Query 005501
Match_columns 693
No_of_seqs 420 out of 3395
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 00:27:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005501.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005501hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03052 acetate--CoA ligase; 100.0 1.3E-92 2.8E-97 813.6 70.1 688 1-692 4-698 (728)
2 PRK12467 peptide synthase; Pro 100.0 1.4E-83 3.1E-88 847.5 40.3 621 15-692 1408-2062(3956)
3 PRK12467 peptide synthase; Pro 100.0 6E-83 1.3E-87 841.5 38.6 614 15-693 2932-3572(3956)
4 PRK12316 peptide synthase; Pro 100.0 1.4E-80 2.9E-85 831.7 37.2 611 14-693 2891-3522(5163)
5 PRK12316 peptide synthase; Pro 100.0 1.8E-80 3.8E-85 830.6 36.5 618 14-692 342-983 (5163)
6 PRK10252 entF enterobactin syn 100.0 1.3E-79 2.9E-84 759.6 41.3 617 14-692 297-944 (1296)
7 PRK05691 peptide synthase; Val 100.0 1E-79 2.2E-84 818.2 40.7 624 2-693 3547-4206(4334)
8 COG0365 Acs Acyl-coenzyme A sy 100.0 1.4E-77 3.1E-82 643.0 49.3 478 166-688 1-491 (528)
9 TIGR03443 alpha_am_amid L-amin 100.0 4.3E-79 9.4E-84 757.6 40.5 640 13-692 81-805 (1389)
10 PRK05691 peptide synthase; Val 100.0 1.3E-78 2.9E-83 807.5 36.0 622 14-693 2021-2675(4334)
11 PTZ00237 acetyl-CoA synthetase 100.0 1.1E-74 2.3E-79 661.5 55.2 553 118-692 7-600 (647)
12 PLN02654 acetate-CoA ligase 100.0 1.5E-73 3.3E-78 654.2 56.8 555 119-692 30-617 (666)
13 TIGR02316 propion_prpE propion 100.0 2.5E-73 5.5E-78 650.5 57.6 549 120-692 2-581 (628)
14 PRK03584 acetoacetyl-CoA synth 100.0 8.8E-73 1.9E-77 649.6 59.4 579 85-693 5-603 (655)
15 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 5.7E-73 1.2E-77 648.4 56.5 554 118-692 4-579 (625)
16 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.6E-72 3.4E-77 644.7 59.0 579 84-693 5-604 (652)
17 PRK00174 acetyl-CoA synthetase 100.0 6.6E-72 1.4E-76 640.7 57.6 552 119-693 17-588 (637)
18 PRK10524 prpE propionyl-CoA sy 100.0 2.2E-71 4.7E-76 635.8 56.1 549 119-692 2-582 (629)
19 KOG1176 Acyl-CoA synthetase [L 100.0 2E-70 4.3E-75 591.3 46.1 472 188-692 28-509 (537)
20 KOG1175 Acyl-CoA synthetase [L 100.0 2.4E-69 5.1E-74 579.3 49.0 560 114-692 6-575 (626)
21 KOG1177 Long chain fatty acid 100.0 1.6E-67 3.5E-72 527.9 35.2 481 186-692 60-564 (596)
22 COG0318 CaiC Acyl-CoA syntheta 100.0 3.3E-66 7.1E-71 578.4 47.5 468 186-692 21-504 (534)
23 PRK07788 acyl-CoA synthetase; 100.0 3.3E-66 7.1E-71 584.2 46.7 462 185-692 58-528 (549)
24 PRK04319 acetyl-CoA synthetase 100.0 2.9E-64 6.2E-69 570.5 50.4 486 166-692 35-536 (570)
25 PRK06060 acyl-CoA synthetase; 100.0 1.4E-64 3.1E-69 586.0 46.5 441 188-692 18-469 (705)
26 PRK07529 AMP-binding domain pr 100.0 5.2E-64 1.1E-68 573.4 50.2 487 186-692 35-547 (632)
27 PRK06334 long chain fatty acid 100.0 1.2E-64 2.5E-69 568.6 43.8 463 185-692 28-512 (539)
28 PLN02860 o-succinylbenzoate-Co 100.0 4.5E-64 9.8E-69 567.8 45.8 466 185-691 16-529 (563)
29 PLN03051 acyl-activating enzym 100.0 2.2E-63 4.9E-68 553.5 48.1 451 240-691 1-467 (499)
30 PRK13382 acyl-CoA synthetase; 100.0 3.2E-63 6.9E-68 557.6 46.8 460 185-692 52-517 (537)
31 PRK13295 cyclohexanecarboxylat 100.0 2.9E-62 6.3E-67 551.5 49.5 473 187-692 35-521 (547)
32 PLN02574 4-coumarate--CoA liga 100.0 1.7E-62 3.7E-67 554.5 47.2 466 187-692 50-531 (560)
33 PLN02246 4-coumarate--CoA liga 100.0 4.3E-62 9.2E-67 549.2 47.7 464 187-692 34-513 (537)
34 PLN02614 long-chain acyl-CoA s 100.0 6E-63 1.3E-67 565.6 41.1 444 185-664 54-567 (666)
35 PRK05677 long-chain-fatty-acid 100.0 6.1E-62 1.3E-66 550.5 48.5 471 186-692 34-534 (562)
36 PLN02736 long-chain acyl-CoA s 100.0 4.9E-63 1.1E-67 567.6 39.1 448 186-664 54-558 (651)
37 PRK08314 long-chain-fatty-acid 100.0 7.9E-62 1.7E-66 548.6 47.4 472 186-693 20-520 (546)
38 PRK07656 long-chain-fatty-acid 100.0 2.3E-61 5.1E-66 540.7 48.1 468 186-692 15-493 (513)
39 TIGR03098 ligase_PEP_1 acyl-Co 100.0 5.7E-61 1.2E-65 537.9 49.3 472 187-692 11-495 (515)
40 PRK06839 acyl-CoA synthetase; 100.0 6.8E-61 1.5E-65 534.7 46.7 453 185-693 11-473 (496)
41 PRK07769 long-chain-fatty-acid 100.0 2.2E-61 4.8E-66 553.0 43.6 467 186-691 31-588 (631)
42 PRK07638 acyl-CoA synthetase; 100.0 5.1E-61 1.1E-65 534.1 44.9 444 185-692 10-458 (487)
43 PRK09274 peptide synthase; Pro 100.0 3.5E-61 7.6E-66 543.8 44.2 464 186-687 16-515 (552)
44 COG1021 EntE Peptide arylation 100.0 3.8E-62 8.1E-67 478.4 30.9 469 185-693 37-516 (542)
45 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.2E-60 4.9E-65 535.3 50.0 474 186-692 32-519 (538)
46 PRK08315 AMP-binding domain pr 100.0 1.1E-60 2.4E-65 540.8 47.7 479 185-693 25-529 (559)
47 PLN02861 long-chain-fatty-acid 100.0 2.1E-61 4.6E-66 553.2 40.2 444 186-663 53-563 (660)
48 PLN02330 4-coumarate--CoA liga 100.0 2.4E-60 5.2E-65 535.9 47.7 465 186-692 38-518 (546)
49 COG1020 EntF Non-ribosomal pep 100.0 1.6E-62 3.5E-67 564.4 30.5 550 14-636 68-642 (642)
50 PRK08279 long-chain-acyl-CoA s 100.0 1.7E-60 3.7E-65 543.0 45.5 475 186-693 47-542 (600)
51 PRK05605 long-chain-fatty-acid 100.0 3.5E-60 7.6E-65 537.9 47.0 474 186-693 42-547 (573)
52 PRK12583 acyl-CoA synthetase; 100.0 6.9E-60 1.5E-64 534.3 49.0 479 186-692 28-529 (558)
53 PRK06145 acyl-CoA synthetase; 100.0 6.3E-60 1.4E-64 526.9 47.9 455 186-692 12-474 (497)
54 PRK05852 acyl-CoA synthetase; 100.0 4.5E-60 9.7E-65 532.4 46.3 486 165-692 7-509 (534)
55 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.4E-60 1.4E-64 530.2 47.1 466 186-692 33-509 (527)
56 PRK07868 acyl-CoA synthetase; 100.0 1.1E-60 2.3E-65 566.9 42.9 462 184-693 455-936 (994)
57 PRK12476 putative fatty-acid-- 100.0 1.6E-60 3.6E-65 543.5 42.4 465 186-691 44-580 (612)
58 PRK06155 crotonobetaine/carnit 100.0 7.2E-60 1.6E-64 530.8 46.9 461 185-692 30-501 (542)
59 PRK05851 long-chain-fatty-acid 100.0 1E-60 2.2E-65 535.9 39.8 446 186-692 12-497 (525)
60 PRK06187 long-chain-fatty-acid 100.0 9.6E-60 2.1E-64 528.7 47.0 467 185-692 15-496 (521)
61 PRK07008 long-chain-fatty-acid 100.0 1.1E-59 2.4E-64 529.3 47.5 470 187-692 21-510 (539)
62 PRK07470 acyl-CoA synthetase; 100.0 7E-60 1.5E-64 530.4 45.7 461 186-692 17-495 (528)
63 PRK08008 caiC putative crotono 100.0 1.7E-59 3.7E-64 526.0 47.6 470 186-692 17-499 (517)
64 PTZ00342 acyl-CoA synthetase; 100.0 3.1E-60 6.6E-65 541.8 42.1 443 185-664 70-641 (746)
65 PRK07514 malonyl-CoA synthase; 100.0 2.6E-59 5.7E-64 522.9 48.0 456 188-692 14-478 (504)
66 PRK03640 O-succinylbenzoic aci 100.0 8.9E-60 1.9E-64 523.8 43.9 442 185-692 11-459 (483)
67 PRK08316 acyl-CoA synthetase; 100.0 1.5E-59 3.3E-64 527.3 46.2 468 186-692 21-496 (523)
68 PLN03102 acyl-activating enzym 100.0 1.7E-59 3.7E-64 531.3 46.5 470 186-693 24-532 (579)
69 PRK09088 acyl-CoA synthetase; 100.0 2.7E-59 5.9E-64 520.4 47.2 448 185-692 4-462 (488)
70 PRK08043 bifunctional acyl-[ac 100.0 4.5E-60 9.9E-65 548.7 42.1 465 185-692 213-690 (718)
71 PRK12492 long-chain-fatty-acid 100.0 3.5E-59 7.6E-64 528.0 48.1 472 185-692 33-541 (562)
72 PRK05857 acyl-CoA synthetase; 100.0 1.3E-59 2.9E-64 528.6 44.4 461 185-692 23-508 (540)
73 PRK10946 entE enterobactin syn 100.0 5.7E-59 1.2E-63 523.2 47.8 460 190-692 37-509 (536)
74 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.4E-59 9.5E-64 520.8 45.9 454 186-693 10-480 (502)
75 PRK07786 long-chain-fatty-acid 100.0 3.6E-59 7.7E-64 525.8 45.0 474 172-692 16-501 (542)
76 PRK13390 acyl-CoA synthetase; 100.0 5.8E-59 1.3E-63 519.5 46.2 461 185-692 6-483 (501)
77 PRK05620 long-chain-fatty-acid 100.0 1.1E-58 2.3E-63 525.6 47.2 479 186-692 20-534 (576)
78 PRK07787 acyl-CoA synthetase; 100.0 9.7E-59 2.1E-63 513.3 44.6 433 186-692 10-450 (471)
79 PRK06087 short chain acyl-CoA 100.0 1.9E-58 4.1E-63 520.9 46.8 469 186-692 33-513 (547)
80 PRK07798 acyl-CoA synthetase; 100.0 4E-58 8.7E-63 517.1 48.6 471 185-692 12-509 (533)
81 PRK07059 Long-chain-fatty-acid 100.0 2.9E-58 6.3E-63 520.4 47.4 471 186-692 33-535 (557)
82 PRK13388 acyl-CoA synthetase; 100.0 3.5E-58 7.6E-63 516.8 47.4 448 188-692 13-483 (540)
83 PRK06018 putative acyl-CoA syn 100.0 4.5E-58 9.7E-63 516.9 48.0 472 186-692 20-511 (542)
84 TIGR03205 pimA dicarboxylate-- 100.0 4.1E-58 9E-63 517.3 47.7 471 186-692 31-523 (541)
85 PRK06164 acyl-CoA synthetase; 100.0 2.8E-58 6.1E-63 518.8 46.1 470 186-692 20-506 (540)
86 PTZ00216 acyl-CoA synthetase; 100.0 3.4E-59 7.3E-64 538.6 39.4 445 185-663 78-608 (700)
87 PRK13383 acyl-CoA synthetase; 100.0 2.7E-58 5.9E-63 515.7 45.4 444 185-692 44-497 (516)
88 PRK08751 putative long-chain f 100.0 3.3E-58 7.1E-63 520.5 46.3 471 186-692 35-537 (560)
89 PRK08180 feruloyl-CoA synthase 100.0 5.2E-59 1.1E-63 531.1 39.9 463 186-692 49-567 (614)
90 PRK07867 acyl-CoA synthetase; 100.0 5.3E-58 1.2E-62 513.8 47.2 447 189-692 16-484 (529)
91 PLN02387 long-chain-fatty-acid 100.0 5.7E-59 1.2E-63 535.3 40.2 453 185-664 67-606 (696)
92 TIGR02262 benz_CoA_lig benzoat 100.0 8.3E-58 1.8E-62 511.1 48.0 473 173-692 3-488 (508)
93 PRK08633 2-acyl-glycerophospho 100.0 8.2E-59 1.8E-63 568.7 42.8 476 185-692 624-1120(1146)
94 PRK06188 acyl-CoA synthetase; 100.0 8.3E-58 1.8E-62 513.1 47.1 460 186-692 22-494 (524)
95 PRK06710 long-chain-fatty-acid 100.0 1.1E-57 2.4E-62 516.3 45.2 469 186-692 34-532 (563)
96 PRK04813 D-alanine--poly(phosp 100.0 1.5E-57 3.4E-62 508.6 45.1 452 187-692 13-480 (503)
97 PRK06178 acyl-CoA synthetase; 100.0 5.6E-57 1.2E-61 511.0 46.7 485 167-688 27-539 (567)
98 PRK07445 O-succinylbenzoic aci 100.0 2.4E-57 5.2E-62 497.2 41.4 398 209-692 19-424 (452)
99 PRK08974 long-chain-fatty-acid 100.0 1.4E-56 3E-61 507.0 48.2 470 186-692 33-532 (560)
100 COG1022 FAA1 Long-chain acyl-C 100.0 8.5E-58 1.8E-62 496.7 36.4 428 185-664 25-519 (613)
101 PLN02430 long-chain-fatty-acid 100.0 2E-57 4.4E-62 519.4 41.1 447 186-664 52-564 (660)
102 PRK12406 long-chain-fatty-acid 100.0 3.5E-56 7.7E-61 498.0 49.8 456 193-692 3-480 (509)
103 PLN02479 acetate-CoA ligase 100.0 1.3E-56 2.9E-61 507.3 46.4 469 186-691 30-535 (567)
104 PRK08162 acyl-CoA synthetase; 100.0 3E-56 6.4E-61 502.9 48.7 469 186-691 28-516 (545)
105 PRK13391 acyl-CoA synthetase; 100.0 3.9E-56 8.6E-61 497.8 47.1 464 185-692 6-486 (511)
106 PRK08308 acyl-CoA synthetase; 100.0 4.1E-56 9E-61 483.8 43.6 388 194-692 1-390 (414)
107 PRK09029 O-succinylbenzoic aci 100.0 3.1E-56 6.6E-61 491.7 42.7 412 186-692 13-430 (458)
108 PRK12582 acyl-CoA synthetase; 100.0 1.1E-56 2.3E-61 513.0 38.3 457 186-685 59-563 (624)
109 PRK08276 long-chain-fatty-acid 100.0 1.4E-55 3E-60 492.5 44.4 444 209-692 11-473 (502)
110 PRK06814 acylglycerophosphoeth 100.0 2E-55 4.4E-60 536.8 45.1 458 187-692 642-1109(1140)
111 PRK09192 acyl-CoA synthetase; 100.0 8.6E-55 1.9E-59 493.8 43.2 439 207-692 47-541 (579)
112 TIGR01923 menE O-succinylbenzo 100.0 4.2E-54 9.2E-59 471.9 42.4 412 211-692 1-419 (436)
113 PRK05850 acyl-CoA synthetase; 100.0 1.3E-53 2.8E-58 484.6 42.8 454 186-683 11-532 (578)
114 KOG1256 Long-chain acyl-CoA sy 100.0 1.3E-53 2.8E-58 456.0 36.6 446 186-665 85-599 (691)
115 PF00501 AMP-binding: AMP-bind 100.0 6.3E-54 1.4E-58 467.7 27.6 390 185-618 4-417 (417)
116 PRK07768 long-chain-fatty-acid 100.0 5.9E-52 1.3E-56 467.8 43.3 450 186-690 12-518 (545)
117 TIGR01733 AA-adenyl-dom amino 100.0 2.9E-52 6.4E-57 453.1 38.7 393 211-643 1-408 (408)
118 KOG1179 Very long-chain acyl-C 100.0 4.6E-51 1E-55 418.3 34.6 474 184-690 85-588 (649)
119 KOG1180 Acyl-CoA synthetase [L 100.0 3.1E-50 6.6E-55 410.3 29.6 434 206-665 86-587 (678)
120 PTZ00297 pantothenate kinase; 100.0 1.8E-41 4E-46 401.7 37.2 414 186-664 437-906 (1452)
121 PRK07824 O-succinylbenzoic aci 100.0 1.6E-41 3.4E-46 362.0 31.1 294 353-692 32-334 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3E-38 6.6E-43 335.4 26.5 274 356-692 95-373 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 2.7E-33 5.8E-38 304.9 29.1 303 354-687 73-396 (422)
124 KOG1178 Non-ribosomal peptide 100.0 3.1E-34 6.6E-39 323.1 21.2 473 187-693 47-557 (1032)
125 TIGR03335 F390_ftsA coenzyme F 100.0 2.3E-27 5.1E-32 258.4 28.5 298 353-680 83-400 (445)
126 KOG3628 Predicted AMP-binding 99.9 6.9E-24 1.5E-28 231.7 33.0 455 185-664 779-1298(1363)
127 TIGR03089 conserved hypothetic 99.9 4.5E-24 9.8E-29 210.1 23.5 216 186-447 6-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 4.3E-21 9.3E-26 198.6 26.7 282 352-665 86-385 (438)
129 TIGR02304 aden_form_hyp probab 99.7 1E-14 2.2E-19 155.6 24.3 258 358-663 101-378 (430)
130 PRK09188 serine/threonine prot 99.7 5.1E-16 1.1E-20 161.7 12.0 93 589-692 209-305 (365)
131 KOG3628 Predicted AMP-binding 99.3 1E-10 2.2E-15 129.8 21.8 433 187-665 105-649 (1363)
132 PF13745 HxxPF_rpt: HxxPF-repe 99.2 3.9E-13 8.4E-18 112.5 -4.9 84 41-132 1-91 (91)
133 PF04443 LuxE: Acyl-protein sy 98.9 3.4E-08 7.3E-13 103.4 17.9 235 354-621 87-357 (365)
134 PF13193 AMP-binding_C: AMP-bi 98.8 4E-09 8.6E-14 83.8 5.4 58 626-691 1-60 (73)
135 PF03321 GH3: GH3 auxin-respon 98.4 4.3E-06 9.2E-11 92.8 15.4 74 591-665 371-452 (528)
136 PLN02249 indole-3-acetic acid- 97.8 0.0021 4.6E-08 71.8 20.4 42 591-632 410-455 (597)
137 PLN02620 indole-3-acetic acid- 97.5 0.008 1.7E-07 66.6 20.0 42 591-632 423-468 (612)
138 PLN02247 indole-3-acetic acid- 97.5 0.028 6E-07 62.6 23.3 42 591-632 417-462 (606)
139 PF14535 AMP-binding_C_2: AMP- 94.9 0.11 2.4E-06 43.4 7.1 65 619-686 1-69 (96)
140 COG1541 PaaK Coenzyme F390 syn 90.2 1.2 2.6E-05 47.6 8.5 81 209-290 109-192 (438)
141 PLN02736 long-chain acyl-CoA s 71.2 53 0.0011 38.0 13.2 101 374-479 77-180 (651)
142 TIGR03335 F390_ftsA coenzyme F 70.6 24 0.00052 38.6 9.8 94 191-288 86-184 (445)
143 TIGR03089 conserved hypothetic 69.6 22 0.00048 34.9 8.3 76 189-281 148-226 (227)
144 PF00501 AMP-binding: AMP-bind 68.5 28 0.0006 37.4 9.7 89 354-451 8-99 (417)
145 TIGR02155 PA_CoA_ligase phenyl 67.6 28 0.00061 37.7 9.5 97 191-289 75-176 (422)
146 PRK13295 cyclohexanecarboxylat 60.7 50 0.0011 37.1 10.2 97 354-454 37-136 (547)
147 PRK06187 long-chain-fatty-acid 59.6 92 0.002 34.4 12.1 85 376-461 32-119 (521)
148 PRK09274 peptide synthase; Pro 58.7 51 0.0011 37.1 9.8 99 354-453 19-121 (552)
149 PLN03052 acetate--CoA ligase; 58.4 74 0.0016 37.4 11.2 99 354-454 188-289 (728)
150 PRK07656 long-chain-fatty-acid 57.8 89 0.0019 34.6 11.5 85 375-460 30-117 (513)
151 PLN02387 long-chain-fatty-acid 56.6 66 0.0014 37.6 10.4 102 374-480 105-209 (696)
152 PRK06839 acyl-CoA synthetase; 55.5 94 0.002 34.2 11.2 96 354-459 15-114 (496)
153 PTZ00342 acyl-CoA synthetase; 54.4 1.3E+02 0.0028 35.5 12.3 118 354-480 74-208 (746)
154 PRK04319 acetyl-CoA synthetase 54.2 1.1E+02 0.0023 34.7 11.5 85 374-459 72-159 (570)
155 KOG1177 Long chain fatty acid 54.2 62 0.0013 35.1 8.4 109 372-481 74-199 (596)
156 PTZ00237 acetyl-CoA synthetase 53.6 1E+02 0.0022 35.7 11.3 95 355-453 75-172 (647)
157 PRK10524 prpE propionyl-CoA sy 53.5 96 0.0021 35.6 11.1 96 354-453 66-164 (629)
158 TIGR02188 Ac_CoA_lig_AcsA acet 53.4 90 0.002 35.8 10.8 97 354-454 70-169 (625)
159 PLN02246 4-coumarate--CoA liga 53.3 80 0.0017 35.3 10.2 97 354-458 36-135 (537)
160 PRK00174 acetyl-CoA synthetase 53.2 88 0.0019 36.0 10.7 97 354-454 80-179 (637)
161 PRK08316 acyl-CoA synthetase; 52.6 93 0.002 34.5 10.6 86 374-460 35-123 (523)
162 PRK13388 acyl-CoA synthetase; 52.3 1.2E+02 0.0025 34.1 11.3 84 375-459 26-113 (540)
163 PRK08008 caiC putative crotono 52.2 95 0.0021 34.5 10.6 101 354-459 20-123 (517)
164 PLN02654 acetate-CoA ligase 52.1 1.1E+02 0.0023 35.6 11.2 96 355-454 103-201 (666)
165 PRK03584 acetoacetyl-CoA synth 51.9 1.1E+02 0.0023 35.4 11.2 95 355-454 98-195 (655)
166 PRK06334 long chain fatty acid 51.3 92 0.002 35.0 10.3 83 376-459 46-128 (539)
167 PRK08315 AMP-binding domain pr 51.3 86 0.0019 35.2 10.1 80 374-454 42-124 (559)
168 KOG1176 Acyl-CoA synthetase [L 51.2 68 0.0015 36.0 8.8 88 373-461 43-135 (537)
169 TIGR02316 propion_prpE propion 51.1 1.1E+02 0.0023 35.2 11.0 96 354-453 65-163 (628)
170 PRK07514 malonyl-CoA synthase; 51.1 1E+02 0.0022 34.0 10.6 86 373-459 26-114 (504)
171 PRK07798 acyl-CoA synthetase; 49.8 1.2E+02 0.0026 33.7 10.9 85 374-459 27-114 (533)
172 PF09580 Spore_YhcN_YlaJ: Spor 49.8 61 0.0013 30.3 7.2 54 625-686 78-131 (177)
173 PRK05857 acyl-CoA synthetase; 49.8 83 0.0018 35.3 9.6 94 354-455 27-123 (540)
174 PRK08279 long-chain-acyl-CoA s 49.5 1.1E+02 0.0024 34.8 10.7 96 354-459 50-148 (600)
175 PRK06155 crotonobetaine/carnit 48.5 91 0.002 35.0 9.7 85 375-460 46-133 (542)
176 TIGR01217 ac_ac_CoA_syn acetoa 46.8 1.4E+02 0.003 34.6 11.0 93 356-453 99-194 (652)
177 KOG0633 Histidinol phosphate a 46.6 36 0.00077 33.5 4.9 68 222-289 98-169 (375)
178 PRK09088 acyl-CoA synthetase; 45.8 1.4E+02 0.0031 32.7 10.6 92 354-453 8-102 (488)
179 PRK12583 acyl-CoA synthetase; 45.6 1.3E+02 0.0029 33.7 10.5 93 354-454 31-126 (558)
180 PRK08751 putative long-chain f 45.6 1.2E+02 0.0026 34.1 10.2 95 354-458 38-136 (560)
181 PLN02574 4-coumarate--CoA liga 45.5 1.4E+02 0.0029 33.8 10.5 99 354-460 52-154 (560)
182 PRK08276 long-chain-fatty-acid 44.9 1E+02 0.0022 34.0 9.3 83 376-459 12-97 (502)
183 PRK03640 O-succinylbenzoic aci 44.8 1.8E+02 0.0039 31.8 11.3 94 354-457 15-111 (483)
184 PRK07788 acyl-CoA synthetase; 44.7 93 0.002 34.9 9.0 84 375-459 74-160 (549)
185 PRK08314 long-chain-fatty-acid 44.6 1.4E+02 0.003 33.5 10.4 85 375-460 35-123 (546)
186 TIGR02898 spore_YhcN_YlaJ spor 44.5 80 0.0017 28.9 6.6 53 625-683 57-109 (158)
187 TIGR01733 AA-adenyl-dom amino 44.4 87 0.0019 33.3 8.4 67 392-459 20-86 (408)
188 PRK13383 acyl-CoA synthetase; 44.3 88 0.0019 34.8 8.7 84 375-459 60-146 (516)
189 PRK07059 Long-chain-fatty-acid 44.3 1.3E+02 0.0028 33.8 10.2 84 374-458 47-133 (557)
190 TIGR03443 alpha_am_amid L-amin 44.1 98 0.0021 39.5 10.0 98 354-452 249-349 (1389)
191 TIGR03098 ligase_PEP_1 acyl-Co 43.8 1.3E+02 0.0028 33.3 9.9 85 375-460 25-112 (515)
192 PRK07529 AMP-binding domain pr 42.6 1.5E+02 0.0033 34.1 10.4 96 354-452 38-136 (632)
193 PRK05605 long-chain-fatty-acid 42.4 1.1E+02 0.0024 34.6 9.1 84 375-459 57-143 (573)
194 PLN02614 long-chain acyl-CoA s 42.3 1.7E+02 0.0037 33.9 10.8 86 375-461 79-167 (666)
195 PRK13391 acyl-CoA synthetase; 41.4 1.8E+02 0.0038 32.3 10.5 97 354-458 10-109 (511)
196 PLN02430 long-chain-fatty-acid 40.9 1.7E+02 0.0037 33.9 10.5 119 355-479 56-179 (660)
197 PRK13382 acyl-CoA synthetase; 40.9 1.3E+02 0.0028 33.7 9.4 82 375-457 68-152 (537)
198 PRK06164 acyl-CoA synthetase; 40.4 1.1E+02 0.0024 34.2 8.7 91 354-454 23-116 (540)
199 PLN02330 4-coumarate--CoA liga 39.9 1.3E+02 0.0028 33.7 9.2 96 354-457 41-139 (546)
200 TIGR03208 cyc_hxne_CoA_lg cycl 39.6 1.6E+02 0.0035 32.9 9.9 97 354-454 35-134 (538)
201 PRK12492 long-chain-fatty-acid 39.6 1.3E+02 0.0027 34.0 9.1 81 374-455 48-132 (562)
202 PLN03102 acyl-activating enzym 39.3 1.1E+02 0.0023 34.8 8.5 82 375-457 39-123 (579)
203 PRK05677 long-chain-fatty-acid 39.2 1.6E+02 0.0035 33.1 9.9 83 374-457 48-134 (562)
204 PRK13390 acyl-CoA synthetase; 38.5 2E+02 0.0042 31.8 10.3 93 354-454 10-105 (501)
205 PLN02861 long-chain-fatty-acid 36.8 1.5E+02 0.0033 34.3 9.3 86 374-460 76-164 (660)
206 PRK06087 short chain acyl-CoA 36.4 1.6E+02 0.0035 32.9 9.3 90 354-452 36-128 (547)
207 TIGR01923 menE O-succinylbenzo 35.2 1.4E+02 0.003 32.1 8.3 68 386-454 13-80 (436)
208 PLN02479 acetate-CoA ligase 34.6 1.8E+02 0.0039 32.9 9.3 81 375-456 45-128 (567)
209 cd06451 AGAT_like Alanine-glyo 34.3 4.6E+02 0.01 27.3 11.8 76 212-287 27-104 (356)
210 PRK07008 long-chain-fatty-acid 33.7 2.3E+02 0.0051 31.6 10.0 98 189-289 174-276 (539)
211 PRK08162 acyl-CoA synthetase; 33.5 1.5E+02 0.0033 33.1 8.5 84 375-459 43-129 (545)
212 PRK12406 long-chain-fatty-acid 33.1 1.5E+02 0.0032 32.9 8.2 83 376-459 12-97 (509)
213 PRK05620 long-chain-fatty-acid 33.0 2.9E+02 0.0063 31.2 10.7 86 373-459 36-125 (576)
214 COG4009 Uncharacterized protei 32.5 2.3E+02 0.0049 22.4 6.3 64 209-283 9-76 (88)
215 PRK05850 acyl-CoA synthetase; 32.2 4.4E+02 0.0095 29.7 12.0 102 354-459 14-123 (578)
216 COG0318 CaiC Acyl-CoA syntheta 31.9 3.8E+02 0.0082 30.0 11.2 93 354-454 24-119 (534)
217 PRK07470 acyl-CoA synthetase; 31.8 2E+02 0.0042 32.1 9.0 81 375-456 32-115 (528)
218 PRK09162 hypoxanthine-guanine 31.7 1.2E+02 0.0025 28.6 5.9 46 209-254 16-61 (181)
219 PRK06178 acyl-CoA synthetase; 31.6 2.2E+02 0.0049 32.0 9.5 85 375-460 58-145 (567)
220 PRK12476 putative fatty-acid-- 30.6 4.6E+02 0.0099 29.9 11.8 101 354-458 47-155 (612)
221 PRK13237 tyrosine phenol-lyase 30.5 2.2E+02 0.0049 31.1 8.5 67 209-280 77-174 (460)
222 TIGR02262 benz_CoA_lig benzoat 29.8 2.4E+02 0.0052 31.2 9.1 84 375-459 30-116 (508)
223 PRK10696 tRNA 2-thiocytidine b 29.5 4.9E+02 0.011 25.9 10.4 70 219-288 13-95 (258)
224 COG0031 CysK Cysteine synthase 29.2 3.3E+02 0.0071 27.9 8.8 58 230-288 59-116 (300)
225 PRK06018 putative acyl-CoA syn 29.2 1.6E+02 0.0035 33.0 7.7 84 374-458 38-124 (542)
226 PLN02860 o-succinylbenzoate-Co 28.7 1.6E+02 0.0036 33.1 7.7 79 375-454 32-113 (563)
227 PLN03051 acyl-activating enzym 26.1 4.7E+02 0.01 28.8 10.7 97 189-289 117-217 (499)
228 PTZ00216 acyl-CoA synthetase; 26.1 2.6E+02 0.0057 32.6 8.9 88 372-460 118-208 (700)
229 KOG1178 Non-ribosomal peptide 26.0 3.4 7.5E-05 49.1 -6.5 135 211-382 130-266 (1032)
230 PRK07867 acyl-CoA synthetase; 25.8 3E+02 0.0066 30.7 9.1 83 375-458 28-114 (529)
231 COG0399 WecE Predicted pyridox 25.3 1.8E+02 0.0039 30.9 6.4 64 220-287 60-129 (374)
232 PRK07786 long-chain-fatty-acid 25.2 3E+02 0.0065 30.7 9.0 82 375-457 42-126 (542)
233 PRK06188 acyl-CoA synthetase; 25.0 2.5E+02 0.0053 31.2 8.2 80 374-454 36-118 (524)
234 PRK08974 long-chain-fatty-acid 24.9 2.9E+02 0.0063 31.0 8.8 80 375-455 48-131 (560)
235 PHA02553 6 baseplate wedge sub 24.8 2.1E+02 0.0045 32.5 7.1 74 613-687 306-380 (611)
236 PRK02261 methylaspartate mutas 24.6 5E+02 0.011 23.1 9.0 46 407-452 15-61 (137)
237 PRK05852 acyl-CoA synthetase; 24.5 2.6E+02 0.0057 31.1 8.3 76 375-451 43-121 (534)
238 PF01041 DegT_DnrJ_EryC1: DegT 24.5 1.6E+02 0.0034 31.2 6.1 63 221-287 52-120 (363)
239 PRK08308 acyl-CoA synthetase; 23.5 8.3E+02 0.018 25.9 11.7 97 189-289 99-199 (414)
240 PRK04813 D-alanine--poly(phosp 23.4 2.4E+02 0.0053 30.9 7.7 78 375-453 27-107 (503)
241 TIGR01720 NRPS-para261 non-rib 23.1 14 0.00031 32.5 -2.0 35 105-144 89-124 (153)
242 cd02070 corrinoid_protein_B12- 22.9 6.6E+02 0.014 23.9 10.9 109 379-491 64-183 (201)
243 PRK06060 acyl-CoA synthetase; 22.6 3E+02 0.0066 32.1 8.6 81 375-456 30-113 (705)
244 TIGR02379 ECA_wecE TDP-4-keto- 22.3 2.4E+02 0.0051 30.1 6.9 62 222-287 59-126 (376)
245 PRK06710 long-chain-fatty-acid 22.0 2.5E+02 0.0055 31.5 7.6 81 375-456 49-132 (563)
246 PF01037 AsnC_trans_reg: AsnC 22.0 2.9E+02 0.0064 20.8 5.8 50 622-683 10-59 (74)
247 PF04784 DUF547: Protein of un 21.6 2.1E+02 0.0046 24.6 5.3 22 613-634 50-71 (117)
248 PRK08043 bifunctional acyl-[ac 21.5 9E+02 0.019 28.2 12.2 97 188-288 362-463 (718)
249 PRK12582 acyl-CoA synthetase; 21.5 3.1E+02 0.0067 31.4 8.2 95 354-452 62-164 (624)
250 COG0365 Acs Acyl-coenzyme A sy 21.3 4.9E+02 0.011 29.2 9.2 95 359-458 27-125 (528)
251 PRK11706 TDP-4-oxo-6-deoxy-D-g 21.0 2.7E+02 0.0058 29.6 7.1 59 225-287 62-126 (375)
252 PF00818 Ice_nucleation: Ice n 20.9 44 0.00095 17.6 0.5 9 503-511 1-9 (16)
253 TIGR03205 pimA dicarboxylate-- 20.9 3.3E+02 0.0071 30.4 8.1 78 375-453 46-126 (541)
254 PRK07638 acyl-CoA synthetase; 20.7 7.9E+02 0.017 26.7 11.1 94 191-289 143-240 (487)
255 PF00455 DeoRC: DeoR C termina 20.6 2.7E+02 0.0059 25.4 6.1 84 418-509 15-106 (161)
256 PRK08633 2-acyl-glycerophospho 20.5 4.8E+02 0.01 32.4 10.2 99 353-460 627-727 (1146)
257 PRK15423 hypoxanthine phosphor 20.5 2.3E+02 0.0049 26.6 5.5 43 209-251 8-52 (178)
No 1
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-92 Score=813.63 Aligned_cols=688 Identities=61% Similarity=1.049 Sum_probs=578.5
Q ss_pred CCCcccccChhHHHHcCCCchhhHHHHHHHHHHHhhccCCChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCC
Q 005501 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK 80 (693)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~ 80 (693)
|||++.++.++||.++|+..++++.|.+.|+++...+.. +-..++-.. ..+.|+|..+.++|++.++.+.-++.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (728)
T PLN03052 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGA-SPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL 81 (728)
T ss_pred ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcC-CchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence 799999999999999999999999999999999977763 567777777 889999999999999988899888877766
Q ss_pred CCCccccCCcccccccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCC
Q 005501 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK 160 (693)
Q Consensus 81 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 160 (693)
+++..|.|.++...+++|..+++..+.......|...+.+|+.|++++++++..||..+++.+.+.+.+++.++++....
T Consensus 82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~ 161 (728)
T PLN03052 82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE 161 (728)
T ss_pred CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence 67788999998888899999988865443334377777899999999999999999999999988999999999875333
Q ss_pred CCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 005501 161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (693)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (693)
..+..+||.++.+|+++++++++. +++|+++|+++.+++.+++..+++||+||.++++++|++|++. +++||+|+++
T Consensus 162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~ 239 (728)
T PLN03052 162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239 (728)
T ss_pred CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 445679999999999999998754 4689999999987532233567899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCC
Q 005501 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (693)
Q Consensus 240 ~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (693)
++|++++++++|||+++|++++|++|.++.+++.+++++++|+++|+++.+.++++.++....+.+.....++++.....
T Consensus 240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~ 319 (728)
T PLN03052 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK 319 (728)
T ss_pred eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999998877777777777766655556666654321
Q ss_pred CCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCE
Q 005501 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (693)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (693)
........+..+|+++..................++++++||+|||||||+||||+++|+++++.+......++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~ 399 (728)
T PLN03052 320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399 (728)
T ss_pred ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence 11111122356788876543210001112222335689999999999999999999999998877766666788999999
Q ss_pred EEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEee
Q 005501 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (693)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~g 479 (693)
++++++++|+++.+.++.+|+.|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus 400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 99999999999998899999999999999977777889999999999999999999999988754456788999999999
Q ss_pred cCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe
Q 005501 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (693)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~ 559 (693)
||+++++...|+...++..+++|.||+||++++++...+..+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~ 559 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF 559 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence 99999999888887665567999999999987665554444556678999999999999999999999987557999998
Q ss_pred cccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccc
Q 005501 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (693)
Q Consensus 560 ~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~ 639 (693)
+.+++...+|++.+.+..||..+|..+|++||+|||++++++||+++|+||+||+||++|+||++.|||++|+..||+|.
T Consensus 560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~ 639 (728)
T PLN03052 560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVL 639 (728)
T ss_pred CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcc
Confidence 88887777777887788899888888888999999999999999999999999999999999999999999854799999
Q ss_pred eeEEEeecCCCCCceEEEEEEEec--CCCCCChHHHHHHHHHHHHh----hcCCCceec
Q 005501 640 ETAAISVSPAGGGPEVLVIFVVLK--KGFTSQPDKLKMIFSKAIQS----KLNPLFKVW 692 (693)
Q Consensus 640 ~a~Vv~~~~~~~g~~~l~a~vv~~--~~~~~~~~~l~~~l~~~L~~----~m~P~~~v~ 692 (693)
||+|++++++..|++.+++|||++ ++...+.++|+++++++|+. +++|..++.
T Consensus 640 eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~ 698 (728)
T PLN03052 640 ETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVI 698 (728)
T ss_pred eEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEE
Confidence 999999998766558999999998 56556767888876655554 566665554
No 2
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-83 Score=847.46 Aligned_cols=621 Identities=19% Similarity=0.192 Sum_probs=508.2
Q ss_pred HcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCC-----Ccc--c
Q 005501 15 KVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PLY--W 86 (693)
Q Consensus 15 ~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~-----~~~--~ 86 (693)
++++++++..+|.++|+++++...++ +||++||++ |++.|++.|+.+ +.||||+||++|+..... ... .
T Consensus 1408 plR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~~l~~~r~~~--~~pLFq~~~~~~~~~~~~~~~~~~~~~~~ 1484 (3956)
T PRK12467 1408 VLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVEALQPERSLS--HSPLFQVMFNHQRDDHQAQAQLPGLSVES 1484 (3956)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHHhcccccCC--CCCceeEEEEeecccccccccCCCceeEe
Confidence 45677888899999999999999888 999999999 999999999855 445699999999754322 111 1
Q ss_pred cCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCCC
Q 005501 87 FPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH 163 (693)
Q Consensus 87 ~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~ 163 (693)
.......++|||++.+.+.++++.+.+ |++ ++|++.++++|.++|.++|+++..+++.+...+ +...+....
T Consensus 1485 ~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~~~~ 1559 (3956)
T PRK12467 1485 LSWESQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAERRQI 1559 (3956)
T ss_pred eecCCcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHhhhh
Confidence 111235678999999888888898889 999 999999999999999999999988887776664 444333344
Q ss_pred CCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEc
Q 005501 164 GGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDM 240 (693)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~ 240 (693)
...|+.+........+++. ..+|+++|+++|+++.++ ++||+||+++++++|++|+++ +++|++|+|++
T Consensus 1560 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~ 1631 (3956)
T PRK12467 1560 LEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVLVGIAV 1631 (3956)
T ss_pred HHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 4567765443332333332 346689999999999877 999999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCC
Q 005501 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND 320 (693)
Q Consensus 241 ~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (693)
+||+++++++|||+|+|++|+|+||.+|.+|+.+++++++++++|++....... ........+.++..
T Consensus 1632 ~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~--- 1699 (3956)
T PRK12467 1632 ERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARL---------PLPDGLRSLVLDQE--- 1699 (3956)
T ss_pred cCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhC---------ccccCCcEEEeccc---
Confidence 999999999999999999999999999999999999999999999987532110 00001112222110
Q ss_pred CCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEE
Q 005501 321 VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVY 400 (693)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 400 (693)
.++..... ...+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|++
T Consensus 1700 ------------~~~~~~~~-----~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~ 1762 (3956)
T PRK12467 1700 ------------DDWLEGYS-----DSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVV 1762 (3956)
T ss_pred ------------cchhccCC-----CCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEE
Confidence 00001000 1112233467999999999999999999999999999999999889999999999
Q ss_pred EEeCCccccchhHHHHHHHHcCCEEEEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEe
Q 005501 401 CWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (693)
Q Consensus 401 l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~ 478 (693)
++++|++|+++++++|.+|++|+++++++.. .++..+++.|+++++|++.++|++++.|.+... ....+++||.+++
T Consensus 1763 l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~ 1841 (3956)
T PRK12467 1763 LQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVC 1841 (3956)
T ss_pred EEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEE
Confidence 9999999999999999999999999998743 368899999999999999999999999987422 2345789999999
Q ss_pred ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcC----CCCccCccCCCCCCceEEEECCCCCCCCCCCCcee
Q 005501 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (693)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giG 554 (693)
|||++++++.+.|.+.+++..++|.||+||+++.++..... ......+||+|++|++++|+|++++++|.|++ |
T Consensus 1842 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~--G 1919 (3956)
T PRK12467 1842 GGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVA--G 1919 (3956)
T ss_pred ccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCc--e
Confidence 99999999999888887778899999999999765543221 11234689999999999999999999999995 9
Q ss_pred eEEE-----ecccCCCcccccccccccccccccccC-CCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHH
Q 005501 555 EVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 628 (693)
Q Consensus 555 el~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE 628 (693)
||+| ++||++ +++.|+++|+.+|+. +|.|||||||+|+|++||+|+|+||+|+|||++|+||+|+|||
T Consensus 1920 El~i~G~~v~~GYl~------~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE 1993 (3956)
T PRK12467 1920 ELYLGGVGLARGYLN------RPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIE 1993 (3956)
T ss_pred EEEeccccccccccC------ChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHH
Confidence 9998 578888 556899999999985 4789999999999999999999999999999999999999999
Q ss_pred HHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCC--------ChHHHHHHHHHHHHhhcCCCceec
Q 005501 629 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS--------QPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 629 ~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~--------~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++|. +||+|.+|+|++.+ ..++ +.++|||++.++... ..++++++++++||+||+|.+++.
T Consensus 1994 ~~l~-~~p~V~~a~vv~~~-~~~~-~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~ 2062 (3956)
T PRK12467 1994 ARLR-EQGGVREAVVIAQD-GANG-KQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVF 2062 (3956)
T ss_pred HHHH-hCCCcceEEEEEec-CCCC-cEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhh
Confidence 9995 99999999999986 3344 899999998754321 346799999999999999998875
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6e-83 Score=841.50 Aligned_cols=614 Identities=15% Similarity=0.139 Sum_probs=503.4
Q ss_pred HcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCC--------Ccc
Q 005501 15 KVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP--------PLY 85 (693)
Q Consensus 15 ~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~--------~~~ 85 (693)
++++.+.+..+|.++|+++++...++ +||++||++ |++.++.. .+ ||||+||++||..... ...
T Consensus 2932 p~r~~~~~~~~~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~~~~~----~~--~lf~~~~~~~~~~~~~~~~~~~~~~~~ 3004 (3956)
T PRK12467 2932 PVIASPRAEQTVSDWLQQVQAQNLALREFEHTPLAD-IQRWAGQG----GE--ALFDSILVFENYPISEALKQGAPSGLR 3004 (3956)
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHhhccC----CC--CCcceEEEeecCCchhhhhccCCCCce
Confidence 44678888999999999999998888 999999999 99998632 23 5699999999864221 111
Q ss_pred ccC-CcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCC
Q 005501 86 WFP-SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKS 161 (693)
Q Consensus 86 ~~~-~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~ 161 (693)
..+ .....++|+|++.+.. ++++.+.+ |++ ++|++.++++|.++|.++|+++..+++.+...+ +...+..
T Consensus 3005 ~~~~~~~~~~~~~l~l~~~~-~~~~~~~~~y~~-----~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~~~~ 3078 (3956)
T PRK12467 3005 FGAVSSREQTNYPLTLAVGL-GDTLELEFSYDR-----QHFDAAAIERLAESFDRLLQAMLNNPAARLGELPTLAAHERR 3078 (3956)
T ss_pred eecccccccccCceEEEecc-CcceeEEEEech-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccCCCHHHHH
Confidence 111 1134478888888765 56788888 998 999999999999999999999987777765553 2222222
Q ss_pred CCCCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEE
Q 005501 162 KHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238 (693)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i 238 (693)
.....|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|++|+++ +++|++|+|
T Consensus 3079 ~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l 3150 (3956)
T PRK12467 3079 QVLHAWNATAAAYPSERLVHQLIEAQVARTPEAPALVFGDQ--------QLSYAELNRRANRLAHRLIAIGVGPDVLVGV 3150 (3956)
T ss_pred HHHHhhccCCCCCCccccHHHHHHHHHHhCCCcceEeeCCc--------ccCHHHHHHHHHHHHHHHHHcCCCCCCeEEE
Confidence 334568765544333333332 346789999999999887 999999999999999999999 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCC
Q 005501 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG 318 (693)
Q Consensus 239 ~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (693)
+++||+++++++|||+|+|++|||+||.+|.+|+.+++++++++++|++....... ........+.++.
T Consensus 3151 ~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~---------~~~~~~~~~~~~~-- 3219 (3956)
T PRK12467 3151 AVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQL---------PAPAGDTALTLDR-- 3219 (3956)
T ss_pred EeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhc---------ccccCCceeeecc--
Confidence 99999999999999999999999999999999999999999999999987532110 0000111111110
Q ss_pred CCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCC
Q 005501 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGD 398 (693)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d 398 (693)
...... ....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|
T Consensus 3220 ----------------~~~~~~----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d 3279 (3956)
T PRK12467 3220 ----------------LDLNGY----SENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDAND 3279 (3956)
T ss_pred ----------------hhhccc----CCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCC
Confidence 000000 011122345689999999999999999999999999999999998999999999
Q ss_pred EEEEeCCccccchhHHHHHHHHcCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEE
Q 005501 399 VYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFA 477 (693)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~ 477 (693)
++++++|++|+.+++++|.+|+.|+++++++. ..++..+++.|++++||++.++|++++.|++.. ...++++||.++
T Consensus 3280 ~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~--~~~~~~~lr~~~ 3357 (3956)
T PRK12467 3280 RVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA--GGADCASLDIYV 3357 (3956)
T ss_pred EEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--cccCCCCceEEE
Confidence 99999999999999999999999999999883 257889999999999999999999999998653 234578999999
Q ss_pred eecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCC----CCccCccCCCCCCceEEEECCCCCCCCCCCCce
Q 005501 478 STGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (693)
Q Consensus 478 ~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~gi 553 (693)
+|||++++++.+++.+.++++.++|.||+||+++.++...... .....+||+|++|++++|+|++++++|.|++
T Consensus 3358 ~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~-- 3435 (3956)
T PRK12467 3358 FGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVA-- 3435 (3956)
T ss_pred EecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCC--
Confidence 9999999999998888877889999999999987655432211 1234689999999999999999999999995
Q ss_pred eeEEE-----ecccCCCccccccccccccccccccc-CCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 554 GEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 554 Gel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~-~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
|||+| ++||++ ++++|+++|+.+|+ .+|.|||||||+|+|++||+|+|+||+|+|||+||+||+|+||
T Consensus 3436 GEL~i~G~~v~~GY~~------~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EI 3509 (3956)
T PRK12467 3436 GELYIGGVGLARGYHQ------RPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEI 3509 (3956)
T ss_pred ceEEEcchhhhhhccC------CcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHH
Confidence 99998 678888 56699999999998 6788999999999999999999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
|++|. +||+|.+|+|++.++ ..+ +.++|||++.++...+.++++++++++||.||+|.+++.+
T Consensus 3510 E~~l~-~~p~V~~a~v~~~~~-~~~-~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l 3572 (3956)
T PRK12467 3510 EARLL-QHPSVREAVVLARDG-AGG-KQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVL 3572 (3956)
T ss_pred HHHHh-hCcccceEEEEEecC-CCC-cEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeee
Confidence 99995 999999999998754 345 8999999988755566789999999999999999998753
No 4
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-80 Score=831.74 Aligned_cols=611 Identities=18% Similarity=0.208 Sum_probs=504.8
Q ss_pred HHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCCC----ccc--
Q 005501 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----LYW-- 86 (693)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~~----~~~-- 86 (693)
++++++++...+|.++|+++++...++ +||++||++ |++.+++.|+.+. .|+||+||++++...... ...
T Consensus 2891 lPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~--~plf~~~~~~~~~~~~~~~~~~~~~~~ 2967 (5163)
T PRK12316 2891 QVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQPERSLSH--SPLFQVMYNHQSGERAAAQLPGLHIES 2967 (5163)
T ss_pred eeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhccccccCC--CCceeEEEeeeccccccccCCCceeEe
Confidence 455678888999999999999999888 999999999 9999999988554 455999999998653321 111
Q ss_pred cCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCCC
Q 005501 87 FPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH 163 (693)
Q Consensus 87 ~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~ 163 (693)
.......+++||.+.+.+.++++...+ |+. ++|+++++++|.++|.++|+++...++.+...+ +...+....
T Consensus 2968 ~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~~~ 3042 (5163)
T PRK12316 2968 FAWDGAATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEERGQL 3042 (5163)
T ss_pred eeccCCccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHHHH
Confidence 111234578999999888888898889 999 999999999999999999999987776665553 222222222
Q ss_pred CCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEc
Q 005501 164 GGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDM 240 (693)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~ 240 (693)
...|+..........+++. ..+|+++|+++|+++.++ .+||+||+++++++|++|++. +++|++|+|++
T Consensus 3043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l~~ 3114 (5163)
T PRK12316 3043 LEAWNATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLVGVAV 3114 (5163)
T ss_pred HHHhCCCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 3457655443333333332 446789999999999887 999999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCC
Q 005501 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND 320 (693)
Q Consensus 241 ~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (693)
+||+++++++|||+|+|++|||+||.+|.+|+.+++++++++++|++.... .+ ......++.++...
T Consensus 3115 ~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~-----~~------~~~~~~~~~~~~~~-- 3181 (5163)
T PRK12316 3115 ERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLR-----LP------LAQGVQVLDLDRGD-- 3181 (5163)
T ss_pred cCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCcccc-----CC------ccCCccEEEecccc--
Confidence 999999999999999999999999999999999999999999999986430 00 00011122221100
Q ss_pred CCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEE
Q 005501 321 VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVY 400 (693)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 400 (693)
.. .....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|++
T Consensus 3182 ----------------~~-----~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~ 3240 (5163)
T PRK12316 3182 ----------------EN-----YAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGDRV 3240 (5163)
T ss_pred ----------------cc-----ccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCcccEE
Confidence 00 001112233567899999999999999999999999999999999899999999999
Q ss_pred EEeCCccccchhHHHHHHHHcCCEEEEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEe
Q 005501 401 CWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (693)
Q Consensus 401 l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~ 478 (693)
++++|++||.+++++|.+|++|+++++.+.. .++..+.+.++++++|++.++|+++..+++.. ....+++||.+++
T Consensus 3241 l~~~~~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~--~~~~~~~lr~~~~ 3318 (5163)
T PRK12316 3241 LQFTTFSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEE--DAHRCTSLKRIVC 3318 (5163)
T ss_pred EeecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc--ccccCCcceEEEE
Confidence 9999999999999999999999999998643 36788999999999999999999999988653 2334678999999
Q ss_pred ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCc-CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEE
Q 005501 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557 (693)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~ 557 (693)
|||++++++.++|.. +.+++|.|||||+++.++.... .......+||+|++|++++|+|++++++|.|++ |||+
T Consensus 3319 gGe~l~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--GEl~ 3393 (5163)
T PRK12316 3319 GGEALPADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL--GELY 3393 (5163)
T ss_pred ccccCCHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC--ceEE
Confidence 999999999888872 5679999999999986654433 222345789999999999999999999999995 9999
Q ss_pred E-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 558 L-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 558 v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
| ++||++ ++++|+++|+.+|+.+|.|||||||+|||++||.|+|+||+|+|||++|+||+|+|||++|.
T Consensus 3394 i~G~~v~~GY~~------~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G~rIel~eIE~~l~ 3467 (5163)
T PRK12316 3394 LGGEGLARGYHN------RPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRGFRIELGEIEARLL 3467 (5163)
T ss_pred ecccccchhcCC------ChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCcEeeChHHHHHHHH
Confidence 8 678888 56699999999999889999999999999999999999999999999999999999999995
Q ss_pred ccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 633 ~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
+||+|.+|+|++.+ + ++++|||++..+.....++++++|+++||.||+|..++.+
T Consensus 3468 -~~~~V~~a~v~~~~----~-~~l~a~vv~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~ 3522 (5163)
T PRK12316 3468 -EHPWVREAVVLAVD----G-RQLVAYVVPEDEAGDLREALKAHLKASLPEYMVPAHLLFL 3522 (5163)
T ss_pred -hCCCcceEEEEEcc----C-CeEEEEEEcCCcCcccHHHHHHHHHhhCCcccCcceeeeH
Confidence 99999999999865 3 7899999987655555688999999999999999988753
No 5
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-80 Score=830.64 Aligned_cols=618 Identities=19% Similarity=0.195 Sum_probs=507.4
Q ss_pred HHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCC-------C--
Q 005501 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------P-- 83 (693)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~-------~-- 83 (693)
+++++.+.+..+|.++|+++++...++ +||++||++ |++.|++.|+.+ ..|+||+||++|+..... .
T Consensus 342 lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l~~~r~~~--~~plf~~~~~~~~~~~~~~~~~~~~~~~ 418 (5163)
T PRK12316 342 QVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEALKVERSLS--HSPLFQVMYNHQPLVADIEALDTVAGLE 418 (5163)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhCCCCCCC--CCCcEEEEEEeecccccccccccCCCce
Confidence 466788888899999999999999888 999999999 999999999855 455699999999732211 1
Q ss_pred ccccCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCC
Q 005501 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (693)
Q Consensus 84 ~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~ 160 (693)
....+......+|||.+.+.+.++++.+.+ |+. ++|++++++++.++|.++|+++..+++.+...+ +...+.
T Consensus 419 ~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~ 493 (5163)
T PRK12316 419 FGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDAEER 493 (5163)
T ss_pred EEeeccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCHHHH
Confidence 111122235578999999888888999999 999 999999999999999999999988777776664 333222
Q ss_pred CCCCCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 005501 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (693)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~ 237 (693)
......|+..........+++. ..+++++|+++|+++.++ ++||+||+++++++|+.|++. +++|++|+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~ 565 (5163)
T PRK12316 494 GQLVEGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGPDVLVG 565 (5163)
T ss_pred HHHHHHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 2223345543322211222221 345689999999998777 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCC
Q 005501 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (693)
Q Consensus 238 i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (693)
|+++|++++++++|||+|+|++|||+||.+|.+++.+++++++++++|++....... + ......++.++..
T Consensus 566 l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~---~------~~~~~~~~~~~~~ 636 (5163)
T PRK12316 566 VAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKL---P------LAAGVQVLDLDRP 636 (5163)
T ss_pred EEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhC---C------cccCceEEEecCc
Confidence 999999999999999999999999999999999999999999999999987532110 0 0001111222110
Q ss_pred CCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCC
Q 005501 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (693)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (693)
. ....... ...+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++
T Consensus 637 ~---------------~~~~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~ 696 (5163)
T PRK12316 637 A---------------AWLEGYS-----EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVG 696 (5163)
T ss_pred c---------------hhhccCC-----CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCC
Confidence 0 0000000 1111223467899999999999999999999999999999999999999999
Q ss_pred CEEEEeCCccccchhHHHHHHHHcCCEEEEecC--CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccE
Q 005501 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRS 475 (693)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~--~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~ 475 (693)
|++++++|++|+++++++|.+|++|+++++++. ..++..+++.|++++||++.++|++++.|++... ..++++||.
T Consensus 697 d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~ 774 (5163)
T PRK12316 697 DTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRR 774 (5163)
T ss_pred CEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccE
Confidence 999999999999999999999999999999864 3578899999999999999999999999987532 335789999
Q ss_pred EEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCc-CCCCccCccCCCCCCceEEEECCCCCCCCCCCCcee
Q 005501 476 FASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (693)
Q Consensus 476 v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giG 554 (693)
+++|||++++++.+.+.+.+++++++|.||+||+++.++.... .......++|+|++|++++|+|++++++|.|+. |
T Consensus 775 ~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--G 852 (5163)
T PRK12316 775 IVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVL--G 852 (5163)
T ss_pred EEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCc--e
Confidence 9999999999999998888788899999999999864433222 223345689999999999999999999999995 9
Q ss_pred eEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHH
Q 005501 555 EVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 629 (693)
Q Consensus 555 el~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~ 629 (693)
||+| +.||++ +++.|+++|..+|+.+|.+||+|||+|++++||+|+|+||+|+|||++|+||+|+|||+
T Consensus 853 El~i~G~~v~~GYl~------~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~ 926 (5163)
T PRK12316 853 ELYLAGRGLARGYHG------RPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEA 926 (5163)
T ss_pred EEEecccccChhhCC------ChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHH
Confidence 9998 568887 56689999999998888999999999999999999999999999999999999999999
Q ss_pred HHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 630 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 630 ~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+|. +||+|++|+|++.+ + +.++|||++.++...+.++++++++++||+||+|..++.
T Consensus 927 ~l~-~~p~V~~a~V~~~~----~-~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~ 983 (5163)
T PRK12316 927 RLL-EHPWVREAAVLAVD----G-KQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLA 983 (5163)
T ss_pred HHH-hCCCcceEEEEEcC----C-CeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEE
Confidence 995 99999999999875 4 799999999876666778999999999999999998875
No 6
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.3e-79 Score=759.56 Aligned_cols=617 Identities=18% Similarity=0.164 Sum_probs=486.7
Q ss_pred HHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCCCcccc----C
Q 005501 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWF----P 88 (693)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~~~~~~----~ 88 (693)
++++++.....+|.++|+++++...++ +||+|||++ |++.++..+ +..|+||++|++++.......... .
T Consensus 297 lplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~----~~~~lf~~~~~~~~~~~~~~~~~~~~~~~ 371 (1296)
T PRK10252 297 LPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVRDSGRAA----GDEPLFGPVLNIKVFDYQLDFPGVQAQTH 371 (1296)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHHHhcCcc----CCCCceeEEEEeeecccccCcCCccceee
Confidence 345677778889999999999999888 999999999 999997433 344669999999875432111000 0
Q ss_pred CcccccccchHHHHH-HhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCCCC
Q 005501 89 SLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHG 164 (693)
Q Consensus 89 ~~~~~~~~dl~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~ 164 (693)
.......+||++.+. +.++++...+ |++ ++|++.+++++.++|..+|+++..+++.+...+ +...+... .
T Consensus 372 ~~~~~~~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~~-~ 445 (1296)
T PRK10252 372 TLATGPVNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYAQ-L 445 (1296)
T ss_pred ecCCCccCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHHH-H
Confidence 001112347776665 3356777888 998 999999999999999999999987776665443 22211111 2
Q ss_pred CCcCCCCccchhhhhcc-CcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 005501 165 GTWLPGSVLNIAECCLL-PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (693)
Q Consensus 165 ~~~~~~~~~~~~~~~l~-~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~ 242 (693)
..|+..........+.+ ...+++++|+++|+++.+. ++||+||+++++++|++|.+. +++|++|+|+++|
T Consensus 446 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~ 517 (1296)
T PRK10252 446 AQVNATAVEIPETTLSALVAQQAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVAVALPR 517 (1296)
T ss_pred HHhcCCCCCCCcCCHHHHHHHHHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC
Confidence 33443322211111111 1234578999999998877 999999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCC
Q 005501 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG 322 (693)
Q Consensus 243 s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (693)
++++++++|||+++|++|+|+||.+|.+++.+++++++++++|++......... .+. ....
T Consensus 518 ~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~----------~~~-~~~~-------- 578 (1296)
T PRK10252 518 SVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFAD----------VPD-LTSL-------- 578 (1296)
T ss_pred CHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhccc----------CCC-ceee--------
Confidence 999999999999999999999999999999999999999999998753211100 000 0000
Q ss_pred CCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEE
Q 005501 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (693)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (693)
.+........ ........++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++
T Consensus 579 --------~~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~ 644 (1296)
T PRK10252 579 --------CYNAPLAPQG------AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQ 644 (1296)
T ss_pred --------eccccccccc------CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 0000000000 00111235789999999999999999999999999999999999999999999999
Q ss_pred eCCccccchhHHHHHHHHcCCEEEEecC--CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCC--CCCCccccEEEe
Q 005501 403 PTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFAS 478 (693)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lvi~~~--~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~lr~v~~ 478 (693)
.+|++|+++++++|.+|+.|+++++.+. ..++..+++.|++++||++.++|+++..+++..... ...++++|.+++
T Consensus 645 ~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~ 724 (1296)
T PRK10252 645 KTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFC 724 (1296)
T ss_pred eCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEE
Confidence 9999999999999999999999999864 347889999999999999999999999988653222 234678999999
Q ss_pred ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCC------CCccCccCCCCCCceEEEECCCCCCCCCCCCc
Q 005501 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (693)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~g 552 (693)
|||++++++.+.+.+.+ +++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|.|++
T Consensus 725 gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~- 802 (1296)
T PRK10252 725 SGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVA- 802 (1296)
T ss_pred ecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCc-
Confidence 99999999998887764 688999999999987655433221 2234689999999999999999999999995
Q ss_pred eeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 553 iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
|||+| +.||++ +++.|+++|..+|+.+|.+||+|||+|++++||+++|+||+|+|||++|+||+|.||
T Consensus 803 -Gel~i~g~~~~~GY~~------~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eI 875 (1296)
T PRK10252 803 -GDLYLTGIQLAQGYLG------RPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEI 875 (1296)
T ss_pred -eEEEecccccchhhCC------CcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHH
Confidence 99998 568887 556899999999988889999999999999999999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeec----CCC-CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 628 ERVCDQADESILETAAISVS----PAG-GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~----~~~-~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|++|. +||+|.+|+|++.. +.. ++...+++||+...+...+.++|+++++++||.||+|..++.
T Consensus 876 E~~l~-~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~ 944 (1296)
T PRK10252 876 DRAMQ-ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQ 944 (1296)
T ss_pred HHHHH-hCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEE
Confidence 99995 99999999887652 111 222589999999877666788999999999999999998875
No 7
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1e-79 Score=818.16 Aligned_cols=624 Identities=16% Similarity=0.163 Sum_probs=498.6
Q ss_pred CCcccccChhHHHHcCCCchhh---HHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhccc
Q 005501 2 GKNIREVGVEDLMKVGLKLEEA---EEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDA 77 (693)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~ 77 (693)
|-.||.+| .+++..+. .++.++|+++++...++ +||++||++ |++..+..+. . ||||++|++||
T Consensus 3547 G~fiNtlp------~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~-i~~~~~~~~~---~--~LF~t~~v~~n 3614 (4334)
T PRK05691 3547 GLFINSIA------LRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVA-IQECSELPKG---Q--PLFDSLFVFEN 3614 (4334)
T ss_pred cccccccc------eEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHH-HHHHhcCCCC---C--CCccEEEEeec
Confidence 44455554 45565543 69999999999998888 999999999 9988765332 3 56999999998
Q ss_pred CCCCCCc------cc--cCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhccccee
Q 005501 78 SIKGPPL------YW--FPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFR 148 (693)
Q Consensus 78 ~~~~~~~------~~--~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~ 148 (693)
....... .. .......++|+|++.+.. ++.+...+ |++ ++|++.++++|.++|.++|+++...+.
T Consensus 3615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~~~~~ 3688 (4334)
T PRK05691 3615 APVEVSVLDRAQSLNASSDSGRTHTNFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALVQGFH 3688 (4334)
T ss_pred CCcchhhhcccccccccccccccccCCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhCcC
Confidence 7533210 00 011124467778775543 45677777 998 999999999999999999999987777
Q ss_pred ccceee--ccCCCCCCCCCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHH
Q 005501 149 EAPKCI--LDRTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN 224 (693)
Q Consensus 149 ~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~ 224 (693)
.+...+ +...+.......|+..........+++. +.|++++||++|+++.+. ++||+||+++++++|+
T Consensus 3689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~ 3760 (4334)
T PRK05691 3689 GDLSELPLLGEQERDFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGH 3760 (4334)
T ss_pred CChhhcCCCCHHHHHHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHH
Confidence 766554 2322222334467665444444444443 457789999999999888 9999999999999999
Q ss_pred HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhH
Q 005501 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303 (693)
Q Consensus 225 ~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~ 303 (693)
+|++. +++|++|+|++++|+++++++|||+|+|++||||||++|.+|+.+++++++++++|++....... ..+
T Consensus 3761 ~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~------~~~ 3834 (4334)
T PRK05691 3761 ALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQA------RAL 3834 (4334)
T ss_pred HHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchh------hhh
Confidence 99999 99999999999999999999999999999999999999999999999999999999998643211 111
Q ss_pred hhcCC----CceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecch
Q 005501 304 LGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQL 379 (693)
Q Consensus 304 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~ 379 (693)
.+... ..+++. ++...... ....+.....++++|||+|||||||+||||+++|+
T Consensus 3835 ~~~~~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~ 3892 (4334)
T PRK05691 3835 LDELGCANRPRLLVW------------------EEVQAGEV----ASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQR 3892 (4334)
T ss_pred hcccccccccceeee------------------cccccccc----cccCCCCCCCCCceEEEEECCCCCCCCCEEEeehH
Confidence 11110 011111 11100000 01112234567999999999999999999999999
Q ss_pred hHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC--CChhhHHHHHHHcCCcEEeechHHHH
Q 005501 380 SSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVK 457 (693)
Q Consensus 380 ~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~ 457 (693)
++++.+.+....++++++|+++++++++||.+++++|.+|+.|+++++++.. .++..+++.+++++||++.++|++++
T Consensus 3893 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~ 3972 (4334)
T PRK05691 3893 GMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQ 3972 (4334)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHH
Confidence 9999999998999999999999999999999999999999999999998753 36789999999999999999999999
Q ss_pred HHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcC---CCCccCccCCCCCCc
Q 005501 458 AWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTA 534 (693)
Q Consensus 458 ~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~ 534 (693)
.++... ...+++||.+++|||++++++.+.|.+..++++++|.||+|||++.++..... ......+||+|++|+
T Consensus 3973 ~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~ 4049 (4334)
T PRK05691 3973 GMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNN 4049 (4334)
T ss_pred HHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCC
Confidence 987643 23478999999999999999998888888889999999999999765543321 122346899999999
Q ss_pred eEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccC-CCceeeeecceEEEecCCcEEEE
Q 005501 535 GLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQ 608 (693)
Q Consensus 535 ~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~ 608 (693)
+++|+|++++++|.|.+ |||+| ++||++ ++++|+++|+.+|+. +|.|||||||+|+|++||+|+|+
T Consensus 4050 ~~~v~d~~~~~~p~g~~--GEL~i~G~~v~~GY~~------~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~ 4121 (4334)
T PRK05691 4050 RLYLLDEALELVPLGAV--GELCVAGTGVGRGYVG------DPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYV 4121 (4334)
T ss_pred EEEEECCCCCCCCCCCc--eEEEEecccccccccC------CcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEe
Confidence 99999999999999995 99998 678888 666999999999984 57899999999999999999999
Q ss_pred eecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCC---ChHHHHHHHHHHHHhhc
Q 005501 609 GRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKL 685 (693)
Q Consensus 609 GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~---~~~~l~~~l~~~L~~~m 685 (693)
||+|+|||+||+||+++|||++|. ++|+|.+|+|+... ...+ +.++||++...+... ..++++++|+++||.||
T Consensus 4122 GR~d~qvki~G~riel~eIE~~l~-~~~~v~~a~v~~~~-~~~~-~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ym 4198 (4334)
T PRK05691 4122 GRIDHQVKIRGYRIELGEIEARLH-EQAEVREAAVAVQE-GVNG-KHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYM 4198 (4334)
T ss_pred cccCCcEEeceEEecHHHHHHHHH-hCCCccEEEEEEec-CCCC-cEEEEEEeCCcccccchHHHHHHHHHHHhhCChhh
Confidence 999999999999999999999995 99999999887654 3445 799999998764322 23679999999999999
Q ss_pred CCCceecC
Q 005501 686 NPLFKVWC 693 (693)
Q Consensus 686 ~P~~~v~~ 693 (693)
+|.+++.+
T Consensus 4199 vP~~~~~~ 4206 (4334)
T PRK05691 4199 VPLHWLWL 4206 (4334)
T ss_pred cCcceeec
Confidence 99998753
No 8
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.4e-77 Score=642.96 Aligned_cols=478 Identities=27% Similarity=0.421 Sum_probs=407.7
Q ss_pred CcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC
Q 005501 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT 243 (693)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~s 243 (693)
+|+.++.+|.++++++++... ..+|++|+++.++. .+. +++||+||.+.++++|+.|++. + +||||+|++|++
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~-~~~~~~aii~~~e~--~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~ 75 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEA-DRPDDTAIIFDGED--GLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNS 75 (528)
T ss_pred CCcCCceeechhhhhhhhhhc-cCCCceEEEEEcCC--CCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCC
Confidence 599999999999999987532 34899999999762 122 6999999999999999999975 7 999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCC
Q 005501 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (693)
Q Consensus 244 ~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (693)
++.+++||||+|+||+++|+.+.++++.++++++++++++||+++...+.++..+....+.+.... ++++....
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~----- 149 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG----- 149 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc-----
Confidence 999999999999999999999999999999999999999999999999888888877766665544 44443221
Q ss_pred CCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHH-HHhchhcCCCCCCEEEE
Q 005501 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCW 402 (693)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~ 402 (693)
.+|.+....... .......+++|+++|+|||||||+||||+++|++++... ......+++.++|++++
T Consensus 150 ------~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~ 218 (528)
T COG0365 150 ------LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWN 218 (528)
T ss_pred ------ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEe
Confidence 567777665432 233344788999999999999999999999999865444 44445788889999999
Q ss_pred eCCccccchhHH-HHHHHHcCCEEEEecCCCC--hhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEee
Q 005501 403 PTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (693)
Q Consensus 403 ~~~~~~~~~~~~-~~~~L~~G~~lvi~~~~~~--~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~g 479 (693)
.++++|.++.+. ++++|++|++++++++.++ +..++++|+++++|.++++|+.+++|.+.+....+++++||.+.++
T Consensus 219 ~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~Sa 298 (528)
T COG0365 219 SSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSA 298 (528)
T ss_pred CCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeecc
Confidence 999999999965 8999999999999987665 7899999999999999999999999999876667889999999999
Q ss_pred cCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe
Q 005501 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (693)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~ 559 (693)
||+|+++.++|+.+.+ +++|.+.||+||+++++....+ +...++.|+|+||+++.|+|++|+++++|+ |+|++.
