Query 005493
Match_columns 694
No_of_seqs 407 out of 3326
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 18:33:21 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/005493.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1999-2003//hhsearch_pdb/005493hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 1.0 1 1 339.0 34.7 293 29-359 12-308 (308)
2 2xn4_A Kelch-like protein 2; s 1.0 1 1 338.6 37.7 293 32-360 6-299 (302)
3 3ii7_A Kelch-like protein 7; p 1.0 1 1 334.6 35.3 283 40-361 10-295 (306)
4 1zgk_A Kelch-like ECH-associat 1.0 1 1 334.0 32.4 281 83-394 9-293 (308)
5 2vpj_A Kelch-like protein 12; 1.0 1 1 330.1 34.1 285 40-360 13-300 (301)
6 4asc_A Kelch repeat and BTB do 1.0 1 1 329.5 26.3 286 41-373 4-306 (315)
7 2woz_A Kelch repeat and BTB do 1.0 1 1 329.5 29.1 293 33-372 7-315 (318)
8 2zwa_A Leucine carboxyl methyl 1.0 1 1 318.4 28.4 292 72-388 375-694 (695)
9 3ii7_A Kelch-like protein 7; p 1.0 1 1 317.4 34.8 263 98-394 11-278 (306)
10 2uvk_A YJHT; unknown function, 1.0 1 1 316.2 29.0 281 83-393 4-347 (357)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=1.00 E-value=1 Score=338.98 Aligned_cols=293 Identities=19% Similarity=0.274 Sum_probs=235.5
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCC-
Q ss_conf 9999987324489959983389999776445567544578888999659930069999875302999999999999587-
Q 005493 29 PIRPPKRNSNPNSECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGE- 107 (694)
Q Consensus 29 p~~~s~r~~~~~~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~- 107 (694)
|..+..++.+..++.||++||. ..........||+ .+++|..++ .+|.+|.+|++++++++||++||.
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~--~~~~~~~~~~~d~------~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~ 80 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGY--FRQSLSYLEAYNP------SNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRN 80 (308)
T ss_dssp ---------CCCCCCEEEECCB--SSSBCCCEEEEET------TTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEE
T ss_pred CEEECCCCCCCCCCEEEEEECC--CCCCCCEEEEECC------CCCEEEECC---CCCCCCCCCEEEEECCEEEEECCCC
T ss_conf 7035773356779989999075--7987632899868------999072898---8972401136999999999987976
Q ss_pred ---CCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCCCC
Q ss_conf ---89977673899987999489932465569999999999753149999899999994206999995179999999993
Q 005493 108 ---SGNGLLDDVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTETEC 184 (694)
Q Consensus 108 ---~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~~~~~~~~v~~yD~~t~~ 184 (694)
.+....+++++||+.+++|+.++++ +.+|..|+++.++++||++||... ....+++++||+.+++
T Consensus 81 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 81 NSPDGNTDSSALDCYNPMTNQWSPCAPM-----------SVPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERDE 148 (308)
T ss_dssp EETTEEEECCCEEEEETTTTEEEECCCC-----------SSCCBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTTE
T ss_pred CCCCCCEECCEEEEECCCCCEEEECCCC-----------CCCCCCCEEEEECCEEEEECCCCC-CCCCCCEEEECCCCCE
T ss_conf 7799981114299998999938587987-----------767632189998999999858779-8645538998899991
Q ss_pred EEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEE
Q ss_conf 99942149999765002999989949998243599964462688417898389822589999976001999989948999
Q 005493 185 WSVVEAKGDIPVARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLI 264 (694)
Q Consensus 185 W~~l~~~g~~p~~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi 264 (694)
|+.++ ++|.+|..|+++.++++||++||.+... .++++++||+.+++|+.+. ++|.+|..|++++++++ ||+
T Consensus 149 W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~-iyv 220 (308)
T 1zgk_A 149 WHLVA---PMLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNC-IYA 220 (308)
T ss_dssp EEECC---CCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTE-EEE
T ss_pred EEECC---CCCCCCCCEEEEEECCEEEEEECCCCCC-CCCEEEEEECCCCEEEECC---CCCCCCCCCEEEEECCE-EEE
T ss_conf 86779---8776432407999999999992878997-5762899908999596689---88776630369998999-999
Q ss_pred ECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCC
Q ss_conf 90889998889099999699929994216999999964089998999999927789987681999998999189922189
Q 005493 265 FGGSSKSKTLNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAETLIFDILKGEWSVAITSP 344 (694)
Q Consensus 265 ~GG~~~~~~~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~~~~~~i~~yd~~t~~W~~l~~~~ 344 (694)
+||.+.....+++++||+.+++|+.+.. +|.+|.+|+++.++++|||+||.+.....+++++||+.+++|+.++.
T Consensus 221 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-- 295 (308)
T 1zgk_A 221 AGGYDGQDQLNSVERYDVETETWTFVAP---MKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR-- 295 (308)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE--
T ss_pred EECCCCCCCCCEEEEEECCCCCEEECCC---CCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEECCC--
T ss_conf 8087899756128999089992888998---99886320899999999999085888635338998089998840689--
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 999888867199999
Q 005493 345 SSSVTSNKGFTLVLV 359 (694)
Q Consensus 345 ~~~p~~r~~~s~v~~ 359 (694)
.|.+|.+|+++++
T Consensus 296 --~p~~r~~~~~~~l 308 (308)
T 1zgk_A 296 --MTSGRSGVGVAVT 308 (308)
T ss_dssp --CSSCCBSCEEEEC
T ss_pred --CCCCCCCCEEEEC
T ss_conf --9987556445869
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=1.00 E-value=1 Score=338.58 Aligned_cols=293 Identities=16% Similarity=0.210 Sum_probs=256.1
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCC
Q ss_conf 99873244899599833899997764455675445788889996599300699998753029999999999995878997
Q 005493 32 PPKRNSNPNSECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNG 111 (694)
Q Consensus 32 ~s~r~~~~~~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~~~~ 111 (694)
+.+|..+..++.||++||.... .......|++ .++.|..++ .+|.+|.+|++++++++||++||..+..
