315 GVEDF-----SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G+ SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L
Sbjct: 312 GIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL- 368
Query: 370 KNKR------PRLSMEVPP 382
+NKR P + E+PP
Sbjct: 369 RNKRARPPASPSVVAELPP 387
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Query: 567 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-T 625
SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T
Sbjct: 415 SPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 469
Query: 626 RTKWEIVYTDDEGDMMLVGDDPWHEF 651
+W++VYTDDE DMMLVGDDPW +F
Sbjct: 470 LKRWQVVYTDDEDDMMLVGDDPWEKF 495
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/367 (67%), Positives = 297/367 (80%), Gaps = 8/367 (2%)
Query: 13 SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI 72
S D L+RELW ACAGPLV VP+QG+ VYYFPQGHMEQLEAST+Q+L+Q +PLF LP KI
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKI 71
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
LC+VVN+ L AE ++DEVYAQI L PE Q+EPT+PD P + R V+SF K LTASDT
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQPEADQSEPTSPDSEPPEPERCNVYSFCKTLTASDT 131
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSVLR+HA ECLP LDM Q+ P QEL+AKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGW 191
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+SKRLVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS +MHLGVLATASHA
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHA 251
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T T+F V+YKPR T S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERR SGT
Sbjct: 252 ISTGTLFSVFYKPR--TSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGT 309
Query: 313 VVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
++G+ + W +S WRSL+VQWDEP++I RPDRVSPWE+EP A+ P QP L
Sbjct: 310 IIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDAT-NPQPPQPHL 368
Query: 369 AKNKRPR 375
+NKR R
Sbjct: 369 -RNKRAR 374
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/392 (64%), Positives = 305/392 (77%), Gaps = 13/392 (3%)
Query: 2 ANRLGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
A + SQP SNS D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ
Sbjct: 4 ATAMAPPSQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRP 118
++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + P PA SPRP
Sbjct: 64 NQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRP 123
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HI
Sbjct: 124 AVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHI 183
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISS
Sbjct: 184 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISS 243
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
QSMHLGVLATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MR
Sbjct: 244 QSMHLGVLATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMR 301
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
FEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS
Sbjct: 302 FEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--AS 359
Query: 359 ATPNLVQPVL--AKNKRPRLSMEVPPLDLPSA 388
+ P V P++ ++ KRPR VPP L S+
Sbjct: 360 SPP--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 547
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 548 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 648
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPW 757
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/361 (68%), Positives = 295/361 (81%), Gaps = 4/361 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV +P+ G+RVYYFPQGHMEQLEAS +Q L ++P F LPSKILC+
Sbjct: 17 DPLYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCK 76
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTH
Sbjct: 77 VASVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTH 136
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA +CLPPLDM Q P QEL+A DLHG EW F+HIFRGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SK+LVAGD F+FLRG NG+L VGVR L RQQ++MPSSVISS SMHLGVLATAS+A++T
Sbjct: 197 VSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALST 256
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
++MF ++YKPR T S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VG
Sbjct: 257 RSMFSIFYKPR--TSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVG 314
Query: 316 VE-DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
VE D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRA 373
Query: 375 R 375
R
Sbjct: 374 R 374
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 16/189 (8%)
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 555
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD +
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPSNL 518
Query: 556 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 610 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++IFI +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRK 633
Query: 669 MSPGSKLPM 677
+SP KLP+
Sbjct: 634 LSPKIKLPV 642
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/363 (66%), Positives = 295/363 (81%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW++CAGPLV VP++G+ VYYFPQGH+EQ+EASTNQ +Q++PL+ LPSKILCRVV
Sbjct: 40 LYTELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMPLYNLPSKILCRVV 99
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQ+TL+PEP+Q+E +P PR VHSF K LTASDTSTHG
Sbjct: 100 NVLLKAEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPPPRFHVHSFCKTLTASDTSTHG 159
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 160 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 219
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ + PSSVISS SMHLGVLATA HA+ T+
Sbjct: 220 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTK 279
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ + Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 280 TMFTVYYKPR--TSPAEFIVPYDHYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 337
Query: 317 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P W +SKWR LKV+WDE +SI RPDRVSPW+IEP A + P L P +A+ KRPR
Sbjct: 338 EDADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEP--ALSPPALNVPPVARPKRPR 395
Query: 376 LSM 378
S+
Sbjct: 396 SSI 398
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 28/234 (11%)
Query: 467 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV- 525
+S + S HS KP ++++Q E + E + +LFGI L ++ + A +
Sbjct: 598 VSPYMQLSSHSREMMHKP---SVVKQPEAVKPKEG--NYKLFGIPLTSNVCTDAVMMRKS 652
Query: 526 ----PVSSLTTEGHIISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKES 571
P S + H ++ A DSD +S+ +K K +K+ ++ ++
Sbjct: 653 SLIDPASDMNIGIHPHQSL--ATDSDQRSEQSKGSKVDDGVAANDHDKQFHTFHLAARDK 710
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WE 630
K +S RS TKV QG A+GR++DL YD LI EL+++FD G+L R+K W
Sbjct: 711 DGKGHS-SSTRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKSWL 769
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 684
+VYTDDEGDMMLVGDDPW EFC MV++IFI + ++V++M+PG+ + +GED
Sbjct: 770 VVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMNPGT----LNSKGED 819
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 294/364 (80%), Gaps = 14/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 295 STGTMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
VG+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + +
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 372 KRPR 375
KRPR
Sbjct: 410 KRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 294/364 (80%), Gaps = 14/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 295 STGTMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
VG+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + +
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 372 KRPR 375
KRPR
Sbjct: 410 KRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 294/364 (80%), Gaps = 14/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 295 STGTMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
VG+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + +
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 372 KRPR 375
KRPR
Sbjct: 410 KRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/662 (42%), Positives = 388/662 (58%), Gaps = 86/662 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++G
Sbjct: 259 KCMFNVVYKPS----SSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIG 314
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 315 VNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS--------------------------- 347
Query: 376 LSMEVPPLDLPSAASAPWSAR-LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 434
PW L S +++Q S+ + W + ++ SN
Sbjct: 348 ----------------PWDIEHLIPSSDISQSSLKKKKH-------WLQLNEIGATLSNL 384
Query: 435 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQV 493
+ + + SP + + + AI+D+K +S HS + P+ + N+D +++
Sbjct: 385 WTCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPR 442
Query: 494 ETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 553
+ TE TSC LFG++L S + P+ S + D K D
Sbjct: 443 KEDITTEATTSCLLFGVDLTK--VSKSKDSICPIESC----------KKSLPQDKKFD-- 488
Query: 554 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
Q Q SPKE QS + T RSR KV MQGVA+ RA+DLT + GY+ LI +L
Sbjct: 489 -------QTQPLRSPKEVQSTEFNFT--RSRIKVHMQGVAISRAVDLTAMHGYNQLIQKL 539
Query: 614 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
EE+FD+K +L TR +WEIV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +
Sbjct: 540 EELFDLKDELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN 599
Query: 674 KL 675
K
Sbjct: 600 KF 601
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/361 (67%), Positives = 294/361 (81%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 298 TMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 355
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRP
Sbjct: 356 EDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRP 412
Query: 375 R 375
R
Sbjct: 413 R 413
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 504 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 563
+CRLFGI L+N+ + A S ++L + T A SD +K K ++
Sbjct: 648 NCRLFGIPLVNN-MNGADSTMAQRNNLKDAAGLTQT--APPKVQDLSDQSKGSKSTNDQR 704
Query: 564 VQVSPKES-----QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 618
Q P ++ + + S+RS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 705 EQGRPFQTNHPHPKDAHTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFE 764
Query: 619 IKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
G+L K W IVYTDDE DMM VGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 765 FNGELMAPKKDWLIVYTDDENDMMRVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 820
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 294/364 (80%), Gaps = 14/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 295 STGTMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
VG+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + +
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 372 KRPR 375
KRPR
Sbjct: 410 KRPR 413
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/370 (65%), Positives = 294/370 (79%), Gaps = 10/370 (2%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 13 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---RPKVHSFSKV 126
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE P P RP V SF K
Sbjct: 73 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKT 132
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRH
Sbjct: 133 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRH 192
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVL
Sbjct: 193 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 252
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
ATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N ++VGMR++MRFEGE++PE
Sbjct: 253 ATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPE 310
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P
Sbjct: 311 QRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNP 366
Query: 367 V-LAKNKRPR 375
+ L++ KRPR
Sbjct: 367 LPLSRVKRPR 376
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 669 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 727
Query: 618 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 728 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 787
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/371 (66%), Positives = 297/371 (80%), Gaps = 12/371 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 8 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 67
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSK 125
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K
Sbjct: 68 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCK 126
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRR 186
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGV
Sbjct: 187 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 246
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
LATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N ++VGMR++MRFEGE++P
Sbjct: 247 LATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAP 304
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
E+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V
Sbjct: 305 EQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VN 360
Query: 366 PV-LAKNKRPR 375
P+ L++ KRPR
Sbjct: 361 PLPLSRVKRPR 371
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 664 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 722
Query: 618 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 723 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 782
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/364 (67%), Positives = 294/364 (80%), Gaps = 8/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 294 TMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 351
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRP
Sbjct: 352 EDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPAL---SPPALSPVPMPRPKRP 408
Query: 375 RLSM 378
R ++
Sbjct: 409 RSNL 412
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 504 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 560
+CRLFGI L+N+ T + S++ ++ T I S + +D S + +E+
Sbjct: 645 NCRLFGIPLVNNVNGTDTTLSQRNNLNDCTGPTQIASPKVQDLSDQSKGSKSTNDHREQG 704
Query: 561 QE--QVQVSPKESQSK-QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
+ + PK+ Q+K SC RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F
Sbjct: 705 RPFPVNKPHPKDVQTKTNSC----RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLF 760
Query: 618 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 EFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 817
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 294/364 (80%), Gaps = 14/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ L AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTS
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTS 174
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS
Sbjct: 175 THGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWS 234
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+
Sbjct: 235 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 294
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+
Sbjct: 295 STGTMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 352
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
VG+E+ P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + +
Sbjct: 353 VGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRP 409
Query: 372 KRPR 375
KRPR
Sbjct: 410 KRPR 413
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/373 (65%), Positives = 294/373 (78%), Gaps = 6/373 (1%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+ LPS
Sbjct: 14 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPS 73
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP Q + A SPRP V SF K LT
Sbjct: 74 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAAEKASSASAASPRPAVRSFCKTLT 133
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 134 ASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 193
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 194 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 253
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 254 AWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 311
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
F+GT+VG E+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P P+
Sbjct: 312 FTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPPVNPLPLS 369
Query: 369 AKNKRPRLSMEVP 381
++ KRPR + P
Sbjct: 370 SRVKRPRQNAPPP 382
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/365 (66%), Positives = 294/365 (80%), Gaps = 12/365 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LPSK+LCR
Sbjct: 2 DPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCR 61
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSKVLTASD 131
V+N+ L AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K LTASD
Sbjct: 62 VLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCKTLTASD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +G
Sbjct: 121 TSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA H
Sbjct: 181 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWH 240
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A+ T++MF VYYKPR T S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+G
Sbjct: 241 AINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTG 298
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAK 370
T++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++
Sbjct: 299 TIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSR 354
Query: 371 NKRPR 375
KRPR
Sbjct: 355 VKRPR 359
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 652 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 710
Query: 618 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 711 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 770
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/374 (64%), Positives = 295/374 (78%), Gaps = 9/374 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 8 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 67
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 68 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 127
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 128 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 187
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 188 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 247
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 248 AWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 305
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 367
F+GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+
Sbjct: 306 FTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLP 361
Query: 368 LAKNKRPRLSMEVP 381
L++ KRPR + P
Sbjct: 362 LSRGKRPRQNAPPP 375
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 597 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 652
Query: 557 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 653 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 711
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 712 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 771
Query: 666 VKKMSPGSKLP 676
V+KM+ S +P
Sbjct: 772 VQKMNSKSSVP 782
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/374 (64%), Positives = 295/374 (78%), Gaps = 9/374 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 253 AWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 310
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 367
F+GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+
Sbjct: 311 FTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLP 366
Query: 368 LAKNKRPRLSMEVP 381
L++ KRPR + P
Sbjct: 367 LSRGKRPRQNAPPP 380
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 557 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 776
Query: 666 VKKMSPGSKLP 676
V+KM+ S +P
Sbjct: 777 VQKMNSKSSVP 787
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/374 (64%), Positives = 295/374 (78%), Gaps = 9/374 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 253 AWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 310
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 367
F+GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+
Sbjct: 311 FTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLP 366
Query: 368 LAKNKRPRLSMEVP 381
L++ KRPR + P
Sbjct: 367 LSRGKRPRQNAPPP 380
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/374 (64%), Positives = 295/374 (78%), Gaps = 9/374 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++ D LY ELW+ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + L+ LPS
Sbjct: 13 PSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPS 72
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLT 128
K+LCRV+N+ L AE +TDEVYAQI L+PEP QN+ A PRP V SF K LT
Sbjct: 73 KLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLAT
Sbjct: 193 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 252
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+R
Sbjct: 253 AWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 310
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV- 367
F+GT+VG E+ P W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+
Sbjct: 311 FTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLP 366
Query: 368 LAKNKRPRLSMEVP 381
L++ KRPR + P
Sbjct: 367 LSRGKRPRQNAPPP 380
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 23/197 (11%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 557 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW------HEFCNMVKRIF 659
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCNIVRKIY 776
Query: 660 ICSSQDVKKMSPGSKLP 676
I + ++V+KM+ S +P
Sbjct: 777 IYTKEEVQKMNSKSSVP 793
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/363 (66%), Positives = 296/363 (81%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++G+RVYYFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 45 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 285 TMFTVYYKPR--TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
Query: 317 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P W+DSKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEP--ALAPPALNSLPMPRPKRPR 400
Query: 376 LSM 378
+M
Sbjct: 401 SNM 403
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 500 ETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA---AADSDGKSDIAK 554
E G S C+LFGI L ++ P VS T + A +SD KS+ +K
Sbjct: 628 EAGKSKDCKLFGIPLFSNHVMPEPV----VSHRNTMNEPAGNLDQQFRAFESDQKSEHSK 683
Query: 555 EFK-----------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
K EK + Q K+ +SK C S RS TKVQ QG+A+GR++DL+
Sbjct: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQC-GSTRSCTKVQKQGIALGRSVDLSKF 742
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC MV++IFI +
Sbjct: 743 NNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYT 802
Query: 663 SQDVKKMSPGSKLPMFSIEGED 684
++V KM+ S S +GED
Sbjct: 803 KEEVLKMNSVS----LSSKGED 820
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/383 (65%), Positives = 303/383 (79%), Gaps = 9/383 (2%)
Query: 1 MANRLGSLSQPSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
M + G + PSS D LY ELW ACAGPLV VP++G V+YFPQGH+EQ+EASTNQ
Sbjct: 30 MEGQKGHSTHPSSARDAETALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQ 89
Query: 58 ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSP 116
+Q++PL+ LP KILCRVVN+ L AE +TDEV+AQ+TLLP +Q+E + +P P P
Sbjct: 90 VADQQMPLYDLPPKILCRVVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPP 149
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+
Sbjct: 150 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFR 209
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQS++PSSVI
Sbjct: 210 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVI 269
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
SS SMHLGVLATA HAV+T TMF VYYKPR T ++FI+ ++Y+E+V + +++GMR+K
Sbjct: 270 SSHSMHLGVLATAWHAVSTGTMFTVYYKPR--TSPAEFIVPFDQYMESVKSNYSIGMRFK 327
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
MRFEGE++PE+RF+GT+VG+ED P WKDSKWR LKV+WDE ++I RPDRVSPW+IEP
Sbjct: 328 MRFEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEP- 386
Query: 356 VASATPNLVQPVLAKNKRPRLSM 378
A A P L + + KRPR +M
Sbjct: 387 -ALAPPALNPLPMPRPKRPRANM 408
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 25/228 (10%)
Query: 472 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 531
AH+ P P L+++ TG+ + +C+LFGI L + A E+ +++
Sbjct: 619 AHTRELIPKPK------LVQEHNTGKSLDG--NCKLFGIPL--KISKPATPEQAGPTNMV 668
Query: 532 TE--GHI-ISTISAAADSDGKSD------IAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 582
E GH ++ ++SD KS+ +A E + +K QV ++ +S R
Sbjct: 669 NEPMGHTQPASHQLTSESDQKSEHSRGSKLADENENEKPLQVGHMRMRDSHGKAQNSSTR 728
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 641
S TKV QG+A+GR++DLT YD LI EL+ +F+ G+L K W IVYTDDE DMM
Sbjct: 729 SCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKNWLIVYTDDEDDMM 788
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS-----IEGED 684
LVGDDPW EF MV++I I + ++V+++ PG+ + +EGED
Sbjct: 789 LVGDDPWQEFVGMVRKIVIYTREEVQRIKPGTLNSRVNENPSGVEGED 836
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/361 (67%), Positives = 292/361 (80%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPE +Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 294 TMFTVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 351
Query: 317 EDFS-PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRP
Sbjct: 352 EDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRP 408
Query: 375 R 375
R
Sbjct: 409 R 409
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T SA S++ ++ + S + D
Sbjct: 643 QEETAKSREG--NCRLFGIPLSNNMNGTDSAMSQRSNLNDAAGLTQLASPKVQDLPDQSK 700
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++ +K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAHTKSN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 293/364 (80%), Gaps = 8/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 53 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 112
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP Q+E + + P PR +VHSF K LTASDTSTHG
Sbjct: 113 NVDLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 172
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 173 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 232
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 233 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 292
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y E+V +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 293 TMFTVYYKPR--TSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPEQRFTGTIVGI 350
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRP
Sbjct: 351 EDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPAL---SPPALSPVPMPRPKRP 407
Query: 375 RLSM 378
R ++
Sbjct: 408 RSNL 411
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 504 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 560
+CRLFGI L+N+ T + S++ ++ + S + +D S + +E+
Sbjct: 642 NCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLSDQSKGSKSTNDHREQG 701
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
+ VS + Q+ S RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F+
Sbjct: 702 RP-FPVSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFN 760
Query: 621 GQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 GELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 814
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 295/365 (80%), Gaps = 6/365 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP+ G+RV+YFPQGH+EQ+EASTNQ +Q++P + L +KILCR
Sbjct: 8 DALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTST 134
V+N+HL AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTST
Sbjct: 68 VINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 128 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSL 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+
Sbjct: 188 FVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVS 247
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F VYYKPR T ++FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+
Sbjct: 248 TGTIFTVYYKPR--TSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVI 305
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G ED P W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KR
Sbjct: 306 GTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKR 363
Query: 374 PRLSM 378
PR +M
Sbjct: 364 PRANM 368
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 471 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA---PSEKVPV 527
P +TPH L Q E + G +C+LFGI LI+ ++ P ++ +
Sbjct: 530 PHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISKPAANPMHRPQGEIQL 588
Query: 528 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 587
+ H + S+ G + K F+ +Q Q+S ++ QSK S RS KV
Sbjct: 589 TMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQSKLHS-GSTRSCIKV 643
Query: 588 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDD 646
QG+AVGR++DLT GY LI EL+++F+ G+L + K W IV+TDDEGDMMLVGDD
Sbjct: 644 HKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDD 703
Query: 647 PWHEFCNMVKRIFICSSQDVKKMSP 671
PW EFC+MV++IF+ + +++++M P
Sbjct: 704 PWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 295/365 (80%), Gaps = 6/365 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LY+ELW ACAGPLV VP+ G+RV+YFPQGH+EQ+EASTNQ +Q++P + L +KILCR
Sbjct: 8 DALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCR 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTST 134
V+N+HL AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTST
Sbjct: 68 VINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 128 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSL 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+SK+LVAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+
Sbjct: 188 FVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVS 247
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T T+F VYYKPR T ++FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+
Sbjct: 248 TGTIFTVYYKPR--TSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVI 305
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G ED P W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KR
Sbjct: 306 GTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKR 363
Query: 374 PRLSM 378
PR +M
Sbjct: 364 PRANM 368
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 10/220 (4%)
Query: 456 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 515
L E N + P +TPH L Q E + G +C+LFGI LI+
Sbjct: 515 LGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISK 573
Query: 516 ATSSA---PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 572
++ P ++ ++ H + S+ G + K F+ +Q Q+S ++ Q
Sbjct: 574 PAANPMHRPQGEIQLTMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQ 629
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 631
SK S RS KV QG+AVGR++DLT GY LI EL+++F+ G+L + K W I
Sbjct: 630 SKLHS-GSTRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLI 688
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
V+TDDEGDMMLVGDDPW EFC+MV++IF+ + +++++M P
Sbjct: 689 VFTDDEGDMMLVGDDPWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/360 (66%), Positives = 289/360 (80%), Gaps = 6/360 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+RV+YFPQGH+EQ+EASTNQ Q +P++ LP KILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 113
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 114 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHG 173
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 293
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 294 TMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGI 351
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED + W SKWRSLKV+WDE ++I RP+RVS W+IEP A A P L + + KRPR
Sbjct: 352 EDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEP--ALAPPALNPLPMPRPKRPR 409
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 22/216 (10%)
Query: 477 STPHPSKPNNDTLLEQVETGRKTETG----TSCRLFGIELINHATSSAPS---EKVPVSS 529
STP+ S P + LL + +G+ E + C+LFGI L++ + PS VP S
Sbjct: 614 STPYES-PRSRELLPKPISGKPCEVSKPKDSDCKLFGISLLSSPIAPEPSVSQRNVP-SE 671
Query: 530 LTTEGHIISTISAAADSDGKSDIAK-----------EFKEKKQEQVQVSPKESQSKQSCL 578
H S A D+D KS+ ++ + EK + Q K+ Q+K S
Sbjct: 672 PVGHMHTTSHQQRAFDNDQKSEHSRGGSKPADGLLIDDHEKVLQTSQTHLKDIQAK-SHS 730
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV +G+A+GR++DLT Y LI EL+++F+ G L + K W IVYTD+E
Sbjct: 731 GSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYTDNE 790
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
GDMMLVGDDPW EF MV++I+I ++++KMSPG+
Sbjct: 791 GDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGT 826
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/363 (65%), Positives = 293/363 (80%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE ETDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G
Sbjct: 281 TMFTVYYKPR--TSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPR 396
Query: 376 LSM 378
+M
Sbjct: 397 SNM 399
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 476 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 532
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 533 EGHII-STISA--AADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 588
E ++ S + + +S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHSNVHQIHSIESGLKSELPRGSKLADKSVAISEADKLQQTCKSQGTSARSCTKVH 721
Query: 589 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDP 647
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDP
Sbjct: 722 KQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDP 781
Query: 648 WHEFCNMVKRIFICSSQDVKKMSPGS 673
W EFC MV++IFI + ++V+KM+PGS
Sbjct: 782 WREFCGMVRKIFIYTREEVQKMNPGS 807
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/364 (66%), Positives = 297/364 (81%), Gaps = 8/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 57 LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVI 116
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 117 NVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHG 176
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 177 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 236
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T
Sbjct: 237 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTG 296
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 297 TMFTVYYKPR--TSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 354
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRP
Sbjct: 355 EDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRP 411
Query: 375 RLSM 378
R +M
Sbjct: 412 RSNM 415
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 472 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 531
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 532 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 579
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEG 638
S RS TKV QG+A+GR++DLT YD LI EL+++F+ G+L K W IVYTDDEG
Sbjct: 734 STRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEG 793
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
DMMLVGDDPW EFC MV++I+I + ++V++M+PG+
Sbjct: 794 DMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPGT 828
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 284/612 (46%), Positives = 371/612 (60%), Gaps = 89/612 (14%)
Query: 75 RVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
RV+ I L E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLT
Sbjct: 39 RVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNE---------NQFRPLVNSFTKVLT 89
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTS HGGFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLL
Sbjct: 90 ASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLL 149
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGW+ F+TSK+LVAGD VFLRGE GEL V +R QQ ++PSS+IS +SM GV+A+
Sbjct: 150 TTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIAS 209
Query: 249 ASHAVATQTMFVVYYKPRII------TRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
A HA Q MF+V YKPR I R+SQFI++ +K+L+AVNNKF VG R+ MRFE E
Sbjct: 210 AKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEE 269
Query: 303 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
+ ERR+ GT++GV DFSPHWK S+WRSLKVQWDE AS RPD+VSPWEI+ ++ + N
Sbjct: 270 NFSERRYFGTIIGVSDFSPHWKCSEWRSLKVQWDEFASFPRPDKVSPWEIKH--STPSSN 327
Query: 363 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 422
++ + KNKR R E+ S++S L Q + Q S+T+ ++ +++
Sbjct: 328 VLPSSMLKNKRSREFNEI-----GSSSSHLLPPILTQGQEIGQPSMTSP---MNVPLSYR 379
Query: 423 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 482
D S+ S + T PR+ +
Sbjct: 380 DAIEDDSTPSRLLMSYSVQ----TMPRLNY------------------------------ 405
Query: 483 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA 542
NND ++ +E G SCR+FG+ L ++ P K P+ +
Sbjct: 406 --NNDQIVTPIEGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQI------------ 446
Query: 543 AADSDGKSDIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
DSD +I+K +EK Q+ S +E QSKQ L+S R+ TKVQM GV +GRALDL+
Sbjct: 447 --DSDPNLEISKLSQEKIFGLGQMRSTREIQSKQ--LSSTRTCTKVQMHGVTLGRALDLS 502
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
L GYD LI ELE++FD+KGQL R +WEIV+TD+E D MLVGDDPW EFCNMVK+I I
Sbjct: 503 VLNGYDQLILELEKLFDLKGQLQNRNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIY 562
Query: 662 SSQDVKKMSPGS 673
S ++VK G+
Sbjct: 563 SKEEVKNFKSGN 574
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/378 (64%), Positives = 295/378 (78%), Gaps = 12/378 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 10 QAPSAGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLP 69
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKV 126
K+LCRV+N+ L AE +TDEVYAQ+ L+PEP QNE + A PRP V SF K
Sbjct: 70 PKLLCRVINVELKAEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVRSFCKT 129
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRH
Sbjct: 130 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRH 189
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVL
Sbjct: 190 LLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVL 249
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
ATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE
Sbjct: 250 ATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE 307
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
+RF+GT+VG E+ W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P
Sbjct: 308 QRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNP 363
Query: 367 V-LAKNKRPRLSMEVPPL 383
+ L++ KRPR + VPP+
Sbjct: 364 LPLSRVKRPRPN--VPPV 379
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 554
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 588 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 644
Query: 555 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 645 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 703
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 704 YDELTAELDRMFEFDGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 763
Query: 665 DVKKMSPGSKLP 676
+V+KM+ S P
Sbjct: 764 EVQKMNSKSSTP 775
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/364 (66%), Positives = 297/364 (81%), Gaps = 8/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q++P++ LPSKILCRV+
Sbjct: 57 LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVI 116
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 117 NVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHG 176
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 177 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 236
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T
Sbjct: 237 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTG 296
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 297 TMFTVYYKPR--TSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 354
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRP
Sbjct: 355 EDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRP 411
Query: 375 RLSM 378
R +M
Sbjct: 412 RSNM 415
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 69/260 (26%)
Query: 472 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 531
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 532 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 579
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 580 SNRSRTKVQM---------------------------------------------QGVAV 594
S RS TKV + QG+A+
Sbjct: 734 STRSCTKVCIHSLDGCWFLNNEYEIWKMLAGYKIVPQICFIAVSCLMSIGNLVHKQGIAL 793
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 653
GR++DLT YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC
Sbjct: 794 GRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCG 853
Query: 654 MVKRIFICSSQDVKKMSPGS 673
MV++I+I + ++V++M+PG+
Sbjct: 854 MVRKIYIYTREEVQRMNPGT 873
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/479 (53%), Positives = 335/479 (69%), Gaps = 31/479 (6%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S+ D LY ELW ACAGPLV VP++G++V+YFPQGH+EQ+EASTNQ +Q++P+++LPSK
Sbjct: 49 SNEEDFLYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSK 108
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVL 127
ILC V+NI L AE +TDEV+AQ+TL+PE +Q+E TP P + RP VHSF K L
Sbjct: 109 ILCTVINIDLKAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQS---RPHVHSFCKTL 165
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM + P+QELVAKDLHG EW F+HIFRGQPRRHL
Sbjct: 166 TASDTSTHGGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHL 225
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQS++PSSVISS SMHLGVLA
Sbjct: 226 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLA 285
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
TASHA+ T TMF VYYKPR T S+FI+ +Y+E++ +++GMR+KMRFEGE++PE+
Sbjct: 286 TASHAIQTGTMFTVYYKPR--TSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPEQ 343
Query: 308 RFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RF+GT++G+ D S W +SKWR LKV+WDE S+ RPD++SPW+IEP +A P + P
Sbjct: 344 RFTGTIIGIGDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALA---PIALNP 400
Query: 367 V-LAKNKRPRLSM-----------EVPP-LDLPSAASAPWSARLAQSHNLTQL----SVT 409
+ +++ KRPR ++ VPP + + +AA +R+ Q +T L +
Sbjct: 401 LPVSRTKRPRPNILPTSPDVSALTRVPPKVAVDAAAQDHGFSRVLQGQEITTLRGAFAEC 460
Query: 410 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 468
+E + V H H +++ + + S+ W+ R + S DD S
Sbjct: 461 SESENAQKPVGQSHLHDKERVDASSLRKMASEC-WMPLVRPEHSCSGLHGPTDDAYGFS 518
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 40/205 (19%)
Query: 477 STPHPSKPNNDTL-----LEQVETGR------------KTETGTSCRLFGIELIN----H 515
STP P +P N + L++ +GR K++ +C+LFGI L + H
Sbjct: 584 STPVPQQPTNWLISSTPSLKESASGRVHTDHYAQPEPVKSKGSGNCKLFGISLKSSSQQH 643
Query: 516 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE-----------KKQEQV 564
TSS+ ++ + E A +SD S+ K K K + V
Sbjct: 644 ETSSSHAK------VADEAAQTFCKPQALESDRLSEPLKCAKSLDTLCSDSDEVKTNQPV 697
Query: 565 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 624
Q +++ +K C +S RS TKVQ QG A+GR++DL Y+ LI EL+ MF+ +G+L
Sbjct: 698 QQHSRDAHNKPLC-SSTRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELM 756
Query: 625 TRTK-WEIVYTDDEGDMMLVGDDPW 648
K W +VYTD+EGDMMLVGDDPW
Sbjct: 757 NSNKNWLVVYTDNEGDMMLVGDDPW 781
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/363 (65%), Positives = 293/363 (80%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
T+F VYYKPR T S+FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G
Sbjct: 281 TLFTVYYKPR--TSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPR 396
Query: 376 LSM 378
+M
Sbjct: 397 SNM 399
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 25/223 (11%)
Query: 476 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 532
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 533 EGHIISTISA---AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 589
E ++ +++S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHPNVHQIHSSESGLKSELPRVLKLDKSVAISEADKLQQTCKSQGTSARSCTKVHK 721
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 648
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW
Sbjct: 722 QGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAPKKNWLIVYTDDEGDMMLVGDDPW 781
Query: 649 HEFCNMVKRIFICSSQDVKKMSPGS------KLPMFSIEGEDI 685
EFC MV++IFI + ++V+KM+PGS + P S+EGE++
Sbjct: 782 REFCGMVRKIFIYTREEVQKMNPGSLNLKGDENP--SVEGEEV 822
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/363 (65%), Positives = 293/363 (80%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++ +RV+YFPQGH+EQ+EAST+Q +Q++P++ LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+HL AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
T+F VYYKPR T S+FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G
Sbjct: 281 TLFTVYYKPR--TSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPR 396
Query: 376 LSM 378
+M
Sbjct: 397 SNM 399
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/360 (65%), Positives = 292/360 (81%), Gaps = 6/360 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+RELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q +P++ LP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 275
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
T+F VYYKPR T ++FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 276 TIFTVYYKPR--TSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 333
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 334 EDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 13/181 (7%)
Query: 505 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK------ 557
C+LFG LI+ T PS + VS + H+ + +++D K D +K +
Sbjct: 626 CKLFGFSLISGPTLPEPSLSQRNVSEAADQMHLTAHQQRTSENDEKLDHSKGSRPVDDIV 685
Query: 558 ----EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
++ Q+ K+ Q+K S RS TKV +G+A+GR++DLT GYD L+ EL
Sbjct: 686 VDDQDRPLRTSQLHTKDVQAK-PLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAEL 744
Query: 614 EEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
+++F+ G+L T+ W IV+TD+EGDMMLVGDDPW EFC MV++I+I ++++KMSPG
Sbjct: 745 DQLFEFGGELLSTKKDWLIVFTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPG 804
Query: 673 S 673
+
Sbjct: 805 T 805
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/361 (65%), Positives = 290/361 (80%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ Q +P++ LP KILCRV+
Sbjct: 48 LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 107
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 108 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHG 167
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 168 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 227
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 228 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 287
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 288 TMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGI 345
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED + W SKWRSLKV+WDE ++I RP+RVS W+IEP +A P + P+ + + KRP
Sbjct: 346 EDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA---PLALNPLPMPRPKRP 402
Query: 375 R 375
R
Sbjct: 403 R 403
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 19/208 (9%)
Query: 484 PNNDTLLEQVETGRKTETG----TSCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHI 536
P + LL + +G+ E + C+LFGI L++ A+ + S++ S H
Sbjct: 613 PRSRELLSKPISGKPCEVSKLKDSDCKLFGISLLSSRPIASEPSLSQRNVTSESVGHMHT 672
Query: 537 ISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
S A ++D KS+ ++ K EK + Q K+ Q+K S S RS TK
Sbjct: 673 ASHHQRAIENDQKSEHSRGSKPADGLLIDDHEKVLQTSQPHLKDVQAK-SHSGSARSCTK 731
Query: 587 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 645
V +G+A+GR++DLT Y LI EL+++F+ G+L + K W IVYTD+EGDMMLVGD
Sbjct: 732 VHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGD 791
Query: 646 DPWHEFCNMVKRIFICSSQDVKKMSPGS 673
DPW EF MV++I+I ++++KMSPG+
Sbjct: 792 DPWQEFVAMVRKIYIYPKEEIQKMSPGT 819
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/360 (65%), Positives = 291/360 (80%), Gaps = 6/360 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+RELW ACAGPLV VP++ +RV+YFPQGH+EQ+EASTNQ +Q +P++ LP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 275
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
T+F VYYKPR T ++FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GTVVG+
Sbjct: 276 TIFTVYYKPR--TSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGI 333
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED P W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 334 EDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 106/180 (58%), Gaps = 11/180 (6%)
Query: 505 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 563
C+LFG LI+ PS + VS + H+ + +++D KSD +K +
Sbjct: 626 CKLFGFSLISGPIVPEPSLSQRNVSEPAGQMHLTAHQQRTSENDEKSDHSKGSRPVDDLV 685
Query: 564 VQVSPKESQSKQS---------CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
V + Q+ QS S RS TKV +G+A+GR++DLT GYD L+ EL+
Sbjct: 686 VDDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELD 745
Query: 615 EMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
++F+ G+L T+ W IVYTD+EGDMMLVGDDPW EFC MV +I+I ++++KMSPG+
Sbjct: 746 QLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGT 805
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/361 (67%), Positives = 292/361 (80%), Gaps = 4/361 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D LYRELW ACAGPLV +P+ G+RVYYFPQGHMEQLEAS +Q L ++P F LPSKILC+
Sbjct: 17 DPLYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCK 76
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTH
Sbjct: 77 VASVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTH 136
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSVLR+HA +CLPPLDM Q P QEL+A DLHG EW F+HI RGQPRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSVF 196
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+SK+LVAGD +FLRG NG+L VGVR L RQQ++MPSSVISS S+ LGVLATAS+A++T
Sbjct: 197 VSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALST 256
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
++MF ++YKPR T S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VG
Sbjct: 257 RSMFSIFYKPR--TSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVG 314
Query: 316 VE-DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
VE D S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRA 373
Query: 375 R 375
R
Sbjct: 374 R 374
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 17/189 (8%)
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 555
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD A
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPANL 518
Query: 556 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 610 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++I I +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRK 632
Query: 669 MSPGSKLPM 677
+SP K P+
Sbjct: 633 LSPKIKAPV 641
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/403 (59%), Positives = 296/403 (73%), Gaps = 8/403 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D L+ ELW ACAGPLV VPK G +V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC
Sbjct: 65 DALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCE 124
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP----DPCPADSP-RPKVHSFSKVLTAS 130
V+N+ L AE +TDEVYAQ+TLLPE Q E P+ +P RP+VHSF K LTAS
Sbjct: 125 VMNVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTAS 184
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSVLR+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +
Sbjct: 185 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQS 244
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 245 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 304
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HAV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+
Sbjct: 305 HAVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFT 362
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP V+ N +
Sbjct: 363 GTIVGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRT 422
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 412
K RP + + AP A Q H L + T E+
Sbjct: 423 KRPRPNVIASTTDSSTQAKEVAPKVAAETQQHALQRAFQTQEN 465
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA------AADSDGKSDIAKE 555
G SC+LFGI L + A S P + P S+ +G + SA A + + D +K
Sbjct: 662 GASCKLFGIHLDSPAKSE-PLKSPP--SVAYDGMPHTPGSAELCRMDATEPEKCYDPSKT 718
Query: 556 FKEKKQEQVQVSPKE---------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
K P++ + S +S S RS KV QG+A+GR++DLT GY
Sbjct: 719 PKPLDAPYADSVPEKHLSCQQASRNASGKSRGGSARSCKKVHKQGIALGRSVDLTKFNGY 778
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L+ EL++MFD G L + K W +VYTD EGDMMLVGDDPW EFCN+V +IFI + ++
Sbjct: 779 MELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDMMLVGDDPWSEFCNIVHKIFIYTREE 838
Query: 666 VKKMSPGS 673
V++M+PG+
Sbjct: 839 VQRMAPGA 846
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/364 (64%), Positives = 292/364 (80%), Gaps = 8/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 284 TMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGI 341
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP +A P + P+ + + KRP
Sbjct: 342 EDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKRP 398
Query: 375 RLSM 378
R ++
Sbjct: 399 RANV 402
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 471 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 530
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 531 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 578
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 755 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 790
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/363 (65%), Positives = 290/363 (79%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 284 TMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGI 341
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 342 EDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPR 399
Query: 376 LSM 378
++
Sbjct: 400 ANV 402
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 237/363 (65%), Positives = 290/363 (79%), Gaps = 6/363 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP++G+ V+YFPQGH+EQ+EASTNQ Q +P++ L KILCRV+
Sbjct: 44 LYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVI 103
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHG
Sbjct: 104 NVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 164 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTG 283
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 284 TMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGI 341
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 342 EDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPR 399
Query: 376 LSM 378
++
Sbjct: 400 ANV 402
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 15/191 (7%)
Query: 471 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 530
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 531 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 578
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 638 GDMMLVGDDPW 648
GDMMLVGDDPW
Sbjct: 755 GDMMLVGDDPW 765
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/338 (68%), Positives = 281/338 (83%), Gaps = 4/338 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP++G RV+YFPQGH+EQ+EASTNQ +Q++PL+ L KILCRVV
Sbjct: 52 LYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLPKILCRVV 111
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT-TPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 112 NVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 171
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 172 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 231
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 232 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 291
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
T+F VYYKPR T ++FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 292 TLFTVYYKPR--TSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 349
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
ED P WK+SKWR LKV+WDE +++ RP+RVSPW+IE
Sbjct: 350 EDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 29/217 (13%)
Query: 488 TLLEQVETGRKTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTIS 541
L+++ ++G+ E +C+LFGI L A + + P+S + H ++
Sbjct: 626 VLMQEHDSGKSLEG--NCKLFGIPLKISKPVAPEAAGTTITMNEPLSHIQPVSHQLTF-- 681
Query: 542 AAADSDGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
+SD KS+ +K K EK + + K++ K S RS TKV QG+A+
Sbjct: 682 ---ESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQN-GSTRSCTKVHKQGIAL 737
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 653
GR++DL YD LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EF
Sbjct: 738 GRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDEDDMMLVGDDPWQEFVG 797
Query: 654 MVKRIFICSSQDVKKMSPGS------KLPMFSIEGED 684
MV++I I + ++ +K+ PG+ + PM +EGED
Sbjct: 798 MVRKIVIYTKEEAQKIKPGALNSKGVENPM-DMEGED 833
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/384 (61%), Positives = 296/384 (77%), Gaps = 12/384 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D L+ ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 11 QGPSAGDPLFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLP 70
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKV 126
SK+LC V+N+ L AE +TDEVYAQ+ L+PE QNE + +P V SF K
Sbjct: 71 SKLLCSVINVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKT 130
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRH
Sbjct: 131 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRH 190
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVL
Sbjct: 191 LLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVL 250
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
ATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N +++G+R++MRFEGE++PE
Sbjct: 251 ATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPE 308
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P
Sbjct: 309 QRFTGTIIGSENLDPLWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNP 364
Query: 367 V-LAKNKRPRLSMEVPPLDLPSAA 389
+ L++ KRPR + VPP S+A
Sbjct: 365 LPLSRVKRPRPN--VPPASPESSA 386
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 498 KTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 551
KT G+ ++FG ++ NH +S + P + A D +
Sbjct: 601 KTREGSGFKIFGFKVDTASAPTNHLSSPMAATHEPALQTQPSASLNQLQHAQTDCFPEVS 660
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
++ + ++ +Q +P+ S+ QS S RS TKV QGVA+GR++DL+ YD L
Sbjct: 661 VSTGGTNENEKSIQQAPQSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFSDYDEL 720
Query: 610 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 668
EL++MF+ G+L + K W+IVYTD+E DMMLVGDDPW EFC++V++I I + ++V+K
Sbjct: 721 KAELDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQK 780
Query: 669 MS 670
M+
Sbjct: 781 MN 782
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/361 (67%), Positives = 291/361 (80%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LYRELW ACAGPLV VP+Q RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSKILCRV+
Sbjct: 86 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 145
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE ++DEVYAQITLLPE Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 146 NVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 205
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 206 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 265
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLRGENGEL VGVR RQQ ++ SSVISS SMHLGVLATA HA++T
Sbjct: 266 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVISSHSMHLGVLATAWHAISTG 325
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 326 TMFSVYYKPR--TSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 383
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRP
Sbjct: 384 EDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALA---PPALSPVPMPRPKRP 440
Query: 375 R 375
R
Sbjct: 441 R 441
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 491 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 550
E VE K+ G +CRLFGI L+N+ + + + T G T D +S
Sbjct: 669 EMVEDTAKSRDG-NCRLFGIPLVNNVNVTESTMSPRNNFNDTAGLTQMTSPKVQDLSDQS 727
Query: 551 DIAKEFKEKK------QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 604
+K +++ Q PK+ +K S+RS TKVQ QG+A+GR++DL+
Sbjct: 728 KGSKSTNDQREQGRPFQANHHPHPKDVHTKTH---SSRSCTKVQKQGIALGRSVDLSKFQ 784
Query: 605 GYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 663
Y+ LI EL+ MF+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++I I +
Sbjct: 785 NYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCGMVRKISIYTK 844
Query: 664 QDVKKMSPGS 673
++V+KM+PG+
Sbjct: 845 EEVRKMNPGT 854
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/452 (56%), Positives = 313/452 (69%), Gaps = 30/452 (6%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q +S D LY ELW ACAGPLV VP+ G VYYFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 14 QGTSTGDPLYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLP 73
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT----------TPDPCPADSPRPK 119
SK+LCRV+N+ L AE +TDEVYAQ+ L+PEP Q+E T PA RP
Sbjct: 74 SKLLCRVLNVELKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPA---RPA 130
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIF
Sbjct: 131 VRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIF 190
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS
Sbjct: 191 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSH 250
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
SMHLGVLATA HA+ T+TMF VYYKPR T S+FII +KY E+V N +++G R+KMRF
Sbjct: 251 SMHLGVLATAWHAINTKTMFTVYYKPR--TSRSEFIIPYDKYTESVKNIYSIGTRFKMRF 308
Query: 300 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
EGE++PE+RF+GT+VG ++ W +S WRSLKV+WDE ++I RPDRVSPWEIEP AS+
Sbjct: 309 EGEEAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP--ASS 366
Query: 360 TPNLVQPV-LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH 418
P V P+ L++ KR R + VPP AS S R + + + +N
Sbjct: 367 PP--VNPLPLSRAKRSRPN--VPP------ASPESSVRTKEGATKADMDCAQAQRNQNNT 416
Query: 419 VAWHH--KHSDFSSNSNFMSRTQSDGEWLTSP 448
V H + + + ++F + Q W T P
Sbjct: 417 VLPGHEQRSNKLTDINDFDATVQKPMVWSTPP 448
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 26/189 (13%)
Query: 498 KTETGTSCRLFGIEL------INHATSSAPSEKVPV---------SSLTTEGHIISTISA 542
KT G+ ++FG ++ NH S + PV L T+ ++S
Sbjct: 607 KTTEGSDFKIFGFKVDTASAGFNHLNSPMAATHEPVLQTQPSVSLDHLQTDCSPEVSLSI 666
Query: 543 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 602
A +D EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 667 AGTTD---------NEKNIQQCPQSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSK 716
Query: 603 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
V YD L EL++MFD G+L + K W+IVYTD+EGDMMLVGDDPW EFC+MV++I I
Sbjct: 717 FVDYDELTAELDKMFDFDGELMSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICIY 776
Query: 662 SSQDVKKMS 670
+ ++V+KM+
Sbjct: 777 TKEEVQKMN 785
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/624 (43%), Positives = 373/624 (59%), Gaps = 86/624 (13%)
Query: 51 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 110
+EAST +ELN+ P+ PSK+ CRV+ I L E +DE YA+ITL+P+ +Q T +
Sbjct: 113 VEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQN- 171
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
+ RP V+SF+KVLTASDTS HGGFSV +KHA ECLPPLDM+Q PTQE++A DLHG
Sbjct: 172 --QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHG 229
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE GEL VG+R QQ +
Sbjct: 230 NQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGN 289
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
+PSS++S +SM G++A+A HA Q MF+V YKP R+SQFI+S +K+L+ VNNKF
Sbjct: 290 IPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKP----RSSQFIVSYDKFLDVVNNKFN 345
Query: 291 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 350
VG R+ MRFEG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE AS RP++VSPW
Sbjct: 346 VGSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPW 405
Query: 351 EIEPFVASATP--NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 408
+IE TP N+ + KNKR R E+ S++S L Q + Q S+
Sbjct: 406 DIEHL----TPWSNVSRSSFLKNKRSREVNEI-----GSSSSHLLPPTLTQGQEIGQQSM 456
Query: 409 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 468
++ N R + + ++A+ ++ +
Sbjct: 457 --------------------ATPMNISLRYRD---------------ITEDAMTPSRLLM 481
Query: 469 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 528
++P +K N + ++ +E T S RLFG+ L + P E++ +
Sbjct: 482 SYPVQPM------AKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKDPVEQIGL- 534
Query: 529 SLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTK 586
+I++ +EKK Q Q+ SP E QSKQ +S R+ TK
Sbjct: 535 ----------------------EISRLTQEKKFGQSQILRSPTEIQSKQ--FSSTRTCTK 570
Query: 587 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 646
VQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL R +WEI +T++E D MLVG+D
Sbjct: 571 VQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGED 630
Query: 647 PWHEFCNMVKRIFICSSQDVKKMS 670
PW EFCNM + S D K++
Sbjct: 631 PWPEFCNMRGYVASNSKDDPAKVA 654
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHME 49
+Y +LWK CAGPL D+PK G++VYYFPQGH+E
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIE 55
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/346 (65%), Positives = 277/346 (80%), Gaps = 9/346 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC
Sbjct: 19 DALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCE 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTA 129
V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTA
Sbjct: 79 VMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTA 138
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 139 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 198
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
+GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 199 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATA 258
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
HAV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF
Sbjct: 259 WHAVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRF 316
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
+GT+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 317 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 362
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 617 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 676
Query: 559 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 677 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 736
Query: 611 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 737 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 796
Query: 670 SPGS 673
+PG+
Sbjct: 797 NPGT 800
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/364 (64%), Positives = 295/364 (81%), Gaps = 9/364 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW ACAGPLV VP+QG+RVYYFPQGH+EQ+EASTNQ +Q++P++ L SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPRI ++FI+ ++Y+E+V + +++GM ++MRFEGE++PE+R++GT+VG+
Sbjct: 273 TMFTVYYKPRI--SPAEFIVPFDQYMESVKSNYSIGMGFEMRFEGEEAPEQRYTGTIVGI 330
Query: 317 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W DSKWR LKV+WDE +++ RP+RVSPW+IEP +A P + P+ L++ KRP
Sbjct: 331 EDADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALA---PLALNPLPLSRPKRP 387
Query: 375 RLSM 378
R +M
Sbjct: 388 RSNM 391
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 489 LLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAAD 545
L+E+ + + E G + C+LFGI L++ + + + +S+ GH+ + +
Sbjct: 609 LMEKPISVQHHEAGKTKDCKLFGIPLVSSSCVTPEPILLHQNSMNEPVGHMNHQL-GVLE 667
Query: 546 SDGKSDIAKE-----------FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 594
SD KS+ +K + K + Q K+ SK S+RS TKV QG+A+
Sbjct: 668 SDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSKPQS-GSSRSCTKVHKQGIAL 726
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 653
GR++DL+ Y+ LI EL+ +F+ G+L T K W I+YTDDEGD+MLVGDDPW EFC
Sbjct: 727 GRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTDDEGDIMLVGDDPWKEFCG 786
Query: 654 MVKRIFICSSQDVKKMSPGSKL 675
MV++IFI + ++V+KM PGS L
Sbjct: 787 MVRKIFIYTREEVQKMKPGSSL 808
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/344 (65%), Positives = 276/344 (80%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+G
Sbjct: 278 AVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTG 335
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
T+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 336 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 559 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 611 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 670 SPGS 673
+PG+
Sbjct: 814 NPGT 817
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/344 (65%), Positives = 276/344 (80%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+G
Sbjct: 277 AVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTG 334
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
T+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 335 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 559 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 693 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 752
Query: 611 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 753 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 812
Query: 670 SPGS 673
+PG+
Sbjct: 813 NPGT 816
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/377 (62%), Positives = 286/377 (75%), Gaps = 11/377 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D+LY ELWKACAGPLV VP G+RV+YFPQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 18 DELYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 77
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------PDPCPADSPRPKVHSFSKVL 127
+V+N+ L AEQ+TDEVYAQ+TLLPE +T P PA RP+VHSF K L
Sbjct: 78 KVMNVELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTL 137
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM+Q+ PTQEL+ +DLHG EWRF+HIFRGQP+RHL
Sbjct: 138 TASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHL 197
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV++KRLVA D F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLA
Sbjct: 198 LQSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA 257
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
TA HAV T +MF VYYKPR T ++F++ + Y E++ ++GMR+KMRFEGE++ E+
Sbjct: 258 TAWHAVNTGSMFTVYYKPR--TSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQ 315
Query: 308 RFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RF+GT+VG+ D P W DSKWRSLKV+WDE +S+ RPDRVSPW+IEP V+ + N +Q
Sbjct: 316 RFTGTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQA 375
Query: 367 VLAKNKRPRLSMEVPPL 383
K RP P L
Sbjct: 376 PRNKRSRPNAIASSPEL 392
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS----SAPS------EKVPVSSLTTEGHIISTISAAADSDGKSD 551
G+ C LFG L A S S PS + P S + +I + S S
Sbjct: 610 GSPCMLFGFPLDGPAKSEPMISPPSVAYDGMPETPCSEKQPQPEVIELDRSPGTSKLVSP 669
Query: 552 IAKEFKEKKQEQVQVSPKESQSKQSCL-TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
+ + + + Q P+ +++ QS L S RS KV QG+A+GR++DLT YD LI
Sbjct: 670 LDENQSDSAMAKHQTCPEATRNIQSKLQCSTRSCKKVHKQGIALGRSVDLTRFTCYDELI 729
Query: 611 DELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL+ MFD G+L + W +VYTD + DMMLVGDDPW+EFC++V +IFI + ++V KM
Sbjct: 730 AELDRMFDFGGELKGSCENWMVVYTDSDNDMMLVGDDPWNEFCDVVHKIFIYTREEVSKM 789
Query: 670 SPGS 673
+PG+
Sbjct: 790 NPGA 793
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/344 (65%), Positives = 276/344 (80%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++V+YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+G
Sbjct: 278 AVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTG 335
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
T+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 336 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 559 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 611 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 670 SPGS 673
+PG+
Sbjct: 814 NPGT 817
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/400 (58%), Positives = 298/400 (74%), Gaps = 19/400 (4%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 25 DPLFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPC 84
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP------------CPADSPRPKVHS 122
+++NI L AE +TDEVYAQ+TLLP+ Q+E T+ P + P++HS
Sbjct: 85 KLMNIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHS 144
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQ
Sbjct: 145 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQ 204
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMH
Sbjct: 205 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 264
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLATA HAV T +MF VYYKPR T ++F++S ++Y E++ +++GMR+KMRFEGE
Sbjct: 265 LGVLATAWHAVNTGSMFTVYYKPR--TSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGE 322
Query: 303 DSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
++ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP + +P
Sbjct: 323 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAI---SP 379
Query: 362 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSH 401
+ V P+ + KR R S+ P D+P+ + S +A+S
Sbjct: 380 SPVNPLPVRFKRSRSSVNASPSDVPTVSREVASKVMAESQ 419
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 25/191 (13%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------DGKSDI 552
GTS +LFGI L +P + P+ S+ +G + ++ S + D SD
Sbjct: 618 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDIVGVDNCSDP 671
Query: 553 AKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTL 603
+K K + E Q P+ +Q+ Q+ + +S RS KV QG A+GR++DLT
Sbjct: 672 SKTVKPFDGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKF 731
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
YD LI EL++MFD G+L K W +VYTD+EGD+MLVGDDPW+EFC+MV +IFI +
Sbjct: 732 TCYDELIAELDQMFDFDGELKNPCKNWLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYT 791
Query: 663 SQDVKKMSPGS 673
++V++M+PG+
Sbjct: 792 REEVERMNPGA 802
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 303/420 (72%), Gaps = 28/420 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 258
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLATA HAV T +MF VYYKPR T ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 259 VLATAWHAVNTDSMFTVYYKPR--TSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 316
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 317 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 373
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 374 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 604 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 657
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 658 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 717
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 718 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 777
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 778 KIFIYTREEVERMNPGA 794
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 303/420 (72%), Gaps = 28/420 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 21 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 81 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 201 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 260
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLATA HAV T +MF VYYKPR T ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 261 VLATAWHAVNTDSMFTVYYKPR--TSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 318
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 319 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 375
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 376 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 435
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 606 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 659
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 660 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 719
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 720 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 779
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 780 KIFIYTREEVERMNPGA 796
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 303/420 (72%), Gaps = 28/420 (6%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLG
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLG 258
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLATA HAV T +MF VYYKPR T ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 259 VLATAWHAVNTDSMFTVYYKPR--TSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 316
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 317 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 373
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 374 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 293/682 (42%), Positives = 392/682 (57%), Gaps = 109/682 (15%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILC 74
++L+ ELW+ACAGPLV++P+ +RV+YF QGH+EQL+ T+ L ++I +F++P+KILC
Sbjct: 10 EELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILC 69
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTS
Sbjct: 70 K-------AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTS 122
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWS
Sbjct: 123 THGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWS 182
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
TFVTSK+L+AGD FV+LR
Sbjct: 183 TFVTSKKLIAGDAFVYLR------------------------------------------ 200
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+Q+ ++V LNKYLE+ F VGMR+KM FEG+D P ++FSGTV
Sbjct: 201 LSQSQYIV---------------RLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTV 245
Query: 314 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKN 371
V D SP W+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KN
Sbjct: 246 VDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKN 304
Query: 372 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 431
KRPR + E + A W + + H T +S ++E K + VAW + + +S+
Sbjct: 305 KRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAM 360
Query: 432 SNFMSRTQS-DGEWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP- 481
S+ + + + G W + P + + SQ+LFQ +D + + WP S + P
Sbjct: 361 SSSICQNSAVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPS 419
Query: 482 SKPNNDTLLEQVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 529
SK + +T L +T K E G RLFG+ LINHA SSA ++K V +
Sbjct: 420 SKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGA 478
Query: 530 LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 589
T + DS S + K+ V SP+E QS QSC S RSR KVQM
Sbjct: 479 GETSARAAGSFE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQM 529
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDP 647
G V RA+DL L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG P
Sbjct: 530 HGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVP 588
Query: 648 WHEFCNMVKRIFICSSQDVKKM 669
W EFC MV++I I S D M
Sbjct: 589 WQEFCQMVRKIVIHSIGDRGHM 610
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/386 (62%), Positives = 288/386 (74%), Gaps = 23/386 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELW+ACAGPLV VP G+RV+Y PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 27 DGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 86
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQ------NEPTTPDPC-------PADSPRPKVH 121
+V+N+ L AE +TDEVYAQ+TLLPE Q N + D PA + RP+VH
Sbjct: 87 KVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVH 146
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRG
Sbjct: 147 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRG 206
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SM
Sbjct: 207 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSM 266
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATA HAV T TMF VYYKPR T S+F++ + Y E++ ++GMR+KM FEG
Sbjct: 267 HLGVLATAWHAVNTGTMFTVYYKPR--TSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEG 324
Query: 302 EDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
E++ E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +
Sbjct: 325 EEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANS 381
Query: 361 PNLVQPVLA---KNKRPRLSMEVPPL 383
P+ V P+ A K RP + P L
Sbjct: 382 PSPVNPLPAPRTKRARPNVLASSPDL 407
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 417 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 474
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 534 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 590
Query: 475 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 522
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 591 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 647
Query: 523 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 572
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 648 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 704
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 631
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 705 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 763
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 764 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 805
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/320 (71%), Positives = 267/320 (83%), Gaps = 3/320 (0%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
+SD LYRELW ACAGPLV +P+Q +RVYYFPQGHMEQLEAS +Q L Q++P F LPSKIL
Sbjct: 18 SSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKIL 77
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
C+VVN+ L AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTS
Sbjct: 78 CKVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS
Sbjct: 138 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV+SK+LVAGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA+
Sbjct: 198 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAI 257
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T T+F V+YKPR T S F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+
Sbjct: 258 STGTLFSVFYKPR--TSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTI 315
Query: 314 VGVED-FSPHWKDSKWRSLK 332
VG+ D SP W +S+WRSLK
Sbjct: 316 VGLGDNASPGWANSEWRSLK 335
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/396 (59%), Positives = 293/396 (73%), Gaps = 13/396 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+G
Sbjct: 277 AVNTGTMFTVYYKPR--TSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTG 334
Query: 312 TVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 369
T+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ +
Sbjct: 335 TIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVH 391
Query: 370 KNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 403
+ KRPR + +P P+ +AP Q H L
Sbjct: 392 RPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 427
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 634 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 689
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 690 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 749
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 750 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 808
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/385 (62%), Positives = 288/385 (74%), Gaps = 22/385 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELW+ACAGPLV VP G+RV+Y PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 27 DGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPC 86
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEP-----SQNEPTTPDPC-------PADSPRPKVHS 122
+V+N+ L AE +TDEVYAQ+TLLPE S N + D PA + RP+VHS
Sbjct: 87 KVMNVELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHS 146
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQ 206
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMH
Sbjct: 207 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMH 266
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLATA HAV T TMF VYYKPR T S+F++ + Y E++ ++GMR+KM FEGE
Sbjct: 267 LGVLATAWHAVNTGTMFTVYYKPR--TSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGE 324
Query: 303 DSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
++ E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P
Sbjct: 325 EAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSP 381
Query: 362 NLVQPVLA---KNKRPRLSMEVPPL 383
+ V P+ A K RP + P L
Sbjct: 382 SPVNPLPAPRTKRARPNVLASSPDL 406
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 417 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 474
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 533 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 589
Query: 475 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 522
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 590 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 646
Query: 523 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 572
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 647 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 703
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 631
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 704 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 762
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 763 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 804
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/400 (59%), Positives = 294/400 (73%), Gaps = 20/400 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNE--------PTTPDPCPADSPRPKVHSFSKVL 127
V+N+ L AE + DEVYAQ+TLLPE Q E P +P PA RP+VHSF K L
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASP---PAALARPRVHSFCKTL 153
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHL
Sbjct: 154 TASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 213
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
L +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLA
Sbjct: 214 LQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLA 273
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
TA HAV T TMF VYYKPR T ++F++ ++Y+E++ + +GMR+KMRFEGE++PE+
Sbjct: 274 TAWHAVNTGTMFTVYYKPR--TSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQ 331
Query: 308 RFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P
Sbjct: 332 RFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINP 388
Query: 367 V-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 403
+ + + KRPR + +P P+ +AP Q H L
Sbjct: 389 LPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 428
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 635 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 690
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 691 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 750
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 751 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 809
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/404 (58%), Positives = 295/404 (73%), Gaps = 13/404 (3%)
Query: 8 LSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
L+ D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + +
Sbjct: 62 LAGGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYD 121
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSF 123
LP KILC V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF
Sbjct: 122 LPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSF 181
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQP
Sbjct: 182 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 241
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHL
Sbjct: 242 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 301
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
GVLATA HAV T TMF VYYKPR T ++F++ ++Y+E++ + +GMR+KMRFEGE+
Sbjct: 302 GVLATAWHAVNTGTMFTVYYKPR--TSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEE 359
Query: 304 SPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
+PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P
Sbjct: 360 APEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPP 416
Query: 363 LVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 403
+ P+ + + KRPR + +P P+ +AP Q H L
Sbjct: 417 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 460
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 667 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 722
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 723 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 782
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 648
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 783 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 816
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/396 (59%), Positives = 293/396 (73%), Gaps = 13/396 (3%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+G
Sbjct: 277 AVNTGTMFTVYYKPR--TSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTG 334
Query: 312 TVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LA 369
T+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ +
Sbjct: 335 TIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVH 391
Query: 370 KNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 403
+ KRPR + +P P+ +AP Q H L
Sbjct: 392 RPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 427
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/344 (65%), Positives = 274/344 (79%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L+ ELW ACAGPLV VP+ G++ +YFPQGH+EQ+EASTNQ QR+ L+ LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASD 131
N+ L AE +TDEVYAQ+TLLPE + E P A RP+VHSF K LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMRFE E++PE+RF+G
Sbjct: 277 AVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQRFTG 334
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
T+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 335 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 17/189 (8%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 559 KKQEQVQVSPKE-------------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
Q P++ + S +S S RS KV QG+A+GR++DLT G
Sbjct: 693 LDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNG 752
Query: 606 YDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
Y+ LI EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + +
Sbjct: 753 YEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTRE 812
Query: 665 DVKKMSPGS 673
+V++M+PG+
Sbjct: 813 EVQRMNPGT 821
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/385 (60%), Positives = 289/385 (75%), Gaps = 20/385 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATA HAV T +MF VYYKPR T ++F++S +Y E++ +++GMR++MRFEG
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPR--TSPAEFVVSRARYCESLKRNYSIGMRFRMRFEG 323
Query: 302 EDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
E++ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---S 380
Query: 361 PNLVQPVLAKNKRPRLSMEVPPLDL 385
P+ V P+ + KR R S+ P D+
Sbjct: 381 PSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 622 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/385 (60%), Positives = 289/385 (75%), Gaps = 20/385 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATA HAV T +MF VYYKPR T ++F++S +Y E++ +++GMR++MRFEG
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPR--TSPAEFVVSRARYCESLKRNYSIGMRFRMRFEG 323
Query: 302 EDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
E++ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---S 380
Query: 361 PNLVQPVLAKNKRPRLSMEVPPLDL 385
P+ V P+ + KR R S+ P D+
Sbjct: 381 PSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 622 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/385 (59%), Positives = 289/385 (75%), Gaps = 20/385 (5%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-ELNQRIPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYYFPQGH+EQ+EASTN +Q PL+ LP KI C
Sbjct: 26 DALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPC 85
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVH 121
+++N+ L AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++H
Sbjct: 86 KLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA+DLHG EWRF+HIFRG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRG 205
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SM
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATA HAV T +MF VYYKPR T ++F++S +Y E++ +++GMR++MRFEG
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPR--TSPAEFVVSRARYCESLKRNYSIGMRFRMRFEG 323
Query: 302 EDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
E++ E+RF+GT+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---S 380
Query: 361 PNLVQPVLAKNKRPRLSMEVPPLDL 385
P+ V P+ + KR R S+ P D+
Sbjct: 381 PSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 622 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/371 (62%), Positives = 283/371 (76%), Gaps = 7/371 (1%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
D LY+ELW ACAGPLV VP+QG+ V+YFPQGH+EQ+EASTNQ ++++P + LP KILC
Sbjct: 16 GDALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPGKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RVVN+ L AE +TDEV+AQITLLP+ Q+E RP+VHSF K LTASDTST
Sbjct: 76 RVVNVQLKAEPDTDEVFAQITLLPQSEQDENLVEKKALPAPTRPRVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSVLR+HA ECLPPLDM+ P QELVAKDL G EWRF+HIFRGQPRRHLL +GWS
Sbjct: 136 HGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSL 195
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++K+LVAGD F+FLRGE GEL VGVR RQ ++PSS +SS SMH+G+LATA HAV+
Sbjct: 196 FVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGILATAWHAVS 255
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T TMF VYYKPR T ++FII ++KY+E+V N F +GMR+KMRFE E++PE+RF GTV+
Sbjct: 256 TGTMFTVYYKPR--TSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPEQRFLGTVI 313
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GVE P W S+WR LKV+WDE +S+ RPDRVSPWE+EP +A P P + KR
Sbjct: 314 GVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPALAPLDP---LPT-CRLKR 369
Query: 374 PRLSMEVPPLD 384
R +M +P D
Sbjct: 370 SRSNMPMPSAD 380
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII----STISAAADS--DGKSD 551
K++ +C+LFGI LI S VP+ + T + + + + A+D D SD
Sbjct: 584 KSKEDGNCKLFGISLI--------SSPVPMENATVDNNFMHRPQGLFNLASDKLQDFGSD 635
Query: 552 IA-KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSR-TKVQMQGVAVGRALDLTTL 603
++ ++ K+ K + +E S + L + +R KV QG+AVGR +DLT
Sbjct: 636 LSLQQLKKPKFFDSTIRCEEEKLFMASHFIEGKLQNGSTRCVKVHKQGIAVGRYVDLTKF 695
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
GY+ LI EL+ +F+ G+L T K W I +TDDEGDMMLVGDDPW EFC+MV+RIF+ +
Sbjct: 696 NGYNELIAELDRIFEFSGELITSNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYT 755
Query: 663 SQDVKKMSPGSKLP 676
+++ +M+ S P
Sbjct: 756 REEINRMNQRSLNP 769
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/343 (64%), Positives = 270/343 (78%), Gaps = 11/343 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILCRV 76
L+ ELWKACAGPL VP G+RV+YFPQGH+EQ+EASTNQ Q+ PL+ LP KI C+V
Sbjct: 22 LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT-------PDPCPADSPRPKVHSFSKVLTA 129
+N+ L AEQ+TDEVYAQ+TLLPE Q+E + PD PA + R +VHSF K LTA
Sbjct: 82 MNVELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTA 141
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EW F+HIFRGQPRRHLL
Sbjct: 142 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQ 201
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
+GWS FV++KRLVAGD F+FLRGENGEL VGVR RQ++++PSSVISS SMHLGVLATA
Sbjct: 202 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATA 261
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
H T TMF VYYKPR T ++F++ + + E++ ++GMR+KMRFEGE++ E+RF
Sbjct: 262 WHVANTGTMFTVYYKPR--TSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQRF 319
Query: 310 SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWE 351
+GT+VG+ D P W DSKWRSLKV+WDE +S+ RP+RVSPW+
Sbjct: 320 TGTIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/373 (59%), Positives = 276/373 (73%), Gaps = 14/373 (3%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q SS D LY ELW ACAGPLV VP+ G V+YFPQGH+EQ+EAS NQ + ++ L+ LP
Sbjct: 8 QGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLP 67
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSK 125
SK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP S
Sbjct: 68 SKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPGEGPSA 126
Query: 126 VLTASDTSTHGGFSVLRKHA--TECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
+ T S+ + LP DM QS PTQELVAKDLH +WRF+HIFRGQP
Sbjct: 127 RRSPRLTPARTAASLYSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQP 186
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHL
Sbjct: 187 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHL 246
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
GVLATA HA+ T++MF VYYKPR T S+FII ++Y+E+V N ++VGMR++MRFEGE+
Sbjct: 247 GVLATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEE 304
Query: 304 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
+PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P
Sbjct: 305 APEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP-- 360
Query: 364 VQPV-LAKNKRPR 375
V P+ L++ KRPR
Sbjct: 361 VNPLPLSRVKRPR 373
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 666 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 724
Query: 618 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 725 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 784
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/332 (63%), Positives = 262/332 (78%), Gaps = 5/332 (1%)
Query: 29 PLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQET 87
PLV VP+QG+ VYYFPQGH+EQ+EASTNQ + Q++P + L KILCRVVN+ L AE +T
Sbjct: 4 PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDT 63
Query: 88 DEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHAT 146
DEV+AQ+ LLPE Q+ E + P RP+VHSF K+LTASDTSTHGGFSVL++HA
Sbjct: 64 DEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHAD 123
Query: 147 ECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDT 206
ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGD
Sbjct: 124 ECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDA 183
Query: 207 FVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR 266
F+FLRGE EL VGVR RQ S +PSS+ISS SMH+G+LATA HAV+T +MF VYYKPR
Sbjct: 184 FIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKPR 243
Query: 267 IITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKD 325
T ++FII ++KY+E+V +A+GMR+KMRFE +D+PE+RFSGTV+GVE+ P W
Sbjct: 244 --TSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPR 301
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
S WR LKV WDE + + RPDRVSPW++EP +A
Sbjct: 302 SNWRCLKVHWDETSPVHRPDRVSPWKVEPALA 333
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 18/225 (8%)
Query: 477 STPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 536
S+PHPS+ L Q + +T + +LFG+ L ++ + P+ + S H
Sbjct: 497 SSPHPSRSKPKHLPFQ-QCNERTAKDDNYKLFGVSLFRNSKALEPA-TIHRHSADKPQHQ 554
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQVQ----------VSPKESQSKQSCLTSNRSRTK 586
I+ S G ++ K K + + + K+ Q K ++ R K
Sbjct: 555 INVASDHLQLLGSDRYLEQLKHPKHARCEEQENIFQASSLYSKDVQGKPEGGSARRC-VK 613
Query: 587 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 645
V QG AVGR+LDL+ GY+ L EL+++F+ G+L K W IV+TDDE DMMLVGD
Sbjct: 614 VHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDMMLVGD 673
Query: 646 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 690
DPW EFC+MV+RIFI + +++ +M P S ++E E S+D
Sbjct: 674 DPWQEFCSMVRRIFIYTKEEINRMEPRS----LNLEAEGNSRSTD 714
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/383 (58%), Positives = 281/383 (73%), Gaps = 17/383 (4%)
Query: 1 MANRLGSLSQPSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ 57
M + G ++P S D LY ELW ACAGPLV VP++ + VYYFPQGH+EQ+EASTNQ
Sbjct: 32 MEGQKGHSTRPVSAKDAEKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQ 91
Query: 58 ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSP 116
+Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPEP Q+E DP P
Sbjct: 92 LADQQMPVYNLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPP 151
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF K LTASDTSTHGGFSVLR+HA ECLPPL ST + +
Sbjct: 152 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLVSINSTEFVRCLIDIIM------- 204
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
+ GQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVI
Sbjct: 205 -LIPGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 263
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
SS SMHLGVLATA HA++T T+F VYYKPR T ++FI+ ++Y+E+V N + +GMR+K
Sbjct: 264 SSHSMHLGVLATAWHAISTGTLFTVYYKPR--TSPAEFIVPFDRYMESVKNNYCIGMRFK 321
Query: 297 MRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
MRFEGE++PE+RF+GT+VG+ED S W++SKWRSLKV+WDE ++I RPDRVSPW +EP
Sbjct: 322 MRFEGEEAPEQRFTGTIVGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEP- 380
Query: 356 VASATPNLVQPVLAKNKRPRLSM 378
A A P L + + KRPR +M
Sbjct: 381 -ALAPPALNPLPVPRPKRPRSNM 402
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 18/214 (8%)
Query: 490 LEQVETGRKTETGTSCRLFGIELINHATSSAP--SEKVPVSSLTTEGHIISTISAAADSD 547
L++ + G+ T+ +C+LFGI L ++ + P S + V+ TT H S A +SD
Sbjct: 621 LQEHDIGKSTDG--NCKLFGIPLFSNPVAPEPATSHRNMVNEPTT-AHPQSHQPRALESD 677
Query: 548 GKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 600
+S+ + K EK+ + + ++ Q K S RS TKV QG+A+GR++DL
Sbjct: 678 QRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQT-GSTRSCTKVHKQGIALGRSVDL 736
Query: 601 TTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 659
YD LI EL+ +F+ G+L + K W IVYTDDEGDMMLVGDDPW EF MV++IF
Sbjct: 737 AKFNNYDELIAELDRLFEFGGELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIF 796
Query: 660 ICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 693
I + ++V+KM+PG+ + +G++ LL D +
Sbjct: 797 IYTREEVQKMNPGT----LNSKGDEHLLDVDGVD 826