T Consensus 299 GEPLnpe~~~w~~~~~-g~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~---G~Lvi~ 372 (528)
T COG0365 299 GEPLNPEAFEWFYSAL-GVWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV---GELVVR 372 (528)
T ss_pred CCCCCHHHHHHHHHHh-CCCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc---eEEEEe
Confidence 9999999999999887 4999999999999977666655 444555599999999999999999999997 899993
Q ss_pred c-------ccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 560 P-------LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 560 ~-------gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
. +|++ +++.+.+.|.. . ||.|||.+++|+||+++|+||.||+||+.|+||.+.|||++|.
T Consensus 373 ~~~p~~~~~~w~------d~er~~~~y~~------~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~ 439 (528)
T COG0365 373 LPWPGMALTYWN------DPERYKEAYFG------R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLL 439 (528)
T ss_pred CCCchhhhhhhC------CHHHHHHHHhh------c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHH
Confidence 2 4555 33344333321 1 9999999999999999999999999999999999999999997
Q ss_pred ccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCC
Q 005501 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL 688 (693)
Q Consensus 633 ~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~ 688 (693)
+||+|.||+||+++|+..| +.++|||++++|...+ +|++.|++++.+.+.|.
T Consensus 440 -~hP~VaEaAvVg~pd~~kg-~~v~afVvL~~g~~~~--~L~~ei~~~vr~~~~~~ 491 (528)
T COG0365 440 -AHPAVAEAAVVGVPDPGKG-QIVLAFVVLAAGVEPN--ELAEEIRRHVARNIGPH 491 (528)
T ss_pred -hCcceeeeEEEeccCCCCC-cEEEEEEEecCCCChH--HHHHHHHHHHHhccCcc
Confidence 9999999999999999888 9999999999987665 77777777666555553
No 9
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.3e-79 Score=757.63 Aligned_cols=640 Identities=16% Similarity=0.122 Sum_probs=490.1
Q ss_pred HHHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCCCccccCCcc
Q 005501 13 LMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLD 91 (693)
Q Consensus 13 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~~~~~~~~~~ 91 (693)
.+++++++++..+|.++|+++++...++ +||++||++ |++.+++.|+.++++ |+||++|..+...... ...
T Consensus 81 ~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~~~~~~p-~lf~~~~~~~~~~~~~------~~~ 152 (1389)
T TIGR03443 81 PFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSEHIQAAKKLERTP-PLFRLAFQDAPDNQQT------TYS 152 (1389)
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccCCCCCC-ccEEEEeecCCccccc------ccc
Confidence 4578889999999999999999999888 999999999 999999988866555 4799776543321111 113
Q ss_pred cccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCCC-----
Q 005501 92 QSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH----- 163 (693)
Q Consensus 92 ~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~----- 163 (693)
..+++||.+.+.+.++++...+ |+. ++|++++++++.++|..+|+++...++.+...+ +...+....
T Consensus 153 ~~~~~dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~ 227 (1389)
T TIGR03443 153 TGSTTDLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDPTK 227 (1389)
T ss_pred cCCccceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhcccc
Confidence 4578899999888888899999 999 999999999999999999999987777776553 222211110
Q ss_pred CCCcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCC-CCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcC
Q 005501 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMP 241 (693)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~ 241 (693)
...|... . ......+. .+|+++|+++|+++..... .....+++||+||+++++++|++|++. +++|++|+|+++
T Consensus 228 ~~~~~~~-~-~~l~~~~~--~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~ 303 (1389)
T TIGR03443 228 DLDWSGF-R-GAIHDIFA--DNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAY 303 (1389)
T ss_pred ccCcCcc-c-CcHHHHHH--HHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEec
Confidence 1123211 0 11122232 3457899999998742210 011234899999999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC-----CceEEEcC
Q 005501 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-----LKAIVLPA 316 (693)
Q Consensus 242 ~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 316 (693)
|++++++++|||+++|++|+|+||.+|.+++.+++++++++++|++..... ............. ...+.+..
T Consensus 304 ~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (1389)
T TIGR03443 304 RGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGT---LDQLVRDYIDKELELRTEIPALALQD 380 (1389)
T ss_pred CCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccc---cchhhhhhhhcccccccccceEEecc
Confidence 999999999999999999999999999999999999999999998764210 0011111110000 00111110
Q ss_pred CCCCCCCCCCCCccc--HHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCC
Q 005501 317 IGNDVGIPLREQDLS--WKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL 394 (693)
Q Consensus 317 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~ 394 (693)
.... ..+... ..+....... ...........++++|||+|||||||+||||+++|+++.+.+.+....+++
T Consensus 381 ~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~ 453 (1389)
T TIGR03443 381 DGSL-----VGGSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGL 453 (1389)
T ss_pred cccc-----cccccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCC
Confidence 0000 000000 0011100000 000011123457899999999999999999999999999999888888999
Q ss_pred CCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCcc
Q 005501 395 KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (693)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~ 472 (693)
.++|+++++++++|+.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|.... ...+++
T Consensus 454 ~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~ 530 (1389)
T TIGR03443 454 SENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPS 530 (1389)
T ss_pred CCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCC
Confidence 9999999999999999999999999999999998643 25778999999999999999999999987542 234789
Q ss_pred ccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCC----------CCccCccCCCCCCceEEEECCC
Q 005501 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDEC 542 (693)
Q Consensus 473 lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~~~ild~~ 542 (693)
||.+++|||++++...+++....++++++|.||+||++...+...... .....++|+|++|++++|+|++
T Consensus 531 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~ 610 (1389)
T TIGR03443 531 LHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRN 610 (1389)
T ss_pred ccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCc
Confidence 999999999999999888887777889999999999987554322110 0124689999999999999965
Q ss_pred --CCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccC----------------------CCceeeee
Q 005501 543 --GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY----------------------KGMCLRRH 593 (693)
Q Consensus 543 --~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~----------------------~g~~~yrT 593 (693)
++++|.|++ |||+| +.||++ +++.|+++|..+++. ++.+||+|
T Consensus 611 ~~~~~~~~G~~--GEL~i~G~~v~~GY~~------~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~T 682 (1389)
T TIGR03443 611 DRTQTCGVGEV--GEIYVRAGGLAEGYLG------LPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRT 682 (1389)
T ss_pred cCCCcCCCCCc--eEEEecccccchhcCC------ChhHhhhhccCCcccCcccccccccccccccccccCCCccceeec
Confidence 578999995 99998 578887 566899999876541 24689999
Q ss_pred cceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCC-CC----
Q 005501 594 GDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-TS---- 668 (693)
Q Consensus 594 GDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~-~~---- 668 (693)
||+|++++||+|+|+||.|||||++|+||+|.|||++|. +||+|.+++|++.++...+ +.++|||++..+. ..
T Consensus 683 GDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~-~~lva~vv~~~~~~~~~~~~ 760 (1389)
T TIGR03443 683 GDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE-PTLVSYIVPQDKSDELEEFK 760 (1389)
T ss_pred CCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC-eEEEEEEeccCccccccccc
Confidence 999999999999999999999999999999999999995 9999999999998877666 8999999986321 10
Q ss_pred ---------------------ChHHHHHHHHHHHHhhcCCCceec
Q 005501 669 ---------------------QPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 669 ---------------------~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
...+++++++++||.||+|..++.
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~ 805 (1389)
T TIGR03443 761 SEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVP 805 (1389)
T ss_pred cccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEE
Confidence 135799999999999999998764
No 10
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-78 Score=807.49 Aligned_cols=622 Identities=14% Similarity=0.140 Sum_probs=497.8
Q ss_pred HHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCC-----Cc--c
Q 005501 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PL--Y 85 (693)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~-----~~--~ 85 (693)
+++++++++..+|.++|+++++...++ +||++||++ |++.|++.|+.+.++ |||+||++++..... .. .
T Consensus 2021 lPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~p--lf~~~~~~~~~~~~~~~~~~~~~~~ 2097 (4334)
T PRK05691 2021 QVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQPPRSAAYNP--LFQVMCNVQRWEFQQSRQLAGMTVE 2097 (4334)
T ss_pred eeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccccCCCC--ceEEEEEeeccccccccCCCCceeE
Confidence 456788888999999999999999888 999999999 999999999866555 599999998753211 11 1
Q ss_pred ccCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCC
Q 005501 86 WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSK 162 (693)
Q Consensus 86 ~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~ 162 (693)
........++|||.+.+.+.++++...+ |+. ++|++++++++.++|.++|+++...++.+...+ +...+...
T Consensus 2098 ~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 2172 (4334)
T PRK05691 2098 YLVNDARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQQQ 2172 (4334)
T ss_pred eecccCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHHHH
Confidence 1112234678999998888788888888 999 999999999999999999999977766665443 22222111
Q ss_pred CCCCcCCCCccchhhhhccC--cccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 005501 163 HGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (693)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (693)
....|+..........+++. ..+++++|+++|+++.++ ++||+||+++++++|++|++. +++|++|+++
T Consensus 2173 l~~~~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~l~ 2244 (4334)
T PRK05691 2173 LLDSLAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVRVGLA 2244 (4334)
T ss_pred HHHHhCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 12233333222222223332 346689999999999877 999999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc--eEEEcCC
Q 005501 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAI 317 (693)
Q Consensus 240 ~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 317 (693)
++||+++++++|||+|+|++|||+||.+|.+|+.+++++++++++|++....... ...... .+.+...
T Consensus 2245 ~~~s~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~ 2314 (4334)
T PRK05691 2245 LERSLEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEAL----------GELPAGVARWCLEDD 2314 (4334)
T ss_pred eCCCHHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhh----------ccccccceeEEeccc
Confidence 9999999999999999999999999999999999999999999999987532111 000000 1111000
Q ss_pred CCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCC
Q 005501 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (693)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (693)
...+ .... .........++++|||+|||||||+||||+++|+++.+.+.+....++++++
T Consensus 2315 --------------~~~~-~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~ 2374 (4334)
T PRK05691 2315 --------------AAAL-AAYS-----DAPLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRAD 2374 (4334)
T ss_pred --------------hhhh-hcCC-----CCCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcc
Confidence 0000 0000 0011122356899999999999999999999999999999988889999999
Q ss_pred CEEEEeCCccccchhHHHHHHHHcCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEE
Q 005501 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSF 476 (693)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v 476 (693)
|+++++++++|+.+++++|.+|+.|+++++.+. ..++..+++.|+++++|++.++|++++.|...... .....+||.+
T Consensus 2375 d~~l~~~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~lr~i 2453 (4334)
T PRK05691 2375 DCELHFYSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPVRMC 2453 (4334)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCceEE
Confidence 999999999999999999999999999999764 34788999999999999999999999999765322 2345679999
Q ss_pred EeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcC----CCCccCccCCCCCCceEEEECCCCCCCCCCCCc
Q 005501 477 ASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (693)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~g 552 (693)
++|||++++++.+++.+.++...++|.||+||+++..+.+... ......++|+|++|+.++|+|++++++|.|++
T Consensus 2454 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G~~- 2532 (4334)
T PRK05691 2454 ITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQGAT- 2532 (4334)
T ss_pred EEccccCCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCCCc-
Confidence 9999999999999998887777899999999998654332211 11223579999999999999999999999995
Q ss_pred eeeEEE-----ecccCCCcccccccccccccccccccC-CCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHH
Q 005501 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 626 (693)
Q Consensus 553 iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~e 626 (693)
|||+| +.||++ +++.|+++|+.+|+. .|.|||+|||+|++++||+++|+||+|+|||++|+||+|+|
T Consensus 2533 -GEL~i~G~~v~~GY~~------~~~~t~~~F~~~p~~~~~~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~E 2605 (4334)
T PRK05691 2533 -GELYVGGAGLAQGYHD------RPGLTAERFVADPFAADGGRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGE 2605 (4334)
T ss_pred -eEEEecccccCccccC------ChhhhhhhccCCCCCCCCCceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHH
Confidence 99998 578887 566899999999885 47789999999999999999999999999999999999999
Q ss_pred HHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCC------CCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 627 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG------FTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 627 IE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~------~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
||++|. +||+|.+|+|++.+++ .+ +.++||++.... .....++++++++++||.||+|..++.+
T Consensus 2606 IE~~l~-~~p~V~~a~V~~~~~~-~~-~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~v 2675 (4334)
T PRK05691 2606 IESRLL-EHPAVREAVVLALDTP-SG-KQLAGYLVSAVAGQDDEAQAALREALKAHLKQQLPDYMVPAHLILL 2675 (4334)
T ss_pred HHHHHH-hCCCcceEEEEEeeCC-CC-cEEEEEEEecccccccccccccHHHHHHHHHhhCccccCChhheee
Confidence 999995 9999999999988543 44 789999997432 1223478999999999999999988753
No 11
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-74 Score=661.51 Aligned_cols=553 Identities=20% Similarity=0.252 Sum_probs=436.1
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEE
Q 005501 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (693)
Q Consensus 118 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~ 197 (693)
+++|+.+++++++++..||..+.+.+ .+|.++++++++.. ....+||.++.+|.+.++++++.....+|+++|+++
T Consensus 7 ~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~~---~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~ 82 (647)
T PTZ00237 7 PFDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSGD---EIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIY 82 (647)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCCC---CCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEE
Confidence 35688999999999999999999997 68999999998641 223799999999999999988642223799999998
Q ss_pred ecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHH
Q 005501 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (693)
Q Consensus 198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l 276 (693)
.... .+..+++||+||.++++++|+.|+++ |++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++
T Consensus 83 ~~~~--~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 160 (647)
T PTZ00237 83 ECPY--LKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRI 160 (647)
T ss_pred EcCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHH
Confidence 6431 12235899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCeeEEEeecceeeCCccccchhhHhhcC------CCceEEEcCCCC--CC------CCCCCCCcccHHHHhcccCCC
Q 005501 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGN--DV------GIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 277 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~ 342 (693)
++++|++||+++...+..+..+....+.+.. ..+++++..... .. ..........|++++......
T Consensus 161 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (647)
T PTZ00237 161 ETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKEN 240 (647)
T ss_pred HhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccc
Confidence 9999999999876655555444433332211 123443322110 00 000011235577765432110
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchh-HHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
............++|++||+|||||||+||||+++|++ +.+........+....++++++.++++|+++...++.+|+.
T Consensus 241 ~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~ 320 (647)
T PTZ00237 241 NQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSL 320 (647)
T ss_pred cCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhC
Confidence 00111222345679999999999999999999999998 44433333445667788999999999999887778899999
Q ss_pred CCEEEEecCCC-C----hhhHHHHHHHcCCcEEeechHHHHHHHhcCc-----CCCCCCccccEEEeecCCCCcchHHHH
Q 005501 422 GATLALYQGSP-L----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWL 491 (693)
Q Consensus 422 G~~lvi~~~~~-~----~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~-----~~~~~l~~lr~v~~gGe~l~~~~~~~~ 491 (693)
|++++++++.. . +..+++.|++++||++.++|++++.|++... ....++++||.+++|||++++++.+++
T Consensus 321 G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~ 400 (647)
T PTZ00237 321 GNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYI 400 (647)
T ss_pred CcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHH
Confidence 99999987532 2 5689999999999999999999999987532 134568999999999999999999999
Q ss_pred HhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe--------cccC
Q 005501 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF--------PLYL 563 (693)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~--------~gy~ 563 (693)
++.+ +++++|.||+||++++++..........+++|+|++|++++|+|++|++++.|+. |||++. .||+
T Consensus 401 ~~~~-g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~--GEl~v~~p~~p~~~~gy~ 477 (647)
T PTZ00237 401 ENKL-KIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNEI--GEVAFKLPMPPSFATTFY 477 (647)
T ss_pred HHhc-CCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCCc--eEEEEeccCCchhhCcee
Confidence 8876 5899999999999865443333222334789999999999999999999999984 999984 2444
Q ss_pred CCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEE
Q 005501 564 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (693)
Q Consensus 564 ~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~V 643 (693)
+ +++.++++|...+ | ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|
T Consensus 478 ~------~~~~~~~~f~~~~---g--~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaav 545 (647)
T PTZ00237 478 K------NDEKFKQLFSKFP---G--YYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCS 545 (647)
T ss_pred C------CHHHHHHHHhCCC---C--EEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEE
Confidence 4 4456666775322 3 9999999999999999999999999999999999999999996 9999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCC---CCCh----HHHHHHHHHHHHhhcCCCceec
Q 005501 644 ISVSPAGGGPEVLVIFVVLKKGF---TSQP----DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~---~~~~----~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++++++..| +.++|||+++++. ..+. ++|+++++++|+.++.|..++.
T Consensus 546 vg~~~~~~g-~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~ 600 (647)
T PTZ00237 546 IGIYDPDCY-NVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIII 600 (647)
T ss_pred EeeEcCCCC-CEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEE
Confidence 999998888 8999999998532 2343 3567788888999999988765
No 12
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.5e-73 Score=654.19 Aligned_cols=555 Identities=23% Similarity=0.318 Sum_probs=434.6
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcccceeccce--eeccCCCC---CCCCCCcCCCCccchhhhhccCcccCCCCCCcE
Q 005501 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPK--CILDRTDK---SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (693)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~--~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (693)
.+|+.+++++++++..||..+.+.+ .|.+++. ++++.... .....+||.++.+|.++++++++. ++.+|+++
T Consensus 30 ~~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~-~~~~~~~~ 106 (666)
T PLN02654 30 QQYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNICYNCLDRNV-EAGNGDKI 106 (666)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCCcccCCccccccCCCEeeHHHHHHHHhh-ccCCCCCE
Confidence 3578999999999999999999985 4666653 55532111 123579999999999999998864 12589999
Q ss_pred EEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 005501 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (693)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l 272 (693)
|+++.+. +.+..+++||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++
T Consensus 107 Al~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l 184 (666)
T PLN02654 107 AIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESL 184 (666)
T ss_pred EEEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 9998543 123346899999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC---------CceEEEcCCCC--CCCCC-CCCCcccHHHHhcccC
Q 005501 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---------LKAIVLPAIGN--DVGIP-LREQDLSWKDFLSSVD 340 (693)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~ 340 (693)
.+++++++|+++|+++.+.+..+.......+.+... ..++....... ..... .......|+++.....
T Consensus 185 ~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (666)
T PLN02654 185 AQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP 264 (666)
T ss_pred HHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC
Confidence 999999999999999887666655544333322111 01111111100 00000 0112334555543211
Q ss_pred CCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHH-HHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHH
Q 005501 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (693)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (693)
...+.....++|++||+|||||||+||||+++|++++. ........++++++|++++.++++|.++. +.++.+
T Consensus 265 -----~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 339 (666)
T PLN02654 265 -----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGP 339 (666)
T ss_pred -----CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHH
Confidence 11122335679999999999999999999999999754 44445567889999999999999999987 568899
Q ss_pred HHcCCEEEEecCC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHh
Q 005501 419 FLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (693)
Q Consensus 419 L~~G~~lvi~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~ 493 (693)
|+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....++++||.++++||+++++..+++.+
T Consensus 340 L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 419 (666)
T PLN02654 340 MLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFN 419 (666)
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHH
Confidence 9999999999753 467899999999999999999999999987643 23457889999999999999999999988
Q ss_pred hCCC--CceecccccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEecccCCCccccc
Q 005501 494 KAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLL 570 (693)
Q Consensus 494 ~~~~--~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~ 570 (693)
.++. +++.+.||+||+++..+...+. .+...+++|+|++|++++|+|++|++++.|+ +|||++..++.+...+|+
T Consensus 420 ~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~--~Gel~v~~~~p~~~~gy~ 497 (666)
T PLN02654 420 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGEC--SGYLCVKKSWPGAFRTLY 497 (666)
T ss_pred HhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCC--ceEEEEcCCCchhhhhhc
Confidence 8753 6899999999998755443331 2445678999999999999999999999887 499999432222222222
Q ss_pred -ccccccccc-cccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecC
Q 005501 571 -NADHEEVYF-RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (693)
Q Consensus 571 -~~~~t~~~f-~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~ 648 (693)
+++.+.+.| ... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|+++++
T Consensus 498 ~~~~~~~~~~~~~~---~g--~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d 571 (666)
T PLN02654 498 GDHERYETTYFKPF---AG--YYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEH 571 (666)
T ss_pred CChHHHHHhhhhcC---CC--EEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEc
Confidence 333444333 221 23 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCCh---HHHHHHHHHHHHhhcCCCceec
Q 005501 649 AGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+..| +.+++||+++++...+. ++|+++++++|+.|++|..+++
T Consensus 572 ~~~g-e~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~ 617 (666)
T PLN02654 572 EVKG-QGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHW 617 (666)
T ss_pred CCCC-eEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEE
Confidence 8888 99999999998765553 3688888999999999998765
No 13
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.5e-73 Score=650.46 Aligned_cols=549 Identities=22% Similarity=0.346 Sum_probs=436.1
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEEec
Q 005501 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWRE 199 (693)
Q Consensus 120 ~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~ 199 (693)
+|+.+++++++++..||..+++. +.|.+++.++++.. ..+..+||.++.+|.+.++++++. +.+|+++|+++.+
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~~ 75 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYS--NPPFARWFAGGRTNLCHNALDRHL--DERGEQLALVTVS 75 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCC--CCCcCccCCCCEeeHHHHHHHHHh--CcCCCCeEEEEEc
Confidence 46888999999999999999997 47899999987542 235679999999999999998754 6789999999853
Q ss_pred CCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHh
Q 005501 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278 (693)
Q Consensus 200 ~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~ 278 (693)
. +++..+++||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++
T Consensus 76 ~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~ 153 (628)
T TIGR02316 76 S--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDD 153 (628)
T ss_pred C--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHh
Confidence 2 123345899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEeecceeeCCccccchhhHhh---c---CCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCcc
Q 005501 279 SKAKGIFTQDFILRGGRKFPLYSKVLG---A---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (693)
Q Consensus 279 ~~~~~il~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (693)
++++++|+++...+.++.++....+.+ . ....+++++...... ........+|.++...... ...+...
T Consensus 154 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~ 228 (628)
T TIGR02316 154 ATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM-RLIPGRDVDYAALRTQHED----AQVPVEW 228 (628)
T ss_pred cCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCccccHHHHhhcccc----CCCCcee
Confidence 999999998876655555544333322 1 123444444221110 0111123456665543211 1112223
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHH-HHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEecC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~ 430 (693)
..+++++||+|||||||+||||+++|++++ +........++++++|++++.++++|+++. +.++.+|+.|++++++++
T Consensus 229 ~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~ 308 (628)
T TIGR02316 229 LESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEG 308 (628)
T ss_pred cCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCC
Confidence 467999999999999999999999999975 444455566889999999999999999996 678899999999999875
Q ss_pred C---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccc
Q 005501 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (693)
Q Consensus 431 ~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (693)
. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++...+ +..++|.||
T Consensus 309 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG 387 (628)
T TIGR02316 309 LPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYW 387 (628)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEeccc
Confidence 3 367889999999999999999999999987642 2345689999999999999999999888765 578999999
Q ss_pred cccccceeccCCcC---CCCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEEe-c---ccCCCcccccc-ccccc
Q 005501 506 GTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLF-P---LYLGASDRLLN-ADHEE 576 (693)
Q Consensus 506 ~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v~-~---gy~~~~~~~~~-~~~t~ 576 (693)
+||++..++..... .....+++|+|++|++++|+|+ +|+++|.|+. |||++. | ||+. +|++ ++.+.
T Consensus 388 ~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~--Gel~v~gp~~~g~~~---~~~~~~~~~~ 462 (628)
T TIGR02316 388 QTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEK--GVLTVVPPLPPGCLS---TVWGDDARFL 462 (628)
T ss_pred ccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCc--EEEEEecCCCccccc---cccCChHHHH
Confidence 99998544333221 2234578899999999999998 7999999985 999993 3 3432 2222 22222
Q ss_pred ccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEE
Q 005501 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (693)
Q Consensus 577 ~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l 656 (693)
..|.. ..+++||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.+
T Consensus 463 ~~~~~---~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~~ 537 (628)
T TIGR02316 463 KTYWS---HFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QVA 537 (628)
T ss_pred Hhhhh---cCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eEE
Confidence 22211 113459999999999999999999999999999999999999999996 9999999999999998888 999
Q ss_pred EEEEEecCCCCC--------ChHHHHHHHHHHHHhhcCCCceec
Q 005501 657 VIFVVLKKGFTS--------QPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 657 ~a~vv~~~~~~~--------~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++||+++++... ..++|+++++++|+.|++|..++.
T Consensus 538 ~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~ 581 (628)
T TIGR02316 538 VVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYF 581 (628)
T ss_pred EEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEE
Confidence 999998875432 236799999999999999998765
No 14
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.8e-73 Score=649.57 Aligned_cols=579 Identities=27% Similarity=0.412 Sum_probs=453.6
Q ss_pred cccCCcccccccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCC
Q 005501 85 YWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHG 164 (693)
Q Consensus 85 ~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 164 (693)
.|.|.++....++|..+....... |+..+.+|+.++++++++...||..+++...+.+.++++.+++.. ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~~ 77 (655)
T PRK03584 5 LWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGR--RMPG 77 (655)
T ss_pred CCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCC--CCCC
Confidence 677766656677777665443321 333446789999999999999999999887678888888886542 2345
Q ss_pred CCcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC
Q 005501 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243 (693)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s 243 (693)
.+||.++.+|++++++++ .+|+++|+++.+. .+..+++||+||.++++++|++|++. +++||+|+|+++|+
T Consensus 78 ~~wf~~~~~n~~~~~~~~-----~~~~~~Al~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~ 149 (655)
T PRK03584 78 ARWFPGARLNYAENLLRH-----RRDDRPAIIFRGE---DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNI 149 (655)
T ss_pred CeeCCCCEeeHHHHhhcc-----CCCCCeEEEEECC---CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC
Confidence 799999999999999863 4699999998754 13456899999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHh---hcCCC--ceEEEcCCC
Q 005501 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAAPL--KAIVLPAIG 318 (693)
Q Consensus 244 ~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~ 318 (693)
+++++++|||+++|++++|++|.++.+++.+++++++++++|+++......+..+....+. ...+. .+++++...
T Consensus 150 ~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 229 (655)
T PRK03584 150 PETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLG 229 (655)
T ss_pred HHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCC
Confidence 9999999999999999999999999999999999999999999987665555544443332 22222 344443222
Q ss_pred CCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHH-HHHHHhchhcCCCCC
Q 005501 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKVG 397 (693)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~ 397 (693)
.............|+++...... .........+++++||+|||||||+||||+++|++++ +.+......++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~ 305 (655)
T PRK03584 230 PAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPG 305 (655)
T ss_pred CcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCC
Confidence 11111112234567777652211 1122234567999999999999999999999999875 455566667889999
Q ss_pred CEEEEeCCccccchhHHHHHHHHcCCEEEEecCC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCcc
Q 005501 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTK 472 (693)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~ 472 (693)
|+++++++++|+++. .++.+|+.|++++++++. +++..++++++++++|++.++|++++.+.+... ....++++
T Consensus 306 d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~s 384 (655)
T PRK03584 306 DRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSA 384 (655)
T ss_pred CEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhh
Confidence 999999999998654 366899999999998753 467899999999999999999999999986532 23457889
Q ss_pred ccEEEeecCCCCcchHHHHHhhCC-CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCC
Q 005501 473 IRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQP 551 (693)
Q Consensus 473 lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~ 551 (693)
||.+++|||++++++.+++.+.++ +..+.+.||+||++..+....+..+...+++|.|++|++++|+|++|+++ .|+
T Consensus 385 Lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~- 462 (655)
T PRK03584 385 LRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGE- 462 (655)
T ss_pred eEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-CCC-
Confidence 999999999999999999988773 67899999999987654443333445567899999999999999999999 677
Q ss_pred ceeeEEEecccCCCccccccc-ccc---cccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 552 CVGEVGLFPLYLGASDRLLNA-DHE---EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 552 giGel~v~~gy~~~~~~~~~~-~~t---~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
+|||+|...+.+...+|++. +.+ ..+|... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.||
T Consensus 463 -~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~---~g--~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EI 536 (655)
T PRK03584 463 -VGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTF---PG--VWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEI 536 (655)
T ss_pred -ceEEEEccCCCCCcceeeCCCccchHHHhhhccC---CC--EeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHH
Confidence 49999942111112222222 221 2233221 23 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCCh---HHHHHHHHHHHHhhcCCCceecC
Q 005501 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
|++|. +||+|.+|+|++++++..+ +.+++||+++++...+. ++|+++++++|+.|++|.+++.+
T Consensus 537 E~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v 603 (655)
T PRK03584 537 YRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAV 603 (655)
T ss_pred HHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEEC
Confidence 99996 9999999999999998777 99999999988755553 57999999999999999988753
No 15
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=5.7e-73 Score=648.39 Aligned_cols=554 Identities=25% Similarity=0.397 Sum_probs=442.2
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEE
Q 005501 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (693)
Q Consensus 118 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~ 197 (693)
+.+|+.+++++++++..||..+.+. ...+.+++.++++.. .....+||.++.+|.+++++++++ +.+|+++|+++
T Consensus 4 ~~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~ 78 (625)
T TIGR02188 4 LEQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWS--FPPFYKWFVGGELNVSYNCVDRHL--EARPDKVAIIW 78 (625)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCC--CCCCCeeCCCCEEEHHHHHHHHhh--ccCCCCeEEEE
Confidence 3467899999999999999999987 457899999887653 234689999999999999998754 67999999998
Q ss_pred ecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHH
Q 005501 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (693)
Q Consensus 198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l 276 (693)
.++ +.+..+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.+++
T Consensus 79 ~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l 156 (625)
T TIGR02188 79 EGD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRI 156 (625)
T ss_pred EcC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHH
Confidence 654 223456899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCeeEEEeecceeeCCccccchhhHhh---cCC---CceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCC
Q 005501 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP---LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350 (693)
Q Consensus 277 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (693)
++++++++|+++...+.++..+....+.+ ..+ ..++++........ ........|+++...... ....
T Consensus 157 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~ 230 (625)
T TIGR02188 157 NDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-WVEGRDVWWHDLMAKASA-----YCEP 230 (625)
T ss_pred HhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-ccccccccHHHHHhhcCC-----CCCc
Confidence 99999999999877666655544333322 222 12333332221110 011123456666543221 1223
Q ss_pred ccCCCCCeEEEEeccCCCCCcceEEecchhHHHHH-HHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEe
Q 005501 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (693)
Q Consensus 351 ~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~ 428 (693)
....+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|.++. +.++.+|+.|++++++
T Consensus 231 ~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~ 310 (625)
T TIGR02188 231 EPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMF 310 (625)
T ss_pred eecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEE
Confidence 34567999999999999999999999999975433 334456788999999999999999886 6688999999999998
Q ss_pred cCC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCC--CCcee
Q 005501 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAII 501 (693)
Q Consensus 429 ~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~ 501 (693)
++. +++..+++.|+++++|++.++|++++.|.+.... ...++++||.+++|||++++++.+++.+.++ +++++
T Consensus 311 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~ 390 (625)
T TIGR02188 311 EGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIV 390 (625)
T ss_pred CCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceE
Confidence 753 3678999999999999999999999999876432 3356889999999999999999999988765 37899
Q ss_pred cccccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCC-CCCCceeeEEEecccCCCcccccc-ccccccc
Q 005501 502 ESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGLFPLYLGASDRLLN-ADHEEVY 578 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p-~G~~giGel~v~~gy~~~~~~~~~-~~~t~~~ 578 (693)
|.||+||+++.++...+. .+...+++|+|++|++++|+|++|++++ .|+ .|||++...+.+...+|++ ++.+.+.
T Consensus 391 ~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~--~GeL~v~~p~p~~~~gy~~~~~~~~~~ 468 (625)
T TIGR02188 391 DTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGE--GGYLVIKQPWPGMLRTIYGDHERFVDT 468 (625)
T ss_pred ecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCC--eEEEEEccCCCcccccccCChHHHHHH
Confidence 999999998765443322 2345678999999999999999999999 888 4999984322222222333 3333333
Q ss_pred ccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEE
Q 005501 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (693)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a 658 (693)
|.. ..+| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.++|
T Consensus 469 ~~~--~~~g--~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~~a 542 (625)
T TIGR02188 469 YFS--PFPG--YYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAIYA 542 (625)
T ss_pred Hhc--cCCC--EEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEE
Confidence 321 1123 9999999999999999999999999999999999999999996 9999999999999998887 99999
Q ss_pred EEEecCCCCCC---hHHHHHHHHHHHHhhcCCCceec
Q 005501 659 FVVLKKGFTSQ---PDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 659 ~vv~~~~~~~~---~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
||+++++...+ .++|+++++++|+.+++|..++.
T Consensus 543 ~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 579 (625)
T TIGR02188 543 FVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRF 579 (625)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEE
Confidence 99998876544 26799999999999999998765
No 16
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.6e-72 Score=644.74 Aligned_cols=579 Identities=26% Similarity=0.374 Sum_probs=452.2
Q ss_pred ccccCCcccccccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCC
Q 005501 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (693)
Q Consensus 84 ~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 163 (693)
..|.|.......++|..+.+..+.. |...+.+|+.+++++++++..||..+++...+.+.++++++++... ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~--~~ 77 (652)
T TIGR01217 5 PLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDRT--MP 77 (652)
T ss_pred CCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCCC--CC
Confidence 4787776666677777665554322 3444567899999999999999999999987899999999986522 34
Q ss_pred CCCcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 005501 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (693)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~ 242 (693)
...||.++.+|.++++++. .++++|+++.+.. +..+++||+||.++++++|+.|+++ +++||+|+++++|
T Consensus 78 ~~~wf~~~~~n~~~~~~~~------~~~~~a~~~~~~~---~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n 148 (652)
T TIGR01217 78 GAQWFPGARLNYAENLLRA------AGTEPALLYVDET---HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPN 148 (652)
T ss_pred CCEECCCCeeeHHHHHhcc------CCCCeEEEEECCC---CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5789999999999999862 3689999987542 3456899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhh---cCC--CceEEEcCC
Q 005501 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP--LKAIVLPAI 317 (693)
Q Consensus 243 s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~ 317 (693)
++++++++|||+++|++++|++|.++.+++.+++++++|+++|+++.+.++++..+....+.+ ..+ ..+++++..
T Consensus 149 ~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (652)
T TIGR01217 149 IPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYL 228 (652)
T ss_pred CHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCC
Confidence 999999999999999999999999999999999999999999999887766666555444332 222 224444322
Q ss_pred CCC-CCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHH-HHHHHhchhcCCC
Q 005501 318 GND-VGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLK 395 (693)
Q Consensus 318 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~-~~~~~~~~~~~~~ 395 (693)
... .......+...|+++...... .........++++++|+|||||||+||||+++|++++ +........++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~ 304 (652)
T TIGR01217 229 GPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLG 304 (652)
T ss_pred CCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCC
Confidence 110 000001134567777543211 1111233456899999999999999999999999864 4455555668899
Q ss_pred CCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCC
Q 005501 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDW 470 (693)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l 470 (693)
++|+++++++++|+++.+ ++.+|+.|++++++++. +++..++++++++++|++.++|++++.+..... ....++
T Consensus 305 ~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l 383 (652)
T TIGR01217 305 PGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDL 383 (652)
T ss_pred CCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCCh
Confidence 999999999999987544 55899999999999753 367789999999999999999998888765422 234678
Q ss_pred ccccEEEeecCCCCcchHHHHHhhCC-CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCC
Q 005501 471 TKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDD 549 (693)
Q Consensus 471 ~~lr~v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G 549 (693)
++||.+++|||++++++.+++.+.++ +..+.+.||+||+++++....+..+...+++|.|.+|++++|+|++|++++ |
T Consensus 384 ~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~-g 462 (652)
T TIGR01217 384 SALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVT-G 462 (652)
T ss_pred hheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCC-C
Confidence 99999999999999999999887764 356789999999865444333334445678999999999999999999995 7
Q ss_pred CCceeeEEEecccCCCccccccc-ccc---cccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehH
Q 005501 550 QPCVGEVGLFPLYLGASDRLLNA-DHE---EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 625 (693)
Q Consensus 550 ~~giGel~v~~gy~~~~~~~~~~-~~t---~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~ 625 (693)
+ .|||++...+.+.+.+|++. +.+ +.+|.. ..+||+|||+|++|+||+|+|+||+||+||++|+||+|.
T Consensus 463 ~--~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~-----~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~ 535 (652)
T TIGR01217 463 E--VGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDT-----YPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSA 535 (652)
T ss_pred C--ccEEEEecCCCccccceeCCCccchhHHhhhcC-----CCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHH
Confidence 7 49999942221222223332 222 133332 123899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCCh---HHHHHHHHHHHHhhcCCCceecC
Q 005501 626 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 626 eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
|||++|. +||+|.+|+|++++++.+| +.++|||+++++...+. ++|+++|+++|+.|++|..++++
T Consensus 536 EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v 604 (652)
T TIGR01217 536 EIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEV 604 (652)
T ss_pred HHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEEC
Confidence 9999996 9999999999999998887 99999999998765553 47999999999999999987753
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.6e-72 Score=640.65 Aligned_cols=552 Identities=26% Similarity=0.380 Sum_probs=435.1
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEEe
Q 005501 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (693)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (693)
.+|..+.+++++++..||..+.+. ..+.+++.++++. .....+|+.++.+|.++++++++. +++|+++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~---~~~~~~w~~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 89 (637)
T PRK00174 17 EQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW---NAPFIKWFEDGELNVSYNCLDRHL--KTRGDKVAIIWE 89 (637)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC---CCCCCccCCCCEeEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 456888899999999999999877 4677888887654 345689999999999999998754 678999999986
Q ss_pred cCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 005501 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (693)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~ 277 (693)
+. +.+..+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 90 ~~--~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~ 167 (637)
T PRK00174 90 GD--DPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRII 167 (637)
T ss_pred CC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHH
Confidence 53 112346899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEeecceeeCCccccchhhHhh---cCC--CceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCcc
Q 005501 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (693)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (693)
+++++++|+++......+..+....+.+ ..+ ..++++........ ........|+++...... ......
T Consensus 168 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~ 241 (637)
T PRK00174 168 DAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-WVEGRDLWWHELVAGASD-----ECEPEP 241 (637)
T ss_pred hcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-cCCCCcccHHHHHhhcCC-----CCCccc
Confidence 9999999998876544444433333222 122 12333332211110 011123456666543221 122234
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHHHHH-HHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEecC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~ 430 (693)
..+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|..+. +.++.+|++|++++++++
T Consensus 242 ~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 321 (637)
T PRK00174 242 MDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEG 321 (637)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECC
Confidence 567899999999999999999999999976543 334455788999999999999999887 578899999999999874
Q ss_pred C---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCC--CCceecc
Q 005501 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIES 503 (693)
Q Consensus 431 ~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~n~ 503 (693)
. +++..+++.|+++++|++.++|++++.|++.... ...++++||.+++|||++++++.+++.+.++ .++++|.
T Consensus 322 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 401 (637)
T PRK00174 322 VPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDT 401 (637)
T ss_pred CCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEec
Confidence 3 3678999999999999999999999999876432 2356789999999999999999998887764 3789999
Q ss_pred cccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEecccCCCccccc-ccccccccccc
Q 005501 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLL-NADHEEVYFRG 581 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~-~~~~t~~~f~~ 581 (693)
||+||++...+...+. .....+++|+|++|++++|+|++|+++|.|+. |||++...+.+...+|+ +++.+.+.|
T Consensus 402 YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~p~~~~gy~~~~~~~~~~~-- 477 (637)
T PRK00174 402 WWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEG--GNLVIKDPWPGMMRTIYGDHERFVKTY-- 477 (637)
T ss_pred ccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCc--EEEEEcCCCCcccccccCCHHHHHHhh--
Confidence 9999998755433221 22345789999999999999999999999985 99998421111111222 233333222
Q ss_pred cccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEE
Q 005501 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVV 661 (693)
Q Consensus 582 ~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv 661 (693)
+....+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.++|||+
T Consensus 478 --~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a~vv 553 (637)
T PRK00174 478 --FSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYAFVT 553 (637)
T ss_pred --hcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEE
Confidence 1112349999999999999999999999999999999999999999996 9999999999999998887 99999999
Q ss_pred ecCCCCCC---hHHHHHHHHHHHHhhcCCCceecC
Q 005501 662 LKKGFTSQ---PDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 662 ~~~~~~~~---~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
+.++...+ .++|+++|+++|+.|+.|..++.+
T Consensus 554 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v 588 (637)
T PRK00174 554 LKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFA 588 (637)
T ss_pred ECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEc
Confidence 98875544 468999999999999999988754
No 18
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-71 Score=635.78 Aligned_cols=549 Identities=20% Similarity=0.317 Sum_probs=434.3
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcEEEEEe
Q 005501 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (693)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (693)
.+|+.+++++++++..||..+.+. ..|.++++++++.. ..+..+||.++.+|.+.++++++. +.+|+++|+++.
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~A~~~~ 75 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYS--NPPFARWFVGGRTNLCHNAVDRHL--AKRPEQLALIAV 75 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCC--CCCcCccCCCcEeeHHHHHHHHhh--ccCCCCeEEEEE
Confidence 468999999999999999999996 47899999987542 234578999999999999998754 678999999985
Q ss_pred cCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 005501 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (693)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~ 277 (693)
+. +++..+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 76 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 76 ST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred cC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 42 122346899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeeEEEeecceeeCCccccchhhHh---hc---CCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCc
Q 005501 278 VSKAKGIFTQDFILRGGRKFPLYSKVL---GA---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (693)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (693)
+++++++|+++...+.++..+....+. +. ....++++....... .........|.++...... ...+..
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~ 228 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-ARVAGRDVDYATLRAQHLG----ARVPVE 228 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCCcccHHHHHhcCCC----CCCCce
Confidence 999999999887665555544333322 21 122344443211110 0111223456665443221 111122
Q ss_pred cCCCCCeEEEEeccCCCCCcceEEecchhHHH-HHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEec
Q 005501 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (693)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~ 429 (693)
...+++++||+|||||||+||||+++|++++. ........++++++|++++.++++|+++. +.++.+|+.|+++++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 34578999999999999999999999999754 33334456788999999999999999886 67889999999999987
Q ss_pred CC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 430 ~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.+ +++++|.|
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 387 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNY 387 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEecc
Confidence 53 367889999999999999999999999887542 2345688999999999999999999988776 57899999
Q ss_pred ccccccceeccCCc---CCCCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEEe-c---ccCCCccccc-ccccc
Q 005501 505 GGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLF-P---LYLGASDRLL-NADHE 575 (693)
Q Consensus 505 G~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v~-~---gy~~~~~~~~-~~~~t 575 (693)
|+||++..++.... ......+++|+|++|++++|+|+ +|+++|.|+. |||++. + +|+.+ |+ +++.+
T Consensus 388 G~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~--Gel~i~gp~~~~~~~~---~~~~~~~~ 462 (629)
T PRK10524 388 WQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK--GVLVIEGPLPPGCMQT---VWGDDDRF 462 (629)
T ss_pred ccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc--EEEEEcCCCChhhcCC---ccCChHHH
Confidence 99999843332222 12334578999999999999998 9999999985 999993 2 34332 22 22222
Q ss_pred c-ccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 576 E-VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 576 ~-~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
. .+|... +.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +
T Consensus 463 ~~~~~~~~----~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~ 536 (629)
T PRK10524 463 VKTYWSLF----GRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-Q 536 (629)
T ss_pred HHhhhccC----CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-e
Confidence 2 222211 3459999999999999999999999999999999999999999996 9999999999999998877 9
Q ss_pred EEEEEEEecCCCCCC--------hHHHHHHHHHHHHhhcCCCceec
Q 005501 655 VLVIFVVLKKGFTSQ--------PDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 655 ~l~a~vv~~~~~~~~--------~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+++||+++++...+ .++|+++++++|+.|+.|..++.
T Consensus 537 ~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~ 582 (629)
T PRK10524 537 VAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWF 582 (629)
T ss_pred EEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEE
Confidence 999999998754332 35789999999999999988865
No 19
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2e-70 Score=591.27 Aligned_cols=472 Identities=26% Similarity=0.284 Sum_probs=400.1
Q ss_pred CCCCc-EEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh---cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 188 KEDNT-VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM---FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 188 ~~pd~-~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~---v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
..+++ +++++.... .+.+||+|+.+++.|+|.+|.++ +++||+|++++||+++++.++|||+.+|+++.|+
T Consensus 28 ~~~~~~~~~i~~~~~-----g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDSD-----GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred ccccCcceEEEecCC-----CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 33444 777777630 12999999999999999999975 7889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCccc-HHHHhcccCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYH 342 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 342 (693)
+|.+.+.++...+++++++++|++.... +...........+++++................+ +.++......
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP- 175 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-
Confidence 9999999999999999999999998643 3333333333455555544311111111111112 3333322221
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcC
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (693)
. . ......+|++.|+|||||||.||||++||+++............+...|+.++..|++|..|++.++.+++.|
T Consensus 176 ---~-~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 176 ---D-G-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred ---c-c-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 1 1 3456679999999999999999999999999988877666677778899999999999999999988888888
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceec
Q 005501 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (693)
++.++....++++.+++.|++|+||++.++|.++..|++.......+++++|.+.+||.++++++.+.++++++...+.+
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q 330 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ 330 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEE
Confidence 88777777789999999999999999999999999999987667788999999999999999999999999998789999
Q ss_pred ccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
+||+||+++..+.+........+++|+++++++..|.++.|+.+++++. ||||+ ..||++ |++.|++
T Consensus 331 ~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~--GEI~vrg~~imkGY~~------NpeaT~~ 402 (537)
T KOG1176|consen 331 GYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQT--GEICVRGPQVMKGYLK------NPEATKE 402 (537)
T ss_pred eeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCc--eEEEEECcccchhhcC------ChHHHHh
Confidence 9999999976655544333578899999999999999999999999995 99998 578888 7778998
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.|..+ .||+|||+|++|+||+|++.+|++|+||.+|+.|+|.|||++|. .||.|.||||++++|+..| +.++
T Consensus 403 ~~~~~------GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~ 474 (537)
T KOG1176|consen 403 AFDDD------GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPA 474 (537)
T ss_pred hcccC------CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-Ccce
Confidence 88753 39999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
||||.++|..++++++.++++++|+.|+.|..+++
T Consensus 475 A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~F 509 (537)
T KOG1176|consen 475 AFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVF 509 (537)
T ss_pred EEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEE
Confidence 99999999899999999999999999999987765
No 20
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-69 Score=579.28 Aligned_cols=560 Identities=31% Similarity=0.451 Sum_probs=464.2
Q ss_pred cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceeeccCCCCCCCCCCcCCCCccchhhhhccCcccCCCCCCcE
Q 005501 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (693)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (693)
|...+.+|..|++.++++.+.||...++.+....... .............+|+.+..+|.+++|++++.... .++.+
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~-~~~~~ 82 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKFPWP--RCNKDENKGNPFTKWFPGAFLNACYNCLDRHIKEK-GGDKV 82 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhcccCcc--ccccccccCCCCccccccchhhhhHhhhhhhhhhc-CCCCc
Confidence 5667778999999999999999999999874332222 22222334567789999999999999999976455 79999
Q ss_pred EEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 005501 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (693)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l 272 (693)
|+++.+.. ++....+||.||.+++.++|..|.+. +++||+|++++|+.+++++++|||.++|++.+++-..+++..+
T Consensus 83 a~~~~~~~--~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l 160 (626)
T KOG1175|consen 83 AIIFEGNE--GGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKEL 160 (626)
T ss_pred EEEEEecC--CCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHH
Confidence 99998653 23333499999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCcc
Q 005501 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (693)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (693)
...++++++++|++.+...+..+.+.....+.+................-......+..|+++...... ..++..
T Consensus 161 ~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~ 235 (626)
T KOG1175|consen 161 LDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVP 235 (626)
T ss_pred HHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCcee
Confidence 999999999999999999999988887776666543322111110000001111235677777665543 223667
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchh-HHHHHHHhchhcCCCCCCEEEEeCCccccchhH-HHHHHHHcCCEEEEecC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATLALYQG 430 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~lvi~~~ 430 (693)
.+.+|+.+|+|||||||.|||+.+++.+ ++..+.....+++++++|++.+++.++|+++.+ ..+++|++|++++++++
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g 315 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEG 315 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcC
Confidence 7889999999999999999999999987 466666777789999999999999999999985 47789999999999987
Q ss_pred CC-ChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccc
Q 005501 431 SP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (693)
Q Consensus 431 ~~-~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (693)
.+ ++..+++.+.+++||++++.|+.++.|.+.... ..++.++||.+.++||++.++..+|+.+.+...+|++.||+|
T Consensus 316 ~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 316 PPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred CCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 76 889999999999999999999999988876543 334447799999999999999999999887544799999999
Q ss_pred cccceeccCCcCC-CCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEecccC-CCccccccc-c-cccccccccc
Q 005501 508 ELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYL-GASDRLLNA-D-HEEVYFRGMP 583 (693)
Q Consensus 508 E~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~-~~~~~~~~~-~-~t~~~f~~~p 583 (693)
|+|+.++.+.... +..+++.|+|.+|+.+.|+|++|++++.+. |.|+|++.+... +.+..++++ + ....||.+.|
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 9999888877766 888999999999999999999999999875 579999955444 433344333 2 3344555433
Q ss_pred cCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEec
Q 005501 584 MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (693)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~ 663 (693)
| +|+|||.+++|+||+++++||.||+|+++|+||++.|||++|. .||.|.|++||+.+++..| +.++|||+++
T Consensus 475 ---g--~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFvvl~ 547 (626)
T KOG1175|consen 475 ---G--YYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFVVLK 547 (626)
T ss_pred ---c--eEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEEEEc
Confidence 3 9999999999999999999999999999999999999999996 9999999999999999988 9999999999
Q ss_pred CCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 664 KGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 664 ~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++. .+.++|++.|+.+++..+.|.+.+.
T Consensus 548 ~g~-~~~~~L~kel~~~VR~~igp~a~P~ 575 (626)
T KOG1175|consen 548 SGS-HDPEQLTKELVKHVRSVIGPYAVPR 575 (626)
T ss_pred CCC-CChHHHHHHHHHHHHhhcCcccccc
Confidence 984 4558999999999999998888763
No 21
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-67 Score=527.93 Aligned_cols=481 Identities=19% Similarity=0.222 Sum_probs=399.8
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
+++.||+.|+++...+ .++||+|+.+.++++|+.|..+ +++||||+|..||+.+|+..+|||.++|.+.+++|
T Consensus 60 t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~N 133 (596)
T KOG1177|consen 60 TERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLN 133 (596)
T ss_pred hhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccC
Confidence 3678999999987663 3799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCC---ccccchhhHhhc---------CCCceEEEcCCCCCCCCCCCCCcccH
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGG---RKFPLYSKVLGA---------APLKAIVLPAIGNDVGIPLREQDLSW 332 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (693)
|.|+.+++++.|+..+++++|+...+.... -..+...++... ++....++-..++ ..-.+...+
T Consensus 134 P~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed----~~~~Ga~~~ 209 (596)
T KOG1177|consen 134 PAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED----HPLPGAFLL 209 (596)
T ss_pred cccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC----CcCCCceeh
Confidence 999999999999999999999987542110 000111111111 1222222221111 112356677
Q ss_pred HHHhcccCCCCCC-CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccch
Q 005501 333 KDFLSSVDYHPRP-NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411 (693)
Q Consensus 333 ~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (693)
+|++......... ...-.....|||++.|.|||||||.|||+.+||-+++|+......++++...++++...|+.|.++
T Consensus 210 sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G 289 (596)
T KOG1177|consen 210 SEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFG 289 (596)
T ss_pred HHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHH
Confidence 8877665431111 011123456899999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHH
Q 005501 412 P-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLW 490 (693)
Q Consensus 412 ~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~ 490 (693)
. ..++.+|+.|+|+|+++..+++.+.++.|.++++|.++.+|+++..|++.......+++++|..+.||+++|+++.+.
T Consensus 290 ~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~ 369 (596)
T KOG1177|consen 290 CVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKL 369 (596)
T ss_pred HHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHH
Confidence 5 778999999999999999999999999999999999999999999999988888889999999999999999999988
Q ss_pred HHhhCCCCceecccccccccceeccCCcCC--CCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccC
Q 005501 491 LSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYL 563 (693)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~ 563 (693)
+.....=..+...||+||++...+.....+ .+...++|+.+++.+..|+|.+|.++|.|++ |||++ +.||+
T Consensus 370 iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tMl~Yw 447 (596)
T KOG1177|consen 370 IVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIRGYSTMLGYW 447 (596)
T ss_pred HHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCC--ceEEEEechhheeec
Confidence 876543234788999999997555444322 2345689999999999999999999999997 99998 45667
Q ss_pred CCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEE
Q 005501 564 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (693)
Q Consensus 564 ~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~V 643 (693)
+ +++.|.+.. ..+|||+|||.+++|++|+++++||+||+|+.+|++|+|.|||..|. +||.|.++.|
T Consensus 448 g------~~~kT~eti------~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~-~hp~V~~a~V 514 (596)
T KOG1177|consen 448 G------EEEKTKETI------GNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLN-KHPLVKEAHV 514 (596)
T ss_pred C------Ccccchhhc------ccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHh-hCCCeeeEEE
Confidence 6 333454433 34679999999999999999999999999999999999999999996 9999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCCC--CChHHHHHHHHHHHHhhcCCCceec
Q 005501 644 ISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~--~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+++|+..| +.+||+|-++.+.. .+.++|+.+|+.+|..+.+|.++++
T Consensus 515 VGV~D~R~G-E~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf 564 (596)
T KOG1177|consen 515 VGVPDERLG-EEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVF 564 (596)
T ss_pred EccCCCccc-ceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEE
Confidence 999999999 99999999998764 5889999999999999999999875
No 22
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-66 Score=578.41 Aligned_cols=468 Identities=24% Similarity=0.272 Sum_probs=386.5
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+... ++||+||.++++++|++|++. |++||+|+|+++|+++++++++||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~~~------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 21 ARRNPDRPALIFLGRGG------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred HHhCCCceEEEEcCCCc------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecC
Confidence 46899999999988720 399999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCc-ccHHHHhcccCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYHP 343 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (693)
|.+..+++.++++++++++++++..+. +....+....+....+....... ... ..+++.......
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 160 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDAD------DRLPITLEALAAEGPG-- 160 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEeccccc------ccccccHHHHhhccCC--
Confidence 999999999999999999999997521 12222222222211111111100 000 245555332211
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC--CCCCCEEEEeCCccccchhHH-HHHHHH
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPVI-LFSSFL 420 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~-~~~~L~ 420 (693)
.........++|+|+|+|||||||.||||++||+++..+.......++ ++++|+++..+|++|++++.. ++.+++
T Consensus 161 --~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~ 238 (534)
T COG0318 161 --PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLL 238 (534)
T ss_pred --cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHH
Confidence 111111257899999999999999999999999999988888878888 899999999999999999965 445588
Q ss_pred cCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCcc-ccEEEeecCCCCcchHHHHHhhCCCC
Q 005501 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWYN 498 (693)
Q Consensus 421 ~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~-lr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (693)
.|+++++.++ .+++..++..+.++++|++.++|+++..|+........++.+ ||.+++||+++++++.+.+.++++..
T Consensus 239 ~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 318 (534)
T COG0318 239 GGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPI 318 (534)
T ss_pred cCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCC
Confidence 9999998875 578889999999999999999999999999886665555565 99999999999999999999998766
Q ss_pred ceecccccccccceeccCCcCC-CCccCccCCCCCCceEEEECCCCC-CCCCCCCceeeEEE-----ecccCCCcccccc
Q 005501 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV-PYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (693)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~ild~~~~-~~p~G~~giGel~v-----~~gy~~~~~~~~~ 571 (693)
++++.||+||++..++...... ....+.+|+|+||++++|+|+++. ++| |. +|||++ ..||++ +
T Consensus 319 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~--vGei~irgp~v~~GY~~------~ 389 (534)
T COG0318 319 AILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GE--VGEIWVRGPNVMKGYWN------R 389 (534)
T ss_pred ceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CC--ceEEEEECchhhhhhcC------C
Confidence 8999999999997666655544 235667799999999999997765 666 77 599998 567777 4
Q ss_pred cccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCC
Q 005501 572 ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG 651 (693)
Q Consensus 572 ~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~ 651 (693)
++.|++.|.. ++||+|||+|++|+||+++|.||.+|+||++|++|+|.|||.+|. +||+|.+|+|++++++..
T Consensus 390 pe~t~~~f~~------~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~-~~~~V~~aavvgvpd~~~ 462 (534)
T COG0318 390 PEATAEAFDE------DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLA-EHPAVAEAAVVGVPDERW 462 (534)
T ss_pred hHHHHHhhcc------CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHH-hCCCcceEEEEeCCCCcc
Confidence 4577766654 349999999999999999999999999999999999999999995 999999999999999999
Q ss_pred CceEEEEEEEecCC--CCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 652 GPEVLVIFVVLKKG--FTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 652 g~~~l~a~vv~~~~--~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
| +.++|+|+++++ ...+.++++++|+++|+.|.+|..++.
T Consensus 463 G-e~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~ 504 (534)
T COG0318 463 G-ERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVF 504 (534)
T ss_pred C-ceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEE
Confidence 8 999999999986 345789999999999999999998875
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-66 Score=584.18 Aligned_cols=462 Identities=20% Similarity=0.207 Sum_probs=381.6
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++||++|+++.++ ++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 58 ~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 58 AARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred HHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 4578999999998766 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
++.++.+++.+++++++++++|+++.... .+..+....+. ..+........ ....+...++++......
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~- 199 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGRLRAWGGNPDDDE---PSGSTDETLDDLIAGSST- 199 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhccccccceEEEEecCccc---cCCcCcccHHHHhcCCCC-
Confidence 99999999999999999999999875321 11111111111 11111111100 111234567776654322
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcC
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (693)
...+...++.++|+|||||||+||||+++|+++.+.+......+++.++|+++...|++|..++..++.++..|
T Consensus 200 ------~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G 273 (549)
T PRK07788 200 ------APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALG 273 (549)
T ss_pred ------CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhC
Confidence 11123457889999999999999999999999998888777788899999999999999999988888899999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
+++++.. ..++..+++.++++++|++.++|+++..|++.... ...++++||.+++|||++++++.+++.+.+ +..+
T Consensus 274 ~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l 351 (549)
T PRK07788 274 STVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVL 351 (549)
T ss_pred CEEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-Cccc
Confidence 9998875 56889999999999999999999999999876543 455678999999999999999999988776 4689
Q ss_pred ecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCCcccccccccc
Q 005501 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHE 575 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~~~~~~~~~~t 575 (693)
+|.||+||++...+..........+++|+|++|++++|+|+++++++.|+. |||++. .||++.+. .
T Consensus 352 ~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~------~- 422 (549)
T PRK07788 352 YNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVV--GRIFVGNGFPFEGYTDGRD------K- 422 (549)
T ss_pred eeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCe--EEEEEeCCCccccccCCCc------c-
Confidence 999999999865443322223345789999999999999999999999984 999993 45554321 1
Q ss_pred cccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceE
Q 005501 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (693)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~ 655 (693)
.. . ++||+|||+|++++||+++|.||+||+||++|++|+|.|||++|. +||+|.+|+|++.+++..+ +.
T Consensus 423 -~~------~--~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~ 491 (549)
T PRK07788 423 -QI------I--DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLA-GHPDVVEAAVIGVDDEEFG-QR 491 (549)
T ss_pred -cc------c--CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHH-hCCCeeEEEEECCcCcccc-cE
Confidence 11 1 239999999999999999999999999999999999999999995 9999999999999988877 89
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++|||+++++...+.++++++++++||.|++|..++.
T Consensus 492 ~~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 528 (549)
T PRK07788 492 LRAFVVKAPGAALDEDAIKDYVRDNLARYKVPRDVVF 528 (549)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCCcEEEE
Confidence 9999999887778889999999999999999998875
No 24
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.9e-64 Score=570.52 Aligned_cols=486 Identities=22% Similarity=0.309 Sum_probs=399.5
Q ss_pred CcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 005501 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (693)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~ 244 (693)
.|+.+...|....++++++ +..+|+++|+++.+.. ..+++||+||.++++++|++|.+. +++||+|+++++|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHA-DGGRKDKVALRYLDAS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIP 109 (570)
T ss_pred ccCCCCceeHHHHHHHHhh-ccCCCCceEEEEECCC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 6888888999988887654 1357999999986531 234899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCC
Q 005501 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG 322 (693)
Q Consensus 245 ~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 322 (693)
++++++|||+++|++++|+++.++.+++.+++++++++++|++......... ...+. .++++.....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 178 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPSLKHVLLVGEDVE--- 178 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCCceEEEEECCCcC---
Confidence 9999999999999999999999999999999999999999998754321110 01111 2222221110
Q ss_pred CCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEE
Q 005501 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (693)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~ 402 (693)
...+..++.++...... ........++++++|+|||||||.||||+++|+++++.+......++++++|++++
T Consensus 179 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 251 (570)
T PRK04319 179 --EGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWC 251 (570)
T ss_pred --CCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEe
Confidence 11233456665543322 11223345789999999999999999999999999888877777888999999999
Q ss_pred eCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEee
Q 005501 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAST 479 (693)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~g 479 (693)
..++.|.++. +.++.+++.|+++++.+...++..+++.|+++++|++.++|++++.|.+... ....++++||.+++|
T Consensus 252 ~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 252 TADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred cCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 9999999886 6788999999999998777789999999999999999999999999987542 234567899999999
Q ss_pred cCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe
Q 005501 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (693)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~ 559 (693)
|+++++++.+++.+.+ +.++++.||+||++..++..........+++|+|++|++++|+|++++++|.|+. |||++.
T Consensus 332 G~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~--Gel~i~ 408 (570)
T PRK04319 332 GEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRM--GNLAIK 408 (570)
T ss_pred ccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCc--eEEEEc
Confidence 9999999999888765 5789999999999875544333333456789999999999999999999999985 999984
Q ss_pred -------cccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 560 -------PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 560 -------~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
.||++ +++.++++|. +| ||+|||+|++++||+++++||.||+||++|++|+|.|||++|.
T Consensus 409 ~~~~~~~~GY~~------~~~~~~~~~~-----~g--w~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~ 475 (570)
T PRK04319 409 KGWPSMMRGIWN------NPEKYESYFA-----GD--WYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLM 475 (570)
T ss_pred CCCChHHhHhcC------CHHHhhhhhc-----CC--ceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHh
Confidence 26666 4446666664 13 9999999999999999999999999999999999999999996
Q ss_pred ccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCCh---HHHHHHHHHHHHhhcCCCceec
Q 005501 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 633 ~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+||+|.+++|++.+++..| +.+++|+++.++...+. ++++++++++|+.|+.|..++.
T Consensus 476 -~~~~V~~~~v~g~~~~~~g-~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 536 (570)
T PRK04319 476 -EHPAVAEAGVIGKPDPVRG-EIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEF 536 (570)
T ss_pred -hCCCeeecceecccCcCCc-eEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEE
Confidence 9999999999999998888 99999999987654332 5799999999999999998865
No 25
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-64 Score=585.99 Aligned_cols=441 Identities=17% Similarity=0.178 Sum_probs=364.6
Q ss_pred CCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 005501 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (693)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~ 266 (693)
.+||++|+++ +. .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+||.
T Consensus 18 ~~pd~~a~~~-~~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 18 GWYDRPAFYA-AD--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred cCCCceEEEe-cC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 3799999985 34 799999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCC
Q 005501 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (693)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (693)
++.+++.+++++++++++|++......... .. ...+.++...... ..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------------~~------------------~~~~~~~~~~~~~---~~ 135 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRDRFQP------------SR------------------VAEAAELMSEAAR---VA 135 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhhhhcc------------cc------------------cchhhhhhhhccc---cC
Confidence 999999999999999999998643211000 00 0001111111000 00
Q ss_pred CCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc-hhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCE
Q 005501 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (693)
Q Consensus 347 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (693)
........++++|||+|||||||+||||+++|+++.+.+.+.. ..++++++|++++.+++.|++++ ..++.+|..|++
T Consensus 136 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 136 PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 0011223568999999999999999999999999988776553 45788899999999999999887 668899999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+...++..+..+++++++|+++++|+++..|++... ..++++||.+++|||++++++.+++.+.+++++++|.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 9998766677888999999999999999999999987532 33578999999999999999999998888778999999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f 579 (693)
|+||++..+.... ......+++|+|+++++++|+|++++++|.|+. |||+| +.||++.++ .+ +
T Consensus 294 G~tE~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~--GEl~i~g~~v~~GY~~~~~------~~---~ 361 (705)
T PRK06060 294 GSTEVGQTFVSNR-VDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVE--GDLWVRGPAIAKGYWNRPD------SP---V 361 (705)
T ss_pred eccccCceEEecc-CCCCCcCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEccchhhhhhhCCCc------cc---c
Confidence 9999986543332 223345789999999999999999999999995 99999 457877443 21 1
Q ss_pred cccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEE
Q 005501 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (693)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~ 659 (693)
.+.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+++|+++++...+ +.+++|
T Consensus 362 ------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~~~a~ 433 (705)
T PRK06060 362 ------ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLII-EDEAVAEAAVVAVRESTGA-STLQAF 433 (705)
T ss_pred ------cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeecCccCC-eeEEEE
Confidence 13459999999999999999999999999999999999999999996 9999999999999987776 899999
Q ss_pred EEecCCCCCCh---HHHHHHHHHHHHhhcCCCceec
Q 005501 660 VVLKKGFTSQP---DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 660 vv~~~~~~~~~---~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|++.++...+. .+++++|+++||.||+|..++.
T Consensus 434 vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~ 469 (705)
T PRK06060 434 LVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAV 469 (705)
T ss_pred EEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEE
Confidence 99876544443 4788999999999999998875
No 26
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.2e-64 Score=573.36 Aligned_cols=487 Identities=21% Similarity=0.195 Sum_probs=380.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
|+++|+++|+++..........+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++| +++|++
T Consensus 35 a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~ 113 (632)
T PRK07529 35 AARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPIN 113 (632)
T ss_pred HHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCC
Confidence 47899999999753321222345999999999999999999999 9999999999999999999999999999 569999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCC---C-------CCCCCcccH
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG---I-------PLREQDLSW 332 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~-------~~~~~~~~~ 332 (693)
|.++++++.+++++++++++|++..+... .............+. .++.++....... . ....+..+|
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLGPFPGT-DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDF 192 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeCCCCCc-hHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCH
Confidence 99999999999999999999998753210 001111111222222 1222221110000 0 011223455
Q ss_pred HHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh
Q 005501 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (693)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (693)
.+.+..... ..........++++++++|||||||.||||+++|+++.+........+++.++|++++..|++|..+.
T Consensus 193 ~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 269 (632)
T PRK07529 193 DAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNAL 269 (632)
T ss_pred HHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHH
Confidence 555443321 11111223467999999999999999999999999998887777677888999999999999998887
Q ss_pred -HHHHHHHHcCCEEEEecCC-C-C---hhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcc
Q 005501 413 -VILFSSFLNGATLALYQGS-P-L---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (693)
Q Consensus 413 -~~~~~~L~~G~~lvi~~~~-~-~---~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~ 486 (693)
..++.+|..|+++++.+.. . + ...++++++++++|++.++|+++..|++... ...++++||.+++||++++++
T Consensus 270 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~gg~~l~~~ 348 (632)
T PRK07529 270 LVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALCGAAPLPVE 348 (632)
T ss_pred HHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEEcCCCCCHH
Confidence 5688999999999997632 1 2 2578899999999999999999999987643 234688999999999999999
Q ss_pred hHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEE--ECCCC---CCCCCCCCceeeEEE-ec
Q 005501 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVI--LDECG---VPYPDDQPCVGEVGL-FP 560 (693)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i--ld~~~---~~~p~G~~giGel~v-~~ 560 (693)
+.+++++.+ +++++|.||+||++..............+++|+|+|++.++| +|++| +++|.|+. |||+| ++
T Consensus 349 l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~--Gel~v~gp 425 (632)
T PRK07529 349 VFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEV--GVLCIAGP 425 (632)
T ss_pred HHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCc--eEEEEECC
Confidence 999988775 689999999999987555443333446789999999999888 47777 88999984 99998 22
Q ss_pred ccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccce
Q 005501 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE 640 (693)
Q Consensus 561 gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~ 640 (693)
+.+. +|++++.+...|. +.+||+|||+|++++||+++|.||+||+||++|++|+|.|||++|. +||+|.+
T Consensus 426 ~v~~---GY~~~~~~~~~~~------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~-~~p~V~~ 495 (632)
T PRK07529 426 NVFS---GYLEAAHNKGLWL------EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALL-RHPAVAL 495 (632)
T ss_pred Cccc---cccCCcccccccc------CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCeeE
Confidence 2222 1334444444443 2459999999999999999999999999999999999999999996 9999999
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHh-hcCCCceec
Q 005501 641 TAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS-KLNPLFKVW 692 (693)
Q Consensus 641 a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~-~m~P~~~v~ 692 (693)
|+|++.+++..| +.++|||++.++...+.++++++++++|++ +++|..++.
T Consensus 496 a~vvg~~d~~~g-e~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~ 547 (632)
T PRK07529 496 AAAVGRPDAHAG-ELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRI 547 (632)
T ss_pred EEEEeccCCCCC-ceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEE
Confidence 999999998887 999999999988778889999999999975 799988765
No 27
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-64 Score=568.58 Aligned_cols=463 Identities=18% Similarity=0.184 Sum_probs=364.3
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
.++++|+++|+++.+.+ ++||+||.++++++|++|.+. +||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~p~~~a~~~~~~~-------~~Ty~el~~~~~~lA~~L~~~--~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 98 (539)
T PRK06334 28 LCSEMTTATVCWDEQLG-------KLSYNQVRKAVIALATKVSKY--PDQHIGIMMPASAGAYIAYFATLLSGKIPVMIN 98 (539)
T ss_pred HHHhCCCceEEEeCCCC-------cccHHHHHHHHHHHHHHHhhc--cCCeEEEEcCCchHHHHHHHHHHhcCCeeEecC
Confidence 44789999999876532 899999999999999999874 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc---CCCceEEEcCCCCCCCCCCCCCcccHHHHhcccC-
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVD- 340 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (693)
|.++.+++.+++++++++++|++..... .+...... .+..++.++.... ...+.+......
T Consensus 99 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~ 163 (539)
T PRK06334 99 WSQGLREVTACANLVGVTHVLTSKQLMQ------HLAQTHGEDAEYPFSLIYMEEVRK---------ELSFWEKCRIGIY 163 (539)
T ss_pred cccchHHHHHHHHHcCCCEEEehHHHHH------HHhhhhhccccccccEEEEehhhh---------hccHHHhhhhhhh
Confidence 9999999999999999999999865321 11111110 1122232221100 001111100000
Q ss_pred -CCCCC---CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHH
Q 005501 341 -YHPRP---NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (693)
Q Consensus 341 -~~~~~---~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (693)
..+.. .........++++++|+|||||||.||||+++|+++.+...+....++++++|++++++|++|.+++ ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 243 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCT 243 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHH
Confidence 00000 0011123467999999999999999999999999998887777777889999999999999999987 457
Q ss_pred HHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhC
Q 005501 416 FSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (693)
Q Consensus 416 ~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~ 495 (693)
+.++..|+++++.....++..+++.|+++++|++.++|++++.|++.......++++||.+++||+++++++.+++.+.+
T Consensus 244 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 323 (539)
T PRK06334 244 LFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTF 323 (539)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHC
Confidence 88999999999876556889999999999999999999999999876544456688999999999999999999998888
Q ss_pred CCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEE-----ecccCCCcccc
Q 005501 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (693)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v-----~~gy~~~~~~~ 569 (693)
+++.++|.||+||++..++...........++|+|++|++++|+|+ .++++|.|+. |||++ +.||++.++
T Consensus 324 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~~-- 399 (539)
T PRK06334 324 PHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGET--GLVLTRGTSLFSGYLGEDF-- 399 (539)
T ss_pred CCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCce--EEEEEecCcccccccCCcc--
Confidence 7889999999999987655443333334568999999999999995 5889999984 99998 457776432
Q ss_pred cccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccce------eEE
Q 005501 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE------TAA 643 (693)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~------a~V 643 (693)
.+ .|.. .++++||+|||+|++++||+|+|.||.||+||++|++|+|.|||++|. +||+|.+ ++|
T Consensus 400 ----~~--~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~-~~~~v~~~~~~~~~~v 469 (539)
T PRK06334 400 ----GQ--GFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILM-EGFGQNAADHAGPLVV 469 (539)
T ss_pred ----cc--ccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHH-HccCCccccccCceEE
Confidence 22 2321 135569999999999999999999999999999999999999999996 9999998 777
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceec
Q 005501 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVW 692 (693)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~ 692 (693)
++.+++ . ..+++|++.. .+.++++++|+++ ++.||.|..+..