T Consensus 6 ~~~r~~~~~~~~i~v~GG~~~~--~~~~~~~~d~------~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~ 74 (302)
T 2xn4_A 6 TRLRTPMNLPKLMVVVGGQAPK--AIRSVECYDF------KEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSL 74 (302)
T ss_dssp ---------CEEEEEECCBSSS--BCCCEEEEET------TTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSS
T ss_pred CCCCCCCCCCCEEEEECCCCCC--CCCCEEEECC------CCCCEEECC---CCCCCCCCCEEEEECCEEEEEECCCCCC
T ss_conf 6688666778779998798987--7774799847------679585856---5874200161799999999995917986
Q ss_pred CCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEC
Q ss_conf 76738999879994899324655699999999997531499998999999942069999951799999999939994214
Q 005493 112 LLDDVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTETECWSVVEAK 191 (694)
Q Consensus 112 ~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~~~~~~~~v~~yD~~t~~W~~l~~~ 191 (694)
..+++++||+.+++|+.++++ +.+|.+|+++.++++||++||... ....+++++||+.+++|+.++
T Consensus 75 ~~~~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~-- 140 (302)
T 2xn4_A 75 RVRTVDSYDPVKDQWTSVANM-----------RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVA-- 140 (302)
T ss_dssp BCCCEEEEETTTTEEEEECCC-----------SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEEC--
T ss_pred CCCCEEEECCCCCCEEECCCC-----------CCCCCCEEEEEECCEEEEECCCCC-CCCCCEEEEEECCCCEEEECC--
T ss_conf 654168988999904127987-----------765010589998999999758789-965766999928999184359--
Q ss_pred CCCCCCCEEEEEEEECCEEEEECCCCCCC-CCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCC
Q ss_conf 99997650029999899499982435999-64462688417898389822589999976001999989948999908899
Q 005493 192 GDIPVARSGHTVVRASSVLILFGGEDGKR-RKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLIFGGSSK 270 (694)
Q Consensus 192 g~~p~~R~~~s~~~~~~~iyv~GG~~~~~-~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi~GG~~~ 270 (694)
++|.+|..|+++.++++||++||.+... ..++++++||+.+++|+.+. ++|.+|.+|++++++++ ||++||.+.
T Consensus 141 -~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~-iyv~GG~~~ 215 (302)
T 2xn4_A 141 -PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNL-LYAVGGHDG 215 (302)
T ss_dssp -CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE-EEEECCBSS
T ss_pred -CCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECC---CCCCCCCCCCEEEECCE-EEEECCCCC
T ss_conf -9987244765899999999983878899850157999818999478789---87666234527999999-999888799
Q ss_pred CCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC
Q ss_conf 98889099999699929994216999999964089998999999927789987681999998999189922189999888
Q 005493 271 SKTLNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAETLIFDILKGEWSVAITSPSSSVTS 350 (694)
Q Consensus 271 ~~~~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~~~~~~i~~yd~~t~~W~~l~~~~~~~p~~ 350 (694)
....+++++||+.+++|+.+..+ |.+|.+|+++.++++|||+||.+.....+++++||+.+++|+.++ ...+.+
T Consensus 216 ~~~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~~~~~ 289 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNAWRQVADM---NMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS---SCMSTG 289 (302)
T ss_dssp SSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS---SCCSSC
T ss_pred CCCCCEEEEEECCCCCEEECCCC---CCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEECCCCCEEEECC---CCCCCC
T ss_conf 84266499994899978467988---881126718998999999888577743632799838999389887---346766
Q ss_pred CCCCEEEEEE
Q ss_conf 8671999995
Q 005493 351 NKGFTLVLVQ 360 (694)
Q Consensus 351 r~~~s~v~~~ 360 (694)
|..|+++++.
T Consensus 290 r~~~~~~~~~ 299 (302)
T 2xn4_A 290 RSYAGVTVID 299 (302)
T ss_dssp CBSCEEEEEE
T ss_pred CCCCEEEEEC
T ss_conf 4553689743
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=1.00 E-value=1 Score=334.61 Aligned_cols=283 Identities=18% Similarity=0.219 Sum_probs=250.3
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
Q ss_conf 89959983389999776445567544578888999659930069999875302999999999999587899776738999
Q 005493 40 NSECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVL 119 (694)
Q Consensus 40 ~~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~~~~~~~~v~~y 119 (694)
..+.||++||... ......||+ .+++|..++ ++|.+|.+|++++++++||++||.. ....+++++|
T Consensus 10 ~~~~l~~~GG~~~----~~~~~~~d~------~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~ 75 (306)
T 3ii7_A 10 KHDYRIALFGGSQ----PQSCRYFNP------KDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCY 75 (306)
T ss_dssp CCCEEEEEECCSS----TTSEEEEET------TTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEE
T ss_pred CCCEEEEEECCCC----CCEEEEECC------CCCCEECCC---CCCCCCCEEEEEEECCEEEEEECCC-CCCCCEEEEE
T ss_conf 4344999958778----851898669------889783078---8875456368999999999993889-9875337998
Q ss_pred ECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCE
Q ss_conf 87999489932465569999999999753149999899999994206999995179999999993999421499997650
Q 005493 120 NFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTETECWSVVEAKGDIPVARS 199 (694)
Q Consensus 120 d~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~~~~~~~~v~~yD~~t~~W~~l~~~g~~p~~R~ 199 (694)
|+.+++|..++++ +.+|.+|+++.++++||++||........+++++||+.+++|+.++ ++|.+|.