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/304 (75%), Positives = 254/304 (83%), Gaps = 15/304 (4%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G + LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 1 MANRGG---------EYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 51
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 52 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 111
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR QQSSMPSSVISS
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
SMHLGVLATA HA T+TMF+VYYKP RTSQFIISLNKYLEA++NKF+VGMR+KMR
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKP----RTSQFIISLNKYLEAMSNKFSVGMRFKMR 287
Query: 299 FEGE 302
GE
Sbjct: 288 LWGE 291
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/727 (38%), Positives = 402/727 (55%), Gaps = 80/727 (11%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + IP + L +ILCRVVN
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+ LLP+ + P+ AD SP + H F K L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RGQPRRHL
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHL 232
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+I +QS L+
Sbjct: 233 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLS 292
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+ ++A++ ++MF V+Y PR + F++ KY +++ N +G R+KM+FE ++SPER
Sbjct: 293 SVANAISAKSMFHVFYSPR--ASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPER 350
Query: 308 RF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
R SG V G+ D P+ W SKWR L V+WDE DRVSPWEI+P + N+
Sbjct: 351 RCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQS 410
Query: 366 PVLAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL--------SVTA 410
K R L +E P + + S S+++ Q T +VT
Sbjct: 411 SRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYYGCDTVTK 470
Query: 411 EDKRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTSPRVKFSQQLFQE 459
+ + N + +H++ +SN S+ +R Q E PRV +Q+++
Sbjct: 471 QKEFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQAQEIYPL 526
Query: 460 AIDDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG--------RKTETGTS 504
K N+++W +++ ++ + +K N +L +V K G+S
Sbjct: 527 RSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSS 586
Query: 505 CRL-----FGIELINHATSS----APSEKVPVSS--LTTEGHIISTISAAADSDGKSDIA 553
F + ++ T S A +V +SS + E + + ISAA D I+
Sbjct: 587 MLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSLDANIRIS 646
Query: 554 KE--FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAVGRALDLTTLVGY 606
+ FKE K +S + Q+ S RS TKV QG VGRA+DL+ L Y
Sbjct: 647 NDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSY 706
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+MV +I I + ++
Sbjct: 707 NDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQEE 766
Query: 666 VKKMSPG 672
V+KM+ G
Sbjct: 767 VEKMTIG 773
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/366 (61%), Positives = 282/366 (77%), Gaps = 8/366 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN-QRIPLFRLPSKILC 74
D LY+ELW ACAGPLV VP+QG+ VYYFPQGH+EQ+EASTNQ + Q++P + LP KILC
Sbjct: 2 DALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKILC 61
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
RVVN+ L AE +TDEV+AQ+ LLP Q+ + + P RP+VHSF K+LTASDTS
Sbjct: 62 RVVNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTS 121
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSVLR+HA ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 122 THGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 181
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++K+LVAGD F+FLRGE EL VGVR Q S++PSSV+SS SMH+G+LAT HAV
Sbjct: 182 LFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAV 241
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+T +MF VYYKPR T ++FII ++KY E+V +A+GMR+KM+FE E++PE+RFSGTV
Sbjct: 242 STGSMFTVYYKPR--TSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQRFSGTV 299
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
+GVE+ P W SKWR LKV+WDE + + RPDRVSPW+IE +A P+L ++K
Sbjct: 300 IGVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALA---PSLDPVPGCQSK 356
Query: 373 RPRLSM 378
R R +M
Sbjct: 357 RHRSNM 362
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 281/739 (38%), Positives = 402/739 (54%), Gaps = 92/739 (12%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + IP + L +ILCRVVN
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+ LLP+ + P+ AD SP + H F K L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG------ 181
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETEL 232
Query: 182 ------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
QPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+
Sbjct: 233 LCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESI 292
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
I +QS L++ ++A++ ++MF V+Y PR + F++ KY +++ N +G R+
Sbjct: 293 IGNQSCSPSFLSSVANAISAKSMFHVFYSPR--ASHADFVVPYQKYAKSIRNPVTIGTRF 350
Query: 296 KMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
KM+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE DRVSPWEI+
Sbjct: 351 KMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEID 410
Query: 354 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL 406
P + N+ K R L +E P + + S S+++ Q T
Sbjct: 411 PSTSLPPLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSF 470
Query: 407 --------SVTAEDKRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTS 447
+VT + + N + +H++ +SN S+ +R Q E
Sbjct: 471 MSLYYGCDTVTKQKEFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRF 526
Query: 448 PRVKFSQQLFQEAIDDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG---- 496
PRV +Q+++ K N+++W +++ ++ + +K N +L +V
Sbjct: 527 PRVLQAQEIYPLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFP 586
Query: 497 ----RKTETGTSCRL-----FGIELINHATSS----APSEKVPVSS--LTTEGHIISTIS 541
K G+S F + ++ T S A +V +SS + E + + IS
Sbjct: 587 YGDIHKVGQGSSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDIS 646
Query: 542 AAADSDGKSDIAKE--FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAV 594
AA D I+ + FKE K +S + Q+ S RS TKV QG V
Sbjct: 647 AATSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLV 706
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 653
GRA+DL+ L Y+ L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+
Sbjct: 707 GRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCD 766
Query: 654 MVKRIFICSSQDVKKMSPG 672
MV +I I + ++V+KM+ G
Sbjct: 767 MVSKIHIYTQEEVEKMTIG 785
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 264/364 (72%), Gaps = 21/364 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQG++E +EAST +ELN+ P+ LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
IHL E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASD 134
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTG
Sbjct: 135 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 194
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 195 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A Q MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ G
Sbjct: 255 AFDNQCMFIVVYKP----RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFG 310
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T++GV +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KN
Sbjct: 311 TIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKN 368
Query: 372 KRPR 375
KR R
Sbjct: 369 KRLR 372
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 57/221 (25%)
Query: 457 FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA 516
F++A++ ++ + ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L
Sbjct: 377 FEDAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL---- 427
Query: 517 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSK 574
++ P K P+ + SDI+K E K+ Q Q SP + QSK
Sbjct: 428 -ATPPVIKDPIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSK 468
Query: 575 Q-----SC---------------------LTS-NRSRTKVQMQGVAVGRALDLTTLVGYD 607
Q +C LTS N +VQMQGV +GRA+DL+ L GYD
Sbjct: 469 QFSSTRTCTKVSIRSIYSYSLYMKLFLIILTSHNFDMEQVQMQGVTIGRAVDLSVLNGYD 528
Query: 608 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW
Sbjct: 529 QLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPW 569
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/677 (41%), Positives = 366/677 (54%), Gaps = 76/677 (11%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+L ELW ACAGPL +P V Y+PQGH+EQ+ A+ + +++ LP+ +LCR
Sbjct: 2 DELNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQ--FSNLPAHLLCR 59
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+ I L A+ +TDEV+AQ+ L P+ ++ T P P + V SF K LTASDTSTH
Sbjct: 60 ISKIELQADPQTDEVFAQMDLTPQYELSKETKDAPSPIQ--QSNVRSFCKTLTASDTSTH 117
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A ECLP LD N P QELVAKDLHG +W F+HI+RG PRRHLLTTGWS F
Sbjct: 118 GGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVF 177
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRLVAGDT +FLRGENG+L VGVR ++QQ S+ SS ++HLGVLA ASHA
Sbjct: 178 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATE 237
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F V Y PR T S+F+I +KYL + +N VG R+KM+FE E+S ERR+SGT+V
Sbjct: 238 RLRFSVIYNPR--TSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSGTIVE 295
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
+ D P W S WRS+KV+WDE AS R +RVSPWEIEP V +T L P + P
Sbjct: 296 ISDVDPLKWPSSAWRSMKVEWDESAS-ERHERVSPWEIEPLVPIST--LPTPPVG----P 348
Query: 375 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 434
R P D +S W++ + ++ D S N
Sbjct: 349 RPKRRPPTFD----SSVSWASYMGTG---------------------AYQFRDPSCNKIL 383
Query: 435 MS-RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGH----STPHPSKPNNDTL 489
S T S LTSP V QL +++++ + AH+ T + N
Sbjct: 384 PSWLTNSKSANLTSPPVPARSQLPITSLNNDPKVLH--AHNLSFELWETVEQEQLNASPA 441
Query: 490 LEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK 549
LEQ C+LFG L + + PVSS S DS+G
Sbjct: 442 LEQ-----------QCKLFGFNLADKVVPT------PVSSAP---------SLCEDSEGS 475
Query: 550 SD-IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 608
+ + +V + + Q + RS TKV G VGR +DL Y
Sbjct: 476 GPWSSSDHTSSTSADTRVGMIVTGTYQPLVAPVRSGTKVYYSG-KVGRTIDLKKCESYAA 534
Query: 609 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
L L +F ++GQL TK W++VYTD E D++LVGDDPW EFCN V+ + + S QD
Sbjct: 535 LRRMLASLFGLEGQLDDVTKGWQLVYTDHENDVLLVGDDPWEEFCNCVRSLKVLSPQDAA 594
Query: 668 KMSPGSKLPMFSIEGED 684
S G K PM + + +D
Sbjct: 595 GQSVG-KYPMTNCDEDD 610
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/318 (64%), Positives = 252/318 (79%), Gaps = 6/318 (1%)
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVH 121
+P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VH
Sbjct: 1 MPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 60
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRG
Sbjct: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 120
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SM
Sbjct: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 180
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
HLGVLATA HAV T TMF VYYKPR T ++FI+ ++Y+E++ N + +GMR+KMRFEG
Sbjct: 181 HLGVLATAWHAVLTGTMFTVYYKPR--TSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEG 238
Query: 302 EDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
E++PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A
Sbjct: 239 EEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAP 296
Query: 361 PNLVQPVLAKNKRPRLSM 378
P L + + KRPR ++
Sbjct: 297 PALNPLPMPRPKRPRANV 314
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 471 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 530
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 489 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 547
Query: 531 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 578
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 548 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 606
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 607 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 666
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 667 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 702
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/297 (65%), Positives = 237/297 (79%), Gaps = 9/297 (3%)
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRP 118
L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP
Sbjct: 3 LYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRP 62
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HI
Sbjct: 63 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
FRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
SMHLGVLATA HAV T TMF VYYKPR T ++F++ ++Y+E++ +++GMR+KMR
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPR--TSPAEFVVPYDRYMESLKQNYSIGMRFKMR 240
Query: 299 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
FEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 241 FEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 297
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 502 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 552 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 611
Query: 559 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 610
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 612 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 671
Query: 611 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 672 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 731
Query: 670 SPGS 673
+PG+
Sbjct: 732 NPGT 735
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/278 (72%), Positives = 230/278 (82%), Gaps = 6/278 (2%)
Query: 104 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 163
EPT+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQEL
Sbjct: 18 EPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQEL 77
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
VA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR
Sbjct: 78 VARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRR 137
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPRI SQFIIS+NKY+
Sbjct: 138 LAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI----SQFIISVNKYMM 193
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 343
A+ N F++GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI R
Sbjct: 194 AMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQR 253
Query: 344 PDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 380
P++VSPWEIEPF SA TP Q +K+KR R E+
Sbjct: 254 PNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 290
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 113/189 (59%), Gaps = 27/189 (14%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 346 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 386
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 387 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 442
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 681
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S + +
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKS---LLGDK 499
Query: 682 GEDILLSSD 690
G + L SD
Sbjct: 500 GTIVNLESD 508
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/293 (67%), Positives = 242/293 (82%), Gaps = 4/293 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW ACAGPLV VP+QG+RVYYFPQGH+EQ+EASTNQ +Q++P++ L SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
TMF VYYKPRI ++FI+ ++Y+E+V + +++GMR+KMRFEGE++PE+R
Sbjct: 273 TMFTVYYKPRI--SPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRL 323
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 272/400 (68%), Gaps = 40/400 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL----------------------------- 51
ELW ACAGPL+ +P +G V YFPQGHMEQL
Sbjct: 32 ELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLEKTAV 91
Query: 52 -----EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 106
AS Q ++Q+ P + LP +ILCRV+N++L A+QE DEVYAQ+TL+PE ++E
Sbjct: 92 ASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEKSEKC 151
Query: 107 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 166
+ PA S H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAK
Sbjct: 152 MEEQVPA-STSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAK 210
Query: 167 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
DLHG EWRF+HIFRGQPRRHLLTTGWS FV++KRLV+GD +FLRGENGEL +G+R +R
Sbjct: 211 DLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRLGIRRASR 270
Query: 227 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVN 286
QQS SSV+SSQSMHLGVL A+HAVAT++MF +++ PR T ++F+I +KY+++ N
Sbjct: 271 QQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPR--TSPAEFVIPYHKYVKSFN 328
Query: 287 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 345
+ A+GMR+KMRFE ED+ ERR++GT+ G+ D P W SKWRSLKV+WDE A+ R +
Sbjct: 329 HPLAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHAANERQE 388
Query: 346 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 385
RVSPWEIEPF++S N+ P + KR R S + DL
Sbjct: 389 RVSPWEIEPFISSTGLNI--PAGPRIKRLRTSFQPTSTDL 426
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 492 QVETGRKTETGTSCRLFGIELINHATS-SAPSEKVPVSSLTTEGHIIST------ISAAA 544
QV+ G + +C+LFG+ LI + S ++ S+ ++G ++ S++
Sbjct: 682 QVKDGGGVKGDRNCKLFGVSLIEESDCIDDGSSRMHKDSVISDGLHVALGKGPFHFSSSQ 741
Query: 545 DSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 596
D D + K+ + + EQ S ++K S S RS TKV QG AVGR
Sbjct: 742 DHD---QLEKDLDDHCGHLVPLRDTEQEITSQMVPKAKSSVQASGRSCTKVHKQGNAVGR 798
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMV 655
A+DL+ GYD LI ELE +F+++ L K W +VYTD+EGD+MLVGDDPW EFC++V
Sbjct: 799 AVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVYTDNEGDIMLVGDDPWQEFCSIV 858
Query: 656 KRIFICSSQDVKKMSPG 672
+I I + ++V+KM+PG
Sbjct: 859 CKIMIYTREEVEKMTPG 875
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/390 (52%), Positives = 273/390 (70%), Gaps = 22/390 (5%)
Query: 5 LGSLSQPS--------SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN 56
LG + PS ++ LY+ELW ACAGPLV +P++G+RVYYFPQGH+EQL A
Sbjct: 24 LGGIGCPSWRQVQFQNCCNNALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQ 83
Query: 57 QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 116
Q+ ++ LPSKILC+V+N+ AE TD+VYAQI LLPEP Q + +PDP +
Sbjct: 84 QQSEHQMASLNLPSKILCKVINVQCKAEPITDQVYAQIMLLPEPEQIDVISPDPPLPEPE 143
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
R VHSF ++LT SD S+H F V +KHA CLPPLDM+Q P QELVA DL+G +W F+
Sbjct: 144 RCVVHSFRRILTVSDISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQ 203
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HIF+G+ +HLLTTGWS FV+SK+LV+GD F+FLRGENGEL VGVR L +++++ SS
Sbjct: 204 HIFQGKSNKHLLTTGWSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSAT 263
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
S+Q H +LA AS+A++T ++F V+Y+PR T S+FI+S+NKY+EA N+KF +GMR+
Sbjct: 264 SNQIRH-SLLAVASYAISTGSLFCVFYEPR--TSRSEFIVSVNKYIEARNHKFCIGMRFL 320
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
MRFEGE+ P R +GT+V +E SP W DS+WR KV+WDEP+ I P+RVSPWE+E
Sbjct: 321 MRFEGEEVPIERINGTIVSMET-SPRWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENIS 379
Query: 357 ASATPNLVQPVLAKNKRPRLS----MEVPP 382
+S+ P + + KR R S ME+ P
Sbjct: 380 SSSQP------VPRTKRSRSSSPGAMEISP 403
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 513 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 572
+ + T SAPS E +S +SD S+ A + +K + ++
Sbjct: 475 VVYVTESAPSVN---KDFGMEEDGCPVLSLENESDQHSETANINQSEKLSVISCDTEKLC 531
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEI 631
SK+ + +V+MQG+A+GR++DLT ++ LI ELE MF+I+G+L T KW I
Sbjct: 532 SKKQITSC----AEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLI 587
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
VYTD + +M LVGD W CNMVK+I I
Sbjct: 588 VYTDADSEMKLVGDYQWEVVCNMVKKILI 616
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/371 (58%), Positives = 260/371 (70%), Gaps = 42/371 (11%)
Query: 50 QLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ------ 102
Q+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE Q
Sbjct: 27 QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86
Query: 103 NEPTTPDPC-------PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL--- 152
N + D PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 87 NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146
Query: 153 ----------------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
TMF VYYKPR T S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV
Sbjct: 267 TMFTVYYKPR--TSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGV 324
Query: 317 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNK 372
D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K
Sbjct: 325 GDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRA 381
Query: 373 RPRLSMEVPPL 383
RP + P L
Sbjct: 382 RPNVLASSPDL 392
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 18/183 (9%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 557
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 615 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 668
Query: 558 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ +E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 669 AQHDSAREKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 727
Query: 612 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 728 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 787
Query: 671 PGS 673
PG+
Sbjct: 788 PGA 790
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/382 (54%), Positives = 269/382 (70%), Gaps = 17/382 (4%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAS-TNQELNQR-IPLFRLPSK 71
N + ELW ACAGPL+ +P++G V YFPQGHMEQ+ S +Q L QR + + LP +
Sbjct: 28 NKTSICLELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQ 87
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-------RPKVHSFS 124
I CRV+N++L A+QETDEVYAQ+TL+PEP EP D + + H F
Sbjct: 88 IFCRVLNVNLHADQETDEVYAQVTLVPEP---EPAEKDLEEEEEDEEAGVLNKSTPHMFC 144
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG EWRF+HI+RGQPR
Sbjct: 145 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPR 204
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K L++GD +FLRGENGEL +G+R ARQQS +PSSV+SSQSMHLG
Sbjct: 205 RHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSMHLG 264
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLA+A++AVAT++MF ++Y PR ++F+I +KY+++ N ++GMR+KMRFE ED+
Sbjct: 265 VLASAANAVATKSMFHIFYNPR--ASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETEDT 322
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
ERR++G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ A N+
Sbjct: 323 AERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLNV 382
Query: 364 VQPVLAKNKRPRLSMEVPPLDL 385
+ KR + S+ P+D
Sbjct: 383 SSGT--RIKRLKTSLPSTPVDF 402
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Query: 504 SCRLFGIELINHATS--SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
SC+LFG LI + A S ++P + +T ++ S ++ + K+
Sbjct: 742 SCKLFGFSLIEESACIDDAISSRIPRAGVTMNFLHMAHDQEPVQSSILRNLDQPLKDLHD 801
Query: 562 EQVQVSPKESQSKQSCLTS--------NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
+ E Q ++ R TKV QG VGRA+DL+ L GYD LI EL
Sbjct: 802 HSEGLESSEHQITFQTISKVPTSVPALGRKCTKVHKQGNIVGRAVDLSKLDGYDELISEL 861
Query: 614 EEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
E +F+++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + ++V+KM+PG
Sbjct: 862 ERLFNMEGLLNDPEKGWQVVYTDNENDIMLVGDDPWQEFCNIVCKILIYTHEEVEKMAPG 921
Query: 673 SKLPMFSIEGE 683
MFS + +
Sbjct: 922 ----MFSDDAQ 928
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/388 (51%), Positives = 266/388 (68%), Gaps = 15/388 (3%)
Query: 1 MANRLGSLSQPSSNSDD-----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST 55
MAN +QP + LY +LWK CAGPL D+PK G+ VYYFPQG++EQL AS
Sbjct: 1 MANNQTMNAQPKFRGTEGVNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASA 60
Query: 56 NQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS 115
N L Q P+F + S+I C V++I L E TDEVYA+++LLP + E T P+ D+
Sbjct: 61 NDNLCQLKPIFDISSRIHCNVISIKLKVETNTDEVYAKVSLLPCSPEVEITFPN----DN 116
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
+ F+KVLTASD HG F + +K A ECLPPLDM+Q P+QE+VAKDLH + W+F
Sbjct: 117 NEQNIKYFTKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKF 176
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
KH FRG P+RHL T+GW FV K L GD+FVFLRGENGE VG+R + QQS M SSV
Sbjct: 177 KHTFRGTPKRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSV 236
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
IS +SMH G +A+AS+A+ T+ MF V+YKP ++S+FI++ +K+L+AVN KF R+
Sbjct: 237 ISKESMHHGFIASASNAIHTKCMFDVFYKP----KSSKFIVNCDKFLDAVNMKFNTSSRF 292
Query: 296 KMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
M+FEG D E +SGT+V +EDFS +WK S+WR+L+VQWDE A+I RP++VS WEIEP
Sbjct: 293 TMKFEGHDFNEIIYSGTIVKMEDFSIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPL 352
Query: 356 VASATPNLVQPVLAKNKRPRLSMEVPPL 383
+ S+ N+++ V+ NKR R E P+
Sbjct: 353 IPSS--NILKSVIQNNKRQREINEFGPI 378
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 22/185 (11%)
Query: 479 PHPSKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 537
P SKP+ ND +++ + T +S RLFG++L A+S A P+ S
Sbjct: 377 PIISKPDYNDQMVQSTKENSTTNASSSFRLFGVDLT--ASSKARDVLEPLESYQ------ 428
Query: 538 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 597
K+ ++ F+E+ +Q Q ++ ++ L+ S TKV M+GV R
Sbjct: 429 -----------KNKTSEIFEEENLDQTQAVTSLTEIQRKELSFTTSSTKVHMEGVT--RT 475
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 657
+DLT GY+H+I ELE++F+I+G+LH ++W++ + D EGDMMLVGDDPW +FCN+VK
Sbjct: 476 VDLTVFDGYNHMIVELEKLFNIEGKLHMHSQWKLTFKDHEGDMMLVGDDPWPKFCNIVKE 535
Query: 658 IFICS 662
I I S
Sbjct: 536 IVISS 540
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 258/366 (70%), Gaps = 41/366 (11%)
Query: 51 LEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP--------- 100
+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE
Sbjct: 49 VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108
Query: 101 SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL-------- 152
+ E P PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 109 VEEEEVVP---PAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLI 165
Query: 153 -----------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRL
Sbjct: 166 VAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRL 225
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
VAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTV 285
Query: 262 YYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 321
YYKPR T S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D P
Sbjct: 286 YYKPR--TSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDP 343
Query: 322 H-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRPRLS 377
W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP +
Sbjct: 344 SGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARPNVL 400
Query: 378 MEVPPL 383
P L
Sbjct: 401 ASSPDL 406
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 18/183 (9%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 557
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 629 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 682
Query: 558 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 683 AQHDSATEKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 741
Query: 612 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 742 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 801
Query: 671 PGS 673
PG+
Sbjct: 802 PGA 804
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/347 (58%), Positives = 256/347 (73%), Gaps = 13/347 (3%)
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKV 120
+ LP KILC V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+V
Sbjct: 3 FYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRV 62
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFR
Sbjct: 63 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 122
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS S
Sbjct: 123 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 182
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
MHLGVLATA HAV T TMF VYYKPR T ++F++ ++Y+E++ + +GMR+KMRFE
Sbjct: 183 MHLGVLATAWHAVNTGTMFTVYYKPR--TSPAEFVVPCDRYMESLKRNYPIGMRFKMRFE 240
Query: 301 GEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
GE++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V
Sbjct: 241 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV--- 297
Query: 360 TPNLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 403
+P + P+ + + KRPR + +P P+ +AP Q H L
Sbjct: 298 SPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 344
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 551 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 606
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 607 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 666
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 667 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 725
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/444 (50%), Positives = 298/444 (67%), Gaps = 25/444 (5%)
Query: 10 QPS-SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
QP+ N++ L E+W ACAGPLV +P+ G RV YFPQGH+EQ+ ASTNQ + ++P + L
Sbjct: 24 QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNL 83
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSF 123
PS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F
Sbjct: 84 PSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMF 139
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQP
Sbjct: 140 CKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQP 199
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMH 242
RRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMH
Sbjct: 200 RRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMH 259
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLA A+HAV+T+TMF ++Y PR ++F++ +KY++A + +VGMR+KMRFE E
Sbjct: 260 LGVLAAAAHAVSTKTMFTIFYNPR--ASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETE 317
Query: 303 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+S ERR+ GT+ GV D S W +SKWR L+V WDE + R +RVSPWEIEPF+A P
Sbjct: 318 ESSERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---P 374
Query: 362 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR------LAQSHNLTQLSVTAEDKRI 415
N+ P + + + P + P+ + SA+ L SH L S E R
Sbjct: 375 NVANPPTTQRVK-KFRPNTPANEFPTGKNNSDSAQAMHMRALQGSHALGMPSKEEEGLRG 433
Query: 416 DNHVA-WHHKHSDFSSNSNFMSRT 438
+ A W + D S RT
Sbjct: 434 SSPFAVWPYNRDDLKGESWIQLRT 457
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 19/174 (10%)
Query: 504 SCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
SC++FG LI A S P E S E + A S G + +
Sbjct: 597 SCKIFGFSLIEKSPPAASRNPEEARLNPSRGGE-QMTRCSGRAGPSAGNGSL-------E 648
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
E+ P + S ++C TKV +QG AVGRA+DL+ Y L+ EL+++F +
Sbjct: 649 HERCASRPASAWSLRTC-------TKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLD 701
Query: 621 GQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
L + W++VYTD+EGDM+LVGDDPW EFCNMV+ I I S +V+K++ G+
Sbjct: 702 NALDDPDSGWQVVYTDNEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGA 755
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 274/372 (73%), Gaps = 17/372 (4%)
Query: 10 QPS-SNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
QP+ N++ L E+W ACAGPLV +P+ G RV YFPQGH+EQ+ ASTNQ + ++P + L
Sbjct: 24 QPNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNL 83
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSF 123
PS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F
Sbjct: 84 PSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMF 139
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQP
Sbjct: 140 CKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQP 199
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMH 242
RRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMH
Sbjct: 200 RRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMH 259
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
LGVLA A+HAV+T+TMF ++Y PR ++F++ +KY++A + +VGMR+KMRFE E
Sbjct: 260 LGVLAAAAHAVSTKTMFTIFYNPR--ASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETE 317
Query: 303 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+S ERR+ GT+ GV D S W +SKWR L+V WDE + R +RVSPWEIEPF+A P
Sbjct: 318 ESSERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---P 374
Query: 362 NLVQPVLAKNKR 373
N+ P + R
Sbjct: 375 NVANPPTTQRAR 386
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/651 (37%), Positives = 340/651 (52%), Gaps = 161/651 (24%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +L K CAGPL D PK G E+L S N EL Q P+F +PSKI C V
Sbjct: 23 LNGQLLKLCAGPLFDTPKVG-----------EKLVTSINDELCQLKPIFDIPSKICCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I+L E T+++YA++ LLP+ S E P ++ ++ F+KVL+ASDT GG
Sbjct: 72 SINLKVENNTNDIYAEVALLPDTSDVEIPIP---KNENNIQNINYFTKVLSASDTCKTGG 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
F + ++HA ECLP LDM+Q TP+QE++AKD+HG++W FKH
Sbjct: 129 FVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------------- 169
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
LRGENGE VG+ A Q+ ++P+S IS QSMH GV+ATA + + +
Sbjct: 170 ------------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKNKC 217
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MFVV+YKPR +SQF+++ +K+++ VNNKF++G ++ M+FEG+D E R++GT+VGV
Sbjct: 218 MFVVFYKPR----SSQFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGTIVGVG 273
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
DFS HWKDS+WRSLKVQWD A+I RPD+V
Sbjct: 274 DFSTHWKDSEWRSLKVQWDGTATIPRPDKV------------------------------ 303
Query: 378 MEVPPLDLPSAASAPWSAR-LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 436
+PW L QS N+++ ++ID + S S
Sbjct: 304 -------------SPWEIEMLTQSSNISKSDYLKNKRQIDV----------YEFGSKMWS 340
Query: 437 RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG 496
T S G+ P ++ S + ST + N+ + + ++
Sbjct: 341 PTLSQGQESGQPSIQSSMRY------------------SFSTMY-----NEQMAQAMKET 377
Query: 497 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 556
T TSCRLFG++L+N AT+ P E + DS+ K I+K F
Sbjct: 378 STTTATTSCRLFGVDLVNPATTKDPVEPI-------------------DSNKKLKISKIF 418
Query: 557 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 616
+++K + VQ RS TKV M+GV + R +DLT GY LIDELE +
Sbjct: 419 EDEKIDHVQA---------------RSHTKVHMEGV-IERTVDLTIFDGYSQLIDELERL 462
Query: 617 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
FDIKG+LH KW++ + D+GDMM++GDDPW +FC M K IFICS + VK
Sbjct: 463 FDIKGELHMHNKWKMFFIYDDGDMMILGDDPWTKFCYMAKEIFICSKKGVK 513
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/358 (57%), Positives = 256/358 (71%), Gaps = 27/358 (7%)
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKV 126
+NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K
Sbjct: 1 MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRH
Sbjct: 61 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVL
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
ATA HAV T +MF VYYKPR T ++F++S ++Y E++ +++GMR+KMRFEGE++ E
Sbjct: 181 ATAWHAVNTDSMFTVYYKPR--TSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE 238
Query: 307 RRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V
Sbjct: 239 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVN 295
Query: 366 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 296 PLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 353
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 524 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 577
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 578 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 637
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 638 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 697
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 698 KIFIYTREEVERMNPGA 714
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 250/344 (72%), Gaps = 7/344 (2%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY ELW CAGPLV++ + GQ+V YFPQGH+EQ+EA TNQ+ +P++ LPSKI C
Sbjct: 28 NDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFC 87
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDT 132
+VV + L AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT
Sbjct: 88 KVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDT 146
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+THGGFSV ++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GW
Sbjct: 147 NTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGW 206
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FVTSK+LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA
Sbjct: 207 SQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHA 266
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T TMF VY++P + +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT
Sbjct: 267 ISTGTMFTVYFRPWT---SPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGT 323
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+VG+ED W +S+WR KVQWD P+RV+ W IEP
Sbjct: 324 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 367
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 506 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 564
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 533 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 584
Query: 565 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 623
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 585 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 644
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 645 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 691
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 250/344 (72%), Gaps = 7/344 (2%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+DDLY ELW CAGPLV++ + GQ+V YFPQGH+EQ+EA TNQ+ +P++ LPSKI C
Sbjct: 133 NDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFC 192
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDT 132
+VV + L AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT
Sbjct: 193 KVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDT 251
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+THGGFSV ++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GW
Sbjct: 252 NTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGW 311
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FVTSK+LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA
Sbjct: 312 SQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHA 371
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
++T TMF VY++P + +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT
Sbjct: 372 ISTGTMFTVYFRPWT---SPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGT 428
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+VG+ED W +S+WR KVQWD P+RV+ W IEP
Sbjct: 429 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 472
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 506 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 564
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 638 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 689
Query: 565 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 623
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 690 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 749
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 750 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 796
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/498 (42%), Positives = 297/498 (59%), Gaps = 61/498 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++G
Sbjct: 259 KCMFNVVYKPS----SSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIG 314
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 315 VNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH-- 370
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 435
W + ++ SN
Sbjct: 371 ---------------------------------------------WLQLNEIGATLSNLW 385
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVE 494
+ + + SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 386 TCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRK 443
Query: 495 TGRKTETGTSCRLFGIEL 512
TE TSC LFG++L
Sbjct: 444 EDITTEATTSCLLFGVDL 461
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 260/365 (71%), Gaps = 10/365 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRVVNI 79
E W ACAGPLV +P G RV YFPQGH+EQ+ ASTNQ + +IP + LPS+I CRV+N+
Sbjct: 75 EAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRVLNL 134
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A +ETDEVYAQ+TL+PE Q + + P S + K+ FSK LT+SDTSTHGGFS
Sbjct: 135 SLGAYRETDEVYAQMTLVPENEQLDQSLELDEPTASSKAKLSMFSKNLTSSDTSTHGGFS 194
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K
Sbjct: 195 VPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSQK 254
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
+LVAGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A+HAV+T+TM
Sbjct: 255 KLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHAVSTKTM 314
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVGV 316
F V+Y PR ++F++ +KY+++ +GMR+KMRFE EDS ER R+ GT+ G+
Sbjct: 315 FTVFYNPR--ASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSVRYMGTITGI 372
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV K RP
Sbjct: 373 GDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVSTKRFRPT 429
Query: 376 LSMEV 380
+ ++
Sbjct: 430 MLTDI 434
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 640
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 657 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQAVYVDNEGDM 714
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+LVGDDPW EFC+ V+ I I S +++K++
Sbjct: 715 LLVGDDPWEEFCSTVRCIRILSPAEIQKLT 744
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/372 (54%), Positives = 259/372 (69%), Gaps = 17/372 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL-NQRIPLFRLPSKILCRVVNI 79
E W ACAGPLV +P G RV YFPQGH+EQ+ ASTNQ + +IP + LPS+I CRV+N+
Sbjct: 75 EAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRVLNL 134
Query: 80 HLMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
L A +ETDEVYAQ+TL+PE Q + + P S + K+ F K LT+S
Sbjct: 135 SLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKNLTSS 194
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 195 DTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHLLTT 254
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATA 249
GWS FV+ K+LVAGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A
Sbjct: 255 GWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAA 314
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+HAV+T+TMF V+Y PR ++F++ +KY+++ +GMR+KMRFE EDS ERR+
Sbjct: 315 AHAVSTKTMFTVFYNPR--ASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERRY 372
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
GT+ G+ D P W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV
Sbjct: 373 MGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVS 429
Query: 369 AKNKRPRLSMEV 380
K RP + ++
Sbjct: 430 TKRFRPTMLTDI 441
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 640
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 664 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQTVYVDNEGDM 721
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+LVGDDPW EFC V+ I I S +++K++
Sbjct: 722 LLVGDDPWEEFCTTVRCIRILSPAEIQKLT 751
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 247/364 (67%), Gaps = 63/364 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+YRELW ACAGPLV VP++ RV+YFPQGH+EQ+EASTNQ Q++PL+ LPSK+LCRV+
Sbjct: 41 IYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 100
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHG
Sbjct: 101 NVDLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+SKRLVAGD F+FLR E
Sbjct: 221 SSKRLVAGDAFIFLRTSPSE---------------------------------------- 240
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F+V + Q++ S+ N +++GMR+KMRFEGE++PE+RF+GT+VG+
Sbjct: 241 --FIVPF--------DQYMESV-------KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 283
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
ED P W SKWRSLKV+WDE +SI RP+RVSPW+IEP +A P + PV + + KRP
Sbjct: 284 EDSDPTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALA---PPALSPVPMTRPKRP 340
Query: 375 RLSM 378
R +M
Sbjct: 341 RSNM 344
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 504 SCRLFGIELINHA--TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+CRLFGI L+N+ T S S++ ++ G D S +K + ++
Sbjct: 571 NCRLFGIPLVNNVNETDSTMSQRNNLNE--NSGFTQMASPKVQDLSDHSKGSKSTNDHRE 628
Query: 562 EQVQVSPKESQSKQS-CLT-SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 619
+ K+ +K S C T SNRS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 629 QGRPSQAKQPHAKDSHCKTNSNRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEF 688
Query: 620 KGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+ M+P
Sbjct: 689 NGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRNMNP 741
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/356 (52%), Positives = 255/356 (71%), Gaps = 20/356 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LWK CAGPL D PK G E+L AS + EL Q P+F +PSKI C V
Sbjct: 23 LNDKLWKLCAGPLFDTPKIG-----------EKLVASMDDELCQLKPIFDIPSKICCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+I+L E T+E+YA+++LLP+ S E P ++ ++ F+KVL+ASDTST+GG
Sbjct: 72 SINLKVEPSTNEIYAEVSLLPDTSDVEIPIPK---NENNIQNINYFTKVLSASDTSTNGG 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
F + ++HA ECLP LDM+Q TP+QE++AKD+HG+EW FKH RG P+RHL T+GW+ F
Sbjct: 129 FVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSGWNEFAK 188
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
K+LVAGD+FVFLRGENGE VG+ A QQ ++P+S+IS +SMH V+ATA +A+ +
Sbjct: 189 GKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATALNAIENKC 248
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MFVV+YKP R+SQFI++ +K+++ VNNKF++G ++ M+FEG+D E R++GTVVGV
Sbjct: 249 MFVVFYKP----RSSQFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIRYNGTVVGVR 304
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
DFS HWKDS+WRSL+VQWDE A+I RPD+VSPWEIE S+ N+ + K+KR
Sbjct: 305 DFSTHWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSS--NIFKSDALKHKR 358
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 35/182 (19%)
Query: 486 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 545
N+ +++ ++ T TSCRLFG++L+ A + P E +
Sbjct: 376 NEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDPVEPIV------------------- 416
Query: 546 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
S+ K I+K F+++K + VQ +SRTKV M+GV + R +DLT G
Sbjct: 417 SNKKCKISKIFEDEKVDHVQA---------------KSRTKVHMEGV-IERTVDLTIFDG 460
Query: 606 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
Y+ LIDELE +FDIKG+LH KW++ + ++GDMM++GDDPW +FCNM K IFICS +D
Sbjct: 461 YNQLIDELERLFDIKGELHMHNKWKMFFIYNDGDMMILGDDPWPKFCNMAKEIFICSKED 520
Query: 666 VK 667
VK
Sbjct: 521 VK 522
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/275 (68%), Positives = 217/275 (78%), Gaps = 1/275 (0%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIP 64
G+ + P SD LY+ELW ACAGPLV VP+QG+RVYYFPQGHMEQLEAS + Q+L+Q +P
Sbjct: 7 GAAAGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLP 66
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 124
+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T+ D P + + HSF
Sbjct: 67 MFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFC 126
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+
Sbjct: 127 KTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPK 186
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLG
Sbjct: 187 RHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLG 246
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLN 279
VLATASHA++T T+F V+YKPR I L
Sbjct: 247 VLATASHAISTGTLFSVFYKPRFDVVLLYLYICLQ 281
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 252/351 (71%), Gaps = 19/351 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAST-----NQELNQRIPLFRLPSK 71
DLY ELW ACAGPLV VP+ G +V+YFPQGHMEQ+ ST N+E +P++ LP K
Sbjct: 1 DLYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYDLPYK 60
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSK 125
ILC+VV++ L AE TDEV+A+ITLLP ++E ++ D +H SF+K
Sbjct: 61 ILCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNK----DGKSLPLHRKTCARSFTK 116
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LT SDT THGGFSV ++HA +CLPPLD +Q P QEL+AKDLHG+EW FKHI+RGQP+R
Sbjct: 117 KLTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKR 176
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HL+T+GWSTFV+SKRLVAGD+F+FLRGE+GEL VGVR + ++++ ++++SS SM LG+
Sbjct: 177 HLITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGI 236
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L++ASHA+ T +MF +Y+ P T ++FII ++Y+++ ++ G R++M FEGE+
Sbjct: 237 LSSASHAITTGSMFTIYFHP--WTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEECA 294
Query: 306 ERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPAS-ITRPDRVSPWEIEP 354
E+RF GTVVG ED W +S+WR LKV+WD + +RVSPW IEP
Sbjct: 295 EQRFEGTVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEP 345
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 274/405 (67%), Gaps = 48/405 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE---------------------------- 52
ELW ACAGPL+ +P +G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMAEEASS 97
Query: 53 --------ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE 104
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ +NE
Sbjct: 98 AAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKNE 157
Query: 105 PTTPDPC---PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
+ P+ +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+Q
Sbjct: 158 KCMEEQLSVPPSSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQ 213
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
ELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+
Sbjct: 214 ELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGI 273
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
R ++QQSS+PSSV+SS +H GVLA +HAVAT++MF +YY PR T ++F+I +KY
Sbjct: 274 RRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPR--TSPTEFVIPYHKY 331
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 340
+++ N+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+
Sbjct: 332 VKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAA 391
Query: 341 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 385
R DRVSPWEIEPF ++ N + + KR R S P DL
Sbjct: 392 QERQDRVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPSAPTDL 434
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 25/199 (12%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS-DGKSDIA--- 553
K + +C+LFG L+ + P++S TE + S S DG A
Sbjct: 695 KVKGERNCKLFGFSLLKESVCV----DDPINSAMTEDGVSSEGGLHVPSGDGPLQTAHSK 750
Query: 554 ------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 601
KE ++ + E ++ + S S RS TKV QG AVGRA+DL+
Sbjct: 751 DSDQSEKELHNHYGHEITLRSVEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLS 810
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW EFCN+V +I I
Sbjct: 811 KLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILI 870
Query: 661 CSSQDVKKMSPGSKLPMFS 679
C+ ++V+KM+PG MFS
Sbjct: 871 CTQEEVQKMTPG----MFS 885
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/402 (51%), Positives = 272/402 (67%), Gaps = 42/402 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE---------------------------- 52
ELW ACAGPL+ +P +G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMAEEASS 97
Query: 53 --------ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE 104
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ ++E
Sbjct: 98 AASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSE 157
Query: 105 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 164
+ P P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELV
Sbjct: 158 KCIEEQLPV-PPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELV 216
Query: 165 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 224
AKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+R
Sbjct: 217 AKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRA 276
Query: 225 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEA 284
++QQSS+PSSV+SS +H GVLA +HAVAT++MF ++Y PR T ++F+I +KY+++
Sbjct: 277 SQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPR--TSPTEFVIPYHKYVKS 334
Query: 285 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 343
N+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+ R
Sbjct: 335 FNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVGWDEHAAQER 394
Query: 344 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 385
+RVSPWEIEPF ++ N + + KR R S P DL
Sbjct: 395 QERVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPTAPTDL 434
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 115/218 (52%), Gaps = 25/218 (11%)
Query: 486 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTIS---- 541
++T Q + K + +C+LFG L+ + P+SS TE + S
Sbjct: 684 SETPCPQAKDISKVKGERNCKLFGFSLLKESACV----DDPISSAMTEDGVSSDGGLHVP 739
Query: 542 ------AAADSDGKSDIAKEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQM 589
A S KE ++ + E ++ + S S RS TKV
Sbjct: 740 PGDGPFQTAHSKHSDQSEKELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHK 799
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 648
QG AVGRA+DL+ L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW
Sbjct: 800 QGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPW 859
Query: 649 HEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDIL 686
EFCN+V +I IC+ ++V+KM+PG MFS + +
Sbjct: 860 QEFCNIVCKILICTQEEVQKMTPG----MFSEDAQSCF 893
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/373 (50%), Positives = 251/373 (67%), Gaps = 8/373 (2%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSK 71
N + ELW ACAGPL+ +PK+G V YFPQGH+EQL ++ Q+ P+ + LP +
Sbjct: 33 NKSSICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQ 92
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEP---SQNEPTTPDPCPADSPRPKVHSFSKVLT 128
I CRV+N++L+A+QETDEV+AQ+TL+PEP N + + +P +H F K LT
Sbjct: 93 IFCRVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLSKPTLHMFCKTLT 152
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 153 ASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLL 212
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV+ K L +FLRGENGEL +G+R R+ SS+PSSV S Q+++L V+A
Sbjct: 213 TTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAA 272
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A++AVAT++MF ++Y PR ++FII KY+ + VG R++M+FE ED+ E+R
Sbjct: 273 ATNAVATKSMFHIFYNPR--ASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAEKR 330
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
++G V + D P W SKWRSLKV WDE + R +RVSPWEIEP +A + N+
Sbjct: 331 YTGIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNVSSGT 390
Query: 368 LAKNKRPRLSMEV 380
K R L + V
Sbjct: 391 RCKRLRANLPVSV 403
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 19/188 (10%)
Query: 504 SCRLFGIELINHATSSAPSEK--------VPVSSLTTEGHIISTISAAADSDGKSDIAKE 555
SC+LFGI L A +EK + + S TT+ HI ++ + + K
Sbjct: 724 SCKLFGISLTEELPCVAVTEKGDFGKHEGMDIKSFTTKSHI--NFGSSPNYFSHPEPFKG 781
Query: 556 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
FKE+ ++S ++ S T R TKV QG VGRA+DL+ GYD LI+ELE
Sbjct: 782 FKER----AKLSTEQEISFPIQPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELER 837
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
+FD++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + +V+K+ PG
Sbjct: 838 LFDMEGLLNNPEKGWQVVYTDNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKLRPG-- 895
Query: 675 LPMFSIEG 682
MFS E
Sbjct: 896 --MFSDEA 901
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/365 (50%), Positives = 255/365 (69%), Gaps = 16/365 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ----ELNQ-RIPLFRLPSKILCR 75
ELW ACAGPL+ +PK+G V YFPQGH+EQ+ A+++ E +Q R+ + LP +I CR
Sbjct: 50 ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQIFCR 109
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTA 129
V+++ L A+QE D+VYAQ+TLLPE NE + + ++ H F K LTA
Sbjct: 110 VLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFCKTLTA 169
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLT
Sbjct: 170 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLT 229
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL +L+ A
Sbjct: 230 TGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSILSPA 289
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E+R
Sbjct: 290 ANALSTKSMFHVFYSPR--ASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKRC 347
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+G + G D P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L PV
Sbjct: 348 TGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSCPVA 405
Query: 369 AKNKR 373
+ KR
Sbjct: 406 PRIKR 410
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 193/384 (50%), Positives = 255/384 (66%), Gaps = 18/384 (4%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
+AN + S +Q D LY ELW+ACAG V VP+ RV+YFPQGH+EQ+ A T + +
Sbjct: 394 IANDVSSFTQHPCVQDILYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPD 453
Query: 61 Q--RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----EPTTPDPCPA 113
IP++ LPSKILC+++N+ L AE +DEVYAQ+TL+PE ++ E D P+
Sbjct: 454 SHLEIPVYDLPSKILCKIMNVELKAEAYSDEVYAQVTLVPEVQKDNLCFEEEVNIDQIPS 513
Query: 114 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 173
R +SFSK+LT SDTSTHGGFSV +K+A EC PPLDM TP QE+VAKDL+G+EW
Sbjct: 514 ---RNAAYSFSKILTPSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEW 570
Query: 174 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS--SM 231
RF+HI+RGQP+RHLLT+GWS FV +K+LVAGD+ +F+RGE+GEL VG+R A S S
Sbjct: 571 RFRHIYRGQPKRHLLTSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQ 630
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAV 291
SS+IS SM LG+L AS+AV +TMF+VYY+P T +FI+ L YL++ + +
Sbjct: 631 SSSLISGHSMQLGILTNASNAVGNRTMFLVYYRP--WTNPFEFIVHLQTYLKSTLQDYPI 688
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPA-SITRPDRVSP 349
G R +M+ E E+S RR +GT++G ED S W S WR LKVQWD P+RV P
Sbjct: 689 GTRVQMQHEVEES-LRRLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCP 747
Query: 350 WEIEPFVASATPNLVQPVLAKNKR 373
W IEP ++ V P L K+
Sbjct: 748 WWIEPLESAKEKKQV-PALPTKKK 770
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 566 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 625
V+P ++ K C+ +NRS TKV G A+GRA+DL GY LI EL+ MFD +G L +
Sbjct: 950 VAPGKTCKKCRCV-NNRSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLIS 1008
Query: 626 -RTKWEIVYTDDEGDMMLVGDDPWH 649
+ W + DDEGDMM +GD PW
Sbjct: 1009 GGSGWHVTCLDDEGDMMQLGDYPWQ 1033
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/384 (48%), Positives = 246/384 (64%), Gaps = 23/384 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ+ A ++ +P F L +I C+VV
Sbjct: 44 IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-APSSPFSPMEMPTFDLQPQIFCKVV 102
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------------DPCPADSPRPKVHSF 123
N+ L+A +E DEVY Q+ LLP+P P PA S H F
Sbjct: 103 NVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKS---TPHMF 159
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 219
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWS FV+ K LV+GD +FLRGE+GEL +G+R R ++ +P SVI Q+ +
Sbjct: 220 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYP 279
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
VL+ ++A++T++MF V Y PR + F++ KY++++ N +G R+KMRFE +D
Sbjct: 280 SVLSVVANAISTKSMFNVLYSPR--ASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDD 337
Query: 304 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
SPERR SG V G+ D +P+ W +SKWR L V+WDE +RVSPWEI+P V + P
Sbjct: 338 SPERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSV--SLPP 395
Query: 363 LVQPVLAKNKRPRLSMEVPPLDLP 386
L + K+ R S++ P D P
Sbjct: 396 LSIQSSPRLKKLRTSLQATPPDNP 419
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 628
ES + S + RS TKV QG VGRA+DL+ L GY L+ ELE +F ++G L K
Sbjct: 654 ESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG 713
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
W I+YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 714 WRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 757
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 246/360 (68%), Gaps = 11/360 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LP ++C++ NI
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
+ R+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVE 317
++Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG
Sbjct: 267 TIFYNPR--ASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSG 324
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 374
D P W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 325 DLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPAELSHMN 795
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 246/360 (68%), Gaps = 11/360 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LP ++C++ NI
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
+ R+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVE 317
++Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG
Sbjct: 267 TIFYNPR--ASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSG 324
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 374
D P W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 325 DLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHMN 795
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/381 (48%), Positives = 241/381 (63%), Gaps = 42/381 (11%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW CAG L +PK+G V YFPQGH+EQ AS++ I F LP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 78 NIHLMAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSP 116
N+ L+A +E DEVY Q+TLLP+P PT P
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP------ 164
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+
Sbjct: 165 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 220
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I
Sbjct: 221 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSII 280
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
+Q+ + VL+ A++AVAT++MF V+Y PR ++F+I KY++++ N ++G R+K
Sbjct: 281 GNQNSYPNVLSLAANAVATKSMFHVFYSPR--ASHAEFVIPYQKYVKSITNPISIGTRFK 338
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
MR++ +DSPERR SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+P
Sbjct: 339 MRYDMDDSPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPS 398
Query: 356 VASATPNLVQPVLAKNKRPRL 376
V+ P L+ PRL
Sbjct: 399 VS-------LPPLSIQSSPRL 412
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
+ RS TKV QG VGRA+DL+ L GY L ELE +F ++G L K W+I+YTD E
Sbjct: 667 SGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQILYTDSE 726
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
DMM+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 727 NDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 761
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/532 (38%), Positives = 288/532 (54%), Gaps = 88/532 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MF V YKPR M+FEG+D E+R+ GT++G
Sbjct: 259 KCMFNVVYKPR------------------------------MQFEGKDFSEKRYDGTIIG 288
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 289 VNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH-- 344
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 435
W + ++ SN
Sbjct: 345 ---------------------------------------------WLQLNEIGATLSNLW 359
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVE 494
+ + + SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 360 TCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRK 417
Query: 495 TGRKTETGTSCRLFGIELIN-HATSSAPSEKVPVSSLTTEGHIISTISAAAD 545
TE TSC LFG++L H A S V ++++ +I + D
Sbjct: 418 EDITTEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFD 469
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 571 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 630
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 481
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 482 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/389 (48%), Positives = 244/389 (62%), Gaps = 42/389 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMR 294
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPR--AYHAQFIISCQKYVKSINNPVSVGTR 338
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+KMRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+
Sbjct: 339 FKMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEID 396
Query: 354 PFVASATPNLVQPVLAKNKRPRLSMEVPP 382
P V + P L + K+ R S++ P
Sbjct: 397 PSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 671 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 730
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 731 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 765
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 176/344 (51%), Positives = 238/344 (69%), Gaps = 29/344 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY +LWK CAGPL D PK G E+L S N EL Q P+F +PSKI C V
Sbjct: 23 LYDQLWKLCAGPLFDPPKIG-----------EELVTSINDELCQLKPVFNIPSKIRCNVF 71
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+I L E TDE+YA+I+LLP+ S+ E PT+ ++ + F+KVL+ASDTS G
Sbjct: 72 SIKLKVETTTDEIYAEISLLPDTSEVEIPTSK----CENNIQNIKCFTKVLSASDTSKKG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GF + ++HA ECLPPLDM+ TP+QE+ A D+HG+EW+FKH +G P+RHL T+GW+ F
Sbjct: 128 GFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTSGWNEFA 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLA-RQQSSMPSSVISSQSMHLGVLATASHAVAT 255
+K+LV GD+F+FLRGENGE VG++ A QQ ++PSS+IS +SMH GV+ATA +A+
Sbjct: 188 KAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATALNAIKN 247
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MFVV+YKP R+SQF+++++K+ + VN KF++G R+ M+FEG+D E
Sbjct: 248 KCMFVVFYKP----RSSQFVVNIDKFRDGVNKKFSIGSRFLMKFEGKDFNEIS------- 296
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
E F PHWKDS+WR L+VQWDE A+I RPD+VSPWEIEP S+
Sbjct: 297 -ERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLTHSS 339
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 40/210 (19%)
Query: 482 SKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 540
SKPN N+ +++ ++ T TS RLFG++L KVP + + I
Sbjct: 377 SKPNYNEQMVQAMKETSTTTATTSYRLFGVDL-----------KVPAKTKDSIEPI---- 421
Query: 541 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 600
+S KS I+K F+E+K + +Q RS TKV+M+G A+ R +DL
Sbjct: 422 ----NSYKKSKISKIFEEEKVDHIQT---------------RSHTKVRMEG-AMERTVDL 461
Query: 601 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+ GY+ LIDELE +FDIKG+LH +W+IV+ + +GD+ML+GDDPW +FCN + IFI
Sbjct: 462 SIFDGYNQLIDELERLFDIKGKLHIHNQWKIVFINADGDIMLLGDDPWPKFCNTAEEIFI 521
Query: 661 CSSQDVKKMSPGSKLPMFSIEGEDILLSSD 690
CS D K +K EG+ IL +++
Sbjct: 522 CSKNDAKVGDADNKFS----EGDPILTTTN 547
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/389 (48%), Positives = 244/389 (62%), Gaps = 42/389 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMR 294
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAY--HAQFIISCQKYVKSINNPVSVGTR 338
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+KMRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+
Sbjct: 339 FKMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEID 396
Query: 354 PFVASATPNLVQPVLAKNKRPRLSMEVPP 382
P V + P L + K+ R S++ P
Sbjct: 397 PSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/498 (40%), Positives = 276/498 (55%), Gaps = 87/498 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 195
+ +++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MF V YKPR M+FEG+D E+R+ GT++G
Sbjct: 259 KCMFNVVYKPR------------------------------MQFEGKDFSEKRYDGTIIG 288
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
V D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 289 VNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH-- 344
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 435
W + ++ SN
Sbjct: 345 ---------------------------------------------WLQLNEIGATLSNLW 359
Query: 436 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVE 494
+ + + SP + + + AI+D+K +S HS + P+ + N+D +++ +
Sbjct: 360 TCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRK 417
Query: 495 TGRKTETGTSCRLFGIEL 512
TE TSC LFG++L
Sbjct: 418 EDITTEATTSCLLFGVDL 435
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 250/362 (69%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 610 IDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
++EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF N V I I S Q+V+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 668 KM 669
+M
Sbjct: 860 QM 861
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 250/362 (69%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 653 NMVKRIFICSSQDVKKM 669
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/389 (48%), Positives = 244/389 (62%), Gaps = 42/389 (10%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + + F L ILCRV+N
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 79 IHLMAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPAD 114
+HL+A +E DEVY Q+TL P P S PT P
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTP---- 166
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWR
Sbjct: 167 ------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMR 294
++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAY--HAQFIISCQKYVKSINNPVSVGTR 338
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+KMRFE +DSPER+F+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+
Sbjct: 339 FKMRFEMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEID 396
Query: 354 PFVASATPNLVQPVLAKNKRPRLSMEVPP 382
P V + P L + K+ R S++ P
Sbjct: 397 PSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 250/362 (69%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 653 NMVKRIFICSSQDVKKM 669
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 242/347 (69%), Gaps = 13/347 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP++++C++
Sbjct: 22 LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASD
Sbjct: 82 HNVTMHADNETDEVYAQMTLQPLSAQEQK---DVCLLPAELGMPSKQPTNYFCKTLTASD 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+H+FRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFS 310
A AT + F ++Y PR S F+I L KY +AV + + +VGMR++M FE E+S RR+
Sbjct: 259 AAATNSRFTIFYNPR--ASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYM 316
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 363
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 539 TISAAADSDGKSDIAKEFKEKKQEQVQVSPK-ESQSKQSCLTSNRSRTKVQMQGVAVGRA 597
T S AD A F+ VQ S + S + Q ++ R+ KV G VGR+
Sbjct: 668 TTSVVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTPRTFIKVYKSGY-VGRS 726
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
LD+T + Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 727 LDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNV 786
Query: 656 KRIFICSSQDVKKM 669
I I S +DV+K+
Sbjct: 787 WYIKILSPEDVQKL 800
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNY-FCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 643
KV G VGR LD+T Y L E+ +F ++GQL R+ W++V+ D E D++LV
Sbjct: 781 KVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 839
Query: 644 GDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
GDDPW EF N V I I S Q+V++M PG +L
Sbjct: 840 GDDPWQEFVNSVSCIKILSPQEVQQMGKPGIEL 872
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 179/380 (47%), Positives = 245/380 (64%), Gaps = 30/380 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR-----LPSKILCR 75
ELW+ACAGP++ +P++G V YFPQGH+EQ P FR +P + CR
Sbjct: 33 ELWRACAGPVISLPRKGTIVVYFPQGHLEQ------------APKFRAFAHDIPPHLFCR 80
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------HSFSKVL 127
V+N++L AE TDEVYAQ++L+PEP + + + ++ H F K L
Sbjct: 81 VLNVNLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTL 140
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 141 TASDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 200
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRGENGEL +G+R AR + +P S++ SQ+++L LA
Sbjct: 201 LTTGWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALA 260
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
S AV+T++MF VYY PR ++FII K+ +++N ++G R+KMR+E ED+ E+
Sbjct: 261 AVSTAVSTKSMFHVYYNPR--ASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQ 318
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
R +G + G+ D P W SKWR L V+WDE A D+VSPWEIEP + + P
Sbjct: 319 RPTGLITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEP--SGSLSGFSSP 376
Query: 367 VLAKNKRPRLSMEVPPLDLP 386
+ +K+PR+S+ D P
Sbjct: 377 LTPGSKKPRISLPSIKADFP 396
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 17/173 (9%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
GTSCRLFG L A + + PV+S + + + T A+S KQ
Sbjct: 647 GTSCRLFGFPLTKEAPVANTVDPTPVASQSAKDLDLKTCLPTANS---------MIPGKQ 697
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+V + S T+ RS TKV QG VGRA+DL+ L GYD LI ELE +F+++G
Sbjct: 698 LHAEV-------QSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEG 750
Query: 622 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
L+ K W++VYTDDE DMMLVGDDPW EFCN+V +I I + +V+ M PG
Sbjct: 751 LLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGG 803
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 250/357 (70%), Gaps = 12/357 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSPESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQP-T 126
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 127 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M F
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
E E+S RR+ GT+ G+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 305 ETEESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 765 VKVYKSG-SLGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 823
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 689
VGDDPW EF N V I I S QDV++M G + S G +L SS
Sbjct: 824 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGG-DLLSAPGARMLQSS 869
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/387 (47%), Positives = 241/387 (62%), Gaps = 38/387 (9%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + +P + L +I CRVVN
Sbjct: 48 YIELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTYDLQPQIFCRVVN 106
Query: 79 IHLMAEQETDEVYAQITLLP---------------------EPSQNEPTTPDPCPADSPR 117
I L+A +E DEVY Q+TLLP E ++ PT P
Sbjct: 107 IQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTP------- 159
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
H F K LTASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EW+F+H
Sbjct: 160 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRH 216
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
I+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S++
Sbjct: 217 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVG 276
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
SQS + L++ ++A++ ++MF V+Y PR + F + KY++++ N +G R+KM
Sbjct: 277 SQSYYPNFLSSVANAISAKSMFHVFYSPR--ASHADFAVPYQKYIKSIKNPVTIGTRFKM 334
Query: 298 RFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE I DRVSPWE++P
Sbjct: 335 KFEMDESPERRCTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDP- 393
Query: 356 VASATPNLVQPV-LAKNKRPRLSMEVP 381
AS P +Q K RP L P
Sbjct: 394 SASLPPLSIQSSRRLKKLRPGLLAAAP 420
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
Query: 548 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
GK + K F + ++ SK+SC TKV QG VGRA+DL+ L Y+
Sbjct: 637 GKVNACKLFGFPLSRETTAQNLQNSSKRSC-------TKVHKQGSLVGRAIDLSRLSSYN 689
Query: 608 HLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC++V +I I + ++V
Sbjct: 690 DLLIELERLFSMEGLLIDPNKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIHTQEEV 749
Query: 667 KKMSPG 672
+KM+ G
Sbjct: 750 EKMTIG 755
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 182/386 (47%), Positives = 244/386 (63%), Gaps = 17/386 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQL AS++ ++ +P F L +I C+VV
Sbjct: 38 IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQL-ASSSPFSHRDMPNFDLHPQIFCKVV 96
Query: 78 NIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSKV 126
N+ L+A +E DEVY ++TLLP+P Q + A + H F K
Sbjct: 97 NVQLLANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKT 156
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C P LD Q P+QEL+AKDLHG EWRF+HI+RGQPRRH
Sbjct: 157 LTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRH 216
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV+ K LV+GD +FLRGE GEL +G+R AR ++ +P SV Q+ L
Sbjct: 217 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSAL 276
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
+ S+A++T+++F V Y PR + F++ KY++++ N +G R+KMRFE +DSPE
Sbjct: 277 SLVSNAISTKSVFTVSYSPR--ATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPE 334
Query: 307 RRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
RR SG V G D P+ W +SKWR L V+WDE +RVSPWEI+ V + P L+
Sbjct: 335 RRCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASV--SLPPLII 392
Query: 366 PVLAKNKRPRLSMEVPPLDLPSAASA 391
+ K+ R ++ P D P A
Sbjct: 393 QSSPRLKKLRTGLQAAPPDKPIAGGG 418
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDE 637
TS RS TKV QG VGRA+DL+ L GY L++ELE +F ++G L W I+YTD E
Sbjct: 592 TSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSE 651
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D+M+VGDDPW EFCN+ +I I + ++V+KM+
Sbjct: 652 NDVMVVGDDPWLEFCNVATKIHIYTQEEVEKMT 684
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 208/261 (79%), Gaps = 5/261 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
PR SF K LTASDTSTHGGFSVLR+HA ECLPPLDMNQ P QELVAKDLHG W F
Sbjct: 11 PRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHF 70
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
+HIFRGQPRRHLLTTGWS FV+SKRL+AGD F+FLRG+NGEL VGVR RQQ+++ SSV
Sbjct: 71 RHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSV 130
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
ISS SMHLGV+ATASHAV+T TMF VYYKPR T S FII KY+EA+NN F+VGMR+
Sbjct: 131 ISSHSMHLGVVATASHAVSTHTMFTVYYKPR--TSPSGFIIPYEKYMEAMNNNFSVGMRF 188
Query: 296 KMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
KMRFEGE++PE+RF GT++G D P W SKWRSLKVQWDE + + RP+RVSPWEIE
Sbjct: 189 KMRFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE- 247
Query: 355 FVASATPNLVQPVLAKNKRPR 375
+A+A PV ++NKRPR
Sbjct: 248 LIATAAALSPLPV-SRNKRPR 267
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 23/215 (10%)
Query: 493 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST------ISAAADS 546
E G + +C+LFG +L++++ S + V + S+T E + +S A+
Sbjct: 537 TEMGPTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQPAEL 596
Query: 547 DGKSDIAKEFKE-------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 599
D +S+ +K K ++++ Q S KE+Q + S RS TKVQ QG A GRA+D
Sbjct: 597 DQQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFRAES-NSFRSHTKVQKQGSAFGRAVD 655
Query: 600 LTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWH--------E 650
L GY I ELE+MF+I+G+L R W +VYTD+EGDMMLVGD PW E
Sbjct: 656 LMKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDHPWQEFLHPINRE 715
Query: 651 FCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI 685
FC + +I+I + ++V+KM+P L IEG +
Sbjct: 716 FCRIAHKIYIYTREEVEKMTPWQTLDGKKIEGRSV 750
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 187/357 (52%), Positives = 251/357 (70%), Gaps = 12/357 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSPESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q +P P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R +R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M F
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
E E+S RR+ GT+ G+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 305 ETEESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 766 VKVYKSG-SLGRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDVLL 824
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 689
+GDDPW EF N V I I S QD+++M+ G + S G +L S
Sbjct: 825 LGDDPWQEFVNSVGCIKILSPQDLQQMARGGGGDLLSAPGARMLQGS 871
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 247/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 41 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQLICQL 100
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ET+EVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 101 HNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQPTNY-FCKTLTASDTST 159
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 160 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 219
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 220 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 279
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 280 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 337
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 338 TGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLK 395
Query: 373 RP 374
RP
Sbjct: 396 RP 397
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 804 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFA 863
Query: 653 NMVKRIFICSSQDVKKM 669
+ V I I S Q+V++M
Sbjct: 864 STVSCIKILSPQEVQQM 880
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 88 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 325 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 382
Query: 373 RP 374
RP
Sbjct: 383 RP 384
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 799 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 858
Query: 653 NMVKRIFICSSQDVKKM 669
+ V I I S Q+V++M
Sbjct: 859 STVSCIKILSPQEVQQM 875
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 246/362 (67%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + + RVS WEIEP + P P K
Sbjct: 324 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 594 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 651
VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 790 VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEF 849
Query: 652 CNMVKRIFICSSQDVKKMS-PGSKL 675
N V I I S ++V++M PG +L
Sbjct: 850 VNSVSCIKILSPEEVQQMGKPGIQL 874
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/342 (53%), Positives = 240/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 NSCFTVFYNPR--ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 580 SNRSRTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 635
SN +RT V++ +VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 706 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 765
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 766 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 799
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 253/383 (66%), Gaps = 21/383 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTAS
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASG 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFS 310
A AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+
Sbjct: 259 AAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 316
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P
Sbjct: 317 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFSL 374
Query: 370 KNKRPRLSMEVPPLDLPSAASAP 392
+ KRP P LPS P
Sbjct: 375 RLKRPW------PSGLPSLTGFP 391
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
+NR KVQ G + GR+LD++ Y L EL MF ++G L R+ W++V D E
Sbjct: 755 TNRIFVKVQKSG-SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRE 813
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW EF N V I I S +V++M
Sbjct: 814 NDVLLLGDDPWQEFVNNVWYIKILSPYEVQQM 845
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 247/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 18 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 77
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 78 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTST 136
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 137 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 196
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 256
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 257 TNSRFTIFYNPR--ASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 314
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + + RVS WEIEP + P P K
Sbjct: 315 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLK 372
Query: 373 RP 374
RP
Sbjct: 373 RP 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 776 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 834
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 835 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 868
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 245/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E+N +IP + LP++++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KYL+AV + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D W +S+WRS+KV WDE R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPL--TTFPTYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E D
Sbjct: 751 RTFVKVYKSG-SFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDREND 809
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GD PW EF N V I I S Q+V++M
Sbjct: 810 VLLLGDGPWPEFVNSVWYIKILSPQEVQQM 839
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 247/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + + RVS WEIEP + P P K
Sbjct: 324 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 785 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 843
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 844 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 877
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 241/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+EL+ IP + LP +++C +
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLICPL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F+V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFIVFFNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 584 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 640
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDV 776
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 248/365 (67%), Gaps = 15/365 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSAQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+H
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFS 310
A AT + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+
Sbjct: 259 AAATNSRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYM 316
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P
Sbjct: 317 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSL 374
Query: 370 KNKRP 374
+ KRP
Sbjct: 375 RLKRP 379
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+NR+ KV G + GR+LD++ Y L EL MF ++G L R+ W++V+ D E
Sbjct: 753 TNRTFVKVHKSG-SFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPERSGWQLVFVDRE 811
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP-GSKLP 676
D++L+GDDPW EF N V I I S +V++M G LP
Sbjct: 812 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDLP 851
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 247/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEV AQ+TL P Q +P P + +P + F K LTASDTST
Sbjct: 87 HNVIMHADAETDEVCAQMTLQPLSPQELKDPFLPAELGTANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F+++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTIPMYSSPFPMRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G AVGR LD+T Y L EL +F ++GQL R+ W++V+ D E D++L
Sbjct: 786 VKVYKSG-AVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLL 844
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
VGDDPW EF N V I I S Q+V++M
Sbjct: 845 VGDDPWQEFVNSVSCIKILSPQEVQQM 871
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 249/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 324 TGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 381
Query: 373 RP 374
RP
Sbjct: 382 RP 383
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ + E D++LVGDDPW EF
Sbjct: 792 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDVLLVGDDPWQEFV 851
Query: 653 NMVKRIFICSSQDVKKM 669
+ V I I S Q+V++M
Sbjct: 852 STVSCIKILSPQEVQQM 868
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 65
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTASDTST 124
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 185 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 244
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 245 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 302
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 303 TGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 360
Query: 373 RP 374
RP
Sbjct: 361 RP 362
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 242/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F+V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFIVFFNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 584 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDM 640
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDV 776
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 TNSRFTIFYNPR--ASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 317 TGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 374
Query: 373 RP 374
RP
Sbjct: 375 RP 376
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 458 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 508
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFTLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 509 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 566
G+ + S + S +P SS + T G S + + F + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSPENTGQV 777
Query: 567 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 624
+P + + KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPPTT-----------TFVKVYKSG-SFGRSLDISKFSRYHQLRSELAHMFGLEGELEDP 825
Query: 625 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 82 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 TNSRFTIFYNPR--ASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 318
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 319 TGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 376
Query: 373 RP 374
RP
Sbjct: 377 RP 378
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 458 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 508
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 644 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 703
Query: 509 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 566
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 704 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 763
Query: 567 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 624
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 764 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 811
Query: 625 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 812 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 856
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 247/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W++S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 819
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 850
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 248/362 (68%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 TNSRFTIFYNPR--ASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 317 TGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 374
Query: 373 RP 374
RP
Sbjct: 375 RP 376
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 458 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 508
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 509 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 566
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 777
Query: 567 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 624
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 825
Query: 625 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 232/349 (66%), Gaps = 16/349 (4%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL + K+G V YFPQGH+EQ+ AS + IP + L +I CRVVN
Sbjct: 52 YLELWHACAGPLTSLLKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 110
Query: 79 IHLMAEQETDEVYAQITLLPEPSQN----------EPTTPDPCPADSP-RPKVHSFSKVL 127
+ L+A +E DEVY Q+TLLP+P E + SP + H F K L
Sbjct: 111 VQLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ + VL+
Sbjct: 231 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLS 290
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+ ++A++T++ F V+Y PR + F++ KY++++ N ++G R+KMRFE ++S ER
Sbjct: 291 SVANAISTKSKFHVFYSPR--ASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQER 348
Query: 308 RF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
R SGT++ D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 349 RCSSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDP 397
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 524 KVPVSSLTTEGHIISTISAAADS--------DGKSDIAKEFKEKKQEQVQVSPKESQSKQ 575
+V S L E + IS+AA+ GK + K F + ++ +K+
Sbjct: 604 EVGRSDLPNEHKLQDNISSAANMGVSNDNNVQGKVNACKLFGFSLSGETTAQNLQNSAKR 663
Query: 576 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYT 634
SC TKV QG VGRA+DL+ L GY+ L+ ELE +F ++G L K W I+YT
Sbjct: 664 SC-------TKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRILYT 716
Query: 635 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
D E D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIG 754
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/342 (53%), Positives = 239/342 (69%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTH
Sbjct: 81 HNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 NSCFTVFYNPR--ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 580 SNRSRTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 635
SN +RT V++ +VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 724 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 783
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 784 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 817
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 250/359 (69%), Gaps = 12/359 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 1 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 60
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 61 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 121 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 179
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 180 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 239
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M F
Sbjct: 240 MHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 297
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
E E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 298 ETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 356
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 760 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 819
Query: 653 NMVKRIFICSSQDVKKMSPG 672
N V I I S QDV++M G
Sbjct: 820 NSVWCIKILSPQDVQQMVRG 839
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 250/359 (69%), Gaps = 12/359 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M F
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
E E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 305 ETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 767 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 826
Query: 653 NMVKRIFICSSQDVKKMSPG 672
N V I I S QDV++M G
Sbjct: 827 NSVWCIKILSPQDVQQMVRG 846
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAST 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTIFYNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 472 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 531
A+S TP+P K DT +EQ +C L G NHA A + P L
Sbjct: 617 ANSVSLTPYPGK---DTAVEQ----------ENCSLDGQ---NHALFGANID--PGLLLP 658
Query: 532 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK--ESQSKQSCLTSNRSRTKVQM 589
T I T S AD A F+ +Q S + S ++ T+NR+ KV
Sbjct: 659 TTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTANRTFVKVYK 718
Query: 590 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDP 647
G +VGR+LD++ Y+ L +EL +MF I+G L R+ W++V+ D E D++L+GD P
Sbjct: 719 SG-SVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGP 777
Query: 648 WHEFCNMVKRIFICSSQDVKKM 669
W F N V I I S +DV K+
Sbjct: 778 WEAFVNNVWYIKILSPEDVLKL 799
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 250/359 (69%), Gaps = 12/359 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M F
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
E E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 305 ETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/359 (52%), Positives = 250/359 (69%), Gaps = 14/359 (3%)
Query: 8 LSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S+PS SD L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +I
Sbjct: 8 MSEPSLESDGEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQI 67
Query: 64 PLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
P + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP P A S +P
Sbjct: 68 PNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTN 127
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA+DLH EW+F+HIFR
Sbjct: 128 Y-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFR 186
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRF 299
MH+G+LA A+HA AT + F ++Y P R S+F+I L KY++AV + + +VGMR++M F
Sbjct: 247 MHIGLLAAAAHAAATNSRFTIFYNP----RPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 302
Query: 300 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
E E+S RR+ GT+ + D S W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 303 ETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 361
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 765 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 824
Query: 653 NMVKRIFICSSQDVKKMSPG 672
N V I I S QDV++M G
Sbjct: 825 NSVWCIKILSPQDVQQMVRG 844
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/361 (51%), Positives = 244/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P SP + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R RQQ+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNK-FAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WE+EP + P P + KR
Sbjct: 318 GISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL--TTFPMYPSPFQLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
NR+ KV G + GR+LD+T Y L +EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NRNFVKVYKSG-SFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDREN 819
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDDPWPEFVNSVWCIKILSPQEVQQM 850
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 240/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P QNE P S +P + F K LTASDTST
Sbjct: 80 HNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQP-TNYFCKTLTASDTST 138
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA A
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 TGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 763 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 821
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 822 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 852
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQPTNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 NSCFTVFYNPR--ASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 650
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 728 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 787
Query: 651 FCNMVKRIFICSSQDVKKM 669
F N V I I S +DV K+
Sbjct: 788 FVNNVWYIKILSPEDVLKL 806
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 248/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPRAC--PSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N++ KV G + GR+LD+T Y+ L EL MF ++G+L R+ W++V+ D E
Sbjct: 774 NKTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDREN 832
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S ++V++M
Sbjct: 833 DVLLLGDGPWPEFVNSVWCIKILSPEEVQQM 863
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 246/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/346 (52%), Positives = 233/346 (67%), Gaps = 6/346 (1%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D+L ELW ACAGPL +P V Y+PQGH+EQ+ A+ + +++ LP+ +LC+
Sbjct: 2 DELDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASKQ--FSNLPAHLLCK 59
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+ I L A+ TDEV+AQ+ L P+ P + + V SF K LTASDTSTH
Sbjct: 60 ISKIELQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTSTH 119
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A +CLP LD + + P QELVAKDLHG EW F+HI+RG PRRHLLTTGWS F
Sbjct: 120 GGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSVF 179
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRLVAGDT +FLRGENG+L VGVR ++Q S+ S+ ++HLGVLA ASHA
Sbjct: 180 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAATE 239
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F V Y PR T S+F+I +KYL+ N VG R+KM+FE ++S ERR+SGT+V
Sbjct: 240 RLRFSVIYNPR--TSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYSGTIVE 297
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
V D P W +S WRS+KV+WDE AS R +RVSPWEIEPFV +T
Sbjct: 298 VSDADPLKWPNSAWRSMKVEWDESAS-ERHERVSPWEIEPFVPIST 342
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 246/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTH
Sbjct: 80 HNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
SN++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 775 SNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 833
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 834 NDVLLLGDGPWPEFVNSVGYIKILSPQEVQQM 865
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 250/366 (68%), Gaps = 17/366 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+N IP + LP +++C++
Sbjct: 9 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 68
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTAS 130
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTAS
Sbjct: 69 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTAS 124
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTT
Sbjct: 125 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTT 184
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+
Sbjct: 185 GWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAA 244
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRF 309
HA AT + F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+
Sbjct: 245 HAAATNSRFTIFFNPRAC--PSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRY 302
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
GT+ G+ D P W +S W+S+KV WDE + R RVS WEIEP + P P
Sbjct: 303 MGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFS 360
Query: 369 AKNKRP 374
+ KRP
Sbjct: 361 LRLKRP 366
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 650
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 744 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 803
Query: 651 FCNMVKRIFICSSQDVKKMSP-GSKLP 676
F N V I I S +V++M G LP
Sbjct: 804 FVNSVWYIKILSPLEVQQMGKQGLDLP 830
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 247/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTH
Sbjct: 80 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F +++ PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 ISRFTIFFNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W++S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 765 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 823
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 824 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 854
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 250/366 (68%), Gaps = 17/366 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+N IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTAS 130
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTAS
Sbjct: 82 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+
Sbjct: 198 GWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAA 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRF 309
HA AT + F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+
Sbjct: 258 HAAATNSRFTIFFNPRAC--PSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESSIRRY 315
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
GT+ G+ D P W +S W+S+KV WDE + R RVS WEIEP + P P
Sbjct: 316 MGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFS 373
Query: 369 AKNKRP 374
+ KRP
Sbjct: 374 LRLKRP 379
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 650
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 757 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 816
Query: 651 FCNMVKRIFICSSQDVKKMSP-GSKLP 676
F N V I I S +V++M G LP
Sbjct: 817 FVNSVWYIKILSPLEVQQMGKQGLDLP 843
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 245/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E++ IP + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTH
Sbjct: 80 HNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D S W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
+N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 749 TNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 807
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 808 NDVLLLGDGPWPEFVNSVGCIKILSPQEVQQM 839
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/380 (47%), Positives = 242/380 (63%), Gaps = 17/380 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN-QELNQRIPLFRLPSKILCRV 76
+Y ELW ACAGPL +PK+G V YFPQGHME+ +S+ + +P F L +I CRV
Sbjct: 58 IYMELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRV 117
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKV-------HSFSK 125
++ L+A +E DEVY Q++LLP P E + D R V H F K
Sbjct: 118 DDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCK 177
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRR
Sbjct: 178 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 237
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+ K LV+GD +FLRGE G+L +G+R AR ++++P S+I SQ V
Sbjct: 238 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDV 297
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L+ + AV+T++ F V+Y PR + F++ KY++++ + VG R+KMRF+ +DSP
Sbjct: 298 LSAVASAVSTKSAFNVFYSPR--ASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSP 355
Query: 306 ERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 364
ERR+SG V G+ D P W +SKWR L V+WDE +RVSPWEI+ V + P L
Sbjct: 356 ERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSV--SLPPLS 413
Query: 365 QPVLAKNKRPRLSMEVPPLD 384
+ K+ R S + P+D
Sbjct: 414 IQSSPRLKKLRTSQQAQPVD 433
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
KE + S + RS TKV Q +GR DL+ L G+ L+ ELE + +I+ L K
Sbjct: 667 KEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDPKK 726
Query: 629 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W I+YTD + D+M+VG DPWHEFC +V +I I + ++V+KM+
Sbjct: 727 GWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMT 769
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/352 (50%), Positives = 230/352 (65%), Gaps = 22/352 (6%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS + IP + L +I CRVVN
Sbjct: 51 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 109
Query: 79 IHLMAEQETDEVYAQITLLPEP--------------SQNEPTTPDPCPADSPRPKVHSFS 124
+ L+A +E DEVY Q+TLLP+ E D P S H F
Sbjct: 110 VQLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKS---TPHMFC 166
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLH EW+F+HI+RGQPR
Sbjct: 167 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPR 226
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ +
Sbjct: 227 RHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPN 286
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VL++ ++A++T++ F V+Y PR + F++ KY++++ N ++G R+KMRFE ++S
Sbjct: 287 VLSSVANAISTKSKFHVFYSPR--ASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDES 344
Query: 305 PERR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
ERR SG ++G D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 345 QERRCCSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDP 396
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Query: 540 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 599
+S + GK + K F + ++ +K+SC TKV QG VGRA+D
Sbjct: 628 VSIDNNVQGKVNACKLFGFSLSGETTTQNLQNSAKRSC-------TKVHKQGSLVGRAID 680
Query: 600 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 658
L+ L GY+ L+ ELE +F ++G L K W+I+YTD E D+M+VGDDPWHEFC++V +I
Sbjct: 681 LSRLSGYNDLLSELERLFSMEGLLKDPDKGWKILYTDSENDIMVVGDDPWHEFCDVVSKI 740
Query: 659 FICSSQDVKKMS 670
I + ++V+KM+
Sbjct: 741 HIYTQEEVEKMT 752
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 240/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
NI + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFYNPR--ASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 581 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
N+++T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 714 NQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 773
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW F N V I I S +D++KM
Sbjct: 774 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 805
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 244/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 775 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 833
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 834 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 863
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 240/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTIFYNPR--ASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 537 ISTISAAADSD----GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 592
ST S AD G S Q+ ++ P Q L+ R+ KV G
Sbjct: 678 FSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVDPPTLS--RTFVKVYKLG- 734
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 650
+VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 735 SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEA 794
Query: 651 FCNMVKRIFICSSQDVKKM 669
F N V I I S +DV+KM
Sbjct: 795 FVNNVWYIKILSPEDVQKM 813
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 240/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFYNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 360
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 541 SAAADSDGKSDIAKE--FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGRA 597
+A+ADSD + E F+ Q S + QS N++RT V++ + +VGR+
Sbjct: 675 TASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRS 734
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 735 LDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNV 794
Query: 656 KRIFICSSQDVKKM----------SPGSKL 675
I I S +D+ KM SPG +L
Sbjct: 795 WYIKILSPEDIHKMGEQALESLGPSPGQRL 824
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 240/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 NSCFTIFYNPR--ASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 636
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 716 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 774
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 775 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 808
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFYNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 538 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 596
+T SA D+ F+ VQ S + QS N++RT V++ + +VGR
Sbjct: 670 TTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGR 729
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 654
+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N
Sbjct: 730 SLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 789
Query: 655 VKRIFICSSQDVKKM 669
V I I S +D+ KM
Sbjct: 790 VWYIKILSPEDIHKM 804
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 248/420 (59%), Gaps = 83/420 (19%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS
Sbjct: 199 RHLLQSGWS--------------------------------------------------- 207
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V +A VA + P ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 208 VFVSAKRLVAGDAFIFLRTSP------AEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 261
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 262 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 318
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 319 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 549 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 602
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 603 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 662
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 663 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 722
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 723 KIFIYTREEVERMNPGA 739
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 248/420 (59%), Gaps = 83/420 (19%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 21 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 80
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 81 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS
Sbjct: 201 RHLLQSGWS--------------------------------------------------- 209
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V +A VA + P ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 210 VFVSAKRLVAGDAFIFLRTSP------AEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 263
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 264 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 320
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 321 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 380
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 551 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 604
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 605 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 664
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 665 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 724
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 725 KIFIYTREEVERMNPGA 741
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 241/343 (70%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ +IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 NSCFTVFFNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 SISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 538 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 596
+T SA AD+ F+ +Q S + QS N++ V++ + +VGR
Sbjct: 669 TTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGR 728
Query: 597 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 654
+LD++ Y L +EL +MF I+G+ R+ W++V+ D E D++L+GDDPW F N
Sbjct: 729 SLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 788
Query: 655 VKRIFICSSQDVKKM 669
V I I S +D++KM
Sbjct: 789 VWYIKILSPEDIQKM 803
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 246/362 (67%), Gaps = 9/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTST
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 TNSRFTIFYNPR--ASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 318
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 319 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 376
Query: 373 RP 374
RP
Sbjct: 377 RP 378
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 14/104 (13%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 640
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 675
+L+GDDPW EF N V I I S +V++M +PG KL
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPGDKL 865
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 245/362 (67%), Gaps = 9/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 TNSRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 317
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 375
Query: 373 RP 374
RP
Sbjct: 376 RP 377
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 777 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 835
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GDDPW EF N V I I S +V++M
Sbjct: 836 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 865
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/382 (48%), Positives = 235/382 (61%), Gaps = 72/382 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS
Sbjct: 199 RHLLQSGWS--------------------------------------------------- 207
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V +A VA + P ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 208 VFVSAKRLVAGDAFIFLRTSP------AEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 261
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 262 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 318
Query: 364 VQPVLAKNKRPRLSMEVPPLDL 385
V P+ + KR R S+ P D+
Sbjct: 319 VNPLPVRFKRSRSSVNALPSDV 340
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 496 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 546
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 545 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 598
Query: 547 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 597
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 599 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 658
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 659 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 718
Query: 657 RIFICSSQDVKKMSPGS 673
+IFI + ++V++M+PG+
Sbjct: 719 KIFIYTREEVERMNPGA 735
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 242/343 (70%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 321
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 322 TSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPL 364
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 692
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 242/343 (70%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 65
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 124
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 185 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 244
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 245 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 302
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 303 TSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPL 345
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 750 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 808
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 692
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 809 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 848
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 182/344 (52%), Positives = 242/344 (70%), Gaps = 8/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 321
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 322 TSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLT 365
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 692
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/382 (48%), Positives = 235/382 (61%), Gaps = 72/382 (18%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS
Sbjct: 199 RHLLQSGWS--------------------------------------------------- 207
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V +A VA + P ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 208 VFVSAKRLVAGDAFIFLRTSP------AEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 261
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 262 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 318
Query: 364 VQPVLAKNKRPRLSMEVPPLDL 385
V P+ + KR R S+ P D+
Sbjct: 319 VNPLPVRFKRSRSSVNALPSDV 340
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 246/363 (67%), Gaps = 12/363 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P Q + PAD S + + F K LTASDTS
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQKDAF--LPADLGTSGKQPTNYFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 138 THGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 198 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 257
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 312
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 258 ATNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 315
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P +
Sbjct: 316 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRL 373
Query: 372 KRP 374
KRP
Sbjct: 374 KRP 376
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 650
+ GR+L++T Y L EL MF ++GQL R+ W+++Y D + D++L+GDDPW +
Sbjct: 791 SFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPD 850
Query: 651 FCNMVKRIFICSSQDVKKMS 670
F I I S Q++++M
Sbjct: 851 FVKNASCIKILSPQELQQMG 870
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/361 (50%), Positives = 246/361 (68%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTH
Sbjct: 65 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTH 124
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 125 GGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 184
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 185 VSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 244
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F +++ PR S+F+I L KY++AV + + +VGMR++M FE +S RR+ GT+
Sbjct: 245 ISRFTIFFNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGTIT 302
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W++S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 303 GISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 360
Query: 374 P 374
P
Sbjct: 361 P 361
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 750 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 808
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 809 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 839
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 5/344 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 8 LNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 67
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 68 HNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLTASDTSTH 127
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 128 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR + S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 248 NSCFTVFYNPRWAS-PSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYMGTIT 306
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
G D P W +S WRS+KV WDE + R RVS WEIEP +
Sbjct: 307 GTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTS 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 636
T +R+ KV G +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 693 TPSRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDR 751
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E D++L+GDDPW F N V I I S +DV KM
Sbjct: 752 ENDVLLLGDDPWELFVNNVWYIKILSPEDVLKM 784
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 173/372 (46%), Positives = 238/372 (63%), Gaps = 22/372 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRV 76
+Y+ELW ACAGPL +PK+G V YFPQGHME+ + A + +P F L +I CRV
Sbjct: 59 IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRV 118
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSK 125
++ L+A +E DEVY Q+TLLP P ++ T + + + H F K
Sbjct: 119 EDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCK 178
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDT+THGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRR
Sbjct: 179 TLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 238
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV+ K LV+GD +FLRGE G L +G+R AR ++ +P S+I SQ V
Sbjct: 239 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDV 298
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L++ + A++ ++ F V+Y PR + F++ KY++A+N++ VG R+KM+F+ +DSP
Sbjct: 299 LSSVATALSAKSTFHVFYSPR--ASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSP 356
Query: 306 ERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 364
ERR+SG V G+ D P W +SKWR L V+WDE +RVSPWEI+ V+
Sbjct: 357 ERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVS------- 409
Query: 365 QPVLAKNKRPRL 376
P L+ PRL
Sbjct: 410 LPPLSIQSSPRL 421
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
KE + S + RS TKV QG VGRA+DL+ L GYD L+ ELE +F+++ L K
Sbjct: 670 KEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNK 729
Query: 629 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W I+YTD E DMM+VGDDPWHEFC +V +I I + ++V+KM+
Sbjct: 730 GWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMT 772
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 248/420 (59%), Gaps = 83/420 (19%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR-IPLFRLPSKILC 74
D L+ ELWKACAGPL VP G++VYY PQGH+EQ+EASTNQ Q+ PL+ LP KI C
Sbjct: 19 DALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPC 78
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFS 124
+++NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF
Sbjct: 79 KLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLL +GWS
Sbjct: 199 RHLLQSGWS--------------------------------------------------- 207
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V +A VA + P ++F++S ++Y E++ +++GMR+KMRFEGE++
Sbjct: 208 VFVSAKRLVAGDAFIFLRTSP------AEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 261
Query: 305 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+RF+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P
Sbjct: 262 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCH 318
Query: 364 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 412
V P+ + KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 319 VNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 242/343 (70%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ +IP + LP +++C++
Sbjct: 23 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQL 82
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 83 HNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTH 142
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 143 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIF 202
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 203 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHASAT 262
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 263 NSCFTVFYNPR--ASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 320
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D + W++S WRS+KV WDE + R RVS WEIEP
Sbjct: 321 GISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 363
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 572 QSKQSCLTSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTK 628
Q+ + T N++ T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+
Sbjct: 711 QNAEQIDTQNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSG 770
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W++V+ D E D++L+GDDPW F N V I I S +D++KM
Sbjct: 771 WQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 812
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 185/362 (51%), Positives = 245/362 (67%), Gaps = 9/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 TNSRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 317
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLK 375
Query: 373 RP 374
RP
Sbjct: 376 RP 377
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 680 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 738
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GDDPW EF N V I I S +V++M
Sbjct: 739 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 768
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/392 (45%), Positives = 251/392 (64%), Gaps = 33/392 (8%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ------LEASTNQELNQRIPL 65
S +S + ELW ACAGPL+ +PK+G V YFPQGH+EQ L AS N
Sbjct: 19 SGSSSTVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQHLHDFPLPASAN--------- 69
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---- 120
+PS + CRV+++ L AE+ +DEV+ Q+ L+PE Q ++ AD
Sbjct: 70 --IPSHVFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVM 127
Query: 121 -----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF
Sbjct: 128 KSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRF 187
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S
Sbjct: 188 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSA 247
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
+S Q + L +A++ + F ++Y PR+ TS+FII ++++L++++ ++ GMR+
Sbjct: 248 LSGQQLSPTSLMDVVNALSARCAFSIHYNPRV--STSEFIIPIHRFLKSLDYSYSAGMRF 305
Query: 296 KMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
+MRFE ED+ ERRF+G +VG+ D P W SKWR L V+WD+ +TR +RVSPWEIEP
Sbjct: 306 RMRFETEDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDD-LEVTRHNRVSPWEIEP 364
Query: 355 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
+++T N + + A KR ++ + L+ P
Sbjct: 365 SGSASTANNL--MSAGLKRTKIGLPSAKLEFP 394
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 245/365 (67%), Gaps = 12/365 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQL-EASTNQELNQRIPLF-RLPSKILCR 75
L ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E + IP + LPS+++C
Sbjct: 8 LNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLVCL 67
Query: 76 VVNIHLMAEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL+P P+ + P R F K LTASDTST
Sbjct: 68 LDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTASDTST 127
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD Q+ P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 128 HGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWSV 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+GVLA A+HA A
Sbjct: 188 FVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAAA 247
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I + KY +A+ + + +VGMR++M FE E+S RR+ GT+
Sbjct: 248 TSSRFTIFYNPR--QSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMGTI 305
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAK 370
G+ D P W +S WRSLKV WDE + R RVS WEIEP TP L+ PV +
Sbjct: 306 TGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLLCPPPVAFR 362
Query: 371 NKRPR 375
KRPR
Sbjct: 363 TKRPR 367
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKV G +VGR++D+ Y L EL +F++ L RT W++V+ D+E D
Sbjct: 740 RTFTKVHKLG-SVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEND 798
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+LVGDDPW EF N V+ I I S ++++M
Sbjct: 799 TLLVGDDPWEEFVNYVRSIKILSPNEIQQM 828
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/381 (46%), Positives = 246/381 (64%), Gaps = 32/381 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH EQ + + + + +P+ + CRV+++
Sbjct: 49 ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAYNIPTHVFCRVLDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDPCPADSPRPKVHSFSKVL 127
L AE+ +DEVY Q+ L+PE Q E T + +P H F K L
Sbjct: 102 LHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTP----HMFCKTL 157
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 158 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHL 217
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +S + S Q + G L
Sbjct: 218 LTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTLM 277
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
++A++++ F Y PR+ +S+FII +NK++++++ ++VGMR++MRFE EDS ER
Sbjct: 278 DVANALSSRCAFSACYNPRV--SSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAER 335
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RF+G V+G+ D P W SKWR L V+WD+ R +RVSPWEIEPF SA+ NL+
Sbjct: 336 RFTGLVLGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPWEIEPF-GSASNNLMAA 393
Query: 367 VLAKNKRPRLSMEVPPLDLPS 387
L KR R+ M ++ P+
Sbjct: 394 GL---KRTRIGMTSTKMEFPA 411
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/342 (52%), Positives = 237/342 (69%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E++ RIP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRL+AGD+ +F+ E +L +G++ R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+FII L KYL+AV + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFS-PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 777 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 835
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 836 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 866
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 241/343 (70%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 24 LNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 83
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 84 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQP-TNYFCKTLTASDTST 142
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSV 202
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 203 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 262
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+FII L KY+++V + + +VGMR++M FE E+S RR+ GT+
Sbjct: 263 TNSRFTIFYNPR--ASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTI 320
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 321 TTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 363
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 769 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 828
Query: 653 NMVKRIFICSSQDVKKMSPGSKLPMFSIEG 682
N V I I S Q+V++M G + + S G
Sbjct: 829 NSVGCIKILSPQEVQRMVRGGEGLLSSAPG 858
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 244/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/364 (53%), Positives = 247/364 (67%), Gaps = 12/364 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH+EQ+ AST ++ + IP + LPSKI+C +
Sbjct: 6 LNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIICLL 65
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
N+ L A+ ETDEVYAQ+ LLP + S+ E + +P + F K LTASDTSTH
Sbjct: 66 DNVTLHADPETDEVYAQMILLPIQISEKEALLSPDLEVVNKQPTEY-FCKTLTASDTSTH 124
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFS+ R+ A + PPLD + P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS F
Sbjct: 125 GGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTTGWSVF 184
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRL AGD+ +F+R + G L +G+R RQQ+ MPSSV+SS SMH GVLA ASHA AT
Sbjct: 185 VSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAASHAAAT 244
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +A+ N +F VGMR++M FE E+S RR+ GT+
Sbjct: 245 SSRFKIFYNPR--QSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVGTIT 302
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKN 371
G+ D P W S WRSLKV WDE + R RVS WEIEP TP L+ P+ ++
Sbjct: 303 GLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPL---TTPFLLCPPPLALRS 359
Query: 372 KRPR 375
KRPR
Sbjct: 360 KRPR 363
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/394 (46%), Positives = 243/394 (61%), Gaps = 23/394 (5%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S P S S L ELW ACAGPL+ +PK+G V YFPQGH+EQL + + ++ L
Sbjct: 43 SAPVSGSVCL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQLP-------DLPLAVYDL 93
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-----CPADSPRPKV--- 120
PS I CRVV++ L AE DEVYAQ++L+P+ Q E C + V
Sbjct: 94 PSYIFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKST 153
Query: 121 --HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG+EW+F+HI
Sbjct: 154 TTHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHI 213
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ + + S
Sbjct: 214 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCS 273
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
Q ++ L HA++ +++F + Y PR +S+FII L+K+L++++ F+VGMR+KMR
Sbjct: 274 QQLNQSTLTDVVHAMSMRSLFNICYNPR--ASSSEFIIPLHKFLKSLDYSFSVGMRFKMR 331
Query: 299 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
FE ED+ ERR+ G + G+ D P W SKWR L V+WD+ R RVSPWEIEP +
Sbjct: 332 FETEDAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDD-METNRHSRVSPWEIEPSGS 390
Query: 358 SATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 391
++ N K R P +P A
Sbjct: 391 VSSCNSFMTPGLKRSRSGFPSSKPEFPVPDGIGA 424
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 271/439 (61%), Gaps = 32/439 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ +IP + LP +++C++
Sbjct: 63 LNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLICQL 122
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTST
Sbjct: 123 HNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNY-FCKTLTASDTST 181
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 182 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 241
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 242 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 301
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR + S+F+I L KY+++V + + +VGMR++M FE E+S RR+ GTV
Sbjct: 302 TNSRFTIFYNPR--SSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTV 359
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
+ D S W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 360 TAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT---------------- 403
Query: 373 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
+ + P P PW++ L H + V +D + + W + +S
Sbjct: 404 ----TFPMYPTAFPLRLKRPWASGLPSMHGMFN-GVKNDDFARYSSLMWLGNGDRGTQSS 458
Query: 433 NFMSRTQSDGEWLTSPRVK 451
NF S WL PR++
Sbjct: 459 NFQGLGVS--PWL-QPRIE 474
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 813 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 872
Query: 653 NMVKRIFICSSQDVKKM 669
N V I I S QDV +M
Sbjct: 873 NSVWCIKILSPQDVHQM 889
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/367 (51%), Positives = 240/367 (65%), Gaps = 17/367 (4%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRVVNIH 80
LW ACAGPL +PK+G V YFPQGH+EQ L AS E +IP LP ++ CRV+N++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------HSFSKVLTASDT 132
L AE ETDEVYAQ+TL+PEP + P + H F K LTASDT
Sbjct: 83 LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKTLTASDT 142
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 143 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGW 202
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLATAS 250
S FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL+ A+
Sbjct: 203 SLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSAAA 262
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ ERR S
Sbjct: 263 NAISSKSMFHIFYNPR--ASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCS 320
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P L
Sbjct: 321 GVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP--PALNVPRL- 377
Query: 370 KNKRPRL 376
K RP L
Sbjct: 378 KKLRPSL 384
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 628 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 687
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 688 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 721
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 246/362 (67%), Gaps = 9/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTST
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQPTNYFCKTLTASDTST 140
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S R+ GT+
Sbjct: 261 TNSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYMGTI 318
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + +
Sbjct: 319 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLR 376
Query: 373 RP 374
RP
Sbjct: 377 RP 378
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 640
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
+L+GDDPW EF N V I I S +V++M G
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKG 853
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 244/351 (69%), Gaps = 9/351 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP
Sbjct: 17 PEGDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLP 76
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKV 126
+++C++ N+ + A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K
Sbjct: 77 PQLICQLHNVTMHADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKT 135
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RH
Sbjct: 136 LTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRH 195
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+L
Sbjct: 196 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLL 255
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSP 305
A A+HA AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S
Sbjct: 256 AAAAHAAATNSRFTIFYNPR--ASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESS 313
Query: 306 ERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 314 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 364
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 772 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 830
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-----SPGSKLP 676
D++L+GDDPW EF N V I I S +V++M SP + +P
Sbjct: 831 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASVP 874
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 NSCFTVFFHPR--ASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 579 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 635
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 636 DEGDMMLVGDDPW 648
E D++L+GDDPW
Sbjct: 760 KENDILLLGDDPW 772
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/371 (51%), Positives = 241/371 (64%), Gaps = 25/371 (6%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRVVNIH 80
LW ACAGPL +PK+G V YFPQGH+EQ L AS E +IP LP ++ CRV+N++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82
Query: 81 LMAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLT 128
L AE ETDEVYAQ+TL+PEP E + +P H F K LT
Sbjct: 83 LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP----HMFCKTLT 138
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLL 198
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVL 246
TTGWS FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL
Sbjct: 199 TTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVL 258
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
+ A++A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ E
Sbjct: 259 SAAANAISSKSMFHIFYNPR--ASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAE 316
Query: 307 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
RR SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L
Sbjct: 317 RRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP--PALNV 374
Query: 366 PVLAKNKRPRL 376
P L K RP L
Sbjct: 375 PRL-KKLRPSL 384
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/373 (48%), Positives = 234/373 (62%), Gaps = 26/373 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ A + IP L +I CRV
Sbjct: 50 IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKLDLSPQIFCRVA 108
Query: 78 NIHLMAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHS 122
N+HL+A +ETDEVY Q+TLLP E +E +P H
Sbjct: 109 NVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTP----HM 164
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQ
Sbjct: 165 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 224
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+ K LV+GD +FLR ENGEL +G+R AR ++ +P S+I S
Sbjct: 225 PRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSS 284
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
+L+ ++AV+ ++MF V+Y PR S+F+I KY+ ++ N +G R++MRFE +
Sbjct: 285 -SILSLVANAVSNKSMFHVFYSPR--ATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMD 341
Query: 303 DSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
DSPERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P
Sbjct: 342 DSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDP--SGSLP 399
Query: 362 NLVQPVLAKNKRP 374
L + KRP
Sbjct: 400 PLSIQSSPRPKRP 412
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 566 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 625
S ++S SK+ C TKV QG VGRA+DL+ L GY+ L+ ELE +F+++G L
Sbjct: 628 ASNQQSSSKRIC-------TKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRD 680
Query: 626 RTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
K W I+YTD E DMM+VGDDPWH+FC++V +I + + ++V+
Sbjct: 681 PEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 245/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 262 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 319
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 320 GICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 377
Query: 374 P 374
P
Sbjct: 378 P 378
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 572 QSKQSCLTSN-RSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRT 627
QS ++ T N +S T V++ + + GR+LD++ Y L EL MF ++GQL R+
Sbjct: 739 QSSENLGTENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRS 798
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
W++V+ D E D++L+GDDPW EF + V I I S Q+V++M
Sbjct: 799 GWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 840
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 NSCFTVFFHPR--ASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 579 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 635
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E D++L+GDDPW F N V I I S +DV +M
Sbjct: 760 KENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 239/344 (69%), Gaps = 8/344 (2%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
+L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP +++C+
Sbjct: 29 NLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQ 88
Query: 76 VVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ ++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTS
Sbjct: 89 LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTS 147
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 148 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 207
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 208 VFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAA 267
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 312
+T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 268 STNSRFTIFYNPRAC--PSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 325
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 ITEVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 730 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 788
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 789 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 829
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 245/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 318 GICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 797 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 855
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
+GDDPW EF + V I I S Q+V++M
Sbjct: 856 LGDDPWPEFVSSVWCIKILSPQEVQQM 882
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSI 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 720 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 778
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 779 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 819
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 245/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTH
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 262 NSRFTIFYNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 319
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 320 GICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 377
Query: 374 P 374
P
Sbjct: 378 P 378
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 799 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 857
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
+GDDPW EF + V I I S Q+V++M
Sbjct: 858 LGDDPWPEFVSSVWCIKILSPQEVQQM 884
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 266 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 718 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 776
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 777 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 817
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 325 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 814
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 325 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 NSCFTVFFHPR--ASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 579 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 635
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 636 DEGDMMLVGDDPWHEF 651
E D++L+GDDPW +
Sbjct: 760 KENDILLLGDDPWEYY 775
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 243/354 (68%), Gaps = 6/354 (1%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G + Q L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP
Sbjct: 7 GLVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPN 66
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSF 123
+ LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T P P + + F
Sbjct: 67 YPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYF 126
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQP 186
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHI 246
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
G+LA A+HA AT + F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPR--ASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETE 304
Query: 303 DSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+S RR+ GT+ G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 305 ESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 580 SNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 636
SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 734 SNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 793
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
E D++L+GDDPW F + V I I S +DV++M
Sbjct: 794 ENDILLLGDDPWESFVSNVWYIKILSPEDVQEM 826
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 19 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 78
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTH
Sbjct: 79 HNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTH 138
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 198
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASAT 258
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 259 NSCFTVFFHPR--ASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 636
T ++ KV G +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 696 TQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 754
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
E D++L+GDDPW F N V I I S +DV++M
Sbjct: 755 ENDILLLGDDPWESFVNNVWYIKILSPEDVQQMG 788
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 245/362 (67%), Gaps = 10/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ +IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
N+ + A+ ETDEVYAQ+TL P Q +P P + +P + F K LTASDTST
Sbjct: 88 HNVTMNADPETDEVYAQMTLQPLNPQELKDPYLPAELGTANKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR +F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 267 TNSRFTIFYNPR--ASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 314 VGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D + W +S WRS+KV WDE + R RVS WEIEP + P P + K
Sbjct: 325 TGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPTPFPLRLK 382
Query: 373 RP 374
RP
Sbjct: 383 RP 384
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 787 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 846
Query: 653 NMVKRIFICSSQDVKKM 669
N V I I S Q+V++M
Sbjct: 847 NSVFCIKILSPQEVQQM 863
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 245/391 (62%), Gaps = 13/391 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L + + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T+++F +YY PR+ S+FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G +
Sbjct: 274 TESVFNIYYNPRL--SQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGIIT 331
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P
Sbjct: 332 GSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKP 390
Query: 375 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
L P +P P A AQ H + Q
Sbjct: 391 CLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 242/344 (70%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E++ IP + LP++++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P E ++ P S +P + F K LTASDTS
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNY-FCKTLTASDTS 123
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 THGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 183
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 184 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 243
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 312
AT + F ++Y PR T S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 244 ATNSRFTIFYNPR--TSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 301
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 302 ITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 5 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 65 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 184 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 243
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 244 TNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 301
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 302 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 344
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 694 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 752
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 753 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 793
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 236/339 (69%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ STN+ +IP + L S++LC+V N+
Sbjct: 44 ELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQLLCQVHNV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 104 TLHADKETDEIYAQMSLQPVNSEKDVF---PIPDFGLKPNKHPTEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 GAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L K+ ++V N + +VGMR+ M FE E+S +RR+ GT+ G
Sbjct: 281 STFTIFYNPRAC--PSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYMGTISG 338
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR L+V+WDEP + +RVSPWE+E
Sbjct: 339 ISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TR-TKWEIVYTDDEGD 639
R+ TK+Q G +VGR++D++ Y+ L E+E MF ++G L+ TR + W++VY D E D
Sbjct: 817 RTYTKIQKTG-SVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVDFEND 875
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW EF V+ I I S +V++M
Sbjct: 876 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 905
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/342 (52%), Positives = 240/342 (70%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L EL ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 20 LNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFFNPR--ASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 318 GIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 635
L + R+ KV G +VGR+LD+T Y L EL +MF I+G L R+ W++V+ D
Sbjct: 713 LNATRTFVKVYKSG-SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVD 771
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
E D++L+GDDPW F N V I I S +DV K+
Sbjct: 772 RENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKLG 806
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/345 (51%), Positives = 239/345 (69%), Gaps = 12/345 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 17 LNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 76
Query: 77 VNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 132
N+ L A+ ETDEVYAQ+TL P EP ++ P+ P + F K LTASDT
Sbjct: 77 HNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQP---TNYFCKTLTASDT 133
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+ R+ A + P LD Q P QEL+A+DLH EW+F+HI+RGQP+RHLLTTGW
Sbjct: 134 STHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTTGW 193
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+R + G+L +G+R R Q MPSSV+SS SMH+GVLA A+HA
Sbjct: 194 SVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAAHA 253
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 311
+T F ++Y PR S+F++ L K+ +AV + + ++GMR++M FE E+S RR+ G
Sbjct: 254 ASTNCRFTIFYNPR--ASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMG 311
Query: 312 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
T+ G+ D P+ W++S+WRS+KV WDE + R RVS WEIEP
Sbjct: 312 TITGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPL 356
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKV G +VGR+LD+T GY L EL+ MF ++GQL R+ W++V+ D E D
Sbjct: 792 RTFTKVYKLG-SVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVDKEKD 850
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N V+ I I S +V +MS
Sbjct: 851 VLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 194/396 (48%), Positives = 246/396 (62%), Gaps = 40/396 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E IP + LPS+++C + N+
Sbjct: 77 ELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDNV 136
Query: 80 HL---------------MAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSF 123
L A+ ETDEVYAQ+TL+P P NE P R F
Sbjct: 137 TLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRSRQPTDYF 196
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFS+ R+ A + PPLD +Q+ P QEL A+DLH EW F+HI+RGQP
Sbjct: 197 CKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRGQP 256
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
RRHLLTTGWS FV++KRL AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+
Sbjct: 257 RRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHI 316
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGE 302
GVLA A+HA AT + F ++Y PR S+F+I + KY +A+ N + +VGMR++M FE E
Sbjct: 317 GVLAAANHAAATSSRFTIFYNPR--QSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETE 374
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+S RR+ GT+ G+ D P W +S WRSLKV WDE + R RVS WEIEP TP
Sbjct: 375 ESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TP 431
Query: 362 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 397
L+ P PPL A PW R+
Sbjct: 432 FLLCP--------------PPLTF--RAKRPWGGRV 451
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
++R+ TKV G +VGR++D+ Y L EL +F+++G L R+ W++V+ D+E
Sbjct: 809 TSRTFTKVHKLG-SVGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLVFVDNE 867
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D +LVGDDPW EF N V+ I I S ++ +MS
Sbjct: 868 NDTLLVGDDPWEEFVNCVRSIKILSPNEILQMS 900
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 238/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR ++F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 265 TNSRFTIFYNPR--ASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 322
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 323 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 775 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 811
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 239/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+P P S +P + F K LTASDTST
Sbjct: 81 HDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F +++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 TNSRFTIFFNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 317
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 318 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 360
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 708 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 766
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 767 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 803
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 238/343 (69%), Gaps = 8/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR ++F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 265 TNSRFTIFYNPR--ASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 322
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 323 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 638 GDMMLVGDDPW 648
D++L+GDDPW
Sbjct: 775 NDVLLLGDDPW 785
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 240/399 (60%), Gaps = 26/399 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V YFPQGH+EQL + CRVV++
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVP------PHVFCRVVDVS 121
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------------HSFSKV 126
L A+ TDEVYAQ++LLPE NE H F K
Sbjct: 122 LHADASTDEVYAQLSLLPE---NEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCKT 178
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 179 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRRH 238
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + SQ +LG L
Sbjct: 239 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNLGTL 298
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
A +HAVAT+ MF +YY PR+ S+FI+ K+ ++++ F+VG+R+KMR+E ED+ E
Sbjct: 299 ANVAHAVATKGMFRIYYNPRL--SQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAE 356
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RR++G + G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++ +L P
Sbjct: 357 RRYTGIITGTGDADPMWRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHLATP 416
Query: 367 VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
+K +P LS P +P P AQ + Q
Sbjct: 417 A-SKRLKPCLSHVNPEYMVPHGGGRPDFVESAQFRKVLQ 454
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/377 (47%), Positives = 239/377 (63%), Gaps = 34/377 (9%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ +A + IP F L +I+CRVV
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 78 NIHLMAEQETDEVYAQITLLP-------------------EPSQNEPTTPDPCPADSPRP 118
N+ L+A ++TDEVY Q+TLLP E +N ++ P
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTP------ 174
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI
Sbjct: 175 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHI 232
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
+RGQPRRHLLTTGWS FV+ K LV+GD +FLR E GEL +G+R AR ++ +P S+I
Sbjct: 233 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEK 292
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
S +L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ + +G R++MR
Sbjct: 293 NSCS-NILSLVANAVSTKSMFHVFYSPR--ATHAEFVIPYEKYITSIRSPVCIGTRFRMR 349
Query: 299 FEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
FE +DSPERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P V
Sbjct: 350 FEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSV- 408
Query: 358 SATPNLVQPVLAKNKRP 374
+ P+L + KRP
Sbjct: 409 -SLPHLSIQSSPRPKRP 424
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 568 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 627
P E+ + + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 651 PVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE 710
Query: 628 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 711 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 249/398 (62%), Gaps = 19/398 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L + LP + CRVV++
Sbjct: 56 ELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPAALPPHVFCRVVDVT 115
Query: 81 LMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 116 LHADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPHMFCKTL 175
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 176 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 235
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA
Sbjct: 236 LTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLA 295
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+HAVAT+++F +YY PR+ S+FII +K++++ + +F+ G+R+KMR+E +D+ ER
Sbjct: 296 NVAHAVATKSVFHIYYNPRL--SQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDASER 353
Query: 308 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
R +G + G+ D P W+ SKW+ L V+WD+ RP+R+SPWEIE + + +L P
Sbjct: 354 RCTGVIAGIGDADPMWRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHLSAPN 413
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
AK +P L P +P+ + P A AQ H + Q
Sbjct: 414 -AKRLKPCLP---PDYLVPNGSGCPDFAESAQFHKVLQ 447
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/373 (47%), Positives = 236/373 (63%), Gaps = 26/373 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW ACAGPL +PK+G V YFPQGH+EQ +A + IP F L +I CRVV
Sbjct: 57 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIFCRVV 115
Query: 78 NIHLMAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHS 122
++ L+A +ETDEVY Q+TLLP E +E +P H
Sbjct: 116 HVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTP----HM 171
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQ
Sbjct: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 231
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
PRRHLLTTGWS FV+ K L +GD +FLR E GEL +G+R AR ++ +P S+I S
Sbjct: 232 PRRHLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS 291
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
+L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ N +G R++MRFE +
Sbjct: 292 -NILSLLANAVSTKSMFHVFYSPR--ATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMD 348
Query: 303 DSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
DSPERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P
Sbjct: 349 DSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSI--SLP 406
Query: 362 NLVQPVLAKNKRP 374
+L + KRP
Sbjct: 407 HLSIQSSPRPKRP 419
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 568 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 627
P E+ + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 654 PVETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDPE 713
Query: 628 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 714 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 761
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 240/343 (69%), Gaps = 7/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-QPRRHLLTTGWST 194
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG QP+RHLLTTGWS
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLTTGWSV 200
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 201 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 TNSCFTIFYNPR--ASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 318
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 361
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 245/391 (62%), Gaps = 13/391 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L +P + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T+++F +YY PR+ S+FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G +
Sbjct: 274 TESVFNIYYNPRL--SQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIIT 331
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P
Sbjct: 332 GSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKP 390
Query: 375 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
L P +P P A AQ H + Q
Sbjct: 391 CLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 236/337 (70%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 173
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 174 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 233
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 234 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 294 FLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGIS 351
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 352 DLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/383 (45%), Positives = 244/383 (63%), Gaps = 33/383 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQ------LEASTNQELNQRIPLFRLPSKILC 74
ELW ACAGP++ +PK+G V YFPQGH+EQ L AS N +PS + C
Sbjct: 33 ELWHACAGPMISLPKKGSVVVYFPQGHLEQHLHDFPLPASAN-----------IPSHVFC 81
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---------HSFS 124
RV+++ L AE+ +DEVY Q+ L+PE Q + AD H F
Sbjct: 82 RVLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTPHMFC 141
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPR
Sbjct: 142 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPR 201
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S Q
Sbjct: 202 RHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSPT 261
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
L +A++ + F ++Y PR+ +S+FII +++++++++ ++ GMR++MRFE ED+
Sbjct: 262 SLMDVVNALSARCAFSIHYNPRV--SSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDA 319
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
ERRF+G +VG+ D P W S+WR L V+WD+ TR +RVSPWEIEP +++T N
Sbjct: 320 AERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDD-LEATRHNRVSPWEIEPSGSASTANN 378
Query: 364 VQPVLAKNKRPRLSMEVPPLDLP 386
+ + A KR ++ + LD P
Sbjct: 379 L--MSAGLKRTKIGLPSAKLDFP 399
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 236/337 (70%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 173
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 174 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 233
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 234 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 294 FLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGIS 351
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 352 DLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 639
R+ KVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYIKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 236/337 (70%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 42 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 101
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 102 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 161
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 162 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 221
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 222 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 281
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 282 FLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGIS 339
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 340 DLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 781 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 839
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 840 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 876
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 244/391 (62%), Gaps = 13/391 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L + + CRVV++
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFCRVVDVT 93
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTST 134
L+A+ TDEVYAQ++L+PE + D D K H F K LTASDTST
Sbjct: 94 LLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTST 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 154 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSA 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVA
Sbjct: 214 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVA 273
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
T+++F +YY PR+ S+FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G +
Sbjct: 274 TESVFNIYYNPRL--SQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIIT 331
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P
Sbjct: 332 GSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKP 390
Query: 375 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
L P +P P A AQ H + Q
Sbjct: 391 CLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 235/337 (69%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 51 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 110
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 111 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLRGSKHPTEFFCKTLTASDTSTHGGF 170
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 171 SVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 230
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 231 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 290
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 291 FLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGIS 348
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 349 DLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L + W++VY D E D
Sbjct: 792 RTYTKVQKTG-SVGRSIDVTSFRDYEELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 850
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 851 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 881
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 236/337 (70%), Gaps = 6/337 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 43 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 102
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGF
Sbjct: 103 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGF 162
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 163 SVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 222
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 223 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 282
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+
Sbjct: 283 FLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGIS 340
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 341 DLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 782 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 840
Query: 640 MMLVGDDPW 648
++LVGDDPW
Sbjct: 841 VLLVGDDPW 849
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 238/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + T P + + F K LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQPSNYFCKTLTASDTSTH 140
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLLTTGWSIF 200
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 261 NSCFTVFYNPR--ASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 318
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 319 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 361
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 581 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 637
N+S+T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 712 NQSQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 771
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW F N V I I S +D++KM
Sbjct: 772 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 803
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 169/344 (49%), Positives = 225/344 (65%), Gaps = 21/344 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 46 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 98
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTAS 130
L AE TDEVYAQ++L+PE + AD + H F K LTAS
Sbjct: 99 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 158
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 159 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 218
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 219 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 278
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++
Sbjct: 279 NAISTRSVFNICYNPR--ASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYT 336
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
G + G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 337 GLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 379
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/343 (51%), Positives = 238/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+R E +L +G+R +R Q+ +PSS++SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR + +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFYHPR--SSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R R S WEIEP
Sbjct: 318 GIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
++ KV G +VGR+LD++ Y L +EL +MFDIKG L R+ W++V+ D E D
Sbjct: 694 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDD 752
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GDDPW F N V I I S +DV+KM
Sbjct: 753 VLLLGDDPWESFVNSVWYIKILSPEDVQKM 782
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 236/361 (65%), Gaps = 11/361 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E + IP + L ++C + NI
Sbjct: 4 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTLDNI 63
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+ L+P ++ T P + F K LTASDTSTHGGFS
Sbjct: 64 TLHADLETDEVYAQMVLIPSQDPDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTHGGFS 123
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTS 198
+ R+ A + P LD NQ P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS FV++
Sbjct: 124 IPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSVFVSA 183
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T +
Sbjct: 184 KRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQTSSR 243
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR S+F+I L KY +AV + + VGMR++M FE E+S RR+ GTV G+
Sbjct: 244 FTIFYNPR--QSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTGIG 301
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRP 374
D P W +S WRSLKV WDE + R RVS WEIEP TP L P+ +++KR
Sbjct: 302 DLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLSCPPPLASRSKRA 358
Query: 375 R 375
R
Sbjct: 359 R 359
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 250/383 (65%), Gaps = 21/383 (5%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH Q+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTASD
Sbjct: 81 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKLPTNYFCKTLTASD 137
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD +Q P QEL+AKDLHG EW+ +HIFRGQP+RHLLTTG
Sbjct: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLLTTG 197
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV++KRLVAGD +F+ EN +L +G+R R Q+ MP SV+SS SMH+G+LA A+H
Sbjct: 198 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAAAAH 257
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFS 310
A AT T F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+
Sbjct: 258 ATATNTRFTIFYNPR--ASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYM 315
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GT+ G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P
Sbjct: 316 GTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSL 373
Query: 370 KNKRPRLSMEVPPLDLPSAASAP 392
+ KRP P LPS P
Sbjct: 374 RLKRPW------PSGLPSLPGFP 390
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 209/293 (71%), Gaps = 2/293 (0%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P DDL RE+WKAC+G L+DV K G+RVYYFP+ H+EQLE S+NQEL +++ L LP
Sbjct: 17 PFKGDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPP 76
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILCRV++I L+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT S
Sbjct: 77 KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQS 136
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
D ++ G SV K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT
Sbjct: 137 DIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTN 196
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA AS
Sbjct: 197 GWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVAS 255
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
HA AT+++F VY KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 256 HAFATKSLFFVYQKP-CYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 242/344 (70%), Gaps = 9/344 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 64
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTS 133
N+ + A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K LTASDTS
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTS 123
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 THGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 183
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 184 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAA 243
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 312
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT
Sbjct: 244 ATNSRFTIFYNPR--ASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 301
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
+ G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 302 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 247/398 (62%), Gaps = 17/398 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L P LP + CRVV++
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 81 LMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+HAVAT+++F +YY PR+ S+FII +K++++ + F+ G R+K+++E +D+ ER
Sbjct: 291 NVAHAVATKSVFHIYYNPRL--SQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASER 348
Query: 308 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
R +G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + +
Sbjct: 349 RCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAP 407
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
AK +P L P +P+ + P A AQ H + Q
Sbjct: 408 NAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 247/398 (62%), Gaps = 17/398 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L P LP + CRVV++
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 81 LMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSPRPKV----HSFSKVL 127
L A+ TDEVYAQ+ L+ E + + D ++ + + H F K L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+HAVAT+++F +YY PR+ S+FII +K++++ + F+ G R+K+++E +D+ ER
Sbjct: 291 NVAHAVATKSVFHIYYNPRL--SQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASER 348
Query: 308 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
R +G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + +
Sbjct: 349 RCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAP 407
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
AK +P L P +P+ + P A AQ H + Q
Sbjct: 408 NAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 262/400 (65%), Gaps = 18/400 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD-VFPIPSLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR T S F+I L +Y +A + +VGMR+ M FE E+S +RR +GT+VG+
Sbjct: 278 SFTIYYNPR--TSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIKRRCTGTIVGIS 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPR 375
D+ P W +SKWR+L+V+WDE RP+RVS W+IE TP N+V P +KR
Sbjct: 336 DYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE------TPENMVFPSPLNSKRQC 389
Query: 376 L-SMEVPPLDLPSA--ASAPWSARLAQSHNLTQLSVTAED 412
L S VP L + S +S P A+ + NL Q+ + D
Sbjct: 390 LPSYAVPGLQIGSVNMSSIP-RAQGSPFGNLQQMPGSGSD 428
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 843 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGGSDWKLVYVDYEND 901
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 902 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 932
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/378 (49%), Positives = 252/378 (66%), Gaps = 19/378 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++ +
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGS 277
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR T S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+
Sbjct: 278 SFTIYYNPR--TSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGIS 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR- 373
D+ P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 336 DYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKR 389
Query: 374 ---PRLSMEVPPLDLPSA 388
P + VP +++ SA
Sbjct: 390 QCLPGYGVSVPGMEIGSA 407
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 941
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/343 (51%), Positives = 237/343 (69%), Gaps = 6/343 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQPSNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+R E +L +G+R R Q+ +PSS++SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR + +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSCFTVFYHPR--SSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 317
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S W +S WRS+KV WDE + R R S WEIEP
Sbjct: 318 GIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLT 360
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMML 642
KV G +VGR+LD++ Y+ L +EL MFDIKG L R+ W++V+ D E D++L
Sbjct: 679 VKVYKSG-SVGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILL 737
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM---SPGSKLP 676
+GDDPW F N V I I S DV KM GS P
Sbjct: 738 LGDDPWESFVNSVWYIKILSPDDVHKMGEHGEGSSFP 774
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/338 (51%), Positives = 235/338 (69%), Gaps = 8/338 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 52 ELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 111
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L A++++DE+YAQ++L P S+ + P S P F K LTASDTSTHGG
Sbjct: 112 TLHADKDSDEIYAQMSLQPVHSERDVFPVPEFGLLRGSKHPS-EFFCKTLTASDTSTHGG 170
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 171 FSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVG 230
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 231 SKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRT 290
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F+++Y PR ++F+I + KY +A+ ++ +V MR+ M FE EDS +RR+ GT+VG+
Sbjct: 291 PFLIFYNPRAC--PAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRYMGTIVGI 348
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 349 SDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR---TKWEIVYTDDEG 638
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L TR + W++VY D E
Sbjct: 758 RTYTKVQKTG-SVGRSIDVTSFRDYKELKSAIECMFGLEGLL-TRPQSSGWKLVYVDYES 815
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D++LVGDDPW EF VK I I S +V++MS
Sbjct: 816 DVLLVGDDPWEEFVGCVKCIRILSPTEVQQMS 847
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 236/340 (69%), Gaps = 11/340 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTSTH 135
L A++++DE+YAQ++L P S+ + P P S P F K LTASDTSTH
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERD-VFPVPDFGMLRGGSKHP-TEFFCKTLTASDTSTH 171
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 172 GGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLF 231
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A
Sbjct: 232 VGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATAN 291
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+T F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+V
Sbjct: 292 RTPFLIFYNPRAC--PAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 349
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
G+ D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 350 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L + W++VY D E D
Sbjct: 794 RTYTKVQKTG-SVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 852
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 853 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 883
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 226/345 (65%), Gaps = 22/345 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPK----------VHSFSKVLTA 129
L AE TDEVYAQ++L+PE Q + AD + H F K LTA
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTA 161
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLT
Sbjct: 162 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLT 221
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 222 TGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAV 281
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR+
Sbjct: 282 VNAISTRSVFNICYNPR--ASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRY 339
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+G + G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 340 TGLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 383
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/369 (47%), Positives = 238/369 (64%), Gaps = 24/369 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
E+W+ACAG L+ +P++G V YF QGH+EQ AS + + LP ++ CRV+N++
Sbjct: 29 EVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDG--------WGLPPQVFCRVINVN 80
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---------SPRPKVHSFSKVLTASD 131
L A+Q +DEVYAQ++L P P E P+ + S H F K LTASD
Sbjct: 81 LHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSATPHMFCKTLTASD 140
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EW+F+HI+RGQPRRHLLTTG
Sbjct: 141 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTG 200
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATAS 250
WS FV K+LVAGD +FLRGE+GEL +G+R R + S+PS + SQ++ A S
Sbjct: 201 WSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLSGSTFAAVS 260
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
AV+T+++F V Y PR ++FI+ KY + N +F++GMR+KM+ E ED+ ERR +
Sbjct: 261 KAVSTKSVFHVSYNPR--ASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTAERRCT 318
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + GV D P W SKWR L V+WDE + R DRVSPWEI+ + + P + P
Sbjct: 319 GLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEID--LLGSVP-VFSPPAT 375
Query: 370 KNKRPRLSM 378
KRPR+S+
Sbjct: 376 GLKRPRISL 384
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
Query: 478 TPHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE- 533
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 606 APDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDP 656
Query: 534 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQG 591
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 657 AHV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQG 711
Query: 592 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHE 650
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW E
Sbjct: 712 SMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQE 771
Query: 651 FCNMVKRIFICSSQDVKKMSP 671
FCN+V +I I + +V+KM P
Sbjct: 772 FCNIVSKILIYTHDEVEKMIP 792
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 247/409 (60%), Gaps = 16/409 (3%)
Query: 8 LSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR 67
++ P S + ELW ACAGP+ +P++G V Y PQGH++ L P
Sbjct: 55 VATPPSRPSAVCLELWHACAGPVAPMPRKGSVVVYLPQGHLDHL--GDAPAHAAASPAAA 112
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV-- 120
+P + CRVV++ L A+ TDEVYAQ++LLPE + E T D K
Sbjct: 113 VPPHVFCRVVDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRF 172
Query: 121 ----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFS R+ A +C P LD NQ P+QELVAKDLHG EW+F+
Sbjct: 173 ARMPHMFCKTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFR 232
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 233 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPAL 292
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
SQ +LG LA +HAV+T++MF ++Y PR+ S+FI+ K+ ++++ F+VG R+K
Sbjct: 293 YSQCSNLGTLANVTHAVSTKSMFQIFYNPRL--SQSEFIVPYWKFTKSISQPFSVGWRFK 350
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
MR+E ED+ ERR++G + G D P W+ SKW+ L V+WD+ RP+R+SPWEIE
Sbjct: 351 MRYESEDAAERRYTGIITGTVDADPRWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTS 410
Query: 357 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
A++ +L P +K +P L P +P P A AQ + Q
Sbjct: 411 AASGSHLAAPT-SKRMKPYLPHANPEYTVPYGGGRPDFAESAQLRKVLQ 458
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/370 (50%), Positives = 247/370 (66%), Gaps = 9/370 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ +P + LP +++C++
Sbjct: 10 LNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQLICQL 69
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTH 135
++ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 70 HDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKTLTASDTSTH 129
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD +Q P+QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 130 GGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 189
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLV GD+ +F+ E +L +G+R AR Q+ MP SV+SS SMH+G+LA A+HA AT
Sbjct: 190 VSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAAAAHAAAT 249
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+ISL KY++AV + +VGMR++M FE E+S RR+ GT+
Sbjct: 250 NSRFTVFYNPR--ASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRYMGTIT 307
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
+ D P W +S WRS+KV WDE + R RVS WEIEP + P+ + KR
Sbjct: 308 SISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFPL--RLKR 365
Query: 374 PRLSMEVPPL 383
P L E+ PL
Sbjct: 366 PWLP-EMSPL 374
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G VGR+LD+ Y+ L DEL +MF ++G L R+ W++V D E D++L
Sbjct: 689 VKVYKSG-CVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILL 747
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
+GDDPW F N V I I S QDV++M
Sbjct: 748 MGDDPWEAFVNSVWSIKILSPQDVQQM 774
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 209/293 (71%), Gaps = 2/293 (0%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P DDL RE+WKAC+G L+DV K G+RVYYFP+ H+EQLE S+NQEL +++ L LP
Sbjct: 17 PFKGDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPP 76
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
KILCRV++I L+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT S
Sbjct: 77 KILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQS 136
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
D ++ G SV K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT
Sbjct: 137 DIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTN 196
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA AS
Sbjct: 197 GWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVAS 255
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
HA AT+++F VY KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 256 HAFATKSLFFVYQKP-CYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/386 (46%), Positives = 243/386 (62%), Gaps = 37/386 (9%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + +P + L +I C+V N
Sbjct: 42 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTYDLHPQIFCKVAN 100
Query: 79 IHLMAEQETDEVYAQITLLP---------EPSQNEPTTPD-----PCPADSPRPKVHSFS 124
+ L+A +E DEVY Q+TLLP E + E D PA S H F
Sbjct: 101 VQLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKS---TPHMFC 157
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPL P+QELVAKDLHG EW+F+HI+RGQPR
Sbjct: 158 KTLTASDTSTHGGFSVPRRAAEDCFPPLQ----RPSQELVAKDLHGVEWKFRHIYRGQPR 213
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV+ K+LV+GD +FLRGENGEL +G+R AR ++ +P S++ +QS +
Sbjct: 214 RHLLTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPN 273
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
L++ ++A++ ++MF V+Y PR + F++ +KY+ ++ N VG R+KM+F+ ++S
Sbjct: 274 FLSSVANAISARSMFHVFYSPR--ASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDES 331
Query: 305 PERR----------FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
PERR SG V G+ D P+ W SKWR L V+WDE DRVSPWE++
Sbjct: 332 PERRSTTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVD 391
Query: 354 PFVASATPNLVQPVLAKNKRPRLSME 379
P AS +P +Q + K+PR +E
Sbjct: 392 P-SASLSPLSIQ-ASRRLKKPRTDLE 415
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 628
ES S+ T+ RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K
Sbjct: 631 ESTSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKG 690
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
W ++YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 691 WRVLYTDRENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 734
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 235/339 (69%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----HSFSKVLTASDTSTH 135
+ A++ETDEVYAQ+TL P N T P PA K F K LTASDTSTH
Sbjct: 100 TMHADKETDEVYAQMTLQPV---NSETDVFPIPALGSYAKSKHPPEYFCKNLTASDTSTH 156
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 157 GGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLF 216
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V +KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++
Sbjct: 217 VGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAAAAHAASS 276
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F +YY PR T S F++ L +Y +A + +VGMR+ M FE E+S +RR++GT+VG
Sbjct: 277 GSSFTIYYNPR--TSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSKRRYTGTIVG 334
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
V D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 335 VSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 239/379 (63%), Gaps = 28/379 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL +PK+G V Y PQGH EQ+ Q P + LP ILCRV++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCRVID 96
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTA 129
+ L AE +DEVYAQ++L PE Q E + DS V H F K LTA
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTA 156
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLT
Sbjct: 157 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLT 216
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ +
Sbjct: 217 TGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDV 276
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR
Sbjct: 277 VNAVSSKSSFSVCYNPR--AASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRH 334
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA-SATPNLVQPV 367
+G + GV D P W S+WRSL V+WD+ R RVSPWEIEP + S + NLV P
Sbjct: 335 TGHITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPG 393
Query: 368 LAKNKRPRLSMEVPPLDLP 386
L KR R+ + L+ P
Sbjct: 394 L---KRTRIGLSSTKLEFP 409
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/361 (49%), Positives = 240/361 (66%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV Y PQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
++ + A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTH
Sbjct: 80 HDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 140 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 199
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 200 VSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 259
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I K+ +AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 260 NSRFTIFYNPR--ASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMGTIT 317
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G D P W +S WRS+KV WDE + R RVS W+IEP + P P + KR
Sbjct: 318 GKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPL--TTFPMYPSPFALRLKR 375
Query: 374 P 374
P
Sbjct: 376 P 376
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 650
VGR LD++ Y+ L ++ +MF ++GQL R+ W++V+ D E D +L+GD PW
Sbjct: 718 CVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEA 777
Query: 651 FCNMVKRIFICSSQDVKKM 669
F N V I I S D++ M
Sbjct: 778 FVNNVWYIKILSPHDIQMM 796
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 233/339 (68%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + L S++LC+V N+
Sbjct: 45 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQVHNV 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 105 TLHADRDTDEIYAQMSLQPVNSEKDVF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 161
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 162 GFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 221
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR RQQ+++PS V+S+ SMH+GVLA A+HA A +
Sbjct: 222 GSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAAAHAAANR 281
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY +AV + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 282 SPFTIFYNPRAC--PSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVG 339
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 340 ISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D++ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 836 RTYTKVQKAG-SVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYEND 894
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF V+ I I S +V++MS
Sbjct: 895 VLLIGDDPWEEFVGCVRCIRILSPSEVQQMS 925
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/360 (50%), Positives = 241/360 (66%), Gaps = 25/360 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPR 117
++ + A+ ETDEVYAQ+TL P P + D C A+ S +
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+H
Sbjct: 148 P-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYK 296
S SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFR 324
Query: 297 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 325 MLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 384
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 732 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 831
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 233/339 (68%), Gaps = 5/339 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + +IP + LPS++LC+V
Sbjct: 44 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQV 103
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N L A++ETDE+YAQ+TL P S+ E + F K LTASDTSTHG
Sbjct: 104 QNATLHADKETDEIYAQMTLQPLNSEREVFPISDFGLKHSKHPSEFFCKTLTASDTSTHG 163
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 164 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 223
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 224 GSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 283
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 284 SPFTIFYNPRAC--PSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVG 341
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 342 ISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 34/343 (9%)
Query: 348 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD----LPSAASAPWSARL------ 397
SPW ++P + S+ P+ +A+ ++ P LD L A+S P++ +
Sbjct: 589 SPWPMQPLIESSMPHPQMIGMAQADSAMVNGLFPQLDIDEWLAYASSQPFAGQNRPTGPF 648
Query: 398 --AQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSNSNFMSRTQSDGEWLTS--PRVK 451
Q HN Q V N+ W H K+ F S ++ ++ G + + P
Sbjct: 649 SDLQEHNSLQPQVVNPPLPSMNNEVWDHYVKNFKFLSQADQLTSICQPGMYGLNGVPSSN 708
Query: 452 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFG 509
+ L E+ + ++ A + T + T+L++ T + E C
Sbjct: 709 NLRDLSAESNNQSEICVNVDASNSVGTTMVDPSTSSTILDEFCTMKDGEFQNPQDC---- 764
Query: 510 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 569
++ + +SS + S+ E H +S G S +F E S
Sbjct: 765 --MVGNLSSSQDVQSQITSASLAESHAYPLRDIPDNSGGTSSSHVDFDES-------SFL 815
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--T 627
++ S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ +
Sbjct: 816 QNNSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGS 874
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 875 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 917
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 239/379 (63%), Gaps = 28/379 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL +PK+G V Y PQGH EQ+ Q P + LP ILCRV++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCRVID 96
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTA 129
+ L AE +DEVYAQ++L PE Q E + DS V H F K LTA
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTA 156
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLT
Sbjct: 157 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLT 216
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ +
Sbjct: 217 TGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDV 276
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR
Sbjct: 277 VNAVSSKSSFSVCYNPR--AASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRH 334
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA-SATPNLVQPV 367
+G + GV D P W S+WRSL V+WD+ R RVSPWEIEP + S + NLV P
Sbjct: 335 TGHITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPG 393
Query: 368 LAKNKRPRLSMEVPPLDLP 386
L KR R+ + L+ P
Sbjct: 394 L---KRTRIGLSSTKLEFP 409
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 234/337 (69%), Gaps = 7/337 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHSSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 218
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 219 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 278
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F VYY PR T S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+
Sbjct: 279 SFTVYYNPR--TSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSKRRCTGTIVGIS 336
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 337 DYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 231/339 (68%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G YYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 46 ELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQVQNV 105
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 106 TLHADKETDEIYAQMSLKPVNSEKDVF---PVPDFGLKPSKHPSEFFCKTLTASDTSTHG 162
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 GFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFV 222