T Consensus 470 ~~~~~~--~-~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~ 512 (539)
T PRK06334 470 CGLPGE--K-VRLCLFTTFP----TSISEVNDILKNSKTSSILKISYHHQ 512 (539)
T ss_pred EcCCCC--c-eEEEEEEecc----CChHHHHHHHHhcCCcccccchheee
Confidence 777642 1 4677777643 3457899999996 789999987654
No 28
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=4.5e-64 Score=567.76 Aligned_cols=466 Identities=18% Similarity=0.148 Sum_probs=368.8
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++|+++|+++.++ ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 16 ~~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl 87 (563)
T PLN02860 16 LATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPL 87 (563)
T ss_pred HHHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeC
Confidence 4578999999998665 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHh-hcCCC-c-eEEEcCCCCCCCCCCCCCcccHHHHhcccC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPL-K-AIVLPAIGNDVGIPLREQDLSWKDFLSSVD 340 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (693)
++.++.+++.+++++++++++++++.... ....+. ...+. . .++......... ........++++.....
T Consensus 88 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 160 (563)
T PLN02860 88 NYRWSFEEAKSAMLLVRPVMLVTDETCSS------WYEELQNDRLPSLMWQVFLESPSSSVF-IFLNSFLTTEMLKQRAL 160 (563)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecccch------HHHHHhhccCCceeEEEEecCcccccc-cchhhccccchhccCcc
Confidence 99999999999999999999999875321 111111 11111 1 111111100000 00000111111111100
Q ss_pred CCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHH
Q 005501 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (693)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (693)
. .........++++++|+|||||||+||||+++|+++..........++++++|+++..+|++|+.++..++.++.
T Consensus 161 ~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~ 236 (563)
T PLN02860 161 G----TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLM 236 (563)
T ss_pred c----cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHH
Confidence 0 000111235789999999999999999999999999877666666788999999999999999999988899999
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCC
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (693)
.|+++++.+ ..++..+++.|+++++|++.++|+++..|++.... ....+++||.+++||+++++++.+++.+.+++.
T Consensus 237 ~G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~ 315 (563)
T PLN02860 237 VGACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNA 315 (563)
T ss_pred cCceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCC
Confidence 999999986 56888999999999999999999999999875322 224578999999999999999999998888888
Q ss_pred ceecccccccccceeccCCcCC----------------------CCccCccCCCCCCceEEEECCCCCCCCCCCCceeeE
Q 005501 499 AIIESCGGTELSSAYIQGSLLQ----------------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEV 556 (693)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel 556 (693)
+++|.||+||+++.++...... .....++|+|+++++++|+|++ .|+ +|||
T Consensus 316 ~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~--~Gel 388 (563)
T PLN02860 316 KLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSR--VGRI 388 (563)
T ss_pred ceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCc--eeEE
Confidence 9999999999976443222111 0112378999999999999976 466 5999
Q ss_pred EE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHH
Q 005501 557 GL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVC 631 (693)
Q Consensus 557 ~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L 631 (693)
++ ..||++ +++.|++.|.. ++||+|||+|++++||+++|+||+||+||++|++|+|.|||++|
T Consensus 389 ~v~g~~~~~GY~~------~~~~t~~~~~~------~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l 456 (563)
T PLN02860 389 LTRGPHVMLGYWG------QNSETASVLSN------DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVL 456 (563)
T ss_pred EEecCcccccccC------CccccchhccC------CCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHH
Confidence 98 457776 44466666643 24999999999999999999999999999999999999999999
Q ss_pred hccCcccceeEEEeecCCCCCceEEEEEEEecCCC--------------CCChHHHHHHHHH-HHHhhcCCCcee
Q 005501 632 DQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------------TSQPDKLKMIFSK-AIQSKLNPLFKV 691 (693)
Q Consensus 632 ~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~--------------~~~~~~l~~~l~~-~L~~~m~P~~~v 691 (693)
. +||+|.+|+|++++++..+ +.++|||+++++. ..+.+++++++++ +|+.|++|..++
T Consensus 457 ~-~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~ 529 (563)
T PLN02860 457 S-QHPGVASVVVVGVPDSRLT-EMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFV 529 (563)
T ss_pred H-hCCCcceeEEEEEecCcCC-ceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEE
Confidence 5 9999999999999998877 9999999988652 3556789999998 599999998875
No 29
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.2e-63 Score=553.47 Aligned_cols=451 Identities=69% Similarity=1.141 Sum_probs=339.9
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCC
Q 005501 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (693)
Q Consensus 240 ~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (693)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+..+...++........+++...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 58999999999999999999999999999999999999999999999875422212222223322222223333321111
Q ss_pred CCCCCCCCCcccHHHHhcccCCC--CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCC
Q 005501 320 DVGIPLREQDLSWKDFLSSVDYH--PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (693)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~ 397 (693)
...........+|+++....... ............++++++|+|||||||.||||+++|++++.........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 00000011234566665321100 0000111112356899999999999999999999999987766555566788999
Q ss_pred CEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccE
Q 005501 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475 (693)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~ 475 (693)
|++++.+|++|+.+.+.++.+|+.|+++++.+...++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999988888999999999998765677899999999999999999999999987542 23456889999
Q ss_pred EEeecCCCCcchHHHHHhhCC-CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCcee
Q 005501 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (693)
Q Consensus 476 v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giG 554 (693)
+++|||+++++..+++.+..+ ++.++|.||+||++..++..........+++|+|++|++++|+|++|+++|.|+..+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999998887766332 3689999999998754433322233345789999999999999999999999852259
Q ss_pred eEEEecccCCCcccccccccccccccccccC--CCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 555 EVGLFPLYLGASDRLLNADHEEVYFRGMPMY--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 555 el~v~~gy~~~~~~~~~~~~t~~~f~~~p~~--~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
||++...+++...+|++++.++.+|...|+. ++.+||+|||+|++|+||+|+|+||.||+||++|+||+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999655554445566665555555544543 56789999999999999999999999999999999999999999995
Q ss_pred cc-CcccceeEEEeecCCCCCceEEEEEE---EecCCC-CCChHHHHHHHHHHHH----hhcCCCcee
Q 005501 633 QA-DESILETAAISVSPAGGGPEVLVIFV---VLKKGF-TSQPDKLKMIFSKAIQ----SKLNPLFKV 691 (693)
Q Consensus 633 ~~-~p~V~~a~Vv~~~~~~~g~~~l~a~v---v~~~~~-~~~~~~l~~~l~~~L~----~~m~P~~~v 691 (693)
+ ||+|.+|+|++++++..|.+.++||| +++++. ..+.++++++|+++|. .|+.|..+.
T Consensus 401 -~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~ 467 (499)
T PLN03051 401 -RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVK 467 (499)
T ss_pred -hcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEE
Confidence 5 99999999999999887756899999 877764 4667888888776654 444454443
No 30
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-63 Score=557.61 Aligned_cols=460 Identities=17% Similarity=0.154 Sum_probs=374.8
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++||++|+++.++ ++||+||+++++++|++|.++ +++|++|+++++|++++++++|||+++|++++|+
T Consensus 52 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 52 AAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLL 123 (537)
T ss_pred HHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEec
Confidence 4578999999998765 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
+|.++.+++.+++++++++++|++.... ..+.......+. ..+.++.. .....++++......
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 188 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQATRIVAWTDE---------DHDLTVEVLIAAHAG 188 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccccceEEEecCC---------cccccHHHHhhccCc
Confidence 9999999999999999999999987532 111111111111 11111110 012234444332211
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
. .....+++.++++|||||||+||||+++|+++..........+.+..+++++...|++|+.++..++.++..
T Consensus 189 ------~-~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~ 261 (537)
T PRK13382 189 ------Q-RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASL 261 (537)
T ss_pred ------C-CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhc
Confidence 0 111246889999999999999999999999988877777777888899999999999999998888999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
|+++++.+ ..++..+++.|+++++|++..+|++++.|++.... ...+++++|.+++|||++++++.+.+.+.++ .+
T Consensus 262 g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~ 339 (537)
T PRK13382 262 ACTIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DV 339 (537)
T ss_pred CcEEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-Cc
Confidence 99988865 56789999999999999999999999999875421 2345678999999999999999988888774 67
Q ss_pred eecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-ecccCCCccccccccccccc
Q 005501 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVY 578 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-~~gy~~~~~~~~~~~~t~~~ 578 (693)
++|.||+||++...+..........+++|+|++|+.++|+|++++++|.|+. |||++ +++.+. +|. ++.++.
T Consensus 340 i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~---gY~-~~~~~~- 412 (537)
T PRK13382 340 IYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEV--GTIFVRNDTQFD---GYT-SGSTKD- 412 (537)
T ss_pred EEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCe--eEEEEEcCCccc---Ccc-ccchhh-
Confidence 9999999999875543332223456789999999999999999999999984 99998 332222 122 223322
Q ss_pred ccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEE
Q 005501 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (693)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a 658 (693)
| .+| ||+|||++++++||+++|.||+||+||++|++|+|.|||++|. .||+|.+++|++++++..| +.+++
T Consensus 413 ~-----~~g--~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a 483 (537)
T PRK13382 413 F-----HDG--FMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLA-THPDVAEAAVIGVDDEQYG-QRLAA 483 (537)
T ss_pred c-----cCC--CEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHH-hCCCEeeEEEEccCccccC-CEEEE
Confidence 2 123 9999999999999999999999999999999999999999995 9999999999999988777 89999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
||++.++...+.++++++++++|+.|++|..++.
T Consensus 484 ~vv~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~ 517 (537)
T PRK13382 484 FVVLKPGASATPETLKQHVRDNLANYKVPRDIVV 517 (537)
T ss_pred EEEECCCCCCCHHHHHHHHHHhccCCCCCcEEEE
Confidence 9999877667778999999999999999998865
No 31
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.9e-62 Score=551.55 Aligned_cols=473 Identities=20% Similarity=0.222 Sum_probs=381.4
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+.+|+++|+++.+.+ .+.++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 35 ~~~p~~~A~~~~~~~--~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 35 ASCPDKTAVTAVRLG--TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred HHCCCceEEEecCCC--ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEecccc
Confidence 678999999986521 12345999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC-
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH- 342 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (693)
.++.+++.+++++++++++|+++.+.. .+.......+....+. .++.+... ...++.++.......
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 181 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPALRHVVVVGGD----------GADSFEALLITPAWEQ 181 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCCcceEEEecCC----------CccCHHHHhhCCcccc
Confidence 999999999999999999999875421 0001111112111221 12222111 112344443221100
Q ss_pred --CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHH
Q 005501 343 --PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (693)
Q Consensus 343 --~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (693)
............++++++|+|||||||.||||+++|+++...+......++++++++++++.|++|..++ +.++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l 261 (547)
T PRK13295 182 EPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPV 261 (547)
T ss_pred ccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHH
Confidence 0001111223457899999999999999999999999998888887778889999999999999999876 6788999
Q ss_pred HcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 420 ~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
..|+++++.+ ..++..+++.++++++|++.++|+++..|.........++++||.+++||+++++++.+++.+.+ +++
T Consensus 262 ~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 339 (547)
T PRK13295 262 MLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAK 339 (547)
T ss_pred HcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCC
Confidence 9999999876 46788999999999999999999999999876555556788999999999999999999888776 689
Q ss_pred eecccccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccc
Q 005501 500 IIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~ 573 (693)
++|.||+||++...+..... ......++|+|+++++++|+|++++++|.|+. |||++ ..||+++ ++
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~------~~ 411 (547)
T PRK13295 340 IVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI--GRLQVRGCSNFGGYLKR------PQ 411 (547)
T ss_pred eEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC--CeEEEEcCcccccccCC------cc
Confidence 99999999998654433221 12234688999999999999999999999985 99998 4566663 33
Q ss_pred cccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCc
Q 005501 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (693)
Q Consensus 574 ~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~ 653 (693)
.|+.. .+| ||+|||+|++++||++++.||.||+||++|++|+|.|||++|. +||+|.+++|+++++...+
T Consensus 412 ~t~~~------~~g--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~-~~~~v~~~~v~~~~~~~~g- 481 (547)
T PRK13295 412 LNGTD------ADG--WFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLY-RHPAIAQVAIVAYPDERLG- 481 (547)
T ss_pred ccccC------CCC--CeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCeeeEEEEeeecCCCC-
Confidence 44432 123 9999999999999999999999999999999999999999995 9999999999999988777
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHH-HHHhhcCCCceec
Q 005501 654 EVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNPLFKVW 692 (693)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~-~L~~~m~P~~~v~ 692 (693)
+.++++|++.++...+.+++++++++ +|+.||+|..++.
T Consensus 482 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~ 521 (547)
T PRK13295 482 ERACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVV 521 (547)
T ss_pred cEEEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEE
Confidence 89999999987766777899999997 7999999998875
No 32
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.7e-62 Score=554.53 Aligned_cols=466 Identities=19% Similarity=0.200 Sum_probs=374.5
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
+.+|+++|+++...+ .++||+||+++++++|++|++ . +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 50 ~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 50 HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcC
Confidence 468999999975442 279999999999999999999 8 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
|.++.+++.++++++++++++++.... ..+.. ....++.+..... ... .......|.++......
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~--- 188 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENV---------EKLSP-LGVPVIGVPENYD-FDS-KRIEFPKFYELIKEDFD--- 188 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHH---------HHHHh-cCCcEEecCcccc-ccc-CccCcccHHHHhhcCCc---
Confidence 999999999999999999999987432 11111 1112222211000 000 00112345554433221
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch----hcCC-CCCCEEEEeCCccccchh-HHHHHH
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDL-KVGDVYCWPTNLGWVMGP-VILFSS 418 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~-~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (693)
........++++++|+|||||||.||||+++|+++...+..... .+.. ..+++++..+|++|.+++ ..++.+
T Consensus 189 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 189 --FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred --ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 11122345789999999999999999999999998876654432 2222 356788999999999987 456678
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC-CCCCCccccEEEeecCCCCcchHHHHHhhCCC
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~-~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~ 497 (693)
+..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.... ...++++||.+++||++++++..+++.+.+++
T Consensus 267 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 345 (560)
T PLN02574 267 LSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPH 345 (560)
T ss_pred HhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCC
Confidence 88999999886 46789999999999999999999999999876432 34568899999999999999999998888878
Q ss_pred CceecccccccccceeccCCc-CCCCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCccccc
Q 005501 498 NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (693)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~ 570 (693)
+.+++.||+||++...+.... ......+++|+|+++++++|+| ++|+++|.|+. |||++ ..||++
T Consensus 346 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~~~~GY~~------ 417 (560)
T PLN02574 346 VDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC--GELWIQGPGVMKGYLN------ 417 (560)
T ss_pred CcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC--eEEEEECcchhhhhcC------
Confidence 899999999999865433222 2224457899999999999999 68999999995 99999 456766
Q ss_pred ccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCC
Q 005501 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (693)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~ 650 (693)
+++.|++.|.. ++||+|||+|++++||+++++||+||+||++|++|++.|||++|. .||+|.+++|++++++.
T Consensus 418 ~~~~t~~~~~~------~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~V~~~~v~~~~~~~ 490 (560)
T PLN02574 418 NPKATQSTIDK------DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLI-SHPEIIDAAVTAVPDKE 490 (560)
T ss_pred ChhHhhhhccC------CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHH-hCCCcceEEEEccccCC
Confidence 55567666643 239999999999999999999999999999999999999999996 99999999999999887
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+ +.+++||+.+++...+.++++++++++|+.|+.|..+++
T Consensus 491 ~g-~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~ 531 (560)
T PLN02574 491 CG-EIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVF 531 (560)
T ss_pred CC-cceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEE
Confidence 77 889999998877667778999999999999999987654
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=4.3e-62 Score=549.16 Aligned_cols=464 Identities=20% Similarity=0.234 Sum_probs=378.7
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+++|+++|+++.+.+ +++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~~~~~a~~~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 34 SEFSDRPCLIDGATG------RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred HhCCCCeEEEecCCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCC
Confidence 578999999875321 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (693)
.++.+++..++++++++++|+++... ..+..+.......++.++... .....+.++......
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~---- 169 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDDGVTVVTIDDPP--------EGCLHFSELTQADEN---- 169 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcCCceEEEeCCCC--------CCceeHHHHhcCCCC----
Confidence 99999999999999999999987532 111122111111222222110 122334444332211
Q ss_pred CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch----hcCCCCCCEEEEeCCccccchh-HHHHHHHH
Q 005501 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (693)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (693)
..+.....+++++|++|||||||.||||+++|+++.+.+.+... .++++++|+++..+|++|++++ ..++.++.
T Consensus 170 -~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 170 -ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred -CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 11223346799999999999999999999999999877654432 5678999999999999999987 45778899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.++++++.+
T Consensus 249 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~ 327 (537)
T PLN02246 249 VGAAILIMP-KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVL 327 (537)
T ss_pred cCCEEEEeC-CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeE
Confidence 999999987 4678899999999999999999999999987654445567899999999999999999999998888889
Q ss_pred ecccccccccceeccCCc----CCCCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCccccc
Q 005501 501 IESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~ 570 (693)
++.||+||++.+++.... ......+++|+|+++++++|+| ++++++|.|+. |||++ +.||++
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~------ 399 (537)
T PLN02246 328 GQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQP--GEICIRGPQIMKGYLN------ 399 (537)
T ss_pred eccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCc--eEEEEECCchhccccC------
Confidence 999999999865433211 1123346799999999999999 57899999985 99998 456766
Q ss_pred ccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCC
Q 005501 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (693)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~ 650 (693)
+++.++.+|.. ++||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. .||+|.+|+|++.++..
T Consensus 400 ~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~ 472 (537)
T PLN02246 400 DPEATANTIDK------DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLI-SHPSIADAAVVPMKDEV 472 (537)
T ss_pred CchhhhhcccC------CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHH-hCCCeeEEEEEcccCcc
Confidence 44456655542 349999999999999999999999999999999999999999995 99999999999998887
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+ +.++++++..++...+.++++++|+++|+.|+.|..++.
T Consensus 473 ~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~ 513 (537)
T PLN02246 473 AG-EVPVAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFF 513 (537)
T ss_pred CC-ceeEEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEE
Confidence 77 899999999877667778999999999999999987754
No 34
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6e-63 Score=565.56 Aligned_cols=444 Identities=16% Similarity=0.165 Sum_probs=339.0
Q ss_pred cCCCCCCcEEEEEecC-CCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 185 HRRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
+++++||++|+.+.+. .+..+.+..+||+||+++++++|++|+++ +++||+|+|+++|+++|++++|||+++|+++||
T Consensus 54 ~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vp 133 (666)
T PLN02614 54 SVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVP 133 (666)
T ss_pred HHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEE
Confidence 3478999999986421 00112345689999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC------CceEEEcCCCCCCC---CCCCCCcccHH
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP------LKAIVLPAIGNDVG---IPLREQDLSWK 333 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~ 333 (693)
+++.++.+++.+++++++++++|+++... ..+....+ ..++.+........ ........+++
T Consensus 134 l~~~~~~~~l~~il~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 134 LYDTLGAGAVEFIISHSEVSIVFVEEKKI---------SELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred ecCCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 99999999999999999999999986421 11211111 12222321100000 00001124566
Q ss_pred HHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc-----CCCCCCEEEEeCCccc
Q 005501 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGW 408 (693)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 408 (693)
++....... ........++|+|+|+|||||||.||||++||+++++.+.+....+ +++++|++++++|++|
T Consensus 205 ~~~~~~~~~----~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H 280 (666)
T PLN02614 205 EFLKLGEGK----QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAH 280 (666)
T ss_pred HHHhhcccC----CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHH
Confidence 665432210 0111223579999999999999999999999999988776544332 5788999999999999
Q ss_pred cchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC-----------------------
Q 005501 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----------------------- 465 (693)
Q Consensus 409 ~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~----------------------- 465 (693)
.++....+.+++.|+++++.+ .++..+++.|+++++|++.++|++++.+......
T Consensus 281 ~~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (666)
T PLN02614 281 IFDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGN 358 (666)
T ss_pred HHHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 988755667788999998875 3678999999999999999999999987642100
Q ss_pred --------CCC-------------CC-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCc
Q 005501 466 --------EGL-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (693)
Q Consensus 466 --------~~~-------------~l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (693)
... .+ ++||.+++||+++++.+ ..+...+++++++|+||+||+++..+...+.....
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~ 437 (666)
T PLN02614 359 MKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDM 437 (666)
T ss_pred HHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCc
Confidence 000 01 58999999999999865 45555665689999999999976443333322234
Q ss_pred cCccCCCCCCceEEEEC-CC--CCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecc
Q 005501 524 FGAFSTATMTAGLVILD-EC--GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGD 595 (693)
Q Consensus 524 ~~~iG~p~~~~~~~ild-~~--~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGD 595 (693)
.+++|+|+||++++|+| ++ +++++.|+. |||+| +.||++ +++.|++.|. + | ||+|||
T Consensus 438 ~gsvG~p~pg~evki~d~~~~~~~~~~~g~~--GEl~vrGp~v~~GY~~------~pe~T~~~f~-d----G--w~~TGD 502 (666)
T PLN02614 438 LGTVGPPVPNVDIRLESVPEMEYDALASTPR--GEICIRGKTLFSGYYK------REDLTKEVLI-D----G--WLHTGD 502 (666)
T ss_pred CCcccCcCCceEEEEeeecccCcccCCCCCC--ceEEEcCCcccccccC------CHHHhhhhhc-c----C--Ccccce
Confidence 67999999999999998 33 478899985 99998 457776 5668888884 1 3 999999
Q ss_pred eEEEecCCcEEEEeecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 596 IIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 596 l~~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. +||+|.+|+|++.... ..++|+|+++.
T Consensus 503 lg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~~~V~g~~~~----~~l~alvv~~~ 567 (666)
T PLN02614 503 VGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG-EVQAVDSVWVYGNSFE----SFLVAIANPNQ 567 (666)
T ss_pred EEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHh-cCCCeeEEEEEecCCc----ceEEEEEeCCH
Confidence 9999999999999999999996 699999999999995 9999999999985421 57999999864
No 35
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-62 Score=550.55 Aligned_cols=471 Identities=20% Similarity=0.215 Sum_probs=375.7
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+++.++ .+||+||.++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 34 a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 34 CQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeec
Confidence 467999999998765 99999999999999999997 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCC-------------------CC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG-------------------IP 324 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 324 (693)
+|.++.+++..++++++++++|++..... ...++......+.+++........ ..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMAH------LAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchhh------hHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 99999999999999999999999764321 111211111111122211000000 00
Q ss_pred CCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC--CCC-CCEEE
Q 005501 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKV-GDVYC 401 (693)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~-~d~~l 401 (693)
...+...+.+.+..... .........++++++|+|||||||+||||+++|+++...+......+. +.. .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 180 HLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred CCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 00112234444332221 111122346799999999999999999999999999776655444333 333 36788
Q ss_pred EeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeec
Q 005501 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (693)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG 480 (693)
+..|+.|..++ +.++.++..|++.++.+...++..+++.|+++++|.+..+|+++..+.........+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 89999999887 56778888999888877556788999999999999999999999999876544445578999999999
Q ss_pred CCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE--
Q 005501 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (693)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-- 558 (693)
+++++++.+++.+.+ ++++++.||+||++.+...... .....+++|+|+++++++|+|++++++|.|+. |||++
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV--GELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-cCCCCCccCccCCCCEEEEECCCCCCCCCCCC--eEEEEec
Confidence 999999988888765 6899999999998865543332 23345789999999999999999999999985 99998
Q ss_pred ---ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccC
Q 005501 559 ---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (693)
Q Consensus 559 ---~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~ 635 (693)
.+||++ +++.|++.|..+ +||+|||+|++++||+++|.||+||+||++|++|+|.|||++|. .|
T Consensus 412 ~~~~~gY~~------~~~~t~~~~~~~------g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~-~~ 478 (562)
T PRK05677 412 PQVMKGYWQ------RPEATDEILDSD------GWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLA-AL 478 (562)
T ss_pred CccchhhcC------CchhhhhccCCC------CcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHH-hC
Confidence 457776 555777777532 39999999999999999999999999999999999999999995 99
Q ss_pred cccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 636 p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+|.+++|++++++..+ +.+++||+++++...+.++++++++++|+.|++|..++.
T Consensus 479 ~~v~~~~v~g~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 534 (562)
T PRK05677 479 PGVLQCAAIGVPDEKSG-EAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEF 534 (562)
T ss_pred CCccEEEEEeccCccCC-ceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEE
Confidence 99999999999988777 899999998877667889999999999999999998875
No 36
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.9e-63 Score=567.63 Aligned_cols=448 Identities=17% Similarity=0.136 Sum_probs=345.5
Q ss_pred CCCCCCcEEEEEec-CCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+.+.. ..+..+.++.+||+||.++++++|++|+++ +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 54 a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 54 VETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPL 133 (651)
T ss_pred HHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 47899999996421 111223456799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-c-eEEEcCCCCCC-C--CCCCCCcccHHHHhcc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-K-AIVLPAIGNDV-G--IPLREQDLSWKDFLSS 338 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 338 (693)
++.++.+++.+++++++++++|++.... +.+.......+. . ++++....... . ........+|+++...
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQ 207 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHh
Confidence 9999999999999999999999986432 112222222222 1 22221110000 0 0001123467776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHH
Q 005501 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (693)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (693)
.... ........++|+|+|+|||||||.||||++||+++...+.+....+++.++|++++++|++|+++.+.++.+
T Consensus 208 ~~~~----~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~ 283 (651)
T PLN02736 208 GRSS----PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVM 283 (651)
T ss_pred cccC----CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHH
Confidence 3220 111223467999999999999999999999999999888888778889999999999999999999888899
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc-----------------------------CCCC-
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----------------------------LEGL- 468 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~-----------------------------~~~~- 468 (693)
|+.|+++++.+. ++..+++.|+++++|++..+|++++.+.+... ....
T Consensus 284 l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (651)
T PLN02736 284 LHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPM 361 (651)
T ss_pred HHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCch
Confidence 999999998764 56789999999999999999999988754310 0000
Q ss_pred -----------CC-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceE
Q 005501 469 -----------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 536 (693)
Q Consensus 469 -----------~l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 536 (693)
.+ +++|.+++||+++++++.+++...+ ++++++.||+||+++..+.... .....+++|+|+||+++
T Consensus 362 ~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~v 439 (651)
T PLN02736 362 WDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMDE-GDNLSGHVGSPNPACEV 439 (651)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccCC-CCCCCCccCCccCceEE
Confidence 01 4799999999999999999887665 5789999999999865443332 23456789999999999
Q ss_pred EEECC-CCCCCCCCCCc-eeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEe
Q 005501 537 VILDE-CGVPYPDDQPC-VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQG 609 (693)
Q Consensus 537 ~ild~-~~~~~p~G~~g-iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~G 609 (693)
+|+|. ++.....+.++ .|||++ +.||++ +++.|++.|..+ +||+|||+|++|+||+|+|+|
T Consensus 440 ~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~------~~~~t~~~~~~d------gw~~TGDlg~~d~dG~l~i~G 507 (651)
T PLN02736 440 KLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYK------DEVQTREVIDED------GWLHTGDIGLWLPGGRLKIID 507 (651)
T ss_pred EEEEccccCcccCCCCCCCceEEecCCcccccccc------CHHHHHhhhccC------CCeeccceEEEcCCCcEEEEE
Confidence 99983 32211111111 489988 567776 556787777532 399999999999999999999
Q ss_pred ecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 610 RADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 610 R~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
|+||+||+ +|++|+|.|||++|. .||+|.+|+|++. ..+ +.++|+||+++
T Consensus 508 R~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~---~~~-~~~~A~vv~~~ 558 (651)
T PLN02736 508 RKKNIFKLAQGEYIAPEKIENVYA-KCKFVAQCFVYGD---SLN-SSLVAVVVVDP 558 (651)
T ss_pred echhheEcCCCcEechHHHHHHHh-cCCCeeEEEEEec---CCC-ceeEEEEEeCH
Confidence 99999997 699999999999995 9999999999982 234 79999999875
No 37
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-62 Score=548.60 Aligned_cols=472 Identities=20% Similarity=0.219 Sum_probs=384.8
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+++.+. ++||+||.++++++|..|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 91 (546)
T PRK08314 20 ARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPV 91 (546)
T ss_pred HHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeec
Confidence 468999999998877 999999999999999999986 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc-eEEEcCCCC---CCC--------------CCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGN---DVG--------------IPL 325 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~--------------~~~ 325 (693)
+|..+.+++..+++++++++++++..... .+.......... +++...... ... ...
T Consensus 92 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 92 NPMNREEELAHYVTDSGARVAIVGSELAP------KVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred CcCcCHHHHHHHHHhCCCeEEEEccchhh------hHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 99999999999999999999999875321 111111111111 111110000 000 000
Q ss_pred CCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCC
Q 005501 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (693)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~ 405 (693)
..+...|++....... .......++++|+|+|||||||.||||+++|+++++.+......+++..+|++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 166 PGGVVAWKEALAAGLA------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred ccccccHHHHhcccCC------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcC
Confidence 1123456655443211 1223346789999999999999999999999999998888777888999999999999
Q ss_pred ccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCC
Q 005501 406 LGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN 484 (693)
Q Consensus 406 ~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~ 484 (693)
++|..++ +.++.++.+|+++++.+ ..++..++++++++++|++.++|+++..++........+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999987 66789999999999987 457889999999999999999999999998765445566789999999999999
Q ss_pred cchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEE-----
Q 005501 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL----- 558 (693)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v----- 558 (693)
+++.+++.+.+ +.++++.||+||++......... .....++|+|++|++++|+|+ ++++++.|.. |||++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~ 394 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD-RPKLQCLGIPTFGVDARVIDPETLEELPPGEV--GEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCCCc-CCCCCccCcccCCeEEEEEeCCCCcCCCCCCc--eEEEEECCch
Confidence 99999988776 57899999999998654433222 234568999999999999994 6899999984 99998
Q ss_pred ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCccc
Q 005501 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (693)
Q Consensus 559 ~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V 638 (693)
..||++ +++.|++.|..+ +|.+||+|||+|++++||++++.||+||+||++|++|+|.|||++|. ++|+|
T Consensus 395 ~~gY~~------~~~~t~~~f~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~-~~~~v 464 (546)
T PRK08314 395 FKGYWN------RPEATAEAFIEI---DGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY-KHPAI 464 (546)
T ss_pred hccccC------ChhHhhhhhhhc---CCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH-hCcch
Confidence 456666 444666666543 35669999999999999999999999999999999999999999995 99999
Q ss_pred ceeEEEeecCCCCCceEEEEEEEecCCC--CCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 639 LETAAISVSPAGGGPEVLVIFVVLKKGF--TSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 639 ~~a~Vv~~~~~~~g~~~l~a~vv~~~~~--~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
.+++|++.++...+ +.+++||+++++. ..+.++++++++++|+.|++|..++.+
T Consensus 465 ~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v 520 (546)
T PRK08314 465 QEACVIATPDPRRG-ETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFV 520 (546)
T ss_pred heEEEEeCCCcccC-ceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEe
Confidence 99999999988777 8999999998753 345689999999999999999988753
No 38
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-61 Score=540.74 Aligned_cols=468 Identities=24% Similarity=0.270 Sum_probs=387.5
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. ++||+||.+++.++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 15 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 86 (513)
T PRK07656 15 ARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLN 86 (513)
T ss_pred HHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 468999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
+.++.+++..++++++++++++++... ..........+. .++........ .......+|+++......
T Consensus 87 ~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 87 TRYTADEAAYILARGDAKALFVLGLFL------GVDYSATTRLPALEHVVICETEEDD---PHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhH------HHHHHHHhccCCccEEEEEcCcccc---cCccccccHHHHHhcCCC-
Confidence 999999999999999999999987532 111111112211 12222211110 001123456766543221
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHc
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (693)
........++++++|+|||||||.||+|.++|+++.+.+......++++++|++++.+|+.|++++ ..++.++..
T Consensus 157 ----~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (513)
T PRK07656 157 ----AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMR 232 (513)
T ss_pred ----CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHc
Confidence 112234567899999999999999999999999999888888788899999999999999999987 458899999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+ ..++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+++.+.++...++
T Consensus 233 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~ 311 (513)
T PRK07656 233 GATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVL 311 (513)
T ss_pred CceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceE
Confidence 99998865 46788999999999999999999999999987655556788999999999999999999998877533899
Q ss_pred cccccccccceeccCCcCCCCc--cCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccccc
Q 005501 502 ESCGGTELSSAYIQGSLLQPQA--FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~--~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~ 574 (693)
|.||+||+++..+.+....... .+++|+|+++++++|+|+++++++.|.. |||++ ..||++ ++..
T Consensus 312 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~ 383 (513)
T PRK07656 312 TGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEV--GELLVRGPNVMKGYYD------DPEA 383 (513)
T ss_pred eEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCc--eEEEEEcchhhhhhcC------CHHH
Confidence 9999999987665554332222 5789999999999999999999999985 99998 456766 3335
Q ss_pred ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 575 t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
+...|.. +.||+|||+|++++||+++++||.||+||++|.+|+|.|||++|. ++|+|.+++|++.+++..| +
T Consensus 384 ~~~~~~~------~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~i~~~~v~~~~~~~~g-~ 455 (513)
T PRK07656 384 TAAAIDA------DGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLY-EHPAVAEAAVIGVPDERLG-E 455 (513)
T ss_pred Hhhhhcc------CCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHH-hCCCeeEEEEEecCCcccC-c
Confidence 5555532 239999999999999999999999999999999999999999995 9999999999999888777 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+++||+.+++...+.++++++++++||.+++|..++.
T Consensus 456 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 493 (513)
T PRK07656 456 VGKAYVVLKPGAELTEEELIAYCREHLAKYKVPRSIEF 493 (513)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHhhcccccCCCEEEE
Confidence 99999999876667888999999999999999988764
No 39
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=5.7e-61 Score=537.89 Aligned_cols=472 Identities=21% Similarity=0.227 Sum_probs=389.0
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+++|+++|+.+.++ ++||+||.++++++|++|++. +++|++|+++++|++++++++|||+++|++++|+++
T Consensus 11 ~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 82 (515)
T TIGR03098 11 ARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINP 82 (515)
T ss_pred HHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCC
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
..+.+++..+++++++++++++.... ..+.......+. .++.+...... .........|+++......
T Consensus 83 ~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 152 (515)
T TIGR03098 83 LLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHDLRTLILVGEPAHA--SEGGGESPSWPKLLALGDA-- 152 (515)
T ss_pred CCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccccceEEEecCcccc--cCCccccccHHHhhccccc--
Confidence 99999999999999999999986432 111111111111 22233221110 0011233456665443221
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (693)
........+++++|+|||||||.||||+++|+++...+......+++..+|++++..|++|++++..++.++..|+
T Consensus 153 ----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 228 (515)
T TIGR03098 153 ----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGA 228 (515)
T ss_pred ----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCC
Confidence 1222345689999999999999999999999999888887777788999999999999999999988999999999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++++.+ ..+++.+++.++++++|++.++|+++..|.+... ...+++++|.+++||+++++.+.+.+.+.++++.+++.
T Consensus 229 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 229 TVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred EEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 999886 4678999999999999999999999999987532 22356899999999999999999999988878899999
Q ss_pred cccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccccccccc
Q 005501 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~ 578 (693)
||+||++..............+++|+|++|++++|+|+++++++.|+. ||+++ ..||++ +++.+++.
T Consensus 307 YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~gy~~------~~~~~~~~ 378 (515)
T TIGR03098 307 YGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEE--GELVHRGALVAMGYWN------DPEKTAER 378 (515)
T ss_pred eccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCc--eEEEEcCchhhccccC------Cchhhhhh
Confidence 999999764433222223456789999999999999999999999985 99998 567777 44466667
Q ss_pred cccccc-----CCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCc
Q 005501 579 FRGMPM-----YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (693)
Q Consensus 579 f~~~p~-----~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~ 653 (693)
|.+.+. ..+.+||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .||.|.+|+|++++++..|
T Consensus 379 ~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g- 456 (515)
T TIGR03098 379 FRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG- 456 (515)
T ss_pred hhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHh-cCCCeeEEEEEeccCcccC-
Confidence 765432 223468999999999999999999999999999999999999999996 9999999999999988877
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+.++++++..++...+..+++++++++|+.++.|..++.
T Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~ 495 (515)
T TIGR03098 457 QAIVLVVTPPGGEELDRAALLAECRARLPNYMVPALIHV 495 (515)
T ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHhhCccccCCCEEEE
Confidence 899999997766667888999999999999999998775
No 40
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-61 Score=534.66 Aligned_cols=453 Identities=20% Similarity=0.211 Sum_probs=375.0
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
+|+.+||++|+++.+. .+||+||.++++++|++|++ . +++|++|+++++|++++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 11 RAYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred HHHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 3478999999998766 99999999999999999986 5 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC-CceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
+++.++.+++..++++++++++++++... +....+..... ...+.+. ++.++......
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 141 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQ------NMALSMQKVSYVQRVISIT---------------SLKEIEDRKID 141 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHH------HHHHHhhhccCcceEEEec---------------chHhhhccCCC
Confidence 99999999999999999999999987532 11111111111 1111111 12222221111
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHH
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (693)
......++++++|+|||||||.||+|+++|+++..........++++.+|+++...|+.|..++ +.++.++.
T Consensus 142 -------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 142 -------NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred -------CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 1123456899999999999999999999999987666666667788999999999999999887 45678899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+++++.+ ..++..+++.++++++|++.++|++++.|+........+++++|.+++||+++++.+.+++.+. ++++
T Consensus 215 ~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~ 291 (496)
T PRK06839 215 AGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLF 291 (496)
T ss_pred cCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCee
Confidence 999998865 5688999999999999999999999999998765555678899999999999999999888775 6899
Q ss_pred ecccccccccceeccCCc-CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccccc
Q 005501 501 IESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~ 574 (693)
.+.||+||++...+.... ......+++|+|+++++++|+|+++++++.|+. |||+| .+||++ +++.
T Consensus 292 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~ 363 (496)
T PRK06839 292 GQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEV--GELLIRGPNVMKEYWN------RPDA 363 (496)
T ss_pred EeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCc--eEEEEECCCcchhhcC------ChHH
Confidence 999999999864433322 223456789999999999999999999999985 99998 356665 3345
Q ss_pred ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 575 t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
++..|. +| ||+|||++++++||++++.||.||+||++|.+|+|.|||++|. .+|+|.+|+|++.+++..+ +
T Consensus 364 ~~~~~~-----~g--~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~ 434 (496)
T PRK06839 364 TEETIQ-----DG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVIN-KLSDVYEVAVVGRQHVKWG-E 434 (496)
T ss_pred HHHHHc-----CC--CeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-c
Confidence 544442 23 9999999999999999999999999999999999999999996 9999999999999988877 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
.++++|+++++...+.++++++++++|+.+++|..++.+
T Consensus 435 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v 473 (496)
T PRK06839 435 IPIAFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEIVFL 473 (496)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEEEEe
Confidence 999999998877777789999999999999999988753
No 41
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-61 Score=553.03 Aligned_cols=467 Identities=17% Similarity=0.173 Sum_probs=362.4
Q ss_pred CCCCCCcEEEEEecCC-CCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec-
Q 005501 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI- 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl- 263 (693)
++.+|+++|+++.+.. ...+..+.+||+||.++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 31 a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 110 (631)
T PRK07769 31 AKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLF 110 (631)
T ss_pred HHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeC
Confidence 3678999999975421 01123458999999999999999998669999999999999999999999999999999999
Q ss_pred CCCCC--HHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC----CceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 264 ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 264 ~p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
++..+ .+++.+++++++++++|+++... +.........+ ..++.++... +..
T Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~- 168 (631)
T PRK07769 111 DPAEPGHVGRLHAVLDDCTPSAILTTTDSA------EGVRKFFRARPAKERPRVIAVDAVP---------------DEV- 168 (631)
T ss_pred CCCccchHHHHHHHHHhCCCCEEEEChHHH------HHHHHHHhhccccccceEEEccccc---------------ccc-
Confidence 56665 68999999999999999987532 11111111111 1111111000 000
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHH
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (693)
. .........++++++|+|||||||+||||+++|+++...+......+++.++|++++++|++|++++..++.
T Consensus 169 --~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~ 241 (631)
T PRK07769 169 --G-----ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLL 241 (631)
T ss_pred --c-----cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHH
Confidence 0 001111345789999999999999999999999999888877777888999999999999999999988888
Q ss_pred HHHcCCEEEEecC-CC--ChhhHHHHHHHcCC---cEEeechHHHHHHHhcC---c--CCCCCCccccEEEeecCCCCcc
Q 005501 418 SFLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKAWRNTN---C--LEGLDWTKIRSFASTGETSNVD 486 (693)
Q Consensus 418 ~L~~G~~lvi~~~-~~--~~~~~~~~i~~~~v---t~l~~~P~~l~~l~~~~---~--~~~~~l~~lr~v~~gGe~l~~~ 486 (693)
+++.|++++++++ .. ++..+++.++++++ +++..+|+++..+.... . ....++++||.+++||++++++
T Consensus 242 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~ 321 (631)
T PRK07769 242 PALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPA 321 (631)
T ss_pred HHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHH
Confidence 8899999998864 23 77889999999886 78999999887766431 1 1145688999999999999999
Q ss_pred hHHHHHhhCC-----CCceecccccccccceeccCCcCCC--------------------------CccCccCCCCCCce
Q 005501 487 DDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAG 535 (693)
Q Consensus 487 ~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~ 535 (693)
+.+++.+.+. ...++|.||+||++..++....... ....++|+|+++++
T Consensus 322 ~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~ 401 (631)
T PRK07769 322 SMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEW 401 (631)
T ss_pred HHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcE
Confidence 9988887652 2469999999999765443221110 01247899999999
Q ss_pred EEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCccccccccccccccccccc-----------CCCceeeeecceEE
Q 005501 536 LVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM-----------YKGMCLRRHGDIIK 598 (693)
Q Consensus 536 ~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~-----------~~g~~~yrTGDl~~ 598 (693)
++|+| ++|+++|.|+ +|||++ +.||++ +++.|++.|...+. ..+.+||||||+|+
T Consensus 402 ~~ivd~~~g~~~~~ge--~GEl~v~gp~v~~GY~~------~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~ 473 (631)
T PRK07769 402 AVIVDPETASELPDGQ--IGEIWLHGNNIGTGYWG------KPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGV 473 (631)
T ss_pred EEEEcCCCCcCCCCCC--EEEEEecCCCccccccC------ChhHHHHHHhhhcccccccccccCcccCCCeeecccccc
Confidence 99999 5799999999 599998 467776 55578888864211 12346999999999
Q ss_pred EecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccce--eEEEeecC-------------------CCCCceEEE
Q 005501 599 RTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSP-------------------AGGGPEVLV 657 (693)
Q Consensus 599 ~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~--a~Vv~~~~-------------------~~~g~~~l~ 657 (693)
++ ||+|+|+||.||+||++|+||+|.|||++|.+.||+|.+ ++|+++++ +..+ +.++
T Consensus 474 ~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~g-e~~~ 551 (631)
T PRK07769 474 YF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTS-EQLV 551 (631)
T ss_pred EE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCC-ccEE
Confidence 95 999999999999999999999999999999624899998 99999988 4456 8999
Q ss_pred EEEEecCCC-CCChHHHHHHHHHHHHh-hc-CCCcee
Q 005501 658 IFVVLKKGF-TSQPDKLKMIFSKAIQS-KL-NPLFKV 691 (693)
Q Consensus 658 a~vv~~~~~-~~~~~~l~~~l~~~L~~-~m-~P~~~v 691 (693)
++|+++++. ..+.++|+++++++|.. +. .|..+.
T Consensus 552 a~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~ 588 (631)
T PRK07769 552 IVAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVL 588 (631)
T ss_pred EEEEecCccccccHHHHHHHHHHHHHHHcCCCccEEE
Confidence 999998763 56778999999999996 45 476543
No 42
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-61 Score=534.11 Aligned_cols=444 Identities=21% Similarity=0.226 Sum_probs=365.9
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
+|+++|+++|+++.+. ++||+||.++++++|++|.+...+|++|+|+++|++++++++|||+++|++++|++
T Consensus 10 ~a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 81 (487)
T PRK07638 10 HASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLD 81 (487)
T ss_pred HHHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecC
Confidence 3478999999998776 99999999999999999998833799999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+.++.+++..++++++++++|++........ . ....++.+. .+.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---------~-~~~~~~~~~---------------~~~~~~~~~~~--- 133 (487)
T PRK07638 82 IKWKQDELKERLAISNADMIVTERYKLNDLP---------D-EEGRVIEID---------------EWKRMIEKYLP--- 133 (487)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEecccccchh---------h-ccceEEEeh---------------hhhhhhhhccc---
Confidence 9999999999999999999999875321110 0 001111111 11111111110
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCE
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (693)
.........+++++|+|||||||.||||+++|++++..+......++++++|+++...++.|+.+++.++.++..|++
T Consensus 134 --~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~ 211 (487)
T PRK07638 134 --TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQT 211 (487)
T ss_pred --cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcE
Confidence 011112235778999999999999999999999998888877778889999999999999999988888999999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+ ..++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|++++.+..+++.+.+++++++|.|
T Consensus 212 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~Y 286 (487)
T PRK07638 212 VHLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFY 286 (487)
T ss_pred EEEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEe
Confidence 99886 5788999999999999999999999999987632 1 34556677889999999999999888889999999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f 579 (693)
|+||++..+............++|+|++|+.++|+|++|+++|.|+. |||++ ..||+++ ++.+.+.+
T Consensus 287 G~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--Gel~v~~~~~~~gy~~~------~~~~~~~~ 358 (487)
T PRK07638 287 GASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEI--GTVYVKSPQFFMGYIIG------GVLARELN 358 (487)
T ss_pred cCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCC--eEEEEecccceeeecCC------HHHHhhhc
Confidence 99999876554443334456789999999999999999999999985 99998 3466553 22333322
Q ss_pred cccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEE
Q 005501 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (693)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~ 659 (693)
.++||+|||+|++++||+++++||+||+||++|++|+|.|||++|. +||+|.+|+|++.+++..| +.++++
T Consensus 359 -------~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~ 429 (487)
T PRK07638 359 -------ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLH-EHPAVDEIVVIGVPDSYWG-EKPVAI 429 (487)
T ss_pred -------cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEecCchhcC-CeeEEE
Confidence 2239999999999999999999999999999999999999999996 9999999999999988777 889998
Q ss_pred EEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+. ..+.++++++++++|+.|++|..++.
T Consensus 430 v~~----~~~~~~l~~~~~~~l~~~~~p~~i~~ 458 (487)
T PRK07638 430 IKG----SATKQQLKSFCLQRLSSFKIPKEWHF 458 (487)
T ss_pred EEC----CCCHHHHHHHHHHHhhcccCCcEEEE
Confidence 874 24568999999999999999988765
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-61 Score=543.75 Aligned_cols=464 Identities=15% Similarity=0.144 Sum_probs=361.6
Q ss_pred CCCCCCcEEEEEecCCC--CCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 186 RRKEDNTVAIVWREDRC--DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~--~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
++++|+++|+++.+.+. ....++++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|
T Consensus 16 a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 16 AQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 46799999999865411 011234799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC---CCceEEEcCCCCCCCCCCCCCcccHHHHhccc
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (693)
++|.++.+++.+++++++++++|+++... ....+.... ....+.+... .......+.++....
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIPKAH-------LARRLFGWGKPSVRRLVTVGGR-------LLWGGTTLATLLRDG 161 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEeccHHH-------HHHHHhccCccchhheeccccc-------cccCCccHHHhcccC
Confidence 99999999999999999999999865210 001110000 0011111100 001122455544221
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHH
Q 005501 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (693)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (693)
.. .........++++++|+|||||||.||||+++|+++.+.+.+....+++.++|++++..|+.+.. .+
T Consensus 162 ~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~-------~~ 230 (552)
T PRK09274 162 AA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF-------GP 230 (552)
T ss_pred cc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh-------hh
Confidence 11 11222334678999999999999999999999999999888887888999999998887765432 34
Q ss_pred HcCCEEEEecC------CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHh
Q 005501 420 LNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (693)
Q Consensus 420 ~~G~~lvi~~~------~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~ 493 (693)
..|+++++.+. ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++||+++++++.+++.+
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~ 310 (552)
T PRK09274 231 ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRA 310 (552)
T ss_pred hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHH
Confidence 56888887652 246789999999999999999999999998765445567899999999999999999999998
Q ss_pred hCC-CCceecccccccccceeccCCcC---------CCCccCccCCCCCCceEEEECC---------CCCCCCCCCCcee
Q 005501 494 KAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILDE---------CGVPYPDDQPCVG 554 (693)
Q Consensus 494 ~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~~~ild~---------~~~~~p~G~~giG 554 (693)
.++ +++++|.||+||++...+..... ......++|+|+++++++|+|+ ++++++.|+ +|
T Consensus 311 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~--~G 388 (552)
T PRK09274 311 MLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGE--IG 388 (552)
T ss_pred HcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCC--ee
Confidence 876 47999999999998654432211 1112347899999999999994 567899998 49
Q ss_pred eEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHH
Q 005501 555 EVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 629 (693)
Q Consensus 555 el~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~ 629 (693)
||++ +.||++ +++.|...|..++ .|.+||+|||+|++++||+|+|+||.||+||++|++|+|.|||+
T Consensus 389 el~v~g~~~~~GY~~------~~~~t~~~~~~~~--~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~ 460 (552)
T PRK09274 389 EIVVAGPMVTRSYYN------RPEATRLAKIPDG--QGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCER 460 (552)
T ss_pred EEEEecCcccccccC------ChHHhhhhhcccC--CCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHH
Confidence 9998 467777 4456666554332 23469999999999999999999999999999999999999999
Q ss_pred HHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCC
Q 005501 630 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP 687 (693)
Q Consensus 630 ~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P 687 (693)
+|. +||+|.+|+|++++++. + +.++++|++.++...+.++++++|++.+..+..|
T Consensus 461 ~l~-~~p~V~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~ 515 (552)
T PRK09274 461 IFN-THPGVKRSALVGVGVPG-A-QRPVLCVELEPGVACSKSALYQELRALAAAHPHT 515 (552)
T ss_pred HHH-hCcccceeEEEEeCCCC-C-ceEEEEEEccCccccchHHHhhhhHHHHHhcCCC
Confidence 995 99999999999998753 4 7899999998876666677889998888887544
No 44
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.8e-62 Score=478.37 Aligned_cols=469 Identities=19% Similarity=0.239 Sum_probs=395.2
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+|+++||++|++++++ .+||+||+++++++|..|++. +++||+|.+.+||..+++++++|.+|+|+++|.-
T Consensus 37 ~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 37 HAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred HHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhc
Confidence 3589999999999988 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc-eEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
-|.+...+|.+....+.|+++|.+... ..+...+++..+....+.. .+.+...... ....+..+.....
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~-------~~~~~~~~~~~a~-- 178 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQH-SGFDYRPFARELVAKHPTLRHVIVAGEAEH-------PSVLEAALCHPAG-- 178 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhh-cccCcHHHHHHHHhhCCcceEEEEccCCCC-------cchhhhhhhCccc--
Confidence 899999999999999999999998753 3445555666566555553 3333211110 0111222222211
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh--HHHHHHHH
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFL 420 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~L~ 420 (693)
...+..+.+++++||...+.||||.||-|..+|....-+++...+.+++++.+++++..|..|.+.+ -.+++.++
T Consensus 179 ---~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~ 255 (542)
T COG1021 179 ---LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFL 255 (542)
T ss_pred ---cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheee
Confidence 1122345577899999999999999999999999988888878888999999999999999988776 45889999
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+++|+.+ ++++..-..+|++++||+..++|.+...|++.......+|+|||.+-+||..+++.+.++....+ +|.+
T Consensus 256 agG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~L 333 (542)
T COG1021 256 AGGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQL 333 (542)
T ss_pred eccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchH
Confidence 999999977 67888999999999999999999999999999888889999999999999999999999888766 7999
Q ss_pred ecccccccccceeccCCcCCCCccCccCCCC-CCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccccc
Q 005501 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~ 574 (693)
-+.+||.|.-++++-.......-..+-|+|+ |.-+++|+|.+|++|++|++ |+|.. .+||+. .++.
T Consensus 334 QQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~--G~LltRGPYTirGYyr------ap~H 405 (542)
T COG1021 334 QQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEV--GELLTRGPYTIRGYYR------APEH 405 (542)
T ss_pred HHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCc--ceeeecCCeeeeeecc------Cchh
Confidence 9999999987766544333333345789998 67899999999999999995 99987 355655 4457
Q ss_pred ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 575 t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
++..|..+. +|+|||++++++||+|.+.||.||||+.+|++|..+|||+.|+ .||.|.+|++|+.+|+-.| +
T Consensus 406 Na~aF~a~G------FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL-~HP~V~~AAlVampDelLG-E 477 (542)
T COG1021 406 NARAFDADG------FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLL-RHPAVHDAALVAMPDELLG-E 477 (542)
T ss_pred hhhccCcCC------ceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHh-hCchhhhhhhhcCchhhcC-c
Confidence 777888655 7999999999999999999999999999999999999999997 9999999999999999999 9
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceecC
Q 005501 655 VLVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVWC 693 (693)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~~ 693 (693)
+.|||||.++. +++..+|+++|++. |.+|.+|..+.+|
T Consensus 478 ksCAfiv~~~~-~~~~~qlr~~L~~~GlAa~K~PDrie~v 516 (542)
T COG1021 478 KSCAFIVVKEP-PLRAAQLRRFLRERGLAAFKLPDRIEFV 516 (542)
T ss_pred ceeEEEEecCC-CCCHHHHHHHHHHcchhhhcCCcceeec
Confidence 99999999874 47889999999886 8889999877653
No 45
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.2e-60 Score=535.31 Aligned_cols=474 Identities=19% Similarity=0.202 Sum_probs=376.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. ..+..+.+||+||.++++++|.+|++. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 32 ~~~~p~~~a~~~~~~--~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 109 (538)
T TIGR03208 32 VANCPDKPALTAYRD--GHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLM 109 (538)
T ss_pred HHHCCCceEEEeecc--cCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccC
Confidence 367999999986422 112234899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
|.++.+++.+++++++++++++++.+. ...............+. .+++.+.. ....|+.++......
T Consensus 110 ~~~~~~~l~~~l~~~~~~~li~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 110 PIFRERELSFMLNHADSKVFVVPSVFR-GFDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDRVLMTPERD 178 (538)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccccc-cccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHHHhhccccc
Confidence 999999999999999999999987532 11111111111122221 22222211 112333333211100
Q ss_pred CCCC---CCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHH
Q 005501 343 PRPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (693)
Q Consensus 343 ~~~~---~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (693)
..+. ........++++++|+|||||||.||||+++|+++...+......++++.+|++++++|++|..+. +.++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 258 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMP 258 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHH
Confidence 0000 011123467999999999999999999999999999888887788889999999999999998876 668899
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCC
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (693)
+..|+++++.+ ..++..+++.++++++|++.++|+++..+.........+++++|.+++||+++++++.+++.+.+ ++
T Consensus 259 l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~ 336 (538)
T TIGR03208 259 LILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GA 336 (538)
T ss_pred HHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CC
Confidence 99999998876 56789999999999999999999999988765433345678999999999999999988887766 58
Q ss_pred ceecccccccccceeccCCcCC-CCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccc
Q 005501 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (693)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~ 572 (693)
+++|.||+||++...+...... .....++|+|++|++++|+|+++++++.|+. |||++ ..||+++ +
T Consensus 337 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~~------~ 408 (538)
T TIGR03208 337 LIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET--GRLLVRGCSNFGGYLKR------P 408 (538)
T ss_pred eEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC--cEEEEecCcccccccCC------c
Confidence 8999999999986544332221 1223578999999999999999999999985 99998 3456653 2
Q ss_pred ccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCC
Q 005501 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (693)
Q Consensus 573 ~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g 652 (693)
+.++ + .+.+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.++...+
T Consensus 409 ~~~~--~------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~g 479 (538)
T TIGR03208 409 HLNS--T------DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLY-QHPAVAQVAIVAYPDERLG 479 (538)
T ss_pred cccc--c------cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHh-cCcceeeEEEEeccCCCCC
Confidence 2332 1 13459999999999999999999999999999999999999999995 9999999999999988777
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHH-HHHhhcCCCceec
Q 005501 653 PEVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNPLFKVW 692 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~-~L~~~m~P~~~v~ 692 (693)
+.++++|++.++...+.+++++++++ +|+.|++|.+++.
T Consensus 480 -~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~ 519 (538)
T TIGR03208 480 -ERACAVVVPKPGCTLDFAAMVAFLKAQKVALQYIPERLEV 519 (538)
T ss_pred -ceEEEEEEECCCCCCCHHHHHHHHHhcchhhccCCcEEEE
Confidence 89999999987767788899999996 7999999998765
No 46
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-60 Score=540.85 Aligned_cols=479 Identities=20% Similarity=0.212 Sum_probs=385.3
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++|+++|+++.+.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 25 ~~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 98 (559)
T PRK08315 25 TAARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTI 98 (559)
T ss_pred HHHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEec
Confidence 34789999999985432 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC-------------CC--ceEEEcCCCCCCCCCCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------------PL--KAIVLPAIGNDVGIPLREQ 328 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~~~~~ 328 (693)
+|.++.+++..+++.++++++++++..... .....+....... +. ..+.+... ...+
T Consensus 99 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 170 (559)
T PRK08315 99 NPAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-------KHPG 170 (559)
T ss_pred CccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeeccc-------CCcc
Confidence 999999999999999999999998753211 0000011110000 00 11111110 0112
Q ss_pred cccHHHHhcccCCCC-CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCcc
Q 005501 329 DLSWKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (693)
Q Consensus 329 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (693)
...|.++........ ...........+++++|++|||||||.||||.++|+++.+.+......++++++|+++...|+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~ 250 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLY 250 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcH
Confidence 244555543321100 0001112234578899999999999999999999999998888887888999999999999999
Q ss_pred ccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcc
Q 005501 408 WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (693)
Q Consensus 408 ~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~ 486 (693)
|..+. +.++.++..|+++++.....++..+++.++++++|++.++|+++..++........++++||.+++||++++..
T Consensus 251 ~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~ 330 (559)
T PRK08315 251 HCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIE 330 (559)
T ss_pred HHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHH
Confidence 98887 56889999999999776667889999999999999999999999988876554556788999999999999999
Q ss_pred hHHHHHhhCCCCceecccccccccceeccCCcCC--CCccCccCCCCCCceEEEECCC-CCCCCCCCCceeeEEE-----
Q 005501 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL----- 558 (693)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~ild~~-~~~~p~G~~giGel~v----- 558 (693)
+.+.+.+.++..+++|.||+||++..++...... .....++|+|++|++++|+|++ +++++.|+. |||++
T Consensus 331 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--GEl~v~g~~~ 408 (559)
T PRK08315 331 VMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQ--GELCTRGYSV 408 (559)
T ss_pred HHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCc--eEEEEECchh
Confidence 9988888876667999999999987544333221 2345789999999999999988 999999995 99998
Q ss_pred ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCccc
Q 005501 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (693)
Q Consensus 559 ~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V 638 (693)
..||++ +++.++..|.. .+||+|||+|++++||.++|+||.|++||++|++|++.|||++|. .+|+|
T Consensus 409 ~~gy~~------~~~~~~~~~~~------~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~-~~~~v 475 (559)
T PRK08315 409 MKGYWN------DPEKTAEAIDA------DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLY-THPKI 475 (559)
T ss_pred hhhhcC------ChhHHhhcCCC------CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHH-hCCCc
Confidence 457776 44455555532 339999999999999999999999999999999999999999996 99999
Q ss_pred ceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 639 LETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 639 ~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
.+++|++++++..+ +.+++||++.++...+.++++++++++||.|++|..++.+
T Consensus 476 ~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v 529 (559)
T PRK08315 476 QDVQVVGVPDEKYG-EEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFV 529 (559)
T ss_pred eEEEEEecCCCCCC-eEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEc
Confidence 99999999887766 8899999988766677889999999999999999988753
No 47
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.1e-61 Score=553.20 Aligned_cols=444 Identities=19% Similarity=0.161 Sum_probs=335.7
Q ss_pred CCCCCCcEEEEEecC-CCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+.+... ....+.++.+||+||.++++++|++|+++ +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 53 ~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 132 (660)
T PLN02861 53 VKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPL 132 (660)
T ss_pred HHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 478999999975310 00123456899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC---CceEEEcCCCCCC--C-CCCCCCcccHHHHhc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDV--G-IPLREQDLSWKDFLS 337 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~ 337 (693)
++.++.+++.+++++++++++|+++... +.+.......+ ..++.+....... . ........+|.++..
T Consensus 133 ~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02861 133 YDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSL 206 (660)
T ss_pred cCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHH
Confidence 9999999999999999999999976421 11111111111 1223332111000 0 000011245666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC-----CCCCCEEEEeCCccccchh
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-----LKVGDVYCWPTNLGWVMGP 412 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-----~~~~d~~l~~~~~~~~~~~ 412 (693)
.... . .......++|+|+|+|||||||.||||++||++++..+......++ +.++|++++++|++|.++.
T Consensus 207 ~~~~---~--~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 281 (660)
T PLN02861 207 MGSL---D--CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQ 281 (660)
T ss_pred hCcc---c--CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHH
Confidence 3221 0 1112345799999999999999999999999999887765544433 4788999999999999987
Q ss_pred HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcC-----------------------------
Q 005501 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----------------------------- 463 (693)
Q Consensus 413 ~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~----------------------------- 463 (693)
...+.+++.|+++++.+ .++..+++.|+++++|++.++|++++.|....
T Consensus 282 ~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~ 359 (660)
T PLN02861 282 VIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKG 359 (660)
T ss_pred HHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 55566899999998874 46789999999999999999999999886410
Q ss_pred cC----CC-C----------CC-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCcc
Q 005501 464 CL----EG-L----------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAF 527 (693)
Q Consensus 464 ~~----~~-~----------~l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~i 527 (693)
.. .+ . .+ .++|.+++||+++++++.+ +...++...++|+||+||+++.++..........+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsv 438 (660)
T PLN02861 360 LKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTV 438 (660)
T ss_pred CCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCc
Confidence 00 00 0 01 4799999999999998755 4445544579999999999764443322222346799
Q ss_pred CCCCCCceEEEEC--CCC-CCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEE
Q 005501 528 STATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR 599 (693)
Q Consensus 528 G~p~~~~~~~ild--~~~-~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~ 599 (693)
|+|+++++++|+| ++| ..++.+. .|||++ +.||++ +++.|++.|. +| ||+|||+|++
T Consensus 439 G~p~p~~ev~i~d~~~~g~~~~~~~~--~GEi~vrGp~v~~GY~~------~pe~T~~~f~-----dG--w~~TGDlg~~ 503 (660)
T PLN02861 439 GVPMTTIEARLESVPEMGYDALSDVP--RGEICLRGNTLFSGYHK------RQDLTEEVLI-----DG--WFHTGDIGEW 503 (660)
T ss_pred cCccCceEEEEEEccccCcccCCCCC--ceeEEEcCCcccccccC------CHHHHHhhhh-----cc--CcccCceEEE
Confidence 9999999999998 334 2334444 499988 567776 5668888884 13 9999999999
Q ss_pred ecCCcEEEEeecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEec
Q 005501 600 TVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (693)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~ 663 (693)
|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++.+ .+ +.++|+||++
T Consensus 504 d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~p~V~~a~V~G~~---~~-~~~~A~vv~~ 563 (660)
T PLN02861 504 QPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RCPLIASIWVYGNS---FE-SFLVAVVVPD 563 (660)
T ss_pred CCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cCCCeeEEEEEecC---Cc-ceeEEEEEcC
Confidence 999999999999999997 799999999999995 99999999999965 23 7899999986
No 48
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.4e-60 Score=535.89 Aligned_cols=465 Identities=18% Similarity=0.184 Sum_probs=372.0
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++...+ +.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 38 a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 38 AELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGAN 111 (546)
T ss_pred hhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCC
Confidence 4689999999875321 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+.++.+++.+++++++++++|+++...... +.....++.+.... ......|.++...... .
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~--~ 172 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGKV----------KGLGLPVIVLGEEK-------IEGAVNWKELLEAADR--A 172 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhhH----------hhcCCcEEEecCCC-------CCCcccHHHHHhhccc--c
Confidence 999999999999999999999997643211 11122233332111 1123456666554322 1
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC--CCCCCEEEEeCCccccchhH-HHHHHHHc
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (693)
..........++++++|+|||||||.||||+++|+++...+......++ ....++++...|++|.+++. .++.+|..
T Consensus 173 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~ 252 (546)
T PLN02330 173 GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRN 252 (546)
T ss_pred CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhc
Confidence 1111122345689999999999999999999999998776543221111 22346788889999988874 56788999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCc--cccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT--KIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~--~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
|+++++.+ ..++..+++.++++++|.+.++|+++..|+........+++ ++|.+++||+++++++.+++.+.+++++
T Consensus 253 g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~ 331 (546)
T PLN02330 253 KGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQ 331 (546)
T ss_pred CCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCe
Confidence 99999886 56788999999999999999999999999876443333444 4789999999999999999998888899
Q ss_pred eecccccccccceeccCCcCC----CCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCcccc
Q 005501 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~ 569 (693)
+++.||+||++.......... .....++|+|++|++++|+| ++++++|.|+. |||++ ..||++
T Consensus 332 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~--Gel~v~g~~~~~gy~~----- 404 (546)
T PLN02330 332 VQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP--GELCVRSQCVMQGYYN----- 404 (546)
T ss_pred EEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc--eEEEEecchhhhhhcc-----
Confidence 999999999976443321111 12345899999999999999 57899999985 99998 456776
Q ss_pred cccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCC
Q 005501 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (693)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~ 649 (693)
+++.++..|. .++||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. ++|+|.+++|++++++
T Consensus 405 -~~~~~~~~~~------~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~ 476 (546)
T PLN02330 405 -NKEETDRTID------EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVPLPDE 476 (546)
T ss_pred -Cccchhhhcc------CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHH-hCCchheEEEEecccc
Confidence 3445555553 2349999999999999999999999999999999999999999995 9999999999999988
Q ss_pred CCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
..+ +.++++|++.++...+.++++++++++|+.|+.|..++.
T Consensus 477 ~~g-~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~ 518 (546)
T PLN02330 477 EAG-EIPAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQF 518 (546)
T ss_pred ccC-ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEE
Confidence 777 899999999876666778999999999999999997764
No 49
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-62 Score=564.36 Aligned_cols=550 Identities=20% Similarity=0.198 Sum_probs=436.5
Q ss_pred HHcCCCchhhHHHHHHHHHHHhhccCC-ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCCC-c------c
Q 005501 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP-L------Y 85 (693)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~~-~------~ 85 (693)
.++++......+|.++++++++....+ +||++||+. +++.+.+.|+.+ .|+|+++|++++...... . .
T Consensus 68 ~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~-l~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 143 (642)
T COG1020 68 LPLRLDISGRVTFAELLARLRELALGALEHQDLPGEQ-LVERLGRERSLS---EPLFDVVFVLQNGPTAGLKLPGLRVEE 143 (642)
T ss_pred eeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHHH-HHHHHhhhccCC---CCceeeEEEecCccccccccccccccc
Confidence 345677777889999999999998888 999999999 999999999855 566999999998654431 1 1
Q ss_pred ccCCcccccccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceee--ccCCCCCC
Q 005501 86 WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSK 162 (693)
Q Consensus 86 ~~~~~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~ 162 (693)
+... ....++|+.+.+.+. ++...+ |.. ++|++.+++++..+|..++..+..++......+ +...++
T Consensus 144 ~~~~-~~~~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~-- 213 (642)
T COG1020 144 LGIE-TPAAKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSER-- 213 (642)
T ss_pred cccc-CcccccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH--
Confidence 1111 345677888877665 677777 888 999999999999999999999877666333332 222222
Q ss_pred CCCCcCCCCccchhhhhcc--CcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 005501 163 HGGTWLPGSVLNIAECCLL--PSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (693)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~--~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~ 239 (693)
..|+..........+++ +..+++.+|+++|+++.+. ++||+||+.+++++|+.|.+. ++++++|+++
T Consensus 214 --~~~~~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V~i~ 283 (642)
T COG1020 214 --EVWNALAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETVAIL 283 (642)
T ss_pred --hhccccccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Confidence 33662222222122222 2456789999999998866 999999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCC
Q 005501 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (693)
Q Consensus 240 ~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (693)
++++++++++++|++|+|++|+|+||.+|.+|+.+++++++++.+++...........+.
T Consensus 284 ~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------- 343 (642)
T COG1020 284 ADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG-------------------- 343 (642)
T ss_pred cCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--------------------
Confidence 999999999999999999999999999999999999999999999998542211000000
Q ss_pred CCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCE
Q 005501 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (693)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 399 (693)
+..+........ .........+++++|++|||||||+||||+++|+++.+.+.+....+.++.+|+
T Consensus 344 ----------~~~~~~~~~~~~----~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~ 409 (642)
T COG1020 344 ----------LALDDALSEIPD----TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDR 409 (642)
T ss_pred ----------cccccccccCCc----cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccE
Confidence 000000000000 000012345689999999999999999999999999998888888899999999
Q ss_pred EEEeCCccccchhHHHHHHHHcCCEEEEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccE
Q 005501 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRS 475 (693)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~ 475 (693)
+++..+++||.+.+++|.++++|+++++.+.. .++..+.+.++++++|++..+|+++..+...... .......+|.
T Consensus 410 ~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~ 489 (642)
T COG1020 410 VLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQ 489 (642)
T ss_pred EeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccE
Confidence 99999999999999999999999999998753 3778999999999999999999999999876221 1122235999
Q ss_pred EEeecCCCCcchHHHHHhhCC-CCceecccccccccceeccCCcCCCCc-cCccCCCCCCceEEEECCCCCCCCCCCCce
Q 005501 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (693)
Q Consensus 476 v~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~~~~~~ild~~~~~~p~G~~gi 553 (693)
+++|||+++..+...+....+ ...+.|.||+||++...+......... ..+||+|++|+.++|+|..++++|.|++
T Consensus 490 ~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~-- 567 (642)
T COG1020 490 LLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVP-- 567 (642)
T ss_pred EEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCC--
Confidence 999999999999887766544 468999999999776444333221111 5699999999999999999999999996
Q ss_pred eeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHH
Q 005501 554 GEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 628 (693)
Q Consensus 554 Gel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE 628 (693)
||+++ +.||++ ++++|+++|..+ ++|+|||++|+.+||.++|+||.|+|||++|+||+++|||
T Consensus 568 gel~i~g~~~a~gy~~------~p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie 635 (642)
T COG1020 568 GELYIAGLGLALGYLN------RPDLTAERFIAL------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIE 635 (642)
T ss_pred eeeEECCcchhhhhcC------ChhhhHHHhhhc------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHH
Confidence 88887 677777 555999999876 4999999999999999999999999999999999999999
Q ss_pred HHHhccCc
Q 005501 629 RVCDQADE 636 (693)
Q Consensus 629 ~~L~~~~p 636 (693)
+.+. ++|
T Consensus 636 ~~l~-~~~ 642 (642)
T COG1020 636 AALA-EQP 642 (642)
T ss_pred HHHh-cCC
Confidence 9994 765
No 50
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-60 Score=543.05 Aligned_cols=475 Identities=17% Similarity=0.135 Sum_probs=364.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.++ .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 47 a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 47 AARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLN 118 (600)
T ss_pred HHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 368999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
+.++.+++.+++++++++++|++++.. +....+...... ..+.+...... .....|.++.......+
T Consensus 119 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 119 TQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGAP 186 (600)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccCC
Confidence 999999999999999999999987532 112222221111 12222111100 00223444433222111
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHH-HHHHHHcC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNG 422 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G 422 (693)
...........++++++|+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|.+++.. ++.++..|
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 266 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAG 266 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcC
Confidence 11111223345789999999999999999999999999999988888899999999999999999999854 45567777
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceec
Q 005501 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (693)
+++++.+ ..++..+++.++++++|++.++|++++.++...........++|.+ +|+.+++++.+++.+.++...++|
T Consensus 267 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 267 ATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred cEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 7777765 5678899999999999999999999999887644333344567754 477899999999988887667999
Q ss_pred ccccccccceeccCCcCCCCccCccCCCCC----Cce---------EEEECCCC--CCCCCCCCceeeEEE---ecccCC
Q 005501 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATM----TAG---------LVILDECG--VPYPDDQPCVGEVGL---FPLYLG 564 (693)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~----~~~---------~~ild~~~--~~~p~G~~giGel~v---~~gy~~ 564 (693)
.||+||++..++.. ....+++|++.+ +.. ..|.|.++ .+++.|+. ||+++ .++.+.