T Consensus 76 d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~ 141 (306)
T 3ii7_A 76 NVVKDSWYSKLGP-----------PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRC 141 (306)
T ss_dssp ETTTTEEEEEECC-----------SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCB
T ss_pred ECCCCEEEECCCC-----------CCCCCCEEEEEECCEEEEECCCCCCCCEEEEEEEEECCCCCEEECC---CCCCCCC
T ss_conf 2799929778988-----------7643210699999999998988778847006999818999568589---9767761
Q ss_pred EEEEEEECCEEEEECCCCCCCC---CCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCE
Q ss_conf 0299998994999824359996---4462688417898389822589999976001999989948999908899988890
Q 005493 200 GHTVVRASSVLILFGGEDGKRR---KLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLIFGGSSKSKTLND 276 (694)
Q Consensus 200 ~~s~~~~~~~iyv~GG~~~~~~---~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi~GG~~~~~~~~~ 276 (694)
.|+++.++++||++||...... .++++++||+.+++|+.+. ++|.+|..|+++.++++ ||++||.+.....++
T Consensus 142 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 142 SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDK-IFAVGGQNGLGGLDN 217 (306)
T ss_dssp SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE-EEEECCEETTEEBCC
T ss_pred EEEEEEECCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEECC---CCCCHHHCCEEEEECCE-EEEEECCCCCCCCCE
T ss_conf 54799989999998787899976621133898479989277998---76330226269999999-999959888987764
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEE
Q ss_conf 99999699929994216999999964089998999999927789987681999998999189922189999888867199
Q 005493 277 LYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAETLIFDILKGEWSVAITSPSSSVTSNKGFTL 356 (694)
Q Consensus 277 i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~~~~~~i~~yd~~t~~W~~l~~~~~~~p~~r~~~s~ 356 (694)
+++||+.+++|+.+.. +|.+|.+|+++.++++|||+||.+.....+++++||+.+++|+.++. .+.+|.+|++
T Consensus 218 ~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~----~~~~r~~~~~ 290 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVSP---MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK----VRAFPVTSCL 290 (306)
T ss_dssp EEEEETTTTEEEECCC---CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE----EECCSCTTCE
T ss_pred EEEEECCCCCEEECCC---CCCCCCCEEEEEECCEEEEEECCCCCEEEEEEEEECCCCCEEEECCC----CCCCCCEEEE
T ss_conf 9996279996878788---98776620599989999999376798121248997589991786897----6665661489
Q ss_pred EEEEE
Q ss_conf 99955
Q 005493 357 VLVQH 361 (694)
Q Consensus 357 v~~~~ 361 (694)
+++..
T Consensus 291 ~~~~~ 295 (306)
T 3ii7_A 291 ICVVD 295 (306)
T ss_dssp EEEEE
T ss_pred EEECC
T ss_conf 99788
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=1.00 E-value=1 Score=334.01 Aligned_cols=281 Identities=17% Similarity=0.218 Sum_probs=248.6
Q ss_pred CCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
Q ss_conf 99998753029999999999995878997767389998799948993246556999999999975314999989999999
Q 005493 83 GDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLV 162 (694)
Q Consensus 83 ~~~P~~R~~~s~~~v~~~lyi~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~ 162 (694)
.+.|.+|..++++.+++.||+|||. ....++++++||+.+++|..++++ +.+|.+|+++..+++||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~lyv~ 76 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADL-----------QVPRSGLAGCVVGGLLYAV 76 (308)
T ss_dssp ------------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCC-----------SSCCBSCEEEEETTEEEEE
T ss_pred CCCCEEECCCCCCCCCCEEEEEECC-CCCCCCEEEEECCCCCEEEECCCC-----------CCCCCCCEEEEECCEEEEE
T ss_conf 4587035773356779989999075-798763289986899907289889-----------7240113699999999998
Q ss_pred CCCC---CCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEEC
Q ss_conf 4206---9999951799999999939994214999976500299998994999824359996446268841789838982
Q 005493 163 GGKT---DSGSDRVSVWTFDTETECWSVVEAKGDIPVARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPL 239 (694)
Q Consensus 163 GG~~---~~~~~~~~v~~yD~~t~~W~~l~~~g~~p~~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l 239 (694)
||.. ......+++++||+.+++|+.++ ++|.+|..|+++.++++||++||.+.. ..++++++||+.+++|+.+
T Consensus 77 GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 77 GGRNNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CCEEEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEEC
T ss_pred CCCCCCCCCCEECCEEEEECCCCCEEEECC---CCCCCCCCCEEEEECCEEEEECCCCCC-CCCCCEEEECCCCCEEEEC
T ss_conf 797677999811142999989999385879---877676321899989999998587798-6455389988999918677
Q ss_pred CCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCC
Q ss_conf 25899999760019999899489999088999888909999969992999421699999996408999899999992778
Q 005493 240 HCTGTGPSPRSNHVAALYDDKNLLIFGGSSKSKTLNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGS 319 (694)
Q Consensus 240 ~~~g~~P~~r~~~s~~~~~~~~lyi~GG~~~~~~~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~ 319 (694)
. ++|.+|..|+++++++. ||++||.+....++++++||+.+++|+.++.+ |.+|.+|+++.++++|||+||.+
T Consensus 153 ~---~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~ 225 (308)
T 1zgk_A 153 A---PMLTRRIGVGVAVLNRL-LYAVGGFDGTNRLNSAECYYPERNEWRMITAM---NTIRSGAGVCVLHNCIYAAGGYD 225 (308)
T ss_dssp C---CCSSCCBSCEEEEETTE-EEEECCBCSSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCBC
T ss_pred C---CCCCCCCCEEEEEECCE-EEEEECCCCCCCCCEEEEEECCCCEEEECCCC---CCCCCCCEEEEECCEEEEEECCC
T ss_conf 9---87764324079999999-99992878997576289990899959668988---77663036999899999980878
Q ss_pred CCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCC-CCCEEEEECCCCCCCCC
Q ss_conf 9987681999998999189922189999888867199999556982999994899999-99289997746876778
Q 005493 320 RKKRHAETLIFDILKGEWSVAITSPSSSVTSNKGFTLVLVQHKEKDFLVAFGGIKKEP-SNQVEVLSIEKNESSMG 394 (694)
Q Consensus 320 ~~~~~~~i~~yd~~t~~W~~l~~~~~~~p~~r~~~s~v~~~~~~~~~I~v~GG~~~~~-~~~i~~~d~~~~~w~~~ 394 (694)
.....+++++||+.+++|+.+. ..|.+|..|+++.+. +.||++||.+... .+++++||+.+++|...