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 223 GAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 282
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L Y +A+ + +VGMR+ M FE E+S +RR+ GT+V
Sbjct: 283 SPFTIFYNPRAC--PSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYMGTIVS 340
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 341 TSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 840 RTYTKVQKTG-SVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 898
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 899 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 929
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/339 (51%), Positives = 233/339 (68%), Gaps = 5/339 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + +IP + LP ++LC+V
Sbjct: 41 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQLLCQV 100
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A++ETDE+YAQ+TL P S+ E + F K LTASDTSTHG
Sbjct: 101 QNVTLHADKETDEIYAQMTLQPLNSEREVFPISDFGHKHSKHPSEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 GSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 281 SPFTIFYNPRAC--PSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVG 338
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 339 ISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 512 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 571
++ + +SS + S+ TE H +S G S +F E S ++
Sbjct: 760 MVGNLSSSQDVQSQITSASLTESHAFPLRDIPDNSGGTSSSHVDFDES-------SFLQN 812
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKW 629
S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ + W
Sbjct: 813 NSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGW 871
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 872 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 912
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/313 (55%), Positives = 218/313 (69%), Gaps = 4/313 (1%)
Query: 1 MANRLGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE 58
M + LGS SQ D L RE+W+AC+G L+DVPK G+RV+YFP+ HM+QLE S+N E
Sbjct: 1 MVDLLGSNSQLKHFEGDNALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLE 60
Query: 59 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP 118
Q + L LP KILCRV++I L+ E +T+EVYA+ LLP QNEP+TP+ CP + PRP
Sbjct: 61 WIQGLQLSHLPRKILCRVLHIRLLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLEPPRP 120
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
+ SF K LT SD ++ G SV RK A +C PPLDM Q PTQEL+ DL G EWRFKH+
Sbjct: 121 QYQSFCKALTTSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHV 180
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
F+GQPRRHLL GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q +S+ SS S
Sbjct: 181 FQGQPRRHLLKHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSR 240
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
QSM GVLA ASHA AT+++F VYYKP R+SQFI+SL+ Y E N+ VG + +
Sbjct: 241 QSME-GVLAVASHAFATRSLFSVYYKP-CYNRSSQFIMSLSNYFEGGNHGPGVGTISRTQ 298
Query: 299 FEGEDSPERRFSG 311
DS +R SG
Sbjct: 299 HTSLDSHVKRTSG 311
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 239/345 (69%), Gaps = 12/345 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+EL+ +IP + LP +++C +
Sbjct: 18 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQLICHL 77
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT---PD-PCPADSPRPKVHSFSKVLTASDT 132
N+ + A+ ETDEVYAQ+TL P Q + + PD P+ P + F LTASDT
Sbjct: 78 HNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPS---NYFCXTLTASDT 134
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFS+ R+ A + P LD Q P QEL A+DLH EW+F+HI+RGQP+RHLLTTGW
Sbjct: 135 STHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLTTGW 194
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+R ++G+L +G+R + + MPSSV+SS SMH+GVLA A+HA
Sbjct: 195 SVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAAAHA 254
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 311
AT + F ++Y PR S+F+I +KY +AV + + +VG+R++M FE E+S RR+ G
Sbjct: 255 AATNSPFNIFYNPR--ASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYMG 312
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
T+ G+ D P W +S+WRSLKV WDE + R RVS WEIEP
Sbjct: 313 TITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPL 357
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 566 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH- 624
+SP+ + Q L + R+ TKV G ++GR++D+T GY L EL MF+++GQL
Sbjct: 723 ISPQAANLSQIHLPT-RTFTKVYKLG-SIGRSIDVTRFSGYPELRCELARMFNLEGQLED 780
Query: 625 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
R+ W++V+ D E D++L+GDDPW EF V+ I I S +V++M+
Sbjct: 781 CRSGWQLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMT 826
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 237/343 (69%), Gaps = 9/343 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 144
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRG P+RHLLTTGWS
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWSV 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR ++F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 TNSRFTIFYNPR--ASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 321
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 322 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 364
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 810
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/336 (51%), Positives = 234/336 (69%), Gaps = 6/336 (1%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIH 80
LW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 43 LWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVT 102
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPT-TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFS
Sbjct: 103 LHADKDSDEIYAQMSLQPVHSERDVLPVPDLGLLRGSKHPSEYFCKTLTASDTSTHGGFS 162
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 163 VPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSK 222
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F
Sbjct: 223 RLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPF 282
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
++++ PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 283 LIFFNPRAC--PAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISD 340
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 341 LDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK---WEIVYTDDEG 638
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L TR K W++VY D E
Sbjct: 730 RTYTKVQKTG-SVGRSIDVTSFRDYEELKTAIECMFGLEG-LLTRPKTSGWKLVYVDYES 787
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 788 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 234/337 (69%), Gaps = 7/337 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F VYY PR T S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+
Sbjct: 278 SFTVYYNPR--TSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGIS 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 336 DYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 231/339 (68%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 46 ELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQNV 105
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A++++DE+YAQ++L P S+ + P RP H F K LTASDTSTHG
Sbjct: 106 TLHADKDSDEIYAQMSLQPVNSEKDVFL---VPDFGLRPSKHPNEFFCKTLTASDTSTHG 162
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 GFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 222
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+KRL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 223 GAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 282
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY + V + + GMR+ M FE E+S +RR+ GT+VG
Sbjct: 283 SPFTIFYNPRAC--PSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVG 340
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 341 ISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T+ YD L +E MF ++G L+ + W++VY D E D
Sbjct: 835 RTYTKVQKAG-SVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 893
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF + V+ I I S +V++MS
Sbjct: 894 VLLIGDDPWEEFVSCVRCIRILSPSEVQQMS 924
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 234/337 (69%), Gaps = 7/337 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 218
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 219 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 278
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F VYY PR T S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+
Sbjct: 279 SFTVYYNPR--TSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGIS 336
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 337 DYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 240/363 (66%), Gaps = 10/363 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAG LV +P G RV YFPQGH+EQ+ AST +E + IP + LPS++ C +
Sbjct: 4 LNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFCLL 63
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
N+ L A+ ETDEVYAQ+TLLP + + P + F K LTASDTSTHG
Sbjct: 64 DNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSVIPNKQPSEYFCKTLTASDTSTHG 123
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFS+ R+ A + PPLD +S P QELVA+DLH +W F+HI+RGQPRRHLLTTGWS FV
Sbjct: 124 GFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWSVFV 183
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
+ KRL AGD+ +F+R + L +G+R RQQS MPSSV+SS SMH GVLA ASHA AT
Sbjct: 184 SIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAAATS 243
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY +A+ N + +GMR++M FE E+S R++ GT+
Sbjct: 244 SRFKIFYNPR--QSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTITC 301
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNK 372
+ D P W S WRSLKV WDE + R RVS WEIEP + TP L+ PV ++K
Sbjct: 302 IGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEP---TPTPFLLCPPPVALRSK 358
Query: 373 RPR 375
RP+
Sbjct: 359 RPQ 361
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 584 RTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 640
RT Q+ + +VGR+LD+ Y L EL F + + + + W+IV+ D+E D
Sbjct: 670 RTCFQVHKLGSVGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDDT 729
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+L+GDDPW EF VK I I S +V +M
Sbjct: 730 LLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/359 (50%), Positives = 245/359 (68%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++P + L SK+LC + N+
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGF
Sbjct: 90 TLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 270 FTVFYNPR--ASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGIS 327
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/379 (46%), Positives = 243/379 (64%), Gaps = 25/379 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH E ++ + + + +P + CRV+++
Sbjct: 53 ELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ-------DFPVTAYDIPPHVFCRVLDVK 105
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLTAS 130
L AE+ +DEVY Q+ L+PE Q E + + AD H F K LTAS
Sbjct: 106 LHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKTLTAS 165
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTT 225
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++GEL +G+R A+ +S+ +V S Q ++ L
Sbjct: 226 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATLKGVV 285
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++T+ F V Y PR +S+FII ++K+L++++ ++VGMR++MRFE ED+ ERR +
Sbjct: 286 NALSTRCAFSVCYNPRF--SSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERRCT 343
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVL 368
G + G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+ L
Sbjct: 344 GLIAGISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEIEPSGSASNSSNLMSAGL 402
Query: 369 AKNKRPRLSMEVPPLDLPS 387
KR R+ M L+ P+
Sbjct: 403 ---KRTRIGMTSVKLEFPT 418
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 234/342 (68%), Gaps = 6/342 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+N IP + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSLSPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + + P P + + F K LTASDTSTH
Sbjct: 82 HNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQPTNYFCKTLTASDTSTH 141
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 201
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 202 VSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 261
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L+KY +AV + + + MR++M FE ++S RR+ G +
Sbjct: 262 NSRFTIFYNPR--ASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVRRYMGRIT 319
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
G+ D P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 320 GISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPL 361
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ KV G +VGR+LD+ Y L +EL +MF + G+L R+ W++V+ D E D
Sbjct: 668 RTFVKVYKSG-SVGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDREND 726
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 682
++L+GDDPW F N V I I S DV+ M P+ + G
Sbjct: 727 VLLLGDDPWESFVNNVWYIKILSPDDVQNMGKHDVEPLNPMGG 769
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/395 (44%), Positives = 237/395 (60%), Gaps = 57/395 (14%)
Query: 19 YRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVN 78
Y ELW ACAGPL +PK+G V YFPQGH+EQ AS + IP + L +I CRVVN
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQF-ASFSPFKQLEIPNYDLQPQIFCRVVN 110
Query: 79 IHLMAEQETDEVYAQITLLPEPS---------------------QNEPTTPDPCPADSPR 117
+ L+A +E DEVY Q+TLLP+ PT P
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTP------- 163
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
H F K LT SDTSTHGGFSV R+ A +C PPLD P+QELVAKDLHG EW+F+H
Sbjct: 164 ---HMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRH 220
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--------------GENGELHVGVRC 223
I+RGQPRRHLLTTGWS FV K LV+GD +FLR G+NGEL +G+R
Sbjct: 221 IYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRR 280
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
R ++ +P S++ +Q+ + L++ ++A++T++MF V+Y PR ++F++ KY++
Sbjct: 281 AVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPR--ASHAEFVVPYQKYVK 338
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASI 341
++ N +G R+KMR E ++SPERR SG ++G+ D P+ W SKWR L V+WD+
Sbjct: 339 SIKNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTET 398
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
DRVSPWEI+P ++P QP L+ PRL
Sbjct: 399 NHQDRVSPWEIDP----SSP---QPPLSIQSSPRL 426
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 237/345 (68%), Gaps = 11/345 (3%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKIL 73
S+ + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++
Sbjct: 16 SEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLM 75
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTAS 130
C+V N+ L A+++TDE+YAQ++L P S+ + P P +P H F K LTAS
Sbjct: 76 CQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTAS 132
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTT
Sbjct: 133 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTT 192
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+
Sbjct: 193 GWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAA 252
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRF 309
HA A ++ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+
Sbjct: 253 HAAANRSPFTIFYNPRAC--PSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRY 310
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
GT+VG+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 311 MGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 815 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 873
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 874 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 904
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/381 (46%), Positives = 240/381 (62%), Gaps = 29/381 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL--FRLPSKILCRVVN 78
ELW ACAGPL+ +PK+G V Y PQGH E + Q P+ F +P + CRV++
Sbjct: 44 ELWHACAGPLISLPKRGSVVVYLPQGHFEHV---------QDFPVNAFDIPPHVFCRVLD 94
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLT 128
+ L AE+ +DEVY Q+ L+PE Q E + + AD H F K LT
Sbjct: 95 VKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKTLT 154
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 155 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLL 214
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + + +V S Q ++ L
Sbjct: 215 TTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATLMD 274
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
+A++T+ F V Y PR + FII ++K+LE+++ ++VGMR++MRFE ED+ +RR
Sbjct: 275 VVNALSTRCAFSVCYNPRYF--SXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRR 332
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQP 366
F+G + G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+
Sbjct: 333 FTGLIAGISDVDPVRWPGSKWRCLLVRWDD-IEAARHNRVSPWEIEPSGSASNSSNLMAA 391
Query: 367 VLAKNKRPRLSMEVPPLDLPS 387
L KR R+ M L+ P+
Sbjct: 392 GL---KRNRIEMTSAKLEFPN 409
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 171/381 (44%), Positives = 236/381 (61%), Gaps = 20/381 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+EQ+ + + LP + CRVV++
Sbjct: 41 ELWHACAGPLISLPKKGTVVVYLPQGHLEQVS-------DFPTSAYDLPPHLFCRVVDVK 93
Query: 81 LMAEQETDEVYAQITLLPEP---------SQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
L AE TD+V+AQ++L+PE + + + A H F K LTASD
Sbjct: 94 LHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCKTLTASD 153
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTG
Sbjct: 154 TSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTG 213
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS FV K+LV+GD +FLRG++GEL +G+R A+ +SS + SQ ++ + +
Sbjct: 214 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYSTVTDVVN 273
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
AV+T+ F VYY PR +S+FII K+L ++++ F+ GMR+KMRFE ED+ ERR++G
Sbjct: 274 AVSTKNAFNVYYNPR--ASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAERRYTG 331
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
+ G+ P W SKW+ L V+WD+ ++ RVSPWEIEP + ++ + + K
Sbjct: 332 LITGIGALDPIRWPGSKWKCLVVRWDD-IDTSKHGRVSPWEIEPSGSVSSSHSLMGTGLK 390
Query: 371 NKRPRLSMEVPPLDLPSAASA 391
R LS P +P+ A
Sbjct: 391 RSRIGLSATKPEFPVPNGNGA 411
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 234/339 (69%), Gaps = 11/339 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 44 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 104 TLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 160
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFV 220
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 221 SAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 281 SPFTIFYNPRAC--PSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVG 338
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 339 ISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 837 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 895
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 896 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 926
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 178/361 (49%), Positives = 234/361 (64%), Gaps = 11/361 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E + IP + L ++C + N+
Sbjct: 38 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHLICTLENV 97
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETD+VYAQ+ L+P + T P + F K LTASDTSTHGGFS
Sbjct: 98 TLHADLETDDVYAQMVLIPTQDPEKETMLLPDVVVQNKQPTEYFCKTLTASDTSTHGGFS 157
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTS 198
+ R+ A + P LD Q P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS F+++
Sbjct: 158 IPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSIFISA 217
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T +
Sbjct: 218 KRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAAASHAAQTSSR 277
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR S+F+I KY +AV + + VGMR++M FE E+S RR+ GTV G+
Sbjct: 278 FTIFYNPR--QSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRYMGTVTGIG 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRP 374
D P W +S WRSLKV WDE + R RVS WEIEP TP L+ P++ ++KR
Sbjct: 336 DLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL---TTPFLICPPPIVLRSKRA 392
Query: 375 R 375
R
Sbjct: 393 R 393
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 235/342 (68%), Gaps = 12/342 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS+++C+V N+
Sbjct: 45 ELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVHNV 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 105 TLHADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 161
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV
Sbjct: 162 GFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFV 221
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
++KRL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 222 SAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANR 281
Query: 257 TMFVVYYKPR---IITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGT 312
+ F ++Y PR + S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT
Sbjct: 282 SPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGT 341
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+VG+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 342 IVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 797 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 855
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 856 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 886
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/382 (49%), Positives = 254/382 (66%), Gaps = 14/382 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPSK+LC + N+
Sbjct: 27 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNLPSKLLCLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E S +P+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNKPQPEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + TP QELVA+DLH W+F+HI+RG+P+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV N++ + GMR++M FE E+S RR+ GT+ G+
Sbjct: 267 FTVFYNPR--ASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTRRYMGTITGIS 324
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 375
D P WK+S+WR+L+V WDE + R +RVS WEIEP A P + P L ++KRPR
Sbjct: 325 DIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPSPLFRSKRPR 381
Query: 376 ----LSMEVPPLDLPSAASAPW 393
L+ E LD PW
Sbjct: 382 QPGMLADEYSDLDNLFKRPMPW 403
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHEND 1045
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFINCVRCIKILSPQEVQQMS 1076
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/337 (51%), Positives = 231/337 (68%), Gaps = 7/337 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LP ++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR T S F+I L +Y +A + +VGMR+ M FE E+S +RR +G +VG+
Sbjct: 278 SFTIYYNPR--TSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGIS 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 336 DYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 842 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 900
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 901 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 931
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/359 (50%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++P + L SK+LC + N+
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP S + S +P+ F K LTASDTSTHGGF
Sbjct: 90 TLHADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 270 FTVFYNPR--ASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGIS 327
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/401 (44%), Positives = 246/401 (61%), Gaps = 29/401 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + ++ LPS + CRVV++
Sbjct: 49 ELWHACAGPLISLPKRGSVVVYFPQGHLEQLP-------DLPLAVYDLPSHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTAS 130
L AE +DEVYAQ++L+PE + E + A H F K LTAS
Sbjct: 102 LHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +GVR A+ + + ++ +
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLNQISPGDVA 281
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++T++ F +YY PR +S+FII NK+L++++ F+ GMR+KMRFE ED+ ERR++
Sbjct: 282 NAISTRSFFHIYYNPR--ASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERRYT 339
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP---NLVQP 366
G + GV + P W SKW+ L V+WD+ + R RVSPWE+EP + + N + P
Sbjct: 340 GIITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEPSGSGSISSSNNFMAP 398
Query: 367 VLAKNKR--PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
L +++ P E P +P AP ++S + Q
Sbjct: 399 GLKRSRSGLPSSKAEFP---IPDGIGAPGFRESSRSQEVLQ 436
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/365 (49%), Positives = 242/365 (66%), Gaps = 12/365 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + +P + LP ++ C +
Sbjct: 15 INQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLFCIL 74
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTST 134
NI L A+QE DEV+AQ+TL P P P + K + SFSK LTASDTST
Sbjct: 75 HNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 135 HGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSV 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +
Sbjct: 195 FVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAAS 254
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+
Sbjct: 255 TNSRFTIFYNPR--ASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTI 312
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAK 370
G+ D P W +S WRSLKV WDE + + RVS WEIEP P L+ L +
Sbjct: 313 TGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLR 369
Query: 371 NKRPR 375
+KRPR
Sbjct: 370 SKRPR 374
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 568 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 627
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 661 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 717
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 718 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 760
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/376 (48%), Positives = 246/376 (65%), Gaps = 17/376 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + +P + LP ++ C +
Sbjct: 15 INQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLFCIL 74
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTST 134
NI L A+QE DEV+AQ+TL P P P + K + SFSK LTASDTST
Sbjct: 75 HNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFS+ R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 135 HGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSV 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +
Sbjct: 195 FVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAAS 254
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTV 313
T + F ++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+
Sbjct: 255 TNSRFTIFYNPR--ASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTI 312
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAK 370
G+ D P W +S WRSLKV WDE + + RVS WEIEP P L+ L +
Sbjct: 313 TGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLR 369
Query: 371 NKRPR-----LSMEVP 381
+KRPR L M+ P
Sbjct: 370 SKRPRGTEEELQMKAP 385
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 568 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 627
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 649 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 705
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 706 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 748
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 243/361 (67%), Gaps = 8/361 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ P + L +++C++
Sbjct: 24 LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQLICQL 83
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P +Q + + P R + F K LTASDTSTH
Sbjct: 84 HNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNYFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V++KRLVAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA T
Sbjct: 204 VSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAAAAHAAPT 263
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR TS+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+
Sbjct: 264 NSRFTIFYNPR--ASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 321
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P W +S WRS+KV WDE + R RVS WEIEP + P P + KR
Sbjct: 322 GICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKR 379
Query: 374 P 374
P
Sbjct: 380 P 380
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 643
KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ E
Sbjct: 709 KVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGRE------ 761
Query: 644 GDDPWHEFCNMVKRIFICSSQDVKKM 669
EF + V I I S Q+V++M
Sbjct: 762 ------EFVSSVWCIKILSPQEVQQM 781
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/345 (47%), Positives = 224/345 (64%), Gaps = 21/345 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+EQL + + ++ LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKRGSIVVYVPQGHLEQLP-------DLPLGIYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTAS 130
L AE +D+VYAQ++L+PE + E + A H F K LTAS
Sbjct: 102 LHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +GVR A+ + + +Q ++ LA +
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQSSLADVA 281
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++ ++ F +YY PR +S+FII NK+L++++ F+ GMR KMRFE ED+ ERR++
Sbjct: 282 NAISMRSAFRIYYNPR--ASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERRYT 339
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
G + G+ + P W SKW+ L V+WD+ R RVSPWE+EP
Sbjct: 340 GLITGISELDPTRWPGSKWKCLLVRWDD-TEANRHSRVSPWEVEP 383
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 31 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 90
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 91 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 150
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 151 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 210
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 211 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 271 FTVFYNPR--ASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGIS 328
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 329 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 385
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 1005 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1063
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1064 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1094
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/362 (50%), Positives = 245/362 (67%), Gaps = 11/362 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPSK++C + NI
Sbjct: 31 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLVCLLHNI 90
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ E DEVYAQ+TL P PS E + +P+ F K LTASDTSTHGGF
Sbjct: 91 TLHADPEADEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQTEFFCKTLTASDTSTHGGF 150
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 151 SVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSG 210
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 211 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 271 FTVFYNPR--ASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESGTRRYMGTITGIS 328
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNKRP 374
D P WK+S+WR+L+V WDE + R +RVS WEIEP A P + P ++KRP
Sbjct: 329 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPTPPFFRSKRP 385
Query: 375 RL 376
RL
Sbjct: 386 RL 387
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTFTKVHKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1059
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V+++S
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQIS 1090
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 236/345 (68%), Gaps = 23/345 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV ASTN+E++ +IP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLICQL 68
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-CPADSPRPK---VHSFSKVLTASDT 132
N+ + A+ ETDEVYAQ+TL P +Q + DP PAD P + F K LTASDT
Sbjct: 69 HNVTMHADVETDEVYAQMTLQPLSAQEQK---DPYLPADLGTPSKQPTNYFCKTLTASDT 125
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD +Q P QELVA+DLHG EW+F+HIFRGQP+RHLLTTGW
Sbjct: 126 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGW 185
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV++KRLVAGD+ +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA
Sbjct: 186 SVFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 245
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 311
AT + F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ G
Sbjct: 246 AATNSRFTIFYNPR--ASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 303
Query: 312 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
T+ G+ D P W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 304 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 348
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 650
+ GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW E
Sbjct: 774 SFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQE 833
Query: 651 FCNMVKRIFICSSQDVKKM 669
F N V I I S ++V++M
Sbjct: 834 FVNSVSCIKILSPEEVQQM 852
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 244/359 (67%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 208
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 209 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 268
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 269 FTVFYNPR--ASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGIS 326
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 327 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 383
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 922 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 980
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 981 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1011
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/378 (46%), Positives = 235/378 (62%), Gaps = 24/378 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH EQ N +P + CRV+++
Sbjct: 53 ELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACN-------IPPHVFCRVLDVK 105
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC-PADSPRPKV---------HSFSKVLTAS 130
L AE+ +DEVY Q+ L+PE Q E + AD+ H F K LTAS
Sbjct: 106 LHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTAS 165
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTT 225
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRGE+GEL +G+R + +SS +S + G L
Sbjct: 226 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQLDPGSLMDVV 285
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++ ++ F V Y PR+ +S+FII +NK+L++++ ++ GMR++MRFE ED+ ERRF+
Sbjct: 286 NALSKRSAFSVCYNPRV--SSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERRFT 343
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVL 368
G + G+ D P W SKW+ L V+WD+ + +RVSPWEIEP AS + NL+ L
Sbjct: 344 GLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAASL 403
Query: 369 AKNKRPRLSMEVPPLDLP 386
KR R+ L+ P
Sbjct: 404 ---KRTRIGFTSAKLEFP 418
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 233/349 (66%), Gaps = 9/349 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-IPSYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R +R Q ++ SSV+S SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGD 320
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 321 LDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 838 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 896
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 897 ILLVGDDPWEEFVSCVKSIKILSSAEVQQMS 927
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 233/337 (69%), Gaps = 8/337 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGG 137
L A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGG
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGG 158
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+R QP+RHLLTTGWS FV
Sbjct: 159 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGG 277
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F VYY PR T S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+
Sbjct: 278 SFTVYYNPR--TSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGIS 335
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 336 DYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + +P + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE-TECVPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 262 FTIFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISE 319
Query: 319 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
+ WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 320 LDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 957 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1015
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1016 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1046
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 245/362 (67%), Gaps = 8/362 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
+ +ELW+ACAGPLV +P G V YFPQGH EQ+ AS ++++ +IP + LPSK+ C +
Sbjct: 32 INQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLFCLL 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
N+ L A+ ETDEVYAQ+TL P PS + S +P+ F K LTASDTSTH
Sbjct: 92 HNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQTDFFCKTLTASDTSTH 151
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 152 GGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 211
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL AGD+ +F+R + +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 212 VSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 271
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 272 NSPFTVFYNPR--ASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTIT 329
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
G+ D P WK+S+WR+L+V WDE + + +RVS WEIEP A + P ++KR
Sbjct: 330 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF--ICPPPFFRSKR 387
Query: 374 PR 375
PR
Sbjct: 388 PR 389
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GY L +L F I+GQL R + W++VY D E D
Sbjct: 997 RTYTKVYKRG-AVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1086
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + +P + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE-TECVPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 262 FTIFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISE 319
Query: 319 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
+ WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 320 LDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 751 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 809
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 810 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 840
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/341 (51%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS +++N +IP + LPSK+LC + N+
Sbjct: 26 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLLCLLHNV 85
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVY Q+TL P S + S +P+ F K LTASDTSTHGGF
Sbjct: 86 TLHADPETDEVYVQMTLQPVSSFDKDALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 145
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 146 SVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 205
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 206 KRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 265
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F VYY PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR GT+ G+
Sbjct: 266 FTVYYNPR--ASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMGTITGIS 323
Query: 318 DF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
D + WK+S+WR+L+V WDE + R +RVS WEIEP A
Sbjct: 324 DLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA 364
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R W++VYTD E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHEND 1059
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 241/396 (60%), Gaps = 19/396 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L A+ P +P + CRVV++
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSG-----PGAAVPPHVFCRVVDVS 93
Query: 81 LMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTA 129
L A+ TDEVYAQ++L+ E E C + P H F K LTA
Sbjct: 94 LHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTA 153
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLT 213
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS F+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+
Sbjct: 214 TGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEV 273
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+HAVA +++F +YY PR+ S+FII K++ + + F+VGMR+K+R+E ED+ ERR
Sbjct: 274 AHAVAVKSIFHIYYNPRL--SQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRR 331
Query: 310 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
+G ++G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +
Sbjct: 332 TGIIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HS 390
Query: 370 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
K + P + LP+ + + A A+ H + Q
Sbjct: 391 KRLKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 426
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 170/374 (45%), Positives = 227/374 (60%), Gaps = 51/374 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQL + + LP + CRVV++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTAS 130
L AE TDEVYAQ++L+PE + AD + H F K LTAS
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 161
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 221
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 281
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++
Sbjct: 282 NAISTRSVFNICYNPR--ASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYT 339
Query: 311 GTVVGVEDFSP-HWKDSKWR------------------------------SLKVQWDEPA 339
G + G+ D P W SKWR SL+V+WD+
Sbjct: 340 GLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD-I 398
Query: 340 SITRPDRVSPWEIE 353
R +RVSPWEIE
Sbjct: 399 EANRHNRVSPWEIE 412
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 253/383 (66%), Gaps = 19/383 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 44 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQLLCQVHNI 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ A+++TDEVYAQ+TL P S+ + P A S P + F K LTASDTSTHGG
Sbjct: 104 TMHADKDTDEVYAQMTLQPVNSETDVFPIQSLGSYAKSKHPAEY-FCKNLTASDTSTHGG 162
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 222
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L VGVR QQ+++ SSV+S+ SMH+GVLA A+HA ++ +
Sbjct: 223 AKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAAAAHAASSGS 282
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR T S F++ + +Y +A+ + +VGMR M E E+S +RR +GT+VGV
Sbjct: 283 SFTIYYNPR--TSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGKRRHTGTIVGVS 340
Query: 318 DFSP-HWKDSKWRSLKVQWD--EPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNK 372
D P W +SKWR+L+V+WD E RP+RVS W+IE TP +V P + N
Sbjct: 341 DSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE------TPENTIVLPSASLNS 394
Query: 373 RPRL--SMEVPPLDLPSAASAPW 393
+ + VP L++ SA +P+
Sbjct: 395 KRQCLPGYGVPGLEVASANMSPF 417
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDYEND 909
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 244/398 (61%), Gaps = 23/398 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + + ++P + CRVV+++
Sbjct: 30 ELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAA-------KVPPHVFCRVVDVN 82
Query: 81 LMAEQETDEVYAQITL----------LPEPSQNEPTTPDPCPADSPR--PKV-HSFSKVL 127
L A+ TDEVYAQ+TL + + E D AD+ + P++ H F K L
Sbjct: 83 LQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPHMFCKTL 142
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 143 TASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 202
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS FV K+LV+GD +FLRGE+GEL +GVR +A+ ++ P +Q L
Sbjct: 203 LTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQDPGHSSLG 262
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+HA+A ++ F VYY PR+ S+FII K++ +V F+ GMR+KMR+E ED+ ER
Sbjct: 263 NVAHALAVKSTFHVYYNPRLC--QSEFIIPYWKFMRSVGQPFSAGMRFKMRYENEDASER 320
Query: 308 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
R +G ++G + P SKW+ L V+WD+ RP+RVSPW+IE + + + +
Sbjct: 321 RSTGIIIGSRESDPKSYGSKWKCLVVRWDDDIEGRRPNRVSPWDIE-LTGAVSGSHLSIH 379
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
+K +P L P + LPS + + A A+ H + Q
Sbjct: 380 HSKRMKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQ 417
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/343 (51%), Positives = 234/343 (68%), Gaps = 6/343 (1%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+
Sbjct: 258 NNSPFTIFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTIT 315
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 316 GISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 231/350 (66%), Gaps = 20/350 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LP ++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLP-------------PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
FSV R+ A + P P D + P QEL+ +DLH W F+HI+RGQP+
Sbjct: 158 FSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPK 217
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+G
Sbjct: 218 RHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG 277
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VLA A+HA ++ F +YY PR T S F+I L +Y +A + +VGMR+ M FE E+S
Sbjct: 278 VLAAAAHAASSGGSFTIYYNPR--TSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEES 335
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+RR +G +VG+ D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 336 SKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 855 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 913
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 914 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 944
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 231/341 (67%), Gaps = 6/341 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 35 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLLHNV 94
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TLLP S E PRP+ F K LTASDTSTHGGF
Sbjct: 95 TLHADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTHGGF 154
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 155 SVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 214
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 215 KRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 274
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F++ KY +A+ N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 275 FTIFYNPR--ASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 332
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 333 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 373
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 1068
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 221/293 (75%), Gaps = 4/293 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY ELW ACAGPLV VP+ G +V+YFPQGH+EQ+ A N++ +P++ LP KILC+VV
Sbjct: 1 LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDTSTH 135
++ L AE +TDEV+A ITLLP +E ++ + + +V SF+K LT SDTST
Sbjct: 61 HVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTSTQ 120
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV ++HA E LPPLD +Q P QEL+AKDLHG EWRF+HI+RGQP+RHLLT GWSTF
Sbjct: 121 GGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWSTF 180
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
++SKR+VAGD+F+FLRGE+GEL VGVR + ++++ ++V+++ SM LG+L++ASHA++T
Sbjct: 181 ISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIST 240
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
++F +++ P T ++FII ++Y+++ ++++G R+ M+FEGE+ E+R
Sbjct: 241 GSIFTIFFHPW--TSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 230/377 (61%), Gaps = 22/377 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR
Sbjct: 287 HAISTHSVFSISYNPK--ASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSP 344
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTT 402
Query: 370 KNKRPRLSMEVPPLDLP 386
KR R+ + D+P
Sbjct: 403 GPKRSRIGISSGKPDIP 419
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/343 (51%), Positives = 234/343 (68%), Gaps = 6/343 (1%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+
Sbjct: 258 NNSPFTIFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTIT 315
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 316 GISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/359 (48%), Positives = 241/359 (67%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI-LCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ ++ ++ ++ ++
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFAFLKLCSL 89
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGF
Sbjct: 90 YLXADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGF 149
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 150 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 209
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 210 KRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 269
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 270 FTVFYNPR--ASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGIS 327
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 229/377 (60%), Gaps = 22/377 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR
Sbjct: 287 HAISTHSVFSISYNPK--ASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSP 344
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTT 402
Query: 370 KNKRPRLSMEVPPLDLP 386
KR R+ D+P
Sbjct: 403 GPKRSRIGFSSGKPDIP 419
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/377 (45%), Positives = 229/377 (60%), Gaps = 22/377 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 106
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTT------PDPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR
Sbjct: 287 HAISTHSVFSISYNPK--ASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSP 344
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 345 GIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTT 402
Query: 370 KNKRPRLSMEVPPLDLP 386
KR R+ D+P
Sbjct: 403 GPKRSRIGFSSGKPDIP 419
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 12 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 71
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 72 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 131
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 132 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 191
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 192 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 251
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 252 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 309
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 310 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 989 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1047
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1048 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1078
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 50 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 109
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 110 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 169
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 170 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 229
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 230 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 289
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 290 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 347
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 348 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1116
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 240/362 (66%), Gaps = 10/362 (2%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 7 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 66
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ ++A+ +TDEVYA++TL P + ++ T RP+ F K LTASDTSTHGG
Sbjct: 67 VTMLADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 126
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 127 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 186
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 187 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 246
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 247 QFTIYYNPR--ASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGI 304
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
D P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRP
Sbjct: 305 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRP 361
Query: 375 RL 376
RL
Sbjct: 362 RL 363
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 978 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1066
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 27 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 267 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 324
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 325 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1004 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1062
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1063 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1093
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 27 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 86
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 87 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 146
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 147 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 206
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 266
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 267 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 324
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 325 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1061
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1062 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1092
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 237/362 (65%), Gaps = 10/362 (2%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 79 IHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+ ++A+ +TDEVYA++TL P E RP+ F K LTASDTSTHGG
Sbjct: 84 VTMLADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 143
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 144 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 203
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 204 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 263
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 264 QFTIYYNPR--ASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGI 321
Query: 317 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 374
D P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRP
Sbjct: 322 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRP 378
Query: 375 RL 376
RL
Sbjct: 379 RL 380
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 995 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1083
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 234/359 (65%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + N+
Sbjct: 50 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 109
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 110 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGF 169
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 170 SVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 229
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 230 KRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 289
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 290 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 347
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 348 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 857 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 915
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 916 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 946
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 259/411 (63%), Gaps = 21/411 (5%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 34 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 88
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 89 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 148
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+D+H W F+HIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQP 208
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 209 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 268
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
GVLA A+HA A + F ++Y PR + ++F+I K+ +A+ +N+ ++GMR++M FE E
Sbjct: 269 GVLAAAAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETE 328
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 329 ELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---P 385
Query: 362 NLV--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SARLAQSHNLT 404
+ QP KRPR + E ++ + PW + AQ+HN T
Sbjct: 386 FFICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTT 435
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1016 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1105
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 TLHADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTITGISD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 320 MDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL + W++VY D E D
Sbjct: 930 RTYTKVQKRG-SVGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 988
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 989 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1019
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 238/365 (65%), Gaps = 13/365 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P QG + YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ ++A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 84 VTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTST 143
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 203
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 263
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+ F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 264 NNSQFTIYYNPR--ASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 321
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
G+ D P WK S WR+++V WDE A R RVS WEIEP +A P + P L
Sbjct: 322 TGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTA 378
Query: 372 KRPRL 376
KRPRL
Sbjct: 379 KRPRL 383
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 998 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1086
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 239/395 (60%), Gaps = 22/395 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E L A+ +P + CRVV++
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVP-----PHVFCRVVDVS 93
Query: 81 LMAEQETDEVYAQITLLP----------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTAS 130
L A+ TDEVYAQ++L+ E E PA P H F K LTAS
Sbjct: 94 LHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIP----HMFCKTLTAS 149
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 150 DTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTT 209
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS F+ K+LV+GD +FLRGE+GEL +GVR A+ ++ P + +Q L+ +
Sbjct: 210 GWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSLSEVA 269
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HAVA +++F +YY PR+ S+FII K++ + + F+VGMR+K+R+E ED+ ERR +
Sbjct: 270 HAVAVKSIFHIYYNPRL--SQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRT 327
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 370
G ++G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K
Sbjct: 328 GIIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSK 386
Query: 371 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
+ P + LP+ + + A A+ H + Q
Sbjct: 387 RLKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 421
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 245/365 (67%), Gaps = 12/365 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
+L ELW+ACAGPLV++P G V YFPQGH EQ+ AS +++ +IP + LP+K++C
Sbjct: 15 NLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAKLICL 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P PS E + +P+ F K LTASDTST
Sbjct: 75 LHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQPEFFCKTLTASDTST 134
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPLD + P QELVA+DLH W F+H++RGQP+RHLLTTGWS
Sbjct: 135 HGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLTTGWSL 194
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
V+ KRL AGD+ +F+R E + +G+R RQ +++ SSV+SS SMH+G+LA A+HA A
Sbjct: 195 VVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 254
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+ F V+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+
Sbjct: 255 NNSPFTVFYNPR--AGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYMGTI 312
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAK 370
G+ D P WK+S+WR+L+V WDE + R +RVS WEIEP A P L+ P +
Sbjct: 313 TGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITA---PFLICSSPFFS- 368
Query: 371 NKRPR 375
+KRPR
Sbjct: 369 SKRPR 373
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 978 RTYTKVYKRG-AVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1036
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I S Q+V++MS
Sbjct: 1037 VLLVGDDPWEEFVSCVRCIKILSPQEVQQMS 1067
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 226/377 (59%), Gaps = 20/377 (5%)
Query: 40 VYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE 99
V Y PQGH++ L + + CRVV++ L A+ TDEVYAQ++LLPE
Sbjct: 1 VVYLPQGHLDHLGDAPAPSPAAVP------PHVFCRVVDVTLHADASTDEVYAQLSLLPE 54
Query: 100 PSQ-----NEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTHGGFSVLRKHATEC 148
+ E T D K H F K LTASDTSTHGGFSV R+ A +C
Sbjct: 55 NEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDC 114
Query: 149 LPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFV 208
PPLD +Q P QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +
Sbjct: 115 FPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 174
Query: 209 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRII 268
FLRG++GEL +GVR + ++ + SQ +LG LA +HAVAT++MF ++Y PR+
Sbjct: 175 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRL- 233
Query: 269 TRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKW 328
S+FI+ K+ ++ + F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW
Sbjct: 234 -SQSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPMWRGSKW 292
Query: 329 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSA 388
+ L V+WD+ RP+RVSPWEIE +++ +L P +K +P L P +P
Sbjct: 293 KCLLVRWDDDGEFRRPNRVSPWEIELTSSASGSHLAAPT-SKRMKPYLPHANPEFTVPHG 351
Query: 389 ASAPWSARLAQSHNLTQ 405
P A AQ + Q
Sbjct: 352 GGRPDFAESAQVRKVLQ 368
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 229/341 (67%), Gaps = 6/341 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + NI
Sbjct: 45 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICLLHNI 104
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGF
Sbjct: 105 TLHADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRPQNEFFCKTLTASDTSTHGGF 164
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 165 SVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 224
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 225 KRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHADANNSP 284
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 285 FTIFYNPR--ASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITGIS 342
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 343 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 383
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1015 RTFTKVYKRG-AVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDD 1073
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1074 ILLLGDDPWEEFVNCVKYIRILSPQEVQQMS 1104
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 217/310 (70%), Gaps = 11/310 (3%)
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFS 124
+I CRV+++ L A+QE D+VYAQ+TLLPE NE + + ++ H F
Sbjct: 1 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPR
Sbjct: 61 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
+L+ A++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS
Sbjct: 181 ILSPAANALSTKSMFHVFYSPR--ASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDS 238
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
E+R +G + G D P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L
Sbjct: 239 AEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPAL 296
Query: 364 VQPVLAKNKR 373
PV + KR
Sbjct: 297 SCPVAPRIKR 306
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 230/383 (60%), Gaps = 23/383 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 105 LHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTAS 164
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ A
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFAEVV 284
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA++T + F +YY P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR
Sbjct: 285 HAISTNSAFNIYYNPK--ASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRSP 342
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEP-ASITRPDRVSPWEIEPFVASATPNLVQPVL 368
G + G+ D P W SKWR L V+WD+ A+ R+SPWEIEP + ++ +
Sbjct: 343 GIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSF--IT 400
Query: 369 AKNKRPRLSMEVPPLDLPSAASA 391
KR R+ D+P + S
Sbjct: 401 TGPKRSRIGFSSGKPDIPVSGSG 423
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 230/349 (65%), Gaps = 9/349 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS F+++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFIST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F +YY PR S+F++ L KY +A+ + ++GMR++M FE E+S RR+ GTV G+ D
Sbjct: 262 FTIYYNPR--ASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGISD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
P WK+S+WR+L+V WDE + RP RVS W+IEP V TP + P
Sbjct: 320 LDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV---TPFYICP 365
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 993 RTYTKVQKRG-SVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1051
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1052 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1082
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 226/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQSRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK S+WR+L+V WDE + RP RVS WE+EP V
Sbjct: 320 LDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVV 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VY D E D
Sbjct: 992 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 1050
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1051 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1081
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 243/361 (67%), Gaps = 10/361 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPL+++P G V YFPQGH EQ+ AS ++++ ++P + LPSKI C + N+
Sbjct: 28 ELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNV 87
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+TL P PS + S +P+ F K LTASDTSTHGGF
Sbjct: 88 TLHADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLRSSKPQPEFFCKQLTASDTSTHGGF 147
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH WRF+HI+RGQP+RHLLTTGWS F+
Sbjct: 148 SVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFIGG 207
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA +
Sbjct: 208 KRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSP 267
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV ++ + GMR++M FE EDS RR+ GT++GV
Sbjct: 268 FTVFYNPR--ASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGTRRYMGTIIGVS 325
Query: 318 DF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPR 375
D S WK+S WR+L+V WDE + R RVS WEIEP TP + P ++K PR
Sbjct: 326 DLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPV---TTPYFICPPPFFRSKIPR 382
Query: 376 L 376
L
Sbjct: 383 L 383
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1076
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 231/377 (61%), Gaps = 23/377 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V Y PQGH+E L + N LP + CRVV++
Sbjct: 55 ELWHACAGPLISLPKKGSAVVYLPQGHLEHLSEYPSIACN-------LPPHVFCRVVDVK 107
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----------HSFSKVLTAS 130
L A+ TDEVYAQ++L+P+ Q E D + H F K LTAS
Sbjct: 108 LQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTAS 167
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 168 DTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTT 227
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLR +GEL +GVR A+ ++ S+ +++ + A
Sbjct: 228 GWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVSGIVDAV 287
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+ ++++ F + Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+
Sbjct: 288 NVISSRNAFNICYNPR--DSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFT 345
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G VVGV + P W SKWR L V+WD+ ++R +RVSPWEIEP ++ P+ + V+
Sbjct: 346 GLVVGVSNVDPVRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEPSGSAPVPSSL--VMP 402
Query: 370 KNKRPRLSMEVPPLDLP 386
KR R+ + D P
Sbjct: 403 SAKRTRVGFPISKADFP 419
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/380 (48%), Positives = 248/380 (65%), Gaps = 24/380 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++
Sbjct: 218 AKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSA- 276
Query: 258 MFVVYYKPRIITRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ + RT S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG
Sbjct: 277 ----FGHSWNLHRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVG 332
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNK 372
+ D+ P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N
Sbjct: 333 ISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNS 386
Query: 373 R----PRLSMEVPPLDLPSA 388
+ P + VP +++ SA
Sbjct: 387 KRQCLPGYGVSVPGMEIGSA 406
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/349 (49%), Positives = 233/349 (66%), Gaps = 9/349 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGD 320
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 243/361 (67%), Gaps = 10/361 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPL+++P G V YFPQGH EQ+ AS ++++ ++P + LPSKI C + N+
Sbjct: 28 ELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNV 87
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+ L P PS + +P+ F K LTASDTSTHGGF
Sbjct: 88 TLHADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEFFCKQLTASDTSTHGGF 147
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + +P QELVA+DLH WRF+HI+RG+P+RHLLTTGWS F++
Sbjct: 148 SVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLLTTGWSLFISG 207
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA +
Sbjct: 208 KRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSP 267
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +AV ++ + GM ++M FE EDS RR+ GT++GV
Sbjct: 268 FTVFYNPR--ASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGTRRYMGTIIGVS 325
Query: 318 DF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPR 375
D S WK+S WR+L+V WDE + R RVS WEIEP TP + P ++KRPR
Sbjct: 326 DLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPV---TTPYFICPPPFFRSKRPR 382
Query: 376 L 376
L
Sbjct: 383 L 383
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 228/339 (67%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQNQQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVRRYMGTITGITD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 320 LDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 998 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1056
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1057 ILLVGDDPWEEFVSCVQSIKILSSSEVQQMS 1087
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/356 (48%), Positives = 234/356 (65%), Gaps = 11/356 (3%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ NSD LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 32 GEKKAPAINSD-----LWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPN 86
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + NI L A+ ETDEVYA++TL P S E RP+ F
Sbjct: 87 YPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFF 146
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP
Sbjct: 147 CKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQP 206
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+
Sbjct: 207 KRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHI 266
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
G+LA A+HA A + F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E
Sbjct: 267 GILAAAAHAAANNSPFTIFYNPR--ASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETE 324
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 325 ELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/356 (48%), Positives = 234/356 (65%), Gaps = 11/356 (3%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ NSD LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 32 GEKKAPAINSD-----LWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPN 86
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + NI L A+ ETDEVYA++TL P S E RP+ F
Sbjct: 87 YPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFF 146
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP
Sbjct: 147 CKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQP 206
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+
Sbjct: 207 KRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHI 266
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
G+LA A+HA A + F ++Y PR ++F+I KY +AV N+ ++GMR++M FE E
Sbjct: 267 GILAAAAHAAANNSPFTIFYNPR--ASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETE 324
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 325 ELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/376 (47%), Positives = 245/376 (65%), Gaps = 17/376 (4%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 30 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 84
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 85 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 144
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD + P QEL A+D+H W F+HIFRGQP
Sbjct: 145 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQP 204
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 205 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 264
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
GVLA A+HA A + F ++Y PR ++F+I KY +A+ +N+ ++GMR++M FE E
Sbjct: 265 GVLAAAAHAAANNSPFTIFYNPR--ASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETE 322
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 323 ELGMRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---P 379
Query: 362 NLV--QPVLAKNKRPR 375
+ QP KRPR
Sbjct: 380 FFICPQPFFGV-KRPR 394
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 233/358 (65%), Gaps = 10/358 (2%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE--LNQRIPLF-RLPSKILCRVVN 78
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + IP + LP+ ++C + N
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAHLICHLHN 75
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T +
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F ++Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+
Sbjct: 254 RFTIFYNPR--ASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGI 311
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
D S W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 312 GDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 638
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 825 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 884
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 885 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 916
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 237/359 (66%), Gaps = 9/359 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E++ IP + LP
Sbjct: 14 PEGEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVD-VIPNYPSLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLT 128
SK++C+++++ L A+ ETDEVYAQ+TL P + + + + F K LT
Sbjct: 73 SKLICKLLSLTLHADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQNKQPMEFFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV++KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAA 252
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A+HA A + F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR
Sbjct: 253 AAHAAANSSPFTIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
+ GT+ G+ D P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 947 RTFTKVQKRG-SVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 1005
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 1006 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1036
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 239/399 (59%), Gaps = 23/399 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 36 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAA------VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKV---HSFSKV 126
L A+ TDEVYA+++LLPE + E D + +P H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTPHMFCKT 149
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRH
Sbjct: 150 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 209
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
LLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ + P + +Q L
Sbjct: 210 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALHNQCSSQTTL 269
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
+ AVAT+T+F +YY PR+ S+FI+ K+ ++N +VGMR +MR+E +D+ E
Sbjct: 270 GNVAQAVATRTVFHIYYNPRL--SQSEFIVPYWKFTRSLNQPISVGMRCRMRYESDDASE 327
Query: 307 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
RR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + ++ P
Sbjct: 328 RRCTGIIIGSREAEPIWYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSGSHMCAP 387
Query: 367 VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
+K +P L P + LP+ + + A + H + Q
Sbjct: 388 N-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSVRFHKVLQ 425
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 226/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYEKEAILASDIGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + LPPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F++ L KY +A+ + ++GMR++M FE E+S R + GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRGYMGTITGISD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 320 LDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1008 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1066
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1067 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1097
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 236/400 (59%), Gaps = 22/400 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSK 125
L A+ TDEVYA+++LLPE E D + RP H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCK 149
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRR 209
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q
Sbjct: 210 HLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSN 269
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L + AVAT+T+F +YY PR+ S+FI+ K+ + N +VGMR +MR+E +D+
Sbjct: 270 LGNVAQAVATKTVFHIYYNPRLT--QSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDAS 327
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
ERR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + +
Sbjct: 328 ERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCA 387
Query: 366 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
P +K +P L P + LP+ + + A A+ H + Q
Sbjct: 388 PS-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 237/379 (62%), Gaps = 22/379 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +P++G V YFPQGH+EQ + QE + R + LP +I+CRVV++
Sbjct: 39 ELWHACAGPLISLPQKGSVVVYFPQGHLEQHQV---QESHTRT--YDLPPQIICRVVDVK 93
Query: 81 LMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L AE DE+YAQ++LL E S N R H F K LTA
Sbjct: 94 LQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTA 153
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+RGQPRRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLT 213
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLGVLAT 248
TGWS+F K+L GD +FLR ++GEL +G+R RQ Q +P + + Q + +L+
Sbjct: 214 TGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNMLSM 273
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
+ A++ + +F +YY PR ++F++ KYL + ++ F++GMR K+R E ED+ E+R
Sbjct: 274 VADALSVKKLFHIYYNPR--ASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKR 331
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
++G + GV D P W +SKWR L V+WD+ A DRVSPWEIE +S + P+
Sbjct: 332 YTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSLVSSFSFPL 389
Query: 368 LAKNKRPRLSMEVPPLDLP 386
+ +KRP+++ D+P
Sbjct: 390 KSTSKRPKMNFPSIITDIP 408
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 498 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 555
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 649 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 700
Query: 556 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 701 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 754
Query: 616 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 755 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 806
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/348 (50%), Positives = 238/348 (68%), Gaps = 6/348 (1%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKI 72
N + ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++ + ++P + LPSK+
Sbjct: 24 NDGGVNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKL 83
Query: 73 LCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASD 131
C + ++ L A+ +TDEVYA++TL P S + + S +P+ F K LTASD
Sbjct: 84 PCTLHSLTLHADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEFFCKQLTASD 143
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A + PPLD + P QELVAKDLHG W+F+HI+RGQP+RHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTG 203
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
WS F++ KRL+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+H
Sbjct: 204 WSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAH 263
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFS 310
A A + F V+Y PR S+F+I L KY AV +++ + GMR++M FE EDS RR+
Sbjct: 264 ASANNSPFTVFYNPR--ASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYM 321
Query: 311 GTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
GTV+GV D S WK+S+WR+L+V WDE + R RVS WEIEP A
Sbjct: 322 GTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 984 RTYTKVYKRG-AVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 236/400 (59%), Gaps = 22/400 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+ +P++G V Y PQGH+E + + +P +LCRVV++
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRVVDVT 89
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSK 125
L A+ TDEVYA+++LLPE E D + RP H F K
Sbjct: 90 LHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCK 149
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRR 209
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q
Sbjct: 210 HLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSN 269
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L + AVAT+T+F +YY PR+ S+FI+ K+ + N +VGMR +MR+E +D+
Sbjct: 270 LGNVAQAVATKTVFHIYYNPRLT--QSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDAS 327
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
ERR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + +
Sbjct: 328 ERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCA 387
Query: 366 PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
P +K +P L P + LP+ + + A A+ H + Q
Sbjct: 388 PS-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 183/359 (50%), Positives = 246/359 (68%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS N++ + +IP + LPSK+LC + N+
Sbjct: 25 ELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKLLCLLHNL 84
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L+A+ ETDEVYAQITL P PS + S +P+ F K LTASDTSTHGGF
Sbjct: 85 TLLADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQPDFFCKQLTASDTSTHGGF 144
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 145 SVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSG 204
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 205 KRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 264
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR T S+F+I L KY ++V +++ ++GMR++M FE EDS RR+ GT+ G+
Sbjct: 265 FTVFYNPR--TSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGIS 322
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 323 DLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFF--ICPPPFFRSKRPR 379
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 998 RTYTKVYKRG-AVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1087
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 232/349 (66%), Gaps = 9/349 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVY Q+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 263 FTIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGD 320
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 233/358 (65%), Gaps = 10/358 (2%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQE--LNQRIPLF-RLPSKILCRVVN 78
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + IP + LP+ ++C + N
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAHLICHLHN 75
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I L A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T +
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F ++Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+
Sbjct: 254 RFTIFYNPR--ASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGI 311
Query: 317 EDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
D S W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 312 GDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 638
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 822 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 881
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 882 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 913
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 224/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F++ L KY + + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVRRYMGTITGIND 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 320 LDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1003 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1061
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1062 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1092
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/339 (51%), Positives = 225/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 9 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-GIPSYPNLPSKLICMLHNV 67
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 68 TLHADTETDEVYAQMTLQPVNKYDQEALLLSEMGLKQNRQPAEFFCKTLTASDTSTHGGF 127
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+A+DLH W F+HI+RGQP+RHLLTTGWS F++S
Sbjct: 128 SVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTTGWSVFISS 187
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 188 KRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 247
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ GV D
Sbjct: 248 FTIFYNPR--ASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGVSD 305
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 306 LDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 344
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T +GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 997 RTYTKVQKRG-SVGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1055
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
++LVGDDPW EF + V+ I I S +V++MS L
Sbjct: 1056 ILLVGDDPWEEFVSCVQSIKILSCAEVQQMSLNGDL 1091
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/338 (50%), Positives = 225/338 (66%), Gaps = 23/338 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE+YAQ++L P ++ + P P RP H F K LTASDTSTHG
Sbjct: 80 TLHADKDTDEIYAQMSLQPVNTEKDVF---PIPDFGLRPSKHPSEFFCKTLTASDTSTHG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 137 GFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +
Sbjct: 197 GSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHATANR 256
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S F+I L K+ +AV + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 257 SPFTIFYNPRAC--PSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVG 314
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ D V+WDEP + +RVS WEIE
Sbjct: 315 ISDL-------------VEWDEPGCSDKQNRVSSWEIE 339
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 230/348 (66%), Gaps = 7/348 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTVPSYPSLPSKLICKLLSLT 83
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+ L P + + F K LTASDTSTHGGFS
Sbjct: 84 LHADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGFS 143
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTK 203
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RL+AGD+ +F+R E +L +G+R +R Q ++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 204 RLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPF 263
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 319
++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D
Sbjct: 264 TIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDL 321
Query: 320 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 322 DPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 939 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 997
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 998 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1028
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/376 (45%), Positives = 224/376 (59%), Gaps = 81/376 (21%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P LPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 60
Query: 78 NIHLMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKV 126
IHL E +DE Y +ITL+P+ P++NE + RP V+SF+KV
Sbjct: 61 AIHLKVENNSDETYVEITLMPDTTVSKNLQVVIPTENE---------NQFRPIVNSFTKV 111
Query: 127 LTASDTSTHGGFSVLRKHATECLPPL-----DMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
LTASDTS G FSV KHA ECLPPL DM+Q P QEL+A DLHG +WRFKH +R
Sbjct: 112 LTASDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR- 170
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
GD VF R + +SM
Sbjct: 171 ----------------------GDVIVFAR------------------------YNIESM 184
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
GV+A+A HA Q MF++ YKP R+SQ+I+S K+L+AVNNKF VG +Y MRFE
Sbjct: 185 RHGVIASAKHAFDNQCMFIMVYKP----RSSQYIVSHEKFLDAVNNKFNVGSKYTMRFED 240
Query: 302 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT- 360
+D E R+ GT++G+ DFSPHWK S+WRSL+VQWDE AS RP +VSPW+I+ ++S+
Sbjct: 241 DDLSETRYFGTIIGISDFSPHWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMSSSNV 300
Query: 361 ----PNLVQPVLAKNK 372
N+V+ + +K
Sbjct: 301 PRELCNMVKKIFIYSK 316
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 258/411 (62%), Gaps = 23/411 (5%)
Query: 6 GSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
G P+ N+D LW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P
Sbjct: 34 GERKAPAINAD-----LWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPS 88
Query: 66 F-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSF 123
+ LPSK++C + ++ L A+ +TDEVYAQ+TL P + E RP++ F
Sbjct: 89 YPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFF 148
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+D+H W F+HIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQP 208
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 243
+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+
Sbjct: 209 KRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHI 268
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGE 302
GVLA A+HA A + F ++Y PR ++F+I K+ +A+ +N+ ++GMR++M FE E
Sbjct: 269 GVLAAAAHAAANNSPFTIFYNPR--ASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETE 326
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P
Sbjct: 327 ELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---P 383
Query: 362 NLV--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SARLAQSHNLT 404
+ QP KRPR + E ++ + PW + AQ+HN T
Sbjct: 384 FFICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTT 433
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1014 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1103
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/359 (48%), Positives = 236/359 (65%), Gaps = 9/359 (2%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLP 69
P + ELW AC+GPLV +P G V YFPQGH EQ+ AS ++E++ IP + LP
Sbjct: 14 PEGEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVD-IIPNYPSLP 72
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
SK++C+++++ L A+ ETDEVYAQ+TL P + + V F K LT
Sbjct: 73 SKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPVEFFCKTLT 132
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLL 192
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV++KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAA 252
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A+HA A + F ++Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR
Sbjct: 253 AAHAAANSSPFTIFYNPR--ASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
+ GT+ G+ D P WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 226/337 (67%), Gaps = 15/337 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + ++P + LPS+++C+V N+
Sbjct: 48 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 107
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A++++DE+YAQ++L P S+ + PD + + F K LTASDTSTHGGF
Sbjct: 108 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLNRSKHPAEFFCKTLTASDTSTHGGF 167
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 168 SVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 227
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 228 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 287
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F+++Y PR ++F+I L KY +A+ + + GMR+ M FE EDS +R
Sbjct: 288 FLIFYNPRAC--PAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR---------S 336
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
D P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 337 DMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 675
W++VY D E D++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 408 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMKL 455
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 195/464 (42%), Positives = 268/464 (57%), Gaps = 24/464 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + N
Sbjct: 23 QELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHN 82
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ + A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 83 VTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASDTST 142
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTGWSL 202
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F++ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A
Sbjct: 203 FISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAA 262
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+ F ++Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 263 NNSQFTIFYNPR--ASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESGTRRYMGTI 320
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
G+ D P WK S+WRS++V WDE A R RVS WEIEP +A P + P L
Sbjct: 321 TGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIA---PFFIYPSPLFTA 377
Query: 372 KRPR----LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
KR R + E +D + PW +L + A + + W + +
Sbjct: 378 KRARQPGMIDDETSEMDNLFKRTMPWLGEDICKKDLNSQNSIAPGLNLVQSLQWMNMQQN 437
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 471
S ++ T E L S K Q L A D ++ IS P
Sbjct: 438 LS-----LAGTGMQPELLNSLASKHVQNL--SAADISRQISFQP 474
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 975 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1033
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1034 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 226/339 (66%), Gaps = 6/339 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + IP + LPSK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSKLICMLHNV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGF
Sbjct: 82 ALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + +
Sbjct: 202 KRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F ++Y PR S+F+I KY +A+ N ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 262 FTIFYNPR--ASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVRRYMGTITGITD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 320 VDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 995 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1053
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V+KMS
Sbjct: 1054 ILLVGDDPWEEFVSCVQSIKILSSAEVQKMS 1084
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/364 (47%), Positives = 237/364 (65%), Gaps = 13/364 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 26 QELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICILRS 85
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ ++A+ +TDEVYA++TL P + E RP+ F K LTASDTST
Sbjct: 86 VTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDTST 145
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSL 205
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 206 FVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAA 265
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 266 NNSQFTVFYNPR--ASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 323
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
G+ D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L
Sbjct: 324 TGISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIA---PFFIYPSPLFTA 380
Query: 372 KRPR 375
KRPR
Sbjct: 381 KRPR 384
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 977 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKD 1035
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F N V+ I I S Q+ ++M
Sbjct: 1036 VLLVGDDPWEDFVNCVRCIRILSPQEERQM 1065
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 242/359 (67%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS N++++ +IP + LPSK+LC + +
Sbjct: 10 ELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCLLHTL 69
Query: 80 HLMAEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TD+VYAQITL P PS + +S +P F K LTASDTSTHGGF
Sbjct: 70 TLHADPQTDQVYAQITLQPLPSFDKDALLRSDLALESTKPPPDFFCKQLTASDTSTHGGF 129
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVA+DLH W+F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 130 SVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSLFVSG 189
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 190 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSP 249
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY ++V +++ ++GMR++M FE EDS RR GTV G+
Sbjct: 250 FTVFYNPR--ASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTGIS 307
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 308 DLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 364
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 992 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMS 1081
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 246/393 (62%), Gaps = 16/393 (4%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
PSSN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 125
LPSK++C + ++ L A+ ETDEVYAQ+TL P E R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCK 128
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKR 188
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
HLLTTGWS FV++KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGI 248
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
LA A+HA A + F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED
Sbjct: 249 LAAAAHANANSSPFTIFFNPR--ASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG 306
Query: 306 ERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NL 363
RR+ GTV G+ D P WK S+WR+L+V WDE + RP RVS WEIEP + TP +
Sbjct: 307 VRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYI 363
Query: 364 VQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 393
P + K PR M LD+ +A + PW
Sbjct: 364 CPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 396
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/359 (48%), Positives = 238/359 (66%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + +
Sbjct: 41 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 100
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGF
Sbjct: 101 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGF 160
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 161 SVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 220
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 221 KRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 280
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 281 FTIFYNPR--ASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGIS 338
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 339 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 395