T Consensus 344 ~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFINV----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEV--GLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeeccc----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCc--eeEEEEecCccccc
Confidence 99999998643321 123345666555 332 23444333 35788884 99874 222222
Q ss_pred CcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEE
Q 005501 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (693)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv 644 (693)
+|.++..|+..|..+++..+.+||+|||+|++++||+++|+||.||+||++|+||+|.|||++|. +||+|.+|+|+
T Consensus 418 ---GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~-~~p~V~~a~v~ 493 (600)
T PRK08279 418 ---GYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALS-GFPGVEEAVVY 493 (600)
T ss_pred ---ccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHh-cCCCcceEEEE
Confidence 22366677778877666667789999999999999999999999999999999999999999996 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 645 SVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
+++++..+....+++++..++...+.++++++|+++||.||+|..++.+
T Consensus 494 gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v 542 (600)
T PRK08279 494 GVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLV 542 (600)
T ss_pred EeecCCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEee
Confidence 9987653325566777766555678899999999999999999988753
No 51
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-60 Score=537.90 Aligned_cols=474 Identities=21% Similarity=0.246 Sum_probs=377.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 42 ~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 42 VARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred HHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 468999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCC--------------------CC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDV--------------------GI 323 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------------------~~ 323 (693)
|.++.+++.+++++++++++|+++... .....+.+.... .++.+....... ..
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVA------PTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALT 187 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhH------HHHHhhhhccccceeEeeecccccccccccccccccccccccccccc
Confidence 999999999999999999999976432 111111111111 111111000000 00
Q ss_pred CCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC-C-CCCCEEE
Q 005501 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVYC 401 (693)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~-~~~d~~l 401 (693)
....+..+|.++......... .........++++++++|||||||.||+|+++|+++...+......+. + ..+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 188 GPAPGTVPWETLVDAAIGGDG-SDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred cCCCcceeHHHHhhccccccc-cccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 001233456665543221000 001122346789999999999999999999999998877654433322 2 3468999
Q ss_pred EeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeec
Q 005501 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (693)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG 480 (693)
+..|+.|.+++ ..++.++..|+++++.+ ..+++.+++.++++++|++.++|++++.|.+.......++++||.+++||
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECC
Confidence 99999998887 45677899999999986 46788999999999999999999999999987655566788999999999
Q ss_pred CCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCC--CCCCCCCCCceeeEEE
Q 005501 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC--GVPYPDDQPCVGEVGL 558 (693)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~--~~~~p~G~~giGel~v 558 (693)
+++++++.+.+.+.+ +.++++.||+||+++.+...........+++|+|++|+.++|+|++ +++++.|.. |||++
T Consensus 346 ~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~--Gel~v 422 (573)
T PRK05605 346 MALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE--GELLV 422 (573)
T ss_pred CcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe--eEEEE
Confidence 999999988887665 5789999999999876554433333446789999999999999976 589999984 99998
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
..||++ +++.+++.|. .| ||+|||+|+++++|+++++||.||+||++|++|+|.|||++|.
T Consensus 423 ~~~~~~~gy~~------~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~- 488 (573)
T PRK05605 423 RGPQVFKGYWN------RPEETAKSFL-----DG--WFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR- 488 (573)
T ss_pred ecCchhhhhcC------ChhHhhhccc-----CC--CcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH-
Confidence 345655 4445665654 23 9999999999999999999999999999999999999999996
Q ss_pred cCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 634 ~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
.||.|.+++|++.++...+ +.++++++++++...+.++|+++++++|+.+++|..++.+
T Consensus 489 ~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~ 547 (573)
T PRK05605 489 EHPGVEDAAVVGLPREDGS-EEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHV 547 (573)
T ss_pred hCcccceEEEEeeecccCC-eEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEe
Confidence 9999999999999988777 8999999998876778899999999999999999887653
No 52
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.9e-60 Score=534.34 Aligned_cols=479 Identities=19% Similarity=0.204 Sum_probs=382.8
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 28 ~~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~ 101 (558)
T PRK12583 28 VARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNIN 101 (558)
T ss_pred HHHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecC
Confidence 3689999999885432 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc-------------CCCceEEEcCCCCCCCCCCCCCccc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------------APLKAIVLPAIGNDVGIPLREQDLS 331 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (693)
+.++.+++..++++++++++|+++..... +....+...... .+.....+..... .......
T Consensus 102 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 175 (558)
T PRK12583 102 PAYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA-----PPPGFLA 175 (558)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCC-----CCccccc
Confidence 99999999999999999999998753211 111111111110 0110011111000 0112234
Q ss_pred HHHHhcccCCCCC-CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccc
Q 005501 332 WKDFLSSVDYHPR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVM 410 (693)
Q Consensus 332 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (693)
|++.......... ..........++++++++|||||||.||||.++|+++.+.+......++++++|+++...|++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 255 (558)
T PRK12583 176 WHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCF 255 (558)
T ss_pred hHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 5544332211000 000111234578899999999999999999999999988888777788999999999999999999
Q ss_pred hh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHH
Q 005501 411 GP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDL 489 (693)
Q Consensus 411 ~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~ 489 (693)
+. +.++.++..|++++++....++..+++.++++++|++.++|+++..++........+++++|.+++||+++++.+.+
T Consensus 256 g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~ 335 (558)
T PRK12583 256 GMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMR 335 (558)
T ss_pred hHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHH
Confidence 87 66788899999998876667888999999999999999999999888876544556688999999999999999999
Q ss_pred HHHhhCCCCceecccccccccceeccCCcC--CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----eccc
Q 005501 490 WLSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLY 562 (693)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy 562 (693)
++.+.++...+++.||+||++.+.+..... ......++|+|++++.++|+|+++++++.|+. |||++ ..||
T Consensus 336 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy 413 (558)
T PRK12583 336 RVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEI--GELCTRGYSVMKGY 413 (558)
T ss_pred HHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCe--eEEEEEeCccchhh
Confidence 998888777899999999999765543321 12345789999999999999999999999984 99998 3566
Q ss_pred CCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeE
Q 005501 563 LGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETA 642 (693)
Q Consensus 563 ~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~ 642 (693)
++ +++.+...|.. .+||+|||+|++++||++++.||+||+||++|.+|+|.|||++|. .||+|.+++
T Consensus 414 ~~------~~~~~~~~~~~------~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~ 480 (558)
T PRK12583 414 WN------NPEATAESIDE------DGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF-THPAVADVQ 480 (558)
T ss_pred cC------ChHHHHhhcCC------CCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHH-hCCCeeEEE
Confidence 65 33455544532 349999999999999999999999999999999999999999996 899999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 643 AISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 643 Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|++++++..+ +.++++++..++...+..+++++++++||.++.|..++.
T Consensus 481 v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~ 529 (558)
T PRK12583 481 VFGVPDEKYG-EEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRF 529 (558)
T ss_pred EEeeecCCCC-cEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEE
Confidence 9999987776 899999998876667778999999999999999998764
No 53
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-60 Score=526.88 Aligned_cols=455 Identities=19% Similarity=0.173 Sum_probs=377.2
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||.||.++++++|.+|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 83 (497)
T PRK06145 12 ARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPIN 83 (497)
T ss_pred HHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 468999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+.++.+++..+++++++++++++...... .. .....+.++.... ..+..+......
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~--- 139 (497)
T PRK06145 84 YRLAADEVAYILGDAGAKLLLVDEEFDAI----------VA-LETPKIVIDAAAQ----------ADSRRLAQGGLE--- 139 (497)
T ss_pred cccCHHHHHHHHHhcCCcEEEEccchhhh----------hh-cccceEEecCccc----------chhHHHhccCCC---
Confidence 99999999999999999999998753211 00 0111122211000 011111111000
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCC
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~ 423 (693)
........++++++++|||||||.||||+++|+++..........+++..+++++...|+.|.+++ +..+.+++.|+
T Consensus 140 --~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~ 217 (497)
T PRK06145 140 --IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGG 217 (497)
T ss_pred --CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccC
Confidence 011123467899999999999999999999999988766666677889999999999999999887 44577899999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++++.+ ..++..+++.++++++|++.++|+++..++........+++++|.+++|||+++..+.+++.+.+++.++++.
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~ 296 (497)
T PRK06145 218 TLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDA 296 (497)
T ss_pred EEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEe
Confidence 998876 4678899999999999999999999999987755555667899999999999999999999988888899999
Q ss_pred cccccccceeccCCc-CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 504 CGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 504 YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
||+||++...+.... ......+++|+|+++++++|+|++++++|.|+. |||++ ..||++ +++.+++
T Consensus 297 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~Gy~~------~~~~~~~ 368 (497)
T PRK06145 297 YGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMK--GEICMRGPKVTKGYWK------DPEKTAE 368 (497)
T ss_pred ecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCc--eEEEEECcchhhhhcC------ChHHHHH
Confidence 999999875443322 122345689999999999999999999999984 99998 457776 4456666
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.|.. .||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .+|+|.+++|++.+++..+ +.++
T Consensus 369 ~~~~-------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 439 (497)
T PRK06145 369 AFYG-------DWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIY-ELPEVAEAAVIGVHDDRWG-ERIT 439 (497)
T ss_pred HHhC-------CCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEecCCCccC-ceEE
Confidence 6642 39999999999999999999999999999999999999999995 9999999999999888777 8899
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+++++.++...+.++|+++++++|+.|+.|..++.
T Consensus 440 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 474 (497)
T PRK06145 440 AVVVLNPGATLTLEALDRHCRQRLASFKVPRQLKV 474 (497)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEEEE
Confidence 99999876667788999999999999999988765
No 54
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-60 Score=532.39 Aligned_cols=486 Identities=19% Similarity=0.199 Sum_probs=375.9
Q ss_pred CCcCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC
Q 005501 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243 (693)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s 243 (693)
++|......+....++... ++++|+++|+++.+.. +.+||+||.++++++|++|.+. +++||+|+|+++|+
T Consensus 7 ~~~~~~~~~~~l~~~l~~~--a~~~p~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~ 78 (534)
T PRK05852 7 AAPMASDFGPRIADLVEVA--ATRLPEAPALVVTADR------IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSN 78 (534)
T ss_pred ccchhhhhcccHHHHHHHH--HHhCCCCcEEEecCCC------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence 3454444444344445443 3689999999875431 3799999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCC
Q 005501 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (693)
Q Consensus 244 ~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (693)
+++++++|||+++|++++|++|.++.+++.+++++++++++|++........ .. ... .....+.+......
T Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~--- 149 (534)
T PRK05852 79 AEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-EP----TTR-WWPLTVNVGGDSGP--- 149 (534)
T ss_pred HHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-cc----ccc-ccceeeeecccccc---
Confidence 9999999999999999999999999999999999999999999864221000 00 000 00011111110000
Q ss_pred CCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEe
Q 005501 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWP 403 (693)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~ 403 (693)
....... ........ . ..........+++++|+|||||||.||||+++|+++.+.+......+++..+|+++++
T Consensus 150 --~~~~~~~-~~~~~~~~--~-~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 223 (534)
T PRK05852 150 --SGGTLSV-HLDAATEP--T-PATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAV 223 (534)
T ss_pred --ccccccc-ccccccCC--C-ccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEe
Confidence 0000000 00000000 0 0001111224778999999999999999999999999888888788899999999999
Q ss_pred CCccccchh-HHHHHHHHcCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCC--CCCCccccEEEee
Q 005501 404 TNLGWVMGP-VILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFAST 479 (693)
Q Consensus 404 ~~~~~~~~~-~~~~~~L~~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~lr~v~~g 479 (693)
.|+.|..++ ..++.+++.|+++++.+. ..++..+++.|+++++|.+.++|+++..|.+..... ..+++++|.++++
T Consensus 224 ~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 303 (534)
T PRK05852 224 MPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSC 303 (534)
T ss_pred cCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEEC
Confidence 999999988 457888899999888653 456789999999999999999999999998754321 2346799999999
Q ss_pred cCCCCcchHHHHHhhCCCCceecccccccccceeccCCcC-------CCCccCccCCCCCCceEEEECCCCCCCCCCCCc
Q 005501 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (693)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~g 552 (693)
|+++++.+.+++.+.+ +.++++.||+||++...+..... .....+..|+ .+|++++|+|++|++++.|+.
T Consensus 304 G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~~~~~g~~- 380 (534)
T PRK05852 304 SAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGLPLPAGAV- 380 (534)
T ss_pred CCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCCCCCCCCc-
Confidence 9999999999988776 58899999999998654432221 0112234444 799999999999999999985
Q ss_pred eeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 553 iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
|||++ ..||++ +++.|++.|.. | ||+|||+|++|+||++++.||.||+||++|.+|+|.||
T Consensus 381 -Gel~v~g~~v~~gY~~------~~~~t~~~~~~-----g--~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~i 446 (534)
T PRK05852 381 -GEVWLRGTTVVRGYLG------DPTITAANFTD-----G--WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERV 446 (534)
T ss_pred -eEEEEecCcccchhcC------CcccchhhhcC-----C--CcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHH
Confidence 99998 457776 45566666641 3 99999999999999999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|++|. .||+|.+|+|+++++...+ +.++++|+.+++...+.+++.++++++||.|++|..++.
T Consensus 447 E~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~vv~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~ 509 (534)
T PRK05852 447 EGVLA-SHPNVMEAAVFGVPDQLYG-EAVAAVIVPRESAPPTAEELVQFCRERLAAFEIPASFQE 509 (534)
T ss_pred HHHHH-hCCCeeeEEEEecCCcCcC-ceEEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEE
Confidence 99995 9999999999999988777 899999998776557789999999999999999998765
No 55
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.4e-60 Score=530.25 Aligned_cols=466 Identities=18% Similarity=0.207 Sum_probs=375.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. ++||+||.++++++|.+|.+. +++|++|+++++|++++++++|||+++|+++++++
T Consensus 33 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 104 (527)
T TIGR02275 33 AARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLAL 104 (527)
T ss_pred HHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccc
Confidence 468999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
+.++.+++..+++.+++++++++..... .........+....+. ..+.+..... ..............
T Consensus 105 ~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-- 173 (527)
T TIGR02275 105 FSHRKSELTAYAQQIEPALYIIDRAHSL-FDYDAFARQLQSKLPTLRNIIVAGQTR--------VEAELFLWLESPAE-- 173 (527)
T ss_pred cccCHHHHHHHHHhcCCcEEEEcCcccc-cchHHHHHHHHhhCCcceEEEEecCCC--------CcchhhHHhhCcCc--
Confidence 9999999999999999999999865310 0000011111111111 1111111000 00011111111111
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH--HHHHHHHc
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~ 421 (693)
........++++|+|+|||||||.||||+++|+++...+......+.++.+|++++.+|++|.+++. .++.++..
T Consensus 174 ---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 ---PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ---cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 1112244678999999999999999999999999998888777788899999999999999988874 47889999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+ ..++..+++.++++++|++.++|+++..|.+.......+++++|.+++||++++.++.+++.+.+ +.+++
T Consensus 251 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~ 328 (527)
T TIGR02275 251 GGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQ 328 (527)
T ss_pred CCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEE
Confidence 99998865 46788899999999999999999999999876555556688999999999999999999888776 58999
Q ss_pred cccccccccceeccCCcCCCCccCccCCCC-CCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccc
Q 005501 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t 575 (693)
+.||+||++.++...........+++|+|+ ++..++|+|++|++++.|+. |||++ ..||++ +++.+
T Consensus 329 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~--Gei~v~g~~~~~gY~~------~~~~~ 400 (527)
T TIGR02275 329 QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGET--GMLLTRGPYTFRGYYK------APEHN 400 (527)
T ss_pred eeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCc--eEEEecCCccchhhcC------ChhHh
Confidence 999999976543322222223446889999 58999999999999999985 99998 456766 44466
Q ss_pred cccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceE
Q 005501 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (693)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~ 655 (693)
.+.|..+ +||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+|+|++.++...+ +.
T Consensus 401 ~~~~~~d------g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~ 472 (527)
T TIGR02275 401 AAAFDAE------GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLL-AHPAVHDAALVSMPDELLG-EK 472 (527)
T ss_pred HhhcCcC------CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHH-hCCCceEEEEEecCCcccc-cE
Confidence 6666533 39999999999999999999999999999999999999999995 9999999999999988777 89
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceec
Q 005501 656 LVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVW 692 (693)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~ 692 (693)
+++||+++++ ..+..+|+++++++ |+.|+.|..++.
T Consensus 473 ~~a~vv~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~ 509 (527)
T TIGR02275 473 SCAFIVVRDP-ALKAAQLRRFLRERGLAEYKLPDRVEF 509 (527)
T ss_pred EEEEEEECCC-CCCHHHHHHHHHhCCCccccCCCEEEE
Confidence 9999998765 46778999999985 999999988765
No 56
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-60 Score=566.86 Aligned_cols=462 Identities=15% Similarity=0.108 Sum_probs=352.2
Q ss_pred ccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 184 NHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 184 ~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
.+++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|
T Consensus 455 ~~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vp 526 (994)
T PRK07868 455 EQARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVL 526 (994)
T ss_pred HHHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 35678999999998766 999999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCC--CCcccHHHHhcccC
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR--EQDLSWKDFLSSVD 340 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 340 (693)
+||. +++.++++++++++||++.... ..+.+ ....++++..... ...... .....+++......
T Consensus 527 l~p~---~~l~~il~~s~~~~li~~~~~~---------~~~~~-~~~~iiv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 592 (994)
T PRK07868 527 MPPD---TDLAAAVRLGGVTEIITDPTNL---------EAARQ-LPGRVLVLGGGES-RDLDLPDDADVIDMEKIDPDAV 592 (994)
T ss_pred eCCc---hhHHHHHhccCCeEEEEChHHH---------HHHHh-cCceEEEecCCcc-ccccCCcchhhhhhhhcCcccc
Confidence 9985 6899999999999999986432 11111 2233444432110 000000 00111111111000
Q ss_pred CCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHH
Q 005501 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (693)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (693)
. .+.........++|+|||+|| ||||.||++.++|.+...........++++++|++++.+|++|+++++..+.+++
T Consensus 593 ~--~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l 669 (994)
T PRK07868 593 E--LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAV 669 (994)
T ss_pred c--CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHh
Confidence 0 000011112236899999999 5777788888888765444444445678899999999999999999977666666
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|++.+++....+++.+++.|++++||++.++|++++.|++.......++++||.++ |+.+++++.+++.+.++.+++
T Consensus 670 ~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l 747 (994)
T PRK07868 670 VGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHV 747 (994)
T ss_pred ccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchhe
Confidence 666655555567899999999999999999999999999876443444577899876 334899999999888877899
Q ss_pred ecccccccccceeccCCcCCCCccCccCCCCCCc-eEEEE-----------CCCC--CCCCCCCCceeeEEE-ecccCCC
Q 005501 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVIL-----------DECG--VPYPDDQPCVGEVGL-FPLYLGA 565 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~il-----------d~~~--~~~p~G~~giGel~v-~~gy~~~ 565 (693)
+|.||+||++.... .. .....+++|+|++|+ +++|. |++| ++++.|++ |||++ +++|++
T Consensus 748 ~~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~--Gel~~~~~~~~~- 821 (994)
T PRK07868 748 VEFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEV--GVLLARARGPID- 821 (994)
T ss_pred eeeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCc--eEEEEecCCCCC-
Confidence 99999999875432 21 123557899999998 56553 5566 66888885 99998 455542
Q ss_pred ccccccccc--ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEE
Q 005501 566 SDRLLNADH--EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (693)
Q Consensus 566 ~~~~~~~~~--t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~V 643 (693)
++. +..+|. ++++||+|||+|++|+||+|+|+||.|||||++|.+|+|.|||++|. +||+|.+|+|
T Consensus 822 ------p~~t~~~~~~~-----~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~-~hp~V~~aaV 889 (994)
T PRK07868 822 ------PTASVKRGVFA-----PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG-RIGGVDLAVT 889 (994)
T ss_pred ------hhhhhHhcccc-----cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh-cCCCeeEEEE
Confidence 222 223342 25679999999999999999999999999999999999999999995 9999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceecC
Q 005501 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
++++++. + +.++|||+++++...+.++|+++|++ ||.||+|..++++
T Consensus 890 vg~~d~~-~-~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v 936 (994)
T PRK07868 890 YGVEVGG-R-QLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVV 936 (994)
T ss_pred EeecCCC-C-ceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEe
Confidence 9998865 4 78999999988777888999999986 9999999988753
No 57
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-60 Score=543.54 Aligned_cols=465 Identities=20% Similarity=0.187 Sum_probs=357.3
Q ss_pred CCCCCCcEEEEEecCCC-CCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec-
Q 005501 186 RRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI- 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl- 263 (693)
++++|+++|+++.+... ..+.++.+||+||.++++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+
T Consensus 44 ~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 44 IANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred HHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecC
Confidence 36789999999754210 1123458999999999999999998769999999999999999999999999999999999
Q ss_pred CCCCC--HHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC----CceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 264 ADSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 264 ~p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
++.++ .+++.+++++++++++|+++... +.+.......+ ..++.+.... .
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~~------------------~ 179 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAA------EAVEGFLRNLPRLRRPRVIAIDAIP------------------D 179 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHH------HHHHHHHhhcccccCceEEEecccc------------------c
Confidence 68877 88999999999999999986532 11111111111 1122221100 0
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC-CCCCCEEEEeCCccccchhHHHH
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILF 416 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~ 416 (693)
... .........+++++||+|||||||+||||+++|+++.+.+......++ +.+++++++++|++|+.++..++
T Consensus 180 ~~~-----~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~ 254 (612)
T PRK12476 180 SAG-----ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIG 254 (612)
T ss_pred ccc-----ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHH
Confidence 000 011112345689999999999999999999999999877766666677 78899999999999999997777
Q ss_pred HHHHcCCEEEEecC-CC--ChhhHHHHHH--HcCCcEEeechHHHHHHHhcCc----CCCCCCccccEEEeecCCCCcch
Q 005501 417 SSFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDD 487 (693)
Q Consensus 417 ~~L~~G~~lvi~~~-~~--~~~~~~~~i~--~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~lr~v~~gGe~l~~~~ 487 (693)
.+++.|+++++..+ .+ ++..+++.++ ++++|++..+|+++..++.... ....+++++| +++||+++++++
T Consensus 255 ~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~ 333 (612)
T PRK12476 255 FPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDA 333 (612)
T ss_pred HHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHH
Confidence 77777887777653 22 6788999995 5899999999999887775321 1234678999 999999999999
Q ss_pred HHHHHhhCC-----CCceecccccccccceeccCCcCCC--------------------------CccCccCCCCCCceE
Q 005501 488 DLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGL 536 (693)
Q Consensus 488 ~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~~ 536 (693)
.+++.+.++ ...++|.||+||++..++...+... ...+++|+|++|+++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v 413 (612)
T PRK12476 334 VTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWA 413 (612)
T ss_pred HHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEE
Confidence 888887652 2459999999998765433221100 012478999999999
Q ss_pred EEECCC-CCCCCCCCCceeeEEE-----ecccCCCccccccccccccccccccc------------CCCceeeeecceEE
Q 005501 537 VILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM------------YKGMCLRRHGDIIK 598 (693)
Q Consensus 537 ~ild~~-~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~------------~~g~~~yrTGDl~~ 598 (693)
+|+|++ |+++|.|+. |||++ +.||++ +++.|++.|...+. .++.+||+|||+|+
T Consensus 414 ~ivd~~~g~~~~~g~~--GEl~v~g~~v~~GY~~------~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~ 485 (612)
T PRK12476 414 VIVDPDTGAELPDGEV--GEIWLHGDNIGRGYWG------RPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGV 485 (612)
T ss_pred EEEeCCCCcCCCCCCE--EEEEEcCCcccccccC------ChHHHHHHHhhhhccccccccccccccCCCCeeeccccce
Confidence 999988 999999994 99998 457776 55678888853110 12356999999999
Q ss_pred EecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccce--eEEEeecCCCCCceEEEEEEEecCCC-CCChHHHHH
Q 005501 599 RTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKM 675 (693)
Q Consensus 599 ~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~--a~Vv~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~ 675 (693)
++ ||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|++++++. + +.++++|+++++. ..+.++|.+
T Consensus 486 ~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~ 562 (612)
T PRK12476 486 YL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-N-ERLVIVAERAAGTSRADPAPAID 562 (612)
T ss_pred eE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-c-ceEEEEEEecCCcccccHHHHHH
Confidence 85 999999999999999999999999999999535899999 6777887776 5 8999999988764 357789999
Q ss_pred HHHHHHHh-hcC-CCcee
Q 005501 676 IFSKAIQS-KLN-PLFKV 691 (693)
Q Consensus 676 ~l~~~L~~-~m~-P~~~v 691 (693)
+++++|.. +++ |..+.
T Consensus 563 ~~~~~l~~~~~~~p~~v~ 580 (612)
T PRK12476 563 AIRAAVSRRHGLAVADVR 580 (612)
T ss_pred HHHHHHHHhhCCcceEEE
Confidence 99999995 776 55443
No 58
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7.2e-60 Score=530.77 Aligned_cols=461 Identities=19% Similarity=0.204 Sum_probs=373.3
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++.+|+++|+++.+. .+||+||.++++++|..|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 30 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl 101 (542)
T PRK06155 30 QAERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPI 101 (542)
T ss_pred HHHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEe
Confidence 3478999999998776 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC-C-CceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
++.++.+++..+++++++++++++..... .+....... . ...+.++.... .. ....|.........
T Consensus 102 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~ 169 (542)
T PRK06155 102 NTALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLPLPAVWLLDAPAS---VS---VPAGWSTAPLPPLD 169 (542)
T ss_pred ccccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccCcceEEEecCccc---cc---cccccchhhhcccC
Confidence 99999999999999999999999875321 111111111 1 12222221110 00 00111111000000
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
.........++++++|+|||||||.||||+++|+++.+........+++++++++++..|++|..++..++.+++.
T Consensus 170 ----~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~ 245 (542)
T PRK06155 170 ----APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLA 245 (542)
T ss_pred ----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHc
Confidence 0111223457899999999999999999999999998877777778899999999999999999999888999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++.+.+++.+.+ +.+++
T Consensus 246 G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~ 321 (542)
T PRK06155 246 GATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLL 321 (542)
T ss_pred CceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEE
Confidence 99998876 46789999999999999999999999999877655555567899887666 4677777777765 57899
Q ss_pred cccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe--------cccCCCcccccccc
Q 005501 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF--------PLYLGASDRLLNAD 573 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~--------~gy~~~~~~~~~~~ 573 (693)
|.||+||++.++.... .....+++|.|+++++++|+|++++++|.|+. |||++. .||++ +++
T Consensus 322 ~~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gei~v~~~~~~~~~~GY~~------~~~ 391 (542)
T PRK06155 322 DGYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPDGEP--GELLLRADEPFAFATGYFG------MPE 391 (542)
T ss_pred eeecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEEecCCccccchhhcC------CHH
Confidence 9999999987654432 23456789999999999999999999999984 999883 34554 344
Q ss_pred cccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCc
Q 005501 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (693)
Q Consensus 574 ~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~ 653 (693)
.++..|. ..||+|||+|++++||+++|+||.||+||++|.+|+|.|||++|. +||+|.+++|+++++...+
T Consensus 392 ~~~~~~~-------~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~v~~~~~~- 462 (542)
T PRK06155 392 KTVEAWR-------NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLL-SHPAVAAAAVFPVPSELGE- 462 (542)
T ss_pred HHHHhhc-------CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeecccccC-
Confidence 5555553 239999999999999999999999999999999999999999995 9999999999999987776
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+.++++++++.+...+..+++++|+++|+.|++|..++.
T Consensus 463 ~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~ 501 (542)
T PRK06155 463 DEVMAAVVLRDGTALEPVALVRHCEPRLAYFAVPRYVEF 501 (542)
T ss_pred ceEEEEEEECCCCCCCHHHHHHHHHhhCcCccCCcEEEE
Confidence 889999998887778889999999999999999998764
No 59
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1e-60 Score=535.86 Aligned_cols=446 Identities=17% Similarity=0.132 Sum_probs=342.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
++++|+++|+++.+. +.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++|++++ ++|
T Consensus 12 ~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~ 85 (525)
T PRK05851 12 MTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILP 85 (525)
T ss_pred hcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCC
Confidence 478999999998753 2356999999999999999999987 8999999999999999999999999999875 444
Q ss_pred C--------CCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 266 S--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 266 ~--------~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
. ...+++.+++++++++++|++.... ..+.... .. +.+. .+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~-~~-~~~~---------------~~~~~~~ 139 (525)
T PRK05851 86 GPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAVD-SS-VTVH---------------DLATAAH 139 (525)
T ss_pred CCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHhh-cc-cccc---------------ccccccc
Confidence 2 2335666789999999999986421 1111100 00 0000 0000000
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCC-CCCEEEEeCCccccchhHHHH
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVILF 416 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~ 416 (693)
... .. ......+++++||+|||||||.||||+++|+++.+.+.+....++++ ++|++++++|++|+++++.++
T Consensus 140 ~~~----~~--~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 213 (525)
T PRK05851 140 TNR----SA--SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLL 213 (525)
T ss_pred ccc----cc--cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHH
Confidence 000 00 01123578999999999999999999999999999888887888898 899999999999999998899
Q ss_pred HHHHcCCEEEEecCC-C--ChhhHHHHHHHcCCcEEeechHHHHHHHhcCc-CCCCCCccccEEEeecCCCCcchHHHHH
Q 005501 417 SSFLNGATLALYQGS-P--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-LEGLDWTKIRSFASTGETSNVDDDLWLS 492 (693)
Q Consensus 417 ~~L~~G~~lvi~~~~-~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~-~~~~~l~~lr~v~~gGe~l~~~~~~~~~ 492 (693)
.+++.|+++++.+.. + ++..+++.++++++|++..+|.++..+.+... ....++++||.+++||+++++++.+++.
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 293 (525)
T PRK05851 214 TAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFA 293 (525)
T ss_pred HHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHH
Confidence 999999999997631 2 56789999999999988665555555543221 2344578999999999999999988877
Q ss_pred hhC-----CCCceecccccccccceeccCCcC--------------CCCccCccCCCCCCceEEEECCCC-CCCCCCCCc
Q 005501 493 SKA-----WYNAIIESCGGTELSSAYIQGSLL--------------QPQAFGAFSTATMTAGLVILDECG-VPYPDDQPC 552 (693)
Q Consensus 493 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~~~~~~ild~~~-~~~p~G~~g 552 (693)
+.+ +..+++|.||+||++..++...+. .....+++|+|++|++++|+|+++ .++|.|+
T Consensus 294 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~-- 371 (525)
T PRK05851 294 TAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGRE-- 371 (525)
T ss_pred HHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCC--
Confidence 542 224599999999998655433211 012346899999999999999876 4689998
Q ss_pred eeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 553 iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
+|||++ +.||++++. . ..++||+|||+|+++ ||+|+|+||+||+||++|+||+|.||
T Consensus 372 ~GEl~v~g~~~~~GY~~~~~------~-----------~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 372 IGEIEIRGASMMSGYLGQAP------I-----------DPDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred eEEEEEecCchhhccccCCc------c-----------CCCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHH
Confidence 499998 356665321 1 123499999999996 89999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhh--cCCCceec
Q 005501 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK--LNPLFKVW 692 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~--m~P~~~v~ 692 (693)
|++|. +||+|.+|+|++++++..+ +.++++|+... ...+.++++++++++|+.+ |+|..+.+
T Consensus 434 E~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~ 497 (525)
T PRK05851 434 ERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVF 497 (525)
T ss_pred HHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEE
Confidence 99995 9999999999999987776 67777776542 1245578999999999998 89987654
No 60
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-60 Score=528.74 Aligned_cols=467 Identities=21% Similarity=0.216 Sum_probs=390.4
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++.+|+++|+.+.++ .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 15 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~ 86 (521)
T PRK06187 15 GARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPI 86 (521)
T ss_pred HHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEec
Confidence 4578999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
++.++.+++..+++.+++++++++.... ..+..+.+..+. +++.+...... ........+.++......
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 87 NIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEYEELLAAASD 157 (521)
T ss_pred ccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCCccEEEEecCcccc---ccccccccHHHHhhcCCc
Confidence 9999999999999999999999997532 222333333322 23333222110 112234556666544322
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
........++++++++|||||||.||+|.++|+++.+...+....++++++|++++.+|++|..++...+.++..
T Consensus 158 -----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 -----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred -----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 112234467899999999999999999999999999888888788999999999999999999998777779999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++++.. ++..+++.++++++|.+.++|++++.|.........+++++|.+++|||+++.++.+++.+.+ +++++
T Consensus 233 G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~ 310 (521)
T PRK06187 233 GAKQVIPRRF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLV 310 (521)
T ss_pred CCEEEecCCC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchh
Confidence 9999998864 888999999999999999999999999987665566788999999999999999999998877 78999
Q ss_pred cccccccccceeccCCcCCC-----CccCccCCCCCCceEEEECCCCCCCCC--CCCceeeEEE-----ecccCCCcccc
Q 005501 502 ESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGVPYPD--DQPCVGEVGL-----FPLYLGASDRL 569 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~~~~~~ild~~~~~~p~--G~~giGel~v-----~~gy~~~~~~~ 569 (693)
|.||+||++........... ....++|+|++++.++|+|++++++|. |. .|||++ ..||++
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~--~Gel~v~~~~~~~~y~~----- 383 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGE--VGEIIVRGPWLMQGYWN----- 383 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCC--eeEEEEECcchhhhhcC-----
Confidence 99999999875554433222 256789999999999999999999998 77 499998 345555
Q ss_pred cccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCC
Q 005501 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (693)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~ 649 (693)
+++.+...|. .+ ||+|||++++++||.+++.||.||+||++|.+|+|.+||++|. .+|+|.+++|++.+++
T Consensus 384 -~~~~~~~~~~-----~~--~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~ 454 (521)
T PRK06187 384 -RPEATAETID-----GG--WLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALY-GHPAVAEVAVIGVPDE 454 (521)
T ss_pred -CHHHHHHHhh-----CC--ceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHH-hCCCceEEEEEeccCC
Confidence 3334554553 23 9999999999999999999999999999999999999999995 9999999999999887
Q ss_pred CCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
..+ +.++++++++++...+..+++++++++|+.++.|..++.
T Consensus 455 ~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~ 496 (521)
T PRK06187 455 KWG-ERPVAVVVLKPGATLDAKELRAFLRGRLAKFKLPKRIAF 496 (521)
T ss_pred CcC-ceEEEEEEECCCCCCCHHHHHHHHHHhccCCCCceEEEE
Confidence 777 899999999887767889999999999999999998875
No 61
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-59 Score=529.33 Aligned_cols=470 Identities=19% Similarity=0.216 Sum_probs=371.4
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
..+|+.+++.+... +..+.+||.||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 96 (539)
T PRK07008 21 RHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINP 96 (539)
T ss_pred hhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 57788888765322 1234899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
.++.+++..+++++++++++++..+. +....+...... .++.+..... .... .....+++++......
T Consensus 97 ~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~-- 166 (539)
T PRK07008 97 RLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPNVKGWVAMTDAAH-LPAG-STPLLCYETLVGAQDG-- 166 (539)
T ss_pred ccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCCceEEEEEccCCc-cccC-CcccccHHHHhcccCC--
Confidence 99999999999999999999987532 112222222221 1222221111 0000 1124556666543221
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHH--HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
........++++++++|||||||.||||+++|++++... ......+++.++|+++...|++|.++...++.++..
T Consensus 167 ---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (539)
T PRK07008 167 ---DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLT 243 (539)
T ss_pred ---CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhc
Confidence 111223456889999999999999999999999976432 233346778899999999999888777666788999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+...++..+++.++++++|++.++|+++..|++.......++++||.+++||+++++.+.+++.+.+ +.+++
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~ 322 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVI 322 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCcee
Confidence 99999987667889999999999999999999999999876555556788999999999999999999887776 68999
Q ss_pred cccccccccceeccCCcC------CC----CccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCCc
Q 005501 502 ESCGGTELSSAYIQGSLL------QP----QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGAS 566 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~~ 566 (693)
+.||+||++...+..... .. ....++|+|++|++++|+|++++++|.+...+|||++. .||++.+
T Consensus 323 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~ 402 (539)
T PRK07008 323 HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGD 402 (539)
T ss_pred cccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCCh
Confidence 999999998644332211 00 11357899999999999999999998643225999983 4566532
Q ss_pred ccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEee
Q 005501 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (693)
Q Consensus 567 ~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~ 646 (693)
. .++..| ||+|||+|++++||++++.||+||+||++|++|+|.|||++|. .||+|.+++|+++
T Consensus 403 ~--------------~~~~~g--~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~v~~~~v~~~ 465 (539)
T PRK07008 403 A--------------SPLVDG--WFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV-AHPAVAEAACIAC 465 (539)
T ss_pred h--------------hhhcCC--CcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH-hCCceeEEEEEec
Confidence 1 122223 9999999999999999999999999999999999999999995 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++...+ +.++++|+..++...+.++++++++++|+.|+.|..++.
T Consensus 466 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 510 (539)
T PRK07008 466 AHPKWD-ERPLLVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVF 510 (539)
T ss_pred CCchhc-cceEEEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEE
Confidence 987777 889999998876667788999999999999999998764
No 62
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-60 Score=530.37 Aligned_cols=461 Identities=21% Similarity=0.207 Sum_probs=373.2
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. ++||+||.++++++|+.|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 88 (528)
T PRK07470 17 ARRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTN 88 (528)
T ss_pred HHHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecC
Confidence 368999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
+.++.+++..+++++++++++++..... ....+.+.... .++.+... ....++.++......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~- 152 (528)
T PRK07470 89 FRQTPDEVAYLAEASGARAMICHADFPE------HAAAVRAASPDLTHVVAIGGA---------RAGLDYEALVARHLG- 152 (528)
T ss_pred ccCCHHHHHHHHHhcCceEEEEcchhHH------HHHHHHhhCCcCceEEEeCCC---------cccccHHHHHhcCCC-
Confidence 9999999999999999999999875321 11111111111 12222110 012355665543221
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh--cCCCCCCEEEEeCCccccchhHHHHHHHH
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (693)
.........++++++|+|||||||.||||+++|+++...+...... .+++.+|+++.+.|++|++++..++ .++
T Consensus 153 ---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~ 228 (528)
T PRK07470 153 ---ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVA 228 (528)
T ss_pred ---CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHh
Confidence 1112233467899999999999999999999999986554433222 2567889999999999999986654 678
Q ss_pred cCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 421 ~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
.|++.++++. ..+++.+++.|+++++|++.++|++++.+.+.......+++++|.+++||+++++....++.+.+ +..
T Consensus 229 ~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~ 307 (528)
T PRK07470 229 RGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKV 307 (528)
T ss_pred cCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcH
Confidence 8888877753 45788999999999999999999999999877555556788999999999999999888877665 468
Q ss_pred eecccccccccceeccCCcC-------CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcc
Q 005501 500 IIESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~ 567 (693)
+++.||+||++..++..... .....+++|+|++|++++|+|++|++++.|+. |||++ ..||++
T Consensus 308 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~~~~gy~~--- 382 (528)
T PRK07470 308 LVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET--GEICVIGPAVFAGYYN--- 382 (528)
T ss_pred HHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc--eEEEEeCCccchhhcC---
Confidence 99999999998755433221 12234688999999999999999999999984 99998 456766
Q ss_pred cccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeec
Q 005501 568 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS 647 (693)
Q Consensus 568 ~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~ 647 (693)
+++.++..|. +.||+|||+|++++||+++++||.||+||++|+||+|.|||++|. .+|+|.+|+|++.+
T Consensus 383 ---~~~~~~~~~~-------~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~ 451 (528)
T PRK07470 383 ---NPEANAKAFR-------DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLL-THPAVSEVAVLGVP 451 (528)
T ss_pred ---CHHHHHhhhc-------CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHH-hCCCceEEEEEecc
Confidence 3445555553 239999999999999999999999999999999999999999995 99999999999999
Q ss_pred CCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 648 PAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 648 ~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++..+ +.++++++..++...+.++++++|+++||.|++|..++.
T Consensus 452 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~P~~~~~ 495 (528)
T PRK07470 452 DPVWG-EVGVAVCVARDGAPVDEAELLAWLDGKVARYKLPKRFFF 495 (528)
T ss_pred CcccC-ceeEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCcEEEE
Confidence 88777 889999998877667889999999999999999998764
No 63
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.7e-59 Score=525.98 Aligned_cols=470 Identities=17% Similarity=0.183 Sum_probs=375.7
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+.++.+||+||.++++++|++|.++ +++||+|+++++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 17 ADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcC
Confidence 478999999998653 13345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC---CCceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
|.++.+++.++++++++++++++.... +.+..+.+.. ...+++..... .......++.+.......
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVAL-----PADDGVSSFTQLKAQQPA 162 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCC-----cccccccCHHHHhccCCc
Confidence 999999999999999999999987532 2222222211 11222222110 011123345544332221
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHH
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (693)
.........++++++|+|||||||.||||+++|+++............+..++++++.+|+.|..+. ..++.++.
T Consensus 163 ----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 238 (517)
T PRK08008 163 ----TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238 (517)
T ss_pred ----cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHh
Confidence 0011223456899999999999999999999999987654433334567889999999999887655 66888999
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+++++.+ ..++..+++.++++++|++.++|++++.+............+++.+.+++ +++......+.+.+ ++++
T Consensus 239 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~ 315 (517)
T PRK08008 239 AGATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRL 315 (517)
T ss_pred cCcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeE
Confidence 999999987 56788999999999999999999999998866443333356788877754 67777777777665 6899
Q ss_pred ecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe--------cccCCCccccccc
Q 005501 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF--------PLYLGASDRLLNA 572 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~--------~gy~~~~~~~~~~ 572 (693)
++.||+||++..++...........++|+|+++++++|+|+++++++.|+. |||++. .||++ ++
T Consensus 316 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~~~gy~~------~~ 387 (517)
T PRK08008 316 LTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI--GEICIKGVPGKTIFKEYYL------DP 387 (517)
T ss_pred EeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc--ceEEEeCCCCcchhhhHhC------Ch
Confidence 999999999865554444444456789999999999999999999999995 999983 25555 55
Q ss_pred ccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCC
Q 005501 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (693)
Q Consensus 573 ~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g 652 (693)
+.+++.|..+. ||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. .||+|.+++|+++++...+
T Consensus 388 ~~~~~~~~~~g------~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~-~~~~v~~~~v~g~~~~~~~ 460 (517)
T PRK08008 388 KATAKVLEADG------WLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIA-THPKIQDIVVVGIKDSIRD 460 (517)
T ss_pred HHHhhcccCCC------CeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHH-hCCceeeEEEEccCCCCCC
Confidence 57777776432 9999999999999999999999999999999999999999995 9999999999999988776
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+.++++|+++++...+.++++++++++|+.|++|..++.
T Consensus 461 -~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~ 499 (517)
T PRK08008 461 -EAIKAFVVLNEGETLSEEEFFAFCEQNMAKFKVPSYLEI 499 (517)
T ss_pred -ceEEEEEEECCCCCCCHHHHHHHHHhhcccccCCcEEEE
Confidence 899999999987667778999999999999999998765
No 64
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-60 Score=541.83 Aligned_cols=443 Identities=15% Similarity=0.138 Sum_probs=336.5
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh---h-cCCC-----------CEEEEEcCCCHHHHHH
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT---M-FSKG-----------DAIAIDMPMTVRAVII 249 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~---~-v~~g-----------d~V~i~~~~s~~~vva 249 (693)
+++++|+++|+++... +..++.+||+||.++++++|++|.+ + +++| |+|+|+++|+++|+++
T Consensus 70 ~~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~ 146 (746)
T PTZ00342 70 KYKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVA 146 (746)
T ss_pred HHhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHH
Confidence 3478999999986422 1134689999999999999999996 6 9998 9999999999999999
Q ss_pred HHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCC------
Q 005501 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV------ 321 (693)
Q Consensus 250 ~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------ 321 (693)
.+||+++|++.||+++.++.+++.++|+++++++|+++.... +.+..+....+. .+++++......
T Consensus 147 ~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~ 220 (746)
T PTZ00342 147 DLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININK 220 (746)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCccccccccc
Confidence 999999999999999999999999999999999999976432 122222222332 234443211000
Q ss_pred -----------CCCC-------------------------------------------CCCcccHHHHhcccCCCCCCCC
Q 005501 322 -----------GIPL-------------------------------------------REQDLSWKDFLSSVDYHPRPNY 347 (693)
Q Consensus 322 -----------~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 347 (693)
.... ......|+++..... ..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~ 295 (746)
T PTZ00342 221 EEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-----TN 295 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-----cC
Confidence 0000 000011222211110 11
Q ss_pred CCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc--CCCCCCEEEEeCCccccchhHHHHHHHHcCCEE
Q 005501 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (693)
Q Consensus 348 ~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (693)
.......++|+|+|+|||||||.||||++||+|+++.+....... .....|++++++|++|.++....+.+++.|+++
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i 375 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTI 375 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEE
Confidence 112334679999999999999999999999999988776543321 233568999999999999987777889999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhc--------CcCCC------------------------------
Q 005501 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------------------ 467 (693)
Q Consensus 426 vi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~--------~~~~~------------------------------ 467 (693)
++.+. ++..+++.|+++++|++.++|.++..|... .....
T Consensus 376 ~~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ 453 (746)
T PTZ00342 376 NIWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISS 453 (746)
T ss_pred EEeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHH
Confidence 99864 678999999999999999999999988652 10000
Q ss_pred ----CCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCC-CCceEEEEC-C
Q 005501 468 ----LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILD-E 541 (693)
Q Consensus 468 ----~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~ild-~ 541 (693)
...++||.+++||+++++++.+++...+ +++++++||+||+++..+...+ .....+++|+|+ |+++++|+| +
T Consensus 454 kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d~~ 531 (746)
T PTZ00342 454 KIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRTWE 531 (746)
T ss_pred HHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEeccc
Confidence 0025899999999999999999988765 6899999999999865544333 334568999998 999999998 4
Q ss_pred CCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccc
Q 005501 542 CGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN 616 (693)
Q Consensus 542 ~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik 616 (693)
++...+.+. .|||++ +.||++ +++.|++.|..+ +||+|||+|++|+||+|+|+||+||+||
T Consensus 532 ~~~~~~~~~--~GEl~vrGp~v~~GY~~------~pe~T~~~f~~d------GW~~TGDig~~d~dG~l~i~gR~kdlIk 597 (746)
T PTZ00342 532 TYKATDTLP--KGELLIKSDSIFSGYFL------EKEQTKNAFTED------GYFKTGDIVQINKNGSLTFLDRSKGLVK 597 (746)
T ss_pred ccccCCCCC--ceEEEEecCcccccccC------ChhhhhhhcCcC------CcccCCcEEEECCCCeEEEEccCCCeEE
Confidence 334434333 389988 456766 666898888643 2999999999999999999999999999
Q ss_pred c-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 617 L-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 617 ~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+ +|++|+|.|||++|. +||.|.+|+|++... . ..++|.|+++.
T Consensus 598 ls~Ge~I~p~eIE~~l~-~~p~V~~~~VvG~~~---~-~~~~Alvv~d~ 641 (746)
T PTZ00342 598 LSQGEYIETDMLNNLYS-QISFINFCVVYGDDS---M-DGPLAIISVDK 641 (746)
T ss_pred eCCCEEEchHHHHHHHh-cCCCccEEEEEccCC---c-cccEEEEECCH
Confidence 5 799999999999995 999999999998521 1 57999999763
No 65
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.6e-59 Score=522.90 Aligned_cols=456 Identities=20% Similarity=0.213 Sum_probs=375.1
Q ss_pred CCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 005501 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (693)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~ 266 (693)
.+|+++|+.+.+. +.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 14 ~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~ 86 (504)
T PRK07514 14 ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTA 86 (504)
T ss_pred hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCC
Confidence 7899999987544 2899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc-eEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCC
Q 005501 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (693)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (693)
++.+++..+++.++++++++++... .....+....... ++.++... ...+.+......
T Consensus 87 ~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~----- 145 (504)
T PRK07514 87 YTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGAPHVETLDADG----------TGSLLEAAAAAP----- 145 (504)
T ss_pred CCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCCceEEEecCCC----------cccHHHhhhhcC-----
Confidence 9999999999999999999987532 1112221111111 22222110 111222221111
Q ss_pred CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCE
Q 005501 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (693)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (693)
.........+++++||+|||||||.||||+++|+++.+.+......++++++|++++..|+.|..++ +.++.+++.|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1122234567999999999999999999999999999888877778889999999999999998887 567889999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+ ..++..+++.+. ++|++..+|+++..++.........++++|.+++||+++++++.+++.+.+ +.++++.|
T Consensus 226 ~~~~~-~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 301 (504)
T PRK07514 226 MIFLP-KFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERY 301 (504)
T ss_pred EEECC-CCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeec
Confidence 99886 457888888883 799999999999999877555556678999999999999999998888775 57899999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCccccccccccccc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~ 578 (693)
|+||++...+. .........++|.|+++++++|+| ++++++|.|+. |||++ ..||++ +++.+++.
T Consensus 302 G~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~--Gel~i~~~~~~~gy~~------~~~~~~~~ 372 (504)
T PRK07514 302 GMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEI--GMIEVKGPNVFKGYWR------MPEKTAEE 372 (504)
T ss_pred ccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCCCCCCc--eEEEEecCCccccccC------Cchhhhhh
Confidence 99998764332 222233456899999999999999 88999999985 99998 456766 45567777
Q ss_pred ccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEE
Q 005501 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (693)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a 658 (693)
|..++ ||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .+++|.+++|+++++...+ +.+++
T Consensus 373 ~~~~~------~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~ 444 (504)
T PRK07514 373 FRADG------FFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEID-ELPGVVESAVIGVPHPDFG-EGVTA 444 (504)
T ss_pred cccCC------CeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEeCCCCCcC-ceEEE
Confidence 76432 9999999999999999999999999999999999999999995 8999999999999887777 88999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+++..++...+.++++++++++|+.+++|..++.
T Consensus 445 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 478 (504)
T PRK07514 445 VVVPKPGAALDEAAILAALKGRLARFKQPKRVFF 478 (504)
T ss_pred EEEECCCCCCCHHHHHHHHHhhcccCCCCcEEEE
Confidence 9999877667788999999999999999998764
No 66
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=8.9e-60 Score=523.83 Aligned_cols=442 Identities=21% Similarity=0.247 Sum_probs=368.7
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+|.++||++|+++.++ .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i 82 (483)
T PRK03640 11 RAFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLL 82 (483)
T ss_pred HHHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEec
Confidence 3478999999998876 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
++.++.+++..++++++++++++++..... .... ....++++......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---------~~~~---------------------~~~~~~~~~~~~~~-- 130 (483)
T PRK03640 83 NTRLSREELLWQLDDAEVKCLITDDDFEAK---------LIPG---------------------ISVKFAELMNGPKE-- 130 (483)
T ss_pred CcCCCHHHHHHHHHhCCCCEEEEcchhhHH---------Hhhh---------------------ccccHHHHhhcccc--
Confidence 999999999999999999999998743210 0000 01123333322111
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (693)
.........++++++++|||||||.||+|+++|+++...+......++++++|++++..|++|..++..++.++..|+
T Consensus 131 --~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~ 208 (483)
T PRK03640 131 --EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGM 208 (483)
T ss_pred --cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCC
Confidence 111122346789999999999999999999999998877776667789999999999999999999888899999999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++++.+ ..++..+++.++++++|++.++|+++..|....... ....+||.+++||+++++...+++.+. ++++++.
T Consensus 209 ~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 284 (483)
T PRK03640 209 RVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQS 284 (483)
T ss_pred EEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeee
Confidence 999987 467899999999999999999999999998653322 234689999999999999998887764 6889999
Q ss_pred cccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
||+||++..+...... .....+++|+|+++++++|+|+ ++++|.|+. |||++ +.||++ +++.+..
T Consensus 285 YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~g~~--Gel~v~g~~~~~gy~~------~~~~~~~ 355 (483)
T PRK03640 285 YGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD-GVVVPPFEE--GEIVVKGPNVTKGYLN------REDATRE 355 (483)
T ss_pred eccCcccccccccCcccccccCCCcccccCCcEEEEecC-CCcCCCCCc--eEEEEECcchhhhhcC------CHHHHHH
Confidence 9999987644333322 3345678999999999999986 489999995 99998 456766 3445555
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.|.. + ||+|||++++++||+++++||+||+||++|.+|++.|||+++. .+|+|.+++|++.+++..+ +.++
T Consensus 356 ~~~~-----~--~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~-~~~~v~~~~v~~~~~~~~~-~~~~ 426 (483)
T PRK03640 356 TFQD-----G--WFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLL-SHPGVAEAGVVGVPDDKWG-QVPV 426 (483)
T ss_pred HHhc-----C--CeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeCCCcccC-CceE
Confidence 5531 2 9999999999999999999999999999999999999999995 9999999999998887766 8899
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+|++..+ ..+.++++++++++|+.|++|..++.
T Consensus 427 ~~~~~~~--~~~~~~l~~~~~~~l~~~~~p~~i~~ 459 (483)
T PRK03640 427 AFVVKSG--EVTEEELRHFCEEKLAKYKVPKRFYF 459 (483)
T ss_pred EEEEeCC--CCCHHHHHHHHHHhccCCCCCcEEEE
Confidence 9888654 56778999999999999999998764
No 67
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-59 Score=527.33 Aligned_cols=468 Identities=20% Similarity=0.182 Sum_probs=384.8
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 92 (523)
T PRK08316 21 ARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVN 92 (523)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 468899999998876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+.++.+++..+++.+++++++++.... ..+....+......+....... ..........+.++......
T Consensus 93 ~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 161 (523)
T PRK08316 93 FMLTGEELAYILDHSGARAFLVDPALA------PTAEAALALLPVDTLILSLVLG--GREAPGGWLDFADWAEAGSV--- 161 (523)
T ss_pred cccCHHHHHHHHHhCCCCEEEEccchH------HHHHHHhhhcCccceeeeeccc--ccccccchhhHHHHHhcCCC---
Confidence 999999999999999999999987532 1111111111111111111100 01111223444444433221
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH-HHHHHHHcCC
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGA 423 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~ 423 (693)
.........+++++++|||||||.||+|.++|+++++.+......+++.++|+++...|+.|..++. .++.++..|+
T Consensus 162 --~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 162 --AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred --ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 1122345678999999999999999999999999988887777788999999999999999998874 4566788999
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++++.+ ..++..+++.++++++|++.++|+++..|.+.......+++++|.+++||++++.++.+.+.+.++++++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 318 (523)
T PRK08316 240 TNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNC 318 (523)
T ss_pred eEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeee
Confidence 999986 4678899999999999999999999999988765556678899999999999999999999988878899999
Q ss_pred cccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
||+||++.+.+..... .....+++|+|+++++++|+|+++++++.|+. ||+++ ..+|++ +++.++.
T Consensus 319 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gei~v~~~~~~~~y~~------~~~~~~~ 390 (523)
T PRK08316 319 YGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEV--GEIVHRSPQLMLGYWD------DPEKTAE 390 (523)
T ss_pred ecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCc--ceEEEECCchhhhhcC------CHHHHHH
Confidence 9999998755443322 22345789999999999999999999999985 99998 345665 4445665
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.|. .+||+|||+|++++||++++.||.||+||++|.+|+|.|||+.|. ++|+|.+++|++.+++..+ +.++
T Consensus 391 ~~~-------~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 461 (523)
T PRK08316 391 AFR-------GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALY-THPAVAEVAVIGLPDPKWI-EAVT 461 (523)
T ss_pred Hhh-------CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHH-hCCChheEeEecccCcccC-CeEE
Confidence 553 239999999999999999999999999999999999999999995 9999999999999988777 8999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++++++++...+.++++++++++|+.++.|..++.
T Consensus 462 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 496 (523)
T PRK08316 462 AVVVPKAGATVTEDELIAHCRARLAGFKVPKRVIF 496 (523)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEE
Confidence 99999877667778999999999999999998764
No 68
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-59 Score=531.30 Aligned_cols=470 Identities=20% Similarity=0.233 Sum_probs=359.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. ++||+||+++++++|++|.++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 24 ~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 24 SECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred HHhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeecc
Confidence 367999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC-------CCceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------PLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
|.++.+++.++++.++++++|++.+.. +....+.... ...++.++...... .......+|.++..
T Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 167 (579)
T PLN03102 96 TRLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSSEDSNLNLPVIFIHEIDFPK--RPSSEELDYECLIQ 167 (579)
T ss_pred ccCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccccccccCceEEEeccccccc--CCcccccCHHHHHh
Confidence 999999999999999999999986532 1122221111 11233333211100 00112345666554
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHH
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (693)
.................++++++|+|||||||.||||+++|+++..........+.+...+++++..|++|..++...+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 247 (579)
T PLN03102 168 RGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWG 247 (579)
T ss_pred ccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHH
Confidence 33221000000111235689999999999999999999999997544433434456677789999999999998877788
Q ss_pred HHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCC
Q 005501 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (693)
Q Consensus 418 ~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~ 497 (693)
++..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++.. + +
T Consensus 248 ~~~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g 324 (579)
T PLN03102 248 TAARGGTSVCMR-HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-G 324 (579)
T ss_pred HHHhcCcEEeec-cCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-C
Confidence 899999998886 356788999999999999999999999998764333334567888999999999988888764 3 6
Q ss_pred CceecccccccccceeccCCcCC-----C--------CccCccCCCCCCceEEEEC-CCCCCCCCC--CCceeeEEE---
Q 005501 498 NAIIESCGGTELSSAYIQGSLLQ-----P--------QAFGAFSTATMTAGLVILD-ECGVPYPDD--QPCVGEVGL--- 558 (693)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~-----~--------~~~~~iG~p~~~~~~~ild-~~~~~~p~G--~~giGel~v--- 558 (693)
.++++.||+||+++.++...... + ...+..+.|++ .+.+.| +.++++|.+ + .|||++
T Consensus 325 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~--~GEl~v~g~ 400 (579)
T PLN03102 325 FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKT--MGEIVIKGS 400 (579)
T ss_pred CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCC--ceEEEEECc
Confidence 78999999999986433221100 0 11222333444 455666 457777753 3 599998
Q ss_pred --ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCc
Q 005501 559 --FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADE 636 (693)
Q Consensus 559 --~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p 636 (693)
+.||++ +++.|++.|.. | ||+|||+|++|+||+++|.||.||+||++|++|+|.|||++|. +||
T Consensus 401 ~~~~GY~~------~~~~t~~~f~~-----g--w~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~p 466 (579)
T PLN03102 401 SIMKGYLK------NPKATSEAFKH-----G--WLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLY-KYP 466 (579)
T ss_pred chhhhhcC------ChhhhHhhhcc-----C--ceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHH-hCC
Confidence 467777 44567766642 3 9999999999999999999999999999999999999999996 999
Q ss_pred ccceeEEEeecCCCCCceEEEEEEEecCCCCC----------ChHHHHHHHHHHHHhhcCCCceecC
Q 005501 637 SILETAAISVSPAGGGPEVLVIFVVLKKGFTS----------QPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 637 ~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~----------~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
.|.+++|++++++..+ +.++|+|++.++... +..+++++++++||.|+.|..++.+
T Consensus 467 ~V~~a~vv~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~ 532 (579)
T PLN03102 467 KVLETAVVAMPHPTWG-ETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFL 532 (579)
T ss_pred CcceeEEEeccCcccc-ceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEc
Confidence 9999999999998877 899999998865432 3468999999999999999988753
No 69
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-59 Score=520.44 Aligned_cols=448 Identities=20% Similarity=0.226 Sum_probs=364.6
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++.+||++|+.+...+ +.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~a~~~p~~~a~~~~~~~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 4 HARLQPQRLAAVDLALG------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPL 77 (488)
T ss_pred hhhhCCCceEEEecCCC------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEee
Confidence 34688999999873211 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
++.++.+++.+++++++++++|+++...... .....++++......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~-- 123 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDDAVAAGR--------------------------------TDVEDLAAFIASADA-- 123 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcchhhccc--------------------------------ccccchhhhhhhccc--
Confidence 9999999999999999999999986432100 001112222211111
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH-HHHHHHHcC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNG 422 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G 422 (693)
. .........++++++++|||||||.||+|+++|+++.+.+........+..+|++++..|+.|.+++. .++.++..|
T Consensus 124 ~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g 202 (488)
T PRK09088 124 L-EPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVG 202 (488)
T ss_pred c-ccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcC
Confidence 0 00111223568899999999999999999999999988777666667788999999999999999984 466788889
Q ss_pred CEEEEecCCCChhhHHHHHH--HcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 423 ATLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~--~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
+++++.+ ..++..++..+. ++++|++..+|+++..+.+........+++||.+++||++++....+.+.+. ++++
T Consensus 203 ~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v 279 (488)
T PRK09088 203 GSILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPM 279 (488)
T ss_pred CEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCce
Confidence 9998876 456777888776 4899999999999999987654444567899999999999998887766644 6889
Q ss_pred ecccccccccceeccCCc--CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccc
Q 005501 501 IESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~ 573 (693)
++.||+||++..+..... ......+++|+|+++++++|+|+++++++.|++ |||++ ..||++ +++
T Consensus 280 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gY~~------~~~ 351 (488)
T PRK09088 280 VDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVP--GELLLRGPNLSPGYWR------RPQ 351 (488)
T ss_pred eeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCc--eEEEEECCccchhhcC------Chh
Confidence 999999999865432211 112345789999999999999999999999985 99998 356666 344
Q ss_pred cccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCc
Q 005501 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (693)
Q Consensus 574 ~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~ 653 (693)
.++..|.. ++||+|||+|++++||+++|.||.||+||++|++|+|.|||++|. .||+|.+++|++++++..|
T Consensus 352 ~~~~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g- 423 (488)
T PRK09088 352 ATARAFTG------DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLA-DHPGIRECAVVGMADAQWG- 423 (488)
T ss_pred hhhhhhcC------CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHH-hCCCcceEEEEeCCCccCC-
Confidence 56655542 349999999999999999999999999999999999999999995 9999999999999887767
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+..+++|+++++...+..+++++|+++|+.|+.|..+..
T Consensus 424 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 462 (488)
T PRK09088 424 EVGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRL 462 (488)
T ss_pred ceeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEE
Confidence 789999998876556778999999999999999988764
No 70
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.5e-60 Score=548.71 Aligned_cols=465 Identities=19% Similarity=0.214 Sum_probs=357.2
Q ss_pred cCCCCCC-cEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd-~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++|+ ++|+.+.+. +++||+||.++++++|++|++.+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 213 ~~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl 285 (718)
T PRK08043 213 AQYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMM 285 (718)
T ss_pred HHHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCccccc
Confidence 3468897 688875331 28999999999999999998768999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHH--h-ccc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDF--L-SSV 339 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 339 (693)
++.++.+++.+++++++++++|++++.....+... .....+. ..+.+..... ...+.+. . ...
T Consensus 286 ~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~ 352 (718)
T PRK08043 286 NYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQVRWVYLEDLKD---------DVTTADKLWIFAHL 352 (718)
T ss_pred ccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhccccEEEhhhhhh---------hcchhHHHHHHHHH
Confidence 99999999999999999999999876432111000 0011111 1222111000 0011110 0 000
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHH
Q 005501 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (693)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (693)
.. + ........++|+++|+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|.+++ ..++.+
T Consensus 353 ~~---~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~ 428 (718)
T PRK08043 353 LM---P-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTP 428 (718)
T ss_pred hC---C-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHH
Confidence 00 0 001123457899999999999999999999999999888877777889999999999999999987 568899
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCC
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~ 498 (693)
|..|+++++.+...++..+++.++++++|++..+|+++..+.+.. ...++++||.+++||+++++++.+.+.+.+ ++
T Consensus 429 l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~ 505 (718)
T PRK08043 429 LLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GL 505 (718)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CC
Confidence 999999999875456677889999999999999999998876642 334678999999999999999998888766 68
Q ss_pred ceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccc
Q 005501 499 AIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (693)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~ 573 (693)
++++.||+||++...+...+ .....+++|+|+||++++|+|+++. |+ .|||++ ..||++.. +++
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~----~~--~Gel~v~g~~v~~GY~~~e----~~~ 574 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI----EQ--GGRLQLKGPNIMNGYLRVE----KPG 574 (718)
T ss_pred CeecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC----CC--ceEEEEecCCccccccCCC----Ccc
Confidence 99999999999875544332 2345689999999999999997653 34 389987 45676521 111
Q ss_pred ccccccc-ccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCC
Q 005501 574 HEEVYFR-GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (693)
Q Consensus 574 ~t~~~f~-~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g 652 (693)
.+...+. ........+||+|||+|++|+||+++|.||+||+||++|++|+|.|||++|. +|+.+.+++|++.+++..+
T Consensus 575 ~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~-~~~~~~~~avv~~~~~~~g 653 (718)
T PRK08043 575 VLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLAL-GVSPDKQHATAIKSDASKG 653 (718)
T ss_pred cccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHH-hCCccceEEEEEccCCCCC
Confidence 1111111 0000112359999999999999999999999999999999999999999995 8988889999999888777
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceec
Q 005501 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVW 692 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~ 692 (693)
+.++++++ +...+.++++++++++ |+.|++|..+++
T Consensus 654 -e~~v~~~~---~~~~~~~~l~~~~~~~~l~~~~vP~~i~~ 690 (718)
T PRK08043 654 -EALVLFTT---DSELTREKLQQYAREHGVPELAVPRDIRY 690 (718)
T ss_pred -ceEEEEEc---CcccCHHHHHHHHHhcCCCcccCCceEEE
Confidence 88888875 2346778999999998 999999998765
No 71
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.5e-59 Score=528.01 Aligned_cols=472 Identities=20% Similarity=0.221 Sum_probs=370.9
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
+++++|+++|+++.+. .+||+||.++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|
T Consensus 33 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~ 104 (562)
T PRK12492 33 SCKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVN 104 (562)
T ss_pred HHHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEec
Confidence 3468999999987665 99999999999999999987 5 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEE---------------EcCCCCC----CCC
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV---------------LPAIGND----VGI 323 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~----~~~ 323 (693)
++|.++.+++.+++++++++++++++.+... ...+.......... ....... ...
T Consensus 105 ~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 105 TNPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred cCccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCceEEEeechhhccccccchhcccccccccccccc
Confidence 9999999999999999999999997643211 11111100000000 0000000 000
Q ss_pred CCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC---------C
Q 005501 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---------L 394 (693)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~---------~ 394 (693)
........|+++...... ....+.....+++++|+|||||||.||||+++|+++...+......+. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 254 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLM 254 (562)
T ss_pred cCCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccc
Confidence 000122445555433221 111123346689999999999999999999999998776655443332 2
Q ss_pred CCC-CEEEEeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCcc
Q 005501 395 KVG-DVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (693)
Q Consensus 395 ~~~-d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~ 472 (693)
..+ ++++...|+.|.++. +.++..+..|++.++.....++..+++.|+++++|++..+|+++..|++.......++++
T Consensus 255 ~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~ 334 (562)
T PRK12492 255 KEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSA 334 (562)
T ss_pred cCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccc
Confidence 333 567888999999887 456677888988887765557788999999999999999999999998775545566889
Q ss_pred ccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCc
Q 005501 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (693)
Q Consensus 473 lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~g 552 (693)
+|.+++||+++++.+.+++.+.+ ++++++.||+||++..++..........+++|+|+++++++|+|+++++++.|+.
T Consensus 335 lr~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~- 412 (562)
T PRK12492 335 LKLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGER- 412 (562)
T ss_pred eeEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCCc-
Confidence 99999999999999988887654 6899999999999876554433333345789999999999999999999999985
Q ss_pred eeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHH
Q 005501 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (693)
Q Consensus 553 iGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (693)
|||++ ..||++ +++.|.+.|.. ++||+|||+|++++||+++|.||.||+||++|++|+|.||
T Consensus 413 -Gel~v~g~~~~~gY~~------~~~~t~~~~~~------~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eI 479 (562)
T PRK12492 413 -GELCIKGPQVMKGYWQ------QPEATAEALDA------EGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEI 479 (562)
T ss_pred -eEEEEeCCcccccccc------CchhhhhcccC------CCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHH
Confidence 99998 356666 45566666642 2399999999999999999999999999999999999999
Q ss_pred HHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 628 E~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|++|. +||+|.+++|++.++...+ +.+++|+++.++ ..+.++++++++++|+.|++|..+..
T Consensus 480 E~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~ 541 (562)
T PRK12492 480 EDVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVL 541 (562)
T ss_pred HHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEE
Confidence 99996 9999999999999887777 889999987654 35678999999999999999988764
No 72
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-59 Score=528.60 Aligned_cols=461 Identities=15% Similarity=0.198 Sum_probs=353.2
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+|+++|+++|+++.+.. +.+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 23 ~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 23 QARQQPEAIALRRCDGT------SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred HHhhCCCcEEEeecCCC------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 45789999999865431 2799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
++.++.+++.++++.++++++|+++........+. ..... ...+.++..... . . +.+....
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~-------~-~-~~~~~~~----- 157 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSKMASSAVP---EALHS--IPVIAVDIAAVT-------R-E-SEHSLDA----- 157 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccchhcccccc---ccccc--cceeEeeccccc-------c-c-ccccccc-----
Confidence 99999999999999999999999976431111110 00000 011122110000 0 0 0000000
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc----hhcCCCCCCEEEEeCCccccchhHHHHHHH
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (693)
..........+++++|++|||||||.||||+++|+++.+...... ..++...+++++...|+.|+.+++..+.++
T Consensus 158 -~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l 236 (540)
T PRK05857 158 -ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCL 236 (540)
T ss_pred -cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHh
Confidence 000111234678999999999999999999999999876544321 224566788999999999999998888999
Q ss_pred HcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 420 ~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
+.|+++++.+ .++..+++.|+++++|++.++|++++.|++.......+++++|.+++||++++....+++. .+ +.+
T Consensus 237 ~~G~~~v~~~--~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~-~~-g~~ 312 (540)
T PRK05857 237 MHGGLCVTGG--ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIE-AT-GVR 312 (540)
T ss_pred hcceeEEecC--CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHH-Hh-CCe
Confidence 9999987643 4678899999999999999999999999876554556789999999999999887765543 43 689
Q ss_pred eecccccccccceeccCCcCC----CCccCccCCCCCCceEEEECCCCCC-C-----CCCCCceeeEEE-----ecccCC
Q 005501 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVP-Y-----PDDQPCVGEVGL-----FPLYLG 564 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~ild~~~~~-~-----p~G~~giGel~v-----~~gy~~ 564 (693)
+++.||+||++...+...... ....+++|+|++|++++|+|++++. + +.|+ +|||++ ..||++
T Consensus 313 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~--~Gel~v~g~~~~~GY~~ 390 (540)
T PRK05857 313 TAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSAS--FGTLWIKSPANMLGYWN 390 (540)
T ss_pred eecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCC--cceEEEeCcchhhhhhC
Confidence 999999999985433222111 1235789999999999999987763 3 3455 599998 346666
Q ss_pred CcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEE
Q 005501 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (693)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv 644 (693)
+++.|++.|. +| ||+|||+|++++||+++|.||.||+||++|++|+|.|||++|. .||+|.+|+|+
T Consensus 391 ------~~~~t~~~~~-----~g--~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~ 456 (540)
T PRK05857 391 ------NPERTAEVLI-----DG--WVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAE-GVSGVREAACY 456 (540)
T ss_pred ------CccchhhhcC-----CC--ceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHH-hCCCeeEEEEE
Confidence 4556776664 23 9999999999999999999999999999999999999999995 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCC-ChH----HHHHHHHHHHHhhcCCCceec
Q 005501 645 SVSPAGGGPEVLVIFVVLKKGFTS-QPD----KLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~-~~~----~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++++...+ +.++++++..++... ..+ .++++++++|+.|++|..+..
T Consensus 457 ~~~~~~~~-~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~ 508 (540)
T PRK05857 457 EIPDEEFG-ALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVI 508 (540)
T ss_pred ecCccccc-cceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEE
Confidence 99987766 788888887653211 123 344555677899999988764
No 73
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=5.7e-59 Score=523.24 Aligned_cols=460 Identities=18% Similarity=0.213 Sum_probs=372.9
Q ss_pred CCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCC
Q 005501 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (693)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~ 268 (693)
|+++|+++.+. ++||+||.++++++|++|.+. +++|++|+++++|++++++++|||+++|++++++++..+
T Consensus 37 p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 37 SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 99999998776 999999999999999999999 999999999999999999999999999998888777788
Q ss_pred HHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCC
Q 005501 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (693)
Q Consensus 269 ~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (693)
..++..++++++++++++++.... ...-.....+.+..+. ..+.+... .....+.++...... .
T Consensus 109 ~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 173 (536)
T PRK10946 109 RSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDDAINHPAE-----D 173 (536)
T ss_pred HHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCCceEEEEecC---------CCCccHHHHhhCccc-----c
Confidence 889999999999999999864210 0000111112221221 22222111 112234444433221 1
Q ss_pred CCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH--HHHHHHHcCCEE
Q 005501 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATL 425 (693)
Q Consensus 348 ~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~G~~l 425 (693)
.......++++++++|||||||.||||+++|+++...+......++++++|++++..|++|.+++. .++.+|..|+++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~ 253 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTV 253 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEE
Confidence 112344678999999999999999999999999999888887888999999999999999987763 578899999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhc--CcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 426 vi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~--~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++.+ ..++..+++.++++++|++.++|+++..|+.. .......++++|.+++||+++++.+.+.+.+.+ ++++++.