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~----~~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVA----PMKHRRSALGITVHQ----GRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECC----CCSSCCBSCEEEEET----TEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEECC----CCCCCCCCEEEEEEC----CEEEEECCCCCCCCCCEEEEECCCCCEEEEC
T ss_conf 9975612899908999288899----899886320899999----9999990858886353389980899988406
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=1.00 E-value=1 Score=330.12 Aligned_cols=285 Identities=19% Similarity=0.332 Sum_probs=249.8
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
Q ss_conf 89959983389999776445567544578888999659930069999875302999999999999587899776738999
Q 005493 40 NSECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVL 119 (694)
Q Consensus 40 ~~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~~~~~~~~v~~y 119 (694)
.++.||++||.............|++ .+++|..++ .+|.+|.+|++++++++||++||..+....+++++|
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~------~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDP------KTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEET------TTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred CCCEEEEEECCCCCCCCEEEEEEECC------CCCEEEECC---CCCHHHCCCCEEEECCEEEEECCCCCCCCCCEEEEE
T ss_conf 79989999072688864017999858------999087578---887112034389999999998578999628638998
Q ss_pred ECCCCC---EEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCC
Q ss_conf 879994---89932465569999999999753149999899999994206999995179999999993999421499997
Q 005493 120 NFDRFS---WTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWTFDTETECWSVVEAKGDIPV 196 (694)
Q Consensus 120 d~~t~~---W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~~~~~~~~v~~yD~~t~~W~~l~~~g~~p~ 196 (694)
|+.++. |+.++++ +.+|..|+++..+++||++||... ....+++++||+.+++|+.++ ++|.
T Consensus 84 d~~~~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~---~~p~ 148 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPM-----------NVRRGLAGATTLGDMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLG---DMQT 148 (301)
T ss_dssp ETTCCTTCCCEEECCC-----------SSCCBSCEEEEETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEE---ECSS
T ss_pred ECCCCCCCEEEECCCC-----------CCCCCCEEEEEECCEEEEECCCCC-CCCCCEEEEECCCCCEEEECC---CCCC
T ss_conf 7889987754799987-----------777632059999999999836479-851543999858999087889---9887
Q ss_pred CCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCE
Q ss_conf 65002999989949998243599964462688417898389822589999976001999989948999908899988890
Q 005493 197 ARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLIFGGSSKSKTLND 276 (694)
Q Consensus 197 ~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi~GG~~~~~~~~~ 276 (694)
+|..|++++++++||++||.+.. ..++++++||+.+++|+.+. ++|.+|..|+++.++++ ||++||.+.....++
T Consensus 149 ~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~ 223 (301)
T 2vpj_A 149 AREGAGLVVASGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDH-IYVVGGFDGTAHLSS 223 (301)
T ss_dssp CCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE-EEEECCBCSSSBCCC
T ss_pred CCCCCEEEEECCEEEEECCCCCC-CCCCEEEEEECCCCCEEECC---CCCCCCCCCEEEEECCE-EEEEECCCCCCCCCE
T ss_conf 76665689999999998787998-43655999938999577478---98743014059999999-999918889866653
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEE
Q ss_conf 99999699929994216999999964089998999999927789987681999998999189922189999888867199
Q 005493 277 LYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAETLIFDILKGEWSVAITSPSSSVTSNKGFTL 356 (694)
Q Consensus 277 i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~~~~~~i~~yd~~t~~W~~l~~~~~~~p~~r~~~s~ 356 (694)
+++||+.+++|+.+.. +|.+|.+|+++.++++|||+||.+.....+++++||+.+++|+.+.. .|.+|..|++
T Consensus 224 v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~----~~~~r~~~~~ 296 (301)
T 2vpj_A 224 VEAYNIRTDSWTTVTS---MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTS----MGTQRCDAGV 296 (301)
T ss_dssp EEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEE----EEEEEESCEE
T ss_pred EEEEECCCCCEEECCC---CCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEECCCCCEEEECCC----CCCCCCCCEE
T ss_conf 8998078796787899---99765240599999999998175878646408998688895989688----8745444338
Q ss_pred EEEE
Q ss_conf 9995
Q 005493 357 VLVQ 360 (694)
Q Consensus 357 v~~~ 360 (694)
+++.