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 448 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 883 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 934
Query: 507 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 935 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 986
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 987 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1045
Query: 623 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1095
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/359 (48%), Positives = 238/359 (66%), Gaps = 8/359 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++C + +
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 103
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+L A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGF
Sbjct: 104 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGF 163
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 164 SVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 223
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 224 KRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 283
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+
Sbjct: 284 FTIFYNPR--ASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGIS 341
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 342 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 448 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 886 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 937
Query: 507 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 938 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 989
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 990 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1048
Query: 623 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1049 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1098
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 182/380 (47%), Positives = 240/380 (63%), Gaps = 13/380 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
+LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + ++
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYPNLPSKLICLLHSV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKINRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D
Sbjct: 262 FTIFFNPR--ASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL 376
P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPRQ 376
Query: 377 -SMEVPPLDLPSA--ASAPW 393
M LD+ +A + PW
Sbjct: 377 PGMPDDELDMENAFKRAMPW 396
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GY+ L ++L MF I+GQL + W++VYTD E D
Sbjct: 921 RTYTKVQKRG-SVGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHEND 979
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 980 ILLVGDDPWEEFVNCVQNIKILSSAEVQQMS 1010
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/380 (47%), Positives = 240/380 (63%), Gaps = 13/380 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
+LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C + ++
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYPNLPSKLICLLHSV 81
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGF
Sbjct: 82 TLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGF 141
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L + +R RQ ++ SSVISS SMH+G+LA A+HA A +
Sbjct: 202 KRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANNSP 261
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV GV D
Sbjct: 262 FTIFFNPR--ASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGVSD 319
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL 376
P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVI---TPFYICPPPFFRPKYPRQ 376
Query: 377 -SMEVPPLDLPSA--ASAPW 393
M LD+ +A + PW
Sbjct: 377 PGMPDDELDMENAFKRAMPW 396
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L ++L MF I+GQL + W++VYTD E D
Sbjct: 892 RTYTKVQKRG-SVGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHEND 950
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 951 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 981
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 226/367 (61%), Gaps = 32/367 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP+V +PK+G V YFPQGH+EQ+ + LP + RVV++
Sbjct: 24 ELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHF-----VGLSADALPPHVFSRVVHVT 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-------------SPRPKVHSFSKVL 127
LMA+ TDEVYAQ++L+P + + + P H F K L
Sbjct: 79 LMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIPHMFCKTL 138
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q PTQELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHIYRGQPRRHL 198
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +G+R + +S+ ++ +S ++
Sbjct: 199 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQNSN------IS 252
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+ A++ +++F + Y PR S+FI+ K++++ N+ ++G R+KM FE ED+ ER
Sbjct: 253 NIAQAISKKSLFHICYNPR--DGQSEFIVPYWKFMKSFNHPISIGTRFKMNFESEDASER 310
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
R++G + G+ D P W SKWR L V+WDE R +RVSPWEIE T + Q
Sbjct: 311 RYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE-----LTGTVSQG 365
Query: 367 VLAKNKR 373
++A N +
Sbjct: 366 MMAPNSK 372
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/375 (47%), Positives = 241/375 (64%), Gaps = 18/375 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPRWAA-PAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 313
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--P 368
Query: 370 KNKRPRLSMEVPPLD 384
RPR S + LD
Sbjct: 369 PFFRPRFSGQPGMLD 383
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1041 RTYTKVQERG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETD 1099
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ + I SS +V++MS
Sbjct: 1100 ILLVGDDPWEEFVNFVQSLKILSSAEVQQMS 1130
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 238/368 (64%), Gaps = 19/368 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 312
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 313 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--P 367
Query: 370 KNKRPRLS 377
RPR S
Sbjct: 368 PFFRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 238/368 (64%), Gaps = 19/368 (5%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 312
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 313 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--P 367
Query: 370 KNKRPRLS 377
RPR S
Sbjct: 368 PFFRPRFS 375
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 238/368 (64%), Gaps = 18/368 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPRWAA-PAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 313
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--P 368
Query: 370 KNKRPRLS 377
RPR S
Sbjct: 369 PFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/364 (46%), Positives = 235/364 (64%), Gaps = 13/364 (3%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVN 78
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + LPSK++C + +
Sbjct: 22 QELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 81
Query: 79 IHLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ + ++ ETDEVYA++TL P + E +P+ F K LTASDTST
Sbjct: 82 VTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDTST 141
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS
Sbjct: 142 HGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSL 201
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
F++ KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A
Sbjct: 202 FISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAA 261
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTV 313
+ F ++Y PR S+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 262 NNSQFTIFYNPR--ASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 319
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKN 371
G+ D P WK+S+WR+++V WDE A R RVS W+IEP +A P + P L
Sbjct: 320 TGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIA---PFFIYPTPLFTA 376
Query: 372 KRPR 375
KR R
Sbjct: 377 KRAR 380
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 970 RTYTKVHKRG-AVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1028
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1029 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1058
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 238/368 (64%), Gaps = 18/368 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPRWAA-PAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 313
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 314 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--P 368
Query: 370 KNKRPRLS 377
RPR S
Sbjct: 369 PFFRPRFS 376
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 235/363 (64%), Gaps = 13/363 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + L SK++C + ++
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 80 HLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
++A+ +TDEVYA++TL P + E RP+ F K LTASDTSTH
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 264 NSQFTVFYNPR--ASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTIT 321
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNK 372
G+ D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L K
Sbjct: 322 GISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAK 378
Query: 373 RPR 375
RPR
Sbjct: 379 RPR 381
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 548 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 933 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 991
Query: 608 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 992 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1051
Query: 666 VKKM 669
++M
Sbjct: 1052 ERQM 1055
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/363 (47%), Positives = 235/363 (64%), Gaps = 13/363 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + +IP + L SK++C + ++
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 80 HLMAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
++A+ +TDEVYA++TL P + E RP+ F K LTASDTSTH
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
V+ KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+
Sbjct: 264 NSQFTVFYNPR--ASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTIT 321
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNK 372
G+ D P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L K
Sbjct: 322 GISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAK 378
Query: 373 RPR 375
RPR
Sbjct: 379 RPR 381
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 548 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 607
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 934 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 992
Query: 608 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 993 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1052
Query: 666 VKKM 669
++M
Sbjct: 1053 ERQM 1056
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/338 (48%), Positives = 221/338 (65%), Gaps = 4/338 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E + L SK++C + N+
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFVPSYPNLTSKLICMLHNVT 82
Query: 81 LMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF
Sbjct: 83 LHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSRQPTEFFCKTLTASDTSTHGGFF 142
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 143 VPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTK 202
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
R+ GD+ +F+R E +L +G+R RQQ ++ SS+ISS SMH+G+LA A+HA A + F
Sbjct: 203 RIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAAAHAAANNSPF 262
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 319
++Y P S+F+I +KY +A+ + ++GMR++M F E+S RR+ GT+ G+ D
Sbjct: 263 TIFYNPS--ASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVRRYMGTITGISDL 320
Query: 320 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
P WK+S+WR+L+V WDE + RP+RVS WEIEP V
Sbjct: 321 DPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVV 358
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN---RSRTKVQMQGVA 593
+ST + +A S G S+I FK + ++ + + N R+ TKVQ +G +
Sbjct: 885 LSTAAISAQSFGVSNIP--FKPDGSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRG-S 941
Query: 594 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 651
VGR++D+T GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF
Sbjct: 942 VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEF 1001
Query: 652 CNMVKRIFICSSQDVKKMS 670
+ V+ I I SS +V++MS
Sbjct: 1002 MSCVQSIKILSSAEVQQMS 1020
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 227/341 (66%), Gaps = 6/341 (1%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ ++P + LPSK++C + ++
Sbjct: 33 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLICLLHSV 92
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ +TDEVYAQ+TL P E RP++ F K LTASDTSTHGGF
Sbjct: 93 ILQADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQMEFFCKTLTASDTSTHGGF 152
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + P LD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV+
Sbjct: 153 SVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTTGWSLFVSG 212
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
K+L AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 213 KKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSP 272
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F ++Y PR ++F+I KY +A+ +N+ ++GMR++M E E+ RR+ GT+ G+
Sbjct: 273 FTIFYNPR--ASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRYMGTITGIS 330
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
D P WK S+WRSL+V WDE A+ R +RVS WEIEP A
Sbjct: 331 DLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAA 371
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GY L L MF I+GQL R + W++VYTD E D
Sbjct: 1008 RTFTKVYKRG-AVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1097
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/357 (48%), Positives = 233/357 (65%), Gaps = 17/357 (4%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTAS 130
+ N+ L A+ ETDEVYAQ+TL P + D A K++ F K LTAS
Sbjct: 79 LQNVTLNADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+
Sbjct: 195 GWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAA 254
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+
Sbjct: 255 HANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYM 312
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
GTV G+ D P WK S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 313 GTVTGISDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP 366
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 973 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1031
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1032 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1062
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/365 (47%), Positives = 238/365 (65%), Gaps = 12/365 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ N+ L A+ ETDEVYAQ+TL P + +N D + +P F K LTASDTS
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDRNALLASDMGLKLNRQPN-EFFCKTLTASDTS 137
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
THGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 THGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWS 197
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
FV++KR AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA
Sbjct: 198 VFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHAN 257
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 313
A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV
Sbjct: 258 ANNSPFTIFYNPRWAA-PAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTV 316
Query: 314 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 372
G+ D P W++S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 317 TGISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFF 371
Query: 373 RPRLS 377
RPR S
Sbjct: 372 RPRFS 376
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 246/407 (60%), Gaps = 30/407 (7%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
P+SN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PTSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 125
LPSK++C + ++ L A+ ETDEVYAQ+TL P E R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCK 128
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKR 188
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFL--------------RGENGELHVGVRCLARQQSSM 231
HLLTTGWS FV++KRL AGD+ +F+ R E +L +G+R RQ ++
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTL 248
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAV 291
SSVISS SMH+G+LA A+HA A + F +++ PR S+FI+ L KY +A+ + ++
Sbjct: 249 SSSVISSDSMHIGILAAAAHANANSSPFTIFFNPR--ASPSEFIVPLAKYNKALYAQVSL 306
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 350
GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE + RP RVS W
Sbjct: 307 GMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIW 366
Query: 351 EIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 393
EIEP + TP + P + K PR M LD+ +A + PW
Sbjct: 367 EIEPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 410
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 968 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1026
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1027 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1057
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 233/378 (61%), Gaps = 48/378 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+ SMH+GVLA A+HA ++ +
Sbjct: 218 AKRLKAGDSVLFI-----------------------------SMHIGVLAAAAHAASSGS 248
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR T S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+
Sbjct: 249 SFTIYYNPR--TSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGIS 306
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR- 373
D+ P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 307 DYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKR 360
Query: 374 ---PRLSMEVPPLDLPSA 388
P + VP +++ SA
Sbjct: 361 QCLPGYGVSVPGMEIGSA 378
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 823 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 881
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 882 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 912
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 170/204 (83%), Gaps = 2/204 (0%)
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
AS TSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS SMHLGVLAT
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A HA+ T+TMF VYYKPR T S+FII +KY+++V N +++G R+KMRFEGE++PE+R
Sbjct: 121 AWHAINTKTMFTVYYKPR--TSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQR 178
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLK 332
F+GT+VG ++ W +S WRSLK
Sbjct: 179 FTGTIVGSDNLDQLWPESSWRSLK 202
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 224/383 (58%), Gaps = 51/383 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y ELW CAG L +PK+G V YFPQGH+EQ AS++ I F LP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 78 NIHLMAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSP 116
N+ L+A +E DEVY Q+TLLP+P PT P
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP------ 164
Query: 117 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 176
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+
Sbjct: 165 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 220
Query: 177 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 236
HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I
Sbjct: 221 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSII 280
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVN--NKFAVGMR 294
+Q+ + VL+ A++AVAT++MF + ++ + + L+ N NKF + M
Sbjct: 281 GNQNSYPNVLSLAANAVATKSMF---HGLKVFNKQTHL-----NMLQDGNQVNKFFLKML 332
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
++ ++ SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+
Sbjct: 333 PEIH-NLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEID 391
Query: 354 PFVASATPNLVQPVLAKNKRPRL 376
P V+ P L+ PRL
Sbjct: 392 PSVS-------LPPLSIQSSPRL 407
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 197/318 (61%), Gaps = 57/318 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LW CAGPL +PK G++VYYFPQGH+E +E ST EL+ P+F LPSK+ CRVV
Sbjct: 18 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 77
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
I ++ TDEVYAQI+L+P+ +
Sbjct: 78 AIDRKVDKNTDEVYAQISLMPDTT------------------------------------ 101
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 195
DM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 102 ---------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 146
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
T+KRL+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T
Sbjct: 147 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 206
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ MF V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++G
Sbjct: 207 KCMFNVVYKPS----SSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIG 262
Query: 316 VEDFSPHWKDSKWRSLKV 333
V D SPHWKDS+WRSLK+
Sbjct: 263 VNDMSPHWKDSEWRSLKI 280
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 571 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 630
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 355 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 414
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 415 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 459
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/377 (43%), Positives = 218/377 (57%), Gaps = 39/377 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTT------PDPCPADSPRPKV----HSFSKVLTAS 130
L AE TDEVYAQ++LLPE E D D K H F K LTAS
Sbjct: 105 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 164
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS FV K+LV+GD +FLRG++G+L +GV R+ S + +++ + + T +
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGV----RRASQIEGTLMPYRPIVFSAFTTTN 280
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
H A+ S FII K+L+ V+ F +GMR+K R E ED+ ERR
Sbjct: 281 HNWASW---------------SNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASERRSP 325
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V
Sbjct: 326 GIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP--SGSISNSGSFVTT 383
Query: 370 KNKRPRLSMEVPPLDLP 386
KR R+ D+P
Sbjct: 384 GPKRSRIGFSSGKPDIP 400
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/324 (49%), Positives = 218/324 (67%), Gaps = 8/324 (2%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA 113
TN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P Q + P
Sbjct: 1 TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60
Query: 114 DSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 172
+P R + F K LTASDTSTHGGFSV R+ A + PPLD Q P+QEL+A+DLHG E
Sbjct: 61 GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120
Query: 173 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
W+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ E +L +G+R R QS MP
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180
Query: 233 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAV 291
SSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L +Y +AV + + +V
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPR--ASPSEFVIPLTRYAKAVFHTRISV 238
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 350
GMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS W
Sbjct: 239 GMRFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLW 298
Query: 351 EIEPFVASATPNLVQPVLAKNKRP 374
EIEP + P P + +RP
Sbjct: 299 EIEPL--TTFPMYPSPFPLRLRRP 320
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
+R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E
Sbjct: 722 DRTFVKVHKLG-SYGRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDREN 780
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 781 DVLLLGDDPWQEFVNNVWCIKILSPQEVQQM 811
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 234/385 (60%), Gaps = 34/385 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ RELW ACAGP+V +P++G +V Y PQ H+ + + LP + CRVV
Sbjct: 24 VCRELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAVA-------LPPHVACRVV 76
Query: 78 NIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK--VHSFS 124
++ L A+ TDEVYA++ L+ E ++ E T D D R + F
Sbjct: 77 DVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTED---GDGERKSRMLQMFC 133
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LTASDTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG +WRF+HI+RGQPR
Sbjct: 134 KTLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPR 193
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS S +
Sbjct: 194 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMN 253
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
L+ ++++ +++F + Y PR S+FI+ K+L+++N+ F +GMR+K+++ ED
Sbjct: 254 ALSAVANSLKHRSVFHICYNPR--DAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDV 311
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
ERR SG + GV + P W S WRSL V+W++ +R+SPWEIE + + ++
Sbjct: 312 NERR-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE--IVGGSVSI 368
Query: 364 VQPVLA-KNKRPRL----SMEVPPL 383
Q + A +KR +L +++VP L
Sbjct: 369 AQSLPASSSKRTKLCSQSNLDVPTL 393
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 212/352 (60%), Gaps = 54/352 (15%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
P+ DDLY+ELW+ACAGPLV VP+ G++V Y+PQGHMEQ+EA NQ+ +P++ LPS
Sbjct: 37 PNDYHDDLYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYNLPS 96
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----EPTTPDPCPADSPRPKVHSFSK 125
KI C+V+N+ L AE TDEV+AQITLLPE Q+ E P P + + SFSK
Sbjct: 97 KIFCKVINVQLKAEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPR---KADLRSFSK 153
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LT+SDTSTHGGFSVL++HA ECLPP+DM+ P Q LVAKD+H
Sbjct: 154 KLTSSDTSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------- 197
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
GENGEL +G+R + S+ +SVIS+ SM G+
Sbjct: 198 --------------------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGI 231
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
L+ A HA+ T ++F VYY+P T ++FII ++Y+E+ +++VG + M FE E+
Sbjct: 232 LSMAFHAITTGSIFTVYYRP--WTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECA 289
Query: 306 ERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPF 355
E+R GT+VG ED W +S+WRSLK +WD + PDRVSPW I P
Sbjct: 290 EQRSEGTIVGNEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPI 341
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 571 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKW 629
SQ K C +N S TKV G A GR++D+T GYD LI EL++MFD KG L + W
Sbjct: 539 SQCKNCCSFTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGW 597
Query: 630 EIVYTDDEGDMML 642
E+ Y DDEGD+ML
Sbjct: 598 EVTY-DDEGDIML 609
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 225/376 (59%), Gaps = 19/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ L P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E ED+ ER F
Sbjct: 258 NSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF- 314
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLS 371
Query: 370 KNKRPRLSMEVPPLDL 385
+ R + PP DL
Sbjct: 372 SSVSKRTKLCFPPSDL 387
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 207/301 (68%), Gaps = 10/301 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + +IP + LPS++LC+V N+
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHG 136
L A+++TDE++AQ++L P S+ + P P +P H F K LTASDTSTHG
Sbjct: 80 TLHADKDTDEIHAQMSLQPVNSEKDVF---PVPDFGLKPSKHPSEFFCKALTASDTSTHG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD + P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 137 GFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 256
SKRL AGD+ +F+R E L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA +
Sbjct: 197 GSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAAAHAAGNR 256
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+ F ++Y PR S F+I L K+ + V + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 257 SPFTIFYNPRAC--PSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYMGTIVG 314
Query: 316 V 316
+
Sbjct: 315 I 315
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 155/382 (40%), Positives = 230/382 (60%), Gaps = 28/382 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ R+LW ACAGP+V +P++G + Y PQ H+ + + LP + CRVV
Sbjct: 20 VCRDLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPVG-------LPPHVACRVV 72
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPK--VHSFSKVL 127
++ L A+ TDEVYA++ L+ E E D D R +H F K L
Sbjct: 73 DVELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRMLHMFCKTL 132
Query: 128 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 187
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHL 192
Query: 188 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 247
LTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S + L+
Sbjct: 193 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLS 252
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+++ +++F + Y PR S+FI+ K+L+++N F +GMR+K+++ ED ER
Sbjct: 253 AVVNSLKHRSVFHICYNPR--AAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNER 310
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
R SG + G+ + P W SKW+SL V+W++ +R+SPWEIE + + ++ Q
Sbjct: 311 R-SGMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE--IVGGSVSIAQS 367
Query: 367 VLAKNKR-----PRLSMEVPPL 383
+ A + + P+ +++VP L
Sbjct: 368 LSASSSKRTKLCPQGNLDVPTL 389
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 227/380 (59%), Gaps = 24/380 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R+LW ACAGP+V +P++G V Y PQGH+ A + + + LP + CRVV++
Sbjct: 24 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSA--AGAGGRIRGEVAV-ALPPHVACRVVDV 80
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L E E + + +H F K LTA
Sbjct: 81 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 140
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 200
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+
Sbjct: 201 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 260
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ ++F + Y PR S++++ K++++ N+ +GMR+K +E ED ERR
Sbjct: 261 ADSLKHGSVFHICYNPRAT--ASEYVVPYWKFVKSFNHPVCIGMRFKFHYESEDVNERR- 317
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
SG + GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ +
Sbjct: 318 SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLS 375
Query: 369 AKNKR-----PRLSMEVPPL 383
A + + P+ +++VP L
Sbjct: 376 ASSSKRTKLCPQGNLDVPAL 395
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 227/355 (63%), Gaps = 30/355 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTST
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTST 146
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR------------GQ 182
HGGFSV R+ A PPL ++ S+ + LHG IF Q
Sbjct: 147 HGGFSVPRRAAERVFPPLVISHSSLQHRSL---LHG-------IFMMSSGNSGISSEASQ 196
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH
Sbjct: 197 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMH 256
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEG 301
+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE
Sbjct: 257 IGLLAAAAHAAATNSRFTIFYNPR--ASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFET 314
Query: 302 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
E+S RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 315 EESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 722 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 780
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 781 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 815
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/343 (48%), Positives = 226/343 (65%), Gaps = 11/343 (3%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E + IP + LPSK++C
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSKLICM 77
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+ N+ L A+ ETDEVYAQ+TL P + E R F K LTASDTST
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTST 137
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A + PPL+MN + L++ +H IF GQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLNMNMNVVI--LISLQIHK---NVHCIFSGQPKRHLLTTGWSV 192
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV++KRL AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A
Sbjct: 193 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 252
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
+ F ++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+
Sbjct: 253 NNSPFTIFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTIT 310
Query: 315 GVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
G+ D S WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 311 GISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 353
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 965 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1054
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 225/380 (59%), Gaps = 24/380 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R+LW ACAGP+V +P++G V Y PQGH+ A + L P + CRVV++
Sbjct: 81 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVAL---PPHVACRVVDV 137
Query: 80 HLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L E E + + +H F K LTA
Sbjct: 138 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 197
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLT
Sbjct: 198 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 257
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+
Sbjct: 258 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 317
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ ++F + Y PR S++++ K++++ N+ +GMR+K FE ED ERR
Sbjct: 318 ADSLKHGSVFHICYNPRAT--ASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR- 374
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
SG + GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ +
Sbjct: 375 SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLS 432
Query: 369 AKNKR-----PRLSMEVPPL 383
A + + P+ +++VP L
Sbjct: 433 ASSSKRTKLCPQGNLDVPAL 452
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/380 (42%), Positives = 226/380 (59%), Gaps = 16/380 (4%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSP------ 116
+P + CRVV+++L A+ TDEVYAQ++LL + + + + + C D
Sbjct: 32 VPPHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTGAAK 91
Query: 117 -RPKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
R ++ H F K LTASDTSTHGGFSV R+ A +C PPLD N P+QELVAKDLHG EWR
Sbjct: 92 RRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWR 151
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ ++ P
Sbjct: 152 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFP 211
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMR 294
+ +Q L L +HAVA +++F +YY PR+ S+FI+ K++ + + F+VGMR
Sbjct: 212 ALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLC--ESEFIVPYWKFMRSFSQPFSVGMR 269
Query: 295 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
+KM++E ED+ ERR +G + G + SKW+ L V+WD+ R +RVSPWEIE
Sbjct: 270 FKMKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIEL 329
Query: 355 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKR 414
+ + +L P +K +P L P + LPS + + A A+ H + Q K
Sbjct: 330 AGSVSGSHLSSP-HSKRLKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGSKA 388
Query: 415 IDNHVAWHHKHSDFSSNSNF 434
D V + S S NF
Sbjct: 389 HDGTVNSASEASQASEARNF 408
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 224/376 (59%), Gaps = 19/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E ED+ ER F
Sbjct: 258 NSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF- 314
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S LV L+
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSV---LVTHRLS 371
Query: 370 KNKRPRLSMEVPPLDL 385
+ R + PP DL
Sbjct: 372 SSVSKRTKLCFPPSDL 387
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 224/376 (59%), Gaps = 19/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-------DSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E ED+ ER F
Sbjct: 258 NSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF- 314
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLS 371
Query: 370 KNKRPRLSMEVPPLDL 385
+ R + PP DL
Sbjct: 372 SSVSKRTKLCFPPSDL 387
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 224/376 (59%), Gaps = 19/376 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAG V +P++G V Y PQ H+ P R+P ++CRVV++
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVCRVVDVE 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTAS 130
L A+ TDEVYA++ L+ + D D K H+ F K LTAS
Sbjct: 78 LRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTAS 137
Query: 131 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 190
DTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTT 197
Query: 191 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
GWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +
Sbjct: 198 GWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVA 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E ED+ ER F
Sbjct: 258 NSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF- 314
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLS 371
Query: 370 KNKRPRLSMEVPPLDL 385
+ R + PP DL
Sbjct: 372 SSVSKRTKLCFPPSDL 387
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 236/392 (60%), Gaps = 38/392 (9%)
Query: 11 PSSNSDD---LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF- 66
PSSN + + +LW ACAGPLV +P G V YFPQGH EQ+ AS Q+ IP +
Sbjct: 10 PSSNEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKQTDFIPNYP 68
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 126
LPSK++C + ++ L A+ ETDEVYAQ+TL P N R F K
Sbjct: 69 NLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKLN-------------RQPTEFFCKT 115
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKDLH W F+HI+RG
Sbjct: 116 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG----- 170
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 246
WS FV++KRL AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+L
Sbjct: 171 -----WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGIL 225
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
A A+HA A + F +++ PR S+F++ L KY +A+ + ++GMR++M FE ED
Sbjct: 226 AAAAHANANSSPFTIFFNPR--ASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGV 283
Query: 307 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLV 364
RR+ GTV G+ D P WK S+WR+L+V WDE + RP RVS WEIEP + TP +
Sbjct: 284 RRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYIC 340
Query: 365 QPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 393
P + K PR M LD+ +A + PW
Sbjct: 341 PPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 372
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 934 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 992
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 993 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1023
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 211/359 (58%), Gaps = 64/359 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ IP + LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 77 VNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPR 117
++ + A+ ETDEVYAQ+TL P P + D C A+ S +
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+H
Sbjct: 148 P-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 237
IFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
S SMH+G+LA A+HA AT + F ++Y P
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNP-------------------------------- 294
Query: 298 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 355
R+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 295 ----------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 343
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 693 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 751
Query: 638 GDMMLVGDDPWHEFCNMVKRI 658
D++L+GDDPW EF N+ +
Sbjct: 752 NDVLLLGDDPW-EFINIYMNV 771
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 167/364 (45%), Positives = 228/364 (62%), Gaps = 24/364 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL------EASTNQELNQRIPLF-RLPSKIL 73
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDT 132
C + ++L A+ +TDEVYAQ+TL P + E RP++ F K LTASDT
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDT 163
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGW 223
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
S FV+ KRL AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA
Sbjct: 224 SLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHA 283
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSG 311
A + F ++Y PR ++F+I KY +A+ +N+ ++GMR++M FE E+ RR+ G
Sbjct: 284 AANSSPFTIFYNPR--ASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMG 341
Query: 312 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
T+ G+ D P V WDE A+ R +RVS WEIEP VA+ QP
Sbjct: 342 TITGISDLDP-----------VGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV- 388
Query: 372 KRPR 375
KRPR
Sbjct: 389 KRPR 392
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 448 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 880 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 931
Query: 507 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 932 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 983
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 984 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1042
Query: 623 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1092
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 195/270 (72%), Gaps = 9/270 (3%)
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD NQ P+QEL+AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K LV+GD +FLR ENGEL +G+R +RQQS +PSSV+SSQSMHLGVLA
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A++AV+T++MF ++Y PR ++FII KY+++ + ++GMR+KMRFE ED+ ERR
Sbjct: 121 AANAVSTKSMFHIFYNPR--ASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERR 178
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
++G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ + L P
Sbjct: 179 YTGIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVS--GLSIPS 236
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAPWSARL 397
++ KR R ++ P+D S P RL
Sbjct: 237 CSRIKRLRTNLPSTPVDF----SVPDGGRL 262
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 497 RKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGH--------IISTISAAADS 546
R + SC+LFGI LI A S +P + +G + S+I+ + D
Sbjct: 572 RDIQGKHSCKLFGISLIKEPACMDDAISSGIPPDGVAQDGSHATYGRGLVQSSIAQSQDQ 631
Query: 547 DGKSDI---AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
K + + K EQ + K S+ S RS TKV QG AVGRA+DL+ L
Sbjct: 632 LLKDSLDHPGRSACLKGSEQQMTTQKVSKGPTLVQASGRSCTKVHKQGNAVGRAVDLSKL 691
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
GYD LI ELE +F+++G L+ K W++VYTD E DMMLVGDDPW EFCN+V +I I +
Sbjct: 692 DGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDMMLVGDDPWQEFCNIVCKILIYT 751
Query: 663 SQDVKKMSPG 672
+++KK +PG
Sbjct: 752 HEELKKWTPG 761
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 207/345 (60%), Gaps = 22/345 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ N ++ LP + CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAA-AGGGNVAVD-------LPPHVACRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L+ E + + + +H F K LTA
Sbjct: 75 ELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLLAV 254
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + Y PR S++II +K+L+++N F +G R ++ ED ERR
Sbjct: 255 ADSLKHKSVFHISYNPRAT--ASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR- 311
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
SG VV V + P W SKWRSL V+W++ DRVSPWEIE
Sbjct: 312 SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 204/345 (59%), Gaps = 22/345 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA--------DLPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR
Sbjct: 255 ADSLKNRSVFHISYNPRAT--ASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR- 311
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 312 SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 204/345 (59%), Gaps = 22/345 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA--------DLPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR
Sbjct: 255 ADSLKNRSVFHISYNPRAT--ASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR- 311
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 312 SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 204/345 (59%), Gaps = 22/345 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR
Sbjct: 255 ADSLKNRSVFHISYNPR--ATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR- 311
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 312 SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 230/400 (57%), Gaps = 24/400 (6%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M L ++ + + + ELW ACAGP V +P++G V Y PQ H+ A+ +
Sbjct: 1 MGIDLNTVEEDGETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAHL----AAGGGDAP 56
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPC 111
+P + CRVV + L A+ TDEVYA++ L+ E +E +
Sbjct: 57 APAGRAHVPPHVACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMA 116
Query: 112 PADSP-RPKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
D +P++ H F K LTASDTSTHGGFSV R+ A +C LD Q P+QELVAKDLH
Sbjct: 117 AGDGENKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLH 176
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 229
G +WRF+HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++
Sbjct: 177 GTQWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRN 236
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKF 289
+++ L L+ + ++ +++F V + PR + S+FI+ ++ +++N+ F
Sbjct: 237 EALFEAVNTNDSKLHTLSAVASSLENRSIFHVCFDPR--SGASEFIVPYWRFSKSLNHTF 294
Query: 290 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 348
++GMR+K+ E +D+ ER +G + G+ + P W SKWR L V+WD+ RVS
Sbjct: 295 SIGMRFKVSNESDDANERS-TGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVS 353
Query: 349 PWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLP 386
PWEIE S + V L + +KR +L LD P
Sbjct: 354 PWEIERVGGSIS---VTDCLSASSSKRAKLYFPQGNLDAP 390
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/375 (40%), Positives = 220/375 (58%), Gaps = 20/375 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R+LW ACAGP+V +P++G V Y PQGH+ A + L P + CRVV++
Sbjct: 24 RDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVAL---PPHVACRVVDV 80
Query: 80 HLMAEQETDEV-----YAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L + V Y + TL + E D R +H F K LTASDTST
Sbjct: 81 ELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEERKSR-MLHMFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
HGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTGWS+
Sbjct: 140 HGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSS 199
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+ + ++
Sbjct: 200 FVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLK 259
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 314
++F + Y PR S++++ K++++ N+ +GMR+K FE ED ERR SG +
Sbjct: 260 HGSVFHICYNPR--ATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR-SGMIA 316
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 373
GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ + A + +
Sbjct: 317 GVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLSASSSK 374
Query: 374 -----PRLSMEVPPL 383
P+ +++VP L
Sbjct: 375 RTKLCPQGNLDVPAL 389
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 14/330 (4%)
Query: 87 TDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTH 135
TDEVYAQ++L+ E E C + P H F K LTASDTSTH
Sbjct: 40 TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 255
+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+ +HAVA
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 315
+++F +YY PR+ S+FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++G
Sbjct: 220 KSIFHIYYNPRL--SQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIG 277
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
+ P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 278 SREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKSC 336
Query: 376 LSMEVPPLDLPSAASAPWSARLAQSHNLTQ 405
P + LP+ + + A A+ H + Q
Sbjct: 337 FPQVNPDIVLPNGSVSSDFAESARFHKVLQ 366
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 198/336 (58%), Gaps = 42/336 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ
Sbjct: 93 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQ------------------------------ 122
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A+ ETDEVYAQ+TL +P E R V F K LTASDTSTHGGFSV
Sbjct: 123 --ADAETDEVYAQMTL--QPYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSV 178
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KR
Sbjct: 179 PRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKR 238
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
L AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F
Sbjct: 239 LFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFT 298
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 320
++Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 299 IFYNPR--ASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELR 356
Query: 321 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 356
+ K +P++ RP RVS WEIEP V
Sbjct: 357 CCAME------KFTMAQPSAGERPSRVSIWEIEPVV 386
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1056 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1114
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1115 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1145
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 234/711 (32%), Positives = 333/711 (46%), Gaps = 114/711 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW+ACAG +V +P V+YFPQGH E ++ N QRIP S ILCRV +
Sbjct: 12 QLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVN--FPQRIP-----SLILCRVATVK 64
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKVLTA 129
+A+ +TDEVYA+I +P P+ + D CP D P SF+K LT
Sbjct: 65 FLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCP-DKPA----SFAKTLTQ 119
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLLT 179
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------CLARQQSSMPSS-------- 234
TGWSTFV K+LVAGD+ VFLR ENG+L VG+R +R +SS+ +
Sbjct: 180 TGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNATC 239
Query: 235 ---------VISSQSMHLG------------VLATASHAVATQTMFVVYYKPRIITRTSQ 273
+ M G VL A A + VVYY PR + T +
Sbjct: 240 AIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYY-PR--SSTPE 296
Query: 274 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 331
F + + A+ + GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 297 FCVKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSPWRLL 356
Query: 332 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----L 385
+V WDEP + RVSPW +E + S P + + P K+ R ++ PLD L
Sbjct: 357 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKSRFPQQLGFPLDLQFQL 414
Query: 386 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 445
PS + P L S + LS ++ A H + S+ F ++ QS G +L
Sbjct: 415 PSFSGNP----LGPSSPMCCLS---DNTPAGIQGARHAQFGISLSDIQFNNKQQS-GMFL 466
Query: 446 TS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 500
+S P + S+ + N+NIS G+S P+ LE+ + +K +
Sbjct: 467 SSLQRFNPHSRNSETYLTGHTNSNENISCL-LTMGNSNPN---------LEKSDNVKKHQ 516
Query: 501 TGTSCRLFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
LFG I + H + S ++ VS + E + S+ SD+
Sbjct: 517 F----LLFGQPILIEQHISHSCSTDA--VSQVINERNSSDESSSKEK---ISDVLLSAPG 567
Query: 559 KKQEQVQ-----VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 613
KK QV+ S +S S + + KV ++ VG LDL+ L Y+ L +L
Sbjct: 568 KKISQVKSCGTGFSWHQSLHNTSEIGKDTGPCKVFLESEDVGWTLDLSALCSYEELHGKL 627
Query: 614 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
MF I+ + ++Y D G + +GD+P+ F KR+ I +Q
Sbjct: 628 ANMFGIE---RSEMSSHVLYRDATGSVKQIGDEPFSVFMKTAKRLTILMNQ 675
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 204/329 (62%), Gaps = 17/329 (5%)
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK 119
+I+CRVV++ L AE DE+YAQ++LL E S N R
Sbjct: 1 QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+
Sbjct: 61 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISS 238
RGQPRRHLLTTGWS+F K+L GD +FLR ++GEL +G+R RQ Q +P + +
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
Q + +L+ + A++ + +F +YY PR ++F++ KYL + ++ F++GMR K+R
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPR--ASPAEFMVPYWKYLRSCSHPFSMGMRLKIR 238
Query: 299 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
E ED+ E+R++G + GV D P W +SKWR L V+WD+ A DRVSPWEIE +
Sbjct: 239 VETEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--S 296
Query: 358 SATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
S + P+ + +KRP+++ D+P
Sbjct: 297 SLVSSFSFPLKSTSKRPKMNFPSIITDIP 325
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 498 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 555
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 566 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 617
Query: 556 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 618 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 671
Query: 616 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 672 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 723
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 221/378 (58%), Gaps = 21/378 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP V +P+QG + Y PQGH+ + P+ P + CRV+++
Sbjct: 26 ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAPPV---PPHVACRVLDVE 82
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKV-HSFSKVLTASD 131
L A+ TDEVYA++ L+ + + +P++ H F K LTASD
Sbjct: 83 LCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTASD 142
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
TSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTTG 202
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGV-RCLARQQSSMPSSVISSQSMHLGVLATAS 250
WS+FV K+LV+GD +FLRG +GEL +G+ R + + + +V SS S + A AS
Sbjct: 203 WSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQRTLSAVAS 262
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
+ ++ F V + PR + S+FI+ K+ +++N+ ++GMR+K+ +E ED+ ER +
Sbjct: 263 -SFRNRSTFHVCFDPR--SGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANERS-T 318
Query: 311 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 369
G + GV + P W SKWR L V+WD R+SPWEIE ++ + A
Sbjct: 319 GMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE--RVGGMNSVTHSLSA 376
Query: 370 KN-KRPRLSMEVPPLDLP 386
N KR +LS LD P
Sbjct: 377 SNSKRTKLSFPESNLDAP 394
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 223/378 (58%), Gaps = 20/378 (5%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGP V +P++G + Y PQ H L A +P + CRVV +
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVE 79
Query: 81 LMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEVYA++ L+ E ++ + C A+ H F K LTA
Sbjct: 80 LRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTA 139
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG +W+F+HI+RGQPRRHLLT
Sbjct: 140 SDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLT 199
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
GWS+FV K+LV+GD +FLRG++G+L +GVR + ++ ++S L +L++
Sbjct: 200 IGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSV 259
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + + PR + S+FI+ + L+++N+ F++GMR+++ +E ED+ ER
Sbjct: 260 ASSLENKSVFHICFNPR--SGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERS- 316
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+G + G+ + P W S+W+ L V+WD+ + +RVSPWEIE S + + +
Sbjct: 317 AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVS--VTHSLS 374
Query: 369 AKNKRPRLSMEVPPLDLP 386
+ +KR +L LD P
Sbjct: 375 SGSKRTKLHFPQGSLDTP 392
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 195/347 (56%), Gaps = 61/347 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ Q ++ LP + CR++++
Sbjct: 51 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ------QAPGFSAAIYGLPPHVFCRILDVK 104
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPC-----PADSPRPKV-------HSFSKVLT 128
L AE +TDEVYAQ++LLPE E + D +V H F K LT
Sbjct: 105 LHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMFCKTLT 164
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
ASDTSTHGGFSV R+ A +C PPLD ++ P+QEL+A+DLHG EWRF+HI+RGQPRRHLL
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQPRRHLL 224
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
TTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+ + +
Sbjct: 225 TTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNHNNFSE 284
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
+HA++T + F +YY P+ +
Sbjct: 285 VAHAISTNSAFNIYYNPKSL---------------------------------------- 304
Query: 309 FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 305 --GIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 220/359 (61%), Gaps = 37/359 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW+ACAGPLV++P G V YFPQGH EQ+ AS ++++ +IP + LPS++LC + N+
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 80 HLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGF
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD + P QELVAKDLH W F+HI+RG
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG----------------- 191
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 192 ------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 239
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F V+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 240 FTVFYNPR--ASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGIS 297
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 375
D P WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 298 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 354
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLV 643
KV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D++LV
Sbjct: 988 KVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 1046
Query: 644 GDDPWHEFCNMVKRIFICSSQDVKKMS 670
GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1047 GDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 214/378 (56%), Gaps = 74/378 (19%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P++G VYYFPQGH EQ+ A+T + N RIP + LPS++LC+V NI
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGG 137
L A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGG
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGG 157
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 158 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 217
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+KRL AGD+ +F+R + PS V+ A + AT
Sbjct: 218 AKRLKAGDSVLFIR------------------TSPSPF---------VIPVARYNKAT-- 248
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
Y +P +VGMR+ M FE E+S +RR++GTVVG+
Sbjct: 249 ----YMQP------------------------SVGMRFAMMFETEESSKRRYTGTVVGIS 280
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR- 373
D+ P W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N +
Sbjct: 281 DYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKR 334
Query: 374 ---PRLSMEVPPLDLPSA 388
P + VP L++ SA
Sbjct: 335 QCLPGYGVSVPGLEIGSA 352
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 797 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 855
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
++LVGDDPW EF N V+ I I S +V++M G +L
Sbjct: 856 VLLVGDDPWEEFINCVRCIRILSPSEVQQMRVGMQL 891
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 233/709 (32%), Positives = 331/709 (46%), Gaps = 120/709 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW+ACAG +V +P +V+YFPQGH E ++ + QRIP S +LCRV ++
Sbjct: 12 QLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPV--DFPQRIP-----SLVLCRVASVK 64
Query: 81 LMAEQETDEVYAQITLLPEP------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+A+ TDEV+A+I+L+P P SQ+ D +++ K SF+K LT SD +
Sbjct: 65 FLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAE-KPASFAKTLTQSDANN 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P LD + P Q L+AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG---------- 244
FV K+LVAGD+ VFLR ENG+L VG+R A++ + S SS S H+G
Sbjct: 184 FVNQKKLVAGDSIVFLRAENGDLCVGIR-RAKRGVGIGSGPESSPS-HIGWNSNNATSAN 241
Query: 245 -----------------------------VLATASHAVATQTMFVVYYKPRIITRTSQFI 275
VL A A VVYY PR T +F
Sbjct: 242 PYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYY-PR--ASTPEFC 298
Query: 276 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 333
+ + A+ + GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 299 VKASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPWRLLQV 358
Query: 334 QWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPS 387
WDEP + VSPW +E + S P + + P K+ R ++ PLD LPS
Sbjct: 359 TWDEPDLLQTVKCVSPWLVE--LVSNMPVIHLSPFSPPRKKLRFPQQLDFPLDGQFQLPS 416
Query: 388 AASAPWSARLAQSHNLTQLS-VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT 446
+ P L S L LS T + H + SDF F + QS G +L+
Sbjct: 417 FSGNP----LGPSSPLCCLSDNTPAGIQGARHAQFGISLSDF----QFKKKLQS-GLFLS 467
Query: 447 S-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 501
S PR K S+ D NKN+S G S P LE+ + +K +
Sbjct: 468 SLQRFNPRTKNSENYPTGHPDSNKNLSCL-LTKGSSNPK---------LEKSDNAKKHQF 517
Query: 502 GTSCRLFGIEL-----INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI---- 552
LFG + I+H+ S+ +V + S+ ++ + SD+
Sbjct: 518 ----LLFGQPILVEQQISHSCSADAFPQV----------VNERNSSDSNREKNSDVLRSA 563
Query: 553 -AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
K+ ++K S +S S + K ++ +GR LDL+ L Y+ L
Sbjct: 564 PGKQISQEKSCTTGFSWHQSLQNTSENGMDTGHCKAFLESEDLGRTLDLSALHSYEELRR 623
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+L MF I+ + ++Y D G + +GD+P+ F KR+ I
Sbjct: 624 KLAIMFGIE---RSDMLSHVLYRDVTGAVKQIGDEPFSVFMKTAKRLTI 669
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 212/368 (57%), Gaps = 58/368 (15%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTN--QELNQRIPLFRLPSKIL 73
D LY ELW+ACAG V VP++ + V YFPQGH+EQ+ A T Q+ + IP++ LPSKIL
Sbjct: 19 DSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYDLPSKIL 78
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTA 129
C++++I L AE +DEVYAQ+TL+P Q+ E D P+ + ++FSK+LT
Sbjct: 79 CKIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSIT---TTYTFSKILTP 135
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV +KHA EC PPLDM Q TP QE+VAKDL+G
Sbjct: 136 SDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNG------------------- 176
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS--SMPSSVISSQSMHLGVLA 247
E+GE+ VG+R S S SS+IS SM LG+LA
Sbjct: 177 ----------------------AESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGILA 214
Query: 248 TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 307
+ASHAV++ TMF+VYY P T +FI+ L YL++ + +GMR +M+ E E+S R
Sbjct: 215 SASHAVSSGTMFIVYYHP--WTNPFEFIVPLRTYLKSTVPDYPIGMRVQMQHEVEES-LR 271
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPFVASATPNLVQ 365
R +GT++G ED W S+WR LKVQWD P+RV PW IEP ++ V
Sbjct: 272 RHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQV- 330
Query: 366 PVLAKNKR 373
P L K+
Sbjct: 331 PALPTTKK 338
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 564 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 623
++V+P ++ K+ +NRS TKV G A+GRA+DL GY LI EL+ MF+ +G L
Sbjct: 514 MRVAPGKT-CKKCHRVNNRSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSL 572
Query: 624 -HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
+ + W + DD+GDMM +GD PW +F +V+++ IC + + P S
Sbjct: 573 INESSGWHVTCMDDDGDMMQLGDYPWQDFQGVVQKMIICPKEGTNNIKPSS 623
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 42/339 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPLV +P G V YFPQGH EQ ++I
Sbjct: 36 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQF-------------------------LDIK 70
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L D+ + L E + +P RP+ F K LTASDTSTHGGFSV
Sbjct: 71 LTVN--GDQYGKEALQLSELALKQP-----------RPQTEFFCKTLTASDTSTHGGFSV 117
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KR
Sbjct: 118 PRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKR 177
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
L+AGD+ +F+R E +L +G R RQ +++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 178 LLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFT 237
Query: 261 VYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 319
++Y PR ++F++ KY +A+ N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 238 IFYNPR--ASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDL 295
Query: 320 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
P WK+S+WR+++V WDE A+ R +RVS WEIEP A
Sbjct: 296 DPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPVAA 334
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 639
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 842 RTFTKVYKRG-AVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 900
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++L+GDDPW EF N VK I I S Q+V+++S
Sbjct: 901 ILLLGDDPWEEFVNCVKCIRILSPQEVQQIS 931
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 232/711 (32%), Positives = 327/711 (45%), Gaps = 121/711 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E ++ + R+PS +LCRV +
Sbjct: 11 QLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDFSS-------RIPSLVLCRVAGVK 63
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCP-------ADSPRPKVHSFSKVLTASDTS 133
+A+ ETDEVYA+I+L P PS NE D + K SF+K LT SD +
Sbjct: 64 YLADSETDEVYAKISLFPLPS-NELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQSDAN 122
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 123 NGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 182
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-------QSSMPSSVIS--------- 237
TFV K+LVAGD+ VFLR E+G+L VG+R R +SS PS +
Sbjct: 183 TFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASCVNPYT 242
Query: 238 -----------SQSMHLG-------------VLATASHAVATQTMFVVYYKPRIITRTSQ 273
S+ + G VL +A+ A Q VVYY PR T +
Sbjct: 243 GGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYY-PR--ASTPE 299
Query: 274 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 331
F + + + ++ GMR+KM FE EDS F GT+ V+ P W +S WR L
Sbjct: 300 FCVKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSPWRLL 359
Query: 332 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----L 385
+V WDEP + RVSPW +E + S P + + P K+ RL + PLD L
Sbjct: 360 QVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKLRLPQHLDFPLDGQFQL 417
Query: 386 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFS-SNSNFMSRTQSDG 442
PS + P L S L LS DN A +H+ F S S+ G
Sbjct: 418 PSFSGNP----LGPSSPLCCLS--------DNTPAGIQGARHAQFGISLSDLQLNKLQSG 465
Query: 443 EWLTS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 497
+L+S + S+ + + N+N+S G+S + K +N + V
Sbjct: 466 LFLSSLQRFNSHSRVSESFMKSNTNSNENLSCLLTM-GNSNTNSEKSDNVKRHQFV---- 520
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK 557
LFG ++ S VS ++S ++ +S K+ I
Sbjct: 521 ---------LFGQPILTEQQISRSCSTDAVS------QVLSKKLSSDESPEKAKIHDVLG 565
Query: 558 EKKQEQVQVSPKESQSK----QSCLTS----NRSRTKVQMQGVAVGRALDLTTLVGYDHL 609
++ Q SP++S S QS T+ + KV ++ VGR LDL+ L Y+ L
Sbjct: 566 STPEK--QTSPEKSASTGLSWQSLHTTETGLDAGHCKVFLESEDVGRTLDLSVLGSYEEL 623
Query: 610 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
L MF I+ + ++Y D G + GD+P+ F KR+ I
Sbjct: 624 YSRLANMFGIE---RSEMLHHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTI 671
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 203/305 (66%), Gaps = 15/305 (4%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS----- 122
LPSK++C + N+ L A+ ET+EVYAQ+TL P + D A K++
Sbjct: 354 LPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDR----DALLASDMGLKINRQPNEF 409
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HIFRGQ
Sbjct: 410 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQ 469
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS SMH
Sbjct: 470 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMH 529
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E
Sbjct: 530 IGVLAAAAHANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETE 587
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 588 ECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TP 644
Query: 362 NLVQP 366
+ P
Sbjct: 645 FYICP 649
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 132/189 (69%), Gaps = 6/189 (3%)
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 238
F GQP+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 239 QSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMI 231
Query: 299 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP +
Sbjct: 232 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL- 290
Query: 358 SATPNLVQP 366
TP + P
Sbjct: 291 --TPFYICP 297
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1347 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHEND 1405
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1406 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1436
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 17 DLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCR 75
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS Q+ IP + LPSK++C
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASM-QKQTDFIPSYPNLPSKLICM 78
Query: 76 VVNIHLMAEQETDEVYAQITLLP 98
+ N+ L A+ ET+EVYAQ+TL P
Sbjct: 79 LQNVTLNADPETEEVYAQMTLQP 101
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 213/396 (53%), Gaps = 89/396 (22%)
Query: 11 PSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS 70
PS++S L ELW ACAGP++ +PK+G V YFPQGH+E + Q+L +P +P
Sbjct: 36 PSASSVCL--ELWHACAGPMICLPKKGSVVVYFPQGHLELV-----QDLQLLLP--NIPP 86
Query: 71 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------- 120
+ CRVV++ L AE+ +DEVY Q+ L+PE Q + + +
Sbjct: 87 HVFCRVVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSST 146
Query: 121 -HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+
Sbjct: 147 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIY 206
Query: 180 RG--------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 231
RG QPRRHLLTTGWS FV K+LV+GD +FLR + E V +
Sbjct: 207 RGVSLMSHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRASSSEFIVPIH--------- 257
Query: 232 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAV 291
+F+ SL+ ++
Sbjct: 258 -----------------------------------------KFLKSLDY-------SYSA 269
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 350
GMR++MRFE +D+ ERR +G +VG+ D P W SKW+ L V+WD+ TR +RVSPW
Sbjct: 270 GMRFRMRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LEATRNNRVSPW 328
Query: 351 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
EIEP +++ PN + + A KR R+ + L+ P
Sbjct: 329 EIEPSGSASIPNNL--MAASLKRTRIGLPSTQLEFP 362
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 219/693 (31%), Positives = 308/693 (44%), Gaps = 86/693 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + S + F++P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVD------FGHFQIPALIPCKVS 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLT 128
I MAE ETDEVYA+I L P S ++ D C DS + K SF+K LT
Sbjct: 62 AIKYMAEPETDEVYAKIRLTPS-SNSDLMFGDGCGEDSDDRLPNGIESQEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSSVISSQSMHLG-- 244
TTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + SS +S + G
Sbjct: 181 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGYSGFL 240
Query: 245 ------------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNK 280
V+ AS A Q VVYY PR T +F + +
Sbjct: 241 REDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYY-PR--ASTPEFCVRASA 297
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 338
A++ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 298 VRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWDEP 357
Query: 339 ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARL 397
+ RVSPW +A N+ L+ PR + +P P D P P +
Sbjct: 358 DLLQNVKRVSPW-----LAELVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFT 412
Query: 398 AQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD--------GEWLTSPR 449
D H + SS+ ++ QS + SP
Sbjct: 413 GIPLRSNSPLCCVSDNIPAGIQGARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASPS 472
Query: 450 VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFG 509
+ S F ++NIS S +L E ET KT LFG
Sbjct: 473 -RISSGNFMGNTKKSENISCLLTMGNSS---------QSLKESSET--KTPHFV---LFG 517
Query: 510 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 569
++ SS ++ +++G++ A SDG ++ + + S
Sbjct: 518 QLIVTDQQSSQSCSGDTNANSSSDGNL-----GKASSDGSGSALQQNGPMENSSDERSTW 572
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 629
+++ L KV ++ +GR LDL+ L Y+ L +L MF I+ +
Sbjct: 573 YKDHQKTDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIE---SSEMLS 629
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
++Y D G GD+P+ EF +R+ I S
Sbjct: 630 NVLYRDAAGATKHAGDEPFSEFLKTARRLTILS 662
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 233/708 (32%), Positives = 320/708 (45%), Gaps = 106/708 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A TN + R+P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPKVHSFSKVLTASDT 132
+ MA+ ETDEVYA+I L+P + NE D +++P K SF+K LT SD
Sbjct: 63 AVKFMADPETDEVYAKIRLVPI-ANNELDCEDDGVMGSSGSEAPE-KPASFAKTLTQSDA 120
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 121 NNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGW 180
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS--------------- 237
STFV K+LVAGD+ VFLR ENG+L VG+R R + P S
Sbjct: 181 STFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFLR 240
Query: 238 ---SQSMHLG-----------------------VLATASHAVATQTMFVVYYKPRIITRT 271
S+ M G V+ A+ A Q VVYY PR T
Sbjct: 241 EDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYY-PR--AST 297
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 329
+F + + AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR
Sbjct: 298 PEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 357
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 384
L+V WDEP + RVSPW +E + S P + L+ PR + +P P D
Sbjct: 358 LLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPII---HLSPFSPPRKKLRIPQHPDFPFD 412
Query: 385 LPSAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 443
S+ S L S L L T + H + SD N+ S G
Sbjct: 413 GQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQS-----GL 467
Query: 444 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT---- 499
+ TS FQ D + I+ +G T H + NN+++ + G +
Sbjct: 468 FPTS---------FQR-FDQHSRIT-----NGIITAH--RKNNESISCLLTMGNSSQNLE 510
Query: 500 ----ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD--SDGKSDIA 553
E LFG ++ S VS + T S A SDG
Sbjct: 511 KSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTL 570
Query: 554 KEFKEKKQEQVQVSPKESQSKQSC-LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 612
++ K K + V Q Q+ + + KV M+ VGR+LDL+ L Y+ L
Sbjct: 571 EQ-KGKPENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTR 629
Query: 613 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
L MF I+ + T ++Y D G + GD+P+ +F KR+ I
Sbjct: 630 LANMFGIE---RSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTI 674
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 219/358 (61%), Gaps = 62/358 (17%)
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 392
V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS
Sbjct: 181 VHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNL 238
Query: 393 WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKF 452
WS+ L Q H Q +T++ W +SP
Sbjct: 239 WSSVLTQPHEFAQSCITSQ--------------------------------W-SSP---- 261
Query: 453 SQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGI 510
QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI
Sbjct: 262 -QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGI 317
Query: 511 ELINHATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 565
+L++ + + +AP + +S T + H SD KS+I+K +EKKQE +
Sbjct: 318 DLMSSSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAE 367
Query: 566 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 625
SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +
Sbjct: 368 GSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS 425
Query: 626 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 683
R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 426 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 483
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 120/154 (77%), Gaps = 11/154 (7%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-EL 59
MANR G LY ELWK CAGPLVDVP+ +RVYYFPQGHMEQLEAST Q +L
Sbjct: 36 MANRGGEY---------LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDL 86
Query: 60 NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRP 118
N PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP +PDP P + RP
Sbjct: 87 NTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRP 146
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 152
KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL
Sbjct: 147 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 180
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 229/727 (31%), Positives = 317/727 (43%), Gaps = 115/727 (15%)
Query: 5 LGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
LGS + L +LW ACAG +V +P +V+YFPQGH E AS + RIP
Sbjct: 5 LGSKEKSKEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIP 64
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSF 123
+ I CRV + MA+ E+DEVYA+ITL+P S+++ + K SF
Sbjct: 65 AY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASF 119
Query: 124 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 183
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG P
Sbjct: 120 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTP 179
Query: 184 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS------VIS 237
RRHLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R P S
Sbjct: 180 RRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGC 239
Query: 238 SQSMHLG--------------------------------------VLATASHAVATQTMF 259
+ M G V+ AV Q
Sbjct: 240 NYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFE 299
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVED 318
V+YY PR T +F + + A ++ GMR+KM FE EDS F GT+ V+
Sbjct: 300 VIYY-PR--ASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQV 356
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
P W DS WR L+V WDEP + RVSPW +E + S P++ L PR
Sbjct: 357 ADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPSI---HLTHFSPPRKK 411
Query: 378 MEVP-----PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 432
+ P PLD + S + S+ LS DN A
Sbjct: 412 LRFPQYPDFPLDAQFSMPTFSSNLVGPSNPFGCLS--------DNIPAGMQG-------- 455
Query: 433 NFMSRTQSDGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGH--STPHPSKPNNDTL 489
+R G L+ P KF LF + + P S S S N +L
Sbjct: 456 ---ARHAQYGLSLSDPHHNKFQSGLFPAPFPQLDHPATPPKASNDYVSRKRSSSENVSSL 512
Query: 490 L---EQVETGRKTET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 545
L + ET +K++ T LFG ++ S VS + I+ +
Sbjct: 513 LTIAQSTETSKKSDDRKTGFTLFGRSILTEQQMSQSCSGDTVSPV---------ITGNSS 563
Query: 546 SDGKSDIAKEFKEKKQEQVQVS--PKES--QSKQSCLTSNR--------SRTKVQMQGVA 593
S+G D F + + P+ S + Q+ ++R KV M+
Sbjct: 564 SEGNQDKMANFSDGSGSALHQHGLPEHSSCEGYQTYKVNHRETEPNLETGHCKVFMESED 623
Query: 594 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCN 653
VGR LDL+ L YD L +L +MF I+ + + ++Y D G + +GD+P+ +F
Sbjct: 624 VGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGDEPFSDFTK 680
Query: 654 MVKRIFI 660
KR+ I
Sbjct: 681 TAKRLTI 687
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 304/691 (43%), Gaps = 84/691 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + S F++P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSV------EFGHFQIPALIPCKVS 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLT 128
I MA+ ETDEVYA+I L+P + ++ C D+ + K SF+K LT
Sbjct: 62 AIKYMADPETDEVYAKIRLIPL-NNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLG--- 244
TTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + SS +S + + G
Sbjct: 181 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFR 240
Query: 245 -----------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
V+ AS A Q VYY PR T +F + +
Sbjct: 241 EDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYY-PR--ASTPEFCVKASAV 297
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 298 RSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPD 357
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARLA 398
+ RVSPW +E N+ L+ PR + +P P D P P +
Sbjct: 358 LLHNVKRVSPWLVE-----LVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTG 412
Query: 399 QSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-----DGEWL--TSPRVK 451
D H SS+ ++ Q+ D + L +P +
Sbjct: 413 NPLRSNSPLCCVSDNIPAGIQGARHAQFGLSSSDLHFNKLQAGLFPVDFQRLDRAAPPSR 472
Query: 452 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIE 511
S F ++++IS S Q G T+T LFG
Sbjct: 473 ISNSNFVGNTQNSESISCLLTMGNSS--------------QGMKGSDTKT-PHILLFGQL 517
Query: 512 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 571
++ SS ++ +++GH A SDG +++ + P
Sbjct: 518 IVTDQQSSQSCSGDTNANSSSDGH-----PGKAISDGSGSASQQNGPLENSSGGRCPWYK 572
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEI 631
+++ KV M+ VGR LDL+ L Y+ L +L MF I+ + +
Sbjct: 573 DYQKTDPGLETGHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIE---SSEMLSNV 629
Query: 632 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
+Y + G GD+P+ EF +R+ I S
Sbjct: 630 LYRNAAGATKHAGDEPFSEFLKTARRLTILS 660
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 214/704 (30%), Positives = 314/704 (44%), Gaps = 99/704 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E N ++P F + CRV +
Sbjct: 21 QLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPF-----VPCRVTAVK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A+ ETDEVYA++ L+P + + D + K SF+K LT SD + GGFSV
Sbjct: 76 YRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPASFAKTLTQSDANNGGGFSV 135
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 136 PRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 195
Query: 201 LVAGDTFVFLRGENGELHVGVR------CLARQQSS------------------------ 230
LVAGD+ VFLR ENG+L VG+R C + SS
Sbjct: 196 LVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSPFFREDD 255
Query: 231 ------------MPS-SVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIIS 277
PS S++ + ++ AS+ A + F V Y PR T +F +
Sbjct: 256 NRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPR--ASTPEFCVK 313
Query: 278 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 335
+ A+ ++ G+R+KM FE EDS F GT+ + P +W +S WR L+V W
Sbjct: 314 ASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNSPWRLLQVTW 373
Query: 336 DEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPWS 394
DEP + RVSPW +E + S P + P K+ RL + D P P S
Sbjct: 374 DEPDLLQNVRRVSPWLVE--LVSNMPAIHFSPFSPPRKKLRLPQQP---DFPLDGQIPLS 428
Query: 395 ---ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK 451
+ L N Q E A H H S + +S+ QS
Sbjct: 429 TFPSNLLGPSNTNQFGCLLESTPAGMQGA-RHAHYGLSLSDLHLSKLQSG---------- 477
Query: 452 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND-------TLLEQVETGRKTETGT- 503
LF + + +A P +S KPN T+ ++ +K + G
Sbjct: 478 ----LFSTGF-PSLDHAATPMRVSNSITL-QKPNLSENVSCLLTMANSTQSSKKLDVGKT 531
Query: 504 -SCRLFGIELINHATSSAPSEKVPVSSLTT-----EGHIISTISAAADSDGKSDIAKEFK 557
S LFG +++ S S +S + T +G+ + ++ +D G + + +
Sbjct: 532 PSLVLFGQKILTEQQISPSSSGDTLSPVLTRNCSSDGN-VDKVTNFSDGSGSALHQEGLR 590
Query: 558 EKKQ-EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 616
E E+ Q Q ++ L KV M+ VGR +DL+ L YD L +L +M
Sbjct: 591 EHSSCERFQWCKDNHQETEAGL--EIGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADM 648
Query: 617 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
F I+ + ++Y D G + + D+ + +F KR+ I
Sbjct: 649 FGIE---KSEMLSHVLYRDSTGAVKRISDESFSDFTRTAKRLTI 689
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 141/167 (84%)
Query: 15 SDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILC 74
+D LY+ELW ACAGPLV+VP++ +RVYYFPQGHMEQLEAS +Q L+Q++P F LPSKILC
Sbjct: 16 NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILC 75
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTST
Sbjct: 76 KVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTST 135
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
HGGFSVLR+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRG
Sbjct: 136 HGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 192/301 (63%), Gaps = 12/301 (3%)
Query: 83 AEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGGF
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 62
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 63 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 122
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 123 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 182
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+
Sbjct: 183 FTIYYNPR--ASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 240
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 375
D P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPR
Sbjct: 241 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPR 297
Query: 376 L 376
L
Sbjct: 298 L 298
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 639
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 913 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1001
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 189/323 (58%), Gaps = 22/323 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RELW ACAGP+V +P++G V Y PQGH+ LP ++CRV ++
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 80 HLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
L A+ TDEV A++ L+ E + A+ +H F K LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 249
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 250 SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 309
+ ++ +++F + Y PR S++II K+L+++N+ +G R + ED ERR
Sbjct: 255 ADSLKNRSVFHISYNPR--ATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR- 311
Query: 310 SGTVVGVEDFSP-HWKDSKWRSL 331
SG VV + + P W SKWRSL
Sbjct: 312 SGVVVRISEIDPMKWPGSKWRSL 334
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 216/354 (61%), Gaps = 62/354 (17%)
Query: 337 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 396
EPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+
Sbjct: 1 EPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSV 58
Query: 397 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL 456
L Q H Q +T++ W +SP QQ
Sbjct: 59 LTQPHEFAQSCITSQ--------------------------------W-SSP-----QQC 80
Query: 457 FQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELIN 514
++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++
Sbjct: 81 HRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMS 137
Query: 515 HATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 569
+ + +AP + +S T + H SD KS+I+K +EKKQE + SPK
Sbjct: 138 SSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAEGSPK 187
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 629
E QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +W
Sbjct: 188 EVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQW 245
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 683
EIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 246 EIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 299
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 193/297 (64%), Gaps = 7/297 (2%)
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFS 139
+ A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFS
Sbjct: 1 MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 61 VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 259
RLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180
Query: 260 VVYYKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
+++ PR S+F+I L KY++AV + + +VGMR++M FE E+ + +
Sbjct: 181 TIFFNPR--ASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVT 238
Query: 319 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
+ P W++S WRS+KV WDE + R +VS WEIEP + P P + KRP
Sbjct: 239 WIPVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPL--TTFPMYPSPFPLRLKRP 293
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 682 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 740
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 741 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 771
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 221/711 (31%), Positives = 308/711 (43%), Gaps = 123/711 (17%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
LW ACAG +V +P +V+YFPQGH E + + +IP F I C+V I
Sbjct: 18 LWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRVYPKIPPF-----IQCKVGAIKY 72
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPC----PADSPRPKVHSFSKVLTASDTSTHGG 137
MA+ ETDEVY ++ L+P ++NE D + K SF+K LT SD + GG
Sbjct: 73 MADPETDEVYVKLRLVPL-TRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSDANNGGG 131
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 132 FSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSSFVN 191
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQS------------------SMPSSVIS-- 237
K+LVAGD+ VFLR E +L VG+R R MP S
Sbjct: 192 HKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMPYGGFSAF 251
Query: 238 -----SQSMHLG-------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLN 279
SQ + G V+ A+ A Q VVYY PR +F + N
Sbjct: 252 LREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYY-PR--ASAPEFCVKAN 308
Query: 280 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEP 338
A+ ++ GMR+KM FE EDS F GT+ V P W +S WR L+V WDEP
Sbjct: 309 LVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADPRWPNSPWRLLQVTWDEP 368
Query: 339 ASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPW--SA 395
+ RVSPW +E + S P + + + K+PR P S P S
Sbjct: 369 ELLQNVKRVSPWLVE--IVSNMPTIHLSHYSTQQKKPRFPQH-PDFSFDGQISLPAFPSN 425
Query: 396 RLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQ 455
L S+ L AE A H + SN +F K
Sbjct: 426 FLGPSNPFGCL---AESTPAGIQGARHANYGISLSNLHFN---------------KLQSG 467
Query: 456 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 515
LFQ P S NN +++V TG SC L++
Sbjct: 468 LFQAGFP--------PLDHTASPVLRVSSNNAATMQKVGTGDN----VSC------LLSM 509
Query: 516 ATSSAPSEKVP----------VSSLTTEGHIISTISAAADS------DGKSDIAKEFKE- 558
+T++ PS+KV ++ TE I SA D DG +D +F +
Sbjct: 510 STATQPSKKVDDVKAPQLVLFGQTILTEQQISLNTSAKTDPTRNNSFDGNADKMCKFSDG 569
Query: 559 -------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 611
+ ++ + Q K++ + KV M+ +GR +DLT L YD L
Sbjct: 570 FGYALHPQGSSLERLQWYKDQQKETMASLETGHCKVFMESEDIGRTMDLTMLGSYDELYR 629
Query: 612 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 660
+L +MF I+ + ++Y D G + +GD+ + EF +R+ I
Sbjct: 630 KLADMFGIEKSVVLS---HMLYRDTTGAVKHIGDEAFSCSEFTKTARRLTI 677
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 307/719 (42%), Gaps = 122/719 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR---LPSKILCRVV 77
+LW ACAG +V +P RVYYFPQGH E + + LP+ +LC V
Sbjct: 32 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLLPALVLCSVA 91
Query: 78 NIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ +A+ ETDEV+A+I L+P E + EP P A++ + K+ SF+K LT SD +
Sbjct: 92 GVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEA-QEKLASFAKTLTQSDAN 150
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 151 NGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 210
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG--------- 244
TFV K+LVAGD+ VFLR E+GEL VG+R R V + G
Sbjct: 211 TFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGYGGFSAFLKDE 270
Query: 245 ----------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYL 282
V+ AS A Q VVYY PR T +F++
Sbjct: 271 ENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYY-PR--ASTPEFVVKAASMQ 327
Query: 283 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 340
A+ + GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 328 AAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVSWDEPDL 387
Query: 341 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS 400
+ VSPW +E V+S P + P K+ L +P P+ L
Sbjct: 388 LQNVKCVSPWLVE-LVSSIPPIHLGPFSPPRKK---------LRVPQHPDFPFDGHLFNP 437
Query: 401 -HNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQLFQ 458
+ L + R + D S +R G LT ++ K LFQ
Sbjct: 438 IFHGNPLGPSNSSLRC---------YPDNSPAGIQGARHAQFGLPLTDHQLNKLHLGLFQ 488
Query: 459 EA-------------IDDNKNISAWPAHSGHS------TPHPSKPNNDTLLEQVETGRKT 499
I IS+ PAH S TP ++ ++D RKT
Sbjct: 489 GGGFNRLDALTPSSRIPKGCMISSAPAHDSVSCLLTIGTPQSTEKSDD---------RKT 539
Query: 500 ETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEF 556
LFG ++ TSS + + + + A SDG S I F
Sbjct: 540 ---PHIMLFGKAILTEQQMTSSGSRDTLSSGATANSSPYGNAPKAGNTSDGSGSSICIGF 596
Query: 557 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 616
+ E + K V M+ VGR +DL+ V Y+ L L +M
Sbjct: 597 SSQGHESSDFGLEAGHCK------------VFMESEDVGRTIDLSDFVSYEELYGRLADM 644
Query: 617 FDIKGQLHTRTKWEIV----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
F I+ K EI+ Y D G +M G+ P+ +F + +R+ I S + P
Sbjct: 645 FGIE-------KEEIISHLRYRDTAGTVMHTGELPFSDFMKVARRLTIISGDSGRLPKP 696
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 212/411 (51%), Gaps = 62/411 (15%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S L +LW ACAG +V +P G +V YFPQGH EQ AST + +P +P
Sbjct: 21 GSEVGGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQ-AASTPEFPRTLVPNGSVP-- 77
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
CRVV+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD
Sbjct: 78 --CRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSD 135
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 136 ANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTG 195
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG------- 244
WSTFV K+LVAGD VFLR +GEL VGVR R S+ SS S +G
Sbjct: 196 WSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALN 255
Query: 245 ---------------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIIS 277
VL A+ AV+ + VVYY PR T++F +
Sbjct: 256 SSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYY-PR--ASTAEFCVK 312
Query: 278 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 335
A+ + GMR+KM FE EDS F GT+ V+ P W S WR L+V W
Sbjct: 313 AGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTW 372
Query: 336 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
DEP + +RVSPW++E VA+ L M++PP+ LP
Sbjct: 373 DEPDLLQGVNRVSPWQLE-LVAT-----------------LPMQLPPVSLP 405
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 222/720 (30%), Positives = 310/720 (43%), Gaps = 129/720 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + P R+P+ ILCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDF---RNCP--RVPAHILCRVAAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLT 128
MA+ TDEVYA+I L+P N TPD K SF+K LT
Sbjct: 76 FMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPD---------KPASFAKTLT 126
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 186
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ----------------QSSMP 232
TTG STFV K+LV+GD+ VFLR ENG+L VG+R R ++P
Sbjct: 187 TTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVP 246
Query: 233 SSVIS--------------------SQSMHLG--------VLATASHAVATQTMFVVYYK 264
S S +G V A+ A Q VVYY
Sbjct: 247 YGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYY- 305
Query: 265 PRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-H 322
PR T +F + + A+ ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 306 PR--ASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLR 363
Query: 323 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 382
W +S WR L+V WDEP + RVSPW +E + S P + L PR M +P
Sbjct: 364 WPESPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLTPFSPPRKKMRLPQ 418
Query: 383 L-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 441
D P P + DK H H S + +++ +
Sbjct: 419 HPDFPFEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHLNKLHTG 478
Query: 442 GEWLTSPRV-------KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 494
P + KFS + ++N+S S HST KP++ + +
Sbjct: 479 LFPAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLTMS-HSTQTSKKPDDVKPPQLI- 536
Query: 495 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIA 553
LFG ++ SL++ G +S ++ + SDG +D
Sbjct: 537 ------------LFGQPILTEQQ----------ISLSSSGDTVSPVLTGNSSSDGNADKM 574
Query: 554 KEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRT---------KVQMQGVAVGRALDLTT 602
+ +Q S +E S + NR T KV M+ VGR LDL+
Sbjct: 575 ANHSDNSGSALQQSIQERSSCEGFQWYKDNRHETEPHLETGHCKVFMESEDVGRTLDLSL 634
Query: 603 LVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 660
L YD L +L +MF I ++ T ++Y D G + VGD+P+ +F +R+ I
Sbjct: 635 LGSYDELYRKLADMFGID---NSETLNHVLYRDGTGAVKHVGDEPFSCSDFMKTARRLTI 691
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 213/704 (30%), Positives = 311/704 (44%), Gaps = 90/704 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E A +L LP +LC V +
Sbjct: 14 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAGAR--PLPPLVLCAVTGVR 71
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTA 129
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT
Sbjct: 72 FLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADA-REKLSSFAKTLTQ 130
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLT 190
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA-- 247
TGWSTFV K+LVAGD+ VFLR E+GEL VG+R R + + G L+
Sbjct: 191 TGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPGYGALSAF 250
Query: 248 -----------------------------TASHAVATQTMFVVYYKPRIITRTSQFIISL 278
AS A + Q VVYY PR T +F++
Sbjct: 251 LKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYY-PR--ASTPEFVVKA 307
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 336
A+ N++ GMR+KM FE EDS F GT+ + P W +S WR L+V WD
Sbjct: 308 ASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVTWD 367
Query: 337 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 396
EP + V+PW +E V+S P + P K+ L +P P+ +
Sbjct: 368 EPDLLQNVKCVNPWLVE-IVSSIPPIHLGPFSPPRKK---------LRMPQHPDFPFDGQ 417
Query: 397 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQ 455
L L+ + + SD + +R G LT ++ K
Sbjct: 418 L--------LNPIFHGNPLGPSNSALRCFSDIAPAGIQGARHAQFGLPLTDHQLSKLHLG 469
Query: 456 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LEQVETGRKTETGTSCR-----LF 508
LFQ + + P+H S P N+++ L + T + TE + LF
Sbjct: 470 LFQGGGFNRFDAITPPSHISKGFVISSAPVNESVSCLLTIGTPQATEKSDDRKKPHIMLF 529
Query: 509 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 568
G ++ ++ + S ++ + SDG + + +
Sbjct: 530 GKPILTEQQMNSRGSRETFS---------PEVTGNSSSDGNVQKTGNVSDGSGSSICIGF 580
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRT 627
+ S L KV M+ VGR +DL+ Y+ L +L +MF I K ++ +
Sbjct: 581 SSQGHEASELGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMS-- 638
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ Y D G + G++P+ +F + +R+ I S + + P
Sbjct: 639 --HLCYRDAAGAVKHTGEEPFSDFMKVARRLTIIESTEGRLQKP 680
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/715 (29%), Positives = 301/715 (42%), Gaps = 128/715 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 71
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHG 136
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + G
Sbjct: 72 YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGG 130
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 131 GFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFV 190
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV----- 245
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 191 NKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLR 250
Query: 246 -------------------------LATASHAVATQTMFVVYYKPRIITRTSQFIISLNK 280
+A A+ A FV+ Y PR T +F + +
Sbjct: 251 EDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPR--ASTPEFCVKASS 308
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 338
A+ ++ GM++KM FE +DS F G + V P W +S WR L+V WDEP
Sbjct: 309 VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEP 368
Query: 339 ASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAA 389
+ RV+PW +E + S P++ + P K+ RL ++P S A
Sbjct: 369 DLLQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNA 426
Query: 390 SAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR 449
P S S N+ A H + SD N
Sbjct: 427 LRPSSPLCCISDNIPAGIQGAR------HAQFGLSSSDLHFN------------------ 462
Query: 450 VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--- 506
K LF + + +A P+ + NN+ + + G T+
Sbjct: 463 -KLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIK 521
Query: 507 -----LFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 559
LFG I + + S + +SS SDG + F +
Sbjct: 522 APYFFLFGQPILIEQQVSQSCSGDTAGISS----------------SDGNPEKTPNFSDG 565
Query: 560 KQEQV-QVSPKESQSKQSCLTSNR-----------SRTKVQMQGVAVGRALDLTTLVGYD 607
Q P+ES S + LT + KV M+ VGR LDL+ L Y+
Sbjct: 566 SGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYE 625
Query: 608 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
L +L MF I+ ++Y D+ G + +GD P+ EF +R+ I +
Sbjct: 626 ELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTARRLTILA 677
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 215/696 (30%), Positives = 311/696 (44%), Gaps = 103/696 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEV+A++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
+ +S+ S S + V+ A+ A++ + VVYY PR TS+F +
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY-PR--ASTSEFCVKALDA 309
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSA 388
+ RV+PW +E V++ V P+ L PR M +P + +PS
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF 423
Query: 389 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP 448
S P S L + V + R + H + SD + +++R P