T Consensus 254 ~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~ 331 (536)
T PRK10946 254 VLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQV 331 (536)
T ss_pred EECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEe
Confidence 8875 45778899999999999999999999999865 222334568999999999999999988887765 6899999
Q ss_pred cccccccceeccCCcCCCCccCccCCCC-CCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
||+||+++.++...........++|+|+ +++.++|+|+++++++.|+. |||++ +.||++ +++.|.+
T Consensus 332 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~GY~~------~~~~t~~ 403 (536)
T PRK10946 332 FGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEV--GRLMTRGPYTFRGYYK------SPQHNAS 403 (536)
T ss_pred ecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCc--cEEEEecCccchhhcC------Ccccchh
Confidence 9999976544332222223457899999 79999999999999999995 99998 467776 4557777
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.|..+ +||+|||+|++++||++++.||.||+||++|++|+|.|||++|. +||+|.+++|++.++...| +.++
T Consensus 404 ~~~~d------~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~ 475 (536)
T PRK10946 404 AFDAN------GFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLL-RHPAVIHAALVSMEDELMG-EKSC 475 (536)
T ss_pred hcccC------CceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHH-hCCCcceEEEEcCCCcccC-ceEE
Confidence 77643 39999999999999999999999999999999999999999995 9999999999999988777 8999
Q ss_pred EEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~ 692 (693)
++|+++++ .+.+++++++++. |++|+.|..++.
T Consensus 476 a~vv~~~~--~~~~~l~~~~~~~~l~~~~~P~~~~~ 509 (536)
T PRK10946 476 AFLVVKEP--LKAVQLRRFLREQGIAEFKLPDRVEC 509 (536)
T ss_pred EEEEeCCC--CCHHHHHHHHHhCCccccccCcEEEE
Confidence 99998764 6778999999986 999999988764
No 74
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.4e-59 Score=520.84 Aligned_cols=454 Identities=19% Similarity=0.200 Sum_probs=372.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
|+.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++|++|+++++|+.++++++|||+++|++++|++
T Consensus 10 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 10 AETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 467899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+.++.+++..+++.+++++++++........ ....+.+. ...........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~------------~~~~~~~~---------------~~~~~~~~~~~--- 131 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDAV------------GTQIITLS---------------ALEQAETSGGP--- 131 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEeccccccccc------------CCceEEch---------------HhhhhhhhcCC---
Confidence 9999999999999999999999875321100 00111110 00111111100
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCE
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (693)
........++++++|+|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++.++.++..|++
T Consensus 132 --~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~ 209 (502)
T TIGR01734 132 --VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGT 209 (502)
T ss_pred --ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCE
Confidence 001122356899999999999999999999999999888888888889999999999999999999999999999999
Q ss_pred EEEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceec
Q 005501 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (693)
Q Consensus 425 lvi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (693)
+++.+.. .++..+++.++++++|.+.++|+++..++.........+++++.++++|++++.+..+++.+.++++.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 289 (502)
T TIGR01734 210 LHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN 289 (502)
T ss_pred EEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe
Confidence 9998753 36788999999999999999999998877654344556789999999999999999999998888899999
Q ss_pred ccccccccceeccCCc----CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccc
Q 005501 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (693)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~ 573 (693)
.||+||++++++.... .......++|+|++|++++|+|++++++|.|+ +|||++ .+||++ +++
T Consensus 290 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~--~Gel~v~g~~~~~gy~~------~~~ 361 (502)
T TIGR01734 290 TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGE--KGEIVIVGPSVSKGYLN------NPE 361 (502)
T ss_pred CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCC--eeEEEEccccccccccC------Ccc
Confidence 9999999865443221 12223457999999999999999999999998 499998 467776 444
Q ss_pred cccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeec-CCCCC
Q 005501 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS-PAGGG 652 (693)
Q Consensus 574 ~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~-~~~~g 652 (693)
.+...|... .|.+||+|||+|+++++ ++++.||.||+||++|++|+|.|||++|. ++|+|++|+|+++. +...+
T Consensus 362 ~~~~~~~~~---~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~ 436 (502)
T TIGR01734 362 KTAEAFFSH---EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLR-QSSYIESAVVVPKYNKDHKV 436 (502)
T ss_pred cchHhheeC---CCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHH-cCCCccEEEEEEEEcCCCCc
Confidence 555555432 36679999999999976 99999999999999999999999999995 99999999999976 33344
Q ss_pred ceEEEEEEEecCCCCCC---h-HHHHHHHHHHHHhhcCCCceecC
Q 005501 653 PEVLVIFVVLKKGFTSQ---P-DKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~---~-~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
+.++++|++.+....+ . .+++++++++||.++.|.+++++
T Consensus 437 -~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v 480 (502)
T TIGR01734 437 -EYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYR 480 (502)
T ss_pred -eEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEc
Confidence 8899999987643221 1 67899999999999999988753
No 75
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-59 Score=525.85 Aligned_cols=474 Identities=21% Similarity=0.195 Sum_probs=383.8
Q ss_pred ccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHH
Q 005501 172 VLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIY 250 (693)
Q Consensus 172 ~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~ 250 (693)
+.|..+.+.. .++.+|+++|+++.+. .+||.||.++++++|++|.+. +++|++|+|+++|++++++++
T Consensus 16 ~~n~~~~~~~---~a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 16 RQNWVNQLAR---HALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccCHHHHHHH---HHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 3455544332 2367899999998877 999999999999999999999 999999999999999999999
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCC
Q 005501 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQ 328 (693)
Q Consensus 251 LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 328 (693)
+||+++|++++|+++.++.+++..+++++++++++++.... ..........+. ..+++... ...+
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 151 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVAGGS-------SDDS 151 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCccceEEEecCC-------Cccc
Confidence 99999999999999999999999999999999999987432 111111111111 12222110 0112
Q ss_pred cccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCC-CCCCEEEEeCCcc
Q 005501 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL-KVGDVYCWPTNLG 407 (693)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~ 407 (693)
..+++++...... .........+++++++|||||||.||||+++|+++.+.+......+++ ..++++++..|+.
T Consensus 152 ~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (542)
T PRK07786 152 VLGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLF 226 (542)
T ss_pred ccCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchH
Confidence 3456666543322 111223456789999999999999999999999998887777666776 6778999999999
Q ss_pred ccchhHHHHHHHHcCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcc
Q 005501 408 WVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (693)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~ 486 (693)
|.+++..++.++..|+++++.+. ..++..+++.|+++++|.++++|+++..|.......... .++|.+++||++++++
T Consensus 227 ~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~ 305 (542)
T PRK07786 227 HIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDT 305 (542)
T ss_pred HHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHH
Confidence 99999889999999999999753 457889999999999999999999999998765433332 3699999999999999
Q ss_pred hHHHHHhhCCCCceecccccccccceeccCCcC-CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ec
Q 005501 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FP 560 (693)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~ 560 (693)
+.+++.+.+++.++++.||+||++...+..... ......++|+|++++.++|+|+++++++.|+ +|||++ ..
T Consensus 306 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~--~Gel~v~g~~~~~ 383 (542)
T PRK07786 306 LLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGE--VGEIVYRAPTLMS 383 (542)
T ss_pred HHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCC--ceEEEEEChhhhh
Confidence 999999988889999999999998644332221 1234578999999999999999999999998 499998 45
Q ss_pred ccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccce
Q 005501 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE 640 (693)
Q Consensus 561 gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~ 640 (693)
||++ +++.+...|. . .||+|||++++++||+++++||.||+||++|.+|++.|||++|. +||+|.+
T Consensus 384 gy~~------~~~~~~~~f~-----~--~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~ 449 (542)
T PRK07786 384 GYWN------NPEATAEAFA-----G--GWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLA-SHPDIVE 449 (542)
T ss_pred hhcC------CHHHHHHHhh-----C--CcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCCCccE
Confidence 6766 4445665663 1 39999999999999999999999999999999999999999995 9999999
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCC-CCChHHHHHHHHHHHHhhcCCCceec
Q 005501 641 TAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 641 a~Vv~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++|++.+++..+ +.+++++++.++. ....++++++++++|+.|+.|..++.
T Consensus 450 ~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~ 501 (542)
T PRK07786 450 VAVIGRADEKWG-EVPVAVAAVRNDDAALTLEDLAEFLTDRLARYKHPKALEI 501 (542)
T ss_pred EEEEeccCcccC-ceEEEEEEECCCCCCCCHHHHHHHHHhhccCCCCCCEEEE
Confidence 999999887777 8899999987643 35678999999999999999998765
No 76
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-59 Score=519.46 Aligned_cols=461 Identities=18% Similarity=0.154 Sum_probs=359.6
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+|+++|+++|+++.+.+ +++||+||.++++++|++|.++ +++||+|+++++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 6 HAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 45789999999875321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
++.++++++.+++++++++++++++... .......... ...+.+.. . ......+++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~-~~~~~~~~--~------~~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD------GLAAKVGADL-PLRLSFGG--E------IDGFGSFEAALAGAGP-- 142 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh------hHHHHhhhcc-ceEEEecC--c------ccccccHHHHhcccCC--
Confidence 9999999999999999999999976431 0011110000 00111110 0 0011223332221100
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEe--cchhHHHH----HHHhchhcCCCCCCEEEEeCCccccchhHHHHH
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIRC----TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~--sh~~l~~~----~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (693)
.....+++++|+|||||||.||||++ +|+++... .......++++.+|+++..+|++|+.++...+.
T Consensus 143 -------~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 143 -------RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred -------CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 01122357999999999999999995 55555432 112234567889999999999999988755556
Q ss_pred HHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHhhC
Q 005501 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (693)
Q Consensus 418 ~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~ 495 (693)
.+..|+++++.+ ..++..+++.|+++++|++.++|+++..|..... ....+++++|.+++||+++++++.+.+.+.+
T Consensus 216 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 678899998876 4678899999999999999999999999886532 1334578999999999999999988887765
Q ss_pred CCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccc
Q 005501 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (693)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~ 570 (693)
+..+++.||+||++.++...........+++|+|+++ .++|+|+++++++.|++ |||++ ..||++
T Consensus 295 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------ 364 (501)
T PRK13390 295 -GPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRI--GTVYFERDRLPFRYLN------ 364 (501)
T ss_pred -CCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCCccccccC------
Confidence 5789999999999865433322222345789999999 79999999999999995 99998 345665
Q ss_pred ccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCC
Q 005501 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (693)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~ 650 (693)
+++.|++.|... +..||+|||+|++++||+++|.||.|++||++|+||+|.|||++|. .||+|.+++|++++++.
T Consensus 365 ~~~~t~~~~~~~----~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~ 439 (501)
T PRK13390 365 DPEKTAAAQHPA----HPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALT-MHPAVHDVAVIGVPDPE 439 (501)
T ss_pred ChhhhHHhhccC----CCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHH-hCCCeeEEEEEeccCcc
Confidence 455666665421 2249999999999999999999999999999999999999999995 99999999999999887
Q ss_pred CCceEEEEEEEecCCCCCC---hHHHHHHHHHHHHhhcCCCceec
Q 005501 651 GGPEVLVIFVVLKKGFTSQ---PDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~---~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+ +.+++++++.++...+ .++++++++++|+.||.|..++.
T Consensus 440 ~~-e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~ 483 (501)
T PRK13390 440 MG-EQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEF 483 (501)
T ss_pred cC-ceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEE
Confidence 77 8999999987654333 35899999999999999998875
No 77
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-58 Score=525.63 Aligned_cols=479 Identities=16% Similarity=0.184 Sum_probs=376.1
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+..+|+++|+++.+. ..+.+||+||.++++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l 94 (576)
T PRK05620 20 STVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPL 94 (576)
T ss_pred HHhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeec
Confidence 368999999987543 23599999999999999999987 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-c-eEEEcCCCCC---CCCCCCCCcccHHHHhcc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-K-AIVLPAIGND---VGIPLREQDLSWKDFLSS 338 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 338 (693)
+|.++.+++.++++.++++++|+++... ..+..+....+. + ++.+...... ..........+|.++...
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 168 (576)
T PRK05620 95 NKQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDG 168 (576)
T ss_pred ccccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhc
Confidence 9999999999999999999999987532 112222222221 1 2222211100 000011123457777653
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHh--chhcCCCCCCEEEEeCCccccchhHHHH
Q 005501 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILF 416 (693)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (693)
... ........++++++++|||||||.||||+++|+++....... ...+++..++++++.+|++|+++...++
T Consensus 169 ~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~ 243 (576)
T PRK05620 169 RST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPL 243 (576)
T ss_pred CCC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHH
Confidence 221 112233567899999999999999999999999986544322 2357788999999999999999998888
Q ss_pred HHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCC
Q 005501 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (693)
Q Consensus 417 ~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~ 496 (693)
.++..|+++++.+...++..+++.|+++++|++..+|+++..++........+..+||.+++||+++++.+.+++.+.+
T Consensus 244 ~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~- 322 (576)
T PRK05620 244 AAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY- 322 (576)
T ss_pred HHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-
Confidence 9999999999987667889999999999999999999999988765332333346899999999999999988887765
Q ss_pred CCceecccccccccceeccCCcCC-------CCccCccCCCCCCceEEEECCCCCCCC--CCCCceeeEEE-----eccc
Q 005501 497 YNAIIESCGGTELSSAYIQGSLLQ-------PQAFGAFSTATMTAGLVILDECGVPYP--DDQPCVGEVGL-----FPLY 562 (693)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~-------~~~~~~iG~p~~~~~~~ild~~~~~~p--~G~~giGel~v-----~~gy 562 (693)
++++++.||+||++...+...+.. .....++|++.++++++|+|+ +++++ .|. +|||++ +.||
T Consensus 323 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~gY 399 (576)
T PRK05620 323 GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRN--EGEIQVRGNWVTASY 399 (576)
T ss_pred CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCC--ceEEEEEcCcccccc
Confidence 578999999999986544332211 012347899999999999998 77775 355 599998 4677
Q ss_pred CCCcccccccccc----cccccccccC------CCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 563 LGASDRLLNADHE----EVYFRGMPMY------KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 563 ~~~~~~~~~~~~t----~~~f~~~p~~------~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
++. ++.+ ...|..+++. ..++||+|||+|++++||+++|.||.||+||++|++|++.|||++|.
T Consensus 400 ~~~------~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~ 473 (576)
T PRK05620 400 YHS------PTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIM 473 (576)
T ss_pred cCC------ccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHh
Confidence 763 3344 5556544421 13459999999999999999999999999999999999999999996
Q ss_pred ccCcccceeEEEeecCCCCCceEEEEEEEecCCCC---CChHHHHHHHHHHHHhhcCCCceec
Q 005501 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFT---SQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 633 ~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~---~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+||+|.+|+|++.+++..| +.++++++..++.. .+.++|+++|+++|+.|++|..++.
T Consensus 474 -~~p~v~~~~vv~~~~~~~g-~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~ 534 (576)
T PRK05620 474 -AAPEVVECAVIGYPDDKWG-ERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTF 534 (576)
T ss_pred -cCCCceEEEEEeccCCCcC-ceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEE
Confidence 9999999999999998877 88999999877643 3468999999999999999998875
No 78
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-59 Score=513.28 Aligned_cols=433 Identities=20% Similarity=0.188 Sum_probs=359.3
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+++.++++|+++.++ ++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|
T Consensus 10 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 10 AAAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred hcccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 357799999999877 9999999999999999996 5799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (693)
..+.+++..+++++++++++++.... . ...+...+.. ....|.
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~--~----------~~~~~~~~~~-------------~~~~~~------------ 120 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDD--P----------AGLPHVPVRL-------------HARSWH------------ 120 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCcc--c----------ccccceeeec-------------cccccc------------
Confidence 99999999999999999999976310 0 0000000000 000000
Q ss_pred CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCE
Q 005501 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (693)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (693)
......++++++|+|||||||.||||+++|+++...+......+++..+|++++.+|+.|..++ ..++.++..|++
T Consensus 121 ---~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 197 (471)
T PRK07787 121 ---RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNR 197 (471)
T ss_pred ---cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCE
Confidence 0112356899999999999999999999999999888877778889999999999999999887 568899999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+ ..++..+++.|+ +++|++..+|+++..|.+... ....++++|.+++||+++++.+.+++.+.+ +.+++|.|
T Consensus 198 ~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 273 (471)
T PRK07787 198 FVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERY 273 (471)
T ss_pred EEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHc-CCCeeccc
Confidence 98876 467889999999 999999999999999987532 234578999999999999999998888765 57899999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCC-CCCCceeeEEE-----ecccCCCccccccccccccc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p-~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~ 578 (693)
|+||++...+.. .......+++|+|++|++++|+|+++++++ .|+. +|||++ ..||++ +++.|++.
T Consensus 274 G~tE~~~~~~~~-~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~-~Gei~v~g~~~~~gy~~------~~~~t~~~ 345 (471)
T PRK07787 274 GMTETLITLSTR-ADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGET-VGELQVRGPTLFDGYLN------RPDATAAA 345 (471)
T ss_pred CccccCcceecC-CCCcccCCcccccCCCcEEEEECCCCCCCCCCCCC-ceEEEEECcccchhhcC------Chhhchhc
Confidence 999998643332 223334568999999999999999999997 3431 599998 346665 44567767
Q ss_pred ccccccCCCceeeeecceEEEecCCcEEEEeec-CCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA-DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~-dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
|..+ .||+|||+|++++||+++++||+ |++||++|++|+|.|||++|. .+|.|++++|++.++...+ +.++
T Consensus 346 ~~~~------~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 417 (471)
T PRK07787 346 FTAD------GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALL-GHPGVREAAVVGVPDDDLG-QRIV 417 (471)
T ss_pred ccCC------CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHH-hCCCcceEEEEcccccccC-eEEE
Confidence 7543 29999999999999999999996 899999999999999999995 9999999999999887766 8999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+||+... ..+.++++++++++|++|+.|..++.
T Consensus 418 a~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~ 450 (471)
T PRK07787 418 AYVVGAD--DVAADELIDFVAQQLSVHKRPREVRF 450 (471)
T ss_pred EEEEeCC--CCCHHHHHHHHHhhcccccCCcEEEE
Confidence 9999843 45778999999999999999987764
No 79
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.9e-58 Score=520.87 Aligned_cols=469 Identities=22% Similarity=0.245 Sum_probs=375.3
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++||++|+++.++ +++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 ~~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~ 105 (547)
T PRK06087 33 ARAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLL 105 (547)
T ss_pred HHHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccc
Confidence 367999999997653 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
|.++.+++.+++++++++++++++..... ...+.+..+....+. .++.+..... ......+.++......
T Consensus 106 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~- 177 (547)
T PRK06087 106 PSWREAELVWVLNKCQAKMFFAPTLFKQT-RPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP- 177 (547)
T ss_pred hhcCHHHHHHHHHhcCCeEEEEecccccc-cHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc-
Confidence 99999999999999999999998643211 111111122222221 2333322111 0122345555443221
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHc
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (693)
........++++++|+|||||||.||||+++|+++..........++++++|++++..|+.|.+++ ..++.+++.
T Consensus 178 ----~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 178 ----LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred ----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 011223467899999999999999999999999998877777777889999999999999999987 467888999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+ ..++..+++.|+++++|++..+|+++..++........+++++|.+++||+++++++.+.+... +++++
T Consensus 254 g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~ 330 (547)
T PRK06087 254 GARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLL 330 (547)
T ss_pred CCEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEE
Confidence 99999986 4678899999999999999988877777776544445567899999999999999988877654 68999
Q ss_pred cccccccccceeccCCcCC-CCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccc
Q 005501 502 ESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t 575 (693)
+.||+||++.......... .....++|+|++++.++|+|++++++|.|+. ||+++ +.||++ +++.+
T Consensus 331 ~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~~------~~~~~ 402 (547)
T PRK06087 331 SVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCE--GEEASRGPNVFMGYLD------EPELT 402 (547)
T ss_pred EEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCc--ceEEEecccccccccC------CHHHH
Confidence 9999999986544322211 1234578999999999999999999999985 99988 456776 44455
Q ss_pred cccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceE
Q 005501 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (693)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~ 655 (693)
...|.. +.||+|||++++++||+++++||.||+||++|++|+|.+||++|. .+|+|.+++|++.+++..| ++
T Consensus 403 ~~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~ 474 (547)
T PRK06087 403 ARALDE------EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILL-QHPKIHDACVVAMPDERLG-ER 474 (547)
T ss_pred HHHhCC------CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHH-hCCCeeEEEEEecCCCCcC-ce
Confidence 555543 239999999999999999999999999999999999999999996 8999999999999888777 89
Q ss_pred EEEEEEecC-CCCCChHHHHHHHH-HHHHhhcCCCceec
Q 005501 656 LVIFVVLKK-GFTSQPDKLKMIFS-KAIQSKLNPLFKVW 692 (693)
Q Consensus 656 l~a~vv~~~-~~~~~~~~l~~~l~-~~L~~~m~P~~~v~ 692 (693)
++++|++.+ +...+.+++.+++. ++|+.+++|..+..
T Consensus 475 ~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~ 513 (547)
T PRK06087 475 SCAYVVLKAPHHSLTLEEVVAFFSRKRVAKYKYPEHIVV 513 (547)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHhccccccCCCeEEEE
Confidence 999999876 44566788998885 57999999988765
No 80
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-58 Score=517.09 Aligned_cols=471 Identities=20% Similarity=0.178 Sum_probs=371.7
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++++|+++|+.+.++ .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 12 ~a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l 83 (533)
T PRK07798 12 VADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNV 83 (533)
T ss_pred HHHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEec
Confidence 3478999999999766 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
++.++.+++.++++++++++++++.... .....+....+. .++.+..... .....+..+++++......
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 154 (533)
T PRK07798 84 NYRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDALAAGSP 154 (533)
T ss_pred CcCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCCccEEEEecCCcc---cccCCccccHHHHHhccCC
Confidence 9999999999999999999999987432 112222222221 1222322111 1111134567776654322
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh---------cCC------CCCCEEEEeCCc
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---------IDL------KVGDVYCWPTNL 406 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~---------~~~------~~~d~~l~~~~~ 406 (693)
...... ..++.++|+|||||||.||||+++|+++.......... ..+ ..+++++..+|+
T Consensus 155 -----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 228 (533)
T PRK07798 155 -----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPL 228 (533)
T ss_pred -----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecch
Confidence 011111 23455799999999999999999999987654432211 111 567899999999
Q ss_pred cccchhHHHHHHHHcCCEEEEecC-CCChhhHHHHHHHcCCcEEeechHHHHH-HHhcCc-CCCCCCccccEEEeecCCC
Q 005501 407 GWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKA-WRNTNC-LEGLDWTKIRSFASTGETS 483 (693)
Q Consensus 407 ~~~~~~~~~~~~L~~G~~lvi~~~-~~~~~~~~~~i~~~~vt~l~~~P~~l~~-l~~~~~-~~~~~l~~lr~v~~gGe~l 483 (693)
.|+.+++.++.+|+.|+++++.+. ..++..+++.++++++|.+.++|+.+.. +..... ....+++++|.+++||+++
T Consensus 229 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~ 308 (533)
T PRK07798 229 MHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALF 308 (533)
T ss_pred hhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCC
Confidence 999999999999999999999873 4578899999999999999999866533 333221 2345678999999999999
Q ss_pred CcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccC--CCCCCceEEEECCCCCCCCCCCCceeeEEEe--
Q 005501 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--TATMTAGLVILDECGVPYPDDQPCVGEVGLF-- 559 (693)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~~~~~~ild~~~~~~p~G~~giGel~v~-- 559 (693)
++.+.+++.+.+++..+++.||+||++.+........ ..+.| ++.++..++|+|+++++++.|..+.|+++.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~ 385 (533)
T PRK07798 309 SPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG---AVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGH 385 (533)
T ss_pred CHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC---CccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEEeecC
Confidence 9999999988887889999999999976443332211 12334 7889999999999999999998655777663
Q ss_pred --cccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcc
Q 005501 560 --PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADES 637 (693)
Q Consensus 560 --~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~ 637 (693)
.||++ +++.|+..|.. ..|.+||+|||++++++||++++.||.|++||++|++|+|.|||++|. ++|+
T Consensus 386 ~~~gy~~------~~~~t~~~f~~---~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~ 455 (533)
T PRK07798 386 IPLGYYK------DPEKTAETFPT---IDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALK-AHPD 455 (533)
T ss_pred ccccccC------ChhhhHHhhcc---CCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHH-hCcc
Confidence 35555 45567777754 246679999999999999999999999999999999999999999995 9999
Q ss_pred cceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 638 ILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 638 V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|.+++|++.++...+ +.++++++++++...+.++++++++++|+.|++|..++.
T Consensus 456 v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~ 509 (533)
T PRK07798 456 VADALVVGVPDERWG-QEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWF 509 (533)
T ss_pred ceeEEEEeccCcccC-ceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEE
Confidence 999999999887767 889999999887667889999999999999999988764
No 81
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-58 Score=520.39 Aligned_cols=471 Identities=22% Similarity=0.241 Sum_probs=370.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 33 FRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred HHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccC
Confidence 468999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc-eEEEcCCCCC-----------------CCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGND-----------------VGIPLR 326 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------------~~~~~~ 326 (693)
|.++.+++.+++++++++++|+++.+. .....+....... +++....... ......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFA------TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhH------HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999987532 1111111111111 1111100000 000011
Q ss_pred CCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh----cCCC---CCCE
Q 005501 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLK---VGDV 399 (693)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~----~~~~---~~d~ 399 (693)
++...+.+....... .........++++|+|+|||||||.||||+++|++++.++...... +... ....
T Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 179 PGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred CCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 123345544433221 1112234567899999999999999999999999987655332211 1111 2346
Q ss_pred EEEeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEe
Q 005501 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (693)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~ 478 (693)
++...|+.|.++. ...+.++..|++.++.+...++..+++.++++++|.+..+|+++..+.........+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7788899988775 566788889999888775557888999999999999999999999998876555566789999999
Q ss_pred ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE
Q 005501 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (693)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v 558 (693)
||+++++.+.+.+.+.+ ++++++.||+||++..++...........++|+|++|++++|+|++++++|.|+. |||++
T Consensus 335 gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~--Gel~v 411 (557)
T PRK07059 335 GGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEP--GEICI 411 (557)
T ss_pred ccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999888887665 6899999999999876544433323345789999999999999999999999985 99999
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
..||++ +++.+...|..+ .||+|||+|++++||+++++||+||+||++|++|+|.|||++|.
T Consensus 412 ~g~~~~~gY~~------~~~~~~~~~~~~------g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~- 478 (557)
T PRK07059 412 RGPQVMAGYWN------RPDETAKVMTAD------GFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA- 478 (557)
T ss_pred eCCccchhhhc------CHHHHhhhcccC------CceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH-
Confidence 346665 444565555432 39999999999999999999999999999999999999999995
Q ss_pred cCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 634 ~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.||+|.+++|+++++...+ +.++++++..++ ..+.++++++++++|+.++.|..+.+
T Consensus 479 ~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~ 535 (557)
T PRK07059 479 SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKDP-ALTEEDVKAFCKERLTNYKRPKFVEF 535 (557)
T ss_pred hCCceeEEEEEecccCCCC-eeEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEE
Confidence 9999999999999888777 899999997653 45678999999999999999988765
No 82
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-58 Score=516.83 Aligned_cols=448 Identities=19% Similarity=0.202 Sum_probs=354.6
Q ss_pred CCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
.+|+++|+++.+. .+||+||.++++++|..|.+. + ++||+|+++++|++++++++|||+++|++++|+||
T Consensus 13 ~~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 13 AGDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNT 84 (540)
T ss_pred ccCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecc
Confidence 4699999998766 999999999999999999999 9 89999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (693)
.++.+++..++++++++++|+++.... ....+. .....++.+. ...|.++......
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~------~~~~~~-~~~~~~i~~~-------------~~~~~~~~~~~~~---- 140 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRP------LLDGLD-LPGVRVLDVD-------------TPAYAELVAAAGA---- 140 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhH------HHHhhc-ccCceEEEcc-------------chhhhhhhccccC----
Confidence 999999999999999999999875321 111110 0011222221 0123333321111
Q ss_pred CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHH-HHHHHHcCCE
Q 005501 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGAT 424 (693)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~ 424 (693)
..+.....++++++|+|||||||+||||+++|+++.+........++++++|+++..+|+.|..++.. ++.+|..|++
T Consensus 141 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 141 -LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred -cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 01112346799999999999999999999999999888887778889999999999999999998855 4457889999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+ ..++..+++.++++++|++..+|+.+..++...........+++.+ + |+++++.....+.+.+ +++++|.|
T Consensus 220 ~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~Y 295 (540)
T PRK13388 220 VALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGY 295 (540)
T ss_pred EEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceeccc
Confidence 98875 4678899999999999999999999999886543222223456643 3 5566777777777665 58899999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEE-----------EECCCCCCCC-CCCCceeeEEEe------cccCCCc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------ILDECGVPYP-DDQPCVGEVGLF------PLYLGAS 566 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~-----------ild~~~~~~p-~G~~giGel~v~------~gy~~~~ 566 (693)
|+||++.+++... ....+++|+|++|++++ ++|++|++++ .|. +|||++. .||++
T Consensus 296 G~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~~gY~~-- 368 (540)
T PRK13388 296 GSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFFEGYYN-- 368 (540)
T ss_pred ccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCcccccccC--
Confidence 9999987554321 12456899999998764 5566666664 344 5999984 35555
Q ss_pred ccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEee
Q 005501 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (693)
Q Consensus 567 ~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~ 646 (693)
+++.+++.|. .| ||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .||+|.+|+|+++
T Consensus 369 ----~~~~t~~~~~-----~g--~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~g~ 436 (540)
T PRK13388 369 ----NPEATAERMR-----HG--MYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILL-RHPAINRVAVYAV 436 (540)
T ss_pred ----ChHHHHHHhh-----cC--ceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHH-hCCCceEEEEEEc
Confidence 4556666663 13 9999999999999999999999999999999999999999995 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCChHHHHHHHHHH--HHhhcCCCceec
Q 005501 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA--IQSKLNPLFKVW 692 (693)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~--L~~~m~P~~~v~ 692 (693)
+++..| +.+++++++.++...+.++++++++.+ |+.|++|..++.
T Consensus 437 ~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~~~~~P~~~~~ 483 (540)
T PRK13388 437 PDERVG-DQVMAALVLRDGATFDPDAFAAFLAAQPDLGTKAWPRYVRI 483 (540)
T ss_pred cCCCCC-ceeEEEEEECCCCcCCHHHHHHHHHhhccCCcccCCcEEEE
Confidence 988777 788999988877677888999999875 999999998764
No 83
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-58 Score=516.91 Aligned_cols=472 Identities=18% Similarity=0.208 Sum_probs=372.3
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
|+++||+++++.... +..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 95 (542)
T PRK06018 20 ARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVN 95 (542)
T ss_pred HHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccc
Confidence 478999999985322 1235899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
|.++.+++..+++.+++++++++..+. +.+.++....+. .++++........ ....+...|.++......
T Consensus 96 ~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 167 (542)
T PRK06018 96 PRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPSVERYVVLTDAAHMPQ-TTLKNAVAYEEWIAEADG- 167 (542)
T ss_pred cccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCCccEEEEecccccccc-cCccccccHHHHhccCCc-
Confidence 999999999999999999999987532 222222222221 2222221111000 011123356665543321
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHH-H-HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHH
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-R-CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~-~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (693)
........++++++|+|||||||.||||+++|++.+ + ........++++.+|+++...|++|+.+....+.++.
T Consensus 168 ----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~ 243 (542)
T PRK06018 168 ----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPS 243 (542)
T ss_pred ----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhh
Confidence 111223466889999999999999999999999742 2 2233345677889999999999999888876778899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+++++.....++..+++.++++++|++.++|+++..|.+.......++++||.+++|||++++++.+++++ + +.++
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~~~~ 321 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-GVEV 321 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-CCCe
Confidence 9999998765667889999999999999999999999998765444556789999999999999999999887 4 7899
Q ss_pred ecccccccccceeccCCcCCC----------CccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCC
Q 005501 501 IESCGGTELSSAYIQGSLLQP----------QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGA 565 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~----------~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~ 565 (693)
++.||+||++.+.+.+..... ....++|+|.+|++++|+|++++++|.+....||+++. .||++.
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~ 401 (542)
T PRK06018 322 RHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYRV 401 (542)
T ss_pred EeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchhhhcC
Confidence 999999999875543321110 11357899999999999999999998642226999983 344431
Q ss_pred cccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEe
Q 005501 566 SDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAIS 645 (693)
Q Consensus 566 ~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~ 645 (693)
+...+. ..+||+|||++++++||++++.||.||+||++|++|++.|||++|. .||+|.+|+|++
T Consensus 402 ---------~~~~~~------~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~ 465 (542)
T PRK06018 402 ---------DGEILD------DDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV-GHPKVAEAAVIG 465 (542)
T ss_pred ---------cccEec------CCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH-hCCcceeEEEEe
Confidence 111221 2349999999999999999999999999999999999999999995 899999999999
Q ss_pred ecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 646 VSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 646 ~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+++..+ +.++++|++.++...+.++++++++++|+.|+.|..++.
T Consensus 466 ~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 511 (542)
T PRK06018 466 VYHPKWD-ERPLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAF 511 (542)
T ss_pred ccCCCcC-ceeEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEE
Confidence 9988777 899999999887777888999999999999999988764
No 84
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.1e-58 Score=517.26 Aligned_cols=471 Identities=21% Similarity=0.204 Sum_probs=369.9
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. .+||.||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 31 ~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 102 (541)
T TIGR03205 31 AADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLS 102 (541)
T ss_pred HHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 368999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc-CCCceEEEcCCCC-CC-----CCCCCCCcccHHHHhc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-APLKAIVLPAIGN-DV-----GIPLREQDLSWKDFLS 337 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~ 337 (693)
|.++.+++.+++++++++++++++.. ...+...+.... ....++++..... .. .........++.++..
T Consensus 103 ~~~~~~~l~~~i~~~~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 103 PLDGERALSHKLSDSGARLLITSDLA----ALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred CCCCHHHHHHHHhhcCceEEEEeCch----hhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 99999999999999999999998631 011111111111 1122222222110 00 0011122345666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch-----hcCCCCCCEEEEeCCccccchh
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGP 412 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~ 412 (693)
.... ........++++++++|||||||.||||+++|+++.+....... .......+++++..|++|.++.
T Consensus 179 ~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 179 GAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYAL 253 (541)
T ss_pred cCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHH
Confidence 3221 11112345789999999999999999999999998765432211 1122345789999999998876
Q ss_pred -HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHH
Q 005501 413 -VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (693)
Q Consensus 413 -~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~ 491 (693)
..++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 45778899999988775 5678999999999999999999999999987543344567899999999999999998888
Q ss_pred HhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEE--CCCCCCCCCCCCceeeEEE-----ecccCC
Q 005501 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECGVPYPDDQPCVGEVGL-----FPLYLG 564 (693)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~il--d~~~~~~p~G~~giGel~v-----~~gy~~ 564 (693)
.+.+ +.++++.||+||++...+..........+++|+|++++.++|+ |+++++++.|+. |||++ ..||++
T Consensus 333 ~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 333 ERKT-GLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV--GELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHh-CCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCe--eEEEEecCCccccccC
Confidence 7655 5889999999999876554433333445789999999998875 677899999984 99998 345665
Q ss_pred CcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEE
Q 005501 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (693)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv 644 (693)
+++.+++.|.. + ||+|||++++++||+++++||.||+||++|++|+|.|||++|. +||+|.+++|+
T Consensus 410 ------~~~~~~~~~~~-----~--~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~ 475 (541)
T TIGR03205 410 ------RPEESAEAFVG-----D--RFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIY-EHPGVQEVIVI 475 (541)
T ss_pred ------ChhhhHhhhcc-----C--CcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHH-hCCCeeeEEEE
Confidence 44466666642 2 8999999999999999999999999999999999999999996 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCC-CCChHHHHHHHHHHHHhhcCCCceec
Q 005501 645 SVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+++++..+ +.++++++++++. ..+.++++++++++|+.|++|..++.
T Consensus 476 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 523 (541)
T TIGR03205 476 GIPDQYRG-EAAKAFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEF 523 (541)
T ss_pred ecCCcccC-ceEEEEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEE
Confidence 99987776 8899999988764 35778999999999999999988765
No 85
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-58 Score=518.82 Aligned_cols=470 Identities=18% Similarity=0.176 Sum_probs=368.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|++..+. ++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~ 91 (540)
T PRK06164 20 ARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVN 91 (540)
T ss_pred HHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecC
Confidence 478999999996555 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC------CCceEEEcCCCCCCCCCCCCCcccHHHHhcc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (693)
+..+.+++.+++++++++++|+++++.. .+....+.... ...++.+......... .....+.+....
T Consensus 92 ~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 164 (540)
T PRK06164 92 TRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDALPPLRAIAVVDDAADATPA---PAPGARVQLFAL 164 (540)
T ss_pred CCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccccCCcceEEEeccCcccCCC---CCcccccccccc
Confidence 9999999999999999999999876421 11111111100 0122222211000000 000111111111
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHH
Q 005501 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (693)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (693)
.... ...........++++++++|||||||+||||+++|+++.+.+......+++.+++++++++|++|.+++..++.+
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 243 (540)
T PRK06164 165 PDPA-PPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGA 243 (540)
T ss_pred cccC-CcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHH
Confidence 0000 000001122346899999999999999999999999999888888888899999999999999999999889999
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeec-CCCCcchHHHHHhhCCC
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG-ETSNVDDDLWLSSKAWY 497 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG-e~l~~~~~~~~~~~~~~ 497 (693)
+..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.. ....+++++|.+.++| .+...+..+++... +
T Consensus 244 l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~ 319 (540)
T PRK06164 244 LAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--G 319 (540)
T ss_pred HhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--C
Confidence 99999998876 567889999999999999999999999998762 3445688999887766 44445556666544 6
Q ss_pred CceecccccccccceeccCCcCC--CCccCccCCCC-CCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCccc
Q 005501 498 NAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (693)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~ 568 (693)
+++++.||+||++..++...... .......|.|+ +++.++|+| +++++++.|+ +|||++ ..||++
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~~~~~gY~~---- 393 (540)
T PRK06164 320 VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGE--SGEIEIRAPSLMRGYLD---- 393 (540)
T ss_pred CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCC--eeEEEEecccccccccC----
Confidence 88999999999987655443322 12234567876 899999999 5689999998 499999 457776
Q ss_pred ccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecC
Q 005501 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (693)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~ 648 (693)
+++.|+..|..+ +||+|||+|++++||+++|.||.||+||++|++|+|.|||++|. .||+|.+++|++++.
T Consensus 394 --~~~~t~~~~~~~------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~-~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 394 --NPDATARALTDD------GYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALE-ALPGVAAAQVVGATR 464 (540)
T ss_pred --CchhhhhcccCC------CceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHH-hCCCceeEEEEecCC
Confidence 555777777543 39999999999999999999999999999999999999999995 999999999999884
Q ss_pred CCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.++ +.+++++++.++...+.++++++|+++||.|++|..++.
T Consensus 465 -~~~-~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 506 (540)
T PRK06164 465 -DGK-TVPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQV 506 (540)
T ss_pred -CCc-eeEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEE
Confidence 344 789999999887667889999999999999999987764
No 86
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-59 Score=538.57 Aligned_cols=445 Identities=17% Similarity=0.179 Sum_probs=331.4
Q ss_pred cCCCCCCcEEEEEecC-----------CCC--------CCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 005501 185 HRRKEDNTVAIVWRED-----------RCD--------ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~ 244 (693)
+++++||++|+.+... .+. .+..+.+||+||.++++++|++|+++ +++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 4578999999998521 000 12457999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc--CC-CceEEEcCCCCCC
Q 005501 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--AP-LKAIVLPAIGNDV 321 (693)
Q Consensus 245 ~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 321 (693)
+|++++|||+++|++++|+++.++++++.+++++++++++|++.... ..+...... .+ ..++.++......
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~~~~~ii~~~~~~~~~ 231 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGMPNTTIIYLDSLPASV 231 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccCCceEEEEECCCcccc
Confidence 99999999999999999999999999999999999999999986421 111111111 11 1233332211100
Q ss_pred CCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc-----CCCC
Q 005501 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKV 396 (693)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~ 396 (693)
........+|+++......... .........++|++||+|||||||.||||+++|+++++.+.+....+ .+++
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 309 (700)
T PTZ00216 232 -DTEGCRLVAWTDVVAKGHSAGS-HHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE 309 (700)
T ss_pred -ccCCceEEEHHHHHHhCCcccc-ccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC
Confidence 0011234567777654421000 11112334679999999999999999999999999988776654433 2478
Q ss_pred CCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHH-------HHHHcCCcEEeechHHHHHHHhcCcC----
Q 005501 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSLVKAWRNTNCL---- 465 (693)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~-------~i~~~~vt~l~~~P~~l~~l~~~~~~---- 465 (693)
+|++++++|++|.++.......+..|+++++.+ +..+.+ .++++++|++.++|++++.+.+....
T Consensus 310 ~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~ 385 (700)
T PTZ00216 310 DETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPP 385 (700)
T ss_pred CCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhc
Confidence 899999999999888755555677788776532 333433 68899999999999999887642100
Q ss_pred ---------------------CCCC----------------CccccEEEeecCCCCcchHHHHHhhCCCCceeccccccc
Q 005501 466 ---------------------EGLD----------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (693)
Q Consensus 466 ---------------------~~~~----------------l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (693)
...+ .+++|.+++||+++++++.++++..+ + +++|+||+||
T Consensus 386 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TE 463 (700)
T PTZ00216 386 VGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTE 463 (700)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccCccc
Confidence 0000 15799999999999999988776654 4 8999999999
Q ss_pred ccceeccCCcCCCCccCccCCCCCCceEEEECCCCC--CCCCCCCceeeEEE-----ecccCCCcccccccccccccccc
Q 005501 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGV--PYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRG 581 (693)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~--~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~ 581 (693)
+++..+.... .....+++|+|++|++++|+|+++. ..+++. .|||+| +.||++ +++.|++.|..
T Consensus 464 t~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~vrG~~v~~GY~~------~pe~T~~~f~~ 534 (700)
T PTZ00216 464 TVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILLRGPFLFKGYYK------QEELTREVLDE 534 (700)
T ss_pred ccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEEcCCcccchhcC------ChhHhhhhccc
Confidence 9865443332 3345689999999999999997652 234444 489988 567777 56688888865
Q ss_pred cccCCCceeeeecceEEEecCCcEEEEeecCCccc-cCCeeeehHHHHHHHhccCccccee--EEEeecCCCCCceEEEE
Q 005501 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILET--AAISVSPAGGGPEVLVI 658 (693)
Q Consensus 582 ~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~L~~~~p~V~~a--~Vv~~~~~~~g~~~l~a 658 (693)
++ ||+|||+|++++||+|+|+||+||+|| ++|++|+|+|||++|. +||.|.++ +|++.++ . ..++|
T Consensus 535 dG------w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p~V~~~~~~v~~~~~---~-~~l~a 603 (700)
T PTZ00216 535 DG------WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNELVVPNGVCVLVHPA---R-SYICA 603 (700)
T ss_pred cC------CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCcCcccceEEEEEecC---C-ceEEE
Confidence 43 999999999999999999999999999 8999999999999995 99999973 4444322 2 78999
Q ss_pred EEEec
Q 005501 659 FVVLK 663 (693)
Q Consensus 659 ~vv~~ 663 (693)
+|+++
T Consensus 604 ~vv~~ 608 (700)
T PTZ00216 604 LVLTD 608 (700)
T ss_pred EEecC
Confidence 99975
No 87
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-58 Score=515.66 Aligned_cols=444 Identities=17% Similarity=0.155 Sum_probs=358.7
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++.+|+++|+++.+. .+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 44 ~a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl 115 (516)
T PRK13383 44 TAARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPI 115 (516)
T ss_pred HHHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEc
Confidence 3468999999998665 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
++.++.+++..++++++++++++++.+.. .+.. ....+..+... . ... ... .
T Consensus 116 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~~~-----------~---~~~-~~~-~-- 167 (516)
T PRK13383 116 STEFRSDALAAALRAHHISTVVADNEFAE---------RIAG-ADDAVAVIDPA-----------T---AGA-EES-G-- 167 (516)
T ss_pred CccCCHHHHHHHHhcCCCCEEEEchhHHH---------HHHh-hhcceEEeccc-----------h---hhh-hcC-C--
Confidence 99999999999999999999999875321 1111 11122222110 0 000 000 0
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHH--HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHc
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (693)
..+...++.++|+|||||||+||||+++|+.... ........+++.++|+++...|++|.+++..++.++..
T Consensus 168 ------~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~ 241 (516)
T PRK13383 168 ------GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIAL 241 (516)
T ss_pred ------CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhc
Confidence 0111235678999999999999999999974321 11222345678899999999999999999888889999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCCc
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~ 499 (693)
|+++++.. ..+++.+++.++++++|.+.++|+++..|...... ...+++++|.+++||+++++++.+++.+.+ +..
T Consensus 242 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~ 319 (516)
T PRK13383 242 GGTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDI 319 (516)
T ss_pred CCEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cch
Confidence 99998765 56788999999999999999999999999865321 233578999999999999999999988876 478
Q ss_pred eecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCCccccccccc
Q 005501 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADH 574 (693)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~~~~~~~~~~ 574 (693)
+++.||+||++..............+++|+|++|++++|+|+++++++.|+. |||++. .+|.+ ...
T Consensus 320 v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~Y~~-------~~~ 390 (516)
T PRK13383 320 LYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVT--GRIFVGGELAGTRYTD-------GGG 390 (516)
T ss_pred hhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCc--eEEEEecCcccccccC-------Cch
Confidence 9999999999865443332223345789999999999999999999999985 999983 33332 110
Q ss_pred ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 575 t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
..+ .+ .||+|||+|++++||++++.||.||+||++|++|+|.|||.+|. +||+|.+++|+++++...+ +
T Consensus 391 --~~~-----~~--g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~ 459 (516)
T PRK13383 391 --KAV-----VD--GMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALA-AHPAVADNAVIGVPDERFG-H 459 (516)
T ss_pred --hhe-----ec--CceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-c
Confidence 111 12 39999999999999999999999999999999999999999995 9999999999999988777 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.++++|+++++...+.++++++++++|+.++.|..+..
T Consensus 460 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 497 (516)
T PRK13383 460 RLAAFVVLHPGSGVDAAQLRDYLKDRVSRFEQPRDINI 497 (516)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEE
Confidence 99999999876666778999999999999999987764
No 88
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.3e-58 Score=520.48 Aligned_cols=471 Identities=19% Similarity=0.214 Sum_probs=370.7
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+++.++ .+||+||.++++++|+.|. +. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 35 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 35 VAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNV 106 (560)
T ss_pred HHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEecc
Confidence 468999999998766 9999999999999999997 57 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCC-------------------CCCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND-------------------VGIP 324 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 324 (693)
+|.++.+++..++++++++++++++... ..+.......+...++....... ....
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG------TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH------HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 9999999999999999999999987532 11111111112111111100000 0000
Q ss_pred CCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC----CCCC-CE
Q 005501 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID----LKVG-DV 399 (693)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~----~~~~-d~ 399 (693)
.......|.+....... .........++++++++|||||||+||||+++|+++...+.+....++ +.++ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 181 RINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 00122334443332211 111223346789999999999999999999999999887766554443 3344 56
Q ss_pred EEEeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEe
Q 005501 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (693)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~ 478 (693)
++...++.|.+++ ...+.++..|++.++.....++..+++.++++++|++..+|+++..+.+.......++++||.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~ 336 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLG 336 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeee
Confidence 6777888888886 345677888988888765567889999999999999999999999998865545567889999999
Q ss_pred ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE
Q 005501 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (693)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v 558 (693)
||+++++.+.+.+++.+ ++++++.||+||++..++..........+++|+|+++++++|+|+++++++.|+. |||++
T Consensus 337 gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v 413 (560)
T PRK08751 337 GGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEI--GELCI 413 (560)
T ss_pred CCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999988887765 6789999999999875544333223445789999999999999999999999984 99998
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
..||++ +++.++.+|.. ++||+|||+|++++||++++.||.||+||++|++|+|.|||++|.
T Consensus 414 ~~~~~~~gy~~------~~~~~~~~~~~------~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~- 480 (560)
T PRK08751 414 KGPQVMKGYWK------RPEETAKVMDA------DGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA- 480 (560)
T ss_pred ecCccchhhcC------Chhhhhhcccc------CCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH-
Confidence 356666 45566666643 239999999999999999999999999999999999999999995
Q ss_pred cCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 634 ~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.||+|.+|+|+++++...| +.++++++... ...+.++++++++++|+.|+.|..+++
T Consensus 481 ~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P~~v~~ 537 (560)
T PRK08751 481 MMPGVLEVAAVGVPDEKSG-EIVKVVIVKKD-PALTAEDVKAHARANLTGYKQPRIIEF 537 (560)
T ss_pred hCcCeeeeEEEecCCCCCC-ceEEEEEEcCC-CCCCHHHHHHHHHHhhhhccCCeEEEE
Confidence 9999999999999987777 78888887653 356778999999999999999998765
No 89
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5.2e-59 Score=531.11 Aligned_cols=463 Identities=15% Similarity=0.110 Sum_probs=352.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+.++++||+||.++++++|++|.+. +++||+|+++++|+++|++++|||+++|++++|++
T Consensus 49 a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 49 AQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVS 125 (614)
T ss_pred HHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeec
Confidence 468999999987532 12245899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-----HHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhccc
Q 005501 265 DSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (693)
Q Consensus 265 p~~~-----~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (693)
|.++ .+++.+++++++++++|+++.... ...+.... .....++...... ......+|.++....
T Consensus 126 ~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~-~~~~~~i~~~~~~------~~~~~~~~~~~~~~~ 194 (614)
T PRK08180 126 PAYSLVSQDFGKLRHVLELLTPGLVFADDGAAF----ARALAAVV-PADVEVVAVRGAV------PGRAATPFAALLATP 194 (614)
T ss_pred cccccccCCHHHHHHHHhcCCCcEEEEcCHHHH----HHHHhhhc-cCCceEEEecCCC------CCcccccHHHHhccc
Confidence 9998 799999999999999999753100 00000000 0111222221100 001124566665432
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCC--CCCEEEEeCCccccchh-HHHH
Q 005501 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK--VGDVYCWPTNLGWVMGP-VILF 416 (693)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~-~~~~ 416 (693)
.. ...........++++++|+|||||||.||||++||+++.+.+......+++. .++++++++|++|.++. +.++
T Consensus 195 ~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~ 272 (614)
T PRK08180 195 PT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLG 272 (614)
T ss_pred cc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHH
Confidence 11 0001111234578999999999999999999999999988877766666653 56899999999999887 5678
Q ss_pred HHHHcCCEEEEecCCCCh---hhHHHHHHHcCCcEEeechHHHHHHHhcCc----CCCCCCccccEEEeecCCCCcchHH
Q 005501 417 SSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDDDL 489 (693)
Q Consensus 417 ~~L~~G~~lvi~~~~~~~---~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~lr~v~~gGe~l~~~~~~ 489 (693)
.+|+.|+++++.+..+++ ..+++.++++++|+++++|+++..|++... .....+++||.+++||+++++++.+
T Consensus 273 ~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~ 352 (614)
T PRK08180 273 IVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWD 352 (614)
T ss_pred HHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHH
Confidence 899999999997644443 467888999999999999999999876421 1233578999999999999999988
Q ss_pred HHHhh----CC-CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----e
Q 005501 490 WLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----F 559 (693)
Q Consensus 490 ~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~ 559 (693)
++.+. ++ ++++++.||+||++...+.... .....+++|+|++|++++|+|+. . .|||++ +
T Consensus 353 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~~-------~--~GEi~vrg~~v~ 422 (614)
T PRK08180 353 RLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPVG-------G--KLEVRVKGPNVT 422 (614)
T ss_pred HHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecCC-------C--CcEEEEecCccc
Confidence 88764 22 3679999999999865443332 23456799999999999999853 2 389988 4
Q ss_pred cccCCCcccccccccccccccccccCCCceeeeecceEEE----ecCCcEEEEeecCCcccc-CCeeee--hHHHHHHHh
Q 005501 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR----TVGGYIIVQGRADDTMNL-GGIKTS--SVEIERVCD 632 (693)
Q Consensus 560 ~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~----~~dG~l~~~GR~dd~ik~-~G~ri~--~~eIE~~L~ 632 (693)
.||++ +++.|++.|..+ +||+|||+|++ ++||+|+|+||+||+||+ +|++|+ +.|||.++.
T Consensus 423 ~GY~~------~p~~t~~~~~~d------gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~ 490 (614)
T PRK08180 423 PGYWR------APELTAEAFDEE------GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSA 490 (614)
T ss_pred hhhcC------ChhHhHhhcccC------CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhh
Confidence 57776 455777777532 39999999999 468999999999999985 698776 788999985
Q ss_pred ccCcccceeEEEeecCCCCCceEEEEEEEecCCC---------------CCChHHHHHHHHHHHHhhc--------CCCc
Q 005501 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGF---------------TSQPDKLKMIFSKAIQSKL--------NPLF 689 (693)
Q Consensus 633 ~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~---------------~~~~~~l~~~l~~~L~~~m--------~P~~ 689 (693)
.||+|++|+|++.++ +.++|+|+++++. ..+.++|+++++++|..+. .|..
T Consensus 491 -~~p~V~~a~V~g~~~-----~~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~ 564 (614)
T PRK08180 491 -GAPLVQDVVITGHDR-----DEIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVAR 564 (614)
T ss_pred -cCchhheEEEEcCCC-----CceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeE
Confidence 899999999999875 4688999987541 1355789999999999998 6766
Q ss_pred eec
Q 005501 690 KVW 692 (693)
Q Consensus 690 ~v~ 692 (693)
++.
T Consensus 565 ~~~ 567 (614)
T PRK08180 565 ALL 567 (614)
T ss_pred EEE
Confidence 653
No 90
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-58 Score=513.77 Aligned_cols=447 Identities=19% Similarity=0.204 Sum_probs=359.2
Q ss_pred CCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 005501 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (693)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~ 266 (693)
.++++|+++.+. ++||+||.++++++|++|+++ ++++++|+++++|++++++++|||+++|++++|+++.
T Consensus 16 ~~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 87 (529)
T PRK07867 16 EDDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPT 87 (529)
T ss_pred ccCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 378999998766 999999999999999999996 8899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCC
Q 005501 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (693)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (693)
++.+++.+++++++++++|+++.... ....+ .....++.. ....|.+++..... .
T Consensus 88 ~~~~~l~~~l~~~~~~~li~~~~~~~------~~~~~----~~~~~~~~~-----------~~~~~~~~l~~~~~----~ 142 (529)
T PRK07867 88 RRGAALARDIAHADCQLVLTESAHAE------LLDGL----DPGVRVINV-----------DSPAWADELAAHRD----A 142 (529)
T ss_pred CChHHHHHHHHhCCCeEEEECHhHHH------HHHhh----ccCceEEEe-----------ccccHHHHhcccCC----C
Confidence 99999999999999999999975421 11111 111111111 01124444332211 1
Q ss_pred CCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH-HHHHHHHcCCEE
Q 005501 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATL 425 (693)
Q Consensus 347 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~l 425 (693)
........++++++|+|||||||.||||+++|+++..........++++.+|+++..+|++|..+++ .++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 1122234678999999999999999999999999988888887888999999999999999999884 466789999999
Q ss_pred EEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccc
Q 005501 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (693)
Q Consensus 426 vi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (693)
++.+ ..++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.+ ++++++.||
T Consensus 223 ~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG 298 (529)
T PRK07867 223 ALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFG 298 (529)
T ss_pred EecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeec
Confidence 8876 467889999999999999999999999988754332223457884 56888887665 4555555 688999999
Q ss_pred cccccceeccCCcCCCCccCccCCCCCCceEEEEC-CCCCCCCCCC----------CceeeEEE------ecccCCCccc
Q 005501 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQ----------PCVGEVGL------FPLYLGASDR 568 (693)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~----------~giGel~v------~~gy~~~~~~ 568 (693)
+||++...... + ....+++|.|+++ ++|+| +++++++.|+ ..+|||++ ..||++
T Consensus 299 ~TE~~~~~~~~-~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~---- 369 (529)
T PRK07867 299 STEGGVAITRT-P--DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYN---- 369 (529)
T ss_pred ccccccccccC-C--CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccC----
Confidence 99998644322 1 1234678999999 67888 5688888887 00399987 356665
Q ss_pred ccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecC
Q 005501 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (693)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~ 648 (693)
+++.+++.|. .| ||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. .||+|.+|+|+++++
T Consensus 370 --~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~ 439 (529)
T PRK07867 370 --DPEADAERMR-----GG--VYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILL-RYPDATEVAVYAVPD 439 (529)
T ss_pred --ChHhhhhhhc-----CC--eEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHH-hCCCeeEEEEEeccC
Confidence 4445655553 13 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCChHHHHHHHHHH--HHhhcCCCceec
Q 005501 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA--IQSKLNPLFKVW 692 (693)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~--L~~~m~P~~~v~ 692 (693)
+..| +++++++++.++...+.++++++++++ |+.|+.|..++.
T Consensus 440 ~~~g-~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~ 484 (529)
T PRK07867 440 PVVG-DQVMAALVLAPGAKFDPDAFAEFLAAQPDLGPKQWPSYVRV 484 (529)
T ss_pred CCCC-eeEEEEEEECCCCCCCHHHHHHHHHhhccCCcccCCeEEEE
Confidence 8887 899999999887778889999999886 999999998765
No 91
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.7e-59 Score=535.34 Aligned_cols=453 Identities=17% Similarity=0.138 Sum_probs=339.6
Q ss_pred cCCCCCCcEEEEEe-----------cCC----CCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHH
Q 005501 185 HRRKEDNTVAIVWR-----------EDR----CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVI 248 (693)
Q Consensus 185 ~a~~~pd~~Al~~~-----------~~~----~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vv 248 (693)
.++++||++|+.+. ++. ...+.+..+||+||.++++++|++|.++ +++||+|+|+++|+++|++
T Consensus 67 ~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~ 146 (696)
T PLN02387 67 SCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLI 146 (696)
T ss_pred HHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH
Confidence 34789999999542 110 0124566799999999999999999999 9999999999999999999
Q ss_pred HHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCC---
Q 005501 249 IYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGI--- 323 (693)
Q Consensus 249 a~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 323 (693)
++|||+++|+++||+++.++.+++.++|++++++++|++.... ..+..+....+. .++.++........
T Consensus 147 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~ 220 (696)
T PLN02387 147 ALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLETVKRVIYMDDEGVDSDSSLS 220 (696)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCCceEEEEECCCCchhhhhhh
Confidence 9999999999999999999999999999999999999986432 222222222222 23333321110000
Q ss_pred -CCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh-cCCCCCCEEE
Q 005501 324 -PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-IDLKVGDVYC 401 (693)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~-~~~~~~d~~l 401 (693)
.......+|+++....... ........++|+++|+|||||||.||||++||++++..+...... .+++++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l 296 (696)
T PLN02387 221 GSSNWTVSSFSEVEKLGKEN----PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYL 296 (696)
T ss_pred ccCCcEEEEHHHHHHhhccC----CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEE
Confidence 0011124566665543220 111223457999999999999999999999999998877765544 3578999999
Q ss_pred EeCCccccchhHHHHHHHHcCCEEEEecCCC-------ChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCC--------
Q 005501 402 WPTNLGWVMGPVILFSSFLNGATLALYQGSP-------LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE-------- 466 (693)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~-------~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~-------- 466 (693)
+++|++|.++....+..+..|+++....... .+..++..++++++|++.++|++++.+.+.....
T Consensus 297 ~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~ 376 (696)
T PLN02387 297 AYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLA 376 (696)
T ss_pred EECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHH
Confidence 9999999999866556677888776543211 1234567899999999999999999886431000
Q ss_pred -----------------------C--C-------------CC-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccc
Q 005501 467 -----------------------G--L-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (693)
Q Consensus 467 -----------------------~--~-------------~l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (693)
. . .+ +++|.+++||+++++++.+++...+ +++++++||+|
T Consensus 377 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~T 455 (696)
T PLN02387 377 KKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLT 455 (696)
T ss_pred HHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechh
Confidence 0 0 01 5899999999999999987776555 68999999999
Q ss_pred cccceeccCCcCCCCccCccCCCCCCceEEEEC-CCCCCC---CCCCCceeeEEE-----ecccCCCccccccccccccc
Q 005501 508 ELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY---PDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (693)
Q Consensus 508 E~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~~~~---p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~ 578 (693)
|+++..+.... .....+++|+|+|+++++|+| +++... .++. .|||++ +.||++ +++.|++.
T Consensus 456 Et~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~~GY~~------~pe~T~~~ 526 (696)
T PLN02387 456 ETCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVTLGYFK------NQEKTDEV 526 (696)
T ss_pred hcccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCcccchhcC------CHHHHhhh
Confidence 99865544433 234567899999999999998 544322 1222 388887 567777 66688888
Q ss_pred ccccccCCCceeeeecceEEEecCCcEEEEeecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
|..++ +|.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+++|++.+. . ..++
T Consensus 527 f~~d~--~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~-~~p~V~~~~V~g~~~---~-~~~~ 599 (696)
T PLN02387 527 YKVDE--RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS-VSPYVDNIMVHADPF---H-SYCV 599 (696)
T ss_pred hcccc--CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh-cCCCeeEEEEEecCC---c-ceEE
Confidence 85432 35579999999999999999999999999997 599999999999995 999999999998542 2 6799
Q ss_pred EEEEecC
Q 005501 658 IFVVLKK 664 (693)
Q Consensus 658 a~vv~~~ 664 (693)
|+|++++
T Consensus 600 a~vv~~~ 606 (696)
T PLN02387 600 ALVVPSQ 606 (696)
T ss_pred EEEEeCH
Confidence 9999864
No 92
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=8.3e-58 Score=511.07 Aligned_cols=473 Identities=23% Similarity=0.279 Sum_probs=380.7
Q ss_pred cchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 005501 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (693)
Q Consensus 173 ~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~L 251 (693)
+|.+++++.... ++.+||++|+++.+. .+||.||.++++++|++|.+. +++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~-~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNV-VEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHH-hcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 466777777542 467999999998766 999999999999999999999 9999999999999999999999
Q ss_pred HHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCc
Q 005501 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQD 329 (693)
Q Consensus 252 A~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 329 (693)
||+++|++++|+++.++.+++.++++.++++++++++... +.+.......+. ..+..... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 139 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRP--------EAGE 139 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCCccEEEEeCCC--------Cccc
Confidence 9999999999999999999999999999999999987532 111222222221 12222110 0112
Q ss_pred ccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHH-hchhcCCCCCCEEEEeCCccc
Q 005501 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-GWAHIDLKVGDVYCWPTNLGW 408 (693)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~ 408 (693)
..+.++...... ...+....++++++|+|||||||.||||+++|+++...+.. ....++++++|+++...|++|
T Consensus 140 ~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 214 (508)
T TIGR02262 140 VQLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFF 214 (508)
T ss_pred ccHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHH
Confidence 334444332211 11223345789999999999999999999999999876654 345678899999999999999
Q ss_pred cchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcch
Q 005501 409 VMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487 (693)
Q Consensus 409 ~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~ 487 (693)
++++ ..++.++..|+++++.++..++..+++.|+++++|.+.++|+++..++...........++|.+++||+++++++
T Consensus 215 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~ 294 (508)
T TIGR02262 215 AYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEV 294 (508)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHH
Confidence 9988 557788999999999887678889999999999999999999999887654333344678999999999999999
Q ss_pred HHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----eccc
Q 005501 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLY 562 (693)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy 562 (693)
.+.|.+.+ ++++++.||+||++.+...... .....+++|+|++|+.++|+|++++++|.|+. |||++ ..||
T Consensus 295 ~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~--Gel~i~~~~~~~gY 370 (508)
T TIGR02262 295 GQRWQARF-GVDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEP--GELLISGPSSATMY 370 (508)
T ss_pred HHHHHHHh-CCchhhCccccccCceeecCCc-cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCe--eEEEEecCcccccc
Confidence 88888776 5789999999999875544322 22345689999999999999999999999984 99998 3456
Q ss_pred CCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeE
Q 005501 563 LGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETA 642 (693)
Q Consensus 563 ~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~ 642 (693)
++ +++.++..|. .+||+|||++++++||.+++.||.||+||++|.+|+|.|||++|. .+|+|.+++
T Consensus 371 ~~------~~~~~~~~~~-------~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~~ 436 (508)
T TIGR02262 371 WN------NRAKTRDTFQ-------GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALI-QHPAVLEAA 436 (508)
T ss_pred CC------CHHHhHhhhh-------cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHH-hCCCeeEEE
Confidence 55 4445555553 239999999999999999999999999999999999999999995 999999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCC---CChHHHHHHHHHHHHhhcCCCceec
Q 005501 643 AISVSPAGGGPEVLVIFVVLKKGFT---SQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 643 Vv~~~~~~~g~~~l~a~vv~~~~~~---~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+++.++...+ +++++|+++.++.. ...++++++++++|+.++.|..++.
T Consensus 437 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~ 488 (508)
T TIGR02262 437 VVGVEDEDGL-IKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVF 488 (508)
T ss_pred EEeccccCCC-ceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEE
Confidence 9998877666 88999999876542 2357899999999999999987754
No 93
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=8.2e-59 Score=568.65 Aligned_cols=476 Identities=17% Similarity=0.196 Sum_probs=376.9
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
+++++|+++|+++..+ +++||+||.++++++|++|++.+++||+|+++++|++++++++|||+++|++++|++
T Consensus 624 ~a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 696 (1146)
T PRK08633 624 TAKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLN 696 (1146)
T ss_pred HHHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeC
Confidence 3578999999986532 289999999999999999975599999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
|.++.+++.+++++++++++++++............... .....++........ . .....+.+....... +.
T Consensus 697 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-~~ 768 (1146)
T PRK08633 697 YTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL--PENVKVIYLEDLKAK----I-SKVDKLTALLAARLL-PA 768 (1146)
T ss_pred CCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc--ccCceEEEeehhccc----c-chhHHHHHHHHhccC-CH
Confidence 999999999999999999999987533111100000000 001122222211100 0 001112222111100 00
Q ss_pred C--CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhH-HHHHHHHc
Q 005501 345 P--NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (693)
Q Consensus 345 ~--~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (693)
. .........++|+++|+|||||||+||||+++|+++.+.+......++++++|++++.+|+.|..++. .++.+++.
T Consensus 769 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~ 848 (1146)
T PRK08633 769 RLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLE 848 (1146)
T ss_pred HHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHC
Confidence 0 00001234679999999999999999999999999999888887888899999999999999999984 48899999
Q ss_pred CCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCcee
Q 005501 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (693)
Q Consensus 422 G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (693)
|+++++.+...++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++|||++++++.+++.+.+ +++++
T Consensus 849 g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~ 927 (1146)
T PRK08633 849 GIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRIL 927 (1146)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCee
Confidence 99999987667888999999999999999999999999886555556788999999999999999999988776 58999
Q ss_pred cccccccccceeccCCcCC---------CCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEE-----ecccCCCc
Q 005501 502 ESCGGTELSSAYIQGSLLQ---------PQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGAS 566 (693)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~---------~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v-----~~gy~~~~ 566 (693)
|.||+||++...+...+.. ....+++|+|+||++++|+|+ +++++|.|+. |||++ ..||++
T Consensus 928 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~-- 1003 (1146)
T PRK08633 928 EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGED--GLILIGGPQVMKGYLG-- 1003 (1146)
T ss_pred cccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCc--eEEEEcCCCccccccC--
Confidence 9999999986554332211 124578999999999999994 6899999995 99998 467777
Q ss_pred ccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCc--ccceeEEE
Q 005501 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADE--SILETAAI 644 (693)
Q Consensus 567 ~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p--~V~~a~Vv 644 (693)
+++.|++.|... +|.+||+|||+|++|+||++++.||.||+||++|++|+|.|||++|. +|| .+.+++|+
T Consensus 1004 ----~~~~t~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v~ 1075 (1146)
T PRK08633 1004 ----DPEKTAEVIKDI---DGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELA-KALGGEEVVFAVT 1075 (1146)
T ss_pred ----CccchHHHhhcC---CCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHH-hccCCCCceEEEE
Confidence 455777777543 35679999999999999999999999999999999999999999995 998 56789999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCChHHHHHHHHH-HHHhhcCCCceec
Q 005501 645 SVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNPLFKVW 692 (693)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~-~L~~~m~P~~~v~ 692 (693)
+++++..| +.++++++.. ..+.+++++++++ +||+|+.|..++.
T Consensus 1076 ~~~~~~~g-~~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~ 1120 (1146)
T PRK08633 1076 AVPDEKKG-EKLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFK 1120 (1146)
T ss_pred eccCCCCC-cEEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEE
Confidence 99998888 8999999873 3466889999975 6999999988764
No 94
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-58 Score=513.08 Aligned_cols=460 Identities=17% Similarity=0.192 Sum_probs=373.7
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 22 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 93 (524)
T PRK06188 22 LKRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALH 93 (524)
T ss_pred HHHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEecc
Confidence 368999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
|..+.+++..++++++++.+++++... ...........+. ..+.+.... ...++.......
T Consensus 94 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 156 (524)
T PRK06188 94 PLGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP------------DGVDLLAAAAKF 156 (524)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc------------chhhHHHhhhcc
Confidence 999999999999999999999987421 0111111111111 122211110 011111110000
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcC
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (693)
...... ....++++++|+|||||||.||+|+++|+++.+.+......+++..++++++..|++|.+++. ++.+++.|
T Consensus 157 -~~~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G 233 (524)
T PRK06188 157 -GPAPLV-AAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRG 233 (524)
T ss_pred -Cccccc-ccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcC
Confidence 001111 122346699999999999999999999999999888888889999999999999999988764 57889999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceec
Q 005501 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (693)
+++++.+ ..++..+++.++++++|++.++|+++..|++.......+++++|.+++||++++++....+.+.+ +..+++
T Consensus 234 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~ 311 (524)
T PRK06188 234 GTVIVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQ 311 (524)
T ss_pred CEEEEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-Cchhhh
Confidence 9999987 46788999999999999999999999999987655566789999999999999999877776665 467999
Q ss_pred ccccccccceeccCCcC-----CCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccc
Q 005501 503 SCGGTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNA 572 (693)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~ 572 (693)
.||+||++.++...... ......++|+|++|+.++|+|+++++++.|+. |||++ ..||++ ++
T Consensus 312 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~ 383 (524)
T PRK06188 312 YYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEV--GEICVRGPLVMDGYWN------RP 383 (524)
T ss_pred eeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCe--eEEEEECcchhhhhcC------Ch
Confidence 99999997654443221 22345689999999999999999999999985 99999 356665 33
Q ss_pred ccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCC
Q 005501 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (693)
Q Consensus 573 ~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g 652 (693)
..+...|. ..||+|||++++++||++++.||.|++||++|.+|+|.|||++|. .||+|.+++|++.+++..+
T Consensus 384 ~~~~~~~~-------~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~ 455 (524)
T PRK06188 384 EETAEAFR-------DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLA-EHPAVAQVAVIGVPDEKWG 455 (524)
T ss_pred HHhhhhhc-------CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCcC
Confidence 34544442 239999999999999999999999999999999999999999995 9999999999999887777
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+.++++++++++...+.++++++++++++.++.|..++.
T Consensus 456 -~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~ 494 (524)
T PRK06188 456 -EAVTAVVVLRPGAAVDAAELQAHVKERKGSVHAPKQVDF 494 (524)
T ss_pred -ceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEE
Confidence 899999999876666778999999999999999988764
No 95
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-57 Score=516.27 Aligned_cols=469 Identities=22% Similarity=0.274 Sum_probs=365.0
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 a~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~ 105 (563)
T PRK06710 34 ASRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTN 105 (563)
T ss_pred HHHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccC
Confidence 368999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCC------------------CCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG------------------IPLR 326 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 326 (693)
|.++.+++..+++.++++++++++....... .+........+++........ ....