T Consensus 297 ~~~~ 300 (301)
T 2vpj_A 297 CVLR 300 (301)
T ss_dssp EEEE
T ss_pred EEEC
T ss_conf 9928
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=1.00 E-value=1 Score=329.51 Aligned_cols=286 Identities=15% Similarity=0.199 Sum_probs=242.5
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCC----C--CCCCC
Q ss_conf 99599833899997764455675445788889996599300699998753029999999999995878----9--97767
Q 005493 41 SECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGES----G--NGLLD 114 (694)
Q Consensus 41 ~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~----~--~~~~~ 114 (694)
.+.|+++|| .....||+ .+++|...+ .+.|.+|.+|++++++++||++||.. . ....+
T Consensus 4 ~~~l~~~GG--------~~~~~yd~------~~~~W~~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 67 (315)
T 4asc_A 4 QDLIFMISE--------EGAVAYDP------AANECYCAS--LSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSA 67 (315)
T ss_dssp EEEEEEEET--------TEEEEEET------TTTEEEEEE--CCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEE
T ss_pred CEEEEEECC--------CCEEEECC------CCCEEECCC--CCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCC
T ss_conf 238999858--------71599888------888486378--89998756507999799899986713478887566626
Q ss_pred CEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCC--CCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 38999879994899324655699999999997531499998999999942069--9999517999999999399942149
Q 005493 115 DVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTD--SGSDRVSVWTFDTETECWSVVEAKG 192 (694)
Q Consensus 115 ~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~--~~~~~~~v~~yD~~t~~W~~l~~~g 192 (694)
++++||+.+++|+.++++ +.+|.+|+++..+++||++||... .....+++++||+.+++|+.++
T Consensus 68 ~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--- 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPL-----------PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD--- 133 (315)
T ss_dssp EEEEEETTTTEEEECCCB-----------SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---
T ss_pred CEEEECCCCCEEEECCCC-----------CCCHHCEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEECC---
T ss_conf 569965999929989999-----------860220039999999999949867899812350999879989674779---
Q ss_pred CCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCC
Q ss_conf 99976500299998994999824359996446268841789838982258999997600199998994899990889998
Q 005493 193 DIPVARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLIFGGSSKSK 272 (694)
Q Consensus 193 ~~p~~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi~GG~~~~~ 272 (694)
++|.+|.+|+++.++++||++||.......++++++||+.+++|+.+. ++|.+|..|++++++++ ||++||.+...
T Consensus 134 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~-iyv~GG~~~~~ 209 (315)
T 4asc_A 134 PLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGR-IIVAAGVTDTG 209 (315)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTE-EEEEEEECSSS
T ss_pred CCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCCEEEECC---CCCCCHHCEEEEEECCE-EEEEECCCCCC
T ss_conf 999764240689999999999687899964342899807889388899---99980205689999999-99993658998
Q ss_pred CCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCC---------CCCCEEEEEECCCCCEEEEECC
Q ss_conf 8890999996999299942169999999640899989999999277899---------8768199999899918992218
Q 005493 273 TLNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRK---------KRHAETLIFDILKGEWSVAITS 343 (694)
Q Consensus 273 ~~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~---------~~~~~i~~yd~~t~~W~~l~~~ 343 (694)
..+++++||+.+++|+.++. +|.+|.+|+++.++++|||+||.+.. ...+++++||+.+++|+.+.
T Consensus 210 ~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-- 284 (315)
T 4asc_A 210 LTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL-- 284 (315)
T ss_dssp EEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--
T ss_pred CCCEEEEEECCCCEEEECCC---CCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHC--
T ss_conf 65328999789994988999---9885444069999999999999556676775114543471899518879014436--
Q ss_pred CCCCCCCCCCCEEEEEEECCCCEEEEECCC
Q ss_conf 999988886719999955698299999489
Q 005493 344 PSSSVTSNKGFTLVLVQHKEKDFLVAFGGI 373 (694)
Q Consensus 344 ~~~~p~~r~~~s~v~~~~~~~~~I~v~GG~ 373 (694)
+.+|.+|+++++. +.||++...
T Consensus 285 ----~~~r~~~~~~~~~----~~l~v~~~~ 306 (315)
T 4asc_A 285 ----REIAYAAGATFLP----VRLNVLRLT 306 (315)
T ss_dssp ----SCSSCCSSCEEEE----EEECGGGSE
T ss_pred ----CCCCCCCCEEEEC----CEEEEEEEH
T ss_conf ----6776763048867----778999931
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=329.45 Aligned_cols=293 Identities=19% Similarity=0.246 Sum_probs=248.3
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCC--C
Q ss_conf 98732448995998338999977644556754457888899965993006999987530299999999999958789--9
Q 005493 33 PKRNSNPNSECVAPSSNHADDRDCECTIAGPEVSNGTSGNSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESG--N 110 (694)
Q Consensus 33 s~r~~~~~~~~i~i~GG~~~~~~~~~~~~~~d~~~~~~~~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~~--~ 110 (694)
.+|+.+...+.|+++||.. ...||+ .+++|...+. +.|.+|.+|++++++++||++||... .