Sbjct: 424 PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPP----PPPP 477
Query: 449 RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLF 508
D KN + + +TP NDT ++ + LF
Sbjct: 478 SSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLF 522
Query: 509 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 568
G ++ P E++ T +I T ++ S+ +EF + SP
Sbjct: 523 GKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SP 571
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
S+ KV M+ VGR LDL+ L Y+ L +L +MF IK +
Sbjct: 572 C-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEML 627
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
++Y D G + G++P+ EF +R+ I + Q
Sbjct: 628 SSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 194/357 (54%), Gaps = 12/357 (3%)
Query: 1 MANRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
M LGS + L +LW ACAG +V +P +V+YFPQGH E AS +
Sbjct: 1 MIPFLGSKEKSKEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNY 60
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK 119
RIP + I CRV + MA+ E+DEVYA+ITL+P S+++ + K
Sbjct: 61 PRIPAY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEK 115
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+
Sbjct: 116 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIY 175
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RG PRRHLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R S
Sbjct: 176 RGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRV 235
Query: 240 SMHL-GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR 298
+ V+ AV Q V+YY PR T +F + + A ++ GMR+KM
Sbjct: 236 KVTAEAVIEAVRLAVNGQPFEVIYY-PR--ASTPEFCVKSSLVKSASQIRWCSGMRFKMA 292
Query: 299 FEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
FE EDS F GT+ V+ P W DS WR L+V WDEP + RVSPW +E
Sbjct: 293 FETEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 349
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ L YD L +L +MF I+ + + ++Y D G + +GD
Sbjct: 495 KVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGD 551
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 552 EPFSDFTKTAKRLTI 566
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 218/727 (29%), Positives = 310/727 (42%), Gaps = 124/727 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + +P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGPVVD-----LPAGRVPALVLCRVAAVR 77
Query: 81 LMAEQETDEVYAQITLLPEPSQNEP---------TTPDPCPADSPRPKVHSFSKVLTASD 131
MA+ +TDEV+A+I L P NEP + K SF+K LT SD
Sbjct: 78 FMADPDTDEVFAKIRLAPV-RPNEPGYAADADDAIGAAAAGGGAQEDKPASFAKTLTQSD 136
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 137 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTG 196
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP------------------- 232
WSTFV K+LVAGD+ VF+R ENG+L VG+R + P
Sbjct: 197 WSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPPGGGGYAG 256
Query: 233 ------------SSVISSQSMHLG-----------VLATASHAVATQTMFVVYYKPRIIT 269
S ++++ + G V+ A+ AV+ Q VVYY PR
Sbjct: 257 FSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVYY-PR--A 313
Query: 270 RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 327
T +F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S
Sbjct: 314 STPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 373
Query: 328 WRSLKVQWDEPASITRPDRVSPWEIE-----PFVASATPNLVQP--VLAKNKRPRLSMEV 380
WR L+V WDEP + RVSPW +E P + TP P L P L +E
Sbjct: 374 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPPRKKLCVPLYPELPLEG 433
Query: 381 PPLDLPSAASAPWSARLA-------------QSHNLTQLSVTAEDKRIDNHVAWHHKHSD 427
P +P + Q Q ++ D +D + H
Sbjct: 434 HQFPAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLDKLQSSLSPHG- 492
Query: 428 FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND 487
+ Q DG + PR+ + A + +IS +TP KP++D
Sbjct: 493 -------LHHHQLDGHGV-QPRIAAGLIIGHPAAARD-DISCLLTIG--TTPQNRKPSSD 541
Query: 488 TLLEQVETGRKTETGTSCRLFG--------IELINHATSSAPSEKVPVSSLTTEGHIIST 539
+ LFG I L N A AP +K P + T
Sbjct: 542 -------VKKAAAAAPQLMLFGKPILTEQQISLGNVAGFPAP-KKSPSDDVAER-----T 588
Query: 540 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 599
+S +SD S + + S ++++ L + + +Q + V GR LD
Sbjct: 589 VS---NSDVSSPGSNHGGSSRSSGGAPSCQDNKVPDLGLETGHCKVFMQSEDV--GRTLD 643
Query: 600 LTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDD-EGDMMLVGDDPWHEFCNMVKRI 658
L+ + Y+ L L +MF I T + Y DD G + GD P+ EF +R+
Sbjct: 644 LSAVGSYEELYQRLADMFGID---KTELMSHVFYRDDASGALKHTGDKPFSEFTKTARRL 700
Query: 659 FICSSQD 665
I + +
Sbjct: 701 TILTDAE 707
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 251/469 (53%), Gaps = 60/469 (12%)
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
GVLA+ASHA+ T ++FVVYY+PR+ SQ+I+S+NKY A F VGMR++M FE E
Sbjct: 1 FGVLASASHAIKTNSIFVVYYRPRL--SQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAE 58
Query: 303 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--A 359
D P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 59 DVPVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPA 118
Query: 360 TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDN 417
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 119 ISTLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISG 174
Query: 418 ----HVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQE 459
+ W +H+ + + +S+ + +T DG W SP + + +Q+L +
Sbjct: 175 SGYHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRV 233
Query: 460 AIDDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTS 504
A + + W G+ P+ P L EQV + K +
Sbjct: 234 ASSEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGM 293
Query: 505 CRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
RLFG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 294 VRLFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE---- 349
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 350 ----SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK-- 401
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 402 -DIKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 449
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/270 (45%), Positives = 179/270 (66%), Gaps = 11/270 (4%)
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+
Sbjct: 8 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIY 67
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S
Sbjct: 68 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSN 127
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
S + L+ ++++ +++F + Y PR S+FII K+L+++N F +GMR+K+++
Sbjct: 128 SSKIHTLSAVANSLKHRSVFHICYNPR--AAASEFIIPYWKFLKSLNRPFCIGMRFKIQY 185
Query: 300 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
ED ERR SG + G+ D P W SKW+SL V+W++ +R+SPWEIE +
Sbjct: 186 GSEDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE--IVG 242
Query: 359 ATPNLVQPVLAKNKR-----PRLSMEVPPL 383
+ ++ Q + A + + P+ +++VP L
Sbjct: 243 GSVSIAQSLSASSSKRTKLCPQGNVDVPTL 272
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 205/393 (52%), Gaps = 45/393 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + G
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGG 128
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 129 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 188
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA--------- 247
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 189 NQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGK 248
Query: 248 ----------------------TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
AS A + Q VVYY PR T +F++ A+
Sbjct: 249 MMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PR--ASTPEFVVKAASVQNAM 305
Query: 286 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 343
N++ GMR+KM FE EDS F GT+ + P W +S WR L+V WDEP +
Sbjct: 306 RNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWDEPDLLQN 365
Query: 344 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
V+PW +E V+S P + P K+ R+
Sbjct: 366 VKCVNPWLVE-IVSSIPPIHLGPFSPPRKKLRV 397
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
KV ++ VGR +DL+ Y+ L +L +MF I+ + Y D G + G
Sbjct: 592 CKVFVESEDVGRTIDLSVFGSYEELYGQLADMFGIE---KAEVMSHLCYRDAAGAVKRTG 648
Query: 645 DDPWHEFCNMVKRIFICSSQDVKKMSP 671
D+P+ +F + +R+ I S + + P
Sbjct: 649 DEPFCDFMKVARRLTIVESTEGRLQKP 675
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 207/402 (51%), Gaps = 38/402 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C------------- 223
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 224 ------LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIIS 277
L R +S ++ + L A+ F V Y PR T +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPR--ASTPEFCVR 297
Query: 278 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 335
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V W
Sbjct: 298 AAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTW 357
Query: 336 DEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 376
DEP + RVSPW +E + S+ P + + K+PR+
Sbjct: 358 DEPDLLQNVKRVSPWLVE--LVSSMPAINLSSFSPPRKKPRI 397
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 208/403 (51%), Gaps = 40/403 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---------------- 226
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R R
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 227 --QQSSMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYYKPRIITRTSQFII 276
Q + S + G V+ A A Q VVYY PR T +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYY-PR--ASTPEFCV 296
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V
Sbjct: 297 RAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVT 356
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 376
WDEP + RVSPW +E + S+ P + + K+PR+
Sbjct: 357 WDEPDLLQNVKRVSPWLVE--LVSSMPAIHLSSFSPPRKKPRI 397
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 216/706 (30%), Positives = 306/706 (43%), Gaps = 105/706 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV+YFPQGH E A + + P ++PS LCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDF---RNCP--KVPSYTLCRVSAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGF
Sbjct: 76 FLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGF 135
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 136 SVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNH 195
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI---------------------- 236
K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 196 KKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRE 255
Query: 237 -------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRIITRTSQFII 276
S+ M+ +G V A A Q +++Y PR T +F +
Sbjct: 256 DDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PR--ASTPEFCV 312
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V
Sbjct: 313 KAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVT 372
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWS 394
WDEP + RVSPW +E V+S +P + P K+ R D P P
Sbjct: 373 WDEPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVP 428
Query: 395 ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR----- 449
+ + H D H H S + +S+ QS G + R
Sbjct: 429 SFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPA 487
Query: 450 ---VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
+ S + E ++N+S + HST K + V+T +
Sbjct: 488 AGSTRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKK------FDGVKTPQLI------- 533
Query: 507 LFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-- 564
LFG ++ S VS + T + SDG D + +
Sbjct: 534 LFGRPILTELQMSQSFSGDTVSPVGT---------GNSSSDGNGDKMTNLSDGSGSALHQ 584
Query: 565 QVSPKESQS------KQSCL----TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
Q P+ S K +C + KV M+ VGR LDL++L Y+ L +L
Sbjct: 585 QGLPEGSAGENFQWYKDNCQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLG 644
Query: 615 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
MF I ++ T ++Y D G + VGD+ + +F +R+ I
Sbjct: 645 NMFGID---NSETLNHVLYRDVSGAVKHVGDEQFSDFIKTARRLTI 687
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 206/405 (50%), Gaps = 38/405 (9%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLE--ASTNQELN 60
G L+ P+ + + R+LW ACAG + VP G VYYFPQGH E A+ +
Sbjct: 4 FGDLTDPAPGGAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEHALGLAAAGPGVG 63
Query: 61 QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV 120
L R+P+ + CRV + MA+ +TDEV+A I L+P + D K
Sbjct: 64 G---LSRVPALLPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKP 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
SF+K LT SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+R
Sbjct: 121 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPS-- 233
G PRRHLLTTGWS FV K+LVAGD+ VFLRG+ G+LHVG+R R ++ S+P
Sbjct: 181 GTPRRHLLTTGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWE 240
Query: 234 --SVISSQSMHLGV------------------LATASHAVATQTMFVVYYKPRIITRTSQ 273
+ + M G +A A+ + F V Y PR T +
Sbjct: 241 NQQLYTMGPMRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPR--ASTPE 298
Query: 274 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 331
F + A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L
Sbjct: 299 FCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLL 358
Query: 332 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
+V WDEP + RVSPW +E + +L K+PR+
Sbjct: 359 QVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASSFSPPRKKPRI 403
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 209/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + RVSPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 175/266 (65%), Gaps = 7/266 (2%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+R
Sbjct: 33 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 92
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 240
GQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++
Sbjct: 93 GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTD 152
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
L +L+ ++++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E
Sbjct: 153 SKLLMLSAVANSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYHFSVGTRFKVGCE 210
Query: 301 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
ED+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S
Sbjct: 211 NEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSV 269
Query: 360 TPNLVQPVLAKNKRPRLSMEVPPLDL 385
+ V L+ + R + PP DL
Sbjct: 270 S---VTHRLSSSVSKRTKLCFPPSDL 292
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 209/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + RVSPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/395 (40%), Positives = 212/395 (53%), Gaps = 53/395 (13%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK-ILC 74
D L +LW ACAG +V +P+ G +V YFPQGH EQ A+T + + + PS I C
Sbjct: 10 DRLDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQ--AATTPDFSASMG----PSGTIPC 63
Query: 75 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
RVV+++ +A+ ETDEV+A++ L PE + P+ P K SF+K LT SD +
Sbjct: 64 RVVSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPASFAKTLTQSDANN 123
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A PPLD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWST 183
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHLGVLATAS 250
FV K+LVAGD VFLR +GEL VGVR R SS S+S G T+S
Sbjct: 184 FVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQGASTTSS 243
Query: 251 HA-----VATQTM------------FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGM 293
A V +++ F V Y PR T++F + +A+++ + GM
Sbjct: 244 FARNRARVTAKSVLDAAALAVAGKPFEVVYYPR--ASTAEFCVKAGLVKQALDHTWYAGM 301
Query: 294 RYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 351
R+KM FE EDS F GT+ V+ P W +S WR V WDEP + RVSPW+
Sbjct: 302 RFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSPWQ 358
Query: 352 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
+E VA+ L M++PP P
Sbjct: 359 VE-LVAT-----------------LPMQLPPFSYP 375
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 637
L+ KV +G VGR LDL Y+ + D L MF + K +VY D E
Sbjct: 514 LSIGTEHCKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPA---ASFKNRVVYQDGE 570
Query: 638 GDMMLVGDDPWHEFCNMVKRIFI 660
G + VG +P+ F V+R+ I
Sbjct: 571 GCTLPVGAEPYGNFVAAVRRLTI 593
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 209/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + RVSPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 595 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 652
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 653 EPFSDFMRATKRLTIKMDISGDNVRK 678
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 209/408 (51%), Gaps = 51/408 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E EL + LP+ +LC V +
Sbjct: 34 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRPLPALVLCCVAGVR 93
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSP--RPKVHSFSKVLTASDTST 134
+A+ +TDEV+A+I L+P E EP P +D P R K+ SF+K LT SD +
Sbjct: 94 FLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFAKTLTQSDANN 153
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 154 GGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 213
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVR-----------CLA------------------ 225
FV K+LVAGD+ VFLR E+GEL VG+R C++
Sbjct: 214 FVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYGGFSAFLKDEE 273
Query: 226 -RQQSSMPSSVISSQS-MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
+ + P+ + + + + + A+ A F V Y PR T +F++
Sbjct: 274 NKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPR--ASTPEFVVKAAAMQA 331
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 341
A+ + GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 332 AMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLLQVTWDEPDLL 391
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 384
VSPW +E V+S P + P PR + VP PLD
Sbjct: 392 QNVKCVSPWLVE-LVSSIPPIHLGPF----SPPRKKLRVPQHPDFPLD 434
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 507 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKEKKQEQ 563
LFG ++ TSS E + + I + + A SDG S I F + E
Sbjct: 548 LFGKAILTEQQMTSSGSRETLSSGATGNSSPISAALKAGNTSDGSGSSICIGFSSQGHEA 607
Query: 564 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 623
S L KV M+ VGR +DL+ YD L L +MF I +
Sbjct: 608 ------------SDLGLEAGHCKVFMESEDVGRTIDLSVFGSYDELYGRLADMFGIDKEE 655
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 663
T + Y D G +M G P+ +F + +R+ I S
Sbjct: 656 ITS---HLRYRDTAGAVMHTGGLPFSDFMKVARRLTITSG 692
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 147/205 (71%), Gaps = 6/205 (2%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+Y +LWK CAGPL D+PK G++VYYFPQGH+E +EAST +ELN+ P LPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 83
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
IHL E +DE Y +ITL+P+ +Q T + + RP V+SF+KVLTASDTS G
Sbjct: 84 AIHLKVENNSDETYVEITLMPDTTQVVIPTEN---ENQFRPIVNSFTKVLTASDTSAQGE 140
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV KHA ECLPPLDM+Q P QEL+A DLHG +WRFKH +R PR TTGW+ F T
Sbjct: 141 FSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTT 197
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR 222
SK+LV GD VF RGE GEL VG+R
Sbjct: 198 SKKLVVGDVIVFARGETGELRVGIR 222
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 209/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + RVSPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 209/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + RVSPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 146/215 (67%), Gaps = 35/215 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
LY+ELW AC PLV++P + +RVYYFPQGHME LEAS +QEL+Q++P F LPSKILC+ V
Sbjct: 36 LYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSFNLPSKILCKXV 95
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
N ++ I VH F K LTASDTSTHGG
Sbjct: 96 NF----------IHNCI-------------------------VHPFCKTLTASDTSTHGG 120
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSVLR+H ECLPPLDM+Q+ P QELVAKD+HG E F+HIF+GQPR HLLTTGWS FV+
Sbjct: 121 FSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLLTTGWSVFVS 180
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
+KRL GD +FLR ENGEL VGVR L RQ +++P
Sbjct: 181 TKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 209/412 (50%), Gaps = 62/412 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E A +N + FR+P ILCRV ++
Sbjct: 67 QLWHACAGGMVQMPSVNTKVFYFPQGHAEH--AQSNVDFGDS---FRIPPLILCRVASVK 121
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR--PKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+++ITL+P +N D D K SF+K LT SD + GGF
Sbjct: 122 FLADSETDEVFSKITLIP--LRNSELENDDSDGDGSENSEKPASFAKTLTQSDANNGGGF 179
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 180 SVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 239
Query: 199 KRLVAGDTFVFLRGENGELHVGVR---------------------------------CLA 225
K+LVAGD+ VFLR E+GEL VG+R
Sbjct: 240 KKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAFTAFL 299
Query: 226 RQQSSMPSSVISSQSMHLGVLATASH-----AVATQTMFVVYYKPRIITRTSQFIISLNK 280
R+++ + + + V + A + QT VVYY PR T +F I +
Sbjct: 300 REENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYY-PR--ASTPEFCIKTSA 356
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 338
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 357 VKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEP 416
Query: 339 ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDL 385
+ RVSPW +E N+ LA PR + P PLD+
Sbjct: 417 DLLHNVKRVSPWLVE-----LVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDV 463
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 549 KSDIAKEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
+S I+++F K S S S C L + KV ++ VGR LDL+ + Y
Sbjct: 614 QSSISEQFSPAK------SSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSY 667
Query: 607 DHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC---S 662
+ L +L +MF I + ++ +R ++Y D G + G++P+ +F KR+ I
Sbjct: 668 EELYRKLAKMFGIERSEMLSR----VLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSG 723
Query: 663 SQDVKKM 669
S+D +++
Sbjct: 724 SKDTRRV 730
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 196/385 (50%), Gaps = 50/385 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
VL A+ A Q V+YY PR T +F +
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PR--ASTPEFCVRAAAVRT 312
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 341
A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 313 AMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELL 372
Query: 342 TRPDRVSPWEIEPFVASATPNLVQP 366
RV PW +E + S+ PNL P
Sbjct: 373 QNVKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 632
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 196/385 (50%), Gaps = 50/385 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 18 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 71
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 72 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 131
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 132 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 191
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 192 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 251
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
VL A+ A Q V+YY PR T +F +
Sbjct: 252 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PR--ASTPEFCVRAAAVRT 308
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 341
A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 309 AMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELL 368
Query: 342 TRPDRVSPWEIEPFVASATPNLVQP 366
RV PW +E + S+ PNL P
Sbjct: 369 QNVKRVCPWLVE--LVSSMPNLHLP 391
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 632
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 600 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 656
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y G++ GD+P+ F +++ I
Sbjct: 657 YRSPAGEVKHAGDEPFCAFVKSARKLRI 684
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 192/383 (50%), Gaps = 55/383 (14%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E S + + P RLP ILCRV
Sbjct: 20 LDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDF---RNFP--RLPPYILCRVS 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTS 133
I MA+ ETDEVYA+I L P S+ + + K SF+K LT SD +
Sbjct: 75 GIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQSDAN 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 135 NGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 194
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS----VISSQSMHLG----- 244
TFV K+LVAGD+ VFLR ENG+L +G+R R P S + M G
Sbjct: 195 TFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGFNSF 254
Query: 245 --------------------------------VLATASHAVATQTMFVVYYKPRIITRTS 272
V+ A+ A Q VVYY PR T
Sbjct: 255 FREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYY-PR--ASTP 311
Query: 273 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 330
+F + + A ++ GMR+KM FE EDS F GT+ V+ P W DS WR
Sbjct: 312 EFCVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWRL 371
Query: 331 LKVQWDEPASITRPDRVSPWEIE 353
L+V WDEP + RVSPW +E
Sbjct: 372 LQVTWDEPDLLQNVKRVSPWLVE 394
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 529 SLTTEGHIIS-TISAAADSDGKSDIAKEFKEKKQEQV--QVSPKES--QSKQSCLTSNRS 583
SL++ G +S ++ + S+G D F + + Q P+ S + Q C NR
Sbjct: 550 SLSSSGDTVSPVLTGNSSSEGNLDKIANFSDGSGSALHQQGLPEHSSYEGFQWC-KGNRQ 608
Query: 584 RT---------KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 634
T KV M+ VGR LDL+ L YD L +L +MF I+ ++ T ++Y
Sbjct: 609 ETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIE---NSETLNNVLYR 665
Query: 635 DDEGDMMLVGDDPWHEFCNMVKRIFI 660
D G + +GD+P+ +F +R+ I
Sbjct: 666 DIAGIVKHIGDEPFSDFMKTARRLTI 691
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 208/423 (49%), Gaps = 76/423 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCR+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRLA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS------ 233
WSTFV K+L+AGD+ VFLR E G+L VG+R R + P
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLR 240
Query: 234 --SVISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRI 267
+ +S+ M + AT A Q VVYY PR
Sbjct: 241 DDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PR- 298
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +
Sbjct: 299 -ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PL 383
S WR L+V WDEP + R SPW +E + S P + + P PR + +P P
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRASPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPF 410
Query: 384 DLP 386
D P
Sbjct: 411 DFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 303/680 (44%), Gaps = 103/680 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEV+A++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
+ +S+ S S + V+ A+ A++ + VVYY PR TS+F +
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY-PR--ASTSEFCVKALDA 309
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSA 388
+ RV+PW +E V++ V P+ L PR M +P + +PS
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF 423
Query: 389 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP 448
S P S L + V + R + H + SD + +++R P
Sbjct: 424 PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPP----PPPP 477
Query: 449 RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLF 508
D KN + + +TP NDT ++ + LF
Sbjct: 478 SSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLF 522
Query: 509 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 568
G ++ P E++ T +I T ++ S+ +EF + SP
Sbjct: 523 GKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SP 571
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
S+ KV M+ VGR LDL+ L Y+ L +L +MF IK +
Sbjct: 572 C-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEML 627
Query: 629 WEIVYTDDEGDMMLVGDDPW 648
++Y D G + G++P+
Sbjct: 628 SSVLYRDASGAIKYAGNEPF 647
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/256 (50%), Positives = 175/256 (68%), Gaps = 8/256 (3%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQ
Sbjct: 8 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 242
P+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH
Sbjct: 68 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 127
Query: 243 LGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 302
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E
Sbjct: 128 IGVLAAAAHANANNSPFTIFYNPR--AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETE 185
Query: 303 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 186 ECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TP 242
Query: 362 NLVQPVLAKNKRPRLS 377
+ P RPR S
Sbjct: 243 FYICP--PPFFRPRFS 256
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 918 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 976
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 977 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1007
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 205/385 (53%), Gaps = 43/385 (11%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQ 61
L++P++ + + R+LW ACAG + VP G VYYFPQGH E L + +L+
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSA 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR 117
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A +
Sbjct: 64 A----RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQ 119
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+H
Sbjct: 120 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRH 179
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---- 233
I+RG PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R
Sbjct: 180 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGD 239
Query: 234 -SVISSQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRIITR 270
S + + G++ A A V A Q+ VVYY PR
Sbjct: 240 DSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PR--AS 296
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 328
T +F + A+ +++ GMR+KM FE EDS F GTV GV+ P W S W
Sbjct: 297 TPEFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPW 356
Query: 329 RSLKVQWDEPASITRPDRVSPWEIE 353
R L+V WDEP + RVSPW +E
Sbjct: 357 RLLQVTWDEPDLLQNVKRVSPWLVE 381
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 205/385 (53%), Gaps = 43/385 (11%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQ 61
L++P++ + + R+LW ACAG + VP G VYYFPQGH E L + +L+
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSA 63
Query: 62 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR 117
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A +
Sbjct: 64 A----RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQ 119
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+H
Sbjct: 120 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRH 179
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---- 233
I+RG PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R
Sbjct: 180 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGD 239
Query: 234 -SVISSQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRIITR 270
S + + G++ A A V A Q+ VVYY PR
Sbjct: 240 DSPAAGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PR--AS 296
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 328
T +F + A+ +++ GMR+KM FE EDS F GTV GV+ P W S W
Sbjct: 297 TPEFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPW 356
Query: 329 RSLKVQWDEPASITRPDRVSPWEIE 353
R L+V WDEP + RVSPW +E
Sbjct: 357 RLLQVTWDEPDLLQNVKRVSPWLVE 381
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 209/426 (49%), Gaps = 74/426 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L +LW ACAG +V +P G +V YFPQGH EQ A IP F R ILCRV
Sbjct: 22 LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTILCRV 72
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKV 126
+++ +A+ ETDEVYA++ L PE + +E P + P SF+K
Sbjct: 73 ISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKT 128
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 129 LTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRH 188
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV----ISSQSMH 242
LLTTGWSTFV K+LVAGD VFLR +GEL VGVR R + S + QS +
Sbjct: 189 LLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQSGY 248
Query: 243 LGVLATASHAVATQTM------------------------FVVYYKPRIITRTSQFIISL 278
+L+ + + F V Y PR T++F +
Sbjct: 249 SELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPR--ASTAEFCVRA 306
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 336
+ ++ + + GMR+KM FE EDS F GT+ V+ P W S WR L+V WD
Sbjct: 307 SVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQVSWD 366
Query: 337 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 396
EP + +RVSPW++E LV L M++PP LP P +
Sbjct: 367 EPDLLQGVNRVSPWQVE---------LVS---------TLPMQLPPFSLPRKKIRPLDLQ 408
Query: 397 LAQSHN 402
+S
Sbjct: 409 FGESQG 414
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 692 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 747
Query: 645 DDPWHEFCNMVKRIFICS 662
+P+ F V+R+ I +
Sbjct: 748 GEPYGNFVKSVRRLTILA 765
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 198/389 (50%), Gaps = 66/389 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVR-------------------------------------- 222
LVAGD+ VF+R NG+L VG+R
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 223 ---CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFII 276
AR + + P V+ + ++ A + Q VVYY PR T +F +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PR--ASTPEFCV 305
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 306 KAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVA 365
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNL 363
WDEP + RVSPW +E + S+TP +
Sbjct: 366 WDEPDLLQNVKRVSPWLVE--LVSSTPAI 392
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 643
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 623 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 678
Query: 644 GDDPWHEFCNMVKRIFI 660
GD+P+ EF +R+ I
Sbjct: 679 GDEPFSEFTKTARRLTI 695
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 196/368 (53%), Gaps = 47/368 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVVNI 79
+LW ACAG +V +P +V+YFPQGH E A +N + RIP+ P ILCRV +
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEH--AQSNVDFGAARIPI---PPLILCRVAAV 65
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+A++ L+P S+ + D K SF+K LT SD + GGF
Sbjct: 66 KFLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPASFAKTLTQSDANNGGGF 125
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 126 SVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 185
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS------------------------- 233
K+LVAGD+ VFLR ENG+L VG+R R P
Sbjct: 186 KKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPYGAFSGFM 245
Query: 234 ------SVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNN 287
+ +S +S+ V AS+ Q VVYY PR T +F I + A+
Sbjct: 246 REESGRAKVSGESVREAVTLAASN----QAFEVVYY-PR--ANTPEFCIRTSAVRGAMRI 298
Query: 288 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 345
++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 299 QWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHNVK 358
Query: 346 RVSPWEIE 353
RVSPW +E
Sbjct: 359 RVSPWLVE 366
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 637
L S+ S KV M+ VGR LDL+ L Y L L MF I+ + ++Y D
Sbjct: 553 LGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE---RSDMLSHVLYCDSS 609
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
G + +G++P+ EF KR+ I + + K
Sbjct: 610 GALKQIGEEPFSEFMKTAKRLTILTDSNNK 639
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 195/380 (51%), Gaps = 56/380 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + +P R+P+ +LCRV +
Sbjct: 14 QLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVD------LPAGRVPALVLCRVAAVR 67
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
MA+ +TDEV+A+I L P EP + + + K SF+K LT SD + G
Sbjct: 68 FMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPASFAKTLTQSDANNGG 127
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 128 GFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFV 187
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV--------------ISSQSMH 242
K+LVAGD+ VF+R ENG+L VG+R + P + + SM
Sbjct: 188 NQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGGGYAGFSMF 247
Query: 243 L---------------------------GVLATASHAVATQTMFVVYYKPRIITRTSQFI 275
L V+ A+ AV+ Q VVYY PR T +F
Sbjct: 248 LRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYY-PR--ASTPEFC 304
Query: 276 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 333
+ A+ ++ GMR+KM FE EDS F GTV V P W +S WR L+V
Sbjct: 305 VKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSPWRLLQV 364
Query: 334 QWDEPASITRPDRVSPWEIE 353
WDEP + RVSPW +E
Sbjct: 365 AWDEPDLLQNVKRVSPWLVE 384
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 642
KV MQ VGR LDL+ + Y+ L L +MF + K +L + + Y DD G +
Sbjct: 632 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDKAELTS----HVFYRDDASGALKH 687
Query: 643 VGDDPWHEFCNMVKRIFICSSQ 664
GD+P+ EF +R+ I + +
Sbjct: 688 PGDEPFSEFTKTARRLTILTDE 709
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 210/685 (30%), Positives = 302/685 (44%), Gaps = 91/685 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV+YFPQGH E A + + P ++PS LCRV I
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDF---RNCP--KVPSYTLCRVSAIK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGF
Sbjct: 76 FLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGF 135
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 136 SVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNH 195
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI---------------------- 236
K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 196 KKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRE 255
Query: 237 -------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRIITRTSQFII 276
S+ M+ +G V A A Q +++Y PR T +F +
Sbjct: 256 DDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PR--ASTPEFCV 312
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V
Sbjct: 313 KAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVT 372
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWS 394
WDEP + RVSPW +E V+S +P + P K+ R D P P
Sbjct: 373 WDEPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVP 428
Query: 395 ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR----- 449
+ + H D H H S + +S+ QS G + R
Sbjct: 429 SFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPA 487
Query: 450 ---VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--TETGTS 504
+ S + E ++N+S + HST K + + + GR TE S
Sbjct: 488 AGSTRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKKFDGVKTPQLILFGRPILTELQMS 546
Query: 505 CRLFG--IELINHATSSAPSEKVPVSSLT-TEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G + + SS+ +++L+ G + S G++ F+ K
Sbjct: 547 QSFSGDTVSPVGTGNSSSDGNGDKMTNLSDGSGSALHQQGLPEGSAGEN-----FQWYKD 601
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
+ ++ P + KV M+ VGR LDL++L Y+ L +L MF I
Sbjct: 602 NRQEIDP----------NLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGID- 650
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDD 646
++ T ++Y D G + VGD+
Sbjct: 651 --NSETLNHVLYRDVSGAVKHVGDE 673
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 198/378 (52%), Gaps = 53/378 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E N + ++P F + CRVV +
Sbjct: 21 QLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPF-----VPCRVVAVK 75
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
MA+ ETDEVYA++ L+P + + D A++ R K SF+K LT SD + GGFSV
Sbjct: 76 YMADPETDEVYAKLKLVPLNANDVDYDHDVIGAET-RDKPASFAKTLTQSDANNGGGFSV 134
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 135 PRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 194
Query: 201 LVAGDTFVFLRGENGELHVGVRCL----------------ARQQSSMPSSVIS------- 237
LVAGD+ VFLR ENG+L VG+R A MP S S
Sbjct: 195 LVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGFSPFLREDD 254
Query: 238 --------SQSMHLGV------------LATASHAVATQTMFVVYYKPRIITRTSQFIIS 277
S ++ V + A++ A + F V Y PR T +F +
Sbjct: 255 NRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPR--ASTPEFCVK 312
Query: 278 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 335
+ A+ ++ G+R+KM FE EDS F GT+ V+ P +W +S WR L+V W
Sbjct: 313 ASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPWRLLQVTW 372
Query: 336 DEPASITRPDRVSPWEIE 353
DEP + RVSPW +E
Sbjct: 373 DEPDLLQNVRRVSPWLVE 390
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
KV M+ VGR +DL+ L YD L +L +MF I K ++ +R ++Y D G + +G
Sbjct: 565 KVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR----VLYCDSVGAIKHIG 620
Query: 645 DDPWHEFCNMVKRIFI 660
D+P+ +F KR+ I
Sbjct: 621 DEPFSDFTRTAKRLTI 636
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 213/441 (48%), Gaps = 89/441 (20%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L +LW ACAG +V +P G +V YFPQGH EQ A IP F R ILCRV
Sbjct: 63 LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTILCRV 113
Query: 77 VNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKV 126
+++ +A+ ETDEVYA++ L PE + +E P + P SF+K
Sbjct: 114 ISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKT 169
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 170 LTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRH 229
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---------------QQSSM 231
LLTTGWSTFV K+LVAGD VFLR +GEL VGVR R Q S+
Sbjct: 230 LLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQRSL 289
Query: 232 PSSV----ISSQSMHLGVLATASHAVATQTM------------------------FVVYY 263
P + I S+S + +L+ + + F V Y
Sbjct: 290 PQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVY 349
Query: 264 KPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 321
PR T++F + + ++ + + GMR+KM FE EDS F GT+ V+ P
Sbjct: 350 YPR--ASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPI 407
Query: 322 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 381
W S WR L+V WDEP + +RVSPW++E LV L M++P
Sbjct: 408 RWPSSPWRILQVSWDEPDLLQGVNRVSPWQVE---------LVS---------TLPMQLP 449
Query: 382 PLDLPSAASAPWSARLAQSHN 402
P LP P + +S
Sbjct: 450 PFSLPRKKIRPLDLQFGESQG 470
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 748 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 803
Query: 645 DDPWHEFCNMVKRIFICS 662
+P+ F V+R+ I +
Sbjct: 804 GEPYGNFVKSVRRLTILA 821
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 211/419 (50%), Gaps = 72/419 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLT 128
++ +A+ ETDEV+A+ITLLP P + D +P + K SF+K LT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP---------- 232
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRD 240
Query: 233 --SSVISSQSMHLGVLATA-SHAVAT------------------QTMFVVYYKPRIITRT 271
S+ +S+ M + +A AT Q VVYY PR T
Sbjct: 241 DESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY-PR--AST 297
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 329
+F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR
Sbjct: 298 PEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWR 357
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 386
L+V WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 358 LLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKIRIPQPFEFP 409
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGVIKRIGD 641
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 205/409 (50%), Gaps = 60/409 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ-------------- 239
TFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 240 -SMHL------------------------GVLATASHAVATQTMFVVYYKPRIITRTSQF 274
SM L V+ A+ AV+ Q VVYY PR T +F
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PR--ASTPEF 315
Query: 275 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 332
+ A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 316 CVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQ 375
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 381
V WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 376 VSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 645 DDPWHEFCNMVKRIFICS 662
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 210/426 (49%), Gaps = 81/426 (19%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLT 128
+ +A+ ETDEV+++ITLLP P + D +P P K SF+K LT
Sbjct: 61 AVKFLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL----- 243
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R + S+ + S + ++
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVGSDNNNIPYPGF 238
Query: 244 --------------------GVLATASHAVA-------------------TQTMFVVYYK 264
G ++A A Q VVYY
Sbjct: 239 SGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVVYY- 297
Query: 265 PRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-H 322
PR T +F + + A+ ++ GMR+KM FE EDS F GTV V+ P
Sbjct: 298 PR--ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIR 355
Query: 323 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP 381
W +S WR L+V WDEP + RVSPW +E + S P + + P PR + +P
Sbjct: 356 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKLRIP 408
Query: 382 -PLDLP 386
P + P
Sbjct: 409 QPFEFP 414
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 593 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEERSDLLT--HVVYRDANGVIKRIGD 650
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 651 EPFSDFMRATKRLTI 665
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 205/409 (50%), Gaps = 60/409 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ-------------- 239
TFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 240 -SMHL------------------------GVLATASHAVATQTMFVVYYKPRIITRTSQF 274
SM L V+ A+ AV+ Q VVYY PR T +F
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PR--ASTPEF 315
Query: 275 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 332
+ A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 316 CVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQ 375
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 381
V WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 376 VSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 645 DDPWHEFCNMVKRIFICS 662
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 224/452 (49%), Gaps = 62/452 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + + +P+ P +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDHVDFKNLPI---PPMVLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
MA+ E+DEV+A++ L+P E E + + K SF+K LT SD +
Sbjct: 73 YMADPESDEVFAKLKLIPLKDNDHEYRDGEESN---GLGSNNSEKTPSFAKTLTQSDANN 129
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 130 GGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSN 189
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQ 228
FV K+LVAGD+ VF+R ENG+L VG+R L R
Sbjct: 190 FVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSLLRDD 249
Query: 229 SSMPSSVISSQSMHL---GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
SS ++ + + V+ A AV+ + VVYY PR +S+F + A+
Sbjct: 250 ERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYY-PR--ASSSEFCVKALDARAAM 306
Query: 286 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 343
+ GMR+KM FE EDS F GTV V P W +S WR L+V WDEP +
Sbjct: 307 RIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPDLLQY 366
Query: 344 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAPWSAR 396
RV+PW +E V++ V P++ PR M +P + +PS AS P
Sbjct: 367 VKRVNPWLVE-LVSN-----VHPIIPSFSPPRKKMRLPQHPDYNTRISVPSFASNPLIRS 420
Query: 397 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
S L + V + R + H + SD
Sbjct: 421 SPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL 452
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 195/388 (50%), Gaps = 54/388 (13%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S + L +LW ACAG +V +P +V+YFPQGH E + + + L ++P
Sbjct: 3 SCEKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM-----LPKIPPL 57
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---KVHSFSKVLT 128
ILCRV + +A+ ETDEVYA+I L+P NEP D S K SF+K LT
Sbjct: 58 ILCRVGAVKYLADVETDEVYAKIRLVPV-GNNEPEFEDAVLGSSASETAEKPTSFAKTLT 116
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLL
Sbjct: 117 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLL 176
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS---SMPSSVISSQSMHLGV 245
TTGWSTFV K+LVAGD+ VFLR +NG+L VG+R R + PS + G
Sbjct: 177 TTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGG 236
Query: 246 LAT--------------------------------------ASHAVATQTMFVVYYKPRI 267
+ A++ AT F V Y PR
Sbjct: 237 FSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPR- 295
Query: 268 ITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKD 325
T +F + + A+ ++ G+R+KM FE EDS F GT+ V+ P HW +
Sbjct: 296 -ANTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPN 354
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIE 353
S WR L+V WDEP + VSPW +E
Sbjct: 355 SPWRLLQVTWDEPDLLQNVKHVSPWLVE 382
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 171/282 (60%), Gaps = 23/282 (8%)
Query: 113 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 172
D + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +
Sbjct: 21 GDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMK 80
Query: 173 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 232
WRF+HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++
Sbjct: 81 WRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEAL 140
Query: 233 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVG 292
++ L +L+ + ++ +++F + + PRI S+FI+ K+L+ +N F++G
Sbjct: 141 LEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRI--GASEFIVPYCKFLKGLNYPFSIG 198
Query: 293 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 351
R+K+ + ED+ ER F G + G+ + P W SKW+SL V+WD + +RVSPW+
Sbjct: 199 TRFKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWD 257
Query: 352 IEPFVASAT-------------------PNLVQPVLAKNKRP 374
IE +S + NL P+L N RP
Sbjct: 258 IERVGSSVSVTHCLSSCVSKRMKLCFPQGNLDAPILDGNGRP 299
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 206/420 (49%), Gaps = 73/420 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKV 126
++ +A+ ETDEV+A+ITLLP P + P + D + K SF+K
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASFAKT 120
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 121 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRH 180
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS------------- 233
LLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 181 LLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPGFSGF 240
Query: 234 -----SVISSQSMHLGVLATASHAVA------------------TQTMFVVYYKPRIITR 270
+ +S+ M + +A A Q VVYY PR
Sbjct: 241 LRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYY-PR--AS 297
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 328
T +F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S W
Sbjct: 298 TPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 357
Query: 329 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 386
R L+V WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 358 RLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKIRIPQPFEFP 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 589 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGAIKRIGD 646
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 647 EPFSDFMKSTKRLTI 661
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/259 (50%), Positives = 175/259 (67%), Gaps = 6/259 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNI 79
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL+ IP + LPSK++C+++++
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSKLICKLLSL 82
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGF
Sbjct: 83 TLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGF 142
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
KRL+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 259 FVVYYKPRIITRTSQFIIS 277
F ++Y PR S ++IS
Sbjct: 263 FTIFYNPRYY---SSYLIS 278
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 210/368 (57%), Gaps = 33/368 (8%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 21 LNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 80
Query: 77 VNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
++ + A+ ETDEVYAQ+TL P QN+P P S +P + F K LTASDTST
Sbjct: 81 HDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTASDTST 139
Query: 135 HGGFSVLRKHATECLPPL----------------DMNQSTPTQELVAKDLHG-YEWRFKH 177
HGGFSV R+ A PPL Q P ++L W +
Sbjct: 140 HGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPGSWNGRA 199
Query: 178 IFRG----QPRRHLLTTGWSTFVTSKRLVAGDTFV----FLRGENGELHVGVRCLARQQS 229
+ R +P R + T T++R V L E +L +G+R +R Q+
Sbjct: 200 LARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLGNEKNQLLLGIRRASRPQT 259
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV-NNK 288
MPSSV+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L+KY++AV + +
Sbjct: 260 VMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPR--ASPSEFVIPLSKYIKAVFHTR 317
Query: 289 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 347
+VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP RV
Sbjct: 318 ISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRV 377
Query: 348 SPWEIEPF 355
S WEIEP
Sbjct: 378 SLWEIEPL 385
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 733 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 791
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 792 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 828
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 204/413 (49%), Gaps = 63/413 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 72 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 131
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 132 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 191
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 192 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 251
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRIITRT 271
V+ AS A + Q V YY PR T
Sbjct: 252 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PR--AST 308
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWR 329
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR
Sbjct: 309 PDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWR 368
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 382
L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 369 LLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 416
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 192/383 (50%), Gaps = 61/383 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P+ +V+YFPQGH E A TN L RLP ILC V +
Sbjct: 11 QLWHACAGGMVQMPQMNSKVFYFPQGHAEH--AHTNIHL-------RLPPFILCNVEAVK 61
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-----SPRPKVHSFSKVLTASDTSTH 135
MA ETDEV+A+++LLP + D D S K SF+K LT SD +
Sbjct: 62 FMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLTQSDANNG 121
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+F
Sbjct: 122 GGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSF 181
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR----------------------------C---- 223
V K+LVAGD+ VFLR ENG+L VG+R C
Sbjct: 182 VNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGNGNCGIGP 241
Query: 224 -------LARQQSSMPSSVISSQSMHLGVLA----TASHAVATQTMFVVYYKPRIITRTS 272
L + + + + S + V A A A+ F V Y PR T
Sbjct: 242 YGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKPFEVVYYPR--ASTP 299
Query: 273 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 330
+F + + A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR
Sbjct: 300 EFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPIRWPNSPWRL 359
Query: 331 LKVQWDEPASITRPDRVSPWEIE 353
L+V WDEP + RVSPW +E
Sbjct: 360 LQVTWDEPDLLQNVKRVSPWLVE 382
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 546 SDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLT 601
SD K D AK + Q + Q SP ++ S + L + KV ++ VGR LDL+
Sbjct: 550 SDDK-DKAKCLMDDSQSTLSQQFSPGKASSAEFSWQLGLDTGHCKVFLESEDVGRTLDLS 608
Query: 602 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
Y+ L L MF I+ + ++Y D G G++P+ +F KR+ I
Sbjct: 609 LFGSYEDLYRRLAIMFGIE---RSEILNHVLYHDAAGAAKKTGEEPFSDFMKTAKRLTIL 665
Query: 662 ---SSQDVKK 668
SS+++K+
Sbjct: 666 TDSSSKNIKR 675
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 196/381 (51%), Gaps = 45/381 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
V+ AS A + Q VVYY PR T +F++ A+
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PR--ASTPEFVVKAASVQNAM 308
Query: 286 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSLKVQWDEPASIT 342
N++ GMR+KM FE EDS F GT+ V D + W +S WR L+V WDEP +
Sbjct: 309 RNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQVSWDEPDLLQ 367
Query: 343 RPDRVSPWEIEPFVASATPNL 363
V+PW +E + S+ P +
Sbjct: 368 NVKCVNPWLVE--IVSSIPPI 386
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 574 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 633
K S L KV M+ VGR +DL+ Y+ L +L +MF I+ R + Y
Sbjct: 541 KASELGLEDGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMR---HLCY 597
Query: 634 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
D G + G++P+++F + +R+ I + + P
Sbjct: 598 RDAAGAVRHTGEEPFNDFMKVARRLTIIEGTEGRPQKP 635
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 204/413 (49%), Gaps = 63/413 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 78 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 133
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 134 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 193
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 194 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 253
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 254 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 313
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRIITRT 271
V+ AS A + Q V YY PR T
Sbjct: 314 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PR--AST 370
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWR 329
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR
Sbjct: 371 PDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWR 430
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 382
L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 431 LLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 478
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 208/419 (49%), Gaps = 59/419 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + L R P+ ILCRV +
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSA-----LPRSPALILCRVAAVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHG 136
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + G
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGG 126
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 127 GFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLTTGWSSFV 186
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP----------------SSVISSQS 240
K+LVAGD+ VFLR ENGEL VG+R R P S+ + +
Sbjct: 187 NQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEM 246
Query: 241 MHLGVLAT------------------ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYL 282
G L + A+H ++ F V Y PR T +F + +
Sbjct: 247 SKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPR--ANTPEFCVRASSVN 304
Query: 283 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 340
A+ ++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP
Sbjct: 305 AAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPDL 364
Query: 341 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 392
+ VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 365 LQNVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 639
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 640 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 668
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 203/387 (52%), Gaps = 38/387 (9%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQ-LEASTNQELNQRIPLFRLPSKILCRVVN 78
R+LW ACAG + VP G VYYFPQGH E L + +L+ R+P+ + CRV
Sbjct: 21 RQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTADLSAA----RVPALVPCRVAA 76
Query: 79 IHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+ MA+ +TDEV+A+I L+P A + K SF+K LT SD + GGF
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPASFAKTLTQSDANNGGGF 136
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 137 SVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWSTFVNQ 196
Query: 199 KRLVAGDTFVFLRGENGELHVGVR------C--------------------LARQQSSMP 232
K+LVAGD+ VFLRG++G+LHVG+R C L R S
Sbjct: 197 KKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYAGLMRGNVSPC 256
Query: 233 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVG 292
++ + + +A A+ A F Y PR T +F + A+ +++ G
Sbjct: 257 AAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPR--ASTPEFCVRAAAVRAAMRVQWSPG 314
Query: 293 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 350
MR+KM FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW
Sbjct: 315 MRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPW 374
Query: 351 EIEPFVASATPNL-VQPVLAKNKRPRL 376
+E + S+ P + + K+PR+
Sbjct: 375 LVE--LVSSMPAIHLASFSPPRKKPRI 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 571 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG-QLHTRTKW 629
SQ + S L + KV ++ VGR LDL+ L +D L L EMF I+G +L +R
Sbjct: 611 SQQQVSELGLEPGQCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELRSR--- 667
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
++Y G++ GD+P+ +F +R+ I
Sbjct: 668 -VLYRCATGEVKHAGDEPFSDFVRSARRLTI 697
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 204/413 (49%), Gaps = 63/413 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 36 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 91
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 92 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 151
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 152 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 211
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 212 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 271
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRIITRT 271
V+ AS A + Q V YY PR T
Sbjct: 272 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PR--AST 328
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-WKDSKWR 329
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR
Sbjct: 329 PDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWR 388
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 382
L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 389 LLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 436
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 209/420 (49%), Gaps = 61/420 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + + L R P+ ILCRV +
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFS-----ALPRSPALILCRVAAVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHG 136
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + G
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGG 126
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 127 GFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLTTGWSSFV 186
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR---------------------------CLARQQS 229
K+LVAGD+ VFLR ENGEL VG+R R++
Sbjct: 187 NQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEM 246
Query: 230 SMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
S ++ S G V+ A A + Q VVYY PR T +F + +
Sbjct: 247 SKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYY-PR--ANTPEFCVRASSV 303
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ ++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP
Sbjct: 304 NAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPD 363
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 392
+ VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 364 LLQNVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 639
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 640 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 668
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 195/377 (51%), Gaps = 55/377 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P+ +V+YFPQGH E + + R+P ILC V +
Sbjct: 11 QLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTID---------LRVPPFILCNVEAVK 61
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTH 135
MA+ ETD+V+A+++L+P S+ P + D+ P K SF+K LT SD +
Sbjct: 62 FMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLTQSDANNG 121
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+F
Sbjct: 122 GGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSF 181
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR------------------------------CLA 225
V K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 182 VNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIGPFSFFL 241
Query: 226 RQQSSM---PSSVISSQSMHLGVLA----TASHAVATQTMFVVYYKPRIITRTSQFIISL 278
++++ M V + S + V A A A+ F V Y PR T +F +
Sbjct: 242 KEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPR--ASTPEFCVKA 299
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 336
+ A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR L+V WD
Sbjct: 300 SSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQVTWD 359
Query: 337 EPASITRPDRVSPWEIE 353
EP + RVSPW +E
Sbjct: 360 EPDLLQNVKRVSPWLVE 376
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 565 QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
Q SP ++ S + L + KV ++ VGR LDL+ Y+ L L MF I+
Sbjct: 566 QFSPGKASSAEFFWQLGLDTGHCKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-- 623
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
+ ++Y D G + G++P+ +F KR+ I + K +
Sbjct: 624 -RSEILNHVLYYDAAGAVKQTGEEPFSDFMKTAKRLTILTDSGSKNI 669
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 205/417 (49%), Gaps = 60/417 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + +P+ +LCRV +H
Sbjct: 25 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGIPALVLCRVAGVH 84
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLTASD 131
MA+ +TDEV+A+I L+P +P K SF+K LT SD
Sbjct: 85 FMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKPASFAKTLTQSD 144
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 145 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTG 204
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR----------------------------C 223
WS+FV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 205 WSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPPPPGTNYGGFSM 264
Query: 224 LARQQSSMPSSVISSQSMHLGV---------LATASHAVATQTMFVVYYKPRIITRTSQF 274
R + + ++++ + G +A A++ A+ F V Y PR T +F
Sbjct: 265 FLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVYYPR--ASTPEF 322
Query: 275 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 332
+ A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 323 CVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIRWPNSPWRLLQ 382
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 384
V WDEP + RVSPW +E + S P + LA PR + VP PLD
Sbjct: 383 VTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVPFYPELPLD 434
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
K+ MQ VGR LDL + YD L L +MF I+ R ++ Y D G + GD
Sbjct: 628 KIFMQSEDVGRTLDLAAVGSYDELYRRLADMFGIEKAELMR---QVFYRDAAGALKHTGD 684
Query: 646 DPWHEFCNMVKRIFICSS 663
+P+ +F +R+ I +
Sbjct: 685 EPFSDFTKTARRLTILTG 702
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 192/385 (49%), Gaps = 50/385 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
G R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
VL A+ A Q V+YY PR T +F +
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PR--ASTPEFCVRAAAVRT 312
Query: 284 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 341
A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 313 AMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELL 372
Query: 342 TRPDRVSPWEIEPFVASATPNLVQP 366
RV PW +E + S+ PNL P
Sbjct: 373 QNVKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 573 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 632
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 207/405 (51%), Gaps = 40/405 (9%)
Query: 5 LGSLSQPSSNSDD--LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
L++P++ + + R+LW ACAG + VP G V YFPQGH E + +
Sbjct: 4 FADLTEPAAAGAERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEH---ALGLDGAAD 60
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKV 120
+ R+P+ + CRV + MA+ +TDEV+A+I L+P + D A + K
Sbjct: 61 LSAARVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKP 120
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+R
Sbjct: 121 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYR 180
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS-- 238
G PRRHLLTTGWSTFV K+L+AGD+ VFLRG++G+LHVG+R R
Sbjct: 181 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAP 240
Query: 239 -------QSMHLGVLATASHAVA------------------TQTMFVVYYKPRIITRTSQ 273
+ G ++ + A A Q+ VVYY PR T +
Sbjct: 241 TPGWHHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PR--ASTPE 297
Query: 274 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 331
F + A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L
Sbjct: 298 FCVRAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLL 357
Query: 332 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
+V WDEP + RVSPW +E V+S + K+PR+
Sbjct: 358 QVTWDEPDLLQNVKRVSPWLVE-LVSSMPAIHLASFSPPRKKPRI 401
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 642
+ KV ++ VGR LDL+ L +D L L EMF ++G + ++Y G++
Sbjct: 622 GQCKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEG---AEMRSRVLYRGATGEVRH 678
Query: 643 VGDDPWHEFCNMVKRIFICS 662
GD+P+ +F +RI I +
Sbjct: 679 AGDEPFSDFVKSARRITILT 698
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 219/741 (29%), Positives = 319/741 (43%), Gaps = 140/741 (18%)
Query: 5 LGSLSQPSSNSDD-LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+ S+ P N D L +LW ACAG L+ +P +V YFPQGH E A N +
Sbjct: 1 MDSVIDPMMNHDKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEH--AQGNVDFGNA- 57
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDP 110
R+PS I CRV I MA+ ETDEV+A+I L P + NE + D
Sbjct: 58 ---RIPSIIPCRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQD- 113
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG
Sbjct: 114 --------KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHG 165
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ--- 227
W+F+HI+RG PRRHLLTTGWS+FV K+LVAGD+ VFLR E G+L +GVR R
Sbjct: 166 EIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGC 225
Query: 228 ----------QSSMPSSVISSQSM-----HLG----------------VLATASHAVATQ 256
+S S V S M LG V+ A A + Q
Sbjct: 226 GIDYSPGWNPTNSGSSLVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQ 285
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVG 315
+ +VYY T +F++ + A+ + MR+KM FE EDS F GTV
Sbjct: 286 SFEIVYYP---CAGTPEFVVKASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSS 342
Query: 316 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKR 373
++ P W DS WR L+V WDEP + V+PW +E V P + V P K+
Sbjct: 343 IQAADPIRWPDSPWRMLQVTWDEPDLLQNVKSVNPWLVE--VVVNMPAIHVSPFSPPRKK 400
Query: 374 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 433
PR ++ +S + + N Q +TA A +H+ F
Sbjct: 401 PRFPLQADSSGFGHLPMPSFSTNIFDTTNPLQ-GITANKIPAGIQGA---RHTQFG---- 452
Query: 434 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 493
L+SP ++ S+ L + S H +TP P D
Sbjct: 453 -----------LSSPNLQISKLLPGQ-------FSPGLKHLDDATPLPGIRGEDIF---- 490
Query: 494 ETGRKTETGTSCRLFGIELINH------ATSSAPSEKVPVSSLTTEGHII---------- 537
G K +C L+ + + NH ++ + E S T HII
Sbjct: 491 -AGMKNP--DNCSLW-LPMRNHIQSSKESSKESSKESSKESKETKPAHIILFGQLIFPNQ 546
Query: 538 -STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ------SCLTSNRSRTKVQMQ 590
++ S + D+ SD +E + +S +++ S + S L + + ++ + +
Sbjct: 547 QNSNSCSGDTMNASDANQEKASNLSDGSGLSSQQNGSLENSSEGGSTLYNGQDKSGLSLD 606
Query: 591 GVA---------VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
V VG LDL++L Y+ L +L M + + ++Y D G
Sbjct: 607 TVYCKVFVELENVGCNLDLSSLRSYEELYRKLGNMVGLGSSEMLNS---VLYQDTLGATK 663
Query: 642 LVGDDPWHEFCNMVKRIFICS 662
VG++P+ EF +++ I +
Sbjct: 664 HVGEEPFSEFLKKAQKLTIST 684
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 221/433 (51%), Gaps = 76/433 (17%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVVNI 79
+LW ACAG +V +P +V+YFPQGH E A +N + RIP+ P ILC V +
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEH--AQSNVDFGAARIPI---PPLILCCVAAV 65
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
+A+ ETDEV+A++ ++P S+ + D A+ K SF+K LT SD + GGF
Sbjct: 66 KFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSE-KPASFAKTLTQSDANNGGGF 124
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 125 SVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQ 184
Query: 199 KRLVAGDTFVFLRGENGELHVGVR------------------------------------ 222
K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 185 KKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPGLGLGPGPG 244
Query: 223 ------CLARQQSSMPSS---VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQ 273
R++S + S +S +S+ V AS+ Q VVYY PR T +
Sbjct: 245 PYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASN----QPFEVVYY-PR--ANTPE 297
Query: 274 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 331
F I + A+ +++ GMR+KM FE EDS F GT+ V+ P W +S WR L
Sbjct: 298 FCIRTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWRLL 357
Query: 332 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD-- 384
+V WDEP + RVSPW +E + S P + LA PR + P PLD
Sbjct: 358 QVTWDEPDLLHNVKRVSPWLVE--LVSNVPII---HLAPFSPPRKKLRFPQHPEFPLDFQ 412
Query: 385 --LPSAASAPWSA 395
+PS + P+ +
Sbjct: 413 FPIPSFSGNPFGS 425
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 637
+ S+ S KV ++ VGR LDL+ L Y+ L L MF I+ + ++Y D
Sbjct: 583 VGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFGIE---RSEMLSHVLYRDAA 639
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
G + G++P+ EF KR+ I + + K
Sbjct: 640 GALKQTGEEPFSEFMKTAKRLTILTDSNNK 669
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 209/724 (28%), Positives = 294/724 (40%), Gaps = 151/724 (20%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 11 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 64
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHG 136
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + G
Sbjct: 65 YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGG 123
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 124 GFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFV 183
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV----- 245
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 184 NKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLR 243
Query: 246 -------------------------LATASHAVATQTMFVVYYKPRIITRTSQFIISLNK 280
+A A+ A FV+ Y PR T +F + +
Sbjct: 244 EDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPR--ASTPEFCVKASS 301
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR--------- 329
A+ ++ GM++KM FE +DS F G + V P W +S WR
Sbjct: 302 VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVLEYEI 361
Query: 330 --------------SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 374
L+V WDEP + RV+PW +E + S P++ + P K+
Sbjct: 362 QKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKL 419
Query: 375 RLSM--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHS 426
RL ++P S A P S S N+ A H + S
Sbjct: 420 RLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR------HAQFGLSSS 473
Query: 427 DFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN 486
D N K LF + + +A P+ + NN
Sbjct: 474 DLHFN-------------------KLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENN 514
Query: 487 DTLLEQVETGRKTETGTSCR--------LFG--IELINHATSSAPSEKVPVSSLTTEGHI 536
+ + + G T+ LFG I + + S + +SS
Sbjct: 515 ENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDTAGISS------- 567
Query: 537 ISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSNR-----------SR 584
SDG + F + Q P+ES S + LT +
Sbjct: 568 ---------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGH 618
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
KV M+ VGR LDL+ L Y+ L +L MF I+ ++Y D+ G + +G
Sbjct: 619 CKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIG 675
Query: 645 DDPW 648
D P+
Sbjct: 676 DAPF 679
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 205/685 (29%), Positives = 302/685 (44%), Gaps = 107/685 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + + IP +LCRV ++
Sbjct: 12 QLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVDFSSSPPIPAL-----LLCRVASVK 66
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH---SFSKVLTASDTSTHGG 137
+A+ ETDEVYA+I L+P P+ EP + V SF+K LT SD + GG
Sbjct: 67 FLADAETDEVYAKIMLVPLPN-TEPDLENDAVFGGGSDNVEKPASFAKTLTQSDANNGGG 125
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R A P LD P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 126 FSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVN 185
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV------ISSQSMHLGVLATASH 251
K+LVAGD+ VFLR ENGEL VG+R R + S +S G L
Sbjct: 186 HKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSGFLKEDES 245
Query: 252 AVA-------------------------TQTMFVVYYKPRIITRTSQFIISLNKYLEAVN 286
+ Q +VYY PR T +F + + A+
Sbjct: 246 KITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYY-PR--ASTPEFCVKASAVRAAMR 302
Query: 287 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 344
+ MR+KM FE ED F GTV V P W +S WR L+V WDEP +
Sbjct: 303 VPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEPDLLQNV 362
Query: 345 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAAS---APWSARLAQS 400
+RVSPW +E V + P + P PR + +P LD P P+S +S
Sbjct: 363 ERVSPWLVE-LVPNMLPVHLSPF--STVTPRKKLRLPKHLDFPLVEQFPMPPFSGHPLRS 419
Query: 401 HN-LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS----DGEWLTSPRVKFSQQ 455
N L LS D H SS+ +++ +S G L P+ +
Sbjct: 420 SNPLRCLS----DNAPAGIQGARHAQFRLSSSDPHLNKLKSGLFPSGFQLFDPQARVPNG 475
Query: 456 L-FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELIN 514
+ + D N + + G+S+P ++ E G++ + LFG ++
Sbjct: 476 ISMTKHTDSNDDNLSCLLTVGNSSPK----------KKSENGKRHQF----LLFGQPIL- 520
Query: 515 HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES--- 571
+E+ S +T +A + D + D + + + Q+SP++S
Sbjct: 521 -------TEQQLSRSCST-----GVKTALENEDKRKDYSN--GSESALENQLSPEKSFTT 566
Query: 572 --------QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 623
Q+ + + + ++ + V R LDLT L Y+ L L MF G+
Sbjct: 567 RLLWQQDYQAPEPGSATGHCKVFLESEDVG--RTLDLTVLGSYEELYMRLANMF---GRE 621
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPW 648
+ ++Y D G + GD+P+
Sbjct: 622 RSEMLGHVLYRDATGAVKQTGDEPF 646
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 199/408 (48%), Gaps = 62/408 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----IPCRVEAIR 85
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGG 137
MA ETDEVYA++ L+P D + K SF+K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPS 233
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 234 S-----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPRIITR 270
+IS M G V+ Q VVYY PR +
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PR--SG 322
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWR 329
T +F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR
Sbjct: 323 TPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWR 382
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 376
L+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 383 LLEVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 183/340 (53%), Gaps = 34/340 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAGP+V +P +V+YFPQGH E A+ + + +P +LCRV ++
Sbjct: 11 QLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVDFPSSPPVPAL-----VLCRVASLK 65
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
MA+ ETDEVYA+I L+P P+ K SF+K LT SD + GGFSV
Sbjct: 66 FMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPASFAKTLTQSDANNGGGFSV 125
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A PPLD + P Q +VA D+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 126 PRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 185
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMP---SSVIS------SQSMHL-------- 243
LVAGD+ VFLR ENG L VG+R R + P S +S S+ M +
Sbjct: 186 LVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMMNRNGDWRG 245
Query: 244 -------GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
VL A+ A + Q VVYY PR T +F + + A+ + GMR+K
Sbjct: 246 KGKLKAEAVLQAATLAASGQPFEVVYY-PR--ASTPEFCVKASSVKAAMRVPWCCGMRFK 302
Query: 297 MRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
M FE EDS F GTV V+ P W +S WR +++
Sbjct: 303 MAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLE 342
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 199/408 (48%), Gaps = 62/408 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----IPCRVEAIR 85
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGG 137
MA ETDEVYA++ L+P D + K SF+K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 198 SKRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPS 233
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 234 S-----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPRIITR 270
+IS M G V+ Q VVYY PR +
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PR--SG 322
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPHWKDSKWR 329
T +F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR
Sbjct: 323 TPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWR 382
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 376
L+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 383 LLEVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 172/352 (48%), Gaps = 43/352 (12%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
LW A AG +V +P+ +V+YFPQGH E N +IP F I CRV +I
Sbjct: 810 LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRY 864
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 138
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 865 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 924
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
S R A P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 925 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 984
Query: 199 KRLVAGDTFVFLRGENGELHVGVR--------CLA-----------------RQQSSMPS 233
K+L +GD+ VFLR ENGEL VG+ C A R+
Sbjct: 985 KKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKGNG 1044
Query: 234 SVISSQSMHLG------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNN 287
+IS M G V+ Q VVYY PR + T +F + + +
Sbjct: 1045 LLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYY-PR--SGTPEFFVKTSLIGITLQI 1101
Query: 288 KFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEP 338
++ GMR+KM E EDS F GTV V+ P W DS WR L+ + +P
Sbjct: 1102 RWCPGMRFKMPIETEDSSRISWFIGTVASVQAADPSWPDSLWRLLQPSFQQP 1153
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 205/401 (51%), Gaps = 54/401 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A + ++ R+P I CR+
Sbjct: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHNKVDFSKT----RVPPLIPCRIS 69
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS----PRPKVHSFSKVLTASDTS 133
+ MA+ ETDEVY ++ L P +NE + C + + K SF+K LT SD +
Sbjct: 70 AMKYMADPETDEVYVKMKLTPL-RENELDFEEDCFFGNNGLESQEKPASFAKTLTQSDAN 128
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 129 NGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWS 188
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHLG-- 244
FV K+LVAGD+ VFLR ENG+L VG+R + Q S SS + S G
Sbjct: 189 NFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLFGGV 248
Query: 245 --------------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISL 278
V+ + AV ++ VVYY PR T +F + +
Sbjct: 249 GSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYY-PR--ASTPEFCVKV 305
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 336
+ A+ ++ GMR+KM FE EDS F GT+ V P W DS WR L+V WD
Sbjct: 306 SSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVWD 365
Query: 337 EPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 376
EP + V+PW +E + S PN + P K+PR
Sbjct: 366 EPDLLQNVKCVNPWLVE--LVSNMPNFNLSPFTPPRKKPRF 404
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 207/403 (51%), Gaps = 57/403 (14%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E + +P+ + +LCRV+ I
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPIHPM---VLCRVLAIK 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
MA+ E+DEVYA++ L+P E +E D +S K SF+K LT SD +
Sbjct: 73 YMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNG 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 133 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNF 192
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------------- 226
V K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 193 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLRED 252
Query: 227 QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
+ +S+ S S + V+ A+ A++ + VVYY PR TS+F +
Sbjct: 253 ESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY-PR--ASTSEFCVKAVDA 309
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 381
+ RV+PW +E V++ V P+ L PR M +P
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLP 406
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ L Y+ L +L +MF IK + ++Y D G + G+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAGN 644
Query: 646 DPWHEFCNMVKRIFICSSQ 664
+P+ EF +R+ I + Q
Sbjct: 645 EPFSEFLKTARRLTILTEQ 663
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 201/394 (51%), Gaps = 48/394 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV+YFPQGH E + + + Q + + I C+V I
Sbjct: 25 QLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQ------ISAMIPCKVSAIK 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE--PTTPDPCP-----ADSPRPKVHSFSKVLTASDTS 133
+A+ ETDEVYA+I L+P ++ + D C + K SF+K LT SD +
Sbjct: 79 YLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 198
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---QQSSMPSSVISSQSMHLG------ 244
FV K+LVAGD+ VFLR +NG+L VG+R R + PS S G
Sbjct: 199 NFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSFGGYAAGFLREDE 258
Query: 245 --------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEA 284
V+ A+ A Q +VYY PR T +F + + A
Sbjct: 259 SKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYY-PR--ASTPEFCVRASAVRAA 315
Query: 285 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 342
+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 316 MQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLQ 375
Query: 343 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 376
RVSPW +E VA+ + P K+ R+
Sbjct: 376 NVKRVSPWLVE-LVANMPAVHLSPFSPPRKKLRI 408
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 567 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 626
SP + ++ L KV M+ VGR LDL+ L Y+ L +L MF+I+ ++
Sbjct: 489 SPSYKEHWKTDLGLETGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIE---NSD 545
Query: 627 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
++Y D G + GD+P+ EF +R+ I
Sbjct: 546 MLSSVLYRDAAGAIKRTGDEPFSEFLKTARRLTI 579
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 187/383 (48%), Gaps = 62/383 (16%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YF QGH E A P F R+P ILCRVV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPPLILCRVV 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLT 128
++ +A+ ETDEV+A+ITLLP P + D +P + K SF+K LT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP---------- 232
TTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRD 240
Query: 233 --SSVISSQSMHL-------------------GVLATASHAVATQTMFVVYYKPRIITRT 271
S+ +S+ M + V + F V Y PR T
Sbjct: 241 DESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPR--AST 298
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 329
+F + A+ + GMR KM FE EDS F GT V+ P W +S WR
Sbjct: 299 PEFCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNSPWR 358
Query: 330 SLKVQWDEPASITRPDRVSPWEI 352
L+V WDEP RVSPW +
Sbjct: 359 LLQVAWDEPDLXQNVKRVSPWLV 381
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + L +L EMF I+ + T + Y D G + +GD
Sbjct: 585 KVFMESEDVGRTLDLSVIGSVQELYRKLAEMFHIEERPDLVT--HVGYRDANGVIKRIGD 642
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 643 EPFSDFMKATKRLTI 657
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 198/409 (48%), Gaps = 54/409 (13%)
Query: 12 SSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSK 71
S+ D + +LW ACAG + VP G VYYFPQGH EQ + ++ R+P
Sbjct: 14 SAADDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDMP------RVPDL 67
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLP----EPSQN---EPTTPDPCPADSPRPKVHSFS 124
+ CRV + MA+ ++DEV+A+I LLP EP + +P D+ K SF+
Sbjct: 68 VPCRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPASFA 127
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LT SD + GGFSV R A P LD P Q + +D+HG E++F+HI+RG PR
Sbjct: 128 KTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPR 187
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGE---------NGELHVGVRCLARQQSSMPSSV 235
RHLLTTGWS FV K+L+AGD+ VFLR + + R PSS
Sbjct: 188 RHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSA 247
Query: 236 ISSQSMHLGVLATASHAVATQT-------------------------MFVVYYKPRIITR 270
S + G++ + + +F V Y PR
Sbjct: 248 ASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPR--AS 305
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 328
T +F + A+ ++ GMR+KM FE EDS F GTV GV P HW S W
Sbjct: 306 TPEFCVRAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPW 365
Query: 329 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRL 376
R L+V WDEP + RV PW +E + S+ PNL P + K+PR+
Sbjct: 366 RLLQVSWDEPELLQNVKRVCPWLVE--LVSSMPNLHLPSFSPPRKKPRI 412
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 642
+ KV ++ A+GR LDL+ L ++ L + +MFDI+ + + Y G++
Sbjct: 636 GQCKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIE---SAELRNNVHYRSAAGEVKN 692
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD+P+ F +R+ I
Sbjct: 693 VGDEPFRAFVKSARRLTI 710
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 186/389 (47%), Gaps = 63/389 (16%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP--SKILCR 75
L +LW ACAG +V +P +V+YFPQGH E + + LP S LCR
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHA--------CEPVDFRNLPGASHTLCR 70
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTA 129
V I MA+ ETDEV+A+I L+P S + + H SF+K LT
Sbjct: 71 VSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTLTQ 130
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV-------------- 235
TGWS FV K+LVAGD+ VFLR ENG+L VGVR R S P S+
Sbjct: 191 TGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVPYGG 250
Query: 236 ---ISSQSMHLGV--------------------------LATASHAVATQTMFVVYYKPR 266
S + H V + A+ A F Y PR
Sbjct: 251 FGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVYYPR 310
Query: 267 IITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWK 324
T +F + + + ++ GMR+KM FE EDS F GTV V+D P W
Sbjct: 311 --ANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADPLCWP 368
Query: 325 DSKWRSLKVQWDEPASITRPDRVSPWEIE 353
S WR L+V WDEP + RVSPW +E
Sbjct: 369 GSPWRLLQVTWDEPDLLQNVKRVSPWLVE 397
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV ++ VGR LDL L Y+ L +L +MF ++ ++ ++Y DD G +G+
Sbjct: 623 KVFLESEDVGRTLDLQLLESYEELYRKLADMFGLR---NSEKFSNLLYRDDNGITKHIGE 679
Query: 646 DPWHEFCNMVKRIFICS 662
+P+ F +R+ I +
Sbjct: 680 EPFSNFSKTARRLTIVT 696
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 177/277 (63%), Gaps = 6/277 (2%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 80
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 81 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 140
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
++S L +L++ + ++ +++F + + PR + S+FI+ + L+++N+ F+
Sbjct: 141 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR--SGASEFIVPYWRLLKSLNHPFS 198
Query: 291 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 349
+GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSP
Sbjct: 199 IGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSP 257
Query: 350 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
WEIE S + + + + +KR +L LD P
Sbjct: 258 WEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 292
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 177/277 (63%), Gaps = 6/277 (2%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 170
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 22 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 81
Query: 171 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 82 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 141
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
++S L +L++ + ++ +++F + + PR + S+FI+ + L+++N+ F+
Sbjct: 142 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR--SGASEFIVPYWRLLKSLNHPFS 199
Query: 291 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 349
+GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSP
Sbjct: 200 IGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSP 258
Query: 350 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
WEIE S + + + + +KR +L LD P
Sbjct: 259 WEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 293
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 185/353 (52%), Gaps = 44/353 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + G
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGG 128
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 129 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 188
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA--------- 247
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 189 NQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGK 248
Query: 248 ----------------------TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
AS A + Q VVYY PR T +F++ A+
Sbjct: 249 MMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PR--ASTPEFVVKAASVQNAM 305
Query: 286 NNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWD 336
N++ GMR+KM FE EDS F GT+ + P W +S WR L+V D
Sbjct: 306 RNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 157/246 (63%), Gaps = 6/246 (2%)
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + +A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFSI 121
Query: 262 YYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 321
Y PR +S FII +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPR--ASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179
Query: 322 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 380
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 180 VRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPI 236
Query: 381 PPLDLP 386
D P
Sbjct: 237 TKADFP 242
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 187/361 (51%), Gaps = 35/361 (9%)
Query: 5 LGSLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
L++P+ ++ R+LW ACAG + VP G VYYFPQGH E EL+
Sbjct: 4 FADLAEPAPGAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA- 62
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHS 122
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K S
Sbjct: 63 ---RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPAS 119
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGT 179
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C------------- 223
PRRHLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 180 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPG 239
Query: 224 ------LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIIS 277
L R +S ++ + L A+ F V Y PR T +F +
Sbjct: 240 WDQYGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPR--ASTPEFCVR 297
Query: 278 LNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQW 335
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V++
Sbjct: 298 AAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRY 357
Query: 336 D 336
+
Sbjct: 358 N 358
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 156/246 (63%), Gaps = 6/246 (2%)
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSI 121
Query: 262 YYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 321
Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPR--ASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179
Query: 322 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 380
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 180 VRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPI 236
Query: 381 PPLDLP 386
D P
Sbjct: 237 TKADFP 242
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 201/427 (47%), Gaps = 65/427 (15%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E + R+ S LCRV
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVDFRNLPRV------SHNLCRVS 72
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASD 131
+I MA+ ETDEV+A+I L+P S E A K SF+K LT SD
Sbjct: 73 DIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQSD 132
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 133 ANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLTTG 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV---------------- 235
WS FV K+L+AGD+ VF R ENG+L VGVR R P S+
Sbjct: 193 WSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVPSGGFG 252
Query: 236 ---------------------ISSQSMHLGVLATASHAVATQTM------FVVYYKPRII 268
S++S+ A + T+ F V Y PR
Sbjct: 253 AFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVYYPR-- 310
Query: 269 TRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF-SPHWKDS 326
T +F + + A+ ++ GMR+KM FE EDS F GTV V+ S W S
Sbjct: 311 ANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWWPHS 370
Query: 327 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDL 385
WR L+V WDEP + RVSPW +E +AS + P + PR + +P LD
Sbjct: 371 PWRLLQVTWDEPDLLQNVKRVSPWLVE--LASNMAAIHFPPFSS---PRKKLRLPQHLDF 425
Query: 386 PSAASAP 392
P P
Sbjct: 426 PIDGQFP 432
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
E++Q + + Q + L + KV M VGR LDL+ L Y+ L +L MF ++
Sbjct: 601 EELQWNKDKHQKSEPSLETGH--CKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLR- 657
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 662
++ ++Y D G +G++P+ +F +R+ I +
Sbjct: 658 --NSEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVT 696
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 198/366 (54%), Gaps = 42/366 (11%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL +LCRVV +
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKPSVLCRVVAVWF 70
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHSFSKVLTASDTS 133
+A+Q+TDEV+A+I L P E T + D KV SF K+LT+SD +
Sbjct: 71 LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG PRRHLLTTGWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMPSSVISSQSMHL 243
FV K+LVAGD+ VF+ R N EL +GVR AR +S++ +V + + +
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGSI 250
Query: 244 GVLATASHA------------VATQTM-FVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
+ +S +A Q M F V Y PR+ +S F++ EA++ +
Sbjct: 251 EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRV--GSSDFVVKAEVVEEALSVFWT 308
Query: 291 VGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 347
GMR KM E EDS + F GTV V D P W+ S WR L+V WDEP + RV
Sbjct: 309 GGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQVTWDEPEVLQNVMRV 367
Query: 348 SPWEIE 353
SPW++E
Sbjct: 368 SPWQVE 373
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 191/389 (49%), Gaps = 48/389 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E E + R+P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKV--EYFGKNHQTRVPPLIPCRLS 65
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKVHSFSKVLTA 129
+ MA+ +TDEVY ++ L P + D C ++ SF+K LT
Sbjct: 66 AMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKTLTQ 125
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 126 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLT 185
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------------- 226
TGWS FV KRLVAGD+ VFLR ENG+L VG+R +
Sbjct: 186 TGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGGGGF 245
Query: 227 ---QQSSMPSSVISSQSMHL-------GVLATASHAVATQTMFVVYYKPRIITRTSQFII 276
+SS S S + V+ + AV + VVYY PR + +F +
Sbjct: 246 LCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYY-PR--ASSPEFCV 302
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
+ A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V
Sbjct: 303 KASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVV 362
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNL 363
WDEP + V+PW +E T NL
Sbjct: 363 WDEPDLLQNVKCVNPWLVELVSNMPTFNL 391
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 192/389 (49%), Gaps = 76/389 (19%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLRGENGELHVGVR-------------------------------------- 222
LVAGD+ VF+R NG+L VG+R
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 223 ---CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFII 276
AR + + P V+ + ++ A + Q VVYY PR T +F +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PR--ASTPEFCV 305
Query: 277 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 306 KAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ-- 363
Query: 335 WDEPASITRPDRVSPWEIEPFVASATPNL 363
RVSPW +E + S+TP +
Sbjct: 364 --------NVKRVSPWLVE--LVSSTPAI 382
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 643
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 613 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 668
Query: 644 GDDPWHEFCNMVKRIFI 660
GD+P+ EF +R+ I
Sbjct: 669 GDEPFSEFTKTARRLTI 685
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 232/489 (47%), Gaps = 87/489 (17%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P G +V YFPQGH EQ AST + +P +P CRVV
Sbjct: 36 LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQ-AASTPEFPRTLVPNGSVP----CRVV 90
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD + GG
Sbjct: 91 SVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANNGGG 150
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 151 FSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 210
Query: 198 SK-----------RLVAGDTFVFLR----------------------------------- 211
K R+ +G+ V +R
Sbjct: 211 QKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWEVKGTE 270