T Consensus 106 p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 106 PLYTERELEYQLHDSGAKVILCLDLVFPRVT------NVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cccCHHHHHHHHhccCCeEEEEeccchhhhh------ccchhhccceeEEeccccccccccccccchhhccccccccccc
Confidence 9999999999999999999999875321111 111110001111100000000 0000
Q ss_pred --CCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch-hcCCCC-CCEEEE
Q 005501 327 --EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKV-GDVYCW 402 (693)
Q Consensus 327 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~-~d~~l~ 402 (693)
.....|..+..... .........++++++++|||||||.||||+++|+++......... .++... ++++++
T Consensus 180 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 180 ESETIHLWNSVEKEVN-----TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred ccchhhhhhhhhhccc-----cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00001222111100 001111223578999999999999999999999998754433222 234444 457888
Q ss_pred eCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecC
Q 005501 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (693)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe 481 (693)
..|+.|.++. ..++.+++.|+++++.+ ..++..+++.|+++++|++.++|+++..++........+++++|.+++||+
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~ 333 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSA 333 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCC
Confidence 9999998887 44667889999999876 467889999999999999999999999998765444556789999999999
Q ss_pred CCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE--
Q 005501 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-- 558 (693)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-- 558 (693)
++++++.+++.+.+ +.+++|.||+||++..............+++|+|.+++.++|+| ++++++|.|+. |||++
T Consensus 334 ~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~--Gel~v~g 410 (563)
T PRK06710 334 PLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEI--GEIVVKG 410 (563)
T ss_pred cCCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCc--eEEEEec
Confidence 99999988887765 67899999999998754333222333456899999999999998 67899999985 99998
Q ss_pred ---ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccC
Q 005501 559 ---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (693)
Q Consensus 559 ---~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~ 635 (693)
..||++ +++.+...|. +.||+|||++++++||+++++||.||+||++|.+|+|.|||++|. +|
T Consensus 411 ~~~~~gY~~------~~~~~~~~~~-------~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~-~~ 476 (563)
T PRK06710 411 PQIMKGYWN------KPEETAAVLQ-------DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLY-EH 476 (563)
T ss_pred CccchhhhC------ChHHHhhhcc-------cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHH-hC
Confidence 345555 4446665553 239999999999999999999999999999999999999999995 99
Q ss_pred cccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 636 p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+|.+++|++++++..| +.++++|+..++...+.++++++++++|+.++.|..+..
T Consensus 477 ~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~ 532 (563)
T PRK06710 477 EKVQEVVTIGVPDPYRG-ETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEF 532 (563)
T ss_pred cceeeEEEEccccCCcC-ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEE
Confidence 99999999999988777 899999999887667788999999999999999987754
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.5e-57 Score=508.56 Aligned_cols=452 Identities=18% Similarity=0.200 Sum_probs=372.0
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+.+|+++|+++.+. .+||+||.++++++|.+|.+. +++|++|+++++|+.++++++|||+++|++++|+++
T Consensus 13 ~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~ 84 (503)
T PRK04813 13 QTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDV 84 (503)
T ss_pred HhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCC
Confidence 67899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (693)
.++.+++..+++.++++++++++...... ... ....++++...... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----------------~~~~~~~~~~~~~~--~~ 132 (503)
T PRK04813 85 SSPAERIEMIIEVAKPSLIIATEELPLEI--------------LGI----------------PVITLDELKDIFAT--GN 132 (503)
T ss_pred CChHHHHHHHHHhcCCCEEEecccccccc--------------cCC----------------cEEehHHhhhhhhc--cc
Confidence 99999999999999999999987531000 000 01112222111000 00
Q ss_pred CCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEE
Q 005501 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (693)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (693)
.........++++++++|||||||.||||.++|+++...+.+....+++..+++++...|++|+.+++.++.+|..|+++
T Consensus 133 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~ 212 (503)
T PRK04813 133 PYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTL 212 (503)
T ss_pred cccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEE
Confidence 00112234678899999999999999999999999998888887888899999999999999999998888999999999
Q ss_pred EEecCC--CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 426 ALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 426 vi~~~~--~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
++.+.. .++..+++.++++++|++..+|+++..+.........+++++|.++++|+++++.+.+++.+.++++.+++.
T Consensus 213 v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~ 292 (503)
T PRK04813 213 VALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNT 292 (503)
T ss_pred EEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeC
Confidence 998753 367889999999999999999999988765544445567899999999999999999999998888899999
Q ss_pred cccccccceeccCCc----CCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCccccccccc
Q 005501 504 CGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (693)
Q Consensus 504 YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~ 574 (693)
||+||++..++.... .......++|+|.++++++|+|+++.+++.|+. ||+++ ..||++ +++.
T Consensus 293 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~ 364 (503)
T PRK04813 293 YGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQ--GEIVISGPSVSKGYLN------NPEK 364 (503)
T ss_pred cccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCc--eEEEEeccccccccCC------ChhH
Confidence 999999764433221 112334579999999999999999999999984 99998 457776 4446
Q ss_pred ccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCce
Q 005501 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (693)
Q Consensus 575 t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~ 654 (693)
+.+.|..+ .|.+||+|||+|++ +||++++.||.||+||++|++|+|.|||++|. .+|+|.+++|++.++...+ +
T Consensus 365 ~~~~~~~~---~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~ 438 (503)
T PRK04813 365 TAEAFFTF---DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLR-QSSYVESAVVVPYNKDHKV-Q 438 (503)
T ss_pred hHHhhccC---CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHH-hCCCcceEEEEEeeCCCCc-c
Confidence 66555432 35679999999999 99999999999999999999999999999995 9999999999998776555 8
Q ss_pred EEEEEEEecCCCC-CC---hHHHHHHHHHHHHhhcCCCceec
Q 005501 655 VLVIFVVLKKGFT-SQ---PDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 655 ~l~a~vv~~~~~~-~~---~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.++++++++++.. .. ..+++++++++|+.++.|..++.
T Consensus 439 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 480 (503)
T PRK04813 439 YLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIY 480 (503)
T ss_pred EEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEE
Confidence 9999999876421 11 14589999999999999988764
No 97
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-57 Score=511.00 Aligned_cols=485 Identities=20% Similarity=0.215 Sum_probs=372.0
Q ss_pred cCCCCccchhhhhccCcccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH
Q 005501 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245 (693)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~ 245 (693)
|++....+..+.+ .. +++.+|+++|+.+.+. .+||.||+++++++|++|.+. +++|++|+++++|+++
T Consensus 27 ~~~~~~~~l~~~l-~~--~a~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 27 EYPHGERPLTEYL-RA--WARERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred CCCcCcccHHHHH-HH--HHHHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH
Confidence 4444444443332 22 2367899999998776 999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEE-EcCCCC---CC
Q 005501 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIV-LPAIGN---DV 321 (693)
Q Consensus 246 ~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 321 (693)
+++++|||+++|++++|++|.++.+++.+++++++++++++++... +.+.++........+. ....+. ..
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCcceEEEecccccccccc
Confidence 9999999999999999999999999999999999999999987532 1122222111112222 111100 00
Q ss_pred CCCCCC-------CcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch-hcC
Q 005501 322 GIPLRE-------QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HID 393 (693)
Q Consensus 322 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~ 393 (693)
...... ....+.++...... ...........++++|+|+|||||||.||||+++|+++......... ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~ 247 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVV 247 (567)
T ss_pred ccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhcc
Confidence 000000 00112222221111 01111223346799999999999999999999999998766544332 356
Q ss_pred CCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCcc
Q 005501 394 LKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (693)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~ 472 (693)
+..+|+++.++|++|.++. ..++.++.+|+++++.+ ..++..++..++++++|.+.++|..+..+.........++++
T Consensus 248 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 248 GGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 7889999999999999887 56888999999999987 568899999999999999999999999988765444556778
Q ss_pred ccEEEe--ecCCCCcchHHHHHhhCCCCceecccccccccceeccCCc--CC----CCccCccCCCCCCceEEEEC-CCC
Q 005501 473 IRSFAS--TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQ----PQAFGAFSTATMTAGLVILD-ECG 543 (693)
Q Consensus 473 lr~v~~--gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~----~~~~~~iG~p~~~~~~~ild-~~~ 543 (693)
++.+.. +|+.++++..+.+.+.++...+.+.||+||++...+.... .. ....+++|+|++|++++|+| +++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~ 406 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETG 406 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCC
Confidence 887654 4589999998888877654444568999998764333221 11 12346799999999999999 679
Q ss_pred CCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccC
Q 005501 544 VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (693)
Q Consensus 544 ~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (693)
++++.|+. |||++ ..||++ +++.++..|. +| ||+|||+|++++||+++|+||+||+||++
T Consensus 407 ~~~~~g~~--Gel~v~g~~v~~gY~~------~~~~~~~~~~-----dg--~~~TGDl~~~~~~g~l~i~GR~~d~i~~~ 471 (567)
T PRK06178 407 ELLPLGAE--GEIVVRTPSLLKGYWN------KPEATAEALR-----DG--WLHTGDIGKIDEQGFLHYLGRRKEMLKVN 471 (567)
T ss_pred CcCCCCCc--eEEEEECCcccccccC------Chhhhhhccc-----CC--ceeecceEEEecCCeEEEEecccccEEEC
Confidence 99999984 99998 356666 4445655553 23 99999999999999999999999999999
Q ss_pred CeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCC
Q 005501 619 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL 688 (693)
Q Consensus 619 G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~ 688 (693)
|++|+|.|||++|. .+|+|.+++|++.+++..+ +.++++|+++++...+.++++++++++|+.|++|.
T Consensus 472 G~~i~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~ 539 (567)
T PRK06178 472 GMSVFPSEVEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKPGADLTAAALQAWCRENMAVYKVPE 539 (567)
T ss_pred CEEECHHHHHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCce
Confidence 99999999999995 9999999999999887777 88999999987766788999999999999999996
No 98
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.4e-57 Score=497.17 Aligned_cols=398 Identities=14% Similarity=0.090 Sum_probs=324.9
Q ss_pred eecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEe
Q 005501 209 LMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v-~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~ 286 (693)
-+.|+||.++++++|++|++. + ++|++|+++++|+++++++++||+++|++++|+||.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 478999999999999999999 6 67999999999999999999999999999999999999999999999999999998
Q ss_pred ecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccC
Q 005501 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366 (693)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSG 366 (693)
++..... . . .. ... ......++++++++||||
T Consensus 99 ~~~~~~~---------~----------~-------------~~---------~~~-------~~~~~~~~~~~~i~~TSG 130 (452)
T PRK07445 99 LDQLKLS---------H----------P-------------PP---------LPS-------QGILPNLETGWIMIPTGG 130 (452)
T ss_pred cCccccc---------c----------C-------------CC---------CCc-------cccCCCCCCcEEEEeCCC
Confidence 7642100 0 0 00 000 001124689999999999
Q ss_pred CCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCC
Q 005501 367 TTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446 (693)
Q Consensus 367 STG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~v 446 (693)
|||.||||+++|+++.+.+.+....+++.+ +++++.+|++|.+++..++.+|+.|+++++.+.. ..........++++
T Consensus 131 TTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~ 208 (452)
T PRK07445 131 SSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCc
Confidence 999999999999999888777766677655 4678889999999998888999999999998632 12222334457899
Q ss_pred cEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCC-CCccC
Q 005501 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFG 525 (693)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~ 525 (693)
|++.++|++++.+++.. ...+++||.+++||+++++++.+.+... +++++|.||+||++..++...+.. .....
T Consensus 209 t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~ 283 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNN 283 (452)
T ss_pred eEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCC
Confidence 99999999999998632 2347899999999999999988777542 678999999999986444332221 12346
Q ss_pred ccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCCcccccccccccccccccccCCCceeeeecceEEEe
Q 005501 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 600 (693)
Q Consensus 526 ~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~ 600 (693)
++|+|+++++++|+ .|+ .|||++. .||++. + ....+||+|||+|++|
T Consensus 284 ~~G~~~p~~~v~i~--------~g~--~Gel~v~g~~~~~gY~~~-----------------~-~~~~g~~~TGDl~~~d 335 (452)
T PRK07445 284 SSGQVLPHAQITIP--------ANQ--TGNITIQAQSLALGYYPQ-----------------I-LDSQGIFETDDLGYLD 335 (452)
T ss_pred cCCccCCCCeEEEc--------CCC--cceEEEeCCccchhhcCC-----------------c-cCCCCEEECCCEEEEc
Confidence 79999999999998 344 4999982 344331 1 1123499999999999
Q ss_pred cCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHH
Q 005501 601 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA 680 (693)
Q Consensus 601 ~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~ 680 (693)
+||+++|.||.||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.++|+++.+++ ..+.++++++++++
T Consensus 336 ~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~~-~~~~~~l~~~~~~~ 412 (452)
T PRK07445 336 AQGYLHILGRNSQKIITGGENVYPAEVEAAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKDP-SISLEELKTAIKDQ 412 (452)
T ss_pred CCCCEEEEeecCCEEEECCEEECHHHHHHHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCCC-CCCHHHHHHHHHHh
Confidence 99999999999999999999999999999995 9999999999999998877 899999998765 45678999999999
Q ss_pred HHhhcCCCceec
Q 005501 681 IQSKLNPLFKVW 692 (693)
Q Consensus 681 L~~~m~P~~~v~ 692 (693)
|+.|++|..++.
T Consensus 413 L~~~~~P~~i~~ 424 (452)
T PRK07445 413 LSPFKQPKHWIP 424 (452)
T ss_pred CCcccCCeEEEE
Confidence 999999998775
No 99
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-56 Score=507.04 Aligned_cols=470 Identities=20% Similarity=0.230 Sum_probs=365.5
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+++.+. ++||+||.++++++|.+|++ . +++|++|+++++|++++++++|||+++|++++|+
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 104 (560)
T PRK08974 33 VARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNV 104 (560)
T ss_pred HHhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEecc
Confidence 368999999998665 99999999999999999985 7 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCC-------------------C
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI-------------------P 324 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 324 (693)
+|.++.+++.+++++++++++++++... ..+..+........+........... .
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (560)
T PRK08974 105 NPLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKY 178 (560)
T ss_pred CccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccc
Confidence 9999999999999999999999986432 11222221111111111100000000 0
Q ss_pred CCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc---CCCCCCEEE
Q 005501 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYC 401 (693)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l 401 (693)
..+...++.+....... .........++++++|+|||||||.||||+++|+++...+......+ ....++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (560)
T PRK08974 179 HLPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVV 254 (560)
T ss_pred cCCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEE
Confidence 00011122222221111 01111224678999999999999999999999999987655433222 233456778
Q ss_pred EeCCccccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeec
Q 005501 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (693)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG 480 (693)
..+|+.|.++. ...+.++.+|+++++.....++..+++.++++++|.+..+|++++.|.........+++++|.+++||
T Consensus 255 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg 334 (560)
T PRK08974 255 TALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGG 334 (560)
T ss_pred EeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecC
Confidence 88888888775 55667888999988876555778899999999999999999999999876544455678999999999
Q ss_pred CCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE--
Q 005501 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (693)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-- 558 (693)
+++++.+.++|.+.+ ++++++.||+||++..++.+........+++|.|++++.++|+|++++++|.|+. |||++
T Consensus 335 ~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g 411 (560)
T PRK08974 335 MAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEP--GELWVKG 411 (560)
T ss_pred ccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCCc--eEEEEec
Confidence 999999988887754 6899999999999876555444333446789999999999999999999999994 99998
Q ss_pred ---ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccC
Q 005501 559 ---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (693)
Q Consensus 559 ---~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~ 635 (693)
..||++ +++.++..|. + .||+|||+++++++|+++++||.||+||++|++|+|.|||++|. .|
T Consensus 412 ~~~~~gy~~------~~~~~~~~~~-----~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~-~~ 477 (560)
T PRK08974 412 PQVMLGYWQ------RPEATDEVIK-----D--GWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVM-LH 477 (560)
T ss_pred CCcchhhcC------Chhhhhhhhh-----c--CCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hC
Confidence 345665 4445665552 1 39999999999999999999999999999999999999999995 99
Q ss_pred cccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 636 p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+|.+++|++.++...+ +.++++++..+. ..+.++++++++++|+.|+.|..+..
T Consensus 478 ~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~-~~~~~~l~~~l~~~l~~~~~P~~~~~ 532 (560)
T PRK08974 478 PKVLEVAAVGVPSEVSG-EAVKIFVVKKDP-SLTEEELITHCRRHLTGYKVPKLVEF 532 (560)
T ss_pred CCeeEEEEEeeecCCcc-eEEEEEEECCCC-CCCHHHHHHHHHhhcccccCCcEEEE
Confidence 99999999999988777 788888876543 45668999999999999999987653
No 100
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=8.5e-58 Score=496.67 Aligned_cols=428 Identities=21% Similarity=0.211 Sum_probs=334.1
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
+++.+|+.+|+.+... +.+..+||+|+.+++.++|++|++. +.+||+|+|++.|+++|+++.+||+.+|++.||+
T Consensus 25 ~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~ 100 (613)
T COG1022 25 RVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPI 100 (613)
T ss_pred HhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEec
Confidence 3467888889987654 5778999999999999999999999 9779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC---ceEEEc---CCCCCCCCCC----CCCcccHH
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL---KAIVLP---AIGNDVGIPL----REQDLSWK 333 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~----~~~~~~~~ 333 (693)
.++.+++.++++|+++++++++++.... ......+....+. .....+ .......... ..+...+
T Consensus 101 y~t~~~~~~~~iL~~se~~~i~~e~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 101 YSTSTPEQLAYILNESESKVIFVENQEL-----LDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred CCCCCHHHHHHHHhcCCceEEEecchHH-----HHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 9999999999999999999999997421 1112222221111 000000 0000000000 0001111
Q ss_pred HHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcC-CCCCCEEEEeCCccccchh
Q 005501 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGP 412 (693)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~ 412 (693)
.+ ... .......+..+||+|.|+|||||||.|||||++|+|++..+.......+ ++++|++++++|++|.+..
T Consensus 175 ~~-~~~-----~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 175 LI-DSA-----GLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred hh-ccc-----ccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHH
Confidence 11 110 0111124567899999999999999999999999999999999999997 9999999999999999998
Q ss_pred HH-HHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc----CC---------------------
Q 005501 413 VI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----LE--------------------- 466 (693)
Q Consensus 413 ~~-~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~----~~--------------------- 466 (693)
.. ....+..|+++.. ..++..+++.+++.++|++..+|.+|+.+.+... ..
T Consensus 249 ~~~~~~~~~~g~~~~~---~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 249 AFEGGLALYGGVTVLF---KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHhhcceEEEe---cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 54 4444445544444 3467899999999999999999999987743200 00
Q ss_pred ----------------------CCCC-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCc
Q 005501 467 ----------------------GLDW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (693)
Q Consensus 467 ----------------------~~~l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (693)
...+ .++|++++||.++++++..+++.. ++++.++||+|||+...+...+ ....
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~-~~~~ 402 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPP-DRFV 402 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEccc-cCcc
Confidence 0001 378999999999999999999877 6999999999999986555444 4466
Q ss_pred cCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEE
Q 005501 524 FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIK 598 (693)
Q Consensus 524 ~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~ 598 (693)
.+++|+|+|+++++|.|+ |||.| ++||++ +++.|++.|..+. ||+|||+|.
T Consensus 403 ~gtvG~p~p~~evKI~d~------------GEilVRG~~Vm~GYyk------~pe~Taeaf~~DG------Wf~TGDlg~ 458 (613)
T COG1022 403 LGTVGKPLPGIEVKIADD------------GEILVRGPNVMKGYYK------NPEATAEAFTEDG------WFRTGDLGE 458 (613)
T ss_pred cCCcCCcCCCceEEEccC------------ceEEEecchhcchhcC------ChHHHhhhccccC------CcccCceeE
Confidence 788999999999999994 89998 567777 7779999998654 999999999
Q ss_pred EecCCcEEEEeecCCccc-cCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 599 RTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 599 ~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+|+||+|.++||++|.|| .+|++|.|..||+.+ +.+|-|.+++|++ ++. ..++|.|+++.
T Consensus 459 ~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l-~~~~~I~qi~vvg-~~k----~~~~AlIvp~~ 519 (613)
T COG1022 459 LDEDGYLVITGRKKELIKLSNGKNIAPEPIESKL-AKSPLIEQICVVG-DDK----KFLVALIVPDF 519 (613)
T ss_pred EcCCCcEEEeecccceEECCCCcccChHHHHHHH-hcCCCeeEEEEEe-cCC----cceEEEEeCCH
Confidence 999999999999999999 579999999999999 5999999999998 321 68999999864
No 101
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2e-57 Score=519.39 Aligned_cols=447 Identities=19% Similarity=0.217 Sum_probs=335.9
Q ss_pred CCCCCCcEEEEEec-CCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++++|+++|+.+.. ..+..+.+..+||+||.++++++|++|.+. +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 52 ~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 52 VEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPL 131 (660)
T ss_pred HHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 46899999997642 111223455689999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCC---CCCCCCcccHHHHhcc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG---IPLREQDLSWKDFLSS 338 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 338 (693)
++.++++++.+++++++++++|+++... ...+.......+. .++.+........ ........+|+++...
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKI-----KELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHM 206 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHH-----HHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHh
Confidence 9999999999999999999999986421 0011111111111 2333321110000 0001123467776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh-----cCCCCCCEEEEeCCccccchhH
Q 005501 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-----IDLKVGDVYCWPTNLGWVMGPV 413 (693)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~ 413 (693)
.... + .......++|+++|+|||||||.||||+++|+++...+...... .+++++|++++++|++|.++..
T Consensus 207 ~~~~--~--~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~ 282 (660)
T PLN02430 207 GKEN--P--SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRM 282 (660)
T ss_pred hccC--C--CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHH
Confidence 3321 1 11122357999999999999999999999999998776654221 2567899999999999999876
Q ss_pred HHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc-----------------------------
Q 005501 414 ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----------------------------- 464 (693)
Q Consensus 414 ~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~----------------------------- 464 (693)
..+.++..|++++++.. ++..+++.|++.++|++.++|.+++.+.+...
T Consensus 283 ~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (660)
T PLN02430 283 IEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGY 360 (660)
T ss_pred HHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 55667899999988753 56789999999999999999999987764200
Q ss_pred --CCCC---C----------C-ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccC
Q 005501 465 --LEGL---D----------W-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS 528 (693)
Q Consensus 465 --~~~~---~----------l-~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG 528 (693)
.... + + ++||.+++||+++++++.++++ .+..+.++++||+||+++..+...+......+++|
T Consensus 361 ~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG 439 (660)
T PLN02430 361 SHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVG 439 (660)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCcc
Confidence 0000 0 1 5799999999999999866654 44456899999999998755544433334468999
Q ss_pred CCCCCceEEEEC--CCC-CCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEe
Q 005501 529 TATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 600 (693)
Q Consensus 529 ~p~~~~~~~ild--~~~-~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~ 600 (693)
+|.+++++++.| +.| .+++.|. .|||+| ..||++ +++.|++.|. + | ||+|||+|++|
T Consensus 440 ~p~~~~evki~d~~~~g~~~~~~~~--~GEi~vrg~~v~~GY~~------~~e~t~~~~~-d----G--w~~TGDig~~d 504 (660)
T PLN02430 440 APAVYNELRLEEVPEMGYDPLGEPP--RGEICVRGKCLFSGYYK------NPELTEEVMK-D----G--WFHTGDIGEIL 504 (660)
T ss_pred CCCCceEEEEEEcCCcCcccCCCCC--cceEEecCCCccccccC------ChHHhhhhhh-c----c--ceeccceEEEC
Confidence 999999999987 333 3455544 499998 457776 5567777772 1 3 99999999999
Q ss_pred cCCcEEEEeecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 601 VGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 601 ~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++.. .+ +.++|+|++++
T Consensus 505 ~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~-~~p~V~~~~V~G~~---~~-~~~~A~vv~~~ 564 (660)
T PLN02430 505 PNGVLKIIDRKKNLIKLSQGEYVALEYLENVYG-QNPIVEDIWVYGDS---FK-SMLVAVVVPNE 564 (660)
T ss_pred CCCcEEEEEcccccEEcCCCcEEchHHHHHHHh-cCCCeeEEEEEecC---Cc-ceEEEEEEcCH
Confidence 99999999999999996 699999999999995 99999999999832 23 78999999864
No 102
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.5e-56 Score=498.03 Aligned_cols=456 Identities=19% Similarity=0.183 Sum_probs=361.9
Q ss_pred EEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHH
Q 005501 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE 271 (693)
Q Consensus 193 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~ 271 (693)
.|++.+++ .+||.||.++++++|++|.+. +++|++|+++++|++++++++|||+++|++++|++|.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 46666555 999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCc--eEEEcCCCC--------CCCCCCCCCcccHHHHhcccCC
Q 005501 272 IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGN--------DVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 272 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
+..+++++++++++++..... .+.+..+.. .+....... ............|+++......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLH---------GLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP 145 (509)
T ss_pred HHHHHhccCCcEEEEccchhh---------hhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc
Confidence 999999999999999875321 111111111 111110000 0000111233455555432211
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHH---HHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHH
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (693)
.....++++++++|||||||.||||+++|.+.. .........+++.++++++...|+.|..+....+.+
T Consensus 146 --------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 217 (509)
T PRK12406 146 --------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRA 217 (509)
T ss_pred --------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHH
Confidence 112346899999999999999999999876543 333334456788999999999999999887666678
Q ss_pred HHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHhhCC
Q 005501 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (693)
Q Consensus 419 L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~ 496 (693)
+..|+++++.+ ..++..+++.++++++|++.++|+++..|+.... ....+++++|.+++||+++++++.+++.+.+
T Consensus 218 ~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~- 295 (509)
T PRK12406 218 GRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW- 295 (509)
T ss_pred HhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-
Confidence 89999998876 4678899999999999999999999999986532 2345678999999999999999999888765
Q ss_pred CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-c-----ccCCCccccc
Q 005501 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-P-----LYLGASDRLL 570 (693)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-~-----gy~~~~~~~~ 570 (693)
++.+++.||+||++.+.+..........+++|+|++++.++|+|+++++++.|+. ||+++. + +|.+
T Consensus 296 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~~~y~~------ 367 (509)
T PRK12406 296 GPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEI--GEIYSRIAGNPDFTYHN------ 367 (509)
T ss_pred CCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCc--eEEEEECCccccccccC------
Confidence 5789999999999875544333333445789999999999999999999999985 999983 2 3333
Q ss_pred ccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCC
Q 005501 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (693)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~ 650 (693)
+++.++..+ .++||+|||+|++++||++++.||.||+||++|++|++.|||++|. ++|+|.+++|++.++..
T Consensus 368 ~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~ 439 (509)
T PRK12406 368 KPEKRAEID-------RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAE 439 (509)
T ss_pred Cchhccccc-------CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccc
Confidence 333444332 1239999999999999999999999999999999999999999996 89999999999998877
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+ +.++++|++.++...+.++++++++++|++|++|..++.
T Consensus 440 ~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~ 480 (509)
T PRK12406 440 FG-EALMAVVEPQPGATLDEADIRAQLKARLAGYKVPKHIEI 480 (509)
T ss_pred cC-ceeEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEE
Confidence 67 889999998876566789999999999999999998775
No 103
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.3e-56 Score=507.33 Aligned_cols=469 Identities=20% Similarity=0.236 Sum_probs=359.4
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+++.+. ++||+||.++++++|.+|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 30 ~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 30 AVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred HhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEec
Confidence 467999999998765 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc---------CCCceEEEcCCCCC---CCCCCCCCcccH
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---------APLKAIVLPAIGND---VGIPLREQDLSW 332 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~~~~~~~~~~~ 332 (693)
|.++.+++.+++++++++++|+++.... ....+... ....++++...... .......+...|
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFFT------LAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhhh------HHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 9999999999999999999999875421 11111111 11123333211100 000111234456
Q ss_pred HHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh
Q 005501 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (693)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (693)
.+++..... .... ......+++++++|||||||.||||+++|+++..........++++.++++++.+|++|..++
T Consensus 176 ~~~~~~~~~---~~~~-~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDP---EFAW-KPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhcccc---cccc-CCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhH
Confidence 666553221 0000 112234577889999999999999999999987666555566788899999999999999887
Q ss_pred HHHHH-HHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCC-CCCccccEEEeecCCCCcchHHH
Q 005501 413 VILFS-SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDLW 490 (693)
Q Consensus 413 ~~~~~-~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~-~~l~~lr~v~~gGe~l~~~~~~~ 490 (693)
...+. ++..|.++++ . ..++..+++.++++++|++..+|+++..|.+...... .+++++|.++++|+++++.+.++
T Consensus 252 ~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 252 CFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred HHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 44443 4555555544 3 4678899999999999999999999999987543222 25688999999999999999888
Q ss_pred HHhhCCCCceecccccccccceeccCCc---------CC-CCccCccCCCCCCce-EEEEC-CCCCCCCCCCCceeeEEE
Q 005501 491 LSSKAWYNAIIESCGGTELSSAYIQGSL---------LQ-PQAFGAFSTATMTAG-LVILD-ECGVPYPDDQPCVGEVGL 558 (693)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~---------~~-~~~~~~iG~p~~~~~-~~ild-~~~~~~p~G~~giGel~v 558 (693)
+.+. +.++++.||+||+++.++.... .. .......|.+.++.. ++|+| ++++++|.+...+|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 7754 5789999999998643332210 00 011135688888876 89999 568888764211599998
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
.+||++ +++.|++.|.. | ||+|||+|++++||+++|+||.||+||++|+||+|.|||++|.
T Consensus 408 ~g~~~~~GY~~------~~~~t~~~~~~-----g--~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~- 473 (567)
T PLN02479 408 RGNMVMKGYLK------NPKANEEAFAN-----G--WFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVY- 473 (567)
T ss_pred eccchhhhhhc------CcccccchhcC-----C--ceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHH-
Confidence 467777 55577777742 2 9999999999999999999999999999999999999999995
Q ss_pred cCcccceeEEEeecCCCCCceEEEEEEEecCCCC-----CChHHHHHHHHHHHHhhcCCCcee
Q 005501 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFT-----SQPDKLKMIFSKAIQSKLNPLFKV 691 (693)
Q Consensus 634 ~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~-----~~~~~l~~~l~~~L~~~m~P~~~v 691 (693)
.||.|.+++|++.++...+ +.+++++++.++.. ...++|+++++++||.|+.|..+.
T Consensus 474 ~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~ 535 (567)
T PLN02479 474 THPAVLEASVVARPDERWG-ESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVV 535 (567)
T ss_pred hCcccceeeEEeccchhcC-ceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEE
Confidence 9999999999999887766 89999999876532 234689999999999999998765
No 104
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-56 Score=502.94 Aligned_cols=469 Identities=20% Similarity=0.208 Sum_probs=360.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+++|+.+.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 99 (545)
T PRK08162 28 AEVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLN 99 (545)
T ss_pred HHHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEeccc
Confidence 368999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC-ceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
|.++.+++..++++++++.++++.... ..........+. +.+.+.............+..++..+......
T Consensus 100 ~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 171 (545)
T PRK08162 100 TRLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP-- 171 (545)
T ss_pred cccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc--
Confidence 999999999999999999999987542 112222111222 23333322111000001123345655543211
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (693)
..........+++++|+|||||||.||||+++|+++..........+++..++++++..|+.|..+....+...+.|+
T Consensus 172 --~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g 249 (545)
T PRK08162 172 --DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAG 249 (545)
T ss_pred --cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHcc
Confidence 001111223467999999999999999999999998666655556677888999999999999888754444445566
Q ss_pred EEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecc
Q 005501 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (693)
+.++.. ..++..+++.++++++|++.++|++++.|++........+.+++.++++|+++++...+++... ++++++.
T Consensus 250 ~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 250 TNVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred EEEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 665554 4678999999999999999999999999987644333345566777899999998888877654 6889999
Q ss_pred cccccccceeccCCcCC----------CCccCccCCCCC-CceEEEECC-CCCCCCCC-CCceeeEEE-----ecccCCC
Q 005501 504 CGGTELSSAYIQGSLLQ----------PQAFGAFSTATM-TAGLVILDE-CGVPYPDD-QPCVGEVGL-----FPLYLGA 565 (693)
Q Consensus 504 YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~-~~~~~ild~-~~~~~p~G-~~giGel~v-----~~gy~~~ 565 (693)
||+||+++.++.+.... .....+.|.+.+ +..++|+|+ +++++|.+ +. +|||++ ..||++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~-~Gel~v~g~~~~~gY~~- 404 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGET-IGEIMFRGNIVMKGYLK- 404 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCc-eeEEEEecCcchhhhcC-
Confidence 99999865443321110 011234566655 346889994 68888763 32 599998 356766
Q ss_pred cccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEe
Q 005501 566 SDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAIS 645 (693)
Q Consensus 566 ~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~ 645 (693)
+++.+...|.. +||+|||+|++++||+++|+||.||+||++|+||+|.|||++|. .||+|.+++|++
T Consensus 405 -----~~~~~~~~~~~-------g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~ 471 (545)
T PRK08162 405 -----NPKATEEAFAG-------GWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLY-RHPAVLVAAVVA 471 (545)
T ss_pred -----ChhhhHHHhhC-------CCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHH-hCCcccEEEEEe
Confidence 45566666641 29999999999999999999999999999999999999999995 999999999999
Q ss_pred ecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcee
Q 005501 646 VSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV 691 (693)
Q Consensus 646 ~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v 691 (693)
.+++..+ +.+++||+++++...+.++++++++++|+.|++|..++
T Consensus 472 ~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~ 516 (545)
T PRK08162 472 KPDPKWG-EVPCAFVELKDGASATEEEIIAHCREHLAGFKVPKAVV 516 (545)
T ss_pred eeccccC-ceEEEEEEeCCCCCCCHHHHHHHHHHhcccccCCcEEE
Confidence 9887776 89999999988766778899999999999999998775
No 105
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-56 Score=497.76 Aligned_cols=464 Identities=19% Similarity=0.179 Sum_probs=364.8
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
.++++|+++|+++...+ +.+||+||.++++++|++|++. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 6 HAQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hHhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 34789999999875331 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCC--ceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
++.++.+++.++++++++++++++.... ..........+. ..+.+...... .....+.+.......
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 147 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPGVRHRLVLDGDGEL------EGFVGYAEAVAGLPA 147 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCCceEEEEecCCCCC------cccccHHHHhcCCCC
Confidence 9999999999999999999999987532 111112222211 12222111100 111223333221111
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEec--chhHH---HHHHHhchhcCCCCCCEEEEeCCccccchhHHHH
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILF 416 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~s--h~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 416 (693)
....+.++.++++|||||||.||||+++ |.++. +........+++.+++++++..|++|+.++...+
T Consensus 148 --------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~ 219 (511)
T PRK13391 148 --------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVM 219 (511)
T ss_pred --------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHH
Confidence 0112345679999999999999999964 65543 2233344567788899999999999998887778
Q ss_pred HHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc--CCCCCCccccEEEeecCCCCcchHHHHHhh
Q 005501 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (693)
Q Consensus 417 ~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~ 494 (693)
.++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++.+.
T Consensus 220 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~ 298 (511)
T PRK13391 220 LVIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDW 298 (511)
T ss_pred HHHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHH
Confidence 8999999999986 4678999999999999999999999998876532 223457899999999999999999888876
Q ss_pred CCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe----cccCCCccccc
Q 005501 495 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF----PLYLGASDRLL 570 (693)
Q Consensus 495 ~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~----~gy~~~~~~~~ 570 (693)
+ +..+++.||+||++..............+++|+|+++ .++|+|+++++++.|+. |||++. .+|++
T Consensus 299 ~-g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~--Gel~~~g~~~~gy~~------ 368 (511)
T PRK13391 299 W-GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEP--GTIWFEGGRPFEYLN------ 368 (511)
T ss_pred c-CCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCcceEEcC------
Confidence 5 5789999999999875443332223445789999999 69999999999999985 999983 23333
Q ss_pred ccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCC
Q 005501 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (693)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~ 650 (693)
+++.++..|..+ .+||+|||+|++++||.+++.||.||++|++|++|++.|||++|. +||.|.+|+|+++++..
T Consensus 369 ~~~~~~~~~~~~-----~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~-~~~~v~~~~v~~~~~~~ 442 (511)
T PRK13391 369 DPAKTAEARHPD-----GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLI-THPKVADAAVFGVPNED 442 (511)
T ss_pred ChhHhHHhhccC-----CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEecCCcc
Confidence 455666655432 249999999999999999999999999999999999999999996 89999999999998887
Q ss_pred CCceEEEEEEEecCCCCC---ChHHHHHHHHHHHHhhcCCCceec
Q 005501 651 GGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~---~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+ +.+++++++.++... ..++++++++++||.|+.|..+..
T Consensus 443 ~g-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~ 486 (511)
T PRK13391 443 LG-EEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDF 486 (511)
T ss_pred cC-ceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEE
Confidence 77 889999998764322 247899999999999999998764
No 106
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-56 Score=483.78 Aligned_cols=388 Identities=13% Similarity=0.098 Sum_probs=332.5
Q ss_pred EEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 005501 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (693)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l 272 (693)
++++.++ ++||+||.++++++|+.|. . +++|++|+|+++|++++++++||++++|++++|+|+..+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 3566666 9999999999999999985 6 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCcc
Q 005501 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (693)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (693)
..++++++++.+++++... . ... ...
T Consensus 72 ~~~~~~~~~~~~i~~~~~~------~---------------------------------~~~---------------~~~ 97 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDF------T---------------------------------KLE---------------AVN 97 (414)
T ss_pred HHHHHhCCCCEEEecCccc------c---------------------------------ccc---------------CCC
Confidence 9999999999999875210 0 000 001
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEecCC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGS 431 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~ 431 (693)
..+++++||+|||||||.||||+++|+++.+.+......+++..+|+++..+|++|++++ ..++.+|..|+++++.+ .
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~ 176 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-N 176 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-C
Confidence 245789999999999999999999999999888877788888999999999999999987 56889999999999986 4
Q ss_pred CChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccc
Q 005501 432 PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511 (693)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 511 (693)
.++..+++.++++++|++.++|+++..+.+.... ..+++.+++||+++++++.+.+++. ..+++|.||+||++.
T Consensus 177 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 177 KNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGC 250 (414)
T ss_pred CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCC
Confidence 6788999999999999999999999999875321 1368899999999999998888765 468999999999986
Q ss_pred eeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccccCCCceee
Q 005501 512 AYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (693)
Q Consensus 512 ~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~y 591 (693)
...... ....+++|+|++++++++.++. |.+ ||+++.. +.+||
T Consensus 251 ~~~~~~---~~~~~~~G~p~~~~~~~~~~~~------~~~--gel~v~~--------------------------~~~~~ 293 (414)
T PRK08308 251 VSICPD---MKSHLDLGNPLPHVSVSAGSDE------NAP--EEIVVKM--------------------------GDKEI 293 (414)
T ss_pred eeecCC---CCCCCccCccCCCeEEEEecCC------CCC--ceEEEEc--------------------------CCceE
Confidence 433221 2345679999999999997642 443 8998842 12399
Q ss_pred eecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChH
Q 005501 592 RHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPD 671 (693)
Q Consensus 592 rTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~ 671 (693)
+|||+|++++||+++|+||.|++||++|+||+|.|||++|. ++|+|.+|+|++.+++..+ +.++++++.+. ..+.+
T Consensus 294 ~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~--~~~~~ 369 (414)
T PRK08308 294 FTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHE--EIDPV 369 (414)
T ss_pred ECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC--CCCHH
Confidence 99999999999999999999999999999999999999995 9999999999999988777 88999998765 46778
Q ss_pred HHHHHHHHHHHhhcCCCceec
Q 005501 672 KLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 672 ~l~~~l~~~L~~~m~P~~~v~ 692 (693)
+++++++++|+.|++|..++.
T Consensus 370 ~l~~~l~~~l~~~~~P~~i~~ 390 (414)
T PRK08308 370 QLREWCIQHLAPYQVPHEIES 390 (414)
T ss_pred HHHHHHHHhCccccCCcEEEE
Confidence 999999999999999988764
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.1e-56 Score=491.66 Aligned_cols=412 Identities=16% Similarity=0.160 Sum_probs=341.1
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 13 a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 13 AQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLN 84 (458)
T ss_pred HHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecC
Confidence 368999999997766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (693)
+..+.+++..+++++++++++++++... ...+ . ...+.. ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~-----------~-------------~~~~~~-----~~--- 125 (458)
T PRK09029 85 PQLPQPLLEELLPSLTLDFALVLEGENT-------FSAL-----------T-------------SLHLQL-----VE--- 125 (458)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcccc-------hhhc-----------c-------------cccccc-----cc---
Confidence 9999999999999999999999875310 0000 0 000000 00
Q ss_pred CCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCE
Q 005501 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (693)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (693)
........++++++++|||||||.||||+++|++++..+......+++.++|+++...|++|.+++..++.+|+.|++
T Consensus 126 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~ 203 (458)
T PRK09029 126 --GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGAT 203 (458)
T ss_pred --ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCce
Confidence 011123457899999999999999999999999999988877788899999999999999999998777789999999
Q ss_pred EEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccc
Q 005501 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (693)
Q Consensus 425 lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (693)
+++.+. ..+++.+ .++|.+..+|+++..++..... ..++|.+++||+++++.+.+++... +.++++.|
T Consensus 204 v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~Y 271 (458)
T PRK09029 204 LVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGY 271 (458)
T ss_pred EEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccc
Confidence 998764 4566776 4899999999999998876432 3479999999999999998887654 68899999
Q ss_pred ccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccc
Q 005501 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (693)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f 579 (693)
|+||++...+.... ....++|+|+++++++|+| |||++ ..||++. ++.+..
T Consensus 272 G~tE~~~~~~~~~~---~~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~gY~~~------~~~~~~-- 327 (458)
T PRK09029 272 GLTEMASTVCAKRA---DGLAGVGSPLPGREVKLVD-------------GEIWLRGASLALGYWRQ------GQLVPL-- 327 (458)
T ss_pred cccccCcceeccCC---CCCCCCCCCCCCCEEEEeC-------------CEEEEecCceeeeeecC------cccccc--
Confidence 99999864333221 2234699999999999986 56665 5677763 223321
Q ss_pred cccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEE
Q 005501 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (693)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~ 659 (693)
..+.+||+|||+|+++ ||+++|.||+||+||++|++|+|.|||++|. +||+|.+|+|++.+++..+ +.++++
T Consensus 328 -----~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~ 399 (458)
T PRK09029 328 -----VNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVIN-QHPLVQQVFVVPVADAEFG-QRPVAV 399 (458)
T ss_pred -----ccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHh-cCCCcceEEEEccCCcccC-ceEEEE
Confidence 1234599999999999 9999999999999999999999999999995 9999999999999998877 899999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
|+.+. ..+.++|+++|+++||.|+.|..++.
T Consensus 400 v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~ 430 (458)
T PRK09029 400 VESDS--EAAVVNLAEWLQDKLARFQQPVAYYL 430 (458)
T ss_pred EEcCc--ccCHHHHHHHHHhhchhccCCeEEEE
Confidence 99774 35678999999999999999988764
No 108
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-56 Score=512.99 Aligned_cols=457 Identities=18% Similarity=0.160 Sum_probs=339.3
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++||++|+++.+. ..+.++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 59 a~~~pd~~a~~~~~~--~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 136 (624)
T PRK12582 59 AAEAPDRPWLAQREP--GHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVS 136 (624)
T ss_pred HHHCCCchheecccC--CCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeecc
Confidence 478999999987542 113356999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCH-----HHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhccc
Q 005501 265 DSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (693)
Q Consensus 265 p~~~~-----~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (693)
|.++. +++.+++++++++++|+++... ..............++.+..... ......+.++....
T Consensus 137 p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~ 205 (624)
T PRK12582 137 PAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP-----FARALAALDLLDVTVVHVTGPGE------GIASIAFADLAATP 205 (624)
T ss_pred CccccccCCHHHHHHHHHhcCCcEEEecCHHH-----HHHHHHhhhhcCceEEEEcCCCc------ccccccHHHHhhcC
Confidence 99985 8999999999999999986310 00000001111122333321110 01223455554322
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCC---CCEEEEeCCccccchh-HHH
Q 005501 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV---GDVYCWPTNLGWVMGP-VIL 415 (693)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~-~~~ 415 (693)
.. ...........++++++|+|||||||.||||+++|+++.+.+......+.... +++++.++|++|.++. ..+
T Consensus 206 ~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 283 (624)
T PRK12582 206 PT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANF 283 (624)
T ss_pred Cc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHH
Confidence 11 00001112245789999999999999999999999999877665544444444 5799999999999987 456
Q ss_pred HHHHHcCCEEEEecCCCChh---hHHHHHHHcCCcEEeechHHHHHHHhcCcCC----CCCCccccEEEeecCCCCcchH
Q 005501 416 FSSFLNGATLALYQGSPLER---SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE----GLDWTKIRSFASTGETSNVDDD 488 (693)
Q Consensus 416 ~~~L~~G~~lvi~~~~~~~~---~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~----~~~l~~lr~v~~gGe~l~~~~~ 488 (693)
+.+|..|+++++.+..+++. .+++.++++++|++.++|++++.|++..... ..++++||.+++||+++++++.
T Consensus 284 ~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~ 363 (624)
T PRK12582 284 NGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLY 363 (624)
T ss_pred HHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHH
Confidence 78899999999976444433 4567788999999999999999887542111 1246799999999999999999
Q ss_pred HHHHhhC----C-CCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----
Q 005501 489 LWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL----- 558 (693)
Q Consensus 489 ~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v----- 558 (693)
+++.+.+ . +++++|.||+||++.+.+.... .....+++|+|++|++++|+ |.|+ +|||++
T Consensus 364 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~-------~~G~--~GEl~vrg~~v 433 (624)
T PRK12582 364 ERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW-DTERVGLIGLPLPGVELKLA-------PVGD--KYEVRVKGPNV 433 (624)
T ss_pred HHHHHHHHhhcCCCceEEeccccccccceeecccC-CCCCCCCCCcCCCCcEEEEc-------cCCC--ceEEEEECCcc
Confidence 8887652 1 3579999999999865442222 23456789999999999985 4566 499998
Q ss_pred ecccCCCcccccccccccccccccccCCCceeeeecceEEE-e---cCCcEEEEeecCCcccc-CCeeeehHHHH--HHH
Q 005501 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR-T---VGGYIIVQGRADDTMNL-GGIKTSSVEIE--RVC 631 (693)
Q Consensus 559 ~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~-~---~dG~l~~~GR~dd~ik~-~G~ri~~~eIE--~~L 631 (693)
..||++ +++.|++.|.. ++||+|||+|++ + +||+|+|+||+||+||+ +|++|+|.||| .++
T Consensus 434 ~~GY~~------~p~~t~~~f~~------dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l 501 (624)
T PRK12582 434 TPGYHK------DPELTAAAFDE------EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVA 501 (624)
T ss_pred cccccC------CccchhhhcCc------cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHH
Confidence 456776 55577777753 239999999999 4 46999999999999995 69999999885 677
Q ss_pred hccCcccceeEEEeecCCCCCceEEEEEEEecC----------CC----CCChHHHHHHHHHHHHhhc
Q 005501 632 DQADESILETAAISVSPAGGGPEVLVIFVVLKK----------GF----TSQPDKLKMIFSKAIQSKL 685 (693)
Q Consensus 632 ~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~----------~~----~~~~~~l~~~l~~~L~~~m 685 (693)
. +||.|.+|+|++++++ .+.+.|++.. +. .++.++++++++++|..+.
T Consensus 502 ~-~~p~V~~a~VvG~~~~-----~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 563 (624)
T PRK12582 502 A-CSPVIHDAVVAGQDRA-----FIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHN 563 (624)
T ss_pred h-cCcchheEEEEcCCCC-----cEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHH
Confidence 4 8999999999998653 4445544321 11 1244689999999999987
No 109
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-55 Score=492.45 Aligned_cols=444 Identities=19% Similarity=0.133 Sum_probs=353.6
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEee
Q 005501 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 287 (693)
.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cceeeCCccccchhhHhhcCC--CceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEecc
Q 005501 288 DFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365 (693)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TS 365 (693)
+... .......+..+ ...+.+.... ......|++....... ......++.++++|||
T Consensus 91 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TS 149 (502)
T PRK08276 91 AALA------DTAAELAAELPAGVPLLLVVAGP-------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSS 149 (502)
T ss_pred cchh------hHHHHHhhhccccccEEEEeCCC-------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECC
Confidence 7532 11112222221 1222221100 0112334444332111 1112456789999999
Q ss_pred CCCCCcceEEecchhHHHH------HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHH
Q 005501 366 GTTGEPKAIPWTQLSSIRC------TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK 439 (693)
Q Consensus 366 GSTG~PKgV~~sh~~l~~~------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~ 439 (693)
||||.||||+++|+++... .......+....++++++..|+.|.+++...+.++..|+++++.+ ..++..+++
T Consensus 150 GtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~ 228 (502)
T PRK08276 150 GTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALA 228 (502)
T ss_pred CCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHH
Confidence 9999999999998875422 122222233357789999999999998877778999999998876 467899999
Q ss_pred HHHHcCCcEEeechHHHHHHHhcCcC--CCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCC
Q 005501 440 FVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS 517 (693)
Q Consensus 440 ~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (693)
.++++++|++.++|+++..+++.... ...+++++|.+++||++++.++.+++.+.+ +..+++.||+||++.+++...
T Consensus 229 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 229 LIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC
Confidence 99999999999999999999876432 345688999999999999999999988776 577999999999987544433
Q ss_pred cCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEe-----cccCCCcccccccccccccccccccCCCceeee
Q 005501 518 LLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRR 592 (693)
Q Consensus 518 ~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~-----~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yr 592 (693)
.......+++|+|+ ++.++|+|+++++++.|+. ||+++. .||++ +++.+.+.|.++ +||+
T Consensus 308 ~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~~~~~~~~------~~~~ 372 (502)
T PRK08276 308 EDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEI--GTVYFEMDGYPFEYHN------DPEKTAAARNPH------GWVT 372 (502)
T ss_pred ccccccCCCcceec-ccEEEEECCCCCCCcCCCc--eEEEEECCCccchhcC------CHHHHHHHhcCC------Ccee
Confidence 32234457899999 8899999999999999984 999994 34444 445666666543 3999
Q ss_pred ecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCCh--
Q 005501 593 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP-- 670 (693)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~-- 670 (693)
|||+|++++||.+++.||+|++||++|++|++.|||.+|. +||+|.+++|+++.++..+ +.+++||+++++...+.
T Consensus 373 TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 450 (502)
T PRK08276 373 VGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPADGADAGDAL 450 (502)
T ss_pred ecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECCCCCCChhh
Confidence 9999999999999999999999999999999999999996 8999999999999888777 89999999987644332
Q ss_pred -HHHHHHHHHHHHhhcCCCceec
Q 005501 671 -DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 671 -~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++++++++++|+.+|.|..++.
T Consensus 451 ~~~i~~~~~~~l~~~~~p~~i~~ 473 (502)
T PRK08276 451 AAELIAWLRGRLAHYKCPRSIDF 473 (502)
T ss_pred HHHHHHHHHhhccCCCCCcEEEE
Confidence 3799999999999999988875
No 110
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2e-55 Score=536.82 Aligned_cols=458 Identities=18% Similarity=0.176 Sum_probs=356.0
Q ss_pred CCC-CCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKE-DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~-pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
+++ |+++|+.+.+. +++||+||+++++++|++|++-+++||+|+++++|++++++++|||+++|++++|+||
T Consensus 642 ~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 714 (1140)
T PRK06814 642 KIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLKKNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINF 714 (1140)
T ss_pred HHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCC
Confidence 455 46788876433 2899999999999999999633999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC--CceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCC
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (693)
.++.+++.+++++++++++++++......+ .....+..+ ..++.++.... ....++.+...... .
T Consensus 715 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~-~ 781 (1140)
T PRK06814 715 SAGIANILSACKAAQVKTVLTSRAFIEKAR----LGPLIEALEFGIRIIYLEDVRA--------QIGLADKIKGLLAG-R 781 (1140)
T ss_pred CCCHHHHHHHHHHcCCCEEEecHHHHhhhc----chhHHHHhccCceEEEehHhhc--------cCChHHHHHHHhhc-c
Confidence 999999999999999999999875432111 011111111 12232221110 00111111110000 0
Q ss_pred CCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcC
Q 005501 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (693)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G 422 (693)
.+. .......++|+++|+|||||||.||||+++|+++.+.+......++++++|++++.+|+.|.+++ +.++.++..|
T Consensus 782 ~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 860 (1140)
T PRK06814 782 FPL-VYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSG 860 (1140)
T ss_pred CCc-cccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcC
Confidence 000 01113467999999999999999999999999999888888888899999999999999999998 7788999999
Q ss_pred CEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceec
Q 005501 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (693)
Q Consensus 423 ~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (693)
+++++.+...+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||++++++.+++.+.+ +++++|
T Consensus 861 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~ 937 (1140)
T PRK06814 861 VKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILE 937 (1140)
T ss_pred CEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEe
Confidence 99999875556677889999999999999999999987653 345678999999999999999988888776 678999
Q ss_pred ccccccccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccc
Q 005501 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (693)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~ 577 (693)
.||+||++...+...+ .....+++|+|++|+++++.+..+ .|+ .|||++ ..||++.+ + ..
T Consensus 938 ~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~~----~~~--~Gel~v~g~~~~~gY~~~~------~--~~ 1002 (1140)
T PRK06814 938 GYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVPG----IDE--GGRLFVRGPNVMLGYLRAE------N--PG 1002 (1140)
T ss_pred ccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecCC----CCC--ceEEEEeCCCcchhhcCCC------C--CC
Confidence 9999999875544332 234567899999999999987543 245 399998 34555421 1 11
Q ss_pred cccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
.+.. .+++||+|||+|++|+||+++|+||.||+||++|+||+|.|||++|. +||+|.+++|++++++..| +.++
T Consensus 1003 ~~~~----~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~ 1076 (1140)
T PRK06814 1003 VLEP----PADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAA-ELWPDALHAAVSIPDARKG-ERII 1076 (1140)
T ss_pred cccc----CCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHH-hcCCcccEEEEEcccCCCC-ceEE
Confidence 1111 13459999999999999999999999999999999999999999995 9999999999999998887 7888
Q ss_pred EEEEecCCCCCChHHHHHHHHHH-HHhhcCCCceec
Q 005501 658 IFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPLFKVW 692 (693)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~-L~~~m~P~~~v~ 692 (693)
+++.. .+.+.++++++++++ |++|++|..++.
T Consensus 1077 ~~~~~---~~~~~~~l~~~~~~~~l~~~~~P~~i~~ 1109 (1140)
T PRK06814 1077 LLTTA---SDATRAAFLAHAKAAGASELMVPAEIIT 1109 (1140)
T ss_pred EEEcC---CCcCHHHHHHHHHHcCCCcccCCcEEEE
Confidence 77652 245678999999975 999999998764
No 111
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-55 Score=493.76 Aligned_cols=439 Identities=18% Similarity=0.175 Sum_probs=341.5
Q ss_pred ceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCC-------HHHHHHHHHh
Q 005501 207 VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA-------AREIATRLRV 278 (693)
Q Consensus 207 ~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~-------~~~l~~~l~~ 278 (693)
.+.+||+||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|+|+..+ .+++.++++.
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 35899999999999999999999 999999999999999999999999999999999987543 6899999999
Q ss_pred cCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCe
Q 005501 279 SKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAV 358 (693)
Q Consensus 279 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (693)
++++++|+++... +.+........ ... ..++.++...... ........++++
T Consensus 127 ~~~~~il~~~~~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~ 178 (579)
T PRK09192 127 AQPAAIITPDELL------PWVNEATHGNP-LLH----------------VLSHAWFKALPEA-----DVALPRPTPDDI 178 (579)
T ss_pred cCCCEEEeChHHH------HHHHHhhcccc-ccc----------------eeehhhhcccCCC-----ccccCCCCCCCe
Confidence 9999999987532 11111110110 000 1123333221111 111123456899
Q ss_pred EEEEeccCCCCCcceEEecchhHHHHHHHhch-hcCCCCCCEEEEeCCccccchhHH-HHHHHHcCCEEEEecCC---CC
Q 005501 359 VNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PL 433 (693)
Q Consensus 359 a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lvi~~~~---~~ 433 (693)
+||+|||||||.||||+++|++++..+..... .+++.++|+++++.|++|++++.. ++.++..|+++++.+.. .+
T Consensus 179 a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~ 258 (579)
T PRK09192 179 AYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARR 258 (579)
T ss_pred EEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHC
Confidence 99999999999999999999999888877766 788999999999999999999854 66788999998776521 25
Q ss_pred hhhHHHHHHHcCCcEEeechHHHHHHHhcCc---CCCCCCccccEEEeecCCCCcchHHHHHhhCC-----CCceecccc
Q 005501 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC---LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-----YNAIIESCG 505 (693)
Q Consensus 434 ~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~---~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~-----~~~l~n~YG 505 (693)
+..+++.+.++++|++..+|.++..+..... ....+++++|.+++||+++++.+.+.+.+.++ ...+++.||
T Consensus 259 ~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG 338 (579)
T PRK09192 259 PLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYG 338 (579)
T ss_pred HHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccc
Confidence 6789999999999987776665555443221 12356789999999999999999888776653 135899999
Q ss_pred cccccceeccCCcCCC---------------------------CccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE
Q 005501 506 GTELSSAYIQGSLLQP---------------------------QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (693)
Q Consensus 506 ~TE~~~~~~~~~~~~~---------------------------~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v 558 (693)
+||++..++....... ....++|+|+||++++|+|+++++++.|+ +|||++
T Consensus 339 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~--~Gel~i 416 (579)
T PRK09192 339 LAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERV--VGHICV 416 (579)
T ss_pred cccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCC--EEEEEe
Confidence 9999865543321100 11247899999999999999999999998 599998
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
..||++ + ..+.+.|.. +.||+|||+|++ +||+++|+||+||+||++|++|+|.|||++|.
T Consensus 417 ~g~~~~~gY~~------~-~~~~~~~~~------dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~- 481 (579)
T PRK09192 417 RGPSLMSGYFR------D-EESQDVLAA------DGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAE- 481 (579)
T ss_pred cCCchhhhhcC------C-ccccccccC------CceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHH-
Confidence 345655 2 344545543 239999999999 99999999999999999999999999999995
Q ss_pred cCcccc--eeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHH-hhcCCCceec
Q 005501 634 ADESIL--ETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ-SKLNPLFKVW 692 (693)
Q Consensus 634 ~~p~V~--~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~-~~m~P~~~v~ 692 (693)
.||+|. +|+|++++++. + +.++++++..++...+.++|+++++++++ .++.|..+.+
T Consensus 482 ~~p~V~~~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~ 541 (579)
T PRK09192 482 QEPELRSGDAAAFSIAQEN-G-EKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVEL 541 (579)
T ss_pred hcCCccCCcEEEEEeccCC-C-eeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 999998 89999998874 4 68999998877655667899999999986 5778876543
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=4.2e-54 Score=471.85 Aligned_cols=412 Identities=20% Similarity=0.228 Sum_probs=337.1
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecc
Q 005501 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 211 TY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
||+||.++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8999999999999999999 999999999999999999999999999999999999999999999999999999999875
Q ss_pred eeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCC
Q 005501 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (693)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG 369 (693)
... ... ....+.++...... ..........+++++++|||||||
T Consensus 81 ~~~--~~~------------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG 124 (436)
T TIGR01923 81 LEE--KDF------------------------------QADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTG 124 (436)
T ss_pred ccc--cce------------------------------eecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCC
Confidence 310 000 00011111111110 001112345689999999999999
Q ss_pred CcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 005501 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (693)
Q Consensus 370 ~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l 449 (693)
.||+|+++|+++...+.+....++++++|++++..|+.|..++..++.++..|+++++.+.. ..+++.++++++|++
T Consensus 125 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 125 KPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred CCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 99999999999988888888889999999999999999999888889999999999998642 389999999999999
Q ss_pred eechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCC
Q 005501 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (693)
Q Consensus 450 ~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (693)
.++|+++..|.+.... .+++|.+++|||++++++.+++... +..++|.||+||++..++...........++|+
T Consensus 202 ~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 275 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARPDVGR 275 (436)
T ss_pred EeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccccCCCc
Confidence 9999999999876432 2689999999999999998877653 788999999999987555443322222235899
Q ss_pred CCCCceEEE-ECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCC
Q 005501 530 ATMTAGLVI-LDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGG 603 (693)
Q Consensus 530 p~~~~~~~i-ld~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG 603 (693)
|+++++++| .|+.+ + .|||++ ..||++ +++.+...+ +.+||+|||+|++++||
T Consensus 276 ~~~~~~~~i~~~~~~------~--~Gel~v~~~~~~~gy~~------~~~~~~~~~-------~~~~~~TGD~~~~~~dg 334 (436)
T TIGR01923 276 PLAGREIKIKVDNKE------G--HGEIMVKGANLMKGYLY------QGELTPAFE-------QQGWFNTGDIGELDGEG 334 (436)
T ss_pred cCCCcEEEEEeCCCC------C--ceEEEEECCccchhhCC------Chhhhhhhh-------cCCCeeccceEEEcCCC
Confidence 999999999 44332 3 499998 345554 222333222 23499999999999999
Q ss_pred cEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHh
Q 005501 604 YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (693)
Q Consensus 604 ~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~ 683 (693)
++++.||.||+||++|.+|++.|||.+|. .+|.|.+++|++.++...+ ..++++++++++ .+..++.++++++|+.
T Consensus 335 ~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~--~~~~~l~~~l~~~l~~ 410 (436)
T TIGR01923 335 FLYVLGRRDDLIISGGENIYPEEIETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSESD--ISQAKLIAYLTEKLAK 410 (436)
T ss_pred CEEEeccccCeEEeCCEeeCHHHHHHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECCC--CCHHHHHHHHHHhhhC
Confidence 99999999999999999999999999995 8999999999998877666 889999998763 5678999999999999
Q ss_pred hcCCCceec
Q 005501 684 KLNPLFKVW 692 (693)
Q Consensus 684 ~m~P~~~v~ 692 (693)
+++|.+++.
T Consensus 411 ~~~p~~i~~ 419 (436)
T TIGR01923 411 YKVPIAFEK 419 (436)
T ss_pred CCCCeEEEE
Confidence 999998764
No 113
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-53 Score=484.61 Aligned_cols=454 Identities=18% Similarity=0.181 Sum_probs=331.7
Q ss_pred CCCCCCcEEEEEecCCC-CCCcceeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
+..+|+++|+++.+... ..+..+++||+||.++++++|++|.+.-++||+|+|+++|++++++++|||+++|++++|++
T Consensus 11 a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~ 90 (578)
T PRK05850 11 ASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLS 90 (578)
T ss_pred HhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecC
Confidence 36899999999754210 11223589999999999999999998833799999999999999999999999999999999
Q ss_pred C---CCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcC---C-CceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 265 D---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---P-LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 265 p---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
+ ..+.+++.+++++++++++++++.... .+....... . ..++.++. . ++..
T Consensus 91 ~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~ 148 (578)
T PRK05850 91 VPQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQPGQSAPPVIEVDL-------------L---DLDS 148 (578)
T ss_pred CCCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhcccccccceEeecc-------------c---cccc
Confidence 7 457899999999999999999875321 111111100 0 01111110 0 0000
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchh-cC-----CCCCCEEEEeCCccccch
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-ID-----LKVGDVYCWPTNLGWVMG 411 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~ 411 (693)
.. ........++++++|+|||||||.||||+++|+++.+.+...... +. ...+++++++.|+.|+++
T Consensus 149 --~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 221 (578)
T PRK05850 149 --PR-----GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMG 221 (578)
T ss_pred --CC-----ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCch
Confidence 00 001123456899999999999999999999999998766554332 22 356789999999999999
Q ss_pred h-HHHHHHHHcCCEEEEecCC---CChhhHHHHHHHcCCcEEeechHHH-HHHHhcC---cCCCCCCccccEEEeecCCC
Q 005501 412 P-VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLV-KAWRNTN---CLEGLDWTKIRSFASTGETS 483 (693)
Q Consensus 412 ~-~~~~~~L~~G~~lvi~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l-~~l~~~~---~~~~~~l~~lr~v~~gGe~l 483 (693)
+ ..++.+++.|+++++.+.. .++..+++++++++++++ .+|+++ ..+.... .....+++++|.+++||+++
T Consensus 222 ~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~ 300 (578)
T PRK05850 222 LVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERV 300 (578)
T ss_pred hHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCC
Confidence 7 5688999999999998642 267889999999999865 555554 3333211 11234578999999999999
Q ss_pred CcchHHHHHhhCC-----CCceecccccccccceeccCCcCCC------------------------CccCccCCCCCCc
Q 005501 484 NVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------------------------QAFGAFSTATMTA 534 (693)
Q Consensus 484 ~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~p~~~~ 534 (693)
++.+.+++.+.++ +..+++.||+||++..+.......+ ....++|.|. +.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~ 379 (578)
T PRK05850 301 HPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SP 379 (578)
T ss_pred CHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CC
Confidence 9999888877652 3468999999998754333211100 0012345554 57
Q ss_pred eEEEECC-CCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccc---cccC--CCceeeeecceEEEecCC
Q 005501 535 GLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRG---MPMY--KGMCLRRHGDIIKRTVGG 603 (693)
Q Consensus 535 ~~~ild~-~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~---~p~~--~g~~~yrTGDl~~~~~dG 603 (693)
+++|+|+ +++++|.|+ .|||++ +.||++ +++.|++.|.. +|.. .+.+||+|||+|+++ ||
T Consensus 380 ~~~ivd~~~~~~~~~g~--~Gel~v~g~~~~~gY~~------~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G 450 (578)
T PRK05850 380 TVRIVDPDTCIECPAGT--VGEIWVHGDNVAAGYWQ------KPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EG 450 (578)
T ss_pred EEEEEcCCCCcCCCCCC--EEEEEEecCcccccccC------ChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CC
Confidence 8999995 578999998 499999 457776 56678888853 2211 123599999999997 99
Q ss_pred cEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCCh------HHHHHHH
Q 005501 604 YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP------DKLKMIF 677 (693)
Q Consensus 604 ~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~------~~l~~~l 677 (693)
+|+|+||+||+||++|++|+|.|||++|. +||++ +++|++++++ .+ +.++|+|+++++...+. ..+++++
T Consensus 451 ~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~v~~v~~~-~~-~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v 526 (578)
T PRK05850 451 ELFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVAAISVPDD-GT-EKLVAIIELKKRGDSDEEAMDRLRTVKREV 526 (578)
T ss_pred EEEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEEEEEecCC-Cc-eEEEEEEEeccccCcchhhhhhHHHHHHHH
Confidence 99999999999999999999999999996 89985 5888888876 55 89999999887643332 3566666
Q ss_pred HHHHHh
Q 005501 678 SKAIQS 683 (693)
Q Consensus 678 ~~~L~~ 683 (693)
...|+.
T Consensus 527 ~~~l~~ 532 (578)
T PRK05850 527 TSAISK 532 (578)
T ss_pred HHHHHH
Confidence 665654
No 114
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-53 Score=455.97 Aligned_cols=446 Identities=18% Similarity=0.161 Sum_probs=349.5
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++.+|+.+++-......-.+++..+||+|..+++.+++..|+.. +++++.|||+.-|++||+++.+||...|++.|||.
T Consensus 85 ~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplY 164 (691)
T KOG1256|consen 85 VEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLY 164 (691)
T ss_pred hhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecc
Confidence 47899999997665321246788999999999999999999998 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhc-----CCCc--eEEEcCCCCC---CCCCCCCCcccHHH
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-----APLK--AIVLPAIGND---VGIPLREQDLSWKD 334 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~ 334 (693)
...+++.+.++++++...+++++++. .+..+++. .+.. ++.+...... ..........+|++
T Consensus 165 dTlg~ea~~~Ii~~~e~~iv~vd~~~--------k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e 236 (691)
T KOG1256|consen 165 DTLGAEAVHYIINHAEISIVFVDNAK--------KAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDE 236 (691)
T ss_pred cCCCHHHHHHHHHhcceeEEEEeCHH--------HHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHH
Confidence 99999999999999999999999641 22233331 3322 2223222211 11112234678999
Q ss_pred HhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHh---ch---hcCCCCCCEEEEeCCccc
Q 005501 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WA---HIDLKVGDVYCWPTNLGW 408 (693)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~---~~---~~~~~~~d~~l~~~~~~~ 408 (693)
+...+... ..... .+..|+|.|.|+|||||||.|||||+||+|++..+... .. .......|++++++|++|
T Consensus 237 ~~~lG~~~--~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAH 313 (691)
T KOG1256|consen 237 FEELGKKN--QRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAH 313 (691)
T ss_pred HHhhcccc--cCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHH
Confidence 99887641 11122 46688999999999999999999999999998755421 11 112334699999999999
Q ss_pred cchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcC-------------------------
Q 005501 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN------------------------- 463 (693)
Q Consensus 409 ~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~------------------------- 463 (693)
++.-..-...+..|+++.++.+ |+..+.+.|++.++|.+..+|.+|+.+.+..
T Consensus 314 i~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~ 391 (691)
T KOG1256|consen 314 IFERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEH 391 (691)
T ss_pred HHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 9998555556689999999874 5577888899999999999999988774320
Q ss_pred -cCCCCCC-------------------ccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCc
Q 005501 464 -CLEGLDW-------------------TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (693)
Q Consensus 464 -~~~~~~l-------------------~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (693)
....... ..+|.+++|++|+++++...++..+ +++++++||+|||++..+...+... .
T Consensus 392 ~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~~~d~-~ 469 (691)
T KOG1256|consen 392 RLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTLPGDN-V 469 (691)
T ss_pred HhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEeccCCCC-C
Confidence 0000000 3688899999999999999888765 6999999999999965555555444 7
Q ss_pred cCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceE
Q 005501 524 FGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDII 597 (693)
Q Consensus 524 ~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~ 597 (693)
.+++|.|+|+++++++| ++.+.-+.|.. ||||| ..||+. +++.|++.|..+. |++|||+|
T Consensus 470 lgsvG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~GYyK------~p~~T~e~ideDG------WLhTGDiG 535 (691)
T KOG1256|consen 470 LGSVGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMGYYK------DPEKTAEAIDEDG------WLHTGDIG 535 (691)
T ss_pred CCCcCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhceeccC------ChHHHhhhhcccc------ccccccce
Confidence 89999999999999998 44444555553 99998 567776 6779999997544 99999999
Q ss_pred EEecCCcEEEEeecCCcccc-CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCC
Q 005501 598 KRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG 665 (693)
Q Consensus 598 ~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~ 665 (693)
+|+++|.|.++||+++.+|. .|+.|.|..||++.. ..+-|.+.+|.+... +..|+|.|++++.
T Consensus 536 ~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~~V~qi~V~g~s~----~~~LvaiVvpd~e 599 (691)
T KOG1256|consen 536 EWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSLPVQQIFVLGDSL----RSFLVAIVVPDPE 599 (691)
T ss_pred eECCCccEEEEecccceEEcCCCCccChHHHHHHHh-cCCceEEEEEECCcc----hhcEEEEEecChh
Confidence 99999999999999999995 599999999999995 778899999887432 2789999999764
No 115
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=6.3e-54 Score=467.66 Aligned_cols=390 Identities=25% Similarity=0.290 Sum_probs=302.5
Q ss_pred cCCCCCCcEEEEE-ecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 185 HRRKEDNTVAIVW-REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 185 ~a~~~pd~~Al~~-~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
+|+++||++|+++ ... ++||+||.++++++|..|+++ +++|++|+|+++|++++++++|||+++|++++|
T Consensus 4 ~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 4 QAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred HHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccc
Confidence 5688999999999 444 999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHh---hcC--CCceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAA--PLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
++|.++.+++.++++.+++++||+ .+.. +... ...+. ... ...++.++..... ....+..
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 140 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT-SEAV---DSEP-LKKLKSIFKQEDPSSSIIILDRDDLP----------KKEALKS 140 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE-CHHH---SCHH-HHHHHHHHTTSTTTEEEEEESHSSCT----------TCHHHHH
T ss_pred cccccccccccccccccceeEEEE-eccc---cccc-cccchhhhcccccccccccccccccc----------ccccccc
Confidence 999999999999999999999997 1000 0011 11121 111 1123333221110 0011110
Q ss_pred ccCCCCCCCCCCCcc-CCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc--hhcCCCCCCEEEEeCCccccchh-H
Q 005501 338 SVDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGP-V 413 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~ 413 (693)
.... ...... ..++++++++|||||||.||+|.++|+++.+.+.... ..++++ |++++++|++|.+++ .