T Consensus 7 ~~r~~~~~~~~i~~~GG~~--------~~~yd~------~~~~W~~~~~--~~~~~r~~~~~~~~~~~lyv~GG~~~~~~ 70 (318)
T 2woz_A 7 IPRHGMFVKDLILLVNDTA--------AVAYDP------MENECYLTAL--AEQIPRNHSSIVTQQNQVYVVGGLYVDEE 70 (318)
T ss_dssp SCCCCCSEEEEEEEECSSE--------EEEEET------TTTEEEEEEE--CTTSCSSEEEEECSSSCEEEEESSCC---
T ss_pred CCCCCCEECCHHHHCCCCC--------EEEECC------CCCCEECCCC--CCCCCCCCEEEEEECCEEEEECCCCCCCC
T ss_conf 6545502104143214652--------089889------8881251557--76677652479998998999878654755
Q ss_pred ----CCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCC-CCCCCCEEEEEECCCCCE
Q ss_conf ----776738999879994899324655699999999997531499998999999942069-999951799999999939
Q 005493 111 ----GLLDDVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTD-SGSDRVSVWTFDTETECW 185 (694)
Q Consensus 111 ----~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~-~~~~~~~v~~yD~~t~~W 185 (694)
...+++++||+.+++|..++++ +.+|.+|+++..+++||++||... .....+++|+||+.+++|
T Consensus 71 ~~~~~~~~~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 139 (318)
T 2woz_A 71 NKDQPLQSYFFQLDNVSSEWVGLPPL-----------PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKW 139 (318)
T ss_dssp ----CCCBEEEEEETTTTEEEECSCB-----------SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred CCCCCCCCCEEEEECCCCCEEECCCC-----------CCCCCCCCEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCCE
T ss_conf 56787633089981789968899899-----------7643316369989989998086689985106299990899978
Q ss_pred EEEEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 99421499997650029999899499982435999644626884178983898225899999760019999899489999
Q 005493 186 SVVEAKGDIPVARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALYDDKNLLIF 265 (694)
Q Consensus 186 ~~l~~~g~~p~~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~~~~lyi~ 265 (694)
+.++ ++|.+|.+|++++++++||++||.......++++++||+.+++|+.+. ++|.+|..|++++++++ ||++
T Consensus 140 ~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~-iyv~ 212 (318)
T 2woz_A 140 SEVK---NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGK-IVIA 212 (318)
T ss_dssp EEEC---CCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE-EEEE
T ss_pred EECC---CCCCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCEEEECC---CCCCCCCCCEEEEECCE-EEEE
T ss_conf 5778---899754543799989999998477789984563999948999797899---99977001049999999-9998
Q ss_pred CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCC---------CCCCEEEEEECCCCC
Q ss_conf 08899988890999996999299942169999999640899989999999277899---------876819999989991
Q 005493 266 GGSSKSKTLNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRK---------KRHAETLIFDILKGE 336 (694)
Q Consensus 266 GG~~~~~~~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~---------~~~~~i~~yd~~t~~ 336 (694)
||.+.....+++++||+.+++|+.+..+ |.+|.+|+++.++++|||+||.... ...+++|+||+.+++
T Consensus 213 GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 213 GGVTEDGLSASVEAFDLKTNKWEVMTEF---PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEETTEEEEEEEEEETTTCCEEECCCC---SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred CCCCCCCCCCEEEEEECCCCEEEECCCC---CCCCCCEEEEEECCEEEEECCEECCCCCCCEECCCEEEEEEEEECCCCE
T ss_conf 4728997453289998999929889999---9865635899989999999896456788760233200049998588887
Q ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECC
Q ss_conf 899221899998888671999995569829999948
Q 005493 337 WSVAITSPSSSVTSNKGFTLVLVQHKEKDFLVAFGG 372 (694)
Q Consensus 337 W~~l~~~~~~~p~~r~~~s~v~~~~~~~~~I~v~GG 372 (694)
|+.+ .+.+|.+|+++++. +.||++..
T Consensus 290 W~~~------~~~~r~~~~~~~~~----~~iyi~~~ 315 (318)
T 2woz_A 290 WAGM------LKEIRYASGASCLA----TRLNLFKL 315 (318)
T ss_dssp EEEE------ESCCGGGTTCEEEE----EEEEGGGC
T ss_pred EHHH------CCCCCCCCCCEEEC----CEEEEEEE
T ss_conf 0121------45563330433537----78999994
No 8
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=1.00 E-value=1 Score=318.40 Aligned_cols=292 Identities=15% Similarity=0.183 Sum_probs=234.4
Q ss_pred CCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCEEECC-CCCCCCCCCCCCCCCCCCCE
Q ss_conf 99965993006999987530299999999999958789977673899987999489932-46556999999999975314
Q 005493 72 NSENWMVLSIAGDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVLNFDRFSWTAAS-SKLYLSPSSLPLKIPACRGH 150 (694)
Q Consensus 72 ~s~~W~~l~~~~~~P~~R~~~s~~~v~~~lyi~GG~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~~~~~~~~~~p~r~~~ 150 (694)
...+|...+ ..|.+|++++++ ++++||++||... ...+++++||+.+++|..++ ++.. ...+.+|.+|
T Consensus 375 ~~~~~~~~~---~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~------~~~p~~R~~h 443 (695)
T 2zwa_A 375 EDYQLLECE---CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSS------SEVPVARMCH 443 (695)
T ss_dssp SSEEEEECC---CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCC------SCCCCCCBSC
T ss_pred CCEEEECCC---CCCCCCEEEEEE-ECCEEEEECCCCC-CCCCCEEEEECCCCEEEEECCCCCC------CCCCCCCCCE
T ss_conf 753675168---899883568998-7999999899898-8767679998899939981257877------8999654511
Q ss_pred EEEEE--CCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEE-CCEEEEECCCCCCCCCCCCEE
Q ss_conf 99998--999999942069999951799999999939994214999976500299998-994999824359996446268
Q 005493 151 SLISW--GKKVLLVGGKTDSGSDRVSVWTFDTETECWSVVEAKGDIPVARSGHTVVRA-SSVLILFGGEDGKRRKLNDLH 227 (694)
Q Consensus 151 s~v~~--~~~Iyv~GG~~~~~~~~~~v~~yD~~t~~W~~l~~~g~~p~~R~~~s~~~~-~~~iyv~GG~~~~~~~~~~i~ 227 (694)
+++.+ +++||++||........+++|+||+.+++|+.++ ++|.+|++|+++++ +++||+|||.+... +++
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~ 516 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----AML 516 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----SEE
T ss_pred EEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEECC---CCCCCCCCCEEEEECCCEEEEECCCCCCC----CEE
T ss_conf 78998659989998588899985463799748988189899---99987503447997699899988877999----899
Q ss_pred EEECCCCCEEECCCCCCCCCCCCEEEEEEEC---CCEEEEECCCCCC--CCCCEEEEEECCCCC------EEEEECCCCC
Q ss_conf 8417898389822589999976001999989---9489999088999--888909999969992------9994216999
Q 005493 228 MFDLKSLTWLPLHCTGTGPSPRSNHVAALYD---DKNLLIFGGSSKS--KTLNDLYSLDFETMI------WTRIKIRGFH 296 (694)
Q Consensus 228 ~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~~---~~~lyi~GG~~~~--~~~~~i~~yd~~t~~------W~~l~~~g~~ 296 (694)
+||+.+++|+.+...+++|.+|++|++++++ ++ ||||||.... ..++++++||+.++. |+.+..+ +
T Consensus 517 ~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~-iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p 593 (695)
T 2zwa_A 517 LYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ-GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--P 593 (695)
T ss_dssp EEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE-EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--G
T ss_pred EEECCCCCEEECCCCCCCCCCCCCEEEEEEECCCCE-EEEECCCCCCCCEEECCEEEEECCCCCCCCCEEEEECCCC--C
T ss_conf 998899956884678999976431368999179998-9998776799980617579998358865331578776789--9
Q ss_pred CCCCCCEEEEEEC-CEEEEECCCCCCC---CCCEEEEEECCCCCEEEEECCCCC----CCCCCCCCEEEEEEECCCCEEE
Q ss_conf 9999640899989-9999992778998---768199999899918992218999----9888867199999556982999
Q 005493 297 PSPRAGCCGVLCG-TKWYIAGGGSRKK---RHAETLIFDILKGEWSVAITSPSS----SVTSNKGFTLVLVQHKEKDFLV 368 (694)
Q Consensus 297 p~~R~~~sa~~~~-~~iyIiGG~~~~~---~~~~i~~yd~~t~~W~~l~~~~~~----~p~~r~~~s~v~~~~~~~~~I~ 368 (694)
+.+|.+|++++++ ++|||+||.+... ..+++++||+.+++|+.+.. +.. .++.+.+|+++.+. ++.||
T Consensus 594 ~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~-p~~~~~~~~p~~~gh~~~~~~---~g~i~ 669 (695)
T 2zwa_A 594 LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI-SRRIWEDHSLMLAGFSLVSTS---MGTIH 669 (695)
T ss_dssp GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC-CHHHHHHSCCCCSSCEEECC------CEE
T ss_pred CCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEC-CCCCCCCCCCCCEEEEEEEEC---CCEEE
T ss_conf 98865456999689979998883677887877808999899993998634-654457878620013689948---99899
Q ss_pred EECCCCC-----CCCCCEEEEECCC
Q ss_conf 9948999-----9999289997746
Q 005493 369 AFGGIKK-----EPSNQVEVLSIEK 388 (694)
Q Consensus 369 v~GG~~~-----~~~~~i~~~d~~~ 388 (694)
++||... ...+.+|.+++..
T Consensus 670 v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 670 IIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp EECCEEECTTSCEEECCCEEEEECC
T ss_pred EEECCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9959964757556136519999973
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=1.00 E-value=1 Score=317.42 Aligned_cols=263 Identities=17% Similarity=0.228 Sum_probs=234.1
Q ss_pred CCEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEE
Q ss_conf 99999995878997767389998799948993246556999999999975314999989999999420699999517999
Q 005493 98 GNKMIVVGGESGNGLLDDVQVLNFDRFSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVLLVGGKTDSGSDRVSVWT 177 (694)
Q Consensus 98 ~~~lyi~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iyv~GG~~~~~~~~~~v~~ 177 (694)
.+.||+|||... .+++++||+.+++|..++++ +.+|.+|+++.++++||++||.. ....+++++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~-----------p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~ 74 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCP-----------FEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDC 74 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCC-----------SCCCBSCEEEEETTEEEEECCBS--SSBCCEEEE
T ss_pred CCEEEEEECCCC---CCEEEEECCCCCCEECCCCC-----------CCCCCEEEEEEECCEEEEEECCC--CCCCCEEEE
T ss_conf 344999958778---85189866988978307888-----------75456368999999999993889--987533799
Q ss_pred EECCCCCEEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEEE
Q ss_conf 99999939994214999976500299998994999824359996446268841789838982258999997600199998
Q 005493 178 FDTETECWSVVEAKGDIPVARSGHTVVRASSVLILFGGEDGKRRKLNDLHMFDLKSLTWLPLHCTGTGPSPRSNHVAALY 257 (694)
Q Consensus 178 yD~~t~~W~~l~~~g~~p~~R~~~s~~~~~~~iyv~GG~~~~~~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~~s~~~~ 257 (694)
||+.+++|+.++ ++|.+|..|+++.++++||++||.+.....++++++||+.+++|+.+. ++|.+|..|+++.+
T Consensus 75 ~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~ 148 (306)
T 3ii7_A 75 YNVVKDSWYSKL---GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEA 148 (306)
T ss_dssp EETTTTEEEEEE---CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEE
T ss_pred EECCCCEEEECC---CCCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEEEEECCCCCEEECC---CCCCCCCEEEEEEE
T ss_conf 827999297789---887643210699999999998988778847006999818999568589---97677615479998
Q ss_pred CCCEEEEECCCCCCCC----CCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCEEEEEECC
Q ss_conf 9948999908899988----890999996999299942169999999640899989999999277899876819999989
Q 005493 258 DDKNLLIFGGSSKSKT----LNDLYSLDFETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRKKRHAETLIFDIL 333 (694)
Q Consensus 258 ~~~~lyi~GG~~~~~~----~~~i~~yd~~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~~~~~~i~~yd~~ 333 (694)
+++ +|++||...... ++++++||+.+++|+.++.+ |.+|.+|+++.++++|||+||.......+++++||+.
T Consensus 149 ~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 149 NGL-IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM---IEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp TTE-EEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETT
T ss_pred CCE-EEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCCC---CCHHHCCEEEEECCEEEEEECCCCCCCCCEEEEEECC
T ss_conf 999-999878789997662113389847998927799876---3302262699999999999598889877649996279
Q ss_pred CCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC-CCCCEEEEECCCCCCCCC
Q ss_conf 9918992218999988886719999955698299999489999-999289997746876778
Q 005493 334 KGEWSVAITSPSSSVTSNKGFTLVLVQHKEKDFLVAFGGIKKE-PSNQVEVLSIEKNESSMG 394 (694)
Q Consensus 334 t~~W~~l~~~~~~~p~~r~~~s~v~~~~~~~~~I~v~GG~~~~-~~~~i~~~d~~~~~w~~~ 394 (694)
+++|+.+. ..|.+|.+|+++.+. +.||++||++.. ..+++++||+..++|...
T Consensus 225 ~~~W~~~~----~~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 225 LNEWKMVS----PMPWKGVTVKCAAVG----SIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp TTEEEECC----CCSCCBSCCEEEEET----TEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred CCCEEECC----CCCCCCCCEEEEEEC----CEEEEEECCCCCEEEEEEEEECCCCCEEEEC
T ss_conf 99687878----898776620599989----9999993767981212489975899917868
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=1.00 E-value=1 Score=316.21 Aligned_cols=281 Identities=17% Similarity=0.227 Sum_probs=229.1
Q ss_pred CCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCC--CCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEE
Q ss_conf 99998753029999999999995878997767389998799--9489932465569999999999753149999899999
Q 005493 83 GDKPIPRFNHAAAVIGNKMIVVGGESGNGLLDDVQVLNFDR--FSWTAASSKLYLSPSSLPLKIPACRGHSLISWGKKVL 160 (694)
Q Consensus 83 ~~~P~~R~~~s~~~v~~~lyi~GG~~~~~~~~~v~~yd~~t--~~W~~~~~~~~~~~~~~~~~~p~r~~~s~v~~~~~Iy 160 (694)
+++|.+|.+|++++++++|||+||... +++++||+.+ ++|+.+++ ++..+|.+|++++++++||
T Consensus 4 ~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~----------~p~~~R~~~~~~~~~~~ly 69 (357)
T 2uvk_A 4 PETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAA----------FPGGPRDQATSAFIDGNLY 69 (357)
T ss_dssp CCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCC----------CTTCCCBSCEEEEETTEEE
T ss_pred CCCCCCCCCEEEEEECCEEEEEECCCC----CEEEEECCCCCCCCEEECCC----------CCCCCCCCCEEEEECCEEE
T ss_conf 989966314178998999999937679----86999706467887259889----------9898676405999999999
Q ss_pred EECCCCC----CCCCCCEEEEEECCCCCEEEEEECCCCC-CCCEEEEEEEECCEEEEECCCCCCC---------------
Q ss_conf 9942069----9999517999999999399942149999-7650029999899499982435999---------------
Q 005493 161 LVGGKTD----SGSDRVSVWTFDTETECWSVVEAKGDIP-VARSGHTVVRASSVLILFGGEDGKR--------------- 220 (694)
Q Consensus 161 v~GG~~~----~~~~~~~v~~yD~~t~~W~~l~~~g~~p-~~R~~~s~~~~~~~iyv~GG~~~~~--------------- 220 (694)
+|||... .....+++|+||+.+++|+.+++ ++ .+|.+|++++.+++||+|||.+...
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMS---HAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSC---CCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred EECCCCCCCCCCCEEECCEEEEECCCCCEEECCC---CCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHCCCCC
T ss_conf 9838777888631251618998579994788987---9986552636899899999990867776763223210037764
Q ss_pred ------------------CCCCCEEEEECCCCCEEECCCCCCCCCCCCE-EEEEEECCCEEEEECCCCCC-CCCCEEEEE
Q ss_conf ------------------6446268841789838982258999997600-19999899489999088999-888909999
Q 005493 221 ------------------RKLNDLHMFDLKSLTWLPLHCTGTGPSPRSN-HVAALYDDKNLLIFGGSSKS-KTLNDLYSL 280 (694)
Q Consensus 221 ------------------~~~~~i~~yd~~t~~W~~l~~~g~~P~~r~~-~s~~~~~~~~lyi~GG~~~~-~~~~~i~~y 280 (694)
..++++++||+.+++|+.+. ++|.++.. |++++++++ ||||||.... ...++++.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDK-TWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTE-EEEECCEEETTEECCCEEEE
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECC---CCCCCCCCCCCEEEECCE-EEEEEEECCCCCCCCCEEEE
T ss_conf 10001112220366455677660899948999687888---888887654347998999-99990253788656853899
Q ss_pred EC--CCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCCCCC-----------------CCCCEEEEEECCCCCEEEEE
Q ss_conf 96--999299942169999999640899989999999277899-----------------87681999998999189922
Q 005493 281 DF--ETMIWTRIKIRGFHPSPRAGCCGVLCGTKWYIAGGGSRK-----------------KRHAETLIFDILKGEWSVAI 341 (694)
Q Consensus 281 d~--~t~~W~~l~~~g~~p~~R~~~sa~~~~~~iyIiGG~~~~-----------------~~~~~i~~yd~~t~~W~~l~ 341 (694)
|+ .+++|+.+..+ ..|.+|.+|+++.++++|||+||.+.. ....++++||+.+++|+.+.
T Consensus 223 d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 223 DFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp ECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EECCCCCCEEECCCC-CCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCEEECC
T ss_conf 862898827746889-9974135534799799999995802468742234443000136643115798716789502678
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCC--CCCEEEEECCCCCCCC
Q ss_conf 189999888867199999556982999994899999--9928999774687677
Q 005493 342 TSPSSSVTSNKGFTLVLVQHKEKDFLVAFGGIKKEP--SNQVEVLSIEKNESSM 393 (694)
Q Consensus 342 ~~~~~~p~~r~~~s~v~~~~~~~~~I~v~GG~~~~~--~~~i~~~d~~~~~w~~ 393 (694)
. .|.+|.+|+++.+. +.||+|||++... .++++.+++..++|..
T Consensus 302 ~----~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 302 E----LSQGRAYGVSLPWN----NSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp E----CSSCCBSSEEEEET----TEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred C----CCCCCCCCEEEEEC----CEEEEEEEECCCCCEEEEEEEEEECCCEEEE
T ss_conf 8----98772430658759----9899993057999774148999972857685
Done!