Query: 212 ---------GENG-ELHVGVRCLARQQSSMPSSVISSQSMHL---GVLATASHAVATQTM 258
G+NG L+ +R + Q S +S + + VL A+ AV+ +
Sbjct: 271 SFSDFLGGVGDNGYALNSSIR--SENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERF 328
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 317
VVYY PR T++F + A+ + GMR+KM FE EDS F GT+ V+
Sbjct: 329 EVVYY-PR--ASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQ 385
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR- 375
P W S WR L+V WDEP + +RVSPW++E + + P + PV K+ R
Sbjct: 386 AADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLE--LVATLPMQLPPVSLPKKKLRT 443
Query: 376 -----LSMEVPP-LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 429
L ++ P L LP A ++ + LA SV +D + A H + +
Sbjct: 444 VQPQELPLQPPGLLSLPLAGTSNFGGHLATPWG---SSVLLDDASVGMQGARHDQFNGLP 500
Query: 430 S----NSNF 434
+ NSN+
Sbjct: 501 TVDFRNSNY 509
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 177/289 (61%), Gaps = 18/289 (6%)
Query: 111 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL------------DMNQST 158
C A+ H F K LTASDTSTHGGFSV R+ A +C PPL D
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVR 80
Query: 159 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 218
P+QEL+A DLHG +W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L
Sbjct: 81 PSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLR 140
Query: 219 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISL 278
+GVR + ++ ++S L +L++ + ++ +++F + + PR + S+FI+
Sbjct: 141 LGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPR--SGASEFIVPY 198
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 337
+ L+++N+ F++GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+
Sbjct: 199 WRLLKSLNHPFSIGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDD 257
Query: 338 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 386
+ +RVSPWEIE S + + + + +KR +L LD P
Sbjct: 258 STDSSHQNRVSPWEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 304
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 192/647 (29%), Positives = 273/647 (42%), Gaps = 109/647 (16%)
Query: 68 LPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSK 125
+P +LCRV+ I MA+ E+DEV+A++ L+P + + + ++ K SF+K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159
Query: 126 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 185
LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------------- 226
HLLTTGWS FV K+LVAGD+ VF+R E+G+L VG+R R
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279
Query: 227 ----------QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYYKPRIITRT 271
+ +S+ S S + V+ A+ A+ + VVYY PR T
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYY-PR--AST 336
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 329
S+F + A+ + GMR+KM FE EDS F GTV V P W +S WR
Sbjct: 337 SEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWR 396
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP------- 381
L+V WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 397 LLQVAWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNN 450
Query: 382 ---PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 438
+ +PS S P S L + V + R + H + SD + +++R
Sbjct: 451 LINSIPVPSFPSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRP 508
Query: 439 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 498
+ P SQ L ID +
Sbjct: 509 PPPPQPSALP---LSQPLGLRNIDS----------------------------------R 531
Query: 499 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 558
E G G N T S S V L IS G +D A
Sbjct: 532 NEKGFCFLTMGTTPCNDDTESKKSHIVLFGKLILPEEQIS-------EKGSTDTANTSGG 584
Query: 559 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 618
K + S KV M+ VGR LDL+ L Y+ L +L +MF
Sbjct: 585 SKLSSSEEGSPCSNKAHDAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFG 644
Query: 619 I-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
I K ++ + ++Y D G + G++P+ EF +R+ I + Q
Sbjct: 645 IQKAEMLS----SVLYRDASGAIKYAGNEPFSEFLKTARRLTIVTEQ 687
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 178/353 (50%), Gaps = 48/353 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + R+P + CRVV +
Sbjct: 22 QLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVD------LSSARVPPLVPCRVVAVR 75
Query: 81 LMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 76 FMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDAN 135
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 136 NGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWS 195
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG---- 244
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 196 PFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRR 255
Query: 245 ---------------------VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
VL A+ A Q V+YY PR T +F +
Sbjct: 256 NATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PR--ASTPEFCVRAAAVRT 312
Query: 284 AVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V
Sbjct: 313 AMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVH 365
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 180/351 (51%), Gaps = 43/351 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
V+ AS A + Q VVYY PR T +F++ A+
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PR--ASTPEFVVKAASVQNAM 308
Query: 286 NNKFAVGMRYKMRFEGEDSPE-RRFSGTVVG--VEDFSPHWKDSKWRSLKV 333
N++ GMR+KM FE EDS F GT+ V D + W +S WR L+V
Sbjct: 309 RNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQV 358
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 200/411 (48%), Gaps = 56/411 (13%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
W C G +V +P +V+YFPQG+ E TN + L R+P+ ILCRV +
Sbjct: 13 FWHVCTGSMVQIPPVNSKVFYFPQGYAEH--TFTNVDFTV---LARIPAMILCRVDAVKF 67
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 141
+A+ ETDEVYA+I L+P E D ++ +P F+K LT SD + GGFSV
Sbjct: 68 LADTETDEVYAKIRLIPV----EDFEDDSVVEETEKPAF--FAKTLTQSDANNGGGFSVP 121
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R A P LD P Q + AKD+HG W F+HI+RG PRRHLLT+GWS FV K+L
Sbjct: 122 RYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGWSAFVNKKKL 181
Query: 202 VAGDTFVFLRGENGELHVGVRCLARQQSSMPS--SVISSQSMHLGVLATASHAVATQTMF 259
VAG + VF++ EN EL VG+R + R P S S + G T +T
Sbjct: 182 VAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTEDENSSTNGNL 241
Query: 260 VVY---------YKPRIITRTS--------------------QFIISLNKYLEAVNNKFA 290
+ Y P + R S ++ + + A++ ++
Sbjct: 242 ISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASSVRAAMSVQWC 301
Query: 291 VGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 348
GMR+KM FE ED S F G++ V+ P W S WR L+V WDEP + V+
Sbjct: 302 SGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEPDLLQNVKSVN 361
Query: 349 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP---PLD----LPSAASAP 392
PW +E + S P++ L+ N PR + +P P D LPS + P
Sbjct: 362 PWLVE--LVSNMPDI---NLSHNSPPRKRLCLPQEFPFDGQFPLPSFSGNP 407
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 637
L ++ KV + VGR LDL+ L Y L L +MF+++ +L T+ ++Y D
Sbjct: 570 LGASTDHCKVFLDSEDVGRTLDLSVLGSYAELYKRLADMFEME-RLDMVTR--VLYLDAT 626
Query: 638 GDMMLVGDDPWHEFCNMVKRIFI 660
G +GD+P+ +F KR+ I
Sbjct: 627 GASKQIGDEPFSDFIKTAKRLTI 649
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/390 (37%), Positives = 194/390 (49%), Gaps = 53/390 (13%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEAS-TNQELNQRIPLFRLPSKILCRV 76
L +LW ACAG +V +P +V+YFPQGH E + NQ R+P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQT----RVPPLIPCRL 63
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC---------PADSPRPKV-HSFSKV 126
+ MA+ +TDEVY ++ L P + D C D + K SF+K
Sbjct: 64 SAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSFAKT 123
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD + P Q ++AKD+ G W+F+HI+RG PRRH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPRRH 183
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------------ 222
LLTTGWS FV KRLVAGD+ VFLR ENG+L VG+R
Sbjct: 184 LLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLFGG 243
Query: 223 -CLARQQSSMPSSVISSQSMHLG------VLATASHAVATQTMFVVYYKPRIITRTSQFI 275
L +S++ S M +G V+ + AV + VVYY PR + +F
Sbjct: 244 GFLCGSESNLMSG--GDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYY-PR--ASSPEFC 298
Query: 276 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 333
+ + A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V
Sbjct: 299 VKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQV 358
Query: 334 QWDEPASITRPDRVSPWEIEPFVASATPNL 363
WDEP + V+PW +E T NL
Sbjct: 359 VWDEPDLLQNVKCVNPWLVELVSNMPTFNL 388
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 205/409 (50%), Gaps = 41/409 (10%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+A AG V +P G RVYYFPQGH E ++ ++ +P F ILCRV+++
Sbjct: 15 VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMSPGMPAF-----ILCRVLSVRF 69
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 141
+AE +TDEVYA+I L P SQ+E + ++ SF K+LT SD + GGFSV
Sbjct: 70 LAESDTDEVYARIFLHPI-SQSEVDEVTMREEEVVEDEIVSFVKILTPSDANNGGGFSVP 128
Query: 142 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 201
R A P LD P Q L +D+ G W F+HI+RG PRRHLLTTGWS FV SK+L
Sbjct: 129 RFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKQL 188
Query: 202 VAGDTFVFL-RGENGELHVGVRCLARQQSS---MPSSVISSQSMHLGVLATASHAVATQT 257
VAGD+ VF+ R N +L+VGVR R+ SS + + ++ G S +
Sbjct: 189 VAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDVSWGIRKGR 248
Query: 258 M-----------------FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M F V PR + F++ + A+N + VGMR KM E
Sbjct: 249 MTMEAVAAVAEKAARGVPFEVSCYPR--DAWAGFVVKAQEVQMALNMPWTVGMRVKMAVE 306
Query: 301 GEDSPERR-FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
EDS + GTV V + S W+ S WR L++ W+EP +RV+PW++E F
Sbjct: 307 AEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVECF--- 363
Query: 359 ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 407
P + + P +++P LP +P+ S +T L
Sbjct: 364 -------PPIPQFLPPSKKIKLPNGLLPDGERSPFPMTGLGSFPMTGLG 405
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 116/152 (76%), Gaps = 11/152 (7%)
Query: 2 ANRLGSLSQPSSNS----------DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQL 51
ANR+ S Q NS D LY E WKACAGPLVDV K G+RVY FPQGHMEQL
Sbjct: 3 ANRV-SFGQQQQNSNFSGQGNGVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQL 61
Query: 52 EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC 111
EASTNQELNQRIP+F LP KILCRV NI L+AEQ+TDEVYAQITL+PE Q EP +PD C
Sbjct: 62 EASTNQELNQRIPMFNLPPKILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPISPDSC 121
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 143
P + P+P VHSF KVLTASDTSTHG FSVLRK
Sbjct: 122 PEEPPKPDVHSFCKVLTASDTSTHGEFSVLRK 153
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 200/373 (53%), Gaps = 32/373 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ACAG V +PK RVYYFPQGHME AS + L+ PL R + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLS---PLIRSLPFVPCHVSSLD 66
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK-------VHSFSKVLTASDT 132
+A+ +DEV+A+ L P SQ +P D A + V SF+K+LT SD
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDA 126
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
+ GGFSV R A C PPLD P Q L D+HG EWRF+HI+RG PRRHL TTGW
Sbjct: 127 NNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGW 186
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---------SVISSQSMHL 243
S FV K+LVAGDT VF++ +G + VG+R AR +++ + S ++ +
Sbjct: 187 SKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTGRVTA 246
Query: 244 GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 303
+A A+ + A F V Y PR T + F++S E++ + GMR K+ E ED
Sbjct: 247 EAVAAAAESAARNAPFEVVYYPR--TGFADFVVSAEVVEESMKCAWVGGMRVKISMETED 304
Query: 304 SPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
S + GTV + ++ WR L+V WDEP + +VSPW++E + P
Sbjct: 305 SSRMTWYQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKQVSPWQVE---LVSPPF 357
Query: 363 LVQPVLAKNKRPR 375
+ V + NKR R
Sbjct: 358 ALHTVFSPNKRLR 370
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 150/213 (70%), Gaps = 6/213 (2%)
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPR--ASPSEFVIPLVKYVK 118
Query: 284 AV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASI 341
AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE +
Sbjct: 119 AVYHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAG 178
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
R RVS WEIEP + P P + KRP
Sbjct: 179 ERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 150/213 (70%), Gaps = 6/213 (2%)
Query: 164 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 223
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 224 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE 283
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPR--ASPSEFVIPLVKYVK 118
Query: 284 AV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASI 341
AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE +
Sbjct: 119 AVYHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAG 178
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
R RVS WEIEP + P P + KRP
Sbjct: 179 ERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 618 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 677
Query: 653 NMVKRIFICSSQDVKKM 669
+ V I I S Q+V++M
Sbjct: 678 STVSCIKILSPQEVQQM 694
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 199/391 (50%), Gaps = 49/391 (12%)
Query: 14 NSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL 73
N+ L +LW+A AG V +P RVYYFPQGHM+Q A++ + L R IL
Sbjct: 12 NASSLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQ--ATSLPNNLSPLLLSR--PYIL 67
Query: 74 CRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 131
C V +H +A+ +TDEV+A++ L P + + N P P D R + SF+K+LT SD
Sbjct: 68 CSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGER--ISSFAKILTPSD 125
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A PPLD + P Q L+ D+HG W F+HI+RG PRRHLLTTG
Sbjct: 126 ANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTG 185
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-----GVL 246
WS FV +K+LVAGD+ VF++ G + +G+R R + SS + S L GV
Sbjct: 186 WSKFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVR 245
Query: 247 -------------ATASHA--------------VATQTM-FVVYYKPRIITRTSQFIISL 278
A + H +A Q M F V Y PR S F++
Sbjct: 246 SRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPR--AGWSDFVLKA 303
Query: 279 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQW 335
A++ + GMR KM E +DS F G V V V D W+ S WR L + W
Sbjct: 304 EVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHG-AWRGSPWRMLHITW 362
Query: 336 DEPASITRPDRVSPWEIEPFVASATPNLVQP 366
DEP + VSPW++E + S TP+L P
Sbjct: 363 DEPEVLQTSKWVSPWQVE--LLSTTPSLHTP 391
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 189/369 (51%), Gaps = 48/369 (13%)
Query: 5 LGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIP 64
L +L + S+ LW+ACAG +V +P V YFPQGH E A N E +
Sbjct: 3 LQNLLMADNKSNCFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEH--AGVNVEFRSDV- 59
Query: 65 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPK 119
++PS I CRV +I MAE+ETDEV+A+I L P TP+ +D+ R K
Sbjct: 60 --KIPSYIPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSR-K 116
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
SF+K LT SD + GGFSV + A P LD N + P Q L A D+HG W+F+HI+
Sbjct: 117 PLSFAKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIY 176
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-------- 231
RG P RHLLTTGWSTFV K+LVAGD+ VFLR EN ++ +G+R + ++ +M
Sbjct: 177 RGTPERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWW 236
Query: 232 -PS-------------------------SVISSQSMHLGVLATASHAVATQTMFVVYYKP 265
PS S+I+ ++ + A+ F V + P
Sbjct: 237 FPSVGNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYP 296
Query: 266 RIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWK 324
+ + T +F + ++ A+ + GMR+KM FE ED F GT+ V+ P W
Sbjct: 297 Q--STTPEFFVKASRVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWP 354
Query: 325 DSKWRSLKV 333
DS WR L+V
Sbjct: 355 DSPWRMLQV 363
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 169/329 (51%), Gaps = 40/329 (12%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGG 131
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------ 243
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 244 ------------------GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
V+ AS A + Q VVYY PR T +F++ A+
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PR--ASTPEFVVKAASVQNAM 308
Query: 286 NNKFAVGMRYKMRFEGEDSPERR-FSGTV 313
N++ GMR+KM FE EDS F GT+
Sbjct: 309 RNQWCPGMRFKMAFETEDSSRISWFMGTI 337
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 178/341 (52%), Gaps = 38/341 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG + VP G VYYFPQGH EQ A+ + + +P+ + CRV +
Sbjct: 23 QLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVD------LSAACVPALLPCRVSAVR 76
Query: 81 LMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
MA+ +DEV+A+I L+P +P+ + RPK SF+K LT SD + G
Sbjct: 77 FMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQDDRPKPASFAKTLTQSDANNGG 136
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q +V +D+HG E++F+HI+RG PRRHLLTTGWS FV
Sbjct: 137 GFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRHLLTTGWSNFV 196
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL---------A 247
K+L+AGD+ VFLR + GE+HVGVR R + S + G++ A
Sbjct: 197 NQKKLLAGDSIVFLRSDGGEVHVGVR---RAKRVFCDEGHSGWDHYRGLMRGGNAGSGDA 253
Query: 248 TASHAVATQTM------------FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
A V + + F V Y PR T +F + A+ ++ GMR+
Sbjct: 254 AAKGKVPAEDVVAAARLAAAGQPFEVVYYPR--ASTPEFCVRAGAVRAAMQVQWRPGMRF 311
Query: 296 KMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 334
KM FE EDS F GTV G+ P W S WR L+V+
Sbjct: 312 KMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR 352
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 181/364 (49%), Gaps = 58/364 (15%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQ-----ELNQRIPLFRLPSKILCR 75
+LW ACAG +V +P RVYYF QGH E + EL R LP +LCR
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRA----LPPLVLCR 71
Query: 76 VVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKV 126
V + +A++++DEVYA+I L P P + E PD CP A P P K SF+K
Sbjct: 72 VEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKT 131
Query: 127 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 186
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 132 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 191
Query: 187 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-- 244
LLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 192 LLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGG 251
Query: 245 ---------------------------------VLATASHAVATQTMFVVYYKPRIITRT 271
V+ AS A + Q V YY PR T
Sbjct: 252 GFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PR--AST 308
Query: 272 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-WKDSKWR 329
F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR
Sbjct: 309 PDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWR 368
Query: 330 SLKV 333
L+V
Sbjct: 369 LLQV 372
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 190/393 (48%), Gaps = 44/393 (11%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
PS++ + R +W+ACAG V +P RVYYFPQGH+EQ S++ + + L
Sbjct: 6 HPSADLRRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALS 65
Query: 70 SKIL-CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP-----------DPCPADSPR 117
++ C++ + +A+ TDEVY ++ L P S N P+ P D
Sbjct: 66 KPVIPCQISAVQFLADPVTDEVYTKLLLFPIDSFN-PSVPVLEHSGNLEQHHGYDYDDDE 124
Query: 118 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
K+ +F+K+LT SD + GGFSV R A PPL+ + P Q L D+HG W F+H
Sbjct: 125 DKIVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRH 184
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------- 222
I+RG PRRHLLTTGWS FV K+L+AGD+ VF+R G++ +GVR
Sbjct: 185 IYRGTPRRHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARW 244
Query: 223 -----CLARQQSSMPSSVISSQSMHLGVLATASHAV-------ATQTMFVVYYKPRIITR 270
C + V G + AV A F V Y PR
Sbjct: 245 REQIACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPR-AGW 303
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKW 328
S F++ + A+ ++ GMR KM E EDS F GT+ W+ S W
Sbjct: 304 YSDFVVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPW 363
Query: 329 RSLKVQWDEPASITRPDRVSPWEIEPFVASATP 361
R L+V WDEP + RVSPW++E +V+ + P
Sbjct: 364 RMLQVAWDEPEVLQNAKRVSPWQVE-YVSPSPP 395
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 187/339 (55%), Gaps = 22/339 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
+++W+ CAG V +PK VYYFP GH+E + S N N L R ILC V +
Sbjct: 10 QKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNP--NTLSHLDRSRPFILCTVSAV 67
Query: 80 HLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L+A+ TDEV+ ++ L P ++ +EP + + KV S+SK LT SD + G
Sbjct: 68 DLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSDANNGGA 127
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV + A PPLD+N P QEL D+HG W+F+H++RG P RHLLTT WS FV
Sbjct: 128 FSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTDWSEFVD 187
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV-LATASHAVATQ 256
KRLV GD+ +F++ +G + VGVR RQ ++ I+ +S V LA + A
Sbjct: 188 KKRLVGGDSLIFMKDSDGNISVGVR---RQTKFGGAAKITEKSFTEAVELADKNLAFE-- 242
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVV 314
VVYY F++ +A+N +++G+R ++ + DS +R +F GT+
Sbjct: 243 ---VVYYP--TAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEGTIS 297
Query: 315 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ +P + WR L+V+WDEP P+RVSPWE+E
Sbjct: 298 ALS--AP---NCPWRMLEVKWDEPKVSQVPERVSPWEVE 331
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 196/395 (49%), Gaps = 71/395 (17%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL +LCRVV +
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKPSVLCRVVAVWF 70
Query: 82 MAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHSFSKVLTASDTS 133
+A+Q+TDEV+A+I L P E T + D KV SF K+LT+SD +
Sbjct: 71 LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG PRRHLLTTGWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMPSSVISSQSMHL 243
FV K+LVAGD+ VF+ R N EL +GVR AR +S++ +V + + +
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGSI 250
Query: 244 GVLATASHAVAT------------QTM-FVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
+ +S Q M F V Y PR+ +S F++ EA++ +
Sbjct: 251 EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRV--GSSDFVVKAEVVEEALSVFWT 308
Query: 291 VGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSL---------------- 331
GMR KM E EDS + F GTV V D P W+ S WR L
Sbjct: 309 GGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQTWSYLQDTKMRSLIV 367
Query: 332 -------------KVQWDEPASITRPDRVSPWEIE 353
KV WDEP + RVSPW++E
Sbjct: 368 TFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 190/369 (51%), Gaps = 35/369 (9%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
++ +LW ACAGP VP G VYYFPQGH E A+ + L+ P + CRV
Sbjct: 33 VHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANLHA-------PPFVPCRVA 85
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPKVHSFSKVLTA 129
+ MAE +TDE++ +I L P S EP T D P V S +K LT
Sbjct: 86 GVRFMAELDTDEIFVKIRLDPLRS-GEPLTDVGEAQVVNDEAGQRQPTRPVISSAKTLTK 144
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
SD+ + G SV R A P LD + P Q + A+D+HG EW F+H++RG P R+LLT
Sbjct: 145 SDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNLLT 204
Query: 190 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSSVISSQSMHLGVLA 247
TGWS FV SK++V GD+ VFLR E+G +H+G+R R ++++ ++ + G A
Sbjct: 205 TGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGAAA 264
Query: 248 TA-----------SHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
A F V + PR F + + +EA+ + G+R+K
Sbjct: 265 DGVLRAEDVVAAAVTLAAAGNPFEVVHYPRAT--APAFCVRVATVIEALQVSWCPGLRFK 322
Query: 297 MRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 354
M FE +D S F GTV GV P W S WR L+V WDEP + +R+SPW++E
Sbjct: 323 MAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE- 381
Query: 355 FVASATPNL 363
+ + PNL
Sbjct: 382 -LVATMPNL 389
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 188/379 (49%), Gaps = 45/379 (11%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
LW CAG V++P RVYYFPQGH +Q +S + L+ PL +LCRV ++
Sbjct: 20 LWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLS---PLLLSKPAVLCRVESVQF 75
Query: 82 MAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
+A+ TDEV+A++ L P A + V SFSKVLTASD +
Sbjct: 76 LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A PPL+ P Q L+ D+HG+ W F+HI+RG PRRHLLTTGWSTF
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTF 195
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHL----- 243
V +K+LVAGD VF++ G L VG+R R + M V +
Sbjct: 196 VNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEEEEEEE 255
Query: 244 ------------GVLATASHAVATQTM-----FVVYYKPRIITRTSQFIISLNKYLEAVN 286
G L+ A A + F V Y P+ R S+F++ EA+
Sbjct: 256 EEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPK--ERWSEFVVKTEAVNEAMK 313
Query: 287 NKFAVGMRYKMRFEGEDSPERRFS-GTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRP 344
++ G+R K+ E +DS + GTV V + W+ S WR L+V WDEP +
Sbjct: 314 VAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEGLQIA 373
Query: 345 DRVSPWEIEPFVASATPNL 363
VSPW++E + S TP L
Sbjct: 374 KWVSPWQVE--LVSTTPAL 390
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 131/215 (60%), Gaps = 18/215 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW+ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WSTFV K+L+AGD+ VFLR E GEL VG+R R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKR 215
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVV 314
Q VVYY PR T +F + + A+ ++ GMR+KM FE EDS F GTV
Sbjct: 288 QAFEVVYY-PR--ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVS 344
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNK 372
V+ P W +S WR L+V WDEP + RVSPW +E + S P + + P
Sbjct: 345 AVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF----- 397
Query: 373 RPRLSMEVP-PLDLP 386
PR + +P P D P
Sbjct: 398 SPRKKLRIPQPFDFP 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 187/381 (49%), Gaps = 49/381 (12%)
Query: 11 PSSNSDDLYR----ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
P S D++R ++W+ACAG V +P RVYY+PQGH+E S++
Sbjct: 3 PPSAIADVHRVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSA--------- 53
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPKVHSFS 124
S I C V +I L+A+ TDEV+A +TL P +Q++ P + KV +F+
Sbjct: 54 VTASPIACVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFA 113
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
KVLTASD + GGFSV R A PPLD P Q+L D+HG W F+HI+RG PR
Sbjct: 114 KVLTASDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPR 173
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 244
RHLLTTGWS FV SK+L+ GD+ VF+R E+ +GVR S SS + G
Sbjct: 174 RHLLTTGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGG 233
Query: 245 VLAT---------------------ASHAVATQTM---FVVYYKPRIITRTSQFIISLNK 280
S A+ + F V Y P S+F++
Sbjct: 234 YYGVKKEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYP--TAGWSEFVVRAED 291
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 339
+ N + G R KM E EDS F G V S ++++ W+ L++ WDEP
Sbjct: 292 VEASTNVYWTPGTRVKMAMETEDSSRITWFQGIV------SATFQET-WKQLQITWDEPE 344
Query: 340 SITRPDRVSPWEIEPFVASAT 360
+ RV+PW++E AS+T
Sbjct: 345 ILQNLKRVNPWQVEAVTASST 365
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 129/211 (61%), Gaps = 18/211 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
WSTFV K+L+AGD+ VFLR E G+L VG+R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIR 211
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 317
F V Y PR T +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 FEVVYYPR--ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 347
Query: 318 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 375
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 348 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 400
Query: 376 LSMEVP-PLDLP 386
+ +P P D P
Sbjct: 401 KKLRIPQPFDFP 412
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 646 DPWHEFCNMVKRIFI 660
+P+ +F KR+ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 138/212 (65%), Gaps = 10/212 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQL------EASTNQELNQRIPLF-RLPSKIL 73
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++++ +P + LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 74 CRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDT 132
C + ++L A+ +TDEVYAQ+TL P + E RP++ F K LTASDT
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLTASDT 163
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
STHGGFSV R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGW 223
Query: 193 STFVTSKRLVAGDTFVFLR--GENGELHVGVR 222
S FV+ KRL AGD+ + +R ++ ++ +G+R
Sbjct: 224 SLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 448 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
P F+Q Q+F++A+ D + P++S NND LL +TE
Sbjct: 811 PSSNFNQHQMFKDALPDVEMEGVDPSNSCLF-----GINNDNLLG---FPIETEDLLINA 862
Query: 507 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 863 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 914
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 915 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 973
Query: 623 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 974 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1023
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 287 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR 346
N+ ++GMR++M FE E+ RR+ GT+ G+ D P V WDE A+ R +R
Sbjct: 248 NQISLGMRFRMMFETEELGTRRYMGTITGISDLDP-----------VGWDESAAGERRNR 296
Query: 347 VSPWEIEPFVASATPNLVQPVLAKNKRPR 375
VS WEIEP VA+ QP KRPR
Sbjct: 297 VSIWEIEP-VAAPFFLCPQPFFGV-KRPR 323
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 130/215 (60%), Gaps = 18/215 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF---RLPSKILCRVV 77
+LW+ACAG +V +P V+YFPQGH E A P F R+P ILCRV
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPPLILCRVA 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASD 131
++ +A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A P LD P Q ++AKD+HG +F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WSTFV K+L+AGD+ VFLR E GEL VG+R R
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKR 215
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 256 QTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVV 314
Q VVYY PR T +F + + A+ ++ GMR+KM FE EDS F GTV
Sbjct: 288 QAFEVVYY-PR--ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVS 344
Query: 315 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNK 372
V+ P W +S WR L+V WDEP + RVSPW +E + S P + + P
Sbjct: 345 AVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF----- 397
Query: 373 RPRLSMEVP-PLDLP 386
PR + +P P D P
Sbjct: 398 SPRKKLRIPQPFDFP 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 646 DPWHEFCNMVKRIFI---CSSQDVKK 668
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 196/384 (51%), Gaps = 43/384 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAGP V+VPK +VYYFP GH+E S N + I + PS C + +
Sbjct: 12 KIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYG-PS-FPCIITAVD 69
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L+A+ TDEV+A++ L P Q P D D K SF K LT SD++ GGFS
Sbjct: 70 LLADPHTDEVFAKLLLSPVTEGQEFPEVVDE--EDDGGDKFVSFVKTLTKSDSNNGGGFS 127
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R A P LD+N P+Q+L D+H W+F H++RG+P+RHL TTGW+ FV +K
Sbjct: 128 VPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPFVNTK 187
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS-----------------SQSMH 242
+LVAGD+ VF++ G++ VG+R + ++ +V + S+
Sbjct: 188 KLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFSRGGR 247
Query: 243 LGVLATASHAVATQ-----TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
G+L + A + F V Y PR F++ N +A+ +A GMR K+
Sbjct: 248 RGMLTEKAVIEAVELAEKNLAFEVIYYPR--ANWCNFVVDANVVDDAMKIGWASGMRVKL 305
Query: 298 RFEGEDSPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 352
+ ++S + + GT+ V WR L+V WDE + +RV+PW++
Sbjct: 306 PLKIDESSNSKMTFFQPQGTISNVSSV------PNWRMLQVNWDELEILQNQNRVNPWQV 359
Query: 353 EPFVASATPNLVQPVLAKNKRPRL 376
E + S TP + P L+ K+PRL
Sbjct: 360 E--LISHTPAVHLPFLS-TKKPRL 380
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRV 76
L ++LW+ACAG +V +P G ++ YFPQGH EQ +S + P P+ + CRV
Sbjct: 38 LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPD------FPRALGPAGTVPCRV 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+++ +A++ETDEV+A + L PE +E P+ SP K SF+K LT SD + G
Sbjct: 92 LSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPE-KPASFAKTLTQSDANNGG 150
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 151 GFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 210
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVR 222
K+LVAGD VFLR +GEL VGVR
Sbjct: 211 NHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VL A+ A + + VVYY PR T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYY-PR--ASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDS 367
Query: 305 PERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
F GT+ V+ P W S WR L+V WDEP + RVSPW++E + S P
Sbjct: 368 SRISWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--LVSTLP- 424
Query: 363 LVQPVLAKNKRPRLSMEVPPLDLP 386
M++PP LP
Sbjct: 425 ---------------MQLPPFSLP 433
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 544 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
DS D+ KKQ V S K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GDSGHGGDVGGSKWLKKQASVLSSEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
YD L +L +F + + +VY D EG + G +P+
Sbjct: 692 GSYDELYKQLAAVFCVD---VAKISGRVVYKDSEGSTIHTGGEPY 733
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 193/401 (48%), Gaps = 66/401 (16%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +R+ +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHRQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP---------D 109
PL LPS + C + +I L+A+ TDEV+A + L +P E TP D
Sbjct: 50 CPLISTLPSSTSPVPCLITSIQLLADPITDEVFAHLVL--QPVTQEQFTPTNYSRFGRYD 107
Query: 110 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 169
D+ KV +F+K+LT SD + GGFSV R A PPLD P Q+L D+H
Sbjct: 108 GDVDDNN--KVTTFAKILTPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIH 165
Query: 170 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------- 222
G W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF++ E+ +GVR
Sbjct: 166 GAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSS 225
Query: 223 -------------------CLARQQSSMPSSVI---SSQSMHLGVLATASHAVATQTMFV 260
+A++ + + A + A F
Sbjct: 226 GGGSSYYGGDEYNGYYSQSSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFE 285
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 319
V Y P S+F++ +++ + G R KM E EDS F G V
Sbjct: 286 VAYYP--TAGWSEFVVRAEDVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQE 343
Query: 320 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
+ W+ S W+ L++ WDEP + RV+PW++E VA+AT
Sbjct: 344 TGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE-IVANAT 383
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRV 76
L ++LW+ACAG +V +P G ++ YFPQGH EQ +S + P P+ + CRV
Sbjct: 38 LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPD------FPRALGPAGTVPCRV 91
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-KVHSFSKVLTASDTSTH 135
+++ +A++ETDEV+A + L PE +E D A SP P K SF+K LT SD +
Sbjct: 92 LSVKFLADKETDEVFASLRLHPESGSDEDN--DRAAALSPSPEKPASFAKTLTQSDANNG 149
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 150 GGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 209
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR 222
V K+LVAGD VFLR +GEL VGVR
Sbjct: 210 VNHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
VL A+ A + + VVYY PR T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYY-PR--ASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDS 367
Query: 305 PERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
F GT+ V+ P W S WR L+V WDEP + RVSPW++E
Sbjct: 368 SRISWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--------- 418
Query: 363 LVQPVLAKNKRPRLSMEVPPLDLP 386
LV L M++PP LP
Sbjct: 419 LVS---------TLPMQLPPFSLP 433
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 544 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 603
+S D+ KKQ V K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GESGHGGDVGGSKWLKKQASVLSWEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 604 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS- 662
YD L +L +F + + +VY D EG + G +P+ F V+R+ I +
Sbjct: 692 GSYDELYKQLATVFCVD---MAKISGRVVYKDSEGSTIHTGGEPYANFVKSVRRLTILAD 748
Query: 663 SQD 665
+QD
Sbjct: 749 TQD 751
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 187/396 (47%), Gaps = 69/396 (17%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR- 117
PL LPS + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRF 103
Query: 118 ----------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D
Sbjct: 104 GRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTD 163
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR----- 222
+HG W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 164 IHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPIS 223
Query: 223 ---------------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM- 258
+A++ P + A+ A+Q +
Sbjct: 224 SSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLP 283
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 317
F V + P S+F++ +++ + G R KM E EDS F G V
Sbjct: 284 FEVVFYP--AAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTY 341
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ W+ S W+ L++ WDEP + RV+PW++E
Sbjct: 342 QETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 187/396 (47%), Gaps = 69/396 (17%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR- 117
PL LPS + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRF 103
Query: 118 ----------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D
Sbjct: 104 GRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTD 163
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR----- 222
+HG W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 164 IHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPIS 223
Query: 223 ---------------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM- 258
+A++ P + A+ A+Q +
Sbjct: 224 SSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLP 283
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 317
F V + P S+F++ +++ + G R KM E EDS F G V
Sbjct: 284 FEVVFYP--AAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTY 341
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+ W+ S W+ L++ WDEP + RV+PW++E
Sbjct: 342 QETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 189/392 (48%), Gaps = 61/392 (15%)
Query: 8 LSQPSSNSDDL-YRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
+S PS+ + D+ +RE +W+ACAG V +P RVYYFPQGH+E
Sbjct: 1 MSPPSATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC----------- 49
Query: 63 IPLFR-LPSK---ILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTP------DPC 111
PL LPS + C + +I L+A+ TDEV+A + L P Q PT D
Sbjct: 50 CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGD 109
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
D+ KV +F+K+LT SD + GGFSV R A P L+ P Q+L D+HG
Sbjct: 110 VDDNN--KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGA 167
Query: 172 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------- 222
W F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 168 VWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDG 227
Query: 223 -----------------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVY 262
+A++ P + A+ A+Q + F V
Sbjct: 228 GSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVV 287
Query: 263 YKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 321
+ P S+F++ +++ + G R KM E EDS F G V +
Sbjct: 288 FYP--AAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETG 345
Query: 322 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
W+ S W+ L++ WDEP + RV+PW++E
Sbjct: 346 PWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 184/384 (47%), Gaps = 54/384 (14%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
R G+ ++P D++ LW+ACAG + VP G VYYFPQGH E + ++ R+
Sbjct: 34 RRGAAAEPRGRDVDVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEH---AGGAAVDLRV 90
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR-- 117
P F + CRV + LMA+ +TD+VYA+I L+P EP + S R
Sbjct: 91 PPF-----VPCRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGG 145
Query: 118 ----------------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 161
P+ SF+K LT SD + GGFSV R A P LD + S P Q
Sbjct: 146 ADGDGDGDAGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQ 205
Query: 162 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 221
+ A+D+HG EW F+HI+R PRR LL G +KR VF R G + GV
Sbjct: 206 FVSARDVHGVEWTFRHIYRSTPRRTLLNPG-CRLRRAKR-------VFCRRGGGGSNAGV 257
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
+P+ V+ A A A Q VV+Y PR +F++
Sbjct: 258 AVAGPSDGKVPAE---------DVVEAARLAAAGQPFEVVHY-PR--ASAPEFVVRAAAV 305
Query: 282 LEAVNNKFAVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
E++ + G+R+KM FE ED S F GT+ GVE P W S WR L+V WDEP
Sbjct: 306 KESMQAPWCPGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPE 365
Query: 340 SITRPDRVSPWEIEPFVASATPNL 363
+ +RV PW +E + S+ P L
Sbjct: 366 LLRNVNRVCPWRVE--LVSSMPKL 387
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 541 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 600
S+ +D G SD++ KK S S + KV ++ +GR LDL
Sbjct: 569 SSTSDRSG-SDVSHGSPAKKNSPSLTLWWSGDSSLSAFALEPGQCKVFVESDTLGRNLDL 627
Query: 601 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+ L ++ L L F I + + +VY G++ VGD+P+ F +RI I
Sbjct: 628 SALSSFEELCARLSSFFGIN---NADLRSHMVYRTIAGEVKHVGDEPFSVFVKSARRITI 684
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 180/368 (48%), Gaps = 35/368 (9%)
Query: 8 LSQPSSNSDDLYRE----LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
+S P S + D RE +W+ACAG V +P RVYYFPQGH+E S+ I
Sbjct: 1 MSPPPSATADFLREVDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSS------LI 54
Query: 64 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTT--------PDPCPAD 114
F + + C V + L+A+ TDEV+A + L P P P+ D ++
Sbjct: 55 SSFSTAAPVPCVVSAVELLADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNSN 114
Query: 115 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 174
S + KV +F+K+LT SD + GGFSV R A PPLD + P Q+L D+HG W
Sbjct: 115 SNKNKVVTFAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWD 174
Query: 175 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---CLARQQSSM 231
F+HI+RG PRRHLLTTGWS FV K+L+AGD+ VF+R E+ +GVR
Sbjct: 175 FRHIYRGTPRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYY 234
Query: 232 PSSVISSQSMHLGVLA------TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAV 285
+ + +G L + AV VVYY S F++ +
Sbjct: 235 GGGKKGFRRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYP---TAGWSDFVVRAEDVEVFM 291
Query: 286 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 345
++ G R KM E EDS + VV S + W+ L++ WDEP +
Sbjct: 292 AGYWSPGTRVKMAMETEDSSRVTWFQGVVS----STFQETGLWKQLQITWDEPEILQNLK 347
Query: 346 RVSPWEIE 353
RV+PW++E
Sbjct: 348 RVNPWQVE 355
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 135/214 (63%), Gaps = 12/214 (5%)
Query: 72 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------H 121
+ CRVV+++L A+ DEVYAQ+ L+P+ Q E D AD+ + H
Sbjct: 30 VFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTTPH 89
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 90 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIYRG 149
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
QPRRHLLTTGWS FV K+LV+GD +FLR +GEL +GVR A+ ++ SQ +
Sbjct: 150 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSNYLAPYSQLL 209
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFI 275
++ + +A++++ F + Y PR +S FI
Sbjct: 210 NVSGIVDVVNAISSRNAFNICYNPR--ASSSDFI 241
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 6/203 (2%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RVYYFPQGH E + + +L P R+P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 201 LVAGDTFVFLR-GENGELHVGVR 222
LVAGD+ VF+R G G+L VG+R
Sbjct: 199 LVAGDSIVFMRTGGTGDLCVGIR 221
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 287 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 344
++ GMR+KM FE EDS F GTV V+ P W +S WR L+V WDEP +
Sbjct: 314 TQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNV 373
Query: 345 DRVSPWEIEPFVASATPNL 363
RVSPW +E + S+TP +
Sbjct: 374 KRVSPWLVE--LVSSTPAI 390
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 643
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 621 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 676
Query: 644 GDDPWHEFCNMVKRIFI 660
GD+P+ EF +R+ I
Sbjct: 677 GDEPFSEFTKTARRLTI 693
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 131/210 (62%), Gaps = 9/210 (4%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +V+YFPQGH E +A+ + + RIP I CRV+ +
Sbjct: 11 QLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPL-----IPCRVLAVK 65
Query: 81 LMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
+A+ ETDEV+A + ++P P+ + E +++ K SF+K LT SD + G
Sbjct: 66 FLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLTQSDANNGG 125
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 126 GFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 185
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
K+LVAGD+ VFLR +NG+L VG+R R
Sbjct: 186 NQKKLVAGDSIVFLRSKNGDLCVGIRRAKR 215
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 194/449 (43%), Gaps = 62/449 (13%)
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V+ A+ A + Q VVYY PR T +F + + A+ ++ GMR+KM FE EDS
Sbjct: 278 VMEAAALAASGQPFEVVYY-PR--ASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDS 334
Query: 305 PERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 362
F GT+ V+ P W +S WR L+V WDEP + RVSPW +E + S P
Sbjct: 335 SRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMP- 391
Query: 363 LVQPVLAKNKRPRLSMEVPPL-DLPSAASAPWSARLAQSHNL---TQLSVTAEDKRIDNH 418
++Q L+ PR +P D P + P S+ + S+ L + + +++ +
Sbjct: 392 VIQ--LSPFSPPRKKFRLPQHPDFPLDSQFPLSSSFS-SNTLRPSSPMCCLSDNTSVGIQ 448
Query: 419 VAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST 478
A H + S+ + ++ Q + ++ F ++ ++ D+++ S+
Sbjct: 449 GARHTQFGISLSDFHLNNKLQLGLVPSSFQQIDFHSRISNRSVTDHRDSSS--------- 499
Query: 479 PHPSKPNNDTLLEQVE-TGRKTETGTSCR-----LFGIELINH---ATSSAPSEKVPVSS 529
+N ++L+ E TG K E S + LFG ++ SS+ + P +
Sbjct: 500 ------HNSSVLQNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSSDIRSPPTE 553
Query: 530 LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES--------QSKQSC-LTS 580
++ + + + G + FK+ QVSP +S Q Q+ L
Sbjct: 554 KSSSDVNLERVKFLSHGSGST-----FKQ------QVSPNKSPGVGFPWYQGYQATELGL 602
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 640
+ KV M+ VGR L+L+ + Y+ L L MF G ++Y D G +
Sbjct: 603 DIGHCKVFMESEDVGRTLNLSVISSYEELYRRLANMF---GMEKPDILSHVLYQDATGAV 659
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
GD P+ +F +R+ I + K+
Sbjct: 660 KQAGDKPFSDFIKTARRLTILTDSGSDKL 688
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 128/163 (78%), Gaps = 9/163 (5%)
Query: 222 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
R RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPR T S+FII ++Y
Sbjct: 38 RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPR--TSPSEFIIPYDQY 95
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASI 341
+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ W +S WRSLKV+WDEP++I
Sbjct: 96 MESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTI 155
Query: 342 TRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPL 383
RPDRVSPW+IEP AS+ P V P+ L++ KRPR + VPP+
Sbjct: 156 PRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPV 192
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 554
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 401 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 457
Query: 555 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 458 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 516
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 517 YDELTAELDRMFEFGGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 576
Query: 665 DVKKMSPGSKLP 676
+V+KM+ S P
Sbjct: 577 EVQKMNSKSSTP 588
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 183/379 (48%), Gaps = 45/379 (11%)
Query: 8 LSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF 66
L P++N D + R++W ACA PL +P G VYYFP GH EQ A L
Sbjct: 7 LHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPA----- 61
Query: 67 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP-------SQNEPTTPDPCPADSPRPK 119
P C V + L A+ ET+EV+A+I+L P P + +PT+ D P +
Sbjct: 62 --PHLFPCTVAGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTS------DCPPQE 113
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
+ F+K LT SD + GGFSV R A P LD + + P Q+L +D G W+F+HI+
Sbjct: 114 LSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIY 173
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP-----SS 234
RG PRRHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R P +
Sbjct: 174 RGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAG 233
Query: 235 VISSQSMHLGVLA--------TASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVN 286
V Q A A+ A F V Y PR +FI+ ++ +
Sbjct: 234 VDPDQPPPRNARARVPPQDVIEAARLAAEGRSFAVTYFPR--QAAGEFIVPRDEVEGVLA 291
Query: 287 NKFAVGMRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITR 343
++ G + +M+ E ED+ RR V + + WR+L++ WD+ P S
Sbjct: 292 TRWEPGAQVRMQVMEAEDT--RR----TVWADGHVKSLHQNIWRALEIDWDDSSPLSPNL 345
Query: 344 PDRVSPWEIEPFVASATPN 362
V+ W++E PN
Sbjct: 346 SRFVNAWQVELVTHPPLPN 364
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 182/368 (49%), Gaps = 44/368 (11%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKIL-CRVVNIH 80
LW+A +G + G VYYF QGH+EQ A+ L++ + L + I C V
Sbjct: 6 LWRAFSGNSAHIHTVGSEVYYFVQGHLEQ--ATYVPTLSRSV----LSNPITKCIVSAAD 59
Query: 81 LMAEQETDEVYAQITLLP-EPSQNEPTTPDP---CP-ADSPRPKVHSFSKVLTASDTSTH 135
A+ +DEV ++ L P P Q+ P C + R ++ F+KVLT+SD +
Sbjct: 60 YTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTSSDANNG 119
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTTGWS F
Sbjct: 120 GGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKF 179
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR-----------------------CLARQQSSMP 232
V +K+L+AGD +F R + ++ VG+R C ++ S
Sbjct: 180 VNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVEEKRSGD 239
Query: 233 SSVISSQSMHLG-----VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNN 287
S ++G +ATA+ A F V Y PRI TS+F+I K ++N
Sbjct: 240 RSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRI--GTSEFVIPAEKVNNSLNY 297
Query: 288 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPD 345
++ G+R KM E EDS + + + GTV WK S WR L+V W+E ++
Sbjct: 298 QWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQSAK 357
Query: 346 RVSPWEIE 353
VSPWE+E
Sbjct: 358 FVSPWEVE 365
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 179/348 (51%), Gaps = 18/348 (5%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
RE+W+ AGP +PK +V+YFP GH+E S N E I +R I C V ++
Sbjct: 11 REIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYR--PIIPCVVSDV 68
Query: 80 HLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
L+A+ +TDEV+A++ L P S +EP P+ + ++ K LT SD + G
Sbjct: 69 DLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDANNGGA 128
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV + A PPLD+ P+Q L KD+H + W F+H +RG P+RHL+TT WS FV
Sbjct: 129 FSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKWSKFVD 188
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 257
+K+++ GD+ V ++ + + R+ ++ I+ +S V+ A A T
Sbjct: 189 TKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS----VMEAAELADKNMT 244
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR--FSGTVVG 315
V+YY + F++ +A+ + GMR K + ++S +R F GTV
Sbjct: 245 FEVIYYP--TASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQGTVSA 302
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
+ D S H WR L+V WDE P +VSPW+IE + S TP L
Sbjct: 303 LSDPSHH----PWRMLQVNWDESEVSQNPSQVSPWQIE--LISHTPAL 344
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 189/370 (51%), Gaps = 32/370 (8%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ACAG V +PK RVYYFPQGH+E AS + LN PL R + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHLEH--ASPSHYLN---PLLRSLPFVPCHVSSLD 66
Query: 81 LMAEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 137
+A+ +DEV+A+ L P +P N+ T V SFSK+LT SD + GG
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGG 126
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 197
FSV R A PPLD P+ + +HI+RG PRRHL TTGWS FV
Sbjct: 127 FSVPRYCADSWFPPLDFXXXXPSSPVATSR---RRVALRHIYRGTPRRHLFTTGWSKFVN 183
Query: 198 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----------SVISSQSMHLGVL 246
K+LVAGDT VF++ +G + VG+R AR +++ + S ++ + +
Sbjct: 184 HKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAV 243
Query: 247 ATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 306
A A+ + A F V Y PR T + F++S E++ + GMR K+ E EDS
Sbjct: 244 AAAAESAARNAPFEVVYYPR--TGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSR 301
Query: 307 RR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
F GTV + ++ WR L+V WDEP + RVSPW++E + P +
Sbjct: 302 MTWFQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKRVSPWQVE---LVSLPFALH 354
Query: 366 PVLAKNKRPR 375
V + NKR R
Sbjct: 355 TVYSPNKRLR 364
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 185/378 (48%), Gaps = 47/378 (12%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G VYYFP GH EQ A L IP P C V N+
Sbjct: 16 RDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA----HLPAPIPA---PHLFPCIVTNL 68
Query: 80 HLMAEQETDEVYAQITLLPEP-----SQNEPTTPDPCP------ADSP---RPK-VHSFS 124
L A+ +T+EV+A+I+L P P + + PDP +DSP +P+ + F+
Sbjct: 69 TLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELSYFT 128
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K LT SD + GGFSV R A P LD + P Q LV +D G W+F+HI+RG PR
Sbjct: 129 KELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRGTPR 188
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--------------QQSS 230
RHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R Q
Sbjct: 189 RHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANANQDQ 248
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
P + + + A+ A F V Y PR +F++ ++ A+ ++
Sbjct: 249 QPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPR--QAAGEFVVPRDEVERALATRWE 306
Query: 291 VGMRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPDRV 347
G +M+ E ED+ RR V + + WR+L++ WD+ P S+ V
Sbjct: 307 PGTEVRMQVMEAEDT--RR----TVWADGHVKALHQNIWRALEIDWDDSSPLSLKLSRFV 360
Query: 348 SPWEIEPFVASATPNLVQ 365
+ W+++ PN V+
Sbjct: 361 NAWQVQLVAYPPLPNTVR 378
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 169/338 (50%), Gaps = 22/338 (6%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G +VYYFP GH EQ + L P C V +
Sbjct: 13 RDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLPH-------PHLFPCTVAAV 65
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 139
L A+ TDE +A I+L+P P + P + P ++K LT SD + GGFS
Sbjct: 66 ALSADPSTDEPFATISLVPGPHR---ALGGGAPHHAVDPAFAHYAKQLTQSDANNGGGFS 122
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 199
V R A P LD + P Q L +DL G W F+HI+RG PRRHLLTTGWS FV +K
Sbjct: 123 VPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSRFVNAK 182
Query: 200 RLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGV--LATASHAVATQ 256
LVAGD VF+R +GEL GVR R S P+ + + + A+ A
Sbjct: 183 LLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAARRAAQG 242
Query: 257 TMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 316
F V Y PR +F++ + +A+ + + G + +M+F PE R S + GV
Sbjct: 243 APFTVTYYPR--QGAGEFVVPRKEVEDALISPWEPGTQVRMQFL---HPEDRRSEWINGV 297
Query: 317 EDFSPHWKDSKWRSLKVQWDEPASITRPDR-VSPWEIE 353
H S WR L++ WDE A + +R V+ W+++
Sbjct: 298 VRAVDH---SIWRMLEIDWDESAPPSLKNRHVNAWQVQ 332
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 169/345 (48%), Gaps = 33/345 (9%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL VP G +VYYFP GH EQ + P C V +
Sbjct: 25 RDVWLACATPLSRVPVVGSQVYYFPHGHSEQCPTPPRAPAHNLFP---------CTVAAV 75
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF---SKVLTASDTSTHG 136
L A+ +TDE +A ++L+P P + PD A + RP+ +F +K LT SD + G
Sbjct: 76 RLFADPKTDEPFATVSLVPGPHRA--PAPDLPHASARRPEPTAFRYYAKQLTQSDANNGG 133
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R A PPLD P Q L D G W F+HI+RG PRRHLLTTGWS FV
Sbjct: 134 GFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKFV 193
Query: 197 TSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHLGVLATASH 251
+K LVAGD VF+R +GEL G+R R QQ + + + A
Sbjct: 194 NAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAVR 253
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR--- 308
A F V Y PR +F++ + EA+ + G++ +M+F D+ ERR
Sbjct: 254 LAAEGAPFTVTYYPR--QGAGEFVVPKQEVEEALVGAWRPGVQVRMKF--LDAEERRSEW 309
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
+G V V+ + WR L++ W E + + V+ W++E
Sbjct: 310 INGVVKAVD-------PNIWRMLEINWAESVAGSLNRYVNAWQVE 347
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 191/362 (52%), Gaps = 66/362 (18%)
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 392
VQWDEP+SI RPD+VS WE+EP VAS P QP +NKRPR P LPS S+P
Sbjct: 1 VQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRPR------PTVLPS--SSP 50
Query: 393 WSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS------NFMSRTQSDGEW 444
+ L + S AE +R + K S +SNS + + S+ W
Sbjct: 51 DATVLGGWKPTVESSTFSYAEPQR-GRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYW 109
Query: 445 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 504
+ RV +NI +H + P VE + + G
Sbjct: 110 CNTNRV--------------ENIMDPSSHGANREP-------------VEKKQNSRNG-- 140
Query: 505 CRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDG------KSDIAKEF 556
CRLFGI+L+ ++ E PVS+ + E ++ I + +SDI
Sbjct: 141 CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPS-I 196
Query: 557 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 616
+ +SP ESQS+Q RS TKV MQG+AVGRA+DLT YD L+ +LEEM
Sbjct: 197 SCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEM 251
Query: 617 FDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
FDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++VK++SP KL
Sbjct: 252 FDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKL 311
Query: 676 PM 677
P+
Sbjct: 312 PL 313
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 180/365 (49%), Gaps = 52/365 (14%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
+P D++ +LW+ACAG + VP G YYFPQGH EQ A+ + L +P
Sbjct: 24 EPEDKGRDVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVD--------LRVVP 75
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 129
+ CRV + LMAE +TD++YA+I L+P L
Sbjct: 76 PFVACRVAAVRLMAEPDTDDIYAKIRLVP----------------------------LRP 107
Query: 130 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL-VAKDLHGYEWRFKHIFRGQPRRHLL 188
+ T G ++L + + + + L AK L +W F+H++RG P RHL+
Sbjct: 108 WEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTFRHVYRGNPPRHLI 167
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHL- 243
T GWS FV +K+L+ GD+ VF+R E+G++H+G+R R + + ++ S
Sbjct: 168 TAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKV 227
Query: 244 ---GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
V+ A A A Q VV+Y PR +F + + E++ + + G+R+KM FE
Sbjct: 228 PAEDVVEAARLAAAGQPFEVVHY-PR--ASAPEFCVRADAVKESMRSPWCPGLRFKMAFE 284
Query: 301 GED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 358
ED S F GT+ GVE P W S WR L+V WDEP + RV PW +E + S
Sbjct: 285 TEDLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVE--LVS 342
Query: 359 ATPNL 363
+ PNL
Sbjct: 343 SMPNL 347
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 642
+ KV ++ +GR LDL+ L + L L MF I R+ +VY G++
Sbjct: 532 GQCKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAELRS--HMVYRTISGEVKH 589
Query: 643 VGDDPWHEFCNMVKRIFI 660
+GD+P+ F +RI I
Sbjct: 590 IGDEPFSVFVKSARRITI 607
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 103/141 (73%), Gaps = 4/141 (2%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCR 75
D +Y ELW CAGPLV VP+ G +VYYFPQGH+EQ+EASTNQ Q + + LP KILC
Sbjct: 37 DGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCE 96
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASD 131
V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASD
Sbjct: 97 VMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASD 156
Query: 132 TSTHGGFSVLRKHATECLPPL 152
TSTHGGFSVLR+HA ECLPPL
Sbjct: 157 TSTHGGFSVLRRHADECLPPL 177
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 122/215 (56%), Gaps = 11/215 (5%)
Query: 23 WKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLM 82
W+ACAG V +P RVYYFPQGH EQ +ST L I C++ + +
Sbjct: 1 WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLALSKPSIPCQISAVDFL 60
Query: 83 AEQETDEVYAQITLLP--EPSQNEPTT-PDPC--------PADSPRPKVHSFSKVLTASD 131
A+ TDEV+ ++ L+P P N P + +PC D K+ +FSK+LT SD
Sbjct: 61 ADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFSKILTPSD 120
Query: 132 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
+ GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPRRHLLTTG 180
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
WS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 181 WSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 114/166 (68%), Gaps = 2/166 (1%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E++ RIP + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTH 135
N+ + A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTH
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
GGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 124/218 (56%), Gaps = 15/218 (6%)
Query: 22 LWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHL 81
+W+ACAG V +P RVYYFPQGH+EQ +ST L I C++ +
Sbjct: 1 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60
Query: 82 MAEQETDEVYAQITLLP-------------EPSQNEPTTPDPCPADSPRPKVHSFSKVLT 128
+A+ TDEV+ ++ LLP EPS++E + D K+ +F+K+LT
Sbjct: 61 LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVND--VDDDENKILAFAKILT 118
Query: 129 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 188
SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLL
Sbjct: 119 PSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHLL 178
Query: 189 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
TTGWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 179 TTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 176/402 (43%), Gaps = 116/402 (28%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRV---- 74
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
A + + +P +E F+K+
Sbjct: 75 -----------AGVRFMADPDTDE-----------------VFAKI-------------- 92
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ PT ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 93 ---------------RLVPT--VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKK 135
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ---------------SMHL-- 243
LVAGD+ VF+R ENG+L VG+R + P + SM L
Sbjct: 136 LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRG 195
Query: 244 ----------------------GVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKY 281
V+ A+ AV+ Q VVYY PR T +F +
Sbjct: 196 DDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PR--ASTPEFCVKAGAV 252
Query: 282 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 339
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V WDEP
Sbjct: 253 RAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPD 312
Query: 340 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 381
+ RVSPW +E + S P + LA PR + VP
Sbjct: 313 LLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 349
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 644
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 548 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 603
Query: 645 DDPWHEFCNMVKRIFICS 662
D+P+ EF +R+ I +
Sbjct: 604 DEPFSEFTKTARRLNILT 621
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 169/375 (45%), Gaps = 71/375 (18%)
Query: 31 VDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFR-LPSK---ILCRVVNIHLMAEQE 86
V +P RVYYFPQGH+E PL LPS + C + +I L+A+
Sbjct: 26 VQIPVLHSRVYYFPQGHVEHC-----------CPLLSTLPSSTSPVPCIITSIQLLADPV 74
Query: 87 TDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------PKVHSFSKVLTASDTSTH 135
TDEV+A + L P Q P + R KV +F+K+LT SD +
Sbjct: 75 TDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNG 128
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 195
GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTTGWS F
Sbjct: 129 GGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKF 188
Query: 196 VTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQS 229
V SK+L+AGD+ VF+R E+ +GVR +A++
Sbjct: 189 VNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDD 248
Query: 230 SMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRIITRTSQFIISLNKYLEAVN 286
P + A+ A+Q + F V + P S+F++ +++
Sbjct: 249 GSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYP--AAGWSEFVVRAEDVESSMS 306
Query: 287 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKV-------QWDEP 338
+ G R KM E EDS F G V + W+ S W+ L+V WDEP
Sbjct: 307 MYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEP 366
Query: 339 ASITRPDRVSPWEIE 353
+ RV+PW++E
Sbjct: 367 EILQNVKRVNPWQVE 381
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 171/346 (49%), Gaps = 29/346 (8%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L A+ T E YA I+LLP P A++ + ++K LT SD + GGF
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNGGGF 139
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV R A P L+++ P Q L DL G W F+HI+RG PRRHLLTTGWS FV +
Sbjct: 140 SVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNA 199
Query: 199 KRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
K+LVAGDT VF+ +L VGVR AR S+ + + + A A
Sbjct: 200 KQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAVRLAA 257
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRFS--- 310
Q F V Y PR +F++ + + + + GM+ + + E ED+ RR +
Sbjct: 258 EQAAFRVTYYPR--HGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLN 313
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 354
GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 314 GTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 353
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 171/350 (48%), Gaps = 33/350 (9%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L A+ T E YA I+LLP P A++ + ++K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P L+++ P Q L DL G W F+HI+RG PRRHLLTTGWS
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSK 199
Query: 195 FVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 250
FV +K+LVAGDT VF+ +L VGVR AR S+ + + + A
Sbjct: 200 FVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAV 257
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRF 309
A Q F V Y PR +F++ + + + + GM+ + + E ED+ RR
Sbjct: 258 RLAAEQAAFRVTYYPR--HGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRL 313
Query: 310 S---GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 354
+ GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 314 AWLNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 357
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 113/195 (57%), Gaps = 8/195 (4%)
Query: 30 LVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDE 89
+V +P+ +V+YFPQGH E N +IP F I CRV +I MA ETDE
Sbjct: 1 MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRYMANHETDE 55
Query: 90 VYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHAT 146
VYA++ L+P D + K SF+K LT SD + GGFS R A
Sbjct: 56 VYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGFSCPRYCAE 115
Query: 147 ECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDT 206
P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+ K+L +GD+
Sbjct: 116 MIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDS 175
Query: 207 FVFLRGENGELHVGV 221
VFLR ENGEL VG+
Sbjct: 176 VVFLRSENGELRVGI 190
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA PL +P G VYYFP GH EQ A L P C V +I
Sbjct: 20 RDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPAHLPAPLPA-------PHFFPCTVTDI 72
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS-KVLTASDTSTHGGF 138
L A+ +TDEV+A+I+L P + PDP ++SP + S+S K L+ SD + G F
Sbjct: 73 SLGADDKTDEVFAKISL--RPGLAAASRPDPGSSNSPPREPLSYSIKELSQSDANGGGSF 130
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
V R P +D P Q LV D G +W F+H++R + RH+LTTGWS FV +
Sbjct: 131 CVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTGWSKFVNA 190
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV------------- 245
K LVAGD VF+R NG+L VG+R + R ++ +
Sbjct: 191 KLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPPRNALARV 250
Query: 246 ----LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF-E 300
+ A+ A F V Y PR +F++ N+ ++ + G M+F E
Sbjct: 251 PPKDVMEAARLAAEGRPFTVTYYPR--KAAGEFVVPRNEVEGVLDTLWEPGSHVLMQFAE 308
Query: 301 GEDSPERRFS-GTVVGVEDFSPHWKDSKWRSLKVQWD 336
ED+ ++ G V + H K WR+L++ WD
Sbjct: 309 AEDTRRTMWADGHVKAI-----HQK--IWRALEIDWD 338
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 163/319 (51%), Gaps = 20/319 (6%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAG V +PK VYYFP GH+E + S N L R I C V ++
Sbjct: 12 KIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNPSTLSL--LDRSRQFIPCTVSTVN 69
Query: 81 LMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 138
L+A+ TDEV+ ++ L P + +EP P+ KV S K LT SD + G F
Sbjct: 70 LLADPVTDEVFVKLLLTPGTNNCVHEPP-PEVREDQHDGVKVVSSGKTLTPSDANNGGAF 128
Query: 139 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 198
SV + A PPLD+ P+Q+L D+HG EW+ +H++RG P RHL+TT WS FV
Sbjct: 129 SVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITTNWSEFVDE 188
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
K+L+ GD+ VF++ + +Q ++ I+ +S+ T + +A + M
Sbjct: 189 KKLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKSV------TEAVELAEKNM 242
Query: 259 -FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVG 315
F V Y P F+++ +A+ NK+ G+R K + ++S +R F GT+
Sbjct: 243 AFDVVYYP-TAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSNFEGTISA 301
Query: 316 VEDFSPHWKDSKWRSLKVQ 334
+ +P + WR L+V+
Sbjct: 302 LS--AP---NRPWRMLEVR 315
>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 62/285 (21%)
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSE--NIPKSVM 58
Query: 369 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 429 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 486
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 541
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 161 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVG 220
+ ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 221 VRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNK 280
+R R + + + + + A+ A F V Y PR T +F + +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPR--ASTPEFCVKASG 191
Query: 281 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 338
AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 192 VRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEP 251
Query: 339 ASITRPDRVSPWEIE 353
+ RVSPW +E
Sbjct: 252 DLLQNVKRVSPWLVE 266
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L +LW ACAG +V +P +V+YFPQGH E A TN + R+P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 78 NIHLMAEQETDE 89
+ MA+ ETDE
Sbjct: 63 AVKFMADPETDE 74
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 28 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 62
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 63 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 119
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 675
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 120 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 174
>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 429 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 486
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 541
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+SGTV+GV+D SPHWKDSKWR L+V WDEPA+I+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 429 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 486
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 541
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWE EPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSE--NIPKSVM 58
Query: 369 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 429 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 486
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 541
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 157/285 (55%), Gaps = 62/285 (21%)
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 368
+SGTV+GV+D SPHWKDSKWR L+V WDEPAS +RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 428
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 429 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 486
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 487 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 541
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 542 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 586
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 124/232 (53%), Gaps = 13/232 (5%)
Query: 7 SLSQPSSNSDDLY-RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
+L Q + D + R++W ACA P VP G VYYFP GH EQ L +P
Sbjct: 6 ALPQGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-------HLLAPLPA 58
Query: 66 -FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA--DSPRPKVHS 122
R P C V ++ L AE TDEV+A+I+L P P+ P P P +S R +
Sbjct: 59 SHRFP--CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSY 116
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F L DTST G F + R P LD+N + P Q+LV +D G W+F HI+ +
Sbjct: 117 FVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVK 176
Query: 183 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 234
R+H LT GWS FV +K LVAGDT VF+R NG+L +G+R A + S P +
Sbjct: 177 IRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRA 228
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 13/335 (3%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
E+W CA V +PK RVYYFPQGH+E S++ + L LC V +
Sbjct: 13 EIWHTCATAAVKIPKLHSRVYYFPQGHLENASPSSSSITHTHSFLQSFRPFTLCIVSAVD 72
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPRPKVHSFSKVLTASDTSTHGGFS 139
L+A+ TDEV+ ++ L P + P A+ + R +V SF K LT SD + F
Sbjct: 73 LLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSFH 132
Query: 140 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTFVTS 198
+ R A P LD+ + +Q L D+HG +F H+ RG P+R++L + W++FV
Sbjct: 133 IPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVKR 192
Query: 199 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 258
K+LVAGD+ +F++ G++ VG+R Q ++ + V+ A +
Sbjct: 193 KKLVAGDSVIFMKDSTGKIFVGIR--RNTQFVAAAAEQKKDELEKAVMEALKLAEENKAF 250
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 318
+VYY F++ N E++ ++ MR KM+ + S + GT+ V
Sbjct: 251 EIVYYPQG--DDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTISIVSR 306
Query: 319 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 353
S + WR L+V WDE P RV+PW +E
Sbjct: 307 TS-----NLWRMLQVNWDEFQVSQIPRRVNPWWVE 336
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 100/133 (75%), Gaps = 10/133 (7%)
Query: 258 MFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 317
MF VYYKPR T S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E
Sbjct: 1 MFTVYYKPR--TSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCE 58
Query: 318 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPR 375
+ P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR
Sbjct: 59 NLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR 114
Query: 376 LSMEVPPLDLPSA 388
VPP L S+
Sbjct: 115 --QNVPPPSLESS 125
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 498 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 547
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 338 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 393
Query: 548 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 605
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 394 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 451
Query: 606 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 664
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 452 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 511
Query: 665 DVKKMSPGSKLP 676
+V+KM+ S P
Sbjct: 512 EVQKMNSKSAAP 523
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 175/692 (25%), Positives = 253/692 (36%), Gaps = 186/692 (26%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P RV YFPQGH E A N + R+P +LCRV +
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNP----RIPPLVLCRVSAVK 71
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
+A+ E+DE PE K SF+K LT SD + +GG
Sbjct: 72 YLADPESDEA-------PE-------------------KPASFAKTLTQSD-ANNGG--- 101
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
GWS FV K
Sbjct: 102 --------------------------------------------------GWSNFVNKKN 111
Query: 201 LVAGDTFVFLRGENGELHVGVR------C-------LARQQSSMP------SSVISSQSM 241
LVAGD+ VFLR ENG+L VG+R C R+ + P + +
Sbjct: 112 LVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNAGFRGKGRV 171
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
+A A+ A FV+ Y PR T +F + + A+ ++ GM++KM FE
Sbjct: 172 RAESVAEAATLAANGQPFVIVYYPR--ASTPEFCVKASSVRAAMQIQWCPGMKFKMAFET 229
Query: 302 EDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
+DS F G + V P W +S WR L+V WDEP + RV+PW +E + S
Sbjct: 230 DDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVE--LVSH 287
Query: 360 TPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 410
P++ + P K+ RL ++P S A P S S N+ A
Sbjct: 288 VPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGA 347
Query: 411 EDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 470
H + SD N K LF + + +A
Sbjct: 348 R------HAQFGLSSSDLHFN-------------------KLQLGLFPLGLQQQLDQTAP 382
Query: 471 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--------LFG--IELINHATSSA 520
P+ + NN+ + + G T+ LFG I + + S
Sbjct: 383 PSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSC 442
Query: 521 PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLT 579
+ +SS SDG + F + Q P+ES S + LT
Sbjct: 443 SGDTAGISS----------------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLT 486
Query: 580 SNR-----------SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
+ KV M+ VGR LDL+ L Y+ L +L MF I+
Sbjct: 487 WYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEML 543
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
++Y D+ G + +GD P+ EF +R+ I
Sbjct: 544 SNVLYRDEAGIVKHIGDAPFGEFLKTARRLTI 575
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITR 270
RG++GEL +GVR + ++ + SQ +LG LA +HAV+T++MF ++Y PR+
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRL--S 69
Query: 271 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRS 330
S+FI+ K+ ++++ F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW+
Sbjct: 70 QSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADPRWRGSKWKC 129
Query: 331 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAAS 390
L V+WD+ RP+R+SPWEIE A++ +L P +K +P L P +P
Sbjct: 130 LLVRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPT-SKRMKPYLPHANPEYTVPYGGG 188
Query: 391 APWSARLAQSHNLTQ 405
P A AQ + Q
Sbjct: 189 RPDFAESAQLRKVLQ 203
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 183/414 (44%), Gaps = 57/414 (13%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ AGP V +PK G +VYYF +GH+E +S N E + L P +LC + ++
Sbjct: 12 KIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIE--TELLLCLRPPSVLCIISSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQN-----EPTTPD------------------PCPADSPR 117
L+A TDEV+A++ L P + EP PD P P + P
Sbjct: 70 LLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPEVPD 129
Query: 118 PK------VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
+ + S+ K+LT SDT G V R+ P LD+ +++L D+
Sbjct: 130 EEDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSVTDIQDV 187
Query: 172 EWRFKHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 230
W +K+ + + + TTGWS FV K+LVA D+ VF++ G++ VG+ C +
Sbjct: 188 VWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGI-CRKAMYPA 246
Query: 231 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFA 290
S+++ + A F V Y P F++ + EA+ N +
Sbjct: 247 TEEEGGKSENLTEKAVKDAVELAGKNMAFQVVYYP--TANWCDFVVDASVVDEAMKNGWE 304
Query: 291 VGMRYKMR---FEGEDSPERRF--SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 345
GM K+R F +S + + GT+ + + + WR L+V WD P P+
Sbjct: 305 FGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVP--SWRMLQVNWDGPDISQNPN 362
Query: 346 RVSPWEIE--PFVASATPNLVQP-----------VLAKNKRPRLSMEVPPLDLP 386
RV+PW+++ P + ++ L P K PRLS PL +P
Sbjct: 363 RVNPWQVDIYPIPSQSSSPLQMPHSYPPIPPPLLPFPPTKSPRLSQSSSPLQMP 416
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 27/366 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ C GP V +PK +VYYFP+GH+E A ++ R L R S I C V ++
Sbjct: 12 KIWQICVGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L + TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCV 127
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ + P LD+++S Q + DL EWR+ + + R H TGW FV K+
Sbjct: 128 PIECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNFVREKK 181
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVA D+ VF++ G++ VG+R + + + + + + VL A A V
Sbjct: 182 LVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVLDAAELAEKNTAFDV 241
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVG 315
VYY R F++ +A+ + GMR K+ + +S + + GT+
Sbjct: 242 VYYPTASGWR--DFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISF 299
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLA 369
V + S + + WR L+V WD P+ V+PW++E P +S+T N P LA
Sbjct: 300 VFNHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEVYNIHAPSTSSSTVN--NPRLA 355
Query: 370 KNKRPR 375
++ P+
Sbjct: 356 ESSSPQ 361
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 98/189 (51%), Gaps = 35/189 (18%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
L ELW ACAGPLV +P G RV YFPQGH EQ
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ--------------------------- 53
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHG 136
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHG
Sbjct: 54 -----ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTHG 108
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 196
GFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG R L W
Sbjct: 109 GFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQSWPVIT 166
Query: 197 TSKRLVAGD 205
S R V D
Sbjct: 167 LSGRRVGRD 175
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 171/366 (46%), Gaps = 27/366 (7%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
++W+ CAGP V +PK +VYYFP+GH+E A ++ R L R S I C V ++
Sbjct: 12 KIWQICAGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 81 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 140
L + TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCV 127
Query: 141 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 200
+ + P LD+++S Q + DL E + + + R H TGW FV K+
Sbjct: 128 PIECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSNSSRLH---TGWLNFVREKK 181
Query: 201 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 260
LVA D+ VF++ G++ VG+R + + + + + VL A A V
Sbjct: 182 LVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLDAAELAEKNTAFDV 241
Query: 261 VYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVG 315
VYY R F++ +A+ + GMR K+ + +S + + GT+
Sbjct: 242 VYYPTASGWR--DFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISF 299
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLA 369
V + S + + WR L+V WD P+ V+PW++E P +S+T N P LA
Sbjct: 300 VYNHSSNVPN--WRMLEVNWDGLDIPQNPNLVNPWQVEVYNIPAPSTSSSTVN--NPRLA 355
Query: 370 KNKRPR 375
++ P+
Sbjct: 356 ESSSPQ 361
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 192
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 8/212 (3%)
Query: 3 NRLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQR 62
L S + P+ + + ++W+ C G V +PK +VYYFPQGH++ + T L
Sbjct: 20 GELHSEAFPTKSIFTIPTKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITL--- 76
Query: 63 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPA-DSPRPK 119
L P I C + + L+ + TDEV+A++ L P + +E P PA D
Sbjct: 77 --LHCYPPSISCIISAVDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPEVPAEDDDGYN 134
Query: 120 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 179
V SF K+LT SD ++ GF V LP L ++ P+Q+L D+ G W++ HI+
Sbjct: 135 VVSFVKILTQSDCNSGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIY 194
Query: 180 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 211
RG+ +RHL + GW++FV +K+LVAGD+FVF++
Sbjct: 195 RGKSKRHLFSRGWTSFVNNKKLVAGDSFVFIK 226
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 108/168 (64%), Gaps = 6/168 (3%)
Query: 209 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRII 268
+R +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR
Sbjct: 5 LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPR-- 62
Query: 269 TRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDS 326
S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S
Sbjct: 63 ASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNS 122
Query: 327 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 374
WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 123 HWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 168
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWH 649
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW
Sbjct: 575 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQ 631
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 152/313 (48%), Gaps = 21/313 (6%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
++ ++W+ C G V +PK RVYYFPQGH+E +S++ + L R +C +
Sbjct: 17 VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSLDLQRFRPFTICIIS 76
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-----DSPRPKVHSFSKVLTASDT 132
+ L+A+ TDEV+A++ L P + + P P D + SF+++L ++
Sbjct: 77 AVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTNV 136
Query: 133 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTG 191
S H F + R A PPL M S Q L+ D+HG W+F H+ G +R++ T+
Sbjct: 137 SKH-AFYIPRFCAENMFPPLGMEVS---QHLLVTDVHGEVWKFHHVCHGFAKRNVFYTSE 192
Query: 192 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
W++FV K+L GD VF++ G+L VG+R R+ ++ + V+
Sbjct: 193 WASFVERKKLDVGDAVVFMKNSTGKLFVGIR---RKDAAEQ----KKDELEKAVMEAVKL 245
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
A + +VYY PR F++ N E++ ++ MR KM+ + S + G
Sbjct: 246 AEENKPFEIVYY-PR-GDDWCDFVVDGNIVDESMKIQWNPRMRVKMK--TDKSSRIPYQG 301
Query: 312 TVVGVEDFSPHWK 324
T+ V S W+
Sbjct: 302 TITTVSRTSNLWR 314
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 164/370 (44%), Gaps = 37/370 (10%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
+LW ACAG +V +P +VYYFPQGH E + E P R+P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 81 LMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTS 133
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
GG V +K L S DL R K G P
Sbjct: 139 NGGGTFVNQKK-------LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPP 191
Query: 194 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 253
+ G +FLRG++ G + A + + + V + V+ A+ AV
Sbjct: 192 PPTPAAGGNYGGFSMFLRGDDD----GNKMAAAARGKVRARVRPEE-----VVEAANLAV 242
Query: 254 ATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGT 312
+ Q VVYY PR T +F + A+ ++ GMR+KM FE EDS F GT
Sbjct: 243 SGQPFEVVYY-PR--ASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGT 299
Query: 313 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 371
V V+ P W +S WR L+V WDEP + RVSPW +E + S P + LA
Sbjct: 300 VSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPF 354
Query: 372 KRPRLSMEVP 381
PR + VP
Sbjct: 355 SPPRKKLCVP 364
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 94/154 (61%), Gaps = 24/154 (15%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 655
+L + KW IV+TDDEGD MLVGDDPW+EFC M
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMA 187
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 490 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 548
+ + T +K E+ TS CRLFGIE I A S PV+++ + G A D
Sbjct: 460 INKAPTEKKQESATSGCRLFGIE-IGSAVS-------PVATVASVGQ---DQPPALSVDV 508
Query: 549 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 608
+SD + + V+ E +S RS TKV MQG+AVGRA+DLT L GY
Sbjct: 509 ESDQLSQPSNANKTDAPVASSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYAD 568
Query: 609 LIDELEEMFDIKGQLHTR-TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
L +LEEMFDI+G+L KW+++YTDDE D MLVGDDPW+EF MVKRI+I S ++ K
Sbjct: 569 LHRKLEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAK 628
Query: 668 KMSPGSKLPM 677
++ +K P+
Sbjct: 629 SLTRKAKPPV 638
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 31/255 (12%)
Query: 439 QSDGEW---LTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ-V 493
+S G W L SP + FS ++ N S ++G + P+ + + L E+ V
Sbjct: 164 ESQGNWFVSLISPSQADFSGTHAPGKLERNPTRSIGTGNTGMAVQQPNLLSREMLEEKGV 223
Query: 494 ETGRKTETGTSCRLFGIELINHATSSAPSE----------KVPVSSLT------TEGHII 537
+G ++ C+LFG LI ++ PS V V ++T +E
Sbjct: 224 LSGTRS---ADCKLFGFHLIENSVVGEPSTLRGLAAGEDIHVSVPNITVHEPQSSESDQH 280
Query: 538 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 597
S S+ A D + I E K Q S KE+ ++ S RS TKV QG A+GRA
Sbjct: 281 SEPSSIAKMDMPAAIIDEEKSS-----QKSSKETHNRPQS-NSTRSCTKVHKQGSALGRA 334
Query: 598 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
+DLT GY LI ELE+MF+I+G+L K W++VYTD+EGDMMLVGDDPW EFC++V+
Sbjct: 335 VDLTKFEGYTELIRELEQMFNIEGELEDPNKGWQVVYTDNEGDMMLVGDDPWQEFCSIVR 394
Query: 657 RIFICSSQDVKKMSP 671
+I+I + ++V+KM+P
Sbjct: 395 KIYIYTREEVEKMTP 409
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 338
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 26/177 (14%)
Query: 479 PHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGH 535
P + +N ++ V + TE +SCRLFG +L + A+++ P +K
Sbjct: 31 PATERNSNKSVFSSVLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDK----------Q 80
Query: 536 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 595
+IS S +DS K + SPKE + + TS RSR KVQMQG AVG
Sbjct: 81 LISVDSNISDSTTKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVG 127
Query: 596 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
RA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 128 RAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (328), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 75/108 (69%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 8 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHI 67
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 226
+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 68 YRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 115
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 666 VKKMSPGS 673
V+KM+PG+
Sbjct: 413 VRKMNPGT 420
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 130 bits (327), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 93/151 (61%), Gaps = 24/151 (15%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 129 bits (324), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 27/230 (11%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
PRP SF+KVLTASD + FSVL A P LD + TP Q + +D+HG EW F
Sbjct: 52 PRPV--SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMF 109
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 235
HI+RG P+RHLLT GW+ FV +K+L GD+ VF+R E+ ++HVG+R R +M +
Sbjct: 110 CHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNG 169
Query: 236 ISSQSMHL----GVLAT-----ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVN 286
+ G ++T A+ F V Y P + +S+F +S+ E++
Sbjct: 170 GGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVA--SSEFCVSVAAVKESM- 226
Query: 287 NKFAVGMRYKMRFEGEDSPERR---FSGTVVGVEDFSPH-WKDSKWRSLK 332
+M FE E+S + F GT+ VE P W +S WR LK
Sbjct: 227 ---------QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASA 359
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 21/200 (10%)
Query: 479 PHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE-G 534
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 245 PDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDPA 295
Query: 535 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGV 592
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 296 HV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQGS 350
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF 651
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW EF
Sbjct: 351 MVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEF 410
Query: 652 CNMVKRIFICSSQDVKKMSP 671
CN+V +I I + +V+KM P
Sbjct: 411 CNIVSKILIYTHDEVEKMIP 430
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 103 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 137
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 138 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 194
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 195 GQLLARDKWIVVFTDDEGDMMLAGDDPW 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 333 VQWDEPASITRPDRVSPWEIEPFVASA 359
VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 VQWDEPTTVQRPDKVSPWEIEPFLATS 27
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASA 359
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 107 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 141
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 142 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 198
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 199 GQLLARDKWIVVFTDDEGDMMLAGDDPW 226
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 329 RSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
RSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 RSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 31
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 105 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 139
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 140 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 196
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 197 GQLLARDKWIVVFTDDEGDMMLAGDDPW 224
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 331 LKVQWDEPASITRPDRVSPWEIEPFVASA 359
L+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 LQVQWDEPTTVQRPDKVSPWEIEPFLATS 29
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 330 SLKVQWDEPASITRPDRVSPWEIEPFVASA 359
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 492 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 548
Q ET + E +CRLFGI L N+ T S S+K ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQKNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 549 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 606
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 607 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 666 VKKMSPGS 673
V+KM+ G+
Sbjct: 413 VRKMNQGT 420
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 501 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 560
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 112 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 146
Query: 561 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 620
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 147 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 203
Query: 621 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 648
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 204 GQLLARDKWIVVFTDDEGDMMLAGDDPW 231
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 326 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 359
SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 3 SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 36
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 24/150 (16%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 651
+L + KW IV+TDDEGD MLVGDDPW+EF
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEF 183
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 40/349 (11%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPS--KILCRVV 77
R++W ACA P +P G VYYFP GH+EQ +Q + LP+ + C V
Sbjct: 20 RDVWLACAAPFSRIPTVGDEVYYFPDGHIEQ---------HQHLSAAPLPAQDRFHCTVT 70
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-------TTPDPCPADSPRPKVHSFSKVLTAS 130
++ L + +TDEV+A+I+L P P + ++ P PA P K+ F+K L+ +
Sbjct: 71 DVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKDLSQT 130
Query: 131 DTSTHGGFSVLRKHATECLPPLDMN----QSTPTQELVAKDLHGYEWRFKHIFRGQP-RR 185
D + +H +P ++ + Q Q++V +D G WRF +R P +
Sbjct: 131 DVYAKFRIPLENEHVLP-IPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYRVNPSKE 189
Query: 186 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 245
H L TGW F +KRL AGD VF+R NG+L VGVR L + Q V
Sbjct: 190 HSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLHVPRYRP----FDFQGPAQDV 245
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
+ A A + F V Y PR +FI+ ++ +A+ + G +M +++
Sbjct: 246 MEAVRLAAAGRP-FTVTYFPR--QAAVEFIVPRSEVDDALATSWEPGAVVRMEVMEDENR 302
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQW--DEPASITRPDRVSPWEI 352
+ V V + + WR L++ W D P + TR V+ W++
Sbjct: 303 QH-----TVWVHGRVNAIRQNIWRMLEIIWGVDPPLATTR--SVNAWQV 344
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 24/147 (16%)
Query: 503 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 562 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 621
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPW 648
+L + KW IV+TDDEGD MLVGDDPW
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPW 180
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 86 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 144
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 69 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 128
Query: 145 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 192
A + P LD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG+
Sbjct: 129 AEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 86 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 144
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 96 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 155
Query: 145 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 191
A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG
Sbjct: 156 AEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
Length = 180
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 60/75 (80%)
Query: 9 SQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRL 68
S+ +DLY ELWKACAGPLV+VP G+RV+YFPQGHMEQLE STNQELN +IP F L
Sbjct: 11 SRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDL 70
Query: 69 PSKILCRVVNIHLMA 83
P KILCRVVNI L+
Sbjct: 71 PPKILCRVVNIRLLV 85
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 311 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 370
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 371 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 404
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 308 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 366
R SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSV--LPPALNVP 58
Query: 367 VLAKNKRPRL 376
L K RP L
Sbjct: 59 RL-KKLRPSL 67
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 26/328 (7%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA P +P G V YFP GH+EQ ++ Q L + + C V ++
Sbjct: 61 RDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ-------HRFHCTVTDV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLTASDTST 134
L + +TDEV+A+I+L P P + P P + + K+ F+K L+ +D
Sbjct: 114 SLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYA 173
Query: 135 HGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTGW 192
+ +H LP P+ Q++V +D G WRF + P ++H LTTGW
Sbjct: 174 RFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGW 230
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F +KRL AGD VF+R NG+L VGVR L + + + A
Sbjct: 231 LDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVMEAVRL 290
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
A F V Y PR +FI+ ++ +A+ + G +M E + R+++
Sbjct: 291 AAAGRPFTVTYFPR--QAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQYTMW 346
Query: 313 VVG-VEDFSPHWKDSKWRSLKVQWDEPA 339
VVG VE + + WR L++ W P+
Sbjct: 347 VVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 26/328 (7%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R++W ACA P +P G V YFP GH+EQ ++ Q L + + C V ++
Sbjct: 61 RDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ-------HRFHCTVTDV 113
Query: 80 HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLTASDTST 134
L + +TDEV+A+I+L P P + P P + + K+ F+K L+ +D
Sbjct: 114 SLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYA 173
Query: 135 HGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTGW 192
+ +H LP P+ Q++V +D G WRF + P ++H LTTGW
Sbjct: 174 RFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGW 230
Query: 193 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 252
F +KRL AGD VF+R NG+L VGVR L + + + A
Sbjct: 231 LDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVMEAVRL 290
Query: 253 VATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 312
A F V Y PR +FI+ ++ +A+ + G +M E + R+++
Sbjct: 291 AAAGRPFTVTYFPR--QAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQYTMW 346
Query: 313 VVG-VEDFSPHWKDSKWRSLKVQWDEPA 339
VVG VE + + WR L++ W P+
Sbjct: 347 VVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 151/342 (44%), Gaps = 44/342 (12%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ L+ RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLS------RLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL------- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVND 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSM 241