T Consensus 141 ~~~~-----~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 141 ASLS-----DEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHC-----HCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHH
T ss_pred cccc-----cccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccc
Confidence 0000 000000 0569999999999999999999999999988877653 223333 699999999999999 8
Q ss_pred HHHHHHHcCCEEEEecCCCC--hhhHHHHHHHcCCcEEeechHHHHHHHhcCcC----CCCCCccccEEEeecCCCCcch
Q 005501 414 ILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNVDD 487 (693)
Q Consensus 414 ~~~~~L~~G~~lvi~~~~~~--~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~----~~~~l~~lr~v~~gGe~l~~~~ 487 (693)
.++.++..|+++++++.... +..+++.++++++|++.++|+++..|++.... ...++++||.+++||+++++++
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 293 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDL 293 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHH
T ss_pred cccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhh
Confidence 89999999999999985432 46789999999999999999999999874222 2346889999999999999999
Q ss_pred HHHHHhhCCCCceecccccccccceeccCC-cCCCCccCccCCCCCCceEEEECCC-CCCCCCCCCceeeEEE-----ec
Q 005501 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-----FP 560 (693)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~ild~~-~~~~p~G~~giGel~v-----~~ 560 (693)
.+++.+.++..++++.||+||++..++... .......+++|+|++|++++|+|++ +++++.|+. |||++ ..
T Consensus 294 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~--Gei~i~~~~~~~ 371 (417)
T PF00501_consen 294 LRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEP--GEIVIRGPNVFS 371 (417)
T ss_dssp HHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSE--EEEEEESTTSBS
T ss_pred ccccccccccccceecccccccceeeeccccccccccccccccccccccccccccccccccccccc--ccccccCCccce
Confidence 999998876568999999999998765442 2222355789999999999999987 999999994 99999 35
Q ss_pred ccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccC
Q 005501 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (693)
Q Consensus 561 gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (693)
||++ +++.+++.|.. ++||+|||+|++|+||+|+++||.||+||+|
T Consensus 372 gy~~------~~~~~~~~~~~------~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 372 GYYN------DPELTAEAFID------DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EETT------BHHHHHHHEET------TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eeec------ccccccccccc------ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 6665 44577777763 2399999999999999999999999999986
No 116
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.9e-52 Score=467.82 Aligned_cols=450 Identities=18% Similarity=0.148 Sum_probs=339.9
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
|...|+.+|+...+.. +.+||.||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~~~~~~~~~------~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~ 85 (545)
T PRK07768 12 ARTSPRGMVTGEPDAP------VRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLH 85 (545)
T ss_pred hhCCCcceEEecCCCc------eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccC
Confidence 3578999999765542 4899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHH-------HHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhc
Q 005501 265 DSFAAREI-------ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (693)
Q Consensus 265 p~~~~~~l-------~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (693)
+..+.+++ ..+++.++++++++++...... ..+ .... ...+.++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~-~~~~------------------~~~~~~~~l~~ 140 (545)
T PRK07768 86 QPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAA------PVL-EEKG------------------IRVLTVADLLA 140 (545)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhh------hhh-cccC------------------Cceeehhhhcc
Confidence 98887655 4467778999999976432100 000 0000 11233444443
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCC-CEEEEeCCccccchhH-HH
Q 005501 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPV-IL 415 (693)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~-~~ 415 (693)
.... ......++++++|+|||||||+||||+++|+++.+.+......+++.++ |++++.+|++|++++. .+
T Consensus 141 ~~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 213 (545)
T PRK07768 141 ADPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFL 213 (545)
T ss_pred cCCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHH
Confidence 2111 1223457999999999999999999999999998888877777888876 8999999999999985 46
Q ss_pred HHHHHcCCEEEEecCC---CChhhHHHHHHHcCCcEEeechHHHHHHHhcC----cCCCCCCccccEEEeecCCCCcchH
Q 005501 416 FSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDD 488 (693)
Q Consensus 416 ~~~L~~G~~lvi~~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~----~~~~~~l~~lr~v~~gGe~l~~~~~ 488 (693)
+.++..|+++++.+.. .++..++++++++++|++..+|.++..+.... .....+++++|.+++||+++++...
T Consensus 214 ~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~ 293 (545)
T PRK07768 214 TVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADV 293 (545)
T ss_pred HHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHH
Confidence 6789999999888642 25678889999999999988888777665421 1124567899999999999999998
Q ss_pred HHHHhh---C--CCCceecccccccccceeccCCcCC-------------------------CCccCccCCCCCCceEEE
Q 005501 489 LWLSSK---A--WYNAIIESCGGTELSSAYIQGSLLQ-------------------------PQAFGAFSTATMTAGLVI 538 (693)
Q Consensus 489 ~~~~~~---~--~~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~~~~~~i 538 (693)
+++.+. + +...+++.||+||++..++...... ....+++|+|+++++++|
T Consensus 294 ~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i 373 (545)
T PRK07768 294 EDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRV 373 (545)
T ss_pred HHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEE
Confidence 887653 2 2235999999999986543322110 112357999999999999
Q ss_pred ECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCC
Q 005501 539 LDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 613 (693)
Q Consensus 539 ld~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd 613 (693)
+|+++++++.|+ +|||++ .+||++. ..+.. ... +..||+|||+|++++||+++|+||+||
T Consensus 374 ~~~~~~~~~~g~--~Gel~v~~~~~~~gy~~~-------~~~~~----~~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d 438 (545)
T PRK07768 374 VDEDGQVLPPRG--VGVIELRGESVTPGYLTM-------DGFIP----AQD--ADGWLDTGDLGYLTEEGEVVVCGRVKD 438 (545)
T ss_pred ECCCCCCCCCCC--EEEEEEccCcccccccCC-------CCCcc----ccc--CCCeeeccceEEEecCCEEEEEccccc
Confidence 999999999998 499998 3455542 11111 111 234999999999999999999999999
Q ss_pred ccccCCeeeehHHHHHHHhccCcccceeEEEeecC--CCCCceEEEEEEEecCCCC-CChHHHHHHHHHHHHhh--cCCC
Q 005501 614 TMNLGGIKTSSVEIERVCDQADESILETAAISVSP--AGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSK--LNPL 688 (693)
Q Consensus 614 ~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~--~~~g~~~l~a~vv~~~~~~-~~~~~l~~~l~~~L~~~--m~P~ 688 (693)
+||++|++|++.|||++|. .||+|.+++|+++.. ...+ +.+++++...++.. ....++.+++++.++++ ..|.
T Consensus 439 ~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~ 516 (545)
T PRK07768 439 VIIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLDAGHSR-EGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPR 516 (545)
T ss_pred eEEECCEecCHHHHHHHHH-hCcccccceEEEEEecCCCCc-eEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999995 899999988877653 3333 45555555443211 12245778888888776 4565
Q ss_pred ce
Q 005501 689 FK 690 (693)
Q Consensus 689 ~~ 690 (693)
.+
T Consensus 517 ~v 518 (545)
T PRK07768 517 NV 518 (545)
T ss_pred EE
Confidence 44
No 117
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.9e-52 Score=453.13 Aligned_cols=393 Identities=21% Similarity=0.206 Sum_probs=325.9
Q ss_pred cHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeec
Q 005501 211 TYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (693)
Q Consensus 211 TY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (693)
||.||.+.++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999999 7 99999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCC
Q 005501 289 FILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (693)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGST 368 (693)
........ .......+.. .+......... .........++++++++||||||
T Consensus 81 ~~~~~~~~----------~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTt 132 (408)
T TIGR01733 81 ALASRLAG----------LVLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGST 132 (408)
T ss_pred chhhhccc----------cCCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCC
Confidence 54321111 1111111110 00011110000 00011113568999999999999
Q ss_pred CCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCC--hhhHHHHHHHcCC
Q 005501 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGV 446 (693)
Q Consensus 369 G~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~--~~~~~~~i~~~~v 446 (693)
|.||+|.++|+++.+........+.+.++|+++...|++|+++++.++.++..|+++++++.... +..+.+.++++++
T Consensus 133 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (408)
T TIGR01733 133 GRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPV 212 (408)
T ss_pred CCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCc
Confidence 99999999999999988888888899999999999999999999999999999999999876443 6789999999999
Q ss_pred cEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCc--CCCC--
Q 005501 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQPQ-- 522 (693)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~~~-- 522 (693)
|.+.++|++++.|.+... ..+++||.+++||+++++++.+++.+.++++.+++.||+||++..+..... ....
T Consensus 213 t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~ 289 (408)
T TIGR01733 213 TVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRE 289 (408)
T ss_pred eEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCc
Confidence 999999999999988753 457899999999999999999999988876899999999999876542221 1111
Q ss_pred ccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCC--Cceeeeecc
Q 005501 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYK--GMCLRRHGD 595 (693)
Q Consensus 523 ~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~--g~~~yrTGD 595 (693)
...++|+|+++++++|+|+++++++.|+. |||++ ..||++ +++.|...|..+++.. |.+||+|||
T Consensus 290 ~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~~~~~~~~~~~~~~~~~~~~TGD 361 (408)
T TIGR01733 290 SPVPIGRPLANTRLYVLDDDLRPVPVGVV--GELYIGGPGVARGYLN------RPELTAERFVPDPFAGGDGARLYRTGD 361 (408)
T ss_pred cccccCcccCCceEEEECCCCCCCCCCCc--eEEEecCccccccccC------ChhhhhcceeeCCCCCCCCceEEECCc
Confidence 26789999999999999999999999985 99998 456766 5567777887776643 445999999
Q ss_pred eEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEE
Q 005501 596 IIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (693)
Q Consensus 596 l~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~V 643 (693)
+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+|+|
T Consensus 362 l~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 362 LVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred eEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHh-cCcchhhhcC
Confidence 9999999999999999999999999999999999996 9999999875
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-51 Score=418.32 Aligned_cols=474 Identities=21% Similarity=0.196 Sum_probs=371.3
Q ss_pred ccCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 184 NHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 184 ~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
.||+++|+++|+++.+.. +++||+|++++++++|+.|..+ ++.||.|+++|+|+++++...|+.+|+|++...
T Consensus 85 ~~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~ 158 (649)
T KOG1179|consen 85 SQVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAF 158 (649)
T ss_pred HHHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeee
Confidence 366899999999998852 3999999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCC-CceEEEcCCCCCCCCCCCCCcccHHHHhcccCC
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
||++...+.|.+.++-++++.+|++.++.. .+.++.+... ..+.++..... ..+.+..++...++....
T Consensus 159 iNtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~~~i~~~~~~~~----~~~~g~~~L~~~l~~~~~ 228 (649)
T KOG1179|consen 159 INTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIKNGIHVFSLGPT----SVPDGIESLLAKLSAAPK 228 (649)
T ss_pred eccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhhccceEEecCCC----CCCchHHHHHHhhccccc
Confidence 999999999999999999999999986431 1111111111 11222221111 011222233333332222
Q ss_pred CCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHHH
Q 005501 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (693)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (693)
.+.+ ..........++++.||||||||.||..+++|.-+..........++++++|+++..+|+.|.++. ..+..+|.
T Consensus 229 ~~vp-~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~ 307 (649)
T KOG1179|consen 229 HPVP-VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLL 307 (649)
T ss_pred CCCC-cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHh
Confidence 1111 022334566789999999999999999999999887776656678999999999999999999876 77999999
Q ss_pred cCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCce
Q 005501 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (693)
Q Consensus 421 ~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 500 (693)
.|+|+|+-. .++...||+.+.+++||++.-.--+.+.|++.+......-..+|..+-- -+.++.++.|.++|...+|
T Consensus 308 ~GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GN--GLR~diW~~Fv~RFg~~~I 384 (649)
T KOG1179|consen 308 HGATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGN--GLRPDIWQQFVKRFGIIKI 384 (649)
T ss_pred cCceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecC--CCCchHHHHHHHHcCCCeE
Confidence 999999976 6788999999999999999999999999999877655555778877644 4789999999999977789
Q ss_pred ecccccccccceeccCCcCCCCccCccCC------CCCCceEEE---------ECCCCC--CCCCCCCceeeEEE-----
Q 005501 501 IESCGGTELSSAYIQGSLLQPQAFGAFST------ATMTAGLVI---------LDECGV--PYPDDQPCVGEVGL----- 558 (693)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~------p~~~~~~~i---------ld~~~~--~~p~G~~giGel~v----- 558 (693)
.+.||+||..+..+.. ....+.+|+ -+--+++-= .|++|- +|++|++ |.+.-
T Consensus 385 gE~YgaTEgn~~~~N~----d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv~~i~~k 458 (649)
T KOG1179|consen 385 GEFYGATEGNSNLVNY----DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLVGKIVQK 458 (649)
T ss_pred EEEeccccCcceeeee----cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEEEEeccC
Confidence 9999999988644322 122233332 111122222 333332 5788997 54331
Q ss_pred -----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhc
Q 005501 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (693)
Q Consensus 559 -----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~ 633 (693)
..||.+ +.+.|+.+...|-|..|+-||.|||+-.+|+.|+|||.+|..|.+.-.|++|+..|||.+| +
T Consensus 459 ~P~~~F~GY~g------~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l-~ 531 (649)
T KOG1179|consen 459 NPLRSFLGYAG------PKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVL-S 531 (649)
T ss_pred CchhhhccccC------chhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHH-h
Confidence 236665 3668888888888999999999999999999999999999999999999999999999999 5
Q ss_pred cCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCce
Q 005501 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFK 690 (693)
Q Consensus 634 ~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P~~~ 690 (693)
...+++|+.|.|+.-+...+..=.|-|+.+++.+.+.+.+-+++++.||+|-.|.++
T Consensus 532 ~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~Fl 588 (649)
T KOG1179|consen 532 ALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFL 588 (649)
T ss_pred hhccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHH
Confidence 999999999999877654336667777888888899999999999999999999875
No 119
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-50 Score=410.27 Aligned_cols=434 Identities=18% Similarity=0.179 Sum_probs=333.9
Q ss_pred cceeecHHHHHHHHHHHHHHHHhh-cCCCCE-EEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeE
Q 005501 206 AVNLMTYKELREQVMLVANALDTM-FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283 (693)
Q Consensus 206 ~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~-V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~ 283 (693)
++..+||.|+.+++.++|+.|.+. +++++. |+|+++.+.+|.++.+||++.+...|.+...+..+.|.+-|++++++.
T Consensus 86 ~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~ 165 (678)
T KOG1180|consen 86 DYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTA 165 (678)
T ss_pred ceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceE
Confidence 567999999999999999999999 986666 999999999999999999999999999999999999999999999999
Q ss_pred EEeecceeeCCccccchhhHhhcCCCc--eEEEcCCCCC---CCCC----CCCCcccHHHHhcccCCCCCCCCCCCccCC
Q 005501 284 IFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGND---VGIP----LREQDLSWKDFLSSVDYHPRPNYYSPVYNP 354 (693)
Q Consensus 284 il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (693)
|||+.... +.+....+..+.. ++.++..+.. .+.. .+...++++++...+.... .++.+..
T Consensus 166 i~T~~~LL------~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P~ 235 (678)
T KOG1180|consen 166 IFTDSELL------PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPPK 235 (678)
T ss_pred EEeCHHHH------HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCCC
Confidence 99998643 3333333333332 3333321111 1111 1234577888888776521 2333447
Q ss_pred CCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc-CCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCC-
Q 005501 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP- 432 (693)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~- 432 (693)
|+|+|+|||||||||.|||||++|+|+++.+....... .+.+.|+++.++|++|.+-+..=+.++..|+++=-.+..+
T Consensus 236 p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TL 315 (678)
T KOG1180|consen 236 PSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTL 315 (678)
T ss_pred CCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCccee
Confidence 79999999999999999999999999998887776654 6899999999999999999855558899998875544322
Q ss_pred -Ch-----hhHHHHHHHcCCcEEeechHHHHHHHhcCc-------------------------C-CCC------------
Q 005501 433 -LE-----RSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-------------------------L-EGL------------ 468 (693)
Q Consensus 433 -~~-----~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~-------------------------~-~~~------------ 468 (693)
|. ..---.+...++|++.++|..+..+.+... . ...
T Consensus 316 tdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkK 395 (678)
T KOG1180|consen 316 TDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKK 395 (678)
T ss_pred cccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHH
Confidence 11 111224567799999999998876633200 0 000
Q ss_pred ----CCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCCCCCceEEEEC-CCC
Q 005501 469 ----DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECG 543 (693)
Q Consensus 469 ----~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~ 543 (693)
--.+||.+++||++|+++..+.+.-.+ .+++.++||.||+++..+...+.+ ...+.+|.|++-++++++| ++|
T Consensus 396 Ir~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~d-~~~g~vG~pl~c~eiKLvdw~Eg 473 (678)
T KOG1180|consen 396 IRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPED-FSTGRVGAPLPCCEIKLVDWEEG 473 (678)
T ss_pred HHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChhh-cccccccCCccceEEEEEEhhhc
Confidence 013799999999999999877765443 569999999999987655544433 4456899999999999999 333
Q ss_pred CCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEeecCCccc-c
Q 005501 544 VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-L 617 (693)
Q Consensus 544 ~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik-~ 617 (693)
.-.+.+.|--|||+| .+||++ |++.|++.|.. .+|.|||+|||+|+|.+||.|.+++|++|.|| .
T Consensus 474 GY~~~~~PPrGEI~i~G~~vt~gY~k------n~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq 544 (678)
T KOG1180|consen 474 GYFAKNKPPRGEILIGGPNVTMGYYK------NEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQ 544 (678)
T ss_pred CccCCCCCCCceEEecCCccChhhhC------Chhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhhc
Confidence 322222211378887 678887 77799999986 46899999999999999999999999999999 5
Q ss_pred CCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCC
Q 005501 618 GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG 665 (693)
Q Consensus 618 ~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~ 665 (693)
+|+.|+++-||+++ +..|-|...+|.+-. .. ..+||+||++++
T Consensus 545 ~GEYIsL~KvEa~l-~s~p~V~NICvyAd~--~~--s~~VaiVVPn~~ 587 (678)
T KOG1180|consen 545 NGEYISLGKVEAAL-RSSPYVDNICVYADS--NK--SKPVAIVVPNQK 587 (678)
T ss_pred ccceeehHHHHHHH-hcCcchhheEEeccc--cc--ceeEEEEcCCch
Confidence 79999999999999 499999999998743 22 689999999864
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.8e-41 Score=401.74 Aligned_cols=414 Identities=11% Similarity=0.041 Sum_probs=297.7
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~ 264 (693)
++++|+++|+.+... .+.++.+||+|+.++++++|++|+++ +++||+|+|+++|+++|+++.+||+++|++.||++
T Consensus 437 a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly 513 (1452)
T PTZ00297 437 VTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLV 513 (1452)
T ss_pred HHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCC
Confidence 478899999964311 12345899999999999999999999 99999999999999999999999999999999997
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCC--CCC--CCCCcccHHHHhcccC
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV--GIP--LREQDLSWKDFLSSVD 340 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~ 340 (693)
+ +.+++.+++++++++++|++.... +.+..+....-..+++++...... ... ......+|+++...+.
T Consensus 514 ~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~ 585 (1452)
T PTZ00297 514 G--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGR 585 (1452)
T ss_pred C--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCc
Confidence 5 467999999999999999986432 111111111122344443211000 000 0112456888887653
Q ss_pred CCCCCCCCCCccCCCCCeEEEEe---ccCCCCCcceEEecchhHHHHHHHhchhc---CCCCCCEEEEeCCccccchhHH
Q 005501 341 YHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVI 414 (693)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~---TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~ 414 (693)
... . .......++|++.|+| ||||||.||||++||+|++..+....... ...++|+++.++|++|.++...
T Consensus 586 ~~~--~-~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~ 662 (1452)
T PTZ00297 586 LCP--V-PLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVF 662 (1452)
T ss_pred ccC--c-cccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHH
Confidence 211 1 1122346789999996 99999999999999999988887654322 4567899999999999998766
Q ss_pred HHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCc----C----------------------CCC
Q 005501 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----L----------------------EGL 468 (693)
Q Consensus 415 ~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~----~----------------------~~~ 468 (693)
.+.++..|+++.. .+++.+++.|+++++|++.++|.++..+..... . ...
T Consensus 663 ~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~ 738 (1452)
T PTZ00297 663 VLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRR 738 (1452)
T ss_pred HHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6788999999864 356899999999999999999999987643210 0 000
Q ss_pred CC----------------ccccEEEeecC--CCCcchHHHHHhhCCCCceecccccccccceeccCCcCCCCccCccCCC
Q 005501 469 DW----------------TKIRSFASTGE--TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA 530 (693)
Q Consensus 469 ~l----------------~~lr~v~~gGe--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p 530 (693)
.. ..+|.+++||. +++. .... +.+++.+||.||+.. ...+.. . ...|+|
T Consensus 739 ~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~-----~l~~--~i~i~~g~glTE~~~---~~~~~~-~--~~~G~P 805 (1452)
T PTZ00297 739 DSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSF-----SLLE--HISVCYVPCLREVFF---LPSEGV-F--CVDGTP 805 (1452)
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEECCCccccCh-----HHhC--CceEEEecceEEeee---ecCCCC-c--ccCCee
Confidence 00 36888988873 3332 2222 467888999999532 222221 1 234999
Q ss_pred CCCceEEEECCCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccccCCCceeeeecceEEEecCCcEEEEee
Q 005501 531 TMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGR 610 (693)
Q Consensus 531 ~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR 610 (693)
+||++++|.|....--..+ .|||++. |.+ +++.|++.+ +.|++||+|.++||
T Consensus 806 lpgvEvKI~~~~E~~~~~~---~GEIlvr--~~k------dpe~T~e~~-----------------~gW~~dG~L~IidR 857 (1452)
T PTZ00297 806 APSLQVDLEPFDEPSDGAG---IGQLVLA--KKG------EPRRTLPIA-----------------AQWKRDRTLRLLGP 857 (1452)
T ss_pred cCceEEEEcccccccCCCC---CCeEEEE--ECC------ChHHHHHhh-----------------CcCccCCeEEEEec
Confidence 9999999987421101112 4999983 434 455665421 23557999999999
Q ss_pred cCCccc-cCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 611 ADDTMN-LGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 611 ~dd~ik-~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+||.|| .+|++|+|..||+.+ +++|.|.+++|+|... +.++|.|+++.
T Consensus 858 kKdlikls~GEyVaP~~IE~~l-~~sp~I~qi~V~Gd~~-----k~lvALVvpd~ 906 (1452)
T PTZ00297 858 PLGILLPVAYEYVIAAELERIF-SQSRYVNDIFLYADPS-----RPIIAIVSPNR 906 (1452)
T ss_pred cccceECCCCcEEcHHHHHHHH-hcCCCccEEEEEecCC-----CceEEEEEeCH
Confidence 999999 579999999999999 4999999999998432 45999998863
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-41 Score=362.00 Aligned_cols=294 Identities=17% Similarity=0.149 Sum_probs=243.1
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEe--cC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY--QG 430 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~--~~ 430 (693)
..+++++||+|||||||.||||+++|+++.+........+ ...++++...|+.|..++..++.+++.|++++++ ..
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3468999999999999999999999999988776654443 3567888999999999998888999999999884 34
Q ss_pred CCChhhHHHHHHHcC--CcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccccccc
Q 005501 431 SPLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~--vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (693)
..++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++||+++++++.+++.+. +++++|.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCc
Confidence 557889999999998 5667778988887766432 23457899999999999999998887753 689999999999
Q ss_pred ccceeccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccc
Q 005501 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMP 583 (693)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p 583 (693)
++..+ ...|+|++|++++|.| ||+++ ..||.+.+. . ..|..
T Consensus 187 ~~~~~-----------~~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY~~~~~------~--~~~~~-- 232 (358)
T PRK07824 187 TSGGC-----------VYDGVPLDGVRVRVED-------------GRIALGGPTLAKGYRNPVD------P--DPFAE-- 232 (358)
T ss_pred cCCCc-----------CcCceeCCCCEEEecC-------------CEEEEecCccccccCCCcc------c--ccccC--
Confidence 87532 1358999999999843 45554 567766322 1 12221
Q ss_pred cCCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEec
Q 005501 584 MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (693)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~ 663 (693)
+| ||+|||+|++ +||++++.||.||+||++|++|+|.|||++|. +||+|.+|+|++.+++..| +.++++++.+
T Consensus 233 --~g--~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~ 305 (358)
T PRK07824 233 --PG--WFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGD 305 (358)
T ss_pred --CC--ceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeC
Confidence 22 9999999999 89999999999999999999999999999996 9999999999999988877 8999999988
Q ss_pred CCCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 664 KGFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 664 ~~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
.+...+.++++++++++|+.|++|..++.
T Consensus 306 ~~~~~~~~~i~~~~~~~l~~~~~P~~i~~ 334 (358)
T PRK07824 306 GGPAPTLEALRAHVARTLDRTAAPRELHV 334 (358)
T ss_pred CCCCcCHHHHHHHHHhhCccccCCCEEEE
Confidence 76667889999999999999999988764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=3e-38 Score=335.37 Aligned_cols=274 Identities=12% Similarity=0.082 Sum_probs=216.3
Q ss_pred CCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCC--CCEEEEeCCccccchh-HHHHHHHHcCCEEEEecCCC
Q 005501 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSP 432 (693)
Q Consensus 356 ~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~ 432 (693)
++.++++|||||||.||||+++|+++.+.+.+....++++. .|++++.+|++|..+. +.++.++..|+++++.+ ..
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 55799999999999999999999999888877767677644 4689999999998876 67788999999999876 35
Q ss_pred ChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceecccccccccce
Q 005501 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 512 (693)
Q Consensus 433 ~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (693)
++..+++.++. .|++.++|++++.|.+.. .+++++|. ++||+++++++.+.+.+. ....+++.||+||++++
T Consensus 174 ~~~~~l~~i~~--~t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARP--GDLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhcc--CCEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 66777777764 389999999999997652 34677886 678999999999888765 22469999999999864
Q ss_pred eccCCcCCCCccCccCCCCCCceEEEECCCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccccCCCceeee
Q 005501 513 YIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRR 592 (693)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~~~ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yr 592 (693)
.+... ....|+|+|++++.+ | ++ . + .| + ..|++
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~------~----~----~g---------------------~----~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TL------S----S----AG---------------------L----ARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Cc------c----C----CC---------------------c----cceee
Confidence 33221 123466777665433 1 11 0 0 00 0 11689
Q ss_pred ecceEEEecCCcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCC--h
Q 005501 593 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ--P 670 (693)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~--~ 670 (693)
|||+++|++||+|+|+||+||+||++|++|+|.|||++|. +||+|.+|+|+. .+ ++++|+|+++++...+ .
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~~~~~~~~~ 351 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAEDADEAELE 351 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECCCCChHHHH
Confidence 9999999999999999999999999999999999999995 999999999853 34 7899999998654332 4
Q ss_pred HHHHHHHHHHHHhhcCCCceec
Q 005501 671 DKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 671 ~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
++++++++++|+.|+.|..+.+
T Consensus 352 ~~l~~~~~~~L~~~~~P~~i~~ 373 (386)
T TIGR02372 352 IELRATAARHLPAPARPDRFRF 373 (386)
T ss_pred HHHHHHHHHhCCCCCCCcEEEE
Confidence 5899999999999999998765
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=2.7e-33 Score=304.85 Aligned_cols=303 Identities=18% Similarity=0.159 Sum_probs=221.2
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchh-HHHHHHHHcCCEEEEec
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lvi~~ 429 (693)
+.+++++++|||||||.||+|.++|+++...... ....++++++|+++...++++..+. ...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4578899999999999999999999987654322 2344688999999887666654433 34566788899988776
Q ss_pred CCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCC--CCccccEEEeecCCCCcchHHHHHhhCCCCceecccccc
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (693)
. .+++.+++.|+++++|++.++|+++..|++....... ...+||.+++|||+++++..+.+.+.+ +++++|.||+|
T Consensus 153 ~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 153 G-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred C-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 3 3468899999999999999999999988764322222 235899999999999999988888776 58999999999
Q ss_pred cccc-eeccCCcCCCCccCccCCCC--CCceEEEEC-CCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccc
Q 005501 508 ELSS-AYIQGSLLQPQAFGAFSTAT--MTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (693)
Q Consensus 508 E~~~-~~~~~~~~~~~~~~~iG~p~--~~~~~~ild-~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p 583 (693)
|+++ .+...... ...|.++ ++..+.|+| ++|+++|+|+. |||++.. +++..| |
T Consensus 231 E~~~~~~~~~~~~-----~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt~-------------~~~~~~---p 287 (422)
T TIGR02155 231 EVIGPGVAMECVE-----TQDGLHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFTT-------------LTKEAL---P 287 (422)
T ss_pred hhcCCceeecccc-----cCCCceEecCeeEEEEECCCCCCCCCCCCe--eEEEEec-------------CCcccc---c
Confidence 9853 12111110 1123343 356778999 57999999995 9999852 122233 1
Q ss_pred cCCCceeeeecceEEEecC-C-----cEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 584 MYKGMCLRRHGDIIKRTVG-G-----YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~d-G-----~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
. .||+|||+++++++ | .+++.||.||+||++|.+|+|.|||++|. .||+|...+++.+...... +.++
T Consensus 288 ~----~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~~ 361 (422)
T TIGR02155 288 V----IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DELT 361 (422)
T ss_pred e----eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEEE
Confidence 1 28999999999876 4 47899999999999999999999999995 9999985665655554444 6788
Q ss_pred EEEEecCCCC-----CChHHHHHHHHHHHHhhcCC
Q 005501 658 IFVVLKKGFT-----SQPDKLKMIFSKAIQSKLNP 687 (693)
Q Consensus 658 a~vv~~~~~~-----~~~~~l~~~l~~~L~~~m~P 687 (693)
+.|+..++.. .+.+.+.+.|++.+.+.+.+
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 396 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGV 396 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCc
Confidence 8888765421 11233455555555555444
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-34 Score=323.11 Aligned_cols=473 Identities=16% Similarity=0.111 Sum_probs=317.7
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p 265 (693)
...|+..+..+-....+.+...++||++....++.+++.|... ...|+.|++++..+.++++..++++++|..++|+||
T Consensus 47 ~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp 126 (1032)
T KOG1178|consen 47 AEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDP 126 (1032)
T ss_pred hhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecC
Confidence 3455555555443323345566999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCC----HHHHHHHH---HhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcc
Q 005501 266 SFA----AREIATRL---RVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (693)
Q Consensus 266 ~~~----~~~l~~~l---~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (693)
.+| ++++..+. ......++ ..+............+. ........+..+...
T Consensus 127 ~~~~~e~~~~~~~ia~~~~s~~~~i~----------~~l~i~~~~~~~~~~~~------------sv~~~~~~f~~~~~~ 184 (1032)
T KOG1178|consen 127 SWPNSELAGYLMRIAHFLTSVELEIV----------RRLNIIDILLNSLFPKL------------SVETIADSFQMVLHN 184 (1032)
T ss_pred CCcccccchHHHhhhhhheeccceeh----------hhhhhHHHHhhcccccc------------chhhccchhhhhhcc
Confidence 999 33222211 11111111 00011111111100000 000000111111111
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHH
Q 005501 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (693)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (693)
.. ........+|+.+++.||||+||.||||.-+|..+.+...|....+..+..+++-......++-.....+.+
T Consensus 185 ~~------~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~ 258 (1032)
T KOG1178|consen 185 ED------TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGA 258 (1032)
T ss_pred CC------CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhh
Confidence 11 112233456788999999999999999999999999999999999999999988666777777777666666
Q ss_pred HHcCCEEEEecCCC---ChhhHHHHHHHcCCcEEeechHHHHHHHhcCcC-------------CCCCCccccEEEeecCC
Q 005501 419 FLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-------------EGLDWTKIRSFASTGET 482 (693)
Q Consensus 419 L~~G~~lvi~~~~~---~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~-------------~~~~l~~lr~v~~gGe~ 482 (693)
++.++..++++... .+..+.+.+++++++..+.+|++.+.++..... .....+.|+....+||+
T Consensus 259 ~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep 338 (1032)
T KOG1178|consen 259 LLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEP 338 (1032)
T ss_pred HhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCc
Confidence 66666655554333 257899999999999999999998887654221 01112378999999999
Q ss_pred CCcchHHHHHhhCCCCceecccccccccceeccCCcCCC------Ccc--CccCCCCC--CceEEEECCCCCCCCCCCCc
Q 005501 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQP------QAF--GAFSTATM--TAGLVILDECGVPYPDDQPC 552 (693)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~------~~~--~~iG~p~~--~~~~~ild~~~~~~p~G~~g 552 (693)
....+.-.+...+...-...-|++|+.+...+....... ... .+...-+- .+-+.++...+.+.+.++
T Consensus 339 ~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v-- 416 (1032)
T KOG1178|consen 339 LLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGV-- 416 (1032)
T ss_pred cchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeeccCcccCCcc--
Confidence 988887655544433333445888887764432211000 000 00000011 133455555566666555
Q ss_pred eeeEEEecccCCCccccccccccccccccccc---CCCceeeeecceEEEecCCcEEEEeecCCccccCCeeeehHHHHH
Q 005501 553 VGEVGLFPLYLGASDRLLNADHEEVYFRGMPM---YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 629 (693)
Q Consensus 553 iGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~---~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~ 629 (693)
|..+++.++....-. .+...+.+.|.++.. ...+|+|||||+|+..++|.+.|.||.|+|||+||+||+++||++
T Consensus 417 -~~~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t 494 (1032)
T KOG1178|consen 417 -GKGCLGAEQNLSSWV-VDGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNT 494 (1032)
T ss_pred -cceeeccccccccee-eccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhch
Confidence 444443333221100 011123334443332 224679999999999999999999999999999999999999999
Q ss_pred HHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCC-ChHHHHHHHHHHHHhhcCCCceecC
Q 005501 630 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS-QPDKLKMIFSKAIQSKLNPLFKVWC 693 (693)
Q Consensus 630 ~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~-~~~~l~~~l~~~L~~~m~P~~~v~~ 693 (693)
++. .||.|.++.+.++.+...+ +.+++||+...+.+. ....|+.+++.+|+.||+|+++|.+
T Consensus 495 ~v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l 557 (1032)
T KOG1178|consen 495 VVE-VHPDVKEAITLARENSTVG-QTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPL 557 (1032)
T ss_pred hhc-cCcchhhhheeeeeccccC-ceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEh
Confidence 996 8999999999999988776 999999999876543 3467999999999999999988764
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.3e-27 Score=258.43 Aligned_cols=298 Identities=15% Similarity=0.106 Sum_probs=205.1
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch---hcCCCCCCEEEEeCCccccchhHH-HHHHHHcCCEEEEe
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALY 428 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lvi~ 428 (693)
.+.++++.|.|||||||+||+|.++|+++......... ..+++++|+++...++++..+.+. .++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 35678999999999999999999999998765544332 358899999999999888777644 45567788876543
Q ss_pred cCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCC--CCccccEEEeecCCCCcchHHHHHhhCCCCceeccccc
Q 005501 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 506 (693)
Q Consensus 429 ~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (693)
. . ....+++|+++++|.+..+|+.+..|.+....... ...++|.+++|||+++++..+++.+.+ +++++|.||+
T Consensus 163 ~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~ 238 (445)
T TIGR03335 163 G-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGS 238 (445)
T ss_pred C-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCCh
Confidence 2 2 24568899999999999999998877653222221 236899999999999999888887765 6899999999
Q ss_pred ccccceeccCCcCCCCccCccCCCCCCceEEEECCC-CCCCCCCCCceeeEEEecccCCCcccccccccccccccccccC
Q 005501 507 TELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMY 585 (693)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~~-~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~~ 585 (693)
||++.. ..+.. ......+-+.+.+.|+|++ +.++|+|+. |||++..-+-.. ..+ ..|..
T Consensus 239 TE~~~~-~~c~~-----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~--GELvvT~L~~~~-------~r~-----~~Pli 298 (445)
T TIGR03335 239 TEGTMC-GECQA-----VAGLHVPEDLVHLDVYDPRHQRFLPDGEC--GRIVLTTLLKPG-------ERC-----GSLLI 298 (445)
T ss_pred hhhhhe-EEecC-----CCCccccCCceEEEEEcCCCCCCCcCCCc--eEEEEEecCCCC-------ccC-----CceEE
Confidence 998632 22211 1112223346789999976 567999995 999995422100 000 01211
Q ss_pred CCceeeeecceEEEec-C----C----cEEEEeecCCccccCCeeeehHHHHHHHhccC---cccceeE-EEeecCCCCC
Q 005501 586 KGMCLRRHGDIIKRTV-G----G----YIIVQGRADDTMNLGGIKTSSVEIERVCDQAD---ESILETA-AISVSPAGGG 652 (693)
Q Consensus 586 ~g~~~yrTGDl~~~~~-d----G----~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~---p~V~~a~-Vv~~~~~~~g 652 (693)
=|+|||++++.. + | .+...||+||+++++|.+|+|.+||++|. ++ +++..-. ++...+. .+
T Consensus 299 ----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~-~~ 372 (445)
T TIGR03335 299 ----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEE-EG 372 (445)
T ss_pred ----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCC-CC
Confidence 299999999742 2 2 14557999999999999999999999996 74 5554322 3322222 22
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHH
Q 005501 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKA 680 (693)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~ 680 (693)
...+..-|...++...+.+++.+.+.+.
T Consensus 373 ~~~~~v~~e~~~~~~~~~~~~~~~~~~~ 400 (445)
T TIGR03335 373 EITLRVSLECEDKDNCSIHDIQENFTGT 400 (445)
T ss_pred CceEEEEEEecCcccchHHHHHHHHHHH
Confidence 2356666666554333445666666555
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.94 E-value=6.9e-24 Score=231.67 Aligned_cols=455 Identities=15% Similarity=0.135 Sum_probs=302.8
Q ss_pred cCCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 005501 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vp 262 (693)
.++.+||.+|+..-+. .+....++||++|..+|.++|.+|... +++||.|+++.++++|+++++.||+.+|.+++|
T Consensus 779 R~a~tp~~~a~~~~n~--~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIp 856 (1363)
T KOG3628|consen 779 RAAKTPDHIAFTTLNA--RGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIP 856 (1363)
T ss_pred HhhcCCCceEEEEecc--CCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeec
Confidence 4579999999988765 345567999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCC------HHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHh
Q 005501 263 IADSFA------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (693)
Q Consensus 263 l~p~~~------~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (693)
+.|-.. -..+..+++.++++.|+++.......+.......+.+..-..+.+++.... +|..-.
T Consensus 857 v~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~-----------t~~k~~ 925 (1363)
T KOG3628|consen 857 VPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE-----------TIRKRK 925 (1363)
T ss_pred cCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-----------hhhhhh
Confidence 988543 336788999999999999975432222222222221111111222211100 011111
Q ss_pred cccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHH
Q 005501 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (693)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (693)
..... .....++....++.+||+=|.--++|.--||.++|.++++.++.......+.+..-++.++++.-..|+ ...
T Consensus 926 ~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wc 1003 (1363)
T KOG3628|consen 926 KNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWC 1003 (1363)
T ss_pred hhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHH
Confidence 11110 112233344567889999888889999999999999999999999999888888888877777766666 445
Q ss_pred HHHHHcCCEEEEecC---CCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccc------cEEEeecCCCCcc
Q 005501 416 FSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI------RSFASTGETSNVD 486 (693)
Q Consensus 416 ~~~L~~G~~lvi~~~---~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~l------r~v~~gGe~l~~~ 486 (693)
+...++|...++.++ ..++..|+..|++++|.-++.+-+.++...+....+..+++.. -.++..-|.....
T Consensus 1004 LlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~a 1083 (1363)
T KOG3628|consen 1004 LLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIA 1083 (1363)
T ss_pred HHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHH
Confidence 677788998777653 3367889999999999999999888888776533222222211 2233333333333
Q ss_pred hHHHHHhhCCCC-----ce-------------ecccccccccceeccCCcCCCCcc-------------CccCCCCCCce
Q 005501 487 DDLWLSSKAWYN-----AI-------------IESCGGTELSSAYIQGSLLQPQAF-------------GAFSTATMTAG 535 (693)
Q Consensus 487 ~~~~~~~~~~~~-----~l-------------~n~YG~TE~~~~~~~~~~~~~~~~-------------~~iG~p~~~~~ 535 (693)
+...+.+.+... .+ .+.|-..|-+..+.-.+....... -..|+-.++++
T Consensus 1084 li~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1084 LIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 333333332100 01 123333333322211111100000 11377788999
Q ss_pred EEEECCC-CCCCCCCCCceeeEEE-----ecccCCCcccccccccccccccccccCCCceeeeecceEEEec------C-
Q 005501 536 LVILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTV------G- 602 (693)
Q Consensus 536 ~~ild~~-~~~~p~G~~giGel~v-----~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~------d- 602 (693)
+.|++++ ..|+..|+ +||||+ +.+|+...+. ++.+...++.. .....+..|-||||+|.... .
T Consensus 1164 i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~~d~-~~~~~fn~rl~-~g~~~~~sy~RTG~LGFl~~t~~t~~~~ 1239 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTIGDE-LRSNHFNARLS-SGDLLGKSYARTGDLGFLRRTSLTDANV 1239 (1363)
T ss_pred eEEeCCccccccccCC--cceEEeccccccccccccCch-hhhhhhhhhcc-ccccccccceeeeeeeeeeeeecccccc
Confidence 9999975 56888888 699999 4456654221 22222222211 12234677999999998742 2
Q ss_pred ---CcEEEEeecCCccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 603 ---GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 603 ---G~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
.-||++|-+++.+-++|.|-.|.+||..+.+.||.|.+|+|+... ..+|..+.+..
T Consensus 1240 e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~------glvVvviE~~g 1298 (1363)
T KOG3628|consen 1240 ERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT------GLVVVVIECHG 1298 (1363)
T ss_pred eeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC------CeEEEEEEecC
Confidence 348999999999999999999999999998899999999998532 35555555543
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=4.5e-24 Score=210.13 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=158.6
Q ss_pred CCCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 005501 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (693)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl 263 (693)
++.+|+++|+++.+++ .+..+++||+||.++++++|+.|++ . +++||+|+|+++|+++++++++|++++|++++|+
T Consensus 6 ~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 6 LAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA 83 (227)
T ss_pred hhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC
Confidence 4678999999864321 0112479999999999999999998 8 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCC--CCCCCCCCCCCcccHHHHhcccCC
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI--GNDVGIPLREQDLSWKDFLSSVDY 341 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 341 (693)
+ +++++++|++++...... .+..++.+... ..........+..+|.+.......
T Consensus 84 n-------------~s~a~~~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
T TIGR03089 84 G-------------DPDADVVVTGPDRLAAAA-----------GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD 139 (227)
T ss_pred C-------------CCCCCEEEeCcchhhhcc-----------cCCceEEEeccccccCCCCCCCCcccchhhhhhccCC
Confidence 5 789999999886542211 11222332110 000000011223456555442211
Q ss_pred CCCCCCCCCc-cCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchh-HHHHHHH
Q 005501 342 HPRPNYYSPV-YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (693)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (693)
...+. ...++|++.|+||||+ +|+++.... ...+++++|+++ .+|++|..++ ..++.+|
T Consensus 140 -----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 140 -----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred -----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 11111 3456899999999986 666654443 556789999999 9999999998 5688999
Q ss_pred HcCCEEEEecCCCChhhHHHHHHHcCCc
Q 005501 420 LNGATLALYQGSPLERSFGKFVQDAGVT 447 (693)
Q Consensus 420 ~~G~~lvi~~~~~~~~~~~~~i~~~~vt 447 (693)
..|+++++++ .+++..+++.|+++|||
T Consensus 201 ~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 9999999996 78999999999999997
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.89 E-value=4.3e-21 Score=198.56 Aligned_cols=282 Identities=22% Similarity=0.200 Sum_probs=205.7
Q ss_pred cCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccch-hHHHHHHHHcCCEEEE
Q 005501 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMG-PVILFSSFLNGATLAL 427 (693)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~-~~~~~~~L~~G~~lvi 427 (693)
..+.++...|=-||||||+|+-+..++..+....... ....+...+|++..+..++...+ +...+++--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 3455677778999999999999999998765443333 33467889999887776654433 3444555555655543
Q ss_pred ecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCC--CCCccccEEEeecCCCCcchHHHHHhhCCCCceecccc
Q 005501 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (693)
Q Consensus 428 ~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~--~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (693)
..+ -+-+..+++++++++|++.++|+.+..|.+...... ..-.+||.+++|+|+++++..+.+..++ ++..++.||
T Consensus 166 ~~~-g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYG 243 (438)
T COG1541 166 ISG-GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYG 243 (438)
T ss_pred cCC-ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccc
Confidence 332 245778899999999999999999999987654432 2335899999999999999999998887 688899999
Q ss_pred ccccccee-ccCCcCCCCccCccCCCCCCceEEEEC-CCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccc
Q 005501 506 GTELSSAY-IQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (693)
Q Consensus 506 ~TE~~~~~-~~~~~~~~~~~~~iG~p~~~~~~~ild-~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p 583 (693)
.||..++- ..+.... -..-.-++.-+.|+| ..|+++|.|+. |||+++.- +++. .|
T Consensus 244 ltE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~T~L-------------~~~~---~P 300 (438)
T COG1541 244 LTEGFGPGAGECTERN-----GLHIWEDHFIFEIVDPETGEQLPDGER--GELVITTL-------------TKEG---MP 300 (438)
T ss_pred cccccCCccccccccc-----CCCcchhhceeeeecCCcCccCCCCCe--eEEEEEec-------------cccC---cc
Confidence 99997652 2222111 112344567889999 56999999995 99998421 1111 12
Q ss_pred cCCCceeeeecceEEEecC----Cc-----EEEEeecCCccccCCeeeehHHHHHHHhccCcccc-eeEEEeecCCCCCc
Q 005501 584 MYKGMCLRRHGDIIKRTVG----GY-----IIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL-ETAAISVSPAGGGP 653 (693)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~d----G~-----l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~~p~V~-~a~Vv~~~~~~~g~ 653 (693)
.. -|+|||+++..++ |. ..+.||+||+++++|.+|.|..||.+|. +.+.+. +-.++... ... .
T Consensus 301 lI----RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~-~~~-~ 373 (438)
T COG1541 301 LI----RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR-NGG-L 373 (438)
T ss_pred eE----EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec-CCC-C
Confidence 11 2999999999874 32 4689999999999999999999999997 899998 55555444 222 3
Q ss_pred eEEEEEEEecCC
Q 005501 654 EVLVIFVVLKKG 665 (693)
Q Consensus 654 ~~l~a~vv~~~~ 665 (693)
..|.+-|++.++
T Consensus 374 d~L~V~vE~~~~ 385 (438)
T COG1541 374 DELTVRVELENE 385 (438)
T ss_pred ceEEEEEEecCc
Confidence 688888888764
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.67 E-value=1e-14 Score=155.60 Aligned_cols=258 Identities=17% Similarity=0.094 Sum_probs=162.9
Q ss_pred eEEEEeccCCCCCcceEEecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCE-EEEecCCCC
Q 005501 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 433 (693)
Q Consensus 358 ~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~-lvi~~~~~~ 433 (693)
-..+..||||||+|-.+..+........... ....++..++++..+. +..+ .++..+.+... +..++-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcC
Confidence 3567789999999999999988653222211 1223556667665542 1111 22233333222 334443345
Q ss_pred hhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcchHHHHHhhCCCCceeccccccccccee
Q 005501 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAY 513 (693)
Q Consensus 434 ~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 513 (693)
.+..++.|++++++++.++|+.+..|.+.......+ .+++.++++||.+++...+.+.+.+ ++++++.||+|| +...
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 678999999999999999999999998764333333 4789999999999998888888777 589999999999 4433
Q ss_pred ccCCcCCCCccCccCCCCCCceEE--EECCCCCCCCCCCCceeeEEEecccCCCcccccccccccccccccccCCCceee
Q 005501 514 IQGSLLQPQAFGAFSTATMTAGLV--ILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (693)
Q Consensus 514 ~~~~~~~~~~~~~iG~p~~~~~~~--ild~~~~~~p~G~~giGel~v~~gy~~~~~~~~~~~~t~~~f~~~p~~~g~~~y 591 (693)
..+.. +....--..+-+. ++|++++++ .+|+. ..+. ..|.. =|
T Consensus 253 ~eC~~------g~lHl~ed~~~vE~~ivD~~~~~~---------~ViT~-L~n~---------------~~PlI----RY 297 (430)
T TIGR02304 253 STCRC------GTLHLNEDLVHIEKQYLDEHKRFV---------PIITD-FTRT---------------TQPIV----RY 297 (430)
T ss_pred EecCC------CCEEEccccEEEEeeEECCCCceE---------EEEec-CCCc---------------cceEE----ee
Confidence 33311 1111111222333 788766433 23321 1110 01211 29
Q ss_pred eecceEEEecC----Cc----E-EEEeecCCcccc---CC--eeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEE
Q 005501 592 RHGDIIKRTVG----GY----I-IVQGRADDTMNL---GG--IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (693)
Q Consensus 592 rTGDl~~~~~d----G~----l-~~~GR~dd~ik~---~G--~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~ 657 (693)
+|||++++.++ |. | .+.||.||++++ +| ..|.|..|+.++....++|.+.-++... . ..+.
T Consensus 298 rtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~---~--~~l~ 372 (430)
T TIGR02304 298 RLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG---S--AQLE 372 (430)
T ss_pred eCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc---C--CeEE
Confidence 99999998554 32 3 488999999985 34 5569999998854467899988776422 2 4566
Q ss_pred EEEEec
Q 005501 658 IFVVLK 663 (693)
Q Consensus 658 a~vv~~ 663 (693)
..+++.
T Consensus 373 v~~~~~ 378 (430)
T TIGR02304 373 LIADCE 378 (430)
T ss_pred EEEEeC
Confidence 666654
No 130
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=5.1e-16 Score=161.74 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=85.4
Q ss_pred eeeeecceEEE-ecCCcEEEEeecCCccccCC---eeeehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecC
Q 005501 589 CLRRHGDIIKR-TVGGYIIVQGRADDTMNLGG---IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (693)
Q Consensus 589 ~~yrTGDl~~~-~~dG~l~~~GR~dd~ik~~G---~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~ 664 (693)
+||+|||+|++ |+||+|+|.||.| +| ++|+|. ||++|. +||+|.+|+|++++++..| +.++|||++..
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv~~~ 280 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVEAEL 280 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEEECC
Confidence 39999999998 6999999999998 88 799999 999995 9999999999999999888 99999999874
Q ss_pred CCCCChHHHHHHHHHHHHhhcCCCceec
Q 005501 665 GFTSQPDKLKMIFSKAIQSKLNPLFKVW 692 (693)
Q Consensus 665 ~~~~~~~~l~~~l~~~L~~~m~P~~~v~ 692 (693)
..+.++|+++|+++|+. ++|..+.+
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~ 305 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQP 305 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEE
Confidence 46778999999999999 99998765
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.34 E-value=1e-10 Score=129.77 Aligned_cols=433 Identities=14% Similarity=0.117 Sum_probs=260.7
Q ss_pred CCCCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHH-HHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCcEEEe
Q 005501 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN-ALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~-~L~~~-v~~gd~V~i~~~~s--~~~vva~LA~l~aGa~~vp 262 (693)
..++..+|.++-+..+ ....+||..+..++.+.|+ .|.+. .+++|+|.++...+ .++++++++|.-.|.+.+|
T Consensus 105 nhs~~~ta~i~id~kg---k~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDKKG---KATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcCCC---ceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 4567788888887642 3669999999999999999 55555 99999999998655 7999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeecceeeCCccccchhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCC
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (693)
+.+.++.+++..+++....+++++.....+.+... . . .........+|......+..
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~---------~-~------------~~s~~k~v~~w~t~~~k~~~- 238 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFIND---------N-S------------PVSLAKAVAWWKTNDFKGNY- 238 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhc---------c-C------------cccHHHHHHhhhccccccee-
Confidence 99999999999999999999999887543111100 0 0 00000000011000000000
Q ss_pred CCCCCCCCccCCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc--------------------hhcCCCCCCEEEE
Q 005501 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--------------------AHIDLKVGDVYCW 402 (693)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~--------------------~~~~~~~~d~~l~ 402 (693)
.......+..... ..||=||++++|.--|++.+|+ +.+..+... ..++....+.++.
T Consensus 239 -~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 239 -TKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred -ehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 0001111122223 7999999999999999999998 443222211 1123344555555
Q ss_pred eCCccccchh-HHHHHHHHcCCEEEEecCCC--ChhhHHHHHHHcCCcEEeechHHHHHHHhc----C-------cCCCC
Q 005501 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNT----N-------CLEGL 468 (693)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lvi~~~~~--~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~----~-------~~~~~ 468 (693)
.....-..|+ ..++.+|++|.|.+.+|... .|..+..++.+++.+++..=-..+...... . .....
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~ 395 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTP 395 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCC
Confidence 4444444444 44788999999999988643 456788899999999887654444333211 0 01224
Q ss_pred CCccccEEEeecCCCCcchH-----HHHHhhCC-CCc---------------eecccccccccceeccCCcC---C----
Q 005501 469 DWTKIRSFASTGETSNVDDD-----LWLSSKAW-YNA---------------IIESCGGTELSSAYIQGSLL---Q---- 520 (693)
Q Consensus 469 ~l~~lr~v~~gGe~l~~~~~-----~~~~~~~~-~~~---------------l~n~YG~TE~~~~~~~~~~~---~---- 520 (693)
+++++|..++.-+.+..+.. +|++.... ..+ .+..=+.+|.+....-.+.. .
T Consensus 396 d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e 475 (1363)
T KOG3628|consen 396 DLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGE 475 (1363)
T ss_pred CccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccc
Confidence 67899999999888877642 23331110 000 01111223333211111100 0
Q ss_pred ----------------------CCccCccCCCCC-CceEEEECCC-CCCCCCCCCceeeEEE-----ecccCCCcccccc
Q 005501 521 ----------------------PQAFGAFSTATM-TAGLVILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (693)
Q Consensus 521 ----------------------~~~~~~iG~p~~-~~~~~ild~~-~~~~p~G~~giGel~v-----~~gy~~~~~~~~~ 571 (693)
.-....+|.-.| ++.+.|++++ .+.|..++ +||||| +.+|++.+.
T Consensus 476 ~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~e--VGEIwVsS~~~~~~~~al~~---- 549 (1363)
T KOG3628|consen 476 GLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDE--VGEIWVSSNSLGKLFYALDK---- 549 (1363)
T ss_pred eeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCc--ceeEEEecCCcccceeeccc----
Confidence 000011333333 3556677754 67788888 699999 345554332
Q ss_pred cccccccccccc------cCCCceeeeecceEEEecCCcEEEEeecCCcc-ccCCeeeehHHHH----------HHHhcc
Q 005501 572 ADHEEVYFRGMP------MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTM-NLGGIKTSSVEIE----------RVCDQA 634 (693)
Q Consensus 572 ~~~t~~~f~~~p------~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~i-k~~G~ri~~~eIE----------~~L~~~ 634 (693)
.|..-|...| ......+.|||=+|...+ |.++|+|-.+|++ -..|-+....+|- .+. +.
T Consensus 550 --~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~-R~ 625 (1363)
T KOG3628|consen 550 --QTENTFKATPVESSGKPPSNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVM-RG 625 (1363)
T ss_pred --cccceEEeeeccccCCCCccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHH-hc
Confidence 3333343322 233456889999999975 4577777666665 4788887765543 333 45
Q ss_pred CcccceeEEEeecCCCCCceEEEEEEEecCC
Q 005501 635 DESILETAAISVSPAGGGPEVLVIFVVLKKG 665 (693)
Q Consensus 635 ~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~ 665 (693)
.+.|-++.++- . ++++..++-++.
T Consensus 626 v~~VF~~saf~------~-E~~~Vv~~esP~ 649 (1363)
T KOG3628|consen 626 VIAVFDVSAFE------D-EHIVVVVLESPD 649 (1363)
T ss_pred cceEEEEeeee------c-ceEEEEEEeCcc
Confidence 66777777763 2 666666665553
No 132
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=99.20 E-value=3.9e-13 Score=112.45 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=51.0
Q ss_pred ChhhHHHHHHHhHhcCCCCCCCCchhhhHHHhhhcccCCCCC------CccccCCcccccccchHHHHHHhCCcccccc-
Q 005501 41 DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------PLYWFPSLDQSKLTNLGNALEIHGPKLLGRA- 113 (693)
Q Consensus 41 ~hq~~Pf~~~lv~~l~~~r~~~~~~~plfqv~~~~~~~~~~~------~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~- 113 (693)
+||+|||++ |++.|++.|+.+.+ |||||||++|+..... .....+.....++|||.+.+.+.++++.+.+
T Consensus 1 ~hq~~Pf~~-lv~~l~~~r~~~~~--plfqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~ 77 (91)
T PF13745_consen 1 EHQDYPFER-LVEALGPPRDPSRN--PLFQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLE 77 (91)
T ss_dssp -T--S-HHH-HHHHT-----TTS---SS-SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEE
T ss_pred CCccCCHHH-HHHHhCcccCCccc--cccCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEE
Confidence 699999999 99999999985555 5599999999976532 1123344567899999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhhCH
Q 005501 114 YKDPITSFRLFQKFTVEHP 132 (693)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~ 132 (693)
|++ ++|++++|++|
T Consensus 78 Y~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 78 YNT-----DLFSEETIERM 91 (91)
T ss_dssp EET-----TT--HHHHHHH
T ss_pred EEh-----HhCCHHHHhcC
Confidence 999 99999999875
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.94 E-value=3.4e-08 Score=103.40 Aligned_cols=235 Identities=17% Similarity=0.089 Sum_probs=127.0
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc---hhcCCCCC--CEEEEeCCccccc---h--hHHHHHHHHcCC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVG--DVYCWPTNLGWVM---G--PVILFSSFLNGA 423 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~--d~~l~~~~~~~~~---~--~~~~~~~L~~G~ 423 (693)
+.+++..++-||||||.|--+.+.+..+........ ..+..... -.++...|-.... + .......+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 456778889999999998656665555544332222 22222112 2233333322211 1 122233344555
Q ss_pred EEEEecCCCChhhHHHHH----HHcCCcEEeechHHHHHHHhcCcCC--CCCCc-cccEEEeec------CCCCcc-hHH
Q 005501 424 TLALYQGSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCLE--GLDWT-KIRSFASTG------ETSNVD-DDL 489 (693)
Q Consensus 424 ~lvi~~~~~~~~~~~~~i----~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~-~lr~v~~gG------e~l~~~-~~~ 489 (693)
.-.+-....+.+.+...+ .+.++..++..|.++-.++...... ...|+ ..+.+-.|| |.++.+ ...
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 533322334555544443 3556777888777666555432222 23333 345555554 445543 345
Q ss_pred HHHhhCCC---CceecccccccccceeccCCcCCCCccCccCCCCCCceEEEECC-CCCCCCCCCCceeeEEEecccCCC
Q 005501 490 WLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFPLYLGA 565 (693)
Q Consensus 490 ~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ild~-~~~~~p~G~~giGel~v~~gy~~~ 565 (693)
.+.+.+.- ..+++.||+||....+..+.... .++|-. +.|.|+ +.+++|.|++ |-|.+-..+...
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~--------~~~p~w-V~iRDp~tl~~~~~Ge~--Gli~vidl~~~s 315 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH--------FHVPPW-VIIRDPETLEPLPPGET--GLIQVIDLANTS 315 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCCc--------ccCCCe-EEEECCCCCcCCCCCCe--eEEEEEcccccC
Confidence 55555532 36999999999876544331111 133333 777785 5789999985 888773221110
Q ss_pred cccccccccccccccccccCCCceeeeecceEEEecC--------CcEEEEeecCCccccCCee
Q 005501 566 SDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG--------GYIIVQGRADDTMNLGGIK 621 (693)
Q Consensus 566 ~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~d--------G~l~~~GR~dd~ik~~G~r 621 (693)
.++ ..-|.|+|.+..+ .++.++||.+.- .+||=.
T Consensus 316 -------------------~p~--~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs 357 (365)
T PF04443_consen 316 -------------------YPG--FILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCS 357 (365)
T ss_pred -------------------CCc--EEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcH
Confidence 112 3569999988655 279999998743 345543
No 134
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.85 E-value=4e-09 Score=83.80 Aligned_cols=58 Identities=29% Similarity=0.414 Sum_probs=50.8
Q ss_pred HHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCC--Ccee
Q 005501 626 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP--LFKV 691 (693)
Q Consensus 626 eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P--~~~v 691 (693)
|||++|. +||+|.+|+|++++++..| +.++|||++ +.++|+++++++||.||+| .+++
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v 60 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFV 60 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEE
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe------eecccccchhhhCCCcceeeEEEEc
Confidence 8999995 9999999999999998888 999999998 3489999999999999999 5554
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.41 E-value=4.3e-06 Score=92.81 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=51.4
Q ss_pred eeecceEEEec--CC--cEEEEeecCCccccCCeeeehHHHHHHHhcc----CcccceeEEEeecCCCCCceEEEEEEEe
Q 005501 591 RRHGDIIKRTV--GG--YIIVQGRADDTMNLGGIKTSSVEIERVCDQA----DESILETAAISVSPAGGGPEVLVIFVVL 662 (693)
Q Consensus 591 yrTGDl~~~~~--dG--~l~~~GR~dd~ik~~G~ri~~~eIE~~L~~~----~p~V~~a~Vv~~~~~~~g~~~l~a~vv~ 662 (693)
|+.||+++... ++ .++|+||.+.++++.|+++.-.+|+.+|.+. .-.+.+..+.+....... ..-+.|+.+
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~ 449 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWEL 449 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEE
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEe
Confidence 89999999853 45 7999999999999999999999999999633 234566666654322232 567777777
Q ss_pred cCC
Q 005501 663 KKG 665 (693)
Q Consensus 663 ~~~ 665 (693)
...
T Consensus 450 ~~~ 452 (528)
T PF03321_consen 450 EGE 452 (528)
T ss_dssp CS-
T ss_pred CCC
Confidence 653
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.77 E-value=0.0021 Score=71.78 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=37.9
Q ss_pred eeecceEEEec----CCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 591 RRHGDIIKRTV----GGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 591 yrTGDl~~~~~----dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
|+.||.++... --.|.|+||.+.++++.|+++.-.+++.+|.
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~ 455 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVE 455 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHH
Confidence 89999999864 2468999999999999999999999999885
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.52 E-value=0.008 Score=66.58 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=37.2
Q ss_pred eeecceEEEe----cCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 591 RRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 591 yrTGDl~~~~----~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
||.||+++.. .--.+.|++|.+.+..+.|.+..-.++-.++.
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~ 468 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVK 468 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHH
Confidence 8999999874 34579999999999999999999999988875
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.46 E-value=0.028 Score=62.58 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=37.3
Q ss_pred eeecceEEEe----cCCcEEEEeecCCccccCCeeeehHHHHHHHh
Q 005501 591 RRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (693)
Q Consensus 591 yrTGDl~~~~----~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~L~ 632 (693)
||.||+++.. .--.+.|++|.+.+..+.|.+..-.++-.++.
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~ 462 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVT 462 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHH
Confidence 8999999874 34679999999999999999999999988885
No 139
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=94.88 E-value=0.11 Score=43.35 Aligned_cols=65 Identities=23% Similarity=0.378 Sum_probs=46.0
Q ss_pred CeeeehHHHHHHHhccCcccc-eeEEEeecCCCCCceEEEEEEEecCCCCC---ChHHHHHHHHHHHHhhcC
Q 005501 619 GIKTSSVEIERVCDQADESIL-ETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLN 686 (693)
Q Consensus 619 G~ri~~~eIE~~L~~~~p~V~-~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~---~~~~l~~~l~~~L~~~m~ 686 (693)
|.+|+|..||++|. ++|++. +..++ +....+. ..+...|.+.++..- +.+++++.++++|.+.+.
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~-v~~~~~~-D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg 69 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIV-VTREGGL-DELTVRVELRPGFSDDAEDLEALAERIAERLKERLG 69 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEE-EEEETTE-EEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEE-EEcCCCC-cEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC
Confidence 88999999999995 999999 44444 4333333 788888888875422 246778888887777654
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=90.22 E-value=1.2 Score=47.62 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=68.7
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEE
Q 005501 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~--~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il 285 (693)
-+|..|+...+..+|+.|... +.+||+|.++..-+. .-+-..+|+.++|++++|+.+. .-++-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 589999999999999999999 999999999876221 1156788999999999999884 456778899999999999
Q ss_pred eecce
Q 005501 286 TQDFI 290 (693)
Q Consensus 286 ~~~~~ 290 (693)
+.+.+
T Consensus 188 ~tps~ 192 (438)
T COG1541 188 ATPSY 192 (438)
T ss_pred EChHH
Confidence 98864
No 141
>PLN02736 long-chain acyl-CoA synthetase
Probab=71.19 E-value=53 Score=38.00 Aligned_cols=101 Identities=9% Similarity=-0.085 Sum_probs=72.0
Q ss_pred EEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+ .......++.++|++..+++-+.... ...++++..|+.++.++....++.+...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 346877765443 33445678999999988777665433 33568888999998887777788999999999999999
Q ss_pred echHHHHHHHhcCcCCCCCCccccEEEee
Q 005501 451 TVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (693)
Q Consensus 451 ~~P~~l~~l~~~~~~~~~~l~~lr~v~~g 479 (693)
+.+..+..+..... .++.++.+++-
T Consensus 156 ~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 99887766654321 23556666544
No 142
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=70.62 E-value=24 Score=38.62 Aligned_cols=94 Identities=13% Similarity=0.172 Sum_probs=66.5
Q ss_pred CcEEEEEecCCCCCCcc--eeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH--HHHHHHHHHHhCcEEEecCC
Q 005501 191 NTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR--AVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 191 d~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~--~vva~LA~l~aGa~~vpl~p 265 (693)
+.++.+.... |.+|.. -.+|.+++...+...++.+... +.+||++.++.+.+.. .....+++.+.|+..+|...
T Consensus 86 ~~i~~i~~TS-GTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~ 164 (445)
T TIGR03335 86 KDIYTIHETS-GTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK 164 (445)
T ss_pred HHeEEEEeCC-CCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc
Confidence 3455554322 233433 3578999998888888888888 9999999998876643 23445788899999887653
Q ss_pred CCCHHHHHHHHHhcCeeEEEeec
Q 005501 266 SFAAREIATRLRVSKAKGIFTQD 288 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~ 288 (693)
.+....++++.++..++...
T Consensus 165 ---~~~~~~~i~~~~~t~l~~~p 184 (445)
T TIGR03335 165 ---CTFPIRIIESYRPTGIVASV 184 (445)
T ss_pred ---hhHHHHHHHHhCCCEEEECH
Confidence 23456788999999887654
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=69.65 E-value=22 Score=34.85 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=55.9
Q ss_pred CCCcEEEEEecCCCCCCcceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCC
Q 005501 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~--~~vva~LA~l~aGa~~vpl~p 265 (693)
.++.+|++.... -.|.+.+...+ ... +.++|++. .+|-.- .+...+++++.+|++.+.+ +
T Consensus 148 ~~~D~a~l~yTs--------g~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~ 210 (227)
T TIGR03089 148 DATAPALVAGGG--------EWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-T 210 (227)
T ss_pred CCCcceeeeccc--------cccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-c
Confidence 457778766554 23555443332 444 88999999 888654 4556799999999999887 7
Q ss_pred CCCHHHHHHHHHhcCe
Q 005501 266 SFAAREIATRLRVSKA 281 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~ 281 (693)
.+.++++-..+++.++
T Consensus 211 rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 211 HPDPARLDQIAETERV 226 (227)
T ss_pred CCCHHHHHHHHHhhcC
Confidence 8999999999888775
No 144
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=68.46 E-value=28 Score=37.43 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=65.1
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.||.+|++. =.+-.+|...+...+. ......++++++++..+.+-+..+ +..+++++..|+..+.++.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 467788766 2345577777654333 333467889999988877765333 3456788889999999987
Q ss_pred CCChhhHHHHHHHcCCcEEee
Q 005501 431 SPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~ 451 (693)
....+.+...+++.++.++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 777889999999999999996
No 145
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=67.64 E-value=28 Score=37.72 Aligned_cols=97 Identities=13% Similarity=0.050 Sum_probs=67.7
Q ss_pred CcEEEEEecCCCCCCcce--eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCC
Q 005501 191 NTVAIVWREDRCDESAVN--LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIAD 265 (693)
Q Consensus 191 d~~Al~~~~~~~~~~~~~--~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~--~~vva~LA~l~aGa~~vpl~p 265 (693)
+.++.+... +|.+|... .+|..++......+++.+... +++||++......+. .....+++.++.|+..+++++
T Consensus 75 ~~~~~~~~T-SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 153 (422)
T TIGR02155 75 EQVVRIHAS-SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISG 153 (422)
T ss_pred HHcEEEEEC-CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCC
Confidence 344544322 22444433 457777777767777778777 999999887665442 222345678899999999877
Q ss_pred CCCHHHHHHHHHhcCeeEEEeecc
Q 005501 266 SFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
.. .+++...+++.++.++++...
T Consensus 154 ~~-~~~~~~~i~~~~~t~l~~~Ps 176 (422)
T TIGR02155 154 GQ-TEKQVQLIQDFKPDIIMVTPS 176 (422)
T ss_pred CC-HHHHHHHHHHHCCCEEEEcHH
Confidence 65 577889999999999998874
No 146
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=60.70 E-value=50 Score=37.13 Aligned_cols=97 Identities=20% Similarity=0.138 Sum_probs=68.1
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++..- ++.++...+|.+.+...+ .......++.+++++..+++-+... ...+|+++..|+..+..+.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 35677776432 233444567888775433 3334456899999999888777655 3446788889999887776
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
....+.+...++..++..+.+...
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 666788899999999988876553
No 147
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=59.61 E-value=92 Score=34.43 Aligned_cols=85 Identities=15% Similarity=-0.034 Sum_probs=64.2
Q ss_pred ecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeec
Q 005501 376 WTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 376 ~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
+|.+.+...+ .......++++++++..+.+-+... +..+++++..|+..+..+.......+...+++.++..+...
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEY-LEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 7877764433 3333457789999999887776643 34567889999999888876677889999999999999998
Q ss_pred hHHHHHHHh
Q 005501 453 PSLVKAWRN 461 (693)
Q Consensus 453 P~~l~~l~~ 461 (693)
......+.+
T Consensus 111 ~~~~~~~~~ 119 (521)
T PRK06187 111 SEFVPLLAA 119 (521)
T ss_pred chHHHHHHH
Confidence 877666544
No 148
>PRK09274 peptide synthase; Provisional
Probab=58.66 E-value=51 Score=37.09 Aligned_cols=99 Identities=12% Similarity=0.037 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccCCC-CCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEec
Q 005501 354 PVDAVVNILFSSGTT-GEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (693)
Q Consensus 354 ~~~~~a~il~TSGST-G~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~ 429 (693)
.++.+|++....+++ +..+-..+|.+.+...+ .......+++++|++...++-+...- ..+++++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~-~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFF-ALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHH-HHHHHHHHcCeEEEEcC
Confidence 345666554333221 12233357877764433 33334578999999998877654443 34668888999988887
Q ss_pred CCCChhhHHHHHHHcCCcEEeech
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P 453 (693)
.....+.+...+++.++..+...+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 666677888899999998888754
No 149
>PLN03052 acetate--CoA ligase; Provisional
Probab=58.45 E-value=74 Score=37.42 Aligned_cols=99 Identities=13% Similarity=0.064 Sum_probs=69.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++.-..|..|.+ ...+|.+.+.. .+.......+++++|++..+++-+..+-. .+++++..|+..+.++.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~vi-a~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVI-IYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH-HHHHHHHcCCEEEeeCC
Confidence 356777654332221222 24578877644 33344456789999999998887655543 46688889999998887
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...++.+...+++.++.++++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 778889999999999999887654
No 150
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.77 E-value=89 Score=34.55 Aligned_cols=85 Identities=9% Similarity=-0.058 Sum_probs=62.9
Q ss_pred EecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+ .......++.++|++..+.+-+...- ..+++++..|+..+..+.......+...+++.++..+..
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 108 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWV-IAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFV 108 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEE
Confidence 47877764433 33334568899999988877664433 446688889999888887667788999999999999998
Q ss_pred chHHHHHHH
Q 005501 452 VPSLVKAWR 460 (693)
Q Consensus 452 ~P~~l~~l~ 460 (693)
.+.....+.
T Consensus 109 ~~~~~~~~~ 117 (513)
T PRK07656 109 LGLFLGVDY 117 (513)
T ss_pred chhhHHHHH
Confidence 887665543
No 151
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=56.62 E-value=66 Score=37.58 Aligned_cols=102 Identities=10% Similarity=-0.024 Sum_probs=72.7
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+. ......++.++|++..+++-+.... ...++++..|+..+.+.....++.+...+++.++.++.
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL-IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 3467776654433 3344678999999988877664433 34568888999999887777788999999999999999
Q ss_pred echHHHHHHHhcCcCCCCCCccccEEEeec
Q 005501 451 TVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (693)
Q Consensus 451 ~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG 480 (693)
.....+..+.... ..+++++.+++-+
T Consensus 184 ~~~~~~~~l~~~~----~~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDIS----SQLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHh----hccCCceEEEEEC
Confidence 9888877765532 1234566665544
No 152
>PRK06839 acyl-CoA synthetase; Validated
Probab=55.51 E-value=94 Score=34.19 Aligned_cols=96 Identities=16% Similarity=0.036 Sum_probs=68.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch----hcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEec
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~ 429 (693)
.|+.+|.+. .+..+|++.+...+..... ..++.+++++...++-+... +..+++++..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 356666652 1356888877554444333 35788999998877766443 344668888899988887
Q ss_pred CCCChhhHHHHHHHcCCcEEeechHHHHHH
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 459 (693)
....+..+...+++.+++.+...+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 666778888999999999999888766544
No 153
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=54.41 E-value=1.3e+02 Score=35.48 Aligned_cols=118 Identities=10% Similarity=-0.009 Sum_probs=78.5
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc---hh---cCCCCC-----------CEEEEeCCccccchhHHHH
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AH---IDLKVG-----------DVYCWPTNLGWVMGPVILF 416 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~---~~~~~~-----------d~~l~~~~~~~~~~~~~~~ 416 (693)
.++.+|++-... |.+ ...+|.+.+...+.... .. .++.++ |++..+++-+.. ++...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHH
Confidence 356777753322 221 23577777654443322 22 378887 888877765533 234466
Q ss_pred HHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEeec
Q 005501 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (693)
Q Consensus 417 ~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gG 480 (693)
+++..|+..+.+.....++.+...+++-++.++++.+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 88999999988877778889999999999999999888877776532 1246677666543
No 154
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=54.25 E-value=1.1e+02 Score=34.71 Aligned_cols=85 Identities=16% Similarity=0.100 Sum_probs=64.2
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+. ......++.++|++...++-+.... ..+|+++..|+..+..+....++.+...+++.+++.+.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY-FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 4578887754443 3334578999999988877665433 44668888999988887777778899999999999999
Q ss_pred echHHHHHH
Q 005501 451 TVPSLVKAW 459 (693)
Q Consensus 451 ~~P~~l~~l 459 (693)
..+..+..+
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 988876543
No 155
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=54.19 E-value=62 Score=35.06 Aligned_cols=109 Identities=13% Similarity=0.038 Sum_probs=72.6
Q ss_pred ceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcE
Q 005501 372 KAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (693)
Q Consensus 372 KgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~ 448 (693)
-|+..|.+.+...+. +....+++.+|||+..+.|-+ ..+....+++-..|..++...+......+.=.+++.++-.
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~-~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNS-YEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCCh-HHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 345566666654433 344578999999998766544 3333345577778888877765555566777799999999
Q ss_pred EeechHHHHH-----HHhc---------CcCCCCCCccccEEEeecC
Q 005501 449 LGTVPSLVKA-----WRNT---------NCLEGLDWTKIRSFASTGE 481 (693)
Q Consensus 449 l~~~P~~l~~-----l~~~---------~~~~~~~l~~lr~v~~gGe 481 (693)
++..|.+-.. +.+. +..+...++.|+.+++.+|
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 9998876432 3322 1234456889999998884
No 156
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=53.65 E-value=1e+02 Score=35.66 Aligned_cols=95 Identities=13% Similarity=-0.045 Sum_probs=68.1
Q ss_pred CCCeEEEEeccCCCCCcceEEecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC
Q 005501 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (693)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~ 431 (693)
++.+|++ +-+-..+ ....+|.+.+.. .+.......+++++|++..+++-+...-. .+|+++..|+..+.+...
T Consensus 75 ~~~~A~~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~-~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALI-YECPYLK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI-AMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEE-EEcCCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEeeCCC
Confidence 4666654 4321111 235688887744 44444456799999999998887755543 466888899998888877
Q ss_pred CChhhHHHHHHHcCCcEEeech
Q 005501 432 PLERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~P 453 (693)
..++.+...|++.++.++.+..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 7888999999999999998764
No 157
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=53.46 E-value=96 Score=35.59 Aligned_cols=96 Identities=15% Similarity=0.039 Sum_probs=67.1
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++ +.+..+|. .-.+|.+.+... +.......+++++|++..+++-+...- ..+++++..|+..+....
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA-FAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCC
Confidence 35677765 43332332 345787776443 333445678999999998887664443 346688899999888877
Q ss_pred CCChhhHHHHHHHcCCcEEeech
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (693)
......+...+++.++.++.+..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 77778899999999999988754
No 158
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=53.37 E-value=90 Score=35.78 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=68.8
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++.. +..+| ....+|.+.+... +.......+++++|++..+++-+...- ..+++++..|+..+.++.
T Consensus 70 ~p~~~Al~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWE-GDEPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA-IAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEeccCC
Confidence 4577776643 22123 2456788876443 333445678999999999887665443 446688889999888877
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...++.+...+++.++.++.+...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 777889999999999999887654
No 159
>PLN02246 4-coumarate--CoA ligase
Probab=53.32 E-value=80 Score=35.33 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=67.2
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++-. . ++-.+|++.+...+. ......++.++|++..+++-+... +..+|+++..|+..+..+.
T Consensus 36 ~~~~~a~~~~---~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDG---A----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF-VLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEec---C----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHHcCEEEecCCC
Confidence 4567776522 1 123588887754433 333456899999998887766433 3346788888999888887
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~ 458 (693)
......+...++..++..+.........
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDK 135 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHH
Confidence 6677889999999999988876655443
No 160
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=53.22 E-value=88 Score=36.00 Aligned_cols=97 Identities=15% Similarity=0.047 Sum_probs=68.9
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++.. +.. ......+|.+.+...+. ......++.++|++...++-+...-. .+++++..|+..+..+.
T Consensus 80 ~p~~~Al~~~-~~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~-~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWE-GDD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAV-AMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEE-CCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCEEEecCC
Confidence 3577776642 211 11356688888755443 33345789999999988777655443 46688899999998887
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...++.+...+++.++.++.+...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 777889999999999999887543
No 161
>PRK08316 acyl-CoA synthetase; Validated
Probab=52.58 E-value=93 Score=34.48 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=63.6
Q ss_pred EEecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|...+...+... ....++.+++++..+++-+... +..+++++..|+..+..+.....+.+...+++.++..+.
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY-ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 457777765443333 3446789999999888777653 345678889999988888766778899999999999998
Q ss_pred echHHHHHHH
Q 005501 451 TVPSLVKAWR 460 (693)
Q Consensus 451 ~~P~~l~~l~ 460 (693)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 162
>PRK13388 acyl-CoA synthetase; Provisional
Probab=52.32 E-value=1.2e+02 Score=34.12 Aligned_cols=84 Identities=13% Similarity=-0.052 Sum_probs=62.3
Q ss_pred EecchhHHHHHHHh---chhcCC-CCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 375 PWTQLSSIRCTAEG---WAHIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
.+|...+...+... ....++ .++|++...++-+...- ..+++++..|+..+.++.....+.+...+++.++..+.
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v-~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEML-FWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHH-HHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 57888775544433 345677 68999988887776543 35668889999999888777778899999999999988
Q ss_pred echHHHHHH
Q 005501 451 TVPSLVKAW 459 (693)
Q Consensus 451 ~~P~~l~~l 459 (693)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876654433
No 163
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=52.25 E-value=95 Score=34.45 Aligned_cols=101 Identities=14% Similarity=0.045 Sum_probs=68.6
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++.... .|.. -.+|...+...+.. .....++.++|++..+.+-+...- ..+++++..|+..+..+.
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 456677654321 1211 23677766444333 334578999999998877665443 345688889999888877
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 459 (693)
...++.+...+++.+++.+...+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 77788999999999999998887655433
No 164
>PLN02654 acetate-CoA ligase
Probab=52.10 E-value=1.1e+02 Score=35.58 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=68.1
Q ss_pred CCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC
Q 005501 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (693)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~ 431 (693)
++.+|++ +.....| ....+|.+.+...+ .......+++++|++..+++-....- ..+++++..|+..+.+...
T Consensus 103 ~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v-~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP-IAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCCC
Confidence 4667765 4221111 23568888875443 34445678999999999887765443 3466888999999888877
Q ss_pred CChhhHHHHHHHcCCcEEeechH
Q 005501 432 PLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
..++.+...++..++.++.+...
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 78889999999999999887654
No 165
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=51.92 E-value=1.1e+02 Score=35.41 Aligned_cols=95 Identities=14% Similarity=-0.076 Sum_probs=67.2
Q ss_pred CCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCC
Q 005501 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (693)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~ 431 (693)
++.+|++.... .| ....+|.+.+...+ .......++.++|++..+++-+...- ..+++++..|+..+.++..
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v-~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETV-VAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCcEEEeeCCC
Confidence 46677654322 22 13567888775443 33345578999999999887665443 4466888999999888877
Q ss_pred CChhhHHHHHHHcCCcEEeechH
Q 005501 432 PLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 432 ~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...+.+...++..++.++.+...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 77788999999999988887653
No 166
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=51.33 E-value=92 Score=34.97 Aligned_cols=83 Identities=12% Similarity=-0.020 Sum_probs=63.4
Q ss_pred ecchhHHHHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHH
Q 005501 376 WTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSL 455 (693)
Q Consensus 376 ~sh~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~ 455 (693)
+|.+.+...+......+.-.++|++..+++-+..+- ..+|+++..|+..+.++.....+.+...++..++..+.....+
T Consensus 46 ~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~ 124 (539)
T PRK06334 46 LSYNQVRKAVIALATKVSKYPDQHIGIMMPASAGAY-IAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQL 124 (539)
T ss_pred ccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchHHH-HHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHH
Confidence 788888776666665555568999988888776544 3467889999998888766667889999999999998887766
Q ss_pred HHHH
Q 005501 456 VKAW 459 (693)
Q Consensus 456 l~~l 459 (693)
+..+
T Consensus 125 ~~~~ 128 (539)
T PRK06334 125 MQHL 128 (539)
T ss_pred HHHH
Confidence 5544
No 167
>PRK08315 AMP-binding domain protein; Validated
Probab=51.25 E-value=86 Score=35.23 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=60.4
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|++.+...+. ......++.+++++..+.+-+..+ +..+|+++..|+..+..+.......+...+++.+++.+.
T Consensus 42 ~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 120 (559)
T PRK08315 42 LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEW-VLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALI 120 (559)
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEE
Confidence 3478887754433 333456889999998887766544 345778999999999888777778899999999999988
Q ss_pred echH
Q 005501 451 TVPS 454 (693)
Q Consensus 451 ~~P~ 454 (693)
....
T Consensus 121 ~~~~ 124 (559)
T PRK08315 121 AADG 124 (559)
T ss_pred Eecc
Confidence 7654
No 168
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=51.24 E-value=68 Score=35.95 Aligned_cols=88 Identities=11% Similarity=-0.021 Sum_probs=68.5
Q ss_pred eEEecchhHHHHHHHhchh---cC--CCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCc
Q 005501 373 AIPWTQLSSIRCTAEGWAH---ID--LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVT 447 (693)
Q Consensus 373 gV~~sh~~l~~~~~~~~~~---~~--~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt 447 (693)
|..+|++.+...+...... .+ ++.+|++...+|-+..+... .+++++.|+.+.-.....+...+...++.-+.+
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 8889998876655444433 33 78899999998888766554 458889999988887777888999999999999
Q ss_pred EEeechHHHHHHHh
Q 005501 448 VLGTVPSLVKAWRN 461 (693)
Q Consensus 448 ~l~~~P~~l~~l~~ 461 (693)
+++...-.+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998777766643
No 169
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=51.15 E-value=1.1e+02 Score=35.25 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=67.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++ +-+..+|. .-.+|.+.+.. .+.......++.++|++..+++-+...- ..+++++..|+..+.+..
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v-~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV-FAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 35667764 43323332 34578877644 3344445679999999998888765443 446688899999888877
Q ss_pred CCChhhHHHHHHHcCCcEEeech
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (693)
....+.+...|++.++.++.+..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 77778899999999999888754
No 170
>PRK07514 malonyl-CoA synthase; Validated
Probab=51.12 E-value=1e+02 Score=33.97 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=63.1
Q ss_pred eEEecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 005501 373 AIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (693)
Q Consensus 373 gV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l 449 (693)
+..+|...+... +.......++.++|++....+-+... +..+++++..|+..+..+.......+...++..+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~-~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA-LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 346777766443 33334457899999998887766433 34567888899998888877777889999999999999
Q ss_pred eechHHHHHH
Q 005501 450 GTVPSLVKAW 459 (693)
Q Consensus 450 ~~~P~~l~~l 459 (693)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887665543
No 171
>PRK07798 acyl-CoA synthetase; Validated
Probab=49.83 E-value=1.2e+02 Score=33.71 Aligned_cols=85 Identities=12% Similarity=-0.066 Sum_probs=60.6
Q ss_pred EEecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
-.+|...+... +.......++.++|++..+++-+.+. +..+|+++..|+..+..+.....+.+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 35777776443 33334457889999988876555433 234567888899888887666778899999999999998
Q ss_pred echHHHHHH
Q 005501 451 TVPSLVKAW 459 (693)
Q Consensus 451 ~~P~~l~~l 459 (693)
........+
T Consensus 106 ~~~~~~~~~ 114 (533)
T PRK07798 106 YEREFAPRV 114 (533)
T ss_pred EchhhHHHH
Confidence 877655444
No 172
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=49.80 E-value=61 Score=30.27 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=39.1
Q ss_pred HHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcC
Q 005501 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLN 686 (693)
Q Consensus 625 ~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~ 686 (693)
.+|+..+. +.|+|.+|.|+...+ ..+||+-+- .. .....++++.+++.+.+.-.
T Consensus 78 ~~i~~~v~-~~~~V~~A~vvv~~~-----~a~Vav~~~-~~-~~~~~~i~~~V~~~v~~~~p 131 (177)
T PF09580_consen 78 DRIANRVK-KVPGVEDATVVVTDD-----NAYVAVDLD-FN-RFNTKKIKKKVEKAVKSADP 131 (177)
T ss_pred HHHHHHHh-cCCCceEEEEEEECC-----EEEEEEEec-cc-ccchhHHHHHHHHHHHHhCC
Confidence 56888885 999999999998643 667777665 22 34457888888888776543
No 173
>PRK05857 acyl-CoA synthetase; Validated
Probab=49.77 E-value=83 Score=35.31 Aligned_cols=94 Identities=11% Similarity=-0.002 Sum_probs=66.4
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.|+.+|++.. .| ...+|.+.+...+. ......++.+++++..+++-+..+-. .+|+++..|+..+.++.
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~-~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYL-SVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHH-HHHHHHHcCeEEEecCc
Confidence 4566666432 22 13578887754443 33345688999999988877765543 46688889999998887
Q ss_pred CCChhhHHHHHHHcCCcEEeechHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSL 455 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~ 455 (693)
....+.+..+++..++..+...+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 6777889999999888888876643
No 174
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=49.55 E-value=1.1e+02 Score=34.80 Aligned_cols=96 Identities=14% Similarity=-0.047 Sum_probs=68.2
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|.+.- +-.+|.+.+...+. ......++.+++++..+++-+... +..+|+++..|+..+..+.
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 4566776541 13477777754433 333457889999999887766554 3456788889999888876
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 459 (693)
....+.+...+++.++..+.........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 66778899999999999998877655443
No 175
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=48.53 E-value=91 Score=35.03 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=65.3
Q ss_pred EecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+... ....++.+++++..+.+-+.+. +..+|+++..|+..+..+.....+.+...+++.+++.+..
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 46777765444333 3456889999999887777665 4457788999999998887777889999999999999998
Q ss_pred chHHHHHHH
Q 005501 452 VPSLVKAWR 460 (693)
Q Consensus 452 ~P~~l~~l~ 460 (693)
.+.....+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766554
No 176
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=46.84 E-value=1.4e+02 Score=34.60 Aligned_cols=93 Identities=16% Similarity=-0.028 Sum_probs=65.7
Q ss_pred CCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCC
Q 005501 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (693)
Q Consensus 356 ~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~ 432 (693)
+++|++... .+|. ...+|.+.+...+ .......+++++|++..+++-+..... .+++++..|+..+.+....
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~-~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV-AMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHhCeEEEecCCCC
Confidence 455654432 2232 3457887765433 333456789999999998887755443 4568888999988887777
Q ss_pred ChhhHHHHHHHcCCcEEeech
Q 005501 433 LERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 433 ~~~~~~~~i~~~~vt~l~~~P 453 (693)
..+.+...+++.++.++.+..
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 778899999999998888754
No 177
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=46.57 E-value=36 Score=33.54 Aligned_cols=68 Identities=26% Similarity=0.272 Sum_probs=54.2
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCC--HHHHHHHHHh-cCeeEEEeecc
Q 005501 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA--AREIATRLRV-SKAKGIFTQDF 289 (693)
Q Consensus 222 lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~--~~~l~~~l~~-~~~~~il~~~~ 289 (693)
+-..+.+. .-||.-=.+.+|.+..|.+.--++.-++.+-||++|+++ .+++..+++. +.+++++....
T Consensus 98 ~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 98 LIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred HHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 34445666 788966667889999999999999999999999999765 6788887764 58999887753
No 178
>PRK09088 acyl-CoA synthetase; Validated
Probab=45.77 E-value=1.4e+02 Score=32.68 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=64.6
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.++++-...| ..+|.+.+...+. ......++.+++++..+++-+... +..+|+++..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 3566665433223 3478877744433 333456788999998887766553 3446788889999888887
Q ss_pred CCChhhHHHHHHHcCCcEEeech
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVP 453 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P 453 (693)
...++.+...+++.+++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 77778899999999999887654
No 179
>PRK12583 acyl-CoA synthetase; Provisional
Probab=45.57 E-value=1.3e+02 Score=33.67 Aligned_cols=93 Identities=13% Similarity=0.005 Sum_probs=66.0
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++..- ++..+|.+.+...+.. .....++.+++++..+.+-+.. .+..+|+++..|+..+..+.
T Consensus 31 ~p~~~a~~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~v~l~~ 102 (558)
T PRK12583 31 FPDREALVVRH-------QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAE-WLLTQFATARIGAILVNINP 102 (558)
T ss_pred CCCCeEEEecC-------CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHhhCCEEEecCC
Confidence 35666664421 1234788777544333 3345688999999887766654 33457789999999998887
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
......+...+++.+++.+.+.+.
T Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 103 AYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred CCCHHHHHHHHHhcCCcEEEEecc
Confidence 777889999999999999887764
No 180
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=45.56 E-value=1.2e+02 Score=34.05 Aligned_cols=95 Identities=18% Similarity=0.101 Sum_probs=67.5
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhch----hcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEec
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~ 429 (693)
.++.+|++.. | -.+|++.+...+..... ..++++++++..+++-+...- ..+|+++..|+..+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP-IATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEeccC
Confidence 3566776532 2 24788777554443332 468999999998877665543 44678889999999887
Q ss_pred CCCChhhHHHHHHHcCCcEEeechHHHHH
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~ 458 (693)
.......+...+++.+++.+.........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 77777889999999999998887655443
No 181
>PLN02574 4-coumarate--CoA ligase-like
Probab=45.46 E-value=1.4e+02 Score=33.77 Aligned_cols=99 Identities=21% Similarity=0.156 Sum_probs=67.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHH---HHHHhchh-cCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEec
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~---~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~ 429 (693)
.++.+|++- +.+|. .+|.+.+.. .+...... .++.++|++..+.+-+..+ +..+|+++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcC
Confidence 346666653 22232 367776533 33333344 7899999999887755433 344678888999998887
Q ss_pred CCCChhhHHHHHHHcCCcEEeechHHHHHHH
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 460 (693)
.......+...+++.++..++..+.....+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 6667778888999999998888877665543
No 182
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.85 E-value=1e+02 Score=34.03 Aligned_cols=83 Identities=17% Similarity=0.066 Sum_probs=60.8
Q ss_pred ecchhHH---HHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeec
Q 005501 376 WTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 376 ~sh~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
+|.+.+. +.+.......++++++++...++-+.+.- ..+++++..|+..+..+.......+...+++.+++.+...
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF-EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 6666653 33334445578899999998877765543 3467889999999888766667788889999999998887
Q ss_pred hHHHHHH
Q 005501 453 PSLVKAW 459 (693)
Q Consensus 453 P~~l~~l 459 (693)
+.....+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7665544
No 183
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=44.83 E-value=1.8e+02 Score=31.76 Aligned_cols=94 Identities=17% Similarity=0.044 Sum_probs=67.1
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.|+.+|++.. .-.+|...+...+... ....++.+++++..+.+-+.+. +..+++++..|+..+..+.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4577776531 1347877765443333 3456788999999888777664 4567789999999999887
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~ 457 (693)
......+...+++.++..+........
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 111 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEA 111 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhH
Confidence 777788889999999888877654443
No 184
>PRK07788 acyl-CoA synthetase; Validated
Probab=44.68 E-value=93 Score=34.93 Aligned_cols=84 Identities=14% Similarity=0.058 Sum_probs=62.6
Q ss_pred EecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+ .......++.++|++...++-+.. .+..+|+++..|+..+..+.....+.+...+++.++..+..
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG-FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 47777764433 333345688999999887655432 23456788999999999987777889999999999999998
Q ss_pred chHHHHHH
Q 005501 452 VPSLVKAW 459 (693)
Q Consensus 452 ~P~~l~~l 459 (693)
.+.+...+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766554
No 185
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.65 E-value=1.4e+02 Score=33.48 Aligned_cols=85 Identities=11% Similarity=0.018 Sum_probs=62.1
Q ss_pred EecchhHHHHHHHh---chhc-CCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 375 PWTQLSSIRCTAEG---WAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
.+|.+.+...+... .... ++.+++++..+++-+. -.+..+|+++..|+..+..+.......+...+++.+++.+.
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 47887765444333 3344 8999999988877554 23345778888999998888766778899999999999998
Q ss_pred echHHHHHHH
Q 005501 451 TVPSLVKAWR 460 (693)
Q Consensus 451 ~~P~~l~~l~ 460 (693)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8876655443
No 186
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=44.54 E-value=80 Score=28.94 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=35.4
Q ss_pred HHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHh
Q 005501 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (693)
Q Consensus 625 ~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~ 683 (693)
..|.+.+. +.|+|.+|.|+...+ ..+|++-.-......-.+++++.+.+.+.+
T Consensus 57 ~~Ia~~v~-~v~~V~dA~vvVtg~-----~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 57 DEIASEAA-KVKGVKDATVVITGN-----YAYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHh-cCCCCceEEEEEECC-----EEEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 34667674 899999999998643 677777543322222246788888777766
No 187
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=44.40 E-value=87 Score=33.33 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=53.7
Q ss_pred cCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechHHHHHH
Q 005501 392 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (693)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l 459 (693)
.++.++|++....+-+.. .+..+++++..|+.++..+.......+..++++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 678999999888777744 3345678888999998888767778899999999999999887765544
No 188
>PRK13383 acyl-CoA synthetase; Provisional
Probab=44.32 E-value=88 Score=34.80 Aligned_cols=84 Identities=10% Similarity=0.001 Sum_probs=62.2
Q ss_pred EecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+. ......++.++|++...++-+.+.- ..+|+++..|+..+..+.....+.+...+++.++..+..
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFV-TAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 367666644333 3334568899999988877554433 446688889999998887777889999999999999998
Q ss_pred chHHHHHH
Q 005501 452 VPSLVKAW 459 (693)
Q Consensus 452 ~P~~l~~l 459 (693)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87765544
No 189
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=44.25 E-value=1.3e+02 Score=33.80 Aligned_cols=84 Identities=10% Similarity=-0.035 Sum_probs=61.5
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+. ......++.++|++...++-+...- ..+|+++..|+..+..+.......+...+++.+++.+.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~-~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP-VAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 4578888754443 3334568899999988776665443 34578888999999887666778899999999999988
Q ss_pred echHHHHH
Q 005501 451 TVPSLVKA 458 (693)
Q Consensus 451 ~~P~~l~~ 458 (693)
........
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 190
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=44.12 E-value=98 Score=39.54 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=66.9
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.|+.+|++...+...+......+|.+.+...+ .......++.+++++..+++-+..+- ..+++++..|+..+.++.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i-~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLV-VAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHH-HHHHHHHhhCcEEeccCC
Confidence 46777776433211111123468888775433 33444568899999988887765543 446789999999998887
Q ss_pred CCChhhHHHHHHHcCCcEEeec
Q 005501 431 SPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
...++.+...++..++..+...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 6667788888999888877754
No 191
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=43.76 E-value=1.3e+02 Score=33.31 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=63.2
Q ss_pred EecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+ .......++.+++++..+++-+..... .+|+++..|+..+..+.....+.+...+++.++..+..
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVT-AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 57887765433 333345678899999888777655443 46688889998888887777889999999999999988
Q ss_pred chHHHHHHH
Q 005501 452 VPSLVKAWR 460 (693)
Q Consensus 452 ~P~~l~~l~ 460 (693)
.+..+..+.
T Consensus 104 ~~~~~~~~~ 112 (515)
T TIGR03098 104 SSERLDLLH 112 (515)
T ss_pred ccchhhhhH
Confidence 877665553
No 192
>PRK07529 AMP-binding domain protein; Validated
Probab=42.59 E-value=1.5e+02 Score=34.08 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=64.2
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|.+.+..+.. ..++..+|.+.+...+ .......+++++|++...++-+...- ..+|+++..| .++.++.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~-~~~lA~~~~G-i~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETH-FALWGGEAAG-IANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhC-EEEeCCC
Confidence 457777765533221 1234567888764433 33445678999999998888765543 4456777777 4444455
Q ss_pred CCChhhHHHHHHHcCCcEEeec
Q 005501 431 SPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
...++.+...+++.++..+...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5677889999999999998875
No 193
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.37 E-value=1.1e+02 Score=34.61 Aligned_cols=84 Identities=11% Similarity=-0.032 Sum_probs=63.2
Q ss_pred EecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+... ....++..+|++..+++-+... +..+|+++..|+..+..+.....+.+...+++.++..+..
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 37887775444333 3456889999999887776553 3457788889999888887777889999999999999988
Q ss_pred chHHHHHH
Q 005501 452 VPSLVKAW 459 (693)
Q Consensus 452 ~P~~l~~l 459 (693)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 194
>PLN02614 long-chain acyl-CoA synthetase
Probab=42.31 E-value=1.7e+02 Score=33.91 Aligned_cols=86 Identities=5% Similarity=-0.155 Sum_probs=64.3
Q ss_pred EecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+.. .+.......++.++|++...++-+... +...++++..|+..+.......++.+...+++.++.+++.
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~ 157 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFV 157 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEE
Confidence 467776644 333344567899999998877766543 3446688889999988887777889999999999999998
Q ss_pred chHHHHHHHh
Q 005501 452 VPSLVKAWRN 461 (693)
Q Consensus 452 ~P~~l~~l~~ 461 (693)
....+..+..
T Consensus 158 ~~~~~~~~~~ 167 (666)
T PLN02614 158 EEKKISELFK 167 (666)
T ss_pred CHHHHHHHHH
Confidence 8776665543
No 195
>PRK13391 acyl-CoA synthetase; Provisional
Probab=41.37 E-value=1.8e+02 Score=32.27 Aligned_cols=97 Identities=15% Similarity=0.068 Sum_probs=67.6
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.|+.++.+...+| | .+|.+.+...+. ......++.+++++..+.+-+...-. .+|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~-~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLE-VCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhccEEecccc
Confidence 4566776655443 2 377777644333 33345688899999888776655433 36688889999988887
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~ 458 (693)
......+...+++.++..+...+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 7777889999999999998887765543
No 196
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=40.95 E-value=1.7e+02 Score=33.88 Aligned_cols=119 Identities=9% Similarity=-0.061 Sum_probs=75.6
Q ss_pred CCCeEEEEe--ccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEec
Q 005501 355 VDAVVNILF--SSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (693)
Q Consensus 355 ~~~~a~il~--TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~ 429 (693)
++.+|+... ..|..|.- ..+|.+.+...+. ......++.++|++..+++-+... +...|+++..|+..+-..
T Consensus 56 p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~ 132 (660)
T PLN02430 56 PDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLY 132 (660)
T ss_pred CCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEec
Confidence 455665432 23333321 2357776654443 333457899999998877766443 334568899999988887
Q ss_pred CCCChhhHHHHHHHcCCcEEeechHHHHHHHhcCcCCCCCCccccEEEee
Q 005501 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (693)
Q Consensus 430 ~~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~g 479 (693)
....++.+...++..++++++.....+..++.... ...+.++.++.-
T Consensus 133 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 133 DTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred cCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 77778899999999999999988765544443211 113456655543
No 197
>PRK13382 acyl-CoA synthetase; Provisional
Probab=40.86 E-value=1.3e+02 Score=33.66 Aligned_cols=82 Identities=12% Similarity=-0.050 Sum_probs=60.4
Q ss_pred EecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+...+. ......++.+++++..+++-+.. .+..+|+++..|+..+..+.......+...+++.+++.+..
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 477776644333 33345688999999988876655 34567788889999998886666788999999999999887
Q ss_pred chHHHH
Q 005501 452 VPSLVK 457 (693)
Q Consensus 452 ~P~~l~ 457 (693)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 198
>PRK06164 acyl-CoA synthetase; Validated
Probab=40.38 E-value=1.1e+02 Score=34.21 Aligned_cols=91 Identities=16% Similarity=0.042 Sum_probs=64.8
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.+++.|++ . +.-.+|.+.+...+ .......++.++|++..+.+-+...- ..+|+++..|+..+..+.
T Consensus 23 ~p~~~a~~--~-------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 92 (540)
T PRK06164 23 RPDAVALI--D-------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWV-VLFLACARLGATVIAVNT 92 (540)
T ss_pred CCCCeEEe--c-------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCcEEEecCC
Confidence 35667765 1 12347777764433 33334578899999988877765443 346688899999988887
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
......+...+++.+++.+...+.
T Consensus 93 ~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 93 RYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred CCCcHHHHHHHHhcCccEEEEccc
Confidence 777788999999999999887654
No 199
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=39.92 E-value=1.3e+02 Score=33.74 Aligned_cols=96 Identities=19% Similarity=0.110 Sum_probs=65.9
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|.+-.. +| ..+|++.+...+... ....++.+++++...++-+.... ..+|+++..|+..+..+.
T Consensus 41 ~p~~~a~~~~~---~~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAV---TG----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecC---CC----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCc
Confidence 35666664222 12 457888775444333 34568899999988877665544 346788999998887776
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~ 457 (693)
....+.+...+++.++..+...+..+.
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 666678889999999988877655443
No 200
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=39.56 E-value=1.6e+02 Score=32.88 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=65.0
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.|+.+|++..-..+ .....+|.+.+... +.......++.+++++..+++-+...- ..+++++..|+.++..+.
T Consensus 35 ~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFT-ALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCEEEeccCc
Confidence 35667766532211 11345788776443 333334578899999998877665443 346688889988887776
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
....+.+...++..+++.+.+.+.
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 666778889999999988887553
No 201
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=39.55 E-value=1.3e+02 Score=34.01 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=58.5
Q ss_pred EEecchhHHHHHHHhch---h-cCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 005501 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (693)
Q Consensus 374 V~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l 449 (693)
..+|...+...+..... . .++.++|++..+++-+... +..+|+++..|+..+..+.......+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 35788777554443332 2 4789999998877766543 34566888899888877766677889999999999988
Q ss_pred eechHH
Q 005501 450 GTVPSL 455 (693)
Q Consensus 450 ~~~P~~ 455 (693)
...+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 202
>PLN03102 acyl-activating enzyme; Provisional
Probab=39.35 E-value=1.1e+02 Score=34.81 Aligned_cols=82 Identities=15% Similarity=0.032 Sum_probs=61.0
Q ss_pred EecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+... ....++.++|++...++-+.... ..+|+++..|+.++..+.....+.+...++..+++.+..
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~-~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMY-EMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 47777765544433 34568999999988887654333 346688889999888887777889999999999999988
Q ss_pred chHHHH
Q 005501 452 VPSLVK 457 (693)
Q Consensus 452 ~P~~l~ 457 (693)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765543
No 203
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.20 E-value=1.6e+02 Score=33.13 Aligned_cols=83 Identities=17% Similarity=0.093 Sum_probs=60.4
Q ss_pred EEecchhHHHHHHHhch---h-cCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEE
Q 005501 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (693)
Q Consensus 374 V~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l 449 (693)
..+|.+.+...+..... . .++.++|++..+++-+...- ..+|+++..|+..+..+.....+.+...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~-~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP-VAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 35788887555444433 2 47899999998877664443 3466888899998888766677889999999999988
Q ss_pred eechHHHH
Q 005501 450 GTVPSLVK 457 (693)
Q Consensus 450 ~~~P~~l~ 457 (693)
........
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87655433
No 204
>PRK13390 acyl-CoA synthetase; Provisional
Probab=38.53 E-value=2e+02 Score=31.78 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=64.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++... +| -.+|.+.+...+. ......++.++|++..+.+-+.+.- ..+|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL-VVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHhCCEEecccc
Confidence 45666665422 22 3578887754433 3344568899999988877665443 446788889999888877
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...+..+...++..++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 677788888899888888776543
No 205
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=36.84 E-value=1.5e+02 Score=34.29 Aligned_cols=86 Identities=9% Similarity=-0.087 Sum_probs=64.0
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+. ......++.++|++..+++-+.... ...++++..|+..+-+......+.+...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWI-IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 3578877654443 3345578999999988887665533 34668889999988887777778999999999999998
Q ss_pred echHHHHHHH
Q 005501 451 TVPSLVKAWR 460 (693)
Q Consensus 451 ~~P~~l~~l~ 460 (693)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766655443
No 206
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=36.44 E-value=1.6e+02 Score=32.92 Aligned_cols=90 Identities=11% Similarity=0.021 Sum_probs=62.4
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.++++ +.. | ..+|.+.+...+. ......++.++|++...++-+... +..+++++..|+..+..+.
T Consensus 36 ~pd~~a~~-~~~---~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVV-DNH---G----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEF-TIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEE-cCC---C----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccch
Confidence 45666654 322 2 3468777644333 333457899999998876655433 3456789999998888876
Q ss_pred CCChhhHHHHHHHcCCcEEeec
Q 005501 431 SPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
....+.+...++..++.++.+.
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 6677888899999999887764
No 207
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=35.22 E-value=1.4e+02 Score=32.14 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=53.3
Q ss_pred HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeechH
Q 005501 386 AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 386 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
.......++..+|++...++-+.+ .+..+++.+..|+..+..+.....+.+...+++.++..+...+.
T Consensus 13 a~~l~~~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 13 AKALKAQGIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 334456789999999988887754 34457788999999998887777788889999999998876654
No 208
>PLN02479 acetate-CoA ligase
Probab=34.55 E-value=1.8e+02 Score=32.85 Aligned_cols=81 Identities=10% Similarity=-0.020 Sum_probs=60.8
Q ss_pred EecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+. ......++.++|++...++-+...- ..+++++..|+..+..+.....+.+...+++.++..+..
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY-EAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 467776644433 3344568999999998887665443 346688889999888887777789999999999999998
Q ss_pred chHHH
Q 005501 452 VPSLV 456 (693)
Q Consensus 452 ~P~~l 456 (693)
.+..+
T Consensus 124 ~~~~~ 128 (567)
T PLN02479 124 DQEFF 128 (567)
T ss_pred chhhh
Confidence 77654
No 209
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=34.26 E-value=4.6e+02 Score=27.25 Aligned_cols=76 Identities=11% Similarity=-0.032 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CCCEEEEEcCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEee
Q 005501 212 YKELREQVMLVANALDTMFS-KGDAIAIDMPMTVRA-VIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 212 Y~eL~~~a~~lA~~L~~~v~-~gd~V~i~~~~s~~~-vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 287 (693)
|....+..+++...|.+.++ +.+.+.+...++.+. ..++.+.++.|-..+..++.+....+...++..+++++...
T Consensus 27 ~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 27 SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 44444445555566655522 344456666665554 44555666778776666665555445566777787777664
No 210
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.69 E-value=2.3e+02 Score=31.62 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCCCCCcce--eecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHH-HHHHHHHHHhCcEEEec
Q 005501 189 EDNTVAIVWREDRCDESAVN--LMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRA-VIIYLAIILAGYVVVSI 263 (693)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~--~lTY~eL~~~a~~lA~~L~~~--v~~gd~V~i~~~~s~~~-vva~LA~l~aGa~~vpl 263 (693)
.++.+|.+.... +.+|..+ .+|.+.+.. +..+..+... +.++|++..++|-.-.+ ...+++.+..|+..+..
T Consensus 174 ~~~~~~~i~~TS-GTTG~PK~v~~s~~~~~~--~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~ 250 (539)
T PRK07008 174 DENQASSLCYTS-GTTGNPKGALYSHRSTVL--HAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLP 250 (539)
T ss_pred CcccceEEEECC-CCCCCCcEEEEecHHHHH--HHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEe
Confidence 456666655433 2444433 456555532 2233334333 78899988777643322 22346778899988876
Q ss_pred CCCCCHHHHHHHHHhcCeeEEEeecc
Q 005501 264 ADSFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
.+...++.+...+++.++..+.....
T Consensus 251 ~~~~~~~~~~~~l~~~~vt~~~~~P~ 276 (539)
T PRK07008 251 GPDLDGKSLYELIEAERVTFSAGVPT 276 (539)
T ss_pred cCCcCHHHHHHHHHHcCCEEEEechH
Confidence 77788899999999999999877653
No 211
>PRK08162 acyl-CoA synthetase; Validated
Probab=33.47 E-value=1.5e+02 Score=33.06 Aligned_cols=84 Identities=14% Similarity=-0.044 Sum_probs=62.9
Q ss_pred EecchhHHHHHHHhc---hhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+.... ...++.++|++...++-+.... ..+++++..|+..+..+.......+...+++.+++.+..
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMV-EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 478887755444333 3468899999988877765443 346688889998888877777789999999999999998
Q ss_pred chHHHHHH
Q 005501 452 VPSLVKAW 459 (693)
Q Consensus 452 ~P~~l~~l 459 (693)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87765544
No 212
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=33.09 E-value=1.5e+02 Score=32.86 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=61.2
Q ss_pred ecchhHH---HHHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeec
Q 005501 376 WTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 376 ~sh~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
+|...+. +.+.......++.+++++..+.+-+...- ..+++++..|+..+..+.......+...+++.+++.+...
T Consensus 12 ~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~ 90 (509)
T PRK12406 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFF-EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAH 90 (509)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEc
Confidence 5555553 33444445678899999988877665443 4466888889998888877777889999999999999887
Q ss_pred hHHHHHH
Q 005501 453 PSLVKAW 459 (693)
Q Consensus 453 P~~l~~l 459 (693)
......+
T Consensus 91 ~~~~~~~ 97 (509)
T PRK12406 91 ADLLHGL 97 (509)
T ss_pred cchhhhh
Confidence 7666654
No 213
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.97 E-value=2.9e+02 Score=31.17 Aligned_cols=86 Identities=12% Similarity=-0.061 Sum_probs=62.7
Q ss_pred eEEecchhHHHHHHHhch----hcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcE
Q 005501 373 AIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (693)
Q Consensus 373 gV~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~ 448 (693)
.-.+|.+.+...+..... ..++.++|++...++-+.... ..+++++..|+..+..+.......+...++..++..
T Consensus 36 ~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (576)
T PRK05620 36 QEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEV 114 (576)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcE
Confidence 345677776544333332 368889999988877665443 446788889999888887677788999999999999
Q ss_pred EeechHHHHHH
Q 005501 449 LGTVPSLVKAW 459 (693)
Q Consensus 449 l~~~P~~l~~l 459 (693)
+.+.+.....+
T Consensus 115 ~i~~~~~~~~~ 125 (576)
T PRK05620 115 IVADPRLAEQL 125 (576)
T ss_pred EEEChhhHHHH
Confidence 99887665544
No 214
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=32.45 E-value=2.3e+02 Score=22.39 Aligned_cols=64 Identities=25% Similarity=0.276 Sum_probs=50.0
Q ss_pred eecHHHHHHHHHHHHH---HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeE
Q 005501 209 LMTYKELREQVMLVAN---ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKG 283 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~---~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~ 283 (693)
..||+||++.-..+++ .|... +...|.|+|+-=++.. -.-.+-|+-..+.++++.-+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 7899999998877665 45555 8899999998766532 233456788889999999999999876
No 215
>PRK05850 acyl-CoA synthetase; Validated
Probab=32.20 E-value=4.4e+02 Score=29.69 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=65.9
Q ss_pred CCCCeEEEEec-cCC-CCCcceEEecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEe
Q 005501 354 PVDAVVNILFS-SGT-TGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (693)
Q Consensus 354 ~~~~~a~il~T-SGS-TG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~ 428 (693)
.++.+|++... ++. .|. ...+|.+.+...+.. .....+ .++|++..+++-+...- ..+++++..|+..+..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~-~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYI-VAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHH-HHHHHHHHcCceEEec
Confidence 45667665321 111 122 246788776443333 233445 57899988887665433 4467888899998888
Q ss_pred cCC---CChhhHHHHHHHcCCcEEeechHHHHHH
Q 005501 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (693)
Q Consensus 429 ~~~---~~~~~~~~~i~~~~vt~l~~~P~~l~~l 459 (693)
+.. ...+.+...|++.++..+...+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 642 2456788999999999999888766554
No 216
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.90 E-value=3.8e+02 Score=30.05 Aligned_cols=93 Identities=18% Similarity=0.110 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhc---hhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++...-+. .+|.+.+...+.... ...++.++|++...++-+..+ +..+|+++..|+..+.+..
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45666665544333 788888765444333 345588999988777655433 3456788889999999887
Q ss_pred CCChhhHHHHHHHcCCcEEeechH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~ 454 (693)
...+..+...++..++..+.....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 667788888899988988888766
No 217
>PRK07470 acyl-CoA synthetase; Validated
Probab=31.83 E-value=2e+02 Score=32.05 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=59.7
Q ss_pred EecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+... +.......++.+++++...++-+..... .+++++..|+..+..+.....+.+...+++.+++.+..
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 110 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFE-SMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMIC 110 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEE
Confidence 4677776443 3333445788999999888776654433 35688889998888887777788999999999999988
Q ss_pred chHHH
Q 005501 452 VPSLV 456 (693)
Q Consensus 452 ~P~~l 456 (693)
.+...
T Consensus 111 ~~~~~ 115 (528)
T PRK07470 111 HADFP 115 (528)
T ss_pred cchhH
Confidence 76543
No 218
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=31.74 E-value=1.2e+02 Score=28.57 Aligned_cols=46 Identities=9% Similarity=0.022 Sum_probs=34.7
Q ss_pred eecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHH
Q 005501 209 LMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAII 254 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~~~vva~LA~l 254 (693)
-+||.|+.+.+.++|..+.+..+....+.|...++-..++..||-.
T Consensus 16 ~~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 16 LVSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred eecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHH
Confidence 7999999999999999999873222345577777777777776643
No 219
>PRK06178 acyl-CoA synthetase; Validated
Probab=31.62 E-value=2.2e+02 Score=31.98 Aligned_cols=85 Identities=15% Similarity=0.007 Sum_probs=63.2
Q ss_pred EecchhHHHHHHHh---chhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+...+... ....++++++++...++-+.... ..+|+++..|+..+..+.......+...+++.++..+.+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH-IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH-HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 47777765544333 33568889999988877776543 446688889998887776667788999999999999999
Q ss_pred chHHHHHHH
Q 005501 452 VPSLVKAWR 460 (693)
Q Consensus 452 ~P~~l~~l~ 460 (693)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766554
No 220
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=30.58 E-value=4.6e+02 Score=29.90 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=64.8
Q ss_pred CCCCeEEEEec--cCCCCCcceEEecchhHHHHHHHhc---hhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEe
Q 005501 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (693)
Q Consensus 354 ~~~~~a~il~T--SGSTG~PKgV~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~ 428 (693)
.++.+|++.-. .+++|. ...+|.+.+...+.... ... +.++|++...++-+... +..+|+++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhH-HHHHHHHHHcCceeEec
Confidence 35667765421 112332 34578877654433322 233 78999998888777543 34467888899988766
Q ss_pred -cCCCC--hhhHHHHHHHcCCcEEeechHHHHH
Q 005501 429 -QGSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 458 (693)
Q Consensus 429 -~~~~~--~~~~~~~i~~~~vt~l~~~P~~l~~ 458 (693)
+.... .+.+...+++.++..+...+.....
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 33322 5678899999999999988766544
No 221
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=30.54 E-value=2.2e+02 Score=31.07 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=43.2
Q ss_pred eecHHHHHHHHHHH--------------HHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHH-HHHhCcEEEec--------
Q 005501 209 LMTYKELREQVMLV--------------ANALD-TM-FSKGDAIAIDMPMTVRAVIIYLA-IILAGYVVVSI-------- 263 (693)
Q Consensus 209 ~lTY~eL~~~a~~l--------------A~~L~-~~-v~~gd~V~i~~~~s~~~vva~LA-~l~aGa~~vpl-------- 263 (693)
.-||.+|.+.+..+ |..|. .. +++||.| .+..++.+.-| +...|++++=+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeeccccccc
Confidence 34677776665443 33333 34 8999965 34445555555 78899988733
Q ss_pred ------CCCCCHHHHHHHHHhcC
Q 005501 264 ------ADSFAAREIATRLRVSK 280 (693)
Q Consensus 264 ------~p~~~~~~l~~~l~~~~ 280 (693)
.-....+.++..++..+
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhcccc
Confidence 33567889999888654
No 222
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=29.81 E-value=2.4e+02 Score=31.17 Aligned_cols=84 Identities=8% Similarity=0.029 Sum_probs=60.1
Q ss_pred EecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+...+. ......++++++++....+-+... +..+++++..|+..+..+.......+...+++.+++.+..
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~ 108 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDF-PIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFV 108 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEE
Confidence 467766644333 333456888999988776555322 3456788889999888887777889999999999999988
Q ss_pred chHHHHHH
Q 005501 452 VPSLVKAW 459 (693)
Q Consensus 452 ~P~~l~~l 459 (693)
.......+
T Consensus 109 ~~~~~~~~ 116 (508)
T TIGR02262 109 SGELLPVI 116 (508)
T ss_pred chhhHHHH
Confidence 77655443
No 223
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=29.51 E-value=4.9e+02 Score=25.93 Aligned_cols=70 Identities=11% Similarity=0.157 Sum_probs=47.8
Q ss_pred HHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHh------C--cEEEecCCC---CCHHHHHHHHHhcCeeEEE
Q 005501 219 VMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILA------G--YVVVSIADS---FAAREIATRLRVSKAKGIF 285 (693)
Q Consensus 219 a~~lA~~L~~~--v~~gd~V~i~~~~s~~~vva~LA~l~a------G--a~~vpl~p~---~~~~~l~~~l~~~~~~~il 285 (693)
.+++.+.+.+. +.+|++|+|.+.-+.+.++.+..+... | ...+-+|.. +..+.+..+.+..+..+.+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 44556667776 899999999999999998766555332 2 344555553 3445567777888877776
Q ss_pred eec
Q 005501 286 TQD 288 (693)
Q Consensus 286 ~~~ 288 (693)
.+.
T Consensus 93 ~~~ 95 (258)
T PRK10696 93 EEQ 95 (258)
T ss_pred EEe
Confidence 653
No 224
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=29.21 E-value=3.3e+02 Score=27.94 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=40.1
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeec
Q 005501 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (693)
Q Consensus 230 v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (693)
++||+.|.=-..-+.-.-.+++|.. -|.-++.+-|..-..+...+|+..++.+++++.
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 8999966555555555555665555 566555555544455567889999999999997
No 225
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=29.17 E-value=1.6e+02 Score=32.97 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=61.4
Q ss_pred EEecchhHHHHH---HHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+ .......++.++|++..+++-+...-. .+++++..|+..+..+.....+.+...+++.++..+.
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE-AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 357887774433 333445789999999888777665544 3568888999988887766778899999999999988
Q ss_pred echHHHHH
Q 005501 451 TVPSLVKA 458 (693)
Q Consensus 451 ~~P~~l~~ 458 (693)
+.......
T Consensus 117 ~~~~~~~~ 124 (542)
T PRK06018 117 TDLTFVPI 124 (542)
T ss_pred EccccHHH
Confidence 76654433
No 226
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=28.67 E-value=1.6e+02 Score=33.10 Aligned_cols=79 Identities=14% Similarity=-0.040 Sum_probs=58.4
Q ss_pred EecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++.....+.+...+++.+++.+..
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~-~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYL-EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 467777654433 3334578999999998877665443 346688889999988887777788999999999988887
Q ss_pred chH
Q 005501 452 VPS 454 (693)
Q Consensus 452 ~P~ 454 (693)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 227
>PLN03051 acyl-activating enzyme; Provisional
Probab=26.14 E-value=4.7e+02 Score=28.82 Aligned_cols=97 Identities=8% Similarity=-0.043 Sum_probs=63.6
Q ss_pred CCCcEEEEEecCCCCCCcce--eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCcEEEecC
Q 005501 189 EDNTVAIVWREDRCDESAVN--LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~--~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~-~vva~LA~l~aGa~~vpl~ 264 (693)
.|+.+|++....+ .+|..+ .+|++.+...+... .... +.++|++...+|-+.. ....+++.+..|+..+..+
T Consensus 117 ~~~d~a~i~yTSG-TTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 117 PVESVTNILFSSG-TTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred CccceEEEEeCCC-CCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 3567777665432 334322 56777665433222 2334 7889988776664331 1235778889999988776
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
.....+++...+++.++.++.....
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~ 217 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPS 217 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHH
Confidence 5556788999999999999988764
No 228
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=26.12 E-value=2.6e+02 Score=32.58 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=63.3
Q ss_pred ceEEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcE
Q 005501 372 KAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (693)
Q Consensus 372 KgV~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~ 448 (693)
+...+|.+.+...+. ......+++++|++..+++-+...- ...++++..|+..+-......++.+...+++.++..
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWL-ASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 356778887754443 3345678999999988777654333 346688889998887766667788888999999999
Q ss_pred EeechHHHHHHH
Q 005501 449 LGTVPSLVKAWR 460 (693)
Q Consensus 449 l~~~P~~l~~l~ 460 (693)
+.+....+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 888776655443
No 229
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.04 E-value=3.4 Score=49.08 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=78.7
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeecc
Q 005501 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 211 TY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
+ -|+.++.+++|+.+... ..-.+++-++---+.++.-.+....+ +..+..++-.-+.+++....+++.+-+..+...
T Consensus 130 ~-~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs 207 (1032)
T KOG1178|consen 130 N-SELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVLHNEDTREIRVGGNDSTALLSFTSGS 207 (1032)
T ss_pred c-cccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhhhccCCCcceeeecccccceEeecccc
Confidence 5 78889999999999887 55555555554444444444444555 566667777777777777777777777666643
Q ss_pred eeeCCcccc-chhhHhhcCCCceEEEcCCCCCCCCCCCCCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCC
Q 005501 290 ILRGGRKFP-LYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (693)
Q Consensus 290 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGST 368 (693)
.- ..+... ....+. ...+|.. ..++.......+..+.+|+.+||
T Consensus 208 ~G-~pk~v~~~~~sl~-----------------------~~fdw~~-----------~~f~~t~s~~~~~~~~~~~~d~i 252 (1032)
T KOG1178|consen 208 TG-VPKGVAGTHFSLA-----------------------NAFDWMF-----------TTFPPTGSDRFTFKTSVYFDDTI 252 (1032)
T ss_pred cc-cccccchhHHHHH-----------------------hhhhhcc-----------ccCCcCccchhhhhheeecccch
Confidence 21 000000 000000 0001100 01122222223578889999999
Q ss_pred CCcceEEecchhHH
Q 005501 369 GEPKAIPWTQLSSI 382 (693)
Q Consensus 369 G~PKgV~~sh~~l~ 382 (693)
+++++..+.+.+.+
T Consensus 253 ~~~~~~~L~~~~~l 266 (1032)
T KOG1178|consen 253 QKFIGALLFNGNNL 266 (1032)
T ss_pred HHHHhhHhhcCcee
Confidence 99999999998743
No 230
>PRK07867 acyl-CoA synthetase; Validated
Probab=25.80 E-value=3e+02 Score=30.65 Aligned_cols=83 Identities=11% Similarity=-0.048 Sum_probs=59.6
Q ss_pred EecchhHHHHHHHhc---hh-cCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 375 PWTQLSSIRCTAEGW---AH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
.+|...+...+.... .. .+..+++++...++-+.... ..+++++..|+.++.++....++.+...+++.++..+.
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFS-LLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 477777654443333 23 35677888887777554333 44678899999999888777778899999999999998
Q ss_pred echHHHHH
Q 005501 451 TVPSLVKA 458 (693)
Q Consensus 451 ~~P~~l~~ 458 (693)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766543
No 231
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=25.25 E-value=1.8e+02 Score=30.94 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=48.6
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHHhcCeeEEEee
Q 005501 220 MLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 220 ~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (693)
..|.-.|+.+ +++||-|.+ .+.-|+...=+++..|+.+|-+|-+ ..++.++..+... .|.||.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 4456667877 999996544 4667888899999999999887754 5788888888875 5666654
No 232
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.17 E-value=3e+02 Score=30.75 Aligned_cols=82 Identities=15% Similarity=-0.022 Sum_probs=59.1
Q ss_pred EecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+...+.. .....++.+++++...++-+... +..+|+++..|+..+..+.......+...+++.++..+..
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 4777776544333 23346888999998777655443 3457788889999888876667788899999999998888
Q ss_pred chHHHH
Q 005501 452 VPSLVK 457 (693)
Q Consensus 452 ~P~~l~ 457 (693)
.+....
T Consensus 121 ~~~~~~ 126 (542)
T PRK07786 121 EAALAP 126 (542)
T ss_pred ccchHH
Confidence 766544
No 233
>PRK06188 acyl-CoA synthetase; Validated
Probab=25.03 E-value=2.5e+02 Score=31.20 Aligned_cols=80 Identities=14% Similarity=0.059 Sum_probs=59.0
Q ss_pred EEecchhHHHHHH---HhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 374 V~~sh~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
..+|.+.+...+. ......++.+++++...++-+.... ..+++++..|+..+..+.......+...++..+++.+.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVL-MAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 3567777654333 3334567889999988876665443 34668888999999888766778888999999999998
Q ss_pred echH
Q 005501 451 TVPS 454 (693)
Q Consensus 451 ~~P~ 454 (693)
..+.
T Consensus 115 ~~~~ 118 (524)
T PRK06188 115 VDPA 118 (524)
T ss_pred Eecc
Confidence 8776
No 234
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.86 E-value=2.9e+02 Score=31.01 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=57.3
Q ss_pred EecchhHHHHHHHhc---h-hcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEe
Q 005501 375 PWTQLSSIRCTAEGW---A-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (693)
Q Consensus 375 ~~sh~~l~~~~~~~~---~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~ 450 (693)
.+|...+........ . ..++.+++++..+++-.... +..+|+++..|+..+.++.....+.+...+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 467776644433332 2 35788999998876655333 344678888999999888766778899999999999988
Q ss_pred echHH
Q 005501 451 TVPSL 455 (693)
Q Consensus 451 ~~P~~ 455 (693)
+.+..
T Consensus 127 ~~~~~ 131 (560)
T PRK08974 127 IVSNF 131 (560)
T ss_pred Eeccc
Confidence 76544
No 235
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=24.76 E-value=2.1e+02 Score=32.47 Aligned_cols=74 Identities=12% Similarity=-0.011 Sum_probs=49.8
Q ss_pred CccccCCeeeehHHHHHHHhccCcccceeEEEeecCCCC-CceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCC
Q 005501 613 DTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG-GPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP 687 (693)
Q Consensus 613 d~ik~~G~ri~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~-g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~~m~P 687 (693)
.+.+-++.-|.+.+-|....+.+|+|..|.++....... ....+-..|+++.+..++ ..+++.++++|.++-..
T Consensus 306 ~~~rt~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~ls-~~l~~~I~~yL~~rrl~ 380 (611)
T PHA02553 306 RMREAQRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLYLT-DVQKEDIKNYLKKYNVA 380 (611)
T ss_pred HhhhcccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCCCC-HHHHHHHHHHHHhcCcC
Confidence 344455677889999998864589999998775332222 002455666777666666 67888888888887644
No 236
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.64 E-value=5e+02 Score=23.05 Aligned_cols=46 Identities=11% Similarity=0.024 Sum_probs=32.6
Q ss_pred cccchhHHHHHHH-HcCCEEEEecCCCChhhHHHHHHHcCCcEEeec
Q 005501 407 GWVMGPVILFSSF-LNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 407 ~~~~~~~~~~~~L-~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~ 452 (693)
.|+.+...+-..| ..|..++.......++.+.+.+.++++.++.++
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 3777764332223 367777766656677899999999999987765
No 237
>PRK05852 acyl-CoA synthetase; Validated
Probab=24.54 E-value=2.6e+02 Score=31.10 Aligned_cols=76 Identities=14% Similarity=-0.034 Sum_probs=56.0
Q ss_pred EecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+.. .+.......++.++|++..+++-+... +..+|+++..|+..+..+.......+...++..++..+..
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEF-VVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH-HHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 467766643 333444567899999998887666433 3456688889999988887777788999999999998874
No 238
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=24.50 E-value=1.6e+02 Score=31.19 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=42.5
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHHhcCeeEEEee
Q 005501 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 221 ~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (693)
.|-..|... +++||.|.+-. .-+....-|++.+|+.+|.+|-+ ..++.++..+..-. ++|+..
T Consensus 52 Al~~al~~l~~~~gdeVi~p~---~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPA---YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEES---SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHhcCCCcCceEecCC---CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 355556778 99999998864 34566677899999999887764 56788888877555 444443
No 239
>PRK08308 acyl-CoA synthetase; Validated
Probab=23.53 E-value=8.3e+02 Score=25.93 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=66.8
Q ss_pred CCCcEEEEEecCCCCCCcc--eeecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecC
Q 005501 189 EDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIA 264 (693)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~v~~gd~V~i~~~~s~--~~vva~LA~l~aGa~~vpl~ 264 (693)
.++.+|++.... +.+|.. -.+|++.+...+..+...+. +.++|++...+|-.- .++..++..+..|+..+..+
T Consensus 99 ~~~~~~~i~~TS-GtTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSS-GTTGEPKLIRRSWTEIDREIEAYNEALN--CEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECC-CCCCCCcEEEEehHhHHHHHHHHHHhhC--CCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 466777776543 234432 36799888765554443221 678898887776553 45667889999999877664
Q ss_pred CCCCHHHHHHHHHhcCeeEEEeecc
Q 005501 265 DSFAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
. ..++.+...+++.++.+++..+.
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHH
Confidence 4 56778888899999998877653
No 240
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.43 E-value=2.4e+02 Score=30.90 Aligned_cols=78 Identities=6% Similarity=-0.118 Sum_probs=56.5
Q ss_pred EecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+.. .....++.+++++....+-+.. .+..+|+++..|+..+..+.....+.+...++..++..+..
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 4788777554433 3345678889999888776654 33557788888998887776666778888999988888876
Q ss_pred ch
Q 005501 452 VP 453 (693)
Q Consensus 452 ~P 453 (693)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 241
>TIGR01720 NRPS-para261 non-ribosomal peptide synthase domain TIGR01720. This model is 171 amino acids long and contains three very highly conserved regions. At the N-terminus is a nearly invariant lysine (position 11) followed by xxxRxxPxxGxGYG in which the proline and the first glycine are invariant. This is followed approximately 22 residues later by the motif FNYLG. Near the C-terminus of the domain is the sequence TxSD where the serine and aspartate are nearly invariant.
Probab=23.06 E-value=14 Score=32.55 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=27.5
Q ss_pred hCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcc
Q 005501 105 HGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEIS 144 (693)
Q Consensus 105 ~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~ 144 (693)
.++.+...+ |+. .+|++.+++.+...|...|..+.
T Consensus 89 ~~~~l~~~~~~~~-----~~~~~~~i~~l~~~~~~~l~~~~ 124 (153)
T TIGR01720 89 EDGELTLTWSYPT-----QLFSEDTIEQLADRFKEALEALI 124 (153)
T ss_pred ECCeEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHH
Confidence 345566666 776 89999999999999999988763
No 242
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=22.94 E-value=6.6e+02 Score=23.85 Aligned_cols=109 Identities=13% Similarity=-0.010 Sum_probs=0.0
Q ss_pred hhHHHHHHHhchhcCCCCCCEEEEeCCcc--ccchh-HHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEeech--
Q 005501 379 LSSIRCTAEGWAHIDLKVGDVYCWPTNLG--WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP-- 453 (693)
Q Consensus 379 ~~l~~~~~~~~~~~~~~~~d~~l~~~~~~--~~~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~~P-- 453 (693)
+..+..+......-......+++..+..+ |+.|. .....--..|-.++-......++.+.+.++++++.++.++-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHHhcCcCCCC--CCccccEEEeecCCCCcchHHHH
Q 005501 454 ----SLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWL 491 (693)
Q Consensus 454 ----~~l~~l~~~~~~~~~--~l~~lr~v~~gGe~l~~~~~~~~ 491 (693)
..+..+.+....... +.+ +++||.+++.+..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~----i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVK----VMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCe----EEEECCcCCHHHHHHc
No 243
>PRK06060 acyl-CoA synthetase; Validated
Probab=22.57 E-value=3e+02 Score=32.05 Aligned_cols=81 Identities=12% Similarity=-0.033 Sum_probs=58.5
Q ss_pred EecchhHHHH---HHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+... +.......++.+++++..+++-+..+-. .+++++..|+..+..+.......+...+++.++.++..
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~-~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQ-LLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 3788777443 3334455789999999988777655443 46688889998888776666677888888888888877
Q ss_pred chHHH
Q 005501 452 VPSLV 456 (693)
Q Consensus 452 ~P~~l 456 (693)
.....
T Consensus 109 ~~~~~ 113 (705)
T PRK06060 109 SDALR 113 (705)
T ss_pred chHHh
Confidence 65443
No 244
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=22.25 E-value=2.4e+02 Score=30.07 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=39.1
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHHhcCeeEEEee
Q 005501 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 222 lA~~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (693)
+...++.. +++||.|.+-.+. +....-++...|+.++.++.+ ...+.+...+.. +.++|+..
T Consensus 59 L~~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 33345556 8999998875544 444455667889887776543 345667776653 56666644
No 245
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.97 E-value=2.5e+02 Score=31.49 Aligned_cols=81 Identities=12% Similarity=0.010 Sum_probs=58.2
Q ss_pred EecchhHHHHHHHhc---hhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|.+.+...+.... ...++..+|++..+++-+... +..+|+++..|+..+..+.......+...++..+++.+..
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 477777654443333 346788999998877766544 3446788888988887776667788999999999999887
Q ss_pred chHHH
Q 005501 452 VPSLV 456 (693)
Q Consensus 452 ~P~~l 456 (693)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76443
No 246
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=21.96 E-value=2.9e+02 Score=20.80 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=35.5
Q ss_pred eehHHHHHHHhccCcccceeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHh
Q 005501 622 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (693)
Q Consensus 622 i~~~eIE~~L~~~~p~V~~a~Vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~L~~ 683 (693)
-...++...|. ++|+|.+|..+.- . .-+.+.+..+ |.+++.+.+.++|..
T Consensus 10 ~~~~~~~~~l~-~~p~V~~~~~vtG-----~-~d~~~~v~~~-----d~~~l~~~i~~~l~~ 59 (74)
T PF01037_consen 10 DAYDEFAEALA-EIPEVVECYSVTG-----E-YDLILKVRAR-----DMEELEEFIREKLRS 59 (74)
T ss_dssp THHHHHHHHHH-TSTTEEEEEEESS-----S-SSEEEEEEES-----SHHHHHHHHHHTHHT
T ss_pred chHHHHHHHHH-cCCCEEEEEEEeC-----C-CCEEEEEEEC-----CHHHHHHHHHHHhhc
Confidence 34677888884 9999999998752 2 4566666654 457888888776644
No 247
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=21.61 E-value=2.1e+02 Score=24.58 Aligned_cols=22 Identities=27% Similarity=0.256 Sum_probs=18.3
Q ss_pred CccccCCeeeehHHHHHHHhcc
Q 005501 613 DTMNLGGIKTSSVEIERVCDQA 634 (693)
Q Consensus 613 d~ik~~G~ri~~~eIE~~L~~~ 634 (693)
...+++|.++++.+||+.+++.
T Consensus 50 ~~y~Igg~~~SL~dIe~~ILR~ 71 (117)
T PF04784_consen 50 VRYNIGGQRFSLDDIEHGILRG 71 (117)
T ss_pred eEEEECCEEecHHHHHHhhccC
Confidence 4456899999999999998743
No 248
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=21.48 E-value=9e+02 Score=28.21 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCCcEEEEEecCCCCCCcc--eeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCcEEEe
Q 005501 188 KEDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVS 262 (693)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~--s~~~vva~LA~l~aGa~~vp 262 (693)
..++.+|++.... |.+|.. -.+|++.+...+..+.. .. +.++|++...+|- +..+...+++.+..|+..+.
T Consensus 362 ~~~~d~a~i~~TS-GTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 362 QQPEDAALILFTS-GSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCCeEEEEECC-CCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 3567888766543 344443 36888888666554432 23 7899999888775 34455678889999999886
Q ss_pred cCCCCCHHHHHHHHHhcCeeEEEeec
Q 005501 263 IADSFAAREIATRLRVSKAKGIFTQD 288 (693)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~ 288 (693)
.+.......+...+++.++..+....
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchH
Confidence 65434456677788888888776654
No 249
>PRK12582 acyl-CoA synthetase; Provisional
Probab=21.46 E-value=3.1e+02 Score=31.40 Aligned_cols=95 Identities=11% Similarity=-0.011 Sum_probs=60.7
Q ss_pred CCCCeEEEEeccCCCCCcceEEecchhHHHHHHH---hchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
.++.+|++....+ +| ..-.+|.+.+...+.. .....++.++|++..+++-+... +..+|+++..|+..+..+.
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH-ALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeccC
Confidence 3455665432211 22 1346788776544433 33456899999999888755433 3446688889998887764
Q ss_pred CCC-----hhhHHHHHHHcCCcEEeec
Q 005501 431 SPL-----ERSFGKFVQDAGVTVLGTV 452 (693)
Q Consensus 431 ~~~-----~~~~~~~i~~~~vt~l~~~ 452 (693)
... .+.+...+++.++..++..
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~ 164 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQ 164 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEec
Confidence 332 2678888888888877764
No 250
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=21.29 E-value=4.9e+02 Score=29.22 Aligned_cols=95 Identities=16% Similarity=-0.017 Sum_probs=65.4
Q ss_pred EEEEeccCCCCCcceEEecchhHHH---HHHHhch-hcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCCh
Q 005501 359 VNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (693)
Q Consensus 359 a~il~TSGSTG~PKgV~~sh~~l~~---~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~ 434 (693)
..|+|-+-.++. -.+|.+.+.. .+..... ..+. ++||++.++|........ ++++.-.|+..+.+-..+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCCCH
Confidence 445665544444 5667766643 3333332 3557 999999999988766543 45777788877766666778
Q ss_pred hhHHHHHHHcCCcEEeechHHHHH
Q 005501 435 RSFGKFVQDAGVTVLGTVPSLVKA 458 (693)
Q Consensus 435 ~~~~~~i~~~~vt~l~~~P~~l~~ 458 (693)
+.+..-|.+-++.++.+....++.
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHccCCCEEEEecccccc
Confidence 899999999999998876665543
No 251
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=21.05 E-value=2.7e+02 Score=29.56 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=38.5
Q ss_pred HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC--C---CCHHHHHHHHHhcCeeEEEee
Q 005501 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD--S---FAAREIATRLRVSKAKGIFTQ 287 (693)
Q Consensus 225 ~L~~~-v~~gd~V~i~~~~s~~~vva~LA~l~aGa~~vpl~p--~---~~~~~l~~~l~~~~~~~il~~ 287 (693)
.+... +++||.|.+-.+..+.. .-++...|+.++.++. + ...+.++..+.. +.++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~~~---~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFVST---ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 34445 78999988866654433 4556778888777653 2 457788877754 56666644
No 252
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=20.87 E-value=44 Score=17.56 Aligned_cols=9 Identities=22% Similarity=0.420 Sum_probs=7.0
Q ss_pred ccccccccc
Q 005501 503 SCGGTELSS 511 (693)
Q Consensus 503 ~YG~TE~~~ 511 (693)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 589998764
No 253
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=20.86 E-value=3.3e+02 Score=30.41 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=56.1
Q ss_pred EecchhHHH---HHHHhchhcCCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecCCCChhhHHHHHHHcCCcEEee
Q 005501 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (693)
Q Consensus 375 ~~sh~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~~~~~~~~~~~i~~~~vt~l~~ 451 (693)
.+|...+.. .+.......++.+++++..+++-+.... ..+++++..|+..+..+.......+...++..++..+..
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHP-INFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 477776643 3333345578999999998887665443 345677888888887776666778999999999988876
Q ss_pred ch
Q 005501 452 VP 453 (693)
Q Consensus 452 ~P 453 (693)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 254
>PRK07638 acyl-CoA synthetase; Validated
Probab=20.71 E-value=7.9e+02 Score=26.73 Aligned_cols=94 Identities=10% Similarity=0.097 Sum_probs=62.7
Q ss_pred CcEEEEEecCCCCCCcce--eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCcEEEecCCC
Q 005501 191 NTVAIVWREDRCDESAVN--LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIADS 266 (693)
Q Consensus 191 d~~Al~~~~~~~~~~~~~--~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~-~vva~LA~l~aGa~~vpl~p~ 266 (693)
+.+|++.... |.+|..+ .+|.+.+...+... .... ++++|++....+-... ++..++..+..|+..+.. +.
T Consensus 143 ~~~a~i~~TS-GtTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~ 217 (487)
T PRK07638 143 NAPFYMGFTS-GSTGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RK 217 (487)
T ss_pred CCcEEEEeCC-CCCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CC
Confidence 4455554432 2444433 56777665544433 2334 7899998877655433 345667778889988865 56
Q ss_pred CCHHHHHHHHHhcCeeEEEeecc
Q 005501 267 FAAREIATRLRVSKAKGIFTQDF 289 (693)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~ 289 (693)
..++++...+++.++.++.+...
T Consensus 218 ~~~~~~~~~i~~~~~t~~~~~P~ 240 (487)
T PRK07638 218 FIPNQVLDKLETENISVMYTVPT 240 (487)
T ss_pred CCHHHHHHHHHHcCCeEEEeCcH
Confidence 78889999999999999988764
No 255
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=20.60 E-value=2.7e+02 Score=25.44 Aligned_cols=84 Identities=15% Similarity=0.176 Sum_probs=52.4
Q ss_pred HHHcCCEEEEecCCCChhhHHHHHHHc-CCcEEeechHHHHHHHhcCcCCCCCCccccEEEeecCCCCcc-------hHH
Q 005501 418 SFLNGATLALYQGSPLERSFGKFVQDA-GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD-------DDL 489 (693)
Q Consensus 418 ~L~~G~~lvi~~~~~~~~~~~~~i~~~-~vt~l~~~P~~l~~l~~~~~~~~~~l~~lr~v~~gGe~l~~~-------~~~ 489 (693)
.+..-+..++++.......+++.|.+. ++|++--.......|.+. +..+.++.||+.-+.. ..+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 344444555555555556777877777 788887777777777654 3688899999765432 233
Q ss_pred HHHhhCCCCceecccccccc
Q 005501 490 WLSSKAWYNAIIESCGGTEL 509 (693)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~ 509 (693)
.+++...+.-++..-|-++-
T Consensus 87 ~l~~~~~d~afi~~~gi~~~ 106 (161)
T PF00455_consen 87 ALRQFRFDKAFIGADGISEE 106 (161)
T ss_pred HHHhhccceEEecccEecCC
Confidence 44443334556666666653
No 256
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=20.49 E-value=4.8e+02 Score=32.39 Aligned_cols=99 Identities=8% Similarity=-0.032 Sum_probs=69.2
Q ss_pred CCCCCeEEEEeccCCCCCcceEEecchhHHHHHHHhchhc--CCCCCCEEEEeCCccccchhHHHHHHHHcCCEEEEecC
Q 005501 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (693)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lvi~~~ 430 (693)
..++++|.+.. +| -.+|.+.+...+......+ .+.++|++...++-+...- ..+++++..|+..+..+.
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGA-LANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHH-HHHHHHHHcCCEEEEeCC
Confidence 35777777532 22 1467777654433332221 3688999988887775544 346688899999888876
Q ss_pred CCChhhHHHHHHHcCCcEEeechHHHHHHH
Q 005501 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (693)
Q Consensus 431 ~~~~~~~~~~i~~~~vt~l~~~P~~l~~l~ 460 (693)
...++++...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 667789999999999999998887776654
No 257
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=20.46 E-value=2.3e+02 Score=26.60 Aligned_cols=43 Identities=9% Similarity=0.193 Sum_probs=29.2
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCC-CEEEEEcCCCHHHHHHHH
Q 005501 209 LMTYKELREQVMLVANALDTM-FSKG-DAIAIDMPMTVRAVIIYL 251 (693)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~g-d~V~i~~~~s~~~vva~L 251 (693)
-+|..|+.+++.++|..+.+. -..| ..|.++..++-..+++.|
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L 52 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADL 52 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHH
Confidence 589999999999999999987 4323 244455444444444443
Done!