GW FV +KRL DT VF+R +GEL VGVR R + P +
Sbjct: 191 NDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK- 249
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE---AVNNKFAVGMRYKMR 298
V++ A+ T F V Y PR T +F++S ++Y+ + F G +R
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPR--EGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLR 304
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 340
+ SGTV + P WR L+V WD+ AS
Sbjct: 305 MNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 399 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 455
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 456 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 508
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 509 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 560
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
++ F V Y P T++F++ + +E + A G R ++ +D+ RR
Sbjct: 561 DASSAQPFRVTYCP--WQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQP 615
Query: 312 TVVG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 362
V G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 616 PVYGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 666
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 151/342 (44%), Gaps = 44/342 (12%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ L+ RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLS------RLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL------- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVND 190
Query: 189 TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSM 241
GW FV +KRL DT VF+R +GEL VGVR R + P +
Sbjct: 191 NDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK- 249
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE---AVNNKFAVGMRYKMR 298
V++ A+ T F V Y PR T +F++S ++Y+ + F G +R
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPR--EGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLR 304
Query: 299 FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 340
+ SGTV + P WR L+V WD+ AS
Sbjct: 305 MNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 423 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 479
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 480 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 532
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 251
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 533 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 584
Query: 252 AVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 311
++ F V Y P T++F++ + +E + A G R ++ +D+ RR
Sbjct: 585 DASSAQPFRVTYCP--WQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQP 639
Query: 312 TVVG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 362
V G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 640 PVYGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 690
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 637
T+ RS TKV QG VGRA+DL+ L GY+ L+ ELE++F ++G L K W I+YTD E
Sbjct: 229 TAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSE 288
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 289 NDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFG 323
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 77/140 (55%), Gaps = 32/140 (22%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 31
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
G+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 32 GKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS- 90
Query: 361 PNLVQPVLAKNKRPRLSMEV 380
N+ Q L K K R E+
Sbjct: 91 -NISQSSLKKKKHWRQLNEI 109
>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 186
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%)
Query: 10 QPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLP 69
Q S D LY ELW ACA PLV P+ G V+YFPQGH+EQ+EAS NQ ++ L+ LP
Sbjct: 10 QAPSVGDPLYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLP 69
Query: 70 SKILCRVVNIHLMAEQETDEVYAQITLLPE 99
K+LCRV+NI L AE + D+VYAQ+ L+ E
Sbjct: 70 PKLLCRVINIELKAEADIDKVYAQVILMLE 99
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ N+ Q L K K R E+
Sbjct: 91 SS--NISQSSLKKKKHWRQLNEI 111
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 70/344 (20%)
Query: 18 LYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRV 76
+ RE+W+ACA P +P G VYYFP GH +Q + + L R+ LC+V
Sbjct: 404 ITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSRPPEPLPGRV--------FLCKV 455
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPK--VHSFSKVLTASD 131
+ L A + +E++A ++L+P +P P DP P+ SP+ K + SF K LT +D
Sbjct: 456 TAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPS-SPQVKTTLVSFVKPLTCTD 512
Query: 132 TSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 189
+ ++ R+ A LP L +N+ P L KD+HG EW + ++ H+L+
Sbjct: 513 AVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLS 567
Query: 190 TGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 248
+GW F + RLV GD VF+R ++GE ++G+R + + + + +
Sbjct: 568 SGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR-----------RTLKPEPVSVDEVIE 616
Query: 249 ASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 308
A A F V Y R +F++ L P
Sbjct: 617 AVWRAARLEPFEVAYLSR--QDGDEFVVPL--------------------------PNVG 648
Query: 309 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 352
G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 649 PQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 686
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH EQ L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ L A+ T+E YA ITL P + P A + ++ F K L +SD
Sbjct: 75 AVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAE 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
F+V A + PPL + Q L+ KDL G F + G R L W
Sbjct: 135 YRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVR 222
F V GD+ +F+ R ++ EL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ ++ Q L K K R E+
Sbjct: 91 SS--DISQSSLKKKKHWRQLNEI 111
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 32/140 (22%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 32
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
G+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 33 GKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS- 91
Query: 361 PNLVQPVLAKNKRPRLSMEV 380
++ Q L K K R E+
Sbjct: 92 -DISQSSLKKKKHWRQLNEI 110
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 32/140 (22%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 31
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
G+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 32 GKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS- 90
Query: 361 PNLVQPVLAKNKRPRLSMEV 380
++ Q L K K R E+
Sbjct: 91 -DISQSSLKKKKHWRQLNEI 109
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ ++ Q L K K R E+
Sbjct: 91 SS--DISQSSLKKKKHWRQLNEI 111
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 32/140 (22%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 32
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
G+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 33 GKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS- 91
Query: 361 PNLVQPVLAKNKRPRLSMEV 380
++ Q L K K R E+
Sbjct: 92 -DISQSSLKKKKHWRQLNEI 110
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 32/140 (22%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 31
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 360
G D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 32 GNDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS- 90
Query: 361 PNLVQPVLAKNKRPRLSMEV 380
++ Q L K K R E+
Sbjct: 91 -DISQSSLKKKKHWRQLNEI 109
>gi|449532340|ref|XP_004173140.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 78
Score = 106 bits (264), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/69 (71%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 616 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK- 674
MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK
Sbjct: 1 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 60
Query: 675 LPMFSIEGE 683
L +EG+
Sbjct: 61 LTSIEVEGD 69
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 32/135 (23%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNK 372
S+ ++ Q L K K
Sbjct: 91 SS--DISQSSLKKKK 103
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+W+SLKVQWDE + RP++VSPW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ ++ Q L K K R E+
Sbjct: 91 SS--DISQSSLKKEKHWRQLNEI 111
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 111
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ + P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETDVFPIQSLGS 98
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 172 EWRFKHIFRGQ 182
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ ++ Q L K K R E+
Sbjct: 91 SS--DISQSSLKKKKHWRQLNEI 111
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 55 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 111
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETNVFPIQSLGS 98
Query: 112 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 171
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 172 EWRFKHIFRGQ 182
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 32/143 (22%)
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKM 297
+ M GV+A+ +A T+ MF V YKPR M
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------------------M 30
Query: 298 RFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 357
+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE +
Sbjct: 31 QFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIP 90
Query: 358 SATPNLVQPVLAKNKRPRLSMEV 380
S+ ++ Q L K K R E+
Sbjct: 91 SS--DISQSSLKKKKHWRQLNEI 111
>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
Length = 139
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 9/121 (7%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRV 76
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++ IP + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 77 VNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASD 131
N+ + A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQ---KDVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 132 T 132
T
Sbjct: 139 T 139
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 150/349 (42%), Gaps = 51/349 (14%)
Query: 20 RELWKACAGPLVDV-PKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKI---LCR 75
R++W ACA P V P G VYY P GH+EQ L+ RLP I C
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLS------RLPDPIHPVPCT 74
Query: 76 VVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 135
V ++ L + E+ E YA I+LLP S ++ T PA P F K L+ +D +++
Sbjct: 75 VADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSN 132
Query: 136 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-----QPRRHLL-- 188
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 133 A--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLGD 190
Query: 189 -----TTGWSTFVTSKRLVAGDTFVFLR--------GENGELHVGVRCLARQQSS-MPSS 234
GW FV +KRL DT VF+R +GEL VGVR R + P
Sbjct: 191 LGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPRP 250
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLE---AVNNKFAV 291
+ V++ + T F V Y PR T +F++S ++Y+ + F
Sbjct: 251 GVEDNK----VVSEVWLEMQGVTPFEVTYYPR--EGTFEFVVSRDEYIGFSFSPFYPFVP 304
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 340
G +R + SGTV + P WR L+V WD+ AS
Sbjct: 305 GTTVHLRMNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 346
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 120/295 (40%), Gaps = 59/295 (20%)
Query: 87 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 137
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 406 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 462
Query: 138 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 192
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 463 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 515
Query: 193 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVL-ATAS 250
S FV +KRL GDT +F+R GE VGVR + H G+L
Sbjct: 516 SAFVKAKRLCVGDTVIFMRRRPGGEPIVGVR----------------RKPHGGMLVGIPD 559
Query: 251 HAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 310
VA + V T++F++ + +E + A G R ++ +D RR
Sbjct: 560 KHVADAWLDAV--------GTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDV-RRRSQ 608
Query: 311 GTVVG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 362
V G V D SKWR L+V WD P + T RV+ W+++P + P
Sbjct: 609 PPVYGTVRDVH---SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 660
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 32/136 (23%)
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
V+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR------------------------------MQFEGKDF 30
Query: 305 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 364
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 31 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 88
Query: 365 QPVLAKNKRPRLSMEV 380
Q L K K R E+
Sbjct: 89 QSSLKKKKHWRQLNEI 104
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 84/166 (50%), Gaps = 40/166 (24%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ + LW C GPL+ +P G +V YFPQG+ EQ+ AST +E + IP+
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIPI------------ 60
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
HL A+QE DEV+AQ+TL P +P PD + + SFS+ LT
Sbjct: 61 -SHLHADQENDEVFAQMTLQPFSQTADPFLLPD--FGIQTKQTIVSFSRTLT-------- 109
Query: 137 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
D Q+ P QELVA+DLH EWRF+HI+RG+
Sbjct: 110 ----------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 182
F K L ASDTSTHGGFSV R+ A + P LD +Q P QEL+A+DLH EW+F+HIFRGQ
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 90
Query: 183 PRRHLLTT 190
P+RHLLTT
Sbjct: 91 PKRHLLTT 98
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 502 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 561
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 562 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 615
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 648
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 313
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 32/135 (23%)
Query: 246 LATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 305
+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR------------------------------MQFEGKDFS 30
Query: 306 ERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 365
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S ++ Q
Sbjct: 31 EKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSL--DISQ 88
Query: 366 PVLAKNKRPRLSMEV 380
L K K R E+
Sbjct: 89 SSLKKKKHWRQLNEI 103
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITR 270
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR
Sbjct: 21 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPR--AS 78
Query: 271 TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKW 328
++F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S W
Sbjct: 79 PTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYW 138
Query: 329 RSLKV 333
RS+KV
Sbjct: 139 RSVKV 143
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 13/143 (9%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITR 270
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPR--AS 282
Query: 271 TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKW 328
++F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S W
Sbjct: 283 PTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYW 342
Query: 329 RSLK-------VQW--DEPASIT 342
RS+K QW +EP +T
Sbjct: 343 RSVKGDQGVNATQWLHNEPILVT 365
>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 169
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 289 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 348
F V + +M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 1 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 60
Query: 349 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 380
PW+IE + S+ ++ Q L K K R E+
Sbjct: 61 PWDIEHLIPSS--DISQSSLKKKKHWRQLNEI 90
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 242 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 299
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 300 ------FLCKVTDVRLGAAA-TNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 352
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 353 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 409
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 410 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 461
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
+ A A + F V Y R +F++ + + + +FA GM +
Sbjct: 462 ----VIEAVWRAARREPFEVSYCSR--QDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAV 515
Query: 302 EDS--PERRFSGTVVGVEDFS 320
ED P G V+ +E+++
Sbjct: 516 EDGKLPTIGPQGEVISIENYA 536
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 140/321 (43%), Gaps = 33/321 (10%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 225 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 282
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 283 ------FLCKVTDVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 335
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 336 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 392
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 241
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 393 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 444
Query: 242 HLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 301
+ A A + F V Y R +F++ + + + +FA GM +
Sbjct: 445 ----VIEAVWRAARREPFEVSYCLR--QDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAV 498
Query: 302 EDS--PERRFSGTVVGVEDFS 320
ED P G V+ +E+++
Sbjct: 499 EDGKLPTIGPQGEVISIENYA 519
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 85/142 (59%), Gaps = 7/142 (4%)
Query: 245 VLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 304
+L+ ++++ +++F + + PR+ S+FI+ K+L+++N F+VG R+K+ E ED+
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRV--GASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDA 58
Query: 305 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S +
Sbjct: 59 NERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS--- 114
Query: 364 VQPVLAKNKRPRLSMEVPPLDL 385
V L+ + R + PP DL
Sbjct: 115 VTHRLSSSVSKRTKLCFPPSDL 136
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 7 SLSQPSSNSDDLYRELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQRIPL 65
S +Q + + + R++W ACA P +P G VYYFP GH EQ + + L RI
Sbjct: 265 SSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI-- 322
Query: 66 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVH 121
LC+V ++ L A T+E A I+L+P + + DP PA + +
Sbjct: 323 ------FLCKVTDVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLV 375
Query: 122 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 181
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 376 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 432
Query: 182 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
R + GW F + LV GD VF+R NGE+ + VR
Sbjct: 433 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR 471
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 263 YKPRIITRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 321
Y PR T S+F++ L KY +A + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 2 YNPR--TSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDP 59
Query: 322 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS--- 377
W +S+WR+L+V WDE + + +RVS WEIE ATP + P + KRP L
Sbjct: 60 VRWPNSQWRNLQVGWDESGAGDKQNRVSIWEIE---TVATPFFICPPFFRLKRPLLPGIL 116
Query: 378 MEVPPLDLPSAASAPW 393
E ++ S S PW
Sbjct: 117 GEDSEIEAASKRSFPW 132
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 639
R+ TKV G VGR++D+T Y L EL MF ++GQL +T W++V+ D E D
Sbjct: 771 RTYTKVYKLG-NVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEND 829
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 690
++LVGDDPW EF + V+ I I S Q+V +MS EG DI+ ++D
Sbjct: 830 ILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQ---------EGMDIVNNAD 871
>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis
guineensis]
Length = 58
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 49/55 (89%)
Query: 42 YFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITL 96
YFPQGHMEQLEASTNQ L+Q +PLF LPSKILCRVV++ L AE +TDEVYAQIT+
Sbjct: 2 YFPQGHMEQLEASTNQGLDQHMPLFNLPSKILCRVVHVQLRAEPDTDEVYAQITI 56
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 150 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 208
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 209 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 239
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 448 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 506
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 48 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 99
Query: 507 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 562
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 100 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 151
Query: 563 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 622
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 152 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 210
Query: 623 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 211 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 260
>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
Length = 223
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 211
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 218
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 216
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 219
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Query: 5 LGSLSQPSSNSDD----LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELN 60
+ + QP + +D L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E++
Sbjct: 7 MSEMPQPLTENDGEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVD 66
Query: 61 QRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITL 96
+IP + LP +++C++ N A+ ETDEVYAQ+TL
Sbjct: 67 AQIPNYPNLPPQLICQLHN----ADVETDEVYAQMTL 99
>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 213
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 199
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 309 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 367
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 LAKNKRPRLSMEVPPLDLPSAASAP 392
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 254 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 312
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 313 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 343
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 68 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 121
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 343 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 397
Query: 122 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 398 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 454
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 236
++ H+L++GW F + RLV GD VF+R ++GE ++G+R + + VI
Sbjct: 455 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSVDEVI 512
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
A A F V Y R +F++ A+ KF GM
Sbjct: 513 E-----------AVWRAARLEPFEVTYLSR--QDGDEFVVPCGIVHNALRAKFTPGMVVN 559
Query: 297 MRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 352
+ E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 560 FVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 611
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 69 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFS 124
P LC V + L A+ T+E YA ITL P + P A + ++ F
Sbjct: 26 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85
Query: 125 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 184
K L +SD F+V A + PPL + Q L+ KDL G F + G
Sbjct: 86 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 141
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVR 222
R L W F V GD+ +F+ R ++ EL+VGVR
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVR 180
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 68 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 121
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 384 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 438
Query: 122 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 177
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 439 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 495
Query: 178 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 236
++ H+L++GW F + RLV GD VF+R ++GE ++G+R + + VI
Sbjct: 496 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSVDEVI 553
Query: 237 SSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYK 296
A A F V Y R +F++ A+ KF GM
Sbjct: 554 E-----------AVWRAARLEPFEVTYLSR--QDGDEFVVPCGIVHNALRAKFTPGMVVN 600
Query: 297 MRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 352
+ E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 601 FVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 652
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH EQ L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTS 133
+ L A+ T+E YA ITL P + P A + ++ F K L +SD
Sbjct: 75 AVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAE 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
F+V A + PPL + Q L+ KDL G F + G R L W
Sbjct: 135 YRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-RGENGELHVGVR 222
F V GD+ +F+ R ++ EL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 578 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 635
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 71 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 129
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 130 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 164
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 638
N + KVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E
Sbjct: 478 NANLYKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 536
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 537 DILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 568
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 105 PTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 160
P TP P D PR + H F K +T SD + ++HA C P LD++ ++P
Sbjct: 109 PVTPPNLPRDEPRESSPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPG 167
Query: 161 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 219
Q L +D+ G WRF++ + + ++LT GWS FV K+L AGD F RG N EL++
Sbjct: 168 QTLSFEDVSGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 23/107 (21%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW-RFKHIF 179
H F K LTASDTSTHGGFSV R+ A +C PPL+ W RFK
Sbjct: 121 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECK 162
Query: 180 RGQPRRHLL----TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
R R +++ TTG S FV K+LV+ D +FLRG+NGEL +GVR
Sbjct: 163 RTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVR 209
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 123 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
F K L ASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFR
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 227 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 285
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 673
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 286 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 320
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
MF+I+G+L +K W++VYTD+EGDMMLVGDDPW EFC++V++IFI + ++V+KM+P
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTP 57
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 230 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVN-NK 288
S+PSSV+S+ +M + L A A +T+ V Y P S+F++ L+KY A+ ++
Sbjct: 36 SLPSSVLSANNMPIDALVVA----ANRTLLPVVYYPGACV--SEFVVPLSKYNNALFVSQ 89
Query: 289 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 347
++G+R+ M FE + GT+VG+ D P W DS+W++++V+WD+P +P+RV
Sbjct: 90 LSIGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRV 149
Query: 348 SPWEI 352
W+I
Sbjct: 150 CSWDI 154
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 108 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 167
P +D R + H F K +T SD + ++HA C P LD+ + P Q L +D
Sbjct: 184 PSTSASDFARNREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFED 242
Query: 168 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ G WRF++ + + ++ T GWS F+ K+L AGDT F RG N EL++ R
Sbjct: 243 VSGKHWRFRYSYWNSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFR 297
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 103 NEPTTPDPCPADSPRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 159
N P D P+ P+P + H F K +T SD + ++HA C P LD+ + P
Sbjct: 49 NPPNESDDPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVP 107
Query: 160 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 219
Q L +D+ G WRF++ + + ++ T WS F+ K+L AGDT F RG N EL++
Sbjct: 108 CQTLSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYI 167
Query: 220 GVR 222
R
Sbjct: 168 DFR 170
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 293 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 351
MR++MRFE ED+ ERR +G + G+ D P W SKWR L V+WD+ + R +RVSPWE
Sbjct: 1 MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWE 59
Query: 352 IEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 387
IEP AS + NL+ L KR R+ M L+ P+
Sbjct: 60 IEPSGSASNSSNLMSAGL---KRTRIGMTSVKLEFPT 93
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 348 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 406
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 678
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 407 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 447
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 636
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 33 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 91
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 92 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 125
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 587 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 645
V QG VGR +DL YD L L +F+++GQL TK W++VYTD E D++LVGD
Sbjct: 1 VYQQG-KVGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 646 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 684
DPW EFC V+ + I S QD + G ++P S E +D
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVG-RIPASSCEEDD 97
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 21 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 79
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-SPGS 673
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 80 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 116
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
R+ TKV G ++GRA+D+T Y L EL MF++ GQL ++ W++V+ D EGD++
Sbjct: 30 RTYTKVYKLG-SIGRAVDVTRFSNYTELRWELARMFNLDGQLDQKSGWQLVFIDHEGDIL 88
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDV 666
LVGDDPW EF + V+ I I S +V
Sbjct: 89 LVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 485 NNDTLLEQVETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISA 542
N+ +E G + G+ +LFG++++N + S S+ S ++ +
Sbjct: 99 NSKGNVESDVMGSQPTGGSKLKLFGVDILNGPESPSQHGSKLTHFGSFPAASKTVNFLEQ 158
Query: 543 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 602
+ + G SD +Q +SC TKV G A+GR++D++
Sbjct: 159 SKSTSGNSD-------------------TQCSRSC-------TKVLKYGCALGRSIDMSR 192
Query: 603 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
+ GY LI EL+++F +G L +K W + Y D EG+ L+GD PW + MV+++FIC
Sbjct: 193 VKGYGELISELDKLFGFEGSLLDGSKDWHVTYQDREGNTKLLGDYPWSDSQAMVRKMFIC 252
>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 183
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Query: 323 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 382
W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 1 WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------P 54
Query: 383 LDLPSAASAP 392
LPS A+ P
Sbjct: 55 PGLPSPATGP 64
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 10/109 (9%)
Query: 185 RHLLTTGWSTFVTSKRLVAGDTFVFL-------RGENGELHVGVRCLARQQSSMPSSVIS 237
RHLLTTGWS FV++K LVAGD+ +F R E +L G+R Q+ MPSSV+S
Sbjct: 58 RHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKNQLLFGIRHAIWPQTVMPSSVLS 117
Query: 238 SQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFII-SLNKYLEAV 285
+ S+HLG+LA +HA AT + F ++Y PR S+F+I SL+ LE V
Sbjct: 118 TDSLHLGLLAAVAHAAATNSPFTIFYNPRAC--PSEFVIPSLSIMLEYV 164
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 616 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSA 60
Query: 675 LP 676
P
Sbjct: 61 AP 62
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R++W ACA P +P G V+YF GH Q L Q +P P LC V
Sbjct: 18 RDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTS 133
+ L A+ T+E YA+ITL P + P ++ F K L SD
Sbjct: 75 AVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFD 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
FS A PPL + Q L+ KDLHG F + +G +R L W
Sbjct: 135 FRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-----RGENGELHVGVR 222
F V GD+ +F+ ++GEL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 203 AGDTF-VFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 261
GD F VFL GE S S +S++S V+ +A+ A A Q VV
Sbjct: 15 GGDNFSVFLGGEMKSSGNTNNNTNSNGFSRNRSKVSAKS----VVESATLAAAGQPFEVV 70
Query: 262 YYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 320
YY PR T +F + A+ +++ GMR+KM FE EDS F GT+ V+
Sbjct: 71 YY-PR--ASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTISSVQLAD 127
Query: 321 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 377
P W +S WR L+V WDEP + RVSPW +E V+S P + P K+ R++
Sbjct: 128 PVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-VVSSMPPIQLTPFTLPKKKLRVT 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 645
KV M+ VGR LDL+ Y+ L L +MF I+ +L + ++Y D +G + GD
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-ELELSNR--VLYKDTDGTVRHTGD 502
Query: 646 DPWHEFCNMVKRIFICSSQDVKKM 669
+P+ +F V+R+ I S M
Sbjct: 503 EPYRDFMKTVRRLTILSDSSSDNM 526
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 104 EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQ 156
+P P DP P+ P+V SF K LT +D + ++ R+ A LP L +N+
Sbjct: 13 QPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNE 69
Query: 157 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENG 215
P L KD+HG EW + ++ H+L++GW F + RLV GD VF+R ++G
Sbjct: 70 HVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSG 124
Query: 216 ELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFI 275
E ++G+R + + VI A A F V Y R +F+
Sbjct: 125 ERYMGLRRTLKPEPVSVDEVIE-----------AVWRAARLEPFEVTYLSR--QDGDEFV 171
Query: 276 ISLNKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKV 333
+ A+ KF GM + E+ P G V+ +E+++ S WR ++V
Sbjct: 172 VPCGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQV 227
Query: 334 QWDEPASITRPDRVSPWEIEPFVASAT 360
+W A + R V+ W+I + ++
Sbjct: 228 EWPSCAGMNR--YVNFWQIREVLGESS 252
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ ++P Q L +D+ G WRF++ +
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG + EL++ R
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFR 263
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 20 RELWKACAGPLVD-VPKQGQRVYYFPQGHMEQLEASTNQELNQ-RIPLFRLPSKILCRVV 77
R +W ACA P +P G V+YF GH Q L Q +P P LC V
Sbjct: 18 RAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG---PRVFLCTVA 74
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTS 133
+ L A+ T+E YA+ITL P + P ++ F K L SD
Sbjct: 75 AVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFD 134
Query: 134 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 193
FS A PPL + Q L+ KDLHG F + +G +R L W
Sbjct: 135 FRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWK 190
Query: 194 TFVTSKRLVAGDTFVFL-----RGENGELHVGVR 222
F V GD+ +F+ ++GEL+VGVR
Sbjct: 191 KFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDV 666
LVGDD W EF + V+ I I S +V
Sbjct: 241 LVGDDRWEEFVSSVRGIRIISPSEV 265
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDV 666
LVGDD W EF V+ I I S +V
Sbjct: 241 LVGDDRWEEFVTSVRGIRIISPSEV 265
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 596 RALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCN 653
R D+ GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF N
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 654 MVKRIFICSSQDVKKMS 670
V+ I I SS +V++MS
Sbjct: 422 CVQSIKILSSAEVQQMS 438
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDE 637
S R+ KV G + GR+LD++ YD L EL +F ++GQL R + W++V+ D E
Sbjct: 46 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRE 104
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GDDPW EF N V I I S +V++M
Sbjct: 105 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 136
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 595 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 389 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 448
Query: 653 NMVKRIFICSSQDVKKM 669
+ V I I S Q+V++M
Sbjct: 449 STVSCIKILSPQEVQQM 465
>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
Length = 317
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 18 LYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVV 77
+ + LW C GPL+ +P G +V YFPQGH EQ+ AST +E + IP+
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIPIS----------- 61
Query: 78 NIHLMAEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHG 136
HL A+QE DEV+AQ+TL P +P PD + + SFS+ LT+S S+
Sbjct: 62 --HLHADQENDEVFAQMTLQPFSQTADPFLLPD--FGIQTKQTIVSFSRTLTSSGESSPR 117
Query: 137 GFSVLRKH 144
+L +H
Sbjct: 118 PLLILPRH 125
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 27 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 85
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 86 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 115
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 650
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 434 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 493
Query: 651 FCNMVKRIFICSSQDVKKM 669
F N V I I S +DV K+
Sbjct: 494 FVNNVWYIKILSPEDVLKL 512
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 293 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 351
MR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WE
Sbjct: 1 MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60
Query: 352 IEPFV 356
IEP
Sbjct: 61 IEPLT 65
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
++GRA+D+ Y L EL MF + GQL R W++V+ D E D++LVGDDPW EF
Sbjct: 7 SIGRAVDVARFKNYVELRAELSRMFGLDGQLDQRNGWQLVFVDKENDLLLVGDDPWEEFV 66
Query: 653 NMVKRIFICSSQDV 666
+ V+ I I S +V
Sbjct: 67 SSVRGIRILSPSEV 80
>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
Length = 496
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 138/346 (39%), Gaps = 58/346 (16%)
Query: 20 RELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNI 79
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 80 HLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 134
L A+ T E YA I+LLP P A++ + ++K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 135 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 194
GGFSV R A P L+++ P E G R I PR
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPRPE---PHHGGPAGRLVGIPPHLPRH--------- 187
Query: 195 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 254
+ A D +R G + Q M + ++++
Sbjct: 188 ---AAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVMEAVRLAAE--------------- 229
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGEDSPERRFS--- 310
Q F V Y PR +F++ + + + + GM+ + + E ED+ RR +
Sbjct: 230 -QAAFRVTYYPR--HGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLN 284
Query: 311 GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 354
GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 285 GTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 324
>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
Length = 89
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 4 RLGSLSQPSSNSDDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRI 63
RL S + + + + ELW ACAGPL+ +P++G V YFPQGH+EQ S Q Q++
Sbjct: 15 RLNSSEELALSKSSICMELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQ---QQM 71
Query: 64 PLFRLPSKILCRVVNIHL 81
+ LP +I CRV+N++L
Sbjct: 72 RPYELPPQIFCRVLNVNL 89
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
RS KV G ++ RA+D+ Y L EL MF++ GQL W++V+TD+E D++
Sbjct: 717 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPTVGWQLVFTDNEDDLL 775
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDV 666
LVGDDPW EF V+ I I + +V
Sbjct: 776 LVGDDPWDEFVRNVRGIRILTPAEV 800
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 42 YFPQGHMEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-- 98
+F + + +L +E++ +IP + LP +++C++ N+ + A+ TDEVYAQ+TL P
Sbjct: 31 FFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPLS 90
Query: 99 EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQST 158
Q EP P S +P + F K LT S+ STHGGFS+ R+ A + PPLD +
Sbjct: 91 PEEQKEPFLPIELGGASKQP-TNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQP 149
Query: 159 PT 160
P
Sbjct: 150 PC 151
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDRENDVLL 65
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|224070983|ref|XP_002303315.1| predicted protein [Populus trichocarpa]
gi|222840747|gb|EEE78294.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------- 618
ESQ+K + K+ M+GV +GR +DL Y+ L ++E+F
Sbjct: 204 ESQNKPAGTCKKGLFVKINMEGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSC 263
Query: 619 ------------IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
I G L ++++VY D+EGD MLVGD PWH F + VKR+ + S +V
Sbjct: 264 NGIMNKQEGEKAIMGVLDGSGEYKLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEV 323
Query: 667 KKMSPGS 673
++ GS
Sbjct: 324 SALNLGS 330
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 642
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 65
Query: 643 VGDDPWHEFCNMVKRIFICSSQDVKKM 669
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 72.0 bits (175), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 581 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEG 638
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 26 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 84
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 85 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 115
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 641
RS KV G ++ RA+D+ Y L EL MF++ GQL + W++V+TD+E D++
Sbjct: 31 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPKVGWQLVFTDNEDDLL 89
Query: 642 LVGDDPWHEFCNMVKRIFICSSQDV 666
LVGDDPW EF V+ I I + +V
Sbjct: 90 LVGDDPWEEFVRNVRGIRILTPAEV 114
>gi|357513517|ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355521069|gb|AET01523.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 271
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------------DIKGQ 622
K+ M GV +GR +D+ Y+ L ++++F +KG
Sbjct: 158 VKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGS 217
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+ + GSK
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDLPAFNIGSK 269
>gi|356556539|ref|XP_003546582.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 621
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 197 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 256
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 257 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 309
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 211 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM-FVVYYKPRIIT 269
R N EL +GVR AR + S S + +A Q M F V Y PR+
Sbjct: 3 RNSNSELFIGVRRDARWNRNGERS---SSGRVRAEEVAVAAELAAQGMPFEVVYYPRV-- 57
Query: 270 RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDS 326
+S F++ EA++ + GMR KM E EDS + F GTV V D P W+ S
Sbjct: 58 GSSDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGS 116
Query: 327 KWRSLKVQWDEPASITRPDRVSPWEIE 353
WR L+V WDEP + RVSPW++E
Sbjct: 117 LWRMLQVTWDEPEVLQNVMRVSPWQVE 143
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 593 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 650
GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW
Sbjct: 2 VCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEA 61
Query: 651 FCNMVKRIFICSSQDVKKMS 670
F N V I I S +DV+K+
Sbjct: 62 FVNNVWYIKILSPEDVQKLG 81
>gi|297743183|emb|CBI36050.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKG 621
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 240 VKINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITG 299
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 300 LLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 637
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 50 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 108
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
D++L+GDDPW EF N V I I S +V
Sbjct: 109 NDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|359482888|ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 622
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 241 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITGL 300
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 301 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|226531844|ref|NP_001150765.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195641652|gb|ACG40294.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 628
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 594 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 651
+GRALDL GY L++EL+ +F I L+ ++W+ VY D+EGDM+LVGDDPW F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG-SEWQAVYVDNEGDMLLVGDDPWGVF 214
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 257
>gi|356550493|ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 346
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 621
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 223 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 282
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 283 LLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 335
>gi|413944729|gb|AFW77378.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 628
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 222
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 256
>gi|255549816|ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
gi|223544864|gb|EEF46379.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
Length = 320
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-----------------EEMFDIKGQLHT 625
K+ M GV +GR +DL Y+ L +DEL EE I G L
Sbjct: 214 KINMDGVPIGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDG 273
Query: 626 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++ +VY D+EGD MLVGD PWH F + VKR+ + S +V +S
Sbjct: 274 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>gi|147798046|emb|CAN73899.1| hypothetical protein VITISV_004904 [Vitis vinifera]
Length = 559
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 29/129 (22%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 622
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 393 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKQEEEKTITGL 452
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-----PGSKLP- 676
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + P S +P
Sbjct: 453 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCREFFDPHSLIPH 512
Query: 677 MFSIEGEDI 685
+F + G I
Sbjct: 513 IFGLNGGPI 521
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 636
+S R+ TKV G +VGR+LD+ Y L EL +MF + + + W+IV+ D+
Sbjct: 27 SSQRTFTKVHKLG-SVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDN 85
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI----LLSSDSA 692
E D +L+GDDPW +F N V+ I I S +V ++S + ++ + + L+SSDS
Sbjct: 86 ENDTLLLGDDPWEDFLNCVRSIKILSPSEVTQISQDQLKMLETVPVQHLQPQRLISSDSG 145
Query: 693 E 693
E
Sbjct: 146 E 146
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 579 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 635
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 42 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 101
Query: 636 DEGDMMLVGDDPWHEFCNMVKRIFICS 662
E D++L+GDDPW F N V I I S
Sbjct: 102 KENDILLLGDDPWESFVNNVWYIKILS 128
>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 63
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 30/93 (32%)
Query: 236 ISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRY 295
IS+ M GV+A+ +A T+ MF V YKPR
Sbjct: 1 ISANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------- 31
Query: 296 KMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKW 328
M+FEG+D E+R+ GT++GV D SPHWKDS+W
Sbjct: 32 -MQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEW 63
>gi|297808601|ref|XP_002872184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318021|gb|EFH48443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
KE K+ K+ M+GV +GR ++L+ Y L ++++F K +
Sbjct: 39 KEEMKKRESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 98
Query: 629 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ +VY D EGD +LVGD PW F + VKR+ + + + +SP
Sbjct: 99 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSNASSLSP 141
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 152 LDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVF 209
LD P + ++AKD+HG W+F+HI+RG PRRHLL TGWS FV K G F
Sbjct: 13 LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70
>gi|15219761|ref|NP_171949.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
gi|11131318|sp|Q38830.1|IAA12_ARATH RecName: Full=Auxin-responsive protein IAA12; AltName:
Full=Indoleacetic acid-induced protein 12; AltName:
Full=Protein BODENLOS
gi|12083206|gb|AAG48762.1|AF332398_1 auxin-induced protein, IAA12 [Arabidopsis thaliana]
gi|972927|gb|AAC49053.1| IAA12 [Arabidopsis thaliana]
gi|2494122|gb|AAB80631.1| Match to Arabidopsis IAA12 (gb|U18414) [Arabidopsis thaliana]
gi|17529012|gb|AAL38716.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|20465451|gb|AAM20185.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|332189592|gb|AEE27713.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
Length = 239
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 543 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 602
A + DG+ + K E K ++V+PK KV M GV +GR +D+
Sbjct: 95 AEEGDGEKKVVKN-DELKDVSMKVNPK---------VQGLGFVKVNMDGVGIGRKVDMRA 144
Query: 603 LVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIVYTDDEGDMMLVGDDPWHE 650
Y++L LEEMF + G L + + + Y D EGD MLVGD PW
Sbjct: 145 HSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 204
Query: 651 FCNMVKRIFICSSQDVKKMSP 671
F N VKR+ I + + ++P
Sbjct: 205 FINSVKRLRIMGTSEASGLAP 225
>gi|297843264|ref|XP_002889513.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
gi|297335355|gb|EFH65772.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 632
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTSREKVKPLRLLDGSSDFVLT 186
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
Y D EGD MLVGD PW F N VKR+ I S + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGSSEASGLAP 225
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 69/180 (38%)
Query: 182 QPRRHLLTTGWS--TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 239
QPR HL+T GWS T V+ K L + D +FL
Sbjct: 66 QPRWHLITIGWSILTIVSQKNLTSCDVVLFL----------------------------- 96
Query: 240 SMHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 299
A+HA +F+I KY+ ++ N +G R+ MRF
Sbjct: 97 ---------ATHA--------------------EFVIPYEKYITSIRNPICIGTRFIMRF 127
Query: 300 EGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT-RPDRVSPWEIEPFVA 357
E DSPE R +G V GV D P+ W +SKW D + ++ +RVS WEI+P V+
Sbjct: 128 EMNDSPE-RCAGVVAGVYDLDPYRWPNSKWC------DGMSLVSDHQERVSLWEIDPSVS 180
>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 174
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 82 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 141
Query: 645 DDPWHEFCNMVKRIFICSSQDVKKMSP 671
D PW F + VKR+ + + +SP
Sbjct: 142 DVPWEMFVSTVKRLHVLKTSHAFSLSP 168
>gi|357454777|ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355486717|gb|AES67920.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 269
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 621
K+ M GV +GR +DL YD+L ++++F I G
Sbjct: 151 KINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITG 210
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + G++
Sbjct: 211 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTLGTR 263
>gi|304322554|gb|ADL70764.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 158
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 645 DDPWHEFCNMVKRIFICSSQDVKKMSP 671
D PW F + VKR+ + + +SP
Sbjct: 126 DVPWEMFVSTVKRLHVLKTSHAFSLSP 152
>gi|297605239|ref|NP_001056915.2| Os06g0166500 [Oryza sativa Japonica Group]
gi|75252070|sp|Q5VRR0.1|IAA20_ORYSJ RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|55296040|dbj|BAD67602.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|55296147|dbj|BAD67865.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|125596172|gb|EAZ35952.1| hypothetical protein OsJ_20255 [Oryza sativa Japonica Group]
gi|215734885|dbj|BAG95607.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676750|dbj|BAF18829.2| Os06g0166500 [Oryza sativa Japonica Group]
Length = 183
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 555 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
E K+++ V P + ++ KV+M+G+A+GR LDL+ L Y L+D L
Sbjct: 71 EMGNKRRKLVGWPPVKCLHRRRDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLH 130
Query: 615 EMFDIKGQ--LHTRTK---WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
MF Q H R + + + Y D EGD M VGD PW F VKR+ I
Sbjct: 131 LMFPSTNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKI 181
>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
Full=Indoleacetic acid-induced protein 28
gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
Length = 175
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 645 DDPWHEFCNMVKRIFICSSQDVKKMSP 671
D PW F + VKR+ + + +SP
Sbjct: 143 DVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>gi|125554220|gb|EAY99825.1| hypothetical protein OsI_21816 [Oryza sativa Indica Group]
Length = 183
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 640
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 641 MLVGDDPWHEFCNMVKRIFI 660
MLVGD PW F VKR+ I
Sbjct: 162 MLVGDVPWEAFAKSVKRLKI 181
>gi|224099985|ref|XP_002311698.1| predicted protein [Populus trichocarpa]
gi|222851518|gb|EEE89065.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 526 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 582
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 628
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLD 197
Query: 629 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ + Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 198 GLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAP 244
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 114 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 162
DS RP K H F KV+T SD + ++HA P LD + +
Sbjct: 13 DSERPRGGVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGG 72
Query: 163 -----LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 216
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG GE
Sbjct: 73 GKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|16610207|dbj|BAB71765.1| IAA/AUX protein [Physcomitrella patens]
Length = 484
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 626
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 348 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 407
Query: 627 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 408 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 467
Query: 668 KMSPGSKLP 676
++P + P
Sbjct: 468 NLAPKNADP 476
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 255 TQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF----- 309
T+ + VVY +S+F I NK+L++++ F+ GMR+KM FE ED+ ERRF
Sbjct: 14 TEHVGVVYNFLPCRASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGY 73
Query: 310 SGTVVGVEDFSP-HWKDSKWRSLKVQW 335
+G + GV + P W SKW+ L V W
Sbjct: 74 TGIITGVSELDPARWPGSKWKCLLVSW 100
>gi|168044918|ref|XP_001774926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|16610209|dbj|BAB71766.1| IAA/AUX protein [Physcomitrella patens]
gi|162673673|gb|EDQ60192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 572 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 626
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 367 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 426
Query: 627 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 427 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 486
Query: 668 KMSPGSKLP 676
++P + P
Sbjct: 487 NLAPKNADP 495
>gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
Length = 239
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 632
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>gi|351722464|ref|NP_001236733.1| uncharacterized protein LOC100305535 [Glycine max]
gi|255625835|gb|ACU13262.1| unknown [Glycine max]
Length = 189
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 509 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 568
G+E+ P ++P + + + S I A D + S + K + V P
Sbjct: 7 GLEITTELRLGLPGGELPGKNEKIKKRVFSEIQAHDDDENSSSEQDRKIQTKNQVVGWPP 66
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
S K++ + + KV M G R +DL GY L+ LE+ F G
Sbjct: 67 VCSYRKKNTVNETKMYVKVSMDGAPFLRKIDLAMHKGYSELVLALEKFFGCYGIREALKD 126
Query: 629 WE-----IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK--KMSPGSKLPMFSIE 681
E +Y D +GD MLVGD PW F KR+ I D K + P L F IE
Sbjct: 127 AENAEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKGSDAKGFDLQPKGSLKGF-IE 185
Query: 682 G 682
G
Sbjct: 186 G 186
>gi|118484337|gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 538 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVA 593
S +S A + + D K EK + + + K ++ T N KV M GV
Sbjct: 137 SLVSQAKAARAEED--KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVP 194
Query: 594 VGRALDLTTLVGYDHLIDELEEMF--------DIKGQ---------LHTRTKWEIVYTDD 636
+GR +DL Y+ L LEEMF I GQ L +++ + Y D
Sbjct: 195 IGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDK 254
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 255 EGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 289
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 259 FVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VG 315
F V Y PR S F++ A+ + GMR KM E EDS F GTV G
Sbjct: 25 FDVVYYPRA-GWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTG 83
Query: 316 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 363
+ D S W+ S WR L++ WDEP + RVSPW++E FVA+ TP L
Sbjct: 84 LPD-SGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVE-FVAT-TPQL 128
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + Q L +D G WRF++
Sbjct: 90 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYS 148
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 149 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 182
>gi|110736486|dbj|BAF00211.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 58
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 683
+MLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 1 IMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 44
>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
Length = 249
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 553 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 612
A+E +E +++V+ + +K++ KV M GVA+GR +DL Y++L
Sbjct: 102 AREEEEAGKKKVKDDETKDVTKKANGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQT 161
Query: 613 LEEMF--------DIKGQ-------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 657
LE+MF + GQ L +++ + Y D EGD MLVGD PW F VKR
Sbjct: 162 LEDMFFRNNPGTIGLTGQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFITSVKR 221
Query: 658 IFICSSQDVKKMS 670
+ + + + ++
Sbjct: 222 LRVMKTSEANGLA 234
>gi|365818545|gb|AEX00361.1| IAA19 [Solanum lycopersicum]
Length = 192
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG---QLHT 625
K S + + ++N+ KV M G R +DL+T GYD L+ LE++FD G L
Sbjct: 72 KNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLFDCYGIGEALED 131
Query: 626 RTKWEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
K E V Y D +GD MLVGD PW F KR+ I + K + G++
Sbjct: 132 ADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLGAR 182
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 84 EQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFSVLR 142
++E + +Y Q L + P+ S + H F KVLT SD V +
Sbjct: 21 QEEDNNLYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDKVLTPSDVGKLNRLVVPK 80
Query: 143 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 202
+HA P + +L +D G W+F++ + G + +++T GWS FV + RL
Sbjct: 81 QHAERFFPA----AGAGSTQLCFQDRGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLA 136
Query: 203 AGDTFVFLRGENGELHVGVRCLARQQSSMPSS--------------VISSQSMHLGVLAT 248
AGDT F R G + R R++ + S VI + +M+ G
Sbjct: 137 AGDTVTFSRSGGGRYFIEYRHCQRRRRDVDISFGDAATVPAWPRPIVIGTAAMNNGGATV 196
Query: 249 ASHAVATQTMFVV 261
AS +A + V
Sbjct: 197 ASATIAGHDIEVA 209
>gi|302398571|gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
Length = 325
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 621
K+ M GV +GR +DL Y L +DEL EE +I G
Sbjct: 207 VKINMDGVPIGRKVDLGAYDSYQKLSSAVDELFRGLLAAQRESCNGGTKNKQEEEKEITG 266
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 669
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ +
Sbjct: 267 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAL 314
>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---------IKGQLHTRTKWEIVYTDD 636
KV M+G+++GR LDL GYD L+ L MF + G H+ + Y D
Sbjct: 109 KVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSGKYHILTYEDK 168
Query: 637 EGDMMLVGDDPWHEFCNMVKRIFI 660
EGD M+VGD PW F VKR+ I
Sbjct: 169 EGDWMMVGDVPWEMFLTTVKRLKI 192
>gi|224107521|ref|XP_002314509.1| predicted protein [Populus trichocarpa]
gi|222863549|gb|EEF00680.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 554 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVAVGRALDLTTLVGYDHL 609
K EK + + + K ++ T N KV M GV +GR +DL Y+ L
Sbjct: 124 KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVPIGRKVDLNAHACYETL 183
Query: 610 IDELEEMF--------DIKGQ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 652
LEEMF I GQ L +++ + Y D EGD MLVGD PW F
Sbjct: 184 AQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFL 243
Query: 653 NMVKRIFICSSQDVKKMSP 671
VKR+ I + + ++P
Sbjct: 244 TSVKRLRIMRTSEANGLAP 262
>gi|302398577|gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
Length = 306
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 526 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 585
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 630
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFV 251
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|225437764|ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
gi|297744081|emb|CBI37051.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------DIKGQLHTRTKWEIVYTDDEG 638
KV M+G+ +GR LDL GY LI L+ MF ++ G LH+ + Y D EG
Sbjct: 88 KVYMEGIPIGRKLDLFAHDGYHALIRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKEG 147
Query: 639 DMMLVGDDPWHEFCNMVKRIFI 660
D M+VGD PW F VKR+ I
Sbjct: 148 DWMMVGDVPWELFLTTVKRLKI 169
>gi|399894421|gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
Length = 306
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 526 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 585
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 630
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFV 251
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 90
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV K+L AGDT F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 85
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV K+L AGDT F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|357134358|ref|XP_003568784.1| PREDICTED: auxin-responsive protein IAA16-like [Brachypodium
distachyon]
Length = 239
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 617
K+ M GV +GR +DL GY L D ++ +F
Sbjct: 112 VKINMDGVPIGRKVDLKAHGGYGKLADAVDHLFRGLLAAQRDVNPAIAVGQSSCAGEKNT 171
Query: 618 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
I G L ++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 172 AAITGLLDGSGEYTLVYEDDEGDQMLVGDVPWDMFVATAKRLRVLRSSDLNASS 225
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRCLARQQSSMPSS 234
+ + +++T GWS FV KRL AGDT F RG L + R + S P
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHR 201
Query: 235 VISSQSMHLGVLATASHAVATQTMFVVYYKP 265
++ +H+ LA+ ++ P
Sbjct: 202 MLPRLPLHMPPLASPYGYGPWGGGAGGFFVP 232
>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
Full=Indoleacetic acid-induced protein 13
gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 247
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 630
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 246
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 630
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
Length = 158
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 157
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|218187663|gb|EEC70090.1| hypothetical protein OsI_00719 [Oryza sativa Indica Group]
Length = 237
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 21/101 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 627
K+ M GV +GR +DLT GY L ++++F +G L ++
Sbjct: 120 VKINMDGVPIGRKVDLTAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 177
Query: 628 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 178 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 218
>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 151
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 68 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 127
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 128 VGDIPWDMFLETVRRLKI 145
>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD V ++HA P + +L +D G W+F++ +
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPA-----AGAGTQLCFQDCGGALWQFRYSYW 109
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENG 215
G + +++T GWS FV + RL AGDT F RG G
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGG 144
>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 138
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 55 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 114
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 115 VGDIPWDMFLETVRRLKI 132
>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 642
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 643 VGDDPWHEFCNMVKRIFI 660
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|326530302|dbj|BAJ97577.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 560 KQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 617
K+ V P S ++C KV+ +G A+GR +DL+ Y L+ L MF
Sbjct: 71 KKALVGWPPVSSARSRACGAGGGGGRHVKVRKEGAAIGRKVDLSLHGSYADLLATLARMF 130
Query: 618 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
D G LH ++ + Y D +GD MLVGD PW +F VKR+ I
Sbjct: 131 PDPAGCLHAESEMVVTYEDADGDWMLVGDVPWDDFARSVKRLKI 174
>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 164
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 79 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 138
Query: 645 DDPWHEFCNMVKRIFICSS 663
D PW F + VKR+ + +
Sbjct: 139 DVPWEMFVSTVKRLHVLKT 157
>gi|304308205|gb|ADL70415.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 59
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 30/88 (34%)
Query: 241 MHLGVLATASHAVATQTMFVVYYKPRIITRTSQFIISLNKYLEAVNNKFAVGMRYKMRFE 300
M GV+A+ +A T+ MF V YKPR M+FE
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR------------------------------MQFE 31
Query: 301 GEDSPERRFSGTVVGVEDFSPHWKDSKW 328
G+D E+++ GT++GV D SPHWKDS+W
Sbjct: 32 GKDFSEKKYDGTIIGVNDMSPHWKDSEW 59
>gi|110631502|gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
Length = 192
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 540 ISAAADSDG-KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 598
S A D D K+ I+ K + QV P S++S + N KV + G R +
Sbjct: 39 FSEAIDIDKTKTSISGSAKSPPKTQVVGWPPVKASRKSVVARNCKYVKVAVDGAPYLRKV 98
Query: 599 DLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIV--------YTDDEGDMMLVGDDP 647
DL Y L++ LEE+F I+ L+ R ++V Y D +GD MLVGD P
Sbjct: 99 DLEMYGSYQQLLEALEELFSCLTIRNCLNERKLMDLVNGVEYVPTYEDKDGDWMLVGDVP 158
Query: 648 WHEFCNMVKRIFICSSQDVKKMSP 671
W F KR+ + S D ++P
Sbjct: 159 WKMFVESCKRVRLMKSSDAVGLAP 182
>gi|304322552|gb|ADL70763.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322564|gb|ADL70769.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 151
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 645 DDPWHEFCNMVKRIFICSS 663
D PW F + VKR+ + +
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|304322558|gb|ADL70766.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 149
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 64 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 123
Query: 645 DDPWHEFCNMVKRIFICSS 663
D PW F + VKR+ + +
Sbjct: 124 DVPWEMFVSTVKRLHVLKT 142
>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 168
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 644
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 645 DDPWHEFCNMVKRIFICSS 663
D PW F + VKR+ + +
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|429326560|gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
Length = 291
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 526 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 582
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 583 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 628
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSIGGEKRQVTKPSKLLD 197
Query: 629 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+ + Y D EGD MLVGD PW F N VKR+ I + + +
Sbjct: 198 GLSEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLG 243
>gi|356545900|ref|XP_003541371.1| PREDICTED: auxin-responsive protein IAA11-like [Glycine max]
Length = 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 626
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 258 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSK 317
Query: 627 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 318 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAP 367
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA P LD ++ L ++ G WRF++
Sbjct: 3 KEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYS 61
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL+AGD +F RG
Sbjct: 62 YWNSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|356536854|ref|XP_003536948.1| PREDICTED: auxin-responsive protein IAA11 [Glycine max]
Length = 373
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 626
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 251 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGFIIGGERHSK 310
Query: 627 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 311 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAP 360
>gi|449436896|ref|XP_004136228.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
gi|449502842|ref|XP_004161758.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
Length = 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL---IDEL- 613
E +E VQ E+ SK S + + KV M GV +GR L+L YD L IDEL
Sbjct: 225 ESSKETVQ---DENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELF 281
Query: 614 -------------------EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 654
EE + H + +VY D+EGD MLVGD PW F +
Sbjct: 282 HSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVST 341
Query: 655 VKRIFICSSQDV 666
VKR+ + S V
Sbjct: 342 VKRLRVLKSSVV 353
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 582 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 639
R+ KV G + GR+LD++ Y L EL +F ++ +L R+ ++V+ D E D
Sbjct: 52 RTFVKVHKMG-SFGRSLDISQFSSYQELRSELARLFGLENELKDSPRSGSQLVFVDREND 110
Query: 640 MMLVGDDPWHEFCNMVKRIFICSSQDV 666
++L+GDDPW EF V I I S Q+V
Sbjct: 111 VLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|242087139|ref|XP_002439402.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
gi|241944687|gb|EES17832.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
Length = 242
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------------IKGQLHTRT- 627
KV M GV +GR LDL GYD L ++ +F I G L+
Sbjct: 126 VKVNMDGVPIGRKLDLGAHAGYDTLSAAVDHLFRGLLAAQASGSGGEQQPIAGILNGGGG 185
Query: 628 ---KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
++ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 186 GGREYTLVYEDDEGDQMLVGDVPWPMFIASARRLRVLRSSDLNPSS 231
>gi|125559895|gb|EAZ05343.1| hypothetical protein OsI_27548 [Oryza sativa Indica Group]
Length = 246
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 630
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|302763986|ref|XP_002965414.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
gi|300166228|gb|EFJ32834.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
Length = 409
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 559 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 618
K+ ++ + S Q+ +SN KV M G+ +GR +DL + Y L L++MF
Sbjct: 272 KQAAELATPDQGSNGGQAAASSNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 331
Query: 619 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 332 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 391
Query: 662 SSQDV 666
D
Sbjct: 392 KGSDA 396
>gi|294462071|gb|ADE76589.1| unknown [Picea sitchensis]
Length = 86
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Query: 625 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 679
+ T +++YTD+E DMMLVGDDPW EFCN+ +I I + +V+KM+P MFS
Sbjct: 2 SNTGPQVLYTDNEDDMMLVGDDPWQEFCNIACKILIYTHDEVQKMTPS----MFS 52
>gi|115474429|ref|NP_001060811.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|88911333|sp|P0C128.1|IAA25_ORYSJ RecName: Full=Auxin-responsive protein IAA25; AltName:
Full=Indoleacetic acid-induced protein 25
gi|113622780|dbj|BAF22725.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|125597174|gb|EAZ36954.1| hypothetical protein OsJ_21291 [Oryza sativa Japonica Group]
gi|215687000|dbj|BAG90814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 630
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|356522896|ref|XP_003530078.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 219
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 37/127 (29%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIK------------------- 620
K+ M GVA+GR +D+ Y+ L ++E+F ++K
Sbjct: 91 VKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIASSQCCSGQRDSCAG 150
Query: 621 -------------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
G L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 151 GIQNKEQEEKSNTGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 210
Query: 668 KMSPGSK 674
+ GSK
Sbjct: 211 AFTLGSK 217
>gi|224142858|ref|XP_002324753.1| predicted protein [Populus trichocarpa]
gi|222866187|gb|EEF03318.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 568 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF---------- 617
PKE S + N K+ M+GV +GR ++L Y+ L ++E+F
Sbjct: 108 PKEGSSLKPDSFRNDLFVKINMEGVPIGRKINLNAYDSYEKLSVAIDELFRGLLAETADP 167
Query: 618 --DIK--------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
D K G + ++ +VY D+EGD +LVGD PWH F + KR+ + S ++
Sbjct: 168 RNDKKVKEANANAGSVSGSGEYTLVYEDNEGDRILVGDVPWHMFVSTAKRLRVLKSTEI 226
>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 622
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KVLT SD + ++HA P L+ NQ+ + +D +G WRF++ +
Sbjct: 32 HMFDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQNGTVLDF--QDRNGKMWRFRYSYW 88
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV K+L AGDT F RG
Sbjct: 89 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|226504822|ref|NP_001149993.1| LOC100283620 [Zea mays]
gi|195635913|gb|ACG37425.1| IAA6 - auxin-responsive Aux/IAA family member [Zea mays]
gi|414880576|tpg|DAA57707.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 1 [Zea
mays]
gi|414880577|tpg|DAA57708.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 2 [Zea
mays]
Length = 357
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 570 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ----- 622
E+ K+ K+ M G+ +GR +DL Y+ L ++E+F ++ Q
Sbjct: 222 EASRKEKPACKKNPLVKINMDGIPIGRKVDLAAYDSYERLSLGVKELFHGFLQAQKDMSP 281
Query: 623 ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 673
L ++ +VY D+EGD MLVGD PW+ F + KR+ + S ++ K G+
Sbjct: 282 TAGKIFSQLLDGSGEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELAKGLVGT 341
Query: 674 KLPMFSI 680
+ P ++
Sbjct: 342 RPPQIAV 348
>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
Length = 74
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 292 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 333
G+R++MRFEGE++ ERRF+GT+V E+ P W DS WR LKV
Sbjct: 15 GVRFRMRFEGEEALERRFTGTIVRCENLDPLWPDSSWRYLKV 56
>gi|302822822|ref|XP_002993067.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
gi|300139159|gb|EFJ05906.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
Length = 344
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 628
KV M GV +GR ++L T Y+ L LEEMF I GQ L + TK
Sbjct: 224 VKVYMDGVPIGRKVNLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 283
Query: 629 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 284 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 332
>gi|297821108|ref|XP_002878437.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
gi|297324275|gb|EFH54696.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 574 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 627
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + ++ +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEEMCSEK 133
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|365818553|gb|AEX00365.1| IAA26 [Solanum lycopersicum]
Length = 287
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 621
K+ M G+ +GR +DL Y L ++++F I G
Sbjct: 172 KINMDGIPIGRKVDLKAYDSYHKLSSAVDQLFRGLVAAQNDSSAGGNNEKKEDEEKAISG 231
Query: 622 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ ++ +K
Sbjct: 232 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSTLTRATK 284
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 154
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYS 94
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRC 223
+ + +++T GWS FV KRL AGDT F RG L + RC
Sbjct: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRC 143
>gi|357139461|ref|XP_003571300.1| PREDICTED: auxin-responsive protein IAA25-like [Brachypodium
distachyon]
Length = 245
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRTKWE--------- 630
KV ++G AVGR ++L GY L L+ MF D G++ TR E
Sbjct: 146 VKVNLEGYAVGRKINLAAHSGYASLSAALQSMFHGFLSDGYGRIATRDDEEDQLGMMIKN 205
Query: 631 --IVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
++Y D+EGD MLVGD PW F VKR++I
Sbjct: 206 YILLYEDNEGDRMLVGDVPWEMFIASVKRLYIA 238
>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
Length = 1203
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 213 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRIITRTS 272
E L GVR RQQ+S+PSSV+S+ S+H+GVLA SHA A ++ F ++Y PR S
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRAC--PS 557
Query: 273 QFIISLN 279
+FI S N
Sbjct: 558 KFISSAN 564
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 609 LIDE--LEEMFDIKGQLHTR--TKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 656
L++E +E M ++ L+ + W++VY D E D++LVGDDPW+ ++++
Sbjct: 985 LVNEKAIECMLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPWNTMGSILQ 1036
>gi|357139129|ref|XP_003571137.1| PREDICTED: auxin-responsive protein IAA7-like [Brachypodium
distachyon]
Length = 274
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 22/103 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-------------------EEMFDIKGQL 623
K+ M G+ +GR +DLT L Y+ L +D+L +E+ I G L
Sbjct: 156 KINMDGIPIGRKIDLTALDSYEKLCVAVDKLFRHLLAAQNDPPAAGTECTQEVVAISGLL 215
Query: 624 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 216 DGTGEYTLVYEDYEGDRVLVGDIPWGMFVSSVKRLRVLKTSDL 258
>gi|195637724|gb|ACG38330.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 628
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 629 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|296083735|emb|CBI23724.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 536 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 592
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 114 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 170
Query: 593 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 632
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 171 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 230
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 231 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 269
>gi|226508838|ref|NP_001145863.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
gi|219884739|gb|ACL52744.1| unknown [Zea mays]
gi|413949356|gb|AFW82005.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 628
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 629 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|226501382|ref|NP_001147149.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195607742|gb|ACG25701.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------------IKGQLHTRTKW 629
KV M GV +GR LDL GYD L ++ +F + G L+ ++
Sbjct: 117 KVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLAAQTSGPDGERQAVAGILNGGGEY 176
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
+VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 177 TLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 217
>gi|302788514|ref|XP_002976026.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
gi|300156302|gb|EFJ22931.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
Length = 410
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 559 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 618
K+ ++ + S Q+ ++N KV M G+ +GR +DL + Y L L++MF
Sbjct: 273 KQAAELATPDQGSNGGQAAASNNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 332
Query: 619 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 661
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 333 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 392
Query: 662 SSQDV 666
D
Sbjct: 393 KGSDA 397
>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 622
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 622
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 46 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 104
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 105 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|302801263|ref|XP_002982388.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
gi|300149980|gb|EFJ16633.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
Length = 431
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--DIKGQLHT------------------ 625
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 626 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|15228681|ref|NP_191769.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
gi|46396010|sp|Q9M1R4.1|IAA30_ARATH RecName: Full=Auxin-responsive protein IAA30; AltName:
Full=Indoleacetic acid-induced protein 30
gi|6899920|emb|CAB71870.1| auxin-induced protein homolog [Arabidopsis thaliana]
gi|49616377|gb|AAT67085.1| IAA30 [Arabidopsis thaliana]
gi|225898739|dbj|BAH30500.1| hypothetical protein [Arabidopsis thaliana]
gi|284794605|gb|ADB93675.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794607|gb|ADB93676.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794609|gb|ADB93677.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794611|gb|ADB93678.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794613|gb|ADB93679.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322669|gb|ADL70787.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322671|gb|ADL70788.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322673|gb|ADL70789.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322675|gb|ADL70790.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322677|gb|ADL70791.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322679|gb|ADL70792.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322681|gb|ADL70793.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322683|gb|ADL70794.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322685|gb|ADL70795.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322687|gb|ADL70796.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322689|gb|ADL70797.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322691|gb|ADL70798.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322693|gb|ADL70799.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|332646789|gb|AEE80310.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
Length = 172
Score = 62.8 bits (151), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 574 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 627
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + + +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEK 133
Query: 628 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|414872892|tpg|DAA51449.1| TPA: hypothetical protein ZEAMMB73_766126 [Zea mays]
Length = 271
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 16 DDLYRELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQEL 59
D L+ ELWKACAGPL VP GQ+VYY PQGH+EQ + +EL
Sbjct: 46 DALFVELWKACAGPLSCVPPLGQKVYYLPQGHIEQYRSIELEEL 89
>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 630
KV M GVA+GR +DL+ Y++L LE+MF + Q L +++
Sbjct: 127 KVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSEFV 186
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 676
+ Y D EGD MLVGD PW F VKR+ + + + ++ ++ P
Sbjct: 187 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQEP 232
>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
Length = 292
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 622
K+ M G+ +GR +DL L YD L +D+L +E I G
Sbjct: 173 KINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVAISGL 232
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 233 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 276
>gi|302766253|ref|XP_002966547.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
gi|300165967|gb|EFJ32574.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
Length = 431
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--DIKGQLHT------------------ 625
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 626 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|302780269|ref|XP_002971909.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
gi|300160208|gb|EFJ26826.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
Length = 345
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 628
KV M GV +GR + L T Y+ L LEEMF I GQ L + TK
Sbjct: 225 VKVYMDGVPIGRKVSLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 284
Query: 629 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 285 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 333
>gi|359477690|ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
vinifera]
Length = 321
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 536 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 592
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 152 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 208
Query: 593 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 632
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 209 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 268
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 269 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 307
>gi|351723637|ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycine max]
gi|255626619|gb|ACU13654.1| unknown [Glycine max]
Length = 217
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 617
K+ M GV +GR +D+ Y+ L ++E+F
Sbjct: 89 VKINMDGVPIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIGSSQCCSGQRDSCAG 148
Query: 618 ----------DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 667
KG L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 149 GIQNKEQEEKSNKGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 208
Query: 668 KMSPGSK 674
+ GSK
Sbjct: 209 AFTLGSK 215
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 519 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 578
SAP+ V+ T ++ + + A+++ + + V +S
Sbjct: 26 SAPAVAFGVTKATLPLFLLRDDDGDDSGEDGTAGARDWGTSNKRKRLVGWPPVKSAHRPR 85
Query: 579 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 638
+ + KV+M+GV +GR +DL+ Y L L MF +H + + Y D +G
Sbjct: 86 SHHNGHVKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFP-SSTVHHADPYAVTYEDGDG 144
Query: 639 DMMLVGDDPWHEFCNMVKRIFIC 661
D MLVGD PW EF KR+ I
Sbjct: 145 DWMLVGDVPWEEFSKSAKRLKIL 167
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 86 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYS 144
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 145 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 178
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ +++T GWS FV KRL AGDT F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|255574879|ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
Length = 318
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK--------- 628
KV M G+ +GR +DL Y+ L LE+MF G+ TK
Sbjct: 201 KVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSS 260
Query: 629 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ + Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 261 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 304
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 116 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 175
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 49 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 107
Query: 176 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 108 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|115435010|ref|NP_001042263.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|75263885|sp|Q9LG86.1|IAA2_ORYSJ RecName: Full=Auxin-responsive protein IAA2; AltName:
Full=Indoleacetic acid-induced protein 2
gi|9049459|dbj|BAA99424.1| putative auxin-induced protein IAA18 [Oryza sativa Japonica Group]
gi|113531794|dbj|BAF04177.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|125569344|gb|EAZ10859.1| hypothetical protein OsJ_00698 [Oryza sativa Japonica Group]
gi|215713409|dbj|BAG94546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 627
K+ M GV +GR +DL GY L ++++F +G L ++
Sbjct: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 178
Query: 628 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 666
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 179 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
>gi|297824785|ref|XP_002880275.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
gi|297326114|gb|EFH56534.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
Length = 167
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 577 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWE 630
C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 71 CHSVGSFYVKVNMEGVPIGRKIDLMSLNGYHDLIRTLDFMFNASILWAEEEDMCNEKSHV 130
Query: 631 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 660
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 131 LTYADKEGDWMMVGDVPWEMFLSTVRRLKI 160
>gi|449465437|ref|XP_004150434.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
gi|449519671|ref|XP_004166858.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
Length = 186
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 560 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 619
++ +QV K++++ + + KV M G R +DL+ GY L+ LE+MF
Sbjct: 69 RKNTLQV--KKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKF 126
Query: 620 K-GQLHTRTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 672
GQ R ++ Y D +GD MLVGD PW F + KR+ I +V +S G
Sbjct: 127 TIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCG 185
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|356503640|ref|XP_003520614.1| PREDICTED: auxin-responsive protein IAA13-like [Glycine max]
Length = 244
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-------KGQ---------------- 622
KV+M G+ +GR +DL Y+ L LE+MFD KG
Sbjct: 121 KVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESATVLTHKGSNGEDHGTEVGADGHSK 180
Query: 623 -LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
LH + + Y D EGD MLVGD PW F N V+R+ I + + ++P
Sbjct: 181 LLHGSSDLVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEANGLAP 230
>gi|302398583|gb|ADL36586.1| ARF domain class transcription factor [Malus x domestica]
Length = 295
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------DIKGQ------LHTRTKW 629
KV M G+ +GR ++L+ Y+ L +LE+MF +++G L ++
Sbjct: 180 KVNMDGIPIGRKVNLSAHSSYEALAQKLEDMFGPSTHGSGGQEMEGATRPSKLLDGSFEF 239
Query: 630 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
+ Y D +GD MLVGD PW F VKR+ I + + ++P
Sbjct: 240 ALTYEDKDGDWMLVGDVPWEMFLGTVKRLRIMRTSEANGLAP 281
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 106 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 164
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 165 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|255548896|ref|XP_002515504.1| ATP binding protein, putative [Ricinus communis]
gi|223545448|gb|EEF46953.1| ATP binding protein, putative [Ricinus communis]
Length = 895
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 580 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI--KGQLHTRTKWEIVYTDDE 637
SN KV+M+GVA+ R +DL Y L + L MF KG + T + + Y D +
Sbjct: 144 SNYKYVKVKMEGVAIARKIDLRLFHSYQTLTNFLISMFGKCEKGDDDSTTNYTLTYQDKD 203
Query: 638 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 681
GD +L GD PW F V+R+ + + + + S K P F +E
Sbjct: 204 GDWLLAGDVPWQTFMESVQRLELVRNGGLPRPSL-CKFPCFLME 246
>gi|225433277|ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
vinifera]
Length = 314
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 536 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 592
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 153 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 209
Query: 593 AVGRALDLTTLVGYDHLIDELEEMF------------DIKGQLHTRTKWEIVYTDDEGDM 640
+GR +DL Y L LE+MF + L +++ + Y D EGD
Sbjct: 210 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPRQSTNPSKLLDGSSEFVLTYEDKEGDW 269
Query: 641 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
MLVGD PW F + VKR+ I + + ++P
Sbjct: 270 MLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 300
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|15226476|ref|NP_182222.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
gi|11131099|sp|O24410.2|IAA20_ARATH RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|13194770|gb|AAK15547.1|AF348576_1 auxin-induced protein IAA20 [Arabidopsis thaliana]
gi|3522954|gb|AAC34236.1| auxin-induced protein (IAA20) [Arabidopsis thaliana]
gi|26449566|dbj|BAC41909.1| putative auxin-induced protein [Arabidopsis thaliana]
gi|330255689|gb|AEC10783.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
Length = 175
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 121 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 180
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 181 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 235
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|449458912|ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
[Cucumis sativus]
Length = 301
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 558 EKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGVAVGRALDLTTLVGYDHLIDELE 614
E+K++Q K++ ++C + KV + GV +GR +DL Y+ L LE
Sbjct: 166 EEKKDQ----SKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 221
Query: 615 EMF------DIKGQ---LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 665
+MF K Q L +++ + Y D EGD MLVGD PW F N V+R+ I + +
Sbjct: 222 DMFFSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVNSVRRLRIMRTSE 281
Query: 666 VKKMSPGSK 674
++P S+
Sbjct: 282 ANGLAPRSQ 290
>gi|363806854|ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycine max]
gi|255642213|gb|ACU21371.1| unknown [Glycine max]
Length = 187
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 509 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 568
G+E+ P ++P + + + S I+ D + S+ ++ + K Q V P
Sbjct: 7 GLEITTELRLGLPGGELPDKNEKMKKRVFSEINQG-DENSSSEEDRKIQTKNQ-VVGWPP 64
Query: 569 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 628
S K++ + + KV M G R +DL GY L LE+ F G
Sbjct: 65 VCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMRKGYSELALALEKFFGCYGIGSALKD 124
Query: 629 WEIV-----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 674
E V Y D +GD MLVGD PW F KR+ I D K P K
Sbjct: 125 EENVVQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDPQPK 175
>gi|413924061|gb|AFW63993.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 294
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 580 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 622
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 169 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 228
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 229 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 277
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 154
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|226509392|ref|NP_001141156.1| hypothetical protein [Zea mays]
gi|194702982|gb|ACF85575.1| unknown [Zea mays]
gi|413924062|gb|AFW63994.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 293
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 580 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 622
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 168 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 227
Query: 623 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 228 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 276
>gi|359480055|ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
Length = 296
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----IKGQLHTR--------TKWEIV 632
KV M G+ +GR +DL+ Y+ L LEEMF + TR + + +
Sbjct: 184 KVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLT 243
Query: 633 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 671
Y D EGD MLVGD PW F +R+ I + D ++P
Sbjct: 244 YEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAP 282
>gi|429326544|gb|AFZ78612.1| hypothetical protein [Populus tomentosa]
Length = 204
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 585 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTR-----TKWEIVYTDDEG 638
KV M G R +DL GY L++ +EEMF K G+ R +++ Y D +G
Sbjct: 110 VKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDG 169
Query: 639 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 670
D MLVGD PW F N KR+ I + + +
Sbjct: 170 DWMLVGDVPWEMFINSCKRLRIMKESEARGLG 201
>gi|304322484|gb|ADL70729.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 174
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|304322486|gb|ADL70730.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|297707657|gb|ADB93651.2| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 173
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 100
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 21 ELWKACAGPLVDVPKQGQRVYYFPQGHMEQLEASTNQELNQRIPLFRLPSKILCRVVNIH 80
ELW ACAGPL+ +PK+G V YFPQGH+EQ + ++ LP + CR++++
Sbjct: 45 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 97
Query: 81 LMA 83
L A
Sbjct: 98 LHA 100
>gi|304322480|gb|ADL70727.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 172
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|304322470|gb|ADL70722.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322476|gb|ADL70725.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322488|gb|ADL70731.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322494|gb|ADL70734.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|2618729|gb|AAB84357.1| IAA20, partial [Arabidopsis thaliana]
Length = 166
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 586 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 639
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 79 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 138
Query: 640 MMLVGDDPWHEFCNMVKRIFI 660
M+VGD PW F + V+R+ I
Sbjct: 139 WMMVGDVPWEMFLSTVRRLKI 159
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 119 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 178
K H F KV+T SD + ++HA P LD + L +D G WRF++
Sbjct: 34 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYS 92
Query: 179 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 212
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 93 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,074,834,633
Number of Sequences: 23463169
Number of extensions: 473573683
Number of successful extensions: 1445448
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 931
Number of HSP's that attempted gapping in prelim test: 1438432
Number of HSP's gapped (non-prelim): 3577
length of query: 694
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 544
effective length of database: 8,839,720,017
effective search space: 4808807689248
effective search space used: 4808807689248